BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005355
(700 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 172/293 (58%), Gaps = 4/293 (1%)
Query: 376 KTKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIE-QFI 434
+ K F+ EL++A+DNF+ ILG+GG G VYKG L +G +VA+K+ K E QF
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 435 NEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTE-EFPITWEIRLR 493
EV ++S HRN+++L G C+ LLVY ++ NG++ + ++ E + P+ W R R
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553
IA+ + L YLH I HRD+K+ANILLD+++ A V DFG ++ + H+ V
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP--IRSTDSEEDKSLVGYFLEA 611
+GT G++ PEY + + +EK+DV+ +GV+L+EL+TGQ+ + +++D L+ +
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664
+KE +L ++D + K+EE+ + +A C +RP M E L G
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 170/293 (58%), Gaps = 4/293 (1%)
Query: 376 KTKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIE-QFI 434
+ K F+ EL++A+DNF ILG+GG G VYKG L +G +VA+K+ K E QF
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 435 NEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTE-EFPITWEIRLR 493
EV ++S HRN+++L G C+ LLVY ++ NG++ + ++ E + P+ W R R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553
IA+ + L YLH I HRD+K+ANILLD+++ A V DFG ++ + H+ V
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP--IRSTDSEEDKSLVGYFLEA 611
+G G++ PEY + + +EK+DV+ +GV+L+EL+TGQ+ + +++D L+ +
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664
+KE +L ++D + K+EE+ + +A C +RP M E L G
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 166/282 (58%), Gaps = 5/282 (1%)
Query: 383 MELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
++LE AT+NF+ ++G G G VYKG+L +G VA+K+ IE+F E+ LS
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-DQTEEFPITWEIRLRIAIEVSDA 501
H ++V L+G C E +L+Y+++ NG L ++++ ++WE RL I I +
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS-VMIDQTHLTTRVQGTFGYL 560
L YLH+ A I HRD+KS NILLD+ + K++DFG S+ +DQTHL V+GT GY+
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620
DPEYF + TEKSDVYSFGVVL E+L + I + E +L + +E+ +L ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662
+D + + + E + A +CL + + RP+M + ++L
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 165/282 (58%), Gaps = 5/282 (1%)
Query: 383 MELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
++LE AT+NF+ ++G G G VYKG+L +G VA+K+ IE+F E+ LS
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-DQTEEFPITWEIRLRIAIEVSDA 501
H ++V L+G C E +L+Y+++ NG L ++++ ++WE RL I I +
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS-VMIDQTHLTTRVQGTFGYL 560
L YLH+ A I HRD+KS NILLD+ + K++DFG S+ + QTHL V+GT GY+
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620
DPEYF + TEKSDVYSFGVVL E+L + I + E +L + +E+ +L ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662
+D + + + E + A +CL + + RP+M + ++L
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 163/299 (54%), Gaps = 16/299 (5%)
Query: 380 FTSMELEMATDNFNTNRI------LGQGGQGTVYKGMLTNGRIVAIKKSKLVD---ESNI 430
F+ EL+ T+NF+ I +G+GG G VYKG + N + K + +VD E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
+QF E+ ++++ H N+V+LLG + + LVY ++PNG+L + P++W +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR-SVMIDQTHL 549
R +IA ++ + +LH I HRDIKSANILLD+ + AK+SDFG +R S QT +
Sbjct: 135 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL 609
+R+ GT Y+ PE R + T KSD+YSFGVVL+E++TG P E L
Sbjct: 192 XSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGL-PAVDEHREPQLLLDIKEE 249
Query: 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668
+E + + +D + + +A + + +A +CL+ KRP +K+ L + AS
Sbjct: 250 IEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 16/299 (5%)
Query: 380 FTSMELEMATDNFNTNRI------LGQGGQGTVYKGMLTNGRIVAIKKSKLVD---ESNI 430
F+ EL+ T+NF+ I +G+GG G VYKG + N + K + +VD E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
+QF E+ ++++ H N+V+LLG + + LVY ++PNG+L + P++W +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR-SVMIDQTHL 549
R +IA ++ + +LH I HRDIKSANILLD+ + AK+SDFG +R S QT +
Sbjct: 135 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL 609
R+ GT Y+ PE R + T KSD+YSFGVVL+E++TG P E L
Sbjct: 192 XXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGL-PAVDEHREPQLLLDIKEE 249
Query: 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668
+E + + +D + + +A + + +A +CL+ KRP +K+ L + AS
Sbjct: 250 IEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 16/299 (5%)
Query: 380 FTSMELEMATDNFNTNRI------LGQGGQGTVYKGMLTNGRIVAIKKSKLVD---ESNI 430
F+ EL+ T+NF+ I +G+GG G VYKG + N + K + +VD E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
+QF E+ ++++ H N+V+LLG + + LVY ++PNG+L + P++W +
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR-SVMIDQTHL 549
R +IA ++ + +LH I HRDIKSANILLD+ + AK+SDFG +R S Q +
Sbjct: 129 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL 609
R+ GT Y+ PE R + T KSD+YSFGVVL+E++TG P E L
Sbjct: 186 XXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGL-PAVDEHREPQLLLDIKEE 243
Query: 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668
+E + + +D + + +A + + +A +CL+ KRP +K+ L + AS
Sbjct: 244 IEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 150/288 (52%), Gaps = 16/288 (5%)
Query: 380 FTSMELEMATDNFNTNRI------LGQGGQGTVYKGMLTNGRIVAIKKSKLVD---ESNI 430
F+ EL+ T+NF+ I G+GG G VYKG + N + K + +VD E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
+QF E+ + ++ H N+V+LLG + + LVY + PNG+L + P++W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR-SVMIDQTHL 549
R +IA ++ + +LH I HRDIKSANILLD+ + AK+SDFG +R S Q
Sbjct: 126 RCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL 609
+R+ GT Y PE R + T KSD+YSFGVVL+E++TG P E L
Sbjct: 183 XSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGL-PAVDEHREPQLLLDIKEE 240
Query: 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+E + + +D + +A + +A +CL+ KRP +K+
Sbjct: 241 IEDEEKTIEDYIDKKX-NDADSTSVEAXYSVASQCLHEKKNKRPDIKK 287
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 121/220 (55%), Gaps = 7/220 (3%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNV 448
+ N +G G GTV++ +G VA+K D + +F+ EVAI+ ++ H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
V +G + +V E++ G+LY+ +H + RL +A +V+ + YLH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN- 155
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPEYFRS 567
+ PI HR++KS N+L+D KY KV DFG SR + T L+++ GT ++ PE R
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY 607
EKSDVYSFGV+L EL T Q+P + + + + VG+
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF 253
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNV 448
+ N +G G GTV++ +G VA+K D + +F+ EVAI+ ++ H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
V +G + +V E++ G+LY+ +H + RL +A +V+ + YLH+
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN- 155
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS 568
+ PI HRD+KS N+L+D KY KV DFG SR + + GT ++ PE R
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 569 QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY 607
EKSDVYSFGV+L EL T Q+P + + + + VG+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF 253
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 120/227 (52%), Gaps = 24/227 (10%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFI----NEVAIL 440
LE+ I+G GG G VY+ G VA+K ++ + +I Q I E +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+ + H N++ L G CL+ LV EF G L + + + I +I + A++++
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR----IPPDILVNWAVQIAR 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYR--------AKVSDFGASRSVMIDQTHLTTR 552
+ YLH A +PI HRD+KS+NIL+ K K++DFG +R + H TT+
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTK 171
Query: 553 VQ--GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
+ G + ++ PE R+S F++ SDV+S+GV+L ELLTG+ P R D
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 119/221 (53%), Gaps = 24/221 (10%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIKKSKLVDES-------NIEQFINEVA 438
+A + + +G+GG G V+KG L + +VAIK L D ++F EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEV 498
I+S +NH N+VKL G L P +V EF+P G LY + D+ PI W ++LR+ +++
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDI 131
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYR-----AKVSDFGASRSVMIDQTHLTTRV 553
+ + Y+ + PI HRD++S NI L AKV+DFG S+ H + +
Sbjct: 132 ALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ----SVHSVSGL 186
Query: 554 QGTFGYLDPEYFRSSQ--FTEKSDVYSFGVVLVELLTGQKP 592
G F ++ PE + + +TEK+D YSF ++L +LTG+ P
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 119/221 (53%), Gaps = 24/221 (10%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIKKSKLVDES-------NIEQFINEVA 438
+A + + +G+GG G V+KG L + +VAIK L D ++F EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEV 498
I+S +NH N+VKL G L P +V EF+P G LY + D+ PI W ++LR+ +++
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDI 131
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYR-----AKVSDFGASRSVMIDQTHLTTRV 553
+ + Y+ + PI HRD++S NI L AKV+DFG S+ H + +
Sbjct: 132 ALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVHSVSGL 186
Query: 554 QGTFGYLDPEYFRSSQ--FTEKSDVYSFGVVLVELLTGQKP 592
G F ++ PE + + +TEK+D YSF ++L +LTG+ P
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 118/221 (53%), Gaps = 24/221 (10%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIKKSKLVDES-------NIEQFINEVA 438
+A + + +G+GG G V+KG L + +VAIK L D ++F EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEV 498
I+S +NH N+VKL G L P +V EF+P G LY + D+ PI W ++LR+ +++
Sbjct: 76 IMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDI 131
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYR-----AKVSDFGASRSVMIDQTHLTTRV 553
+ + Y+ + PI HRD++S NI L AKV+DF S+ H + +
Sbjct: 132 ALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ----SVHSVSGL 186
Query: 554 QGTFGYLDPEYFRSSQ--FTEKSDVYSFGVVLVELLTGQKP 592
G F ++ PE + + +TEK+D YSF ++L +LTG+ P
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 118/207 (57%), Gaps = 14/207 (6%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKFL--- 150
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM---IDQTHLTTRVQGTFGYLDPEYF 565
AS HRD+ + N +LD+K+ KV+DFG +R ++ D H T + ++ E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 117/207 (56%), Gaps = 14/207 (6%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKFL--- 208
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM---IDQTHLTTRVQGTFGYLDPEYF 565
AS HRD+ + N +LD+K+ KV+DFG +R + D H T + ++ E
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 117/207 (56%), Gaps = 14/207 (6%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKFL--- 154
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM---IDQTHLTTRVQGTFGYLDPEYF 565
AS HRD+ + N +LD+K+ KV+DFG +R + D H T + ++ E
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 117/207 (56%), Gaps = 14/207 (6%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKFL--- 149
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM---IDQTHLTTRVQGTFGYLDPEYF 565
AS HRD+ + N +LD+K+ KV+DFG +R + D H T + ++ E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 117/207 (56%), Gaps = 14/207 (6%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKFL--- 150
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM---IDQTHLTTRVQGTFGYLDPEYF 565
AS HRD+ + N +LD+K+ KV+DFG +R + D H T + ++ E
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 117/207 (56%), Gaps = 14/207 (6%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKFL--- 149
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM---IDQTHLTTRVQGTFGYLDPEYF 565
AS HRD+ + N +LD+K+ KV+DFG +R + D H T + ++ E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 117/207 (56%), Gaps = 14/207 (6%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKFL--- 147
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM---IDQTHLTTRVQGTFGYLDPEYF 565
AS HRD+ + N +LD+K+ KV+DFG +R + D H T + ++ E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 167
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 7/204 (3%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457
+G G G V+ G N VAIK + S E FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRD 517
LV+EF+ +G L Y+ Q F E L + ++V + + YL A+ I HRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEASVI---HRD 128
Query: 518 IKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVY 577
+ + N L+ + KVSDFG +R V+ DQ +T + + PE F S+++ KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 578 SFGVVLVELLT-GQKPIRSTDSEE 600
SFGV++ E+ + G+ P + + E
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 148
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 149
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 141
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 8/235 (3%)
Query: 380 FTSME-LEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVA 438
F SM+ EM + LG G G VY G+ + K+ D +E+F+ E A
Sbjct: 21 FQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 80
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEV 498
++ +I H N+V+LLG C +V E++P G L Y+ + E +T + L +A ++
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE-EVTAVVLLYMATQI 139
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
S A+ YL I HRD+ + N L+ + + KV+DFG SR + D +
Sbjct: 140 SSAMEYLEKKNFI---HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK 196
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV--GYFLE 610
+ PE + F+ KSDV++FGV+L E+ T G P D + L+ GY +E
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRME 251
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 12/204 (5%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVK 450
++G+G G V K + VAIK+ + ES + FI E+ LS++NH N+VK
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIVK 65
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPI-TWEIRLRIAIEVSDALCYLHSAA 509
L G CL LV E+ G+LY +H E P T + ++ S + YLHS
Sbjct: 66 LYGACLNPVC--LVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 510 SIPIYHRDIKSANILL-DDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS 568
+ HRD+K N+LL K+ DFG + + QTH+T +G+ ++ PE F S
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGS 178
Query: 569 QFTEKSDVYSFGVVLVELLTGQKP 592
++EK DV+S+G++L E++T +KP
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKP 202
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 147
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 168
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 149
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 109/204 (53%), Gaps = 12/204 (5%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVK 450
++G+G G V K + VAIK+ + ES + FI E+ LS++NH N+VK
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIVK 66
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPI-TWEIRLRIAIEVSDALCYLHSAA 509
L G CL LV E+ G+LY +H E P T + ++ S + YLHS
Sbjct: 67 LYGACLNPVC--LVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 510 SIPIYHRDIKSANILL-DDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS 568
+ HRD+K N+LL K+ DFG + + QTH+T +G+ ++ PE F S
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEGS 179
Query: 569 QFTEKSDVYSFGVVLVELLTGQKP 592
++EK DV+S+G++L E++T +KP
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKP 203
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 148
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 146
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGRIV--AIKK-SKLVDESNIEQFINEVAILSQINHRNVV 449
N ++G+G G VY G L +G+ + A+K +++ D + QF+ E I+ +H NV+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 450 KLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
LLG CL +E PL+V ++ +G L +I ++T P ++ + ++V+ + YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN-PTVKDL-IGFGLQVAKGMKYL--- 144
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ----THLTTRVQGTFGYLDPEY 564
AS HRD+ + N +LD+K+ KV+DFG +R M D+ H T + ++ E
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ +FT KSDV+SFGV+L EL+T P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457
+G G G V+ G N VAIK + S E FI E ++ +++H +V+L G CLE
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRD 517
LV+EF+ +G L Y+ Q F E L + ++V + + YL A I HRD
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEACVI---HRD 131
Query: 518 IKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVY 577
+ + N L+ + KVSDFG +R V+ DQ +T + + PE F S+++ KSDV+
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 578 SFGVVLVELLT-GQKPIRSTDSEE 600
SFGV++ E+ + G+ P + + E
Sbjct: 192 SFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457
+G G G V+ G N VAIK K S + FI E ++ +++H +V+L G CLE
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRD 517
LV+EF+ +G L Y+ Q F E L + ++V + + YL A I HRD
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEACVI---HRD 148
Query: 518 IKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVY 577
+ + N L+ + KVSDFG +R V+ DQ +T + + PE F S+++ KSDV+
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 578 SFGVVLVELLT-GQKPIRSTDSEE 600
SFGV++ E+ + G+ P + + E
Sbjct: 209 SFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457
+G G G V+ G N VAIK + S E FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRD 517
LV+EF+ +G L Y+ Q F E L + ++V + + YL A I HRD
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEACVI---HRD 128
Query: 518 IKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVY 577
+ + N L+ + KVSDFG +R V+ DQ +T + + PE F S+++ KSDV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 578 SFGVVLVELLT-GQKPIRSTDSEE 600
SFGV++ E+ + G+ P + + E
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457
+G G G V+ G N VAIK + S E FI E ++ +++H +V+L G CLE
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRD 517
LV+EF+ +G L Y+ Q F E L + ++V + + YL A I HRD
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEACVI---HRD 126
Query: 518 IKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVY 577
+ + N L+ + KVSDFG +R V+ DQ +T + + PE F S+++ KSDV+
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 578 SFGVVLVELLT-GQKPIRSTDSEE 600
SFGV++ E+ + G+ P + + E
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 23/291 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + ++ + L +A ++S A+
Sbjct: 65 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 123
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 124 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP----------------SQVYELLE 224
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGD 671
E E V L + C RP+ E AFE +SI D
Sbjct: 225 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + ++ + L +A ++S A+
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 125
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 126 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 226
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + ++ + L +A ++S A+
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 123
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 124 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE 180
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP----------------SQVYELLE 224
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 225 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + ++ + L +A ++S A+
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 130
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 131 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 231
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 284
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + ++ + L +A ++S A+
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 125
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 126 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 226
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 64
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + ++ + L +A ++S A+
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 123
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 124 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP----------------SQVYELLE 224
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 225 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 277
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 67
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 68 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 126
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 127 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 183
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 227
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 228 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 280
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + ++ + L +A ++S A+
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 125
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 126 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 226
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + ++ + L +A ++S A+
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 125
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 126 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 226
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 279
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 127
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 128 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 184
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 228
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 229 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 281
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 8 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 67
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 68 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 126
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 127 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 183
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 227
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 228 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 280
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 20 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 79
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 80 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 138
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 139 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 195
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 196 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 239
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 240 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 292
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 127
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 128 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 228
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 229 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 281
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 9 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 68
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 127
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 128 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 228
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 229 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 281
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 130
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 131 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 231
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 284
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 273
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + ++ + L +A ++S A+
Sbjct: 274 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAME 332
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HR++ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 333 YLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 390 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 433
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 434 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 486
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 7/204 (3%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457
+G G G V+ G N VAIK + S E FI E ++ +++H +V+L G CLE
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRD 517
LV EF+ +G L Y+ Q F E L + ++V + + YL A I HRD
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA--ETLLGMCLDVCEGMAYLEEACVI---HRD 129
Query: 518 IKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVY 577
+ + N L+ + KVSDFG +R V+ DQ +T + + PE F S+++ KSDV+
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 578 SFGVVLVELLT-GQKPIRSTDSEE 600
SFGV++ E+ + G+ P + + E
Sbjct: 190 SFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 312
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 313 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 371
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HR++ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 372 YLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 428
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 429 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 472
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 473 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 525
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 23/293 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 211 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 270
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 271 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 329
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HR++ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 330 YLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 386
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 387 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 430
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFELGGIRASIGDSI 673
E E V L + C RP+ E AFE +SI D +
Sbjct: 431 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 483
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 23/281 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 130
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 131 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 187
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 231
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFE 661
E E V L + C RP+ E AFE
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 23/281 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 72 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 130
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 131 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 231
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFE 661
E E V L + C RP+ E AFE
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 23/281 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 70
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 71 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 129
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 130 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 230
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFE 661
E E V L + C RP+ E AFE
Sbjct: 231 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 23/281 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 125
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 126 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 226
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFE 661
E E V L + C RP+ E AFE
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 23/281 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 12 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 71
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 130
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 131 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 187
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 231
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFE 661
E E V L + C RP+ E AFE
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 23/281 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ EM + LG G G VY+G+ + K+ D +E+F+ E A++ +I
Sbjct: 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI 66
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N+V+LLG C ++ EF+ G L Y+ + + + + L +A ++S A+
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAME 125
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+ + N L+ + + KV+DFG SR + D + + PE
Sbjct: 126 YLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
++F+ KSDV++FGV+L E+ T G P D ++++E+L+
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYELLE 226
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE--AAFE 661
E E V L + C RP+ E AFE
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 34/294 (11%)
Query: 396 RILGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVK 450
R LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 451 LLGCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
G C L+ EF+P G+L +Y+ E I L+ ++ + YL +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--IDHIKLLQYTSQICKGMEYLGTK 136
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYF 565
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 137 RYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 192
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENR 616
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 252
Query: 617 LFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 253 RLPRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 10/216 (4%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
+S + E+ + +G G GTVYKG V + ++ F NEV +L
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+ H N++ +G + ++ + V ++ +LY ++H +F + + + IA + +
Sbjct: 75 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTAR 131
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+ +
Sbjct: 132 GMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 560 LDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKP 592
+ PE R S+ ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 137/275 (49%), Gaps = 32/275 (11%)
Query: 396 RILGQGGQGTVYKGM-LTNGRIVAIKKS-KLVDE-----SNIEQFINEVAILSQINHRNV 448
++LG G GTVYKG+ + G V I + K+++E +N+E F++E I++ ++H ++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDHPHL 102
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
V+LLG CL + LV + +P+G L +Y+H+ + I ++ L ++++ + YL
Sbjct: 103 VRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN--IGSQLLLNWCVQIAKGMMYLEER 159
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPEYFRS 567
+ HRD+ + N+L+ K++DFG +R + D+ + ++ E
Sbjct: 160 R---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 216
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626
+FT +SDV+S+GV + EL+T G KP + E L+ K RL +
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE------KGERLPQPPIC--- 267
Query: 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661
I V M+ +C + RP KE A E
Sbjct: 268 -------TIDVYMVMVKCWMIDADSRPKFKELAAE 295
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 125/225 (55%), Gaps = 14/225 (6%)
Query: 384 ELEMATDNFNTNRI-LGQGGQGTVYKGM--LTNGRI-VAIKKSKL-VDESNIEQFINEVA 438
+L + DN I LG G G+V +G+ + +I VAIK K ++++ E+ + E
Sbjct: 3 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 62
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEV 498
I+ Q+++ +V+L+G C + E +LV E G L++++ + EE P++ L +V
Sbjct: 63 IMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL--LHQV 119
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF- 557
S + YL + HRD+ + N+LL +++ AK+SDFG S+++ D ++ T R G +
Sbjct: 120 SMGMKYLEEKNFV---HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 176
Query: 558 -GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
+ PE +F+ +SDV+S+GV + E L+ GQKP + E
Sbjct: 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 137/276 (49%), Gaps = 32/276 (11%)
Query: 396 RILGQGGQGTVYKGM-LTNGRIVAIKKS-KLVDE-----SNIEQFINEVAILSQINHRNV 448
++LG G GTVYKG+ + G V I + K+++E +N+E F++E I++ ++H ++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDHPHL 79
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
V+LLG CL + LV + +P+G L +Y+H+ + I ++ L ++++ + YL
Sbjct: 80 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN--IGSQLLLNWCVQIAKGMMYLEER 136
Query: 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPEYFRS 567
+ HRD+ + N+L+ K++DFG +R + D+ + ++ E
Sbjct: 137 R---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626
+FT +SDV+S+GV + EL+T G KP + E L+ K RL +
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE------KGERLPQPPIC--- 244
Query: 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662
I V M+ +C + RP KE A E
Sbjct: 245 -------TIDVYMVMVKCWMIDADSRPKFKELAAEF 273
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 143/291 (49%), Gaps = 22/291 (7%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
+S + E+ + +G G GTVYKG V + ++ F NEV +L
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVS 499
+ H N++ +G + ++ + V ++ +LY ++H +F + I+L IA + +
Sbjct: 79 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTA 134
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFG 558
+ YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+
Sbjct: 135 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 559 YLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---L 609
++ PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 251
Query: 610 EAMKEN--RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
++ N + + L A LK+ ++E + +LA + ++ + P + +
Sbjct: 252 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA--SIELLARSLPKIHRS 300
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 22/288 (7%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
+S + E+ + +G G GTVYKG V + ++ F NEV +L
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVS 499
+ H N++ +G + ++ + V ++ +LY ++H +F + I+L IA + +
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTA 142
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFG 558
+ YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+
Sbjct: 143 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 559 YLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---L 609
++ PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 259
Query: 610 EAMKEN--RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTM 655
++ N + + L A LK+ ++E + +LA + ++ + P +
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA--SIELLARSLPKI 305
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%), Gaps = 10/216 (4%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
+S + E+ + +G G GTVYKG V + ++ F NEV +L
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+ H N++ +G + ++ + V ++ +LY ++H +F + + + IA + +
Sbjct: 63 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTAR 119
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+ +
Sbjct: 120 GMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 176
Query: 560 LDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKP 592
+ PE R S+ ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 146/281 (51%), Gaps = 19/281 (6%)
Query: 384 ELEMATDNFNTNRI-LGQGGQGTVYKGM--LTNGRI-VAIKKSKL-VDESNIEQFINEVA 438
+L + DN I LG G G+V +G+ + +I VAIK K ++++ E+ + E
Sbjct: 329 KLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQ 388
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEV 498
I+ Q+++ +V+L+G C + E +LV E G L++++ + EE P++ L +V
Sbjct: 389 IMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL--LHQV 445
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF- 557
S + YL + HR++ + N+LL +++ AK+SDFG S+++ D ++ T R G +
Sbjct: 446 SMGMKYLEEKNFV---HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 502
Query: 558 -GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV--GYFLEAMK 613
+ PE +F+ +SDV+S+GV + E L+ GQKP + E + + G +E
Sbjct: 503 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP 562
Query: 614 E--NRLFEVL-DARVLKEAKEEEIITVAMLAKRCLNMIGKK 651
E L+ ++ D + K + +TV + C + K
Sbjct: 563 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ E+ + +G G GTVYKG V + ++ F NEV +L +
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N++ +G ++ + V ++ +LY ++H +F + + + IA + + +
Sbjct: 78 RHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARGMD 134
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGYLDP 562
YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+ ++ P
Sbjct: 135 YLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
Query: 563 EYFR---SSQFTEKSDVYSFGVVLVELLTGQKP 592
E R S+ ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 192 EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 20/274 (7%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
+S + E+ + +G G GTVYKG V + ++ F NEV +L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVS 499
+ H N++ +G + ++ + V ++ +LY ++H +F + I+L IA + +
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTA 119
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFG 558
+ YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 559 YLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---L 609
++ PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 236
Query: 610 EAMKEN--RLFEVLDARVLKEAKEEEIITVAMLA 641
++ N + + L A LK+ ++E + +LA
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ E+ + +G G GTVYKG V + ++ F NEV +L +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVSDAL 502
H N++ +G + ++ + V ++ +LY ++H +F + I+L IA + + +
Sbjct: 62 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTAQGM 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGYLD 561
YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+ ++
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 174
Query: 562 PEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---LEAM 612
PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L +
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 234
Query: 613 KEN--RLFEVLDARVLKEAKEEEIITVAMLA 641
+ N + + L A LK+ ++E + +LA
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 22/288 (7%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
+S + E+ + +G G GTVYKG V + ++ F NEV +L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVS 499
+ H N++ +G + ++ + V ++ +LY ++H +F + I+L IA + +
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTA 119
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFG 558
+ YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+
Sbjct: 120 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 559 YLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---L 609
++ PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 236
Query: 610 EAMKEN--RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTM 655
++ N + + L A LK+ ++E + +LA + ++ + P +
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA--SIELLARSLPKI 282
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 143/291 (49%), Gaps = 22/291 (7%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
+S + E+ + +G G GTVYKG V + ++ F NEV +L
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVS 499
+ H N++ +G + ++ + V ++ +LY ++H +F + I+L IA + +
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTA 116
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFG 558
+ YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+
Sbjct: 117 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 559 YLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---L 609
++ PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 233
Query: 610 EAMKEN--RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
++ N + + L A LK+ ++E + +LA + ++ + P + +
Sbjct: 234 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA--SIELLARSLPKIHRS 282
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 136 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA-PESLTE 191
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 252 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 22/288 (7%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
+S + E+ + +G G GTVYKG V + ++ F NEV +L
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVS 499
+ H N++ +G + ++ + V ++ +LY ++H +F + I+L IA + +
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTA 142
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFG 558
+ YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+
Sbjct: 143 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 559 YLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---L 609
++ PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 259
Query: 610 EAMKEN--RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTM 655
++ N + + L A LK+ ++E + +LA + ++ + P +
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA--SIELLARSLPKI 305
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 142/288 (49%), Gaps = 22/288 (7%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
+S + E+ + +G G GTVYKG V + ++ F NEV +L
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVS 499
+ H N++ +G + ++ + V ++ +LY ++H +F + I+L IA + +
Sbjct: 86 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTA 141
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFG 558
+ YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+
Sbjct: 142 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 559 YLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---L 609
++ PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 258
Query: 610 EAMKEN--RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTM 655
++ N + + L A LK+ ++E + +LA + ++ + P +
Sbjct: 259 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILA--SIELLARSLPKI 304
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ E+ + +G G GTVYKG V + ++ F NEV +L +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVSDAL 502
H N++ +G + ++ + V ++ +LY ++H +F + I+L IA + + +
Sbjct: 62 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTAQGM 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGYLD 561
YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+ ++
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 562 PEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---LEAM 612
PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L +
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 234
Query: 613 KEN--RLFEVLDARVLKEAKEEEIITVAMLA 641
+ N + + L A LK+ ++E + +LA
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 136 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 191
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 252 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT---FGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 143 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 198
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 199 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 258
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 259 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 301
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT---FGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 141 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 196
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 197 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 256
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 257 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 299
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 167 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 222
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 282
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR +
Sbjct: 283 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 139
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 140 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 195
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 196 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 255
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 256 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 298
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT---FGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 139 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 194
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 255 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 154 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 209
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 210 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 269
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 270 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 312
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 136 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 191
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 251
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 252 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 134
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 135 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 190
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 191 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 250
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 251 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 34/291 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 154 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 209
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 210 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 269
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 270 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 142 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 197
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 198 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 257
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 258 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 300
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 139 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 194
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 254
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 255 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 133
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HRD+ + NIL++++ R K+ DFG ++ + D+ + G F Y PE
Sbjct: 134 I---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTE 189
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 190 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 249
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR +
Sbjct: 250 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 292
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 20/271 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ E+ + +G G GTVYKG V + ++ F NEV +L +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL-RIAIEVSDAL 502
H N++ +G ++ + V ++ +LY ++H +F + I+L IA + + +
Sbjct: 62 RHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHIIETKFEM---IKLIDIARQTAQGM 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGYLD 561
YLH+ + I HRD+KS NI L + K+ DFG A+ +H ++ G+ ++
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 562 PEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV---GYF---LEAM 612
PE R + ++ +SDVY+FG+VL EL+TGQ P + ++ + + GY L +
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV 234
Query: 613 KEN--RLFEVLDARVLKEAKEEEIITVAMLA 641
+ N + + L A LK+ ++E + +LA
Sbjct: 235 RSNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 118/208 (56%), Gaps = 16/208 (7%)
Query: 395 NRILGQGGQGTVYKGML--TNGR---IVAIK--KSKLVDESNIEQFINEVAILSQINHRN 447
+++G G G VYKGML ++G+ VAIK K+ ++ ++ F+ E I+ Q +H N
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHN 107
Query: 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
+++L G + + +++ E++ NG L +++ ++ EF + + + I + + YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI--AAGMKYL-- 163
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID--QTHLTTRVQGTFGYLDPEYF 565
A++ HRD+ + NIL++ KVSDFG SR + D T+ T+ + + PE
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 566 RSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+FT SDV+SFG+V+ E++T G++P
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 138/292 (47%), Gaps = 34/292 (11%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+KK + E ++ F E+ IL + H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G C L+ E++P G+L Y+ E I L+ ++ + YL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLGTKRY 136
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEYFRS 567
I HR++ + NIL++++ R K+ DFG ++ + D+ + + G F Y PE
Sbjct: 137 I---HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA-PESLTE 192
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---------EDKSLVGYFLEAMKENRLF 618
S+F+ SDV+SFGVVL EL T + +S +E + + +V + +E +K N
Sbjct: 193 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 252
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670
D +E + M+ C N +RP+ ++ A + IR ++
Sbjct: 253 PRPDG-----CPDE----IYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 295
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDES--NIEQFINEVAILSQINHRNVVKLLGCC 455
+G G GTVYKG VA+K K+VD + + F NEVA+L + H N++ +G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ + +V ++ +LY+++H Q +F + I IA + + + YLH+ I H
Sbjct: 102 TKDNLA-IVTQWCEGSSLYKHLHVQETKFQMFQLI--DIARQTAQGMDYLHAKN---IIH 155
Query: 516 RDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGYLDPEYFR---SSQFT 571
RD+KS NI L + K+ DFG A+ + + G+ ++ PE R ++ F+
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 572 EKSDVYSFGVVLVELLTGQKP 592
+SDVYS+G+VL EL+TG+ P
Sbjct: 216 FQSDVYSYGIVLYELMTGELP 236
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 118/217 (54%), Gaps = 19/217 (8%)
Query: 393 NTNRILGQGGQGTVYKGMLTN---GRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRN 447
+++R++G+G G VY G + RI AIK S++ + +E F+ E ++ +NH N
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 448 VVKLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
V+ L+G L E +P ++ ++ +G L Q+I + P ++ + ++V+ + YL
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVKDL-ISFGLQVARGMEYL- 140
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID-----QTHLTTRVQGTFGYLD 561
A HRD+ + N +LD+ + KV+DFG +R ++ Q H R+ + L
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL- 197
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTD 597
E ++ +FT KSDV+SFGV+L ELLT G P R D
Sbjct: 198 -ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID 233
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGCC 455
LG G G V G VAIK ++ E ++ ++FI E ++ ++H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ ++ E++ NG L Y+ + F + L + +V +A+ YL S + H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 143
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RD+ + N L++D+ KVSDFG SR V+ D+ + + + PE S+F+ KSD
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 576 VYSFGVVLVELLT-GQKPI-RSTDSE 599
+++FGV++ E+ + G+ P R T+SE
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGCC 455
LG G G V G VAIK ++ E ++ ++FI E ++ ++H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ ++ E++ NG L Y+ + F + L + +V +A+ YL S + H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 143
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RD+ + N L++D+ KVSDFG SR V+ D+ + + + PE S+F+ KSD
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 576 VYSFGVVLVELLT-GQKPI-RSTDSE 599
+++FGV++ E+ + G+ P R T+SE
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGCC 455
LG G G V G VAIK ++ E ++ ++FI E ++ ++H +V+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ ++ E++ NG L Y+ + F + L + +V +A+ YL S + H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 134
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RD+ + N L++D+ KVSDFG SR V+ D+ + + + PE S+F+ KSD
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 194
Query: 576 VYSFGVVLVELLT-GQKPI-RSTDSE 599
+++FGV++ E+ + G+ P R T+SE
Sbjct: 195 IWAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGCC 455
LG G G V G VAIK ++ E ++ ++FI E ++ ++H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ ++ E++ NG L Y+ + F + L + +V +A+ YL S + H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 128
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RD+ + N L++D+ KVSDFG SR V+ D+ + + + PE S+F+ KSD
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 576 VYSFGVVLVELLT-GQKPI-RSTDSE 599
+++FGV++ E+ + G+ P R T+SE
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 15/226 (6%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTNGR----IVAIKKSKL-VDESNIEQFINEVAILS 441
+A ++ NRILG+G G VY+G+ TN + VA+K K N E+F++E I+
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
++H ++VKL+G +E E ++ E P G L Y+ + + ++++ A
Sbjct: 81 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKA 137
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
+ YL S + HRDI NIL+ K+ DFG SR + + + + + ++
Sbjct: 138 MAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 194
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVG 606
PE +FT SDV+ F V + E+L+ G++P E+K ++G
Sbjct: 195 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL---ENKDVIG 237
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 15/226 (6%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTNGR----IVAIKKSKL-VDESNIEQFINEVAILS 441
+A ++ NRILG+G G VY+G+ TN + VA+K K N E+F++E I+
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
++H ++VKL+G +E E ++ E P G L Y+ + + ++++ A
Sbjct: 65 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKA 121
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
+ YL S + HRDI NIL+ K+ DFG SR + + + + + ++
Sbjct: 122 MAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 178
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVG 606
PE +FT SDV+ F V + E+L+ G++P E+K ++G
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL---ENKDVIG 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 15/226 (6%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTNGR----IVAIKKSKL-VDESNIEQFINEVAILS 441
+A ++ NRILG+G G VY+G+ TN + VA+K K N E+F++E I+
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
++H ++VKL+G +E E ++ E P G L Y+ + + ++++ A
Sbjct: 69 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL--TLVLYSLQICKA 125
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
+ YL S + HRDI NIL+ K+ DFG SR + + + + + ++
Sbjct: 126 MAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMS 182
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVG 606
PE +FT SDV+ F V + E+L+ G++P E+K ++G
Sbjct: 183 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL---ENKDVIG 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGCC 455
LG G G V G VAIK ++ E ++ ++FI E ++ ++H +V+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ ++ E++ NG L Y+ + F + L + +V +A+ YL S + H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 127
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RD+ + N L++D+ KVSDFG SR V+ D+ + + + PE S+F+ KSD
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 187
Query: 576 VYSFGVVLVELLT-GQKPI-RSTDSE 599
+++FGV++ E+ + G+ P R T+SE
Sbjct: 188 IWAFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGCC 455
LG G G V G VAIK ++ E ++ ++FI E ++ ++H +V+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ ++ E++ NG L Y+ + F + L + +V +A+ YL S + H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 123
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RD+ + N L++D+ KVSDFG SR V+ D+ + + + PE S+F+ KSD
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 576 VYSFGVVLVELLT-GQKPI-RSTDSE 599
+++FGV++ E+ + G+ P R T+SE
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 12/206 (5%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGCC 455
LG G G V G VAIK ++ E ++ ++FI E ++ ++H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ ++ E++ NG L Y+ + F + L + +V +A+ YL S + H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESKQFL---H 128
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RD+ + N L++D+ KVSDFG SR V+ D+ + + + PE S+F+ KSD
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 576 VYSFGVVLVELLT-GQKPI-RSTDSE 599
+++FGV++ E+ + G+ P R T+SE
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 19/232 (8%)
Query: 376 KTKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIE 431
K K S + + A ++F R LG+G G VY + I+A+K K++L
Sbjct: 20 KQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 79
Query: 432 QFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITW 488
Q EV I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 489 EIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548
E+++AL Y HS I HRDIK N+LL K++DFG S V +
Sbjct: 140 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 188
Query: 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
TT + GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 189 RTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 118
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S V + TT +
Sbjct: 119 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LC 172
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 21/234 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNIEQFIN 435
E E+A + +R LGQG G VY+G + G + VAIK ++ +F+N
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF-------PITW 488
E +++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 489 EIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-IDQT 547
+++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R + D
Sbjct: 123 SKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
+ ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 233
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNI 430
+F E E+A + +R LGQG G VY+G + G + VAIK ++
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------ 484
+F+NE +++ + N +VV+LLG + + L++ E + G L Y+ E
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 485 -PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
P + +++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 544 -IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
D + ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 239
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 21/234 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNIEQFIN 435
E E+A + +R LGQG G VY+G + G + VAIK ++ +F+N
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF-------PITW 488
E +++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 489 EIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-IDQT 547
+++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R + D
Sbjct: 132 SKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
+ ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 19/232 (8%)
Query: 376 KTKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIE 431
K K S + + A ++F R LG+G G VY + I+A+K K++L
Sbjct: 11 KQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 70
Query: 432 QFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITW 488
Q EV I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 130
Query: 489 EIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548
E+++AL Y HS I HRDIK N+LL K++DFG S V +
Sbjct: 131 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSR 179
Query: 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
TT + GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 180 RTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 230
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 118
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S V + TT +
Sbjct: 119 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LC 172
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 19/225 (8%)
Query: 383 MELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVA 438
M+ + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 1 MKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIA 495
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
E+++AL Y HS I HRDIK N+LL K++DFG S + + T + G
Sbjct: 115 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCG 168
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
T YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S V + TT +
Sbjct: 117 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LC 170
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 117
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S V + TT + GT
Sbjct: 118 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLD 171
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLV----DESNIEQFINEVAILSQINHRNVVKLLG 453
LG GG TVY T I K+ + E +++F EV SQ++H+N+V ++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 454 CCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPI 513
E + LV E+I TL +YI P++ + + ++ D + + H + I
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHD---MRI 132
Query: 514 YHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEK 573
HRDIK NIL+D K+ DFG ++++ T V GT Y PE + E
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 574 SDVYSFGVVLVELLTGQKP 592
+D+YS G+VL E+L G+ P
Sbjct: 193 TDIYSIGIVLYEMLVGEPP 211
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P G +Y+ + + E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ 118
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S V + TT +
Sbjct: 119 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LC 172
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S V + TT +
Sbjct: 117 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LC 170
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 121
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S V + TT + GT
Sbjct: 122 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLD 175
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 116
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S V + TT + GT
Sbjct: 117 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLD 170
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNI 430
++ E E+A + +R LGQG G VY+G + G + VAIK ++
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------ 484
+F+NE +++ + N +VV+LLG + + L++ E + G L Y+ E
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 485 -PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
P + +++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 544 -IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
D + ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 184 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 21/234 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNIEQFIN 435
E E+A + +R LGQG G VY+G + G + VAIK ++ +F+N
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF-------PITW 488
E +++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 489 EIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-IDQT 547
+++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R + D
Sbjct: 125 SKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
+ ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 117
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S + + T + GT
Sbjct: 118 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLD 171
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNI 430
++ E E+A + +R LGQG G VY+G + G + VAIK ++
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------ 484
+F+NE +++ + N +VV+LLG + + L++ E + G L Y+ E
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 485 -PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
P + +++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 544 -IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
D + ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 118
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S + + T +
Sbjct: 119 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLC 172
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNI 430
++ E E+A + +R LGQG G VY+G + G + VAIK ++
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------ 484
+F+NE +++ + N +VV+LLG + + L++ E + G L Y+ E
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 485 -PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
P + +++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R +
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 544 -IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
D + ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 270
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 114
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S + + T +
Sbjct: 115 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLC 168
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 118
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S + T + GT
Sbjct: 119 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLSGTLD 172
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNI 430
++ E E+A + +R LGQG G VY+G + G + VAIK ++
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------ 484
+F+NE +++ + N +VV+LLG + + L++ E + G L Y+ E
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 485 -PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
P + +++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 544 -IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
D + ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 119/239 (49%), Gaps = 21/239 (8%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNI 430
++ E E+A + +R LGQG G VY+G + G + VAIK ++
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------ 484
+F+NE +++ + N +VV+LLG + + L++ E + G L Y+ E
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 485 -PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
P + +++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 544 -IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
D + ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 114
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S V + TT + GT
Sbjct: 115 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLD 168
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 117
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S + + T + GT
Sbjct: 118 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLD 171
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 115
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K+++FG S V + TT +
Sbjct: 116 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-LC 169
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 117
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S + + T + GT
Sbjct: 118 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLD 171
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K+++FG S V + TT +
Sbjct: 117 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-LC 170
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY N + I+A+K K++L Q EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G ++ L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 117
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S + + + GT
Sbjct: 118 ANALSYCHSKKVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLD 171
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
YL PE EK D++S GV+ E L G+ P +
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 114
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S V + T +
Sbjct: 115 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDT-LC 168
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P G +Y+ + + E+ T+
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ 118
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S + + +
Sbjct: 119 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLX 172
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNI 430
++ E E+A + +R LGQG G VY+G + G + VAIK ++
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 59
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------ 484
+F+NE +++ + N +VV+LLG + + L++ E + G L Y+ E
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 485 -PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
P + +++A E++D + YL++ + HRD+ + N + + + K+ DFG +R +
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 544 -IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
D + ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 398 LGQGGQGTVYKGMLTN------GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451
LG+G G V+ N +VA+K K ES + F E +L+ + H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------------PITWEIRLRIAIEVS 499
G C E L+V+E++ +G L +++ + P+ L +A +V+
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-IDQTHLTTRVQGTFG 558
+ YL A + HRD+ + N L+ K+ DFG SR + D + R
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
++ PE +FT +SDV+SFGVVL E+ T G++P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 115
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S + + +
Sbjct: 116 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLC 169
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 27/236 (11%)
Query: 376 KTKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIE 431
K K S + + A ++F R LG+G G VY + I+A+K K++L
Sbjct: 20 KQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 79
Query: 432 QFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITW 488
Q EV I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 139
Query: 489 EIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548
E+++AL Y HS I HRDIK N+LL K++DFG S H
Sbjct: 140 ------ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS-------VH 183
Query: 549 LTTRVQ----GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 184 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 398 LGQGGQGTVYKGMLTN------GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451
LG+G G V+ N +VA+K K ES + F E +L+ + H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------------PITWEIRLRIAIEVS 499
G C E L+V+E++ +G L +++ + P+ L +A +V+
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-IDQTHLTTRVQGTFG 558
+ YL A + HRD+ + N L+ K+ DFG SR + D + R
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
++ PE +FT +SDV+SFGVVL E+ T G++P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 398 LGQGGQGTVYKGMLTN------GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451
LG+G G V+ N +VA+K K ES + F E +L+ + H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------------PITWEIRLRIAIEVS 499
G C E L+V+E++ +G L +++ + P+ L +A +V+
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-IDQTHLTTRVQGTFG 558
+ YL A + HRD+ + N L+ K+ DFG SR + D + R
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
++ PE +FT +SDV+SFGVVL E+ T G++P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 120
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S + + + GT
Sbjct: 121 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLD 174
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ ++F+ R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITEL 121
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S V + TT + GT
Sbjct: 122 ANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTT-LCGTLD 175
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G P + +E
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 146
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 147 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 203
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNI 430
++ E E+A + +R LGQG G VY+G + G + VAIK ++
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------ 484
+F+NE +++ + N +VV+LLG + + L++ E + G L Y+
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 485 -PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
P + +++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R +
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 544 -IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
D + ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 238
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 19/226 (8%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEV 437
S + + A ++F R LG+G G VY + I+A+K K++L Q EV
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRI 494
I S + H N+++L G + L+ E+ P GT+Y+ + + E+ T+
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
E+++AL Y HS I HRDIK N+LL K++DFG S + + +
Sbjct: 117 ITELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLC 170
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 158
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 159 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 158
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 159 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 129
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 130 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 158
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 159 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 21/239 (8%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRI-------VAIKK-SKLVDESNI 430
++ E E+A + +R LGQG G VY+G + G + VAIK ++
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------ 484
+F+NE +++ + N +VV+LLG + + L++ E + G L Y+
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 485 -PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
P + +++A E++D + YL++ + HRD+ + N ++ + + K+ DFG +R +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 544 -IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
D + ++ PE + FT SDV+SFGVVL E+ T ++P + +E+
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 158
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 159 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 19/231 (8%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQ 432
T L + + D+F+ R LG+G G VY + I+A+K KS+L E Q
Sbjct: 2 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 433 FINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEI 490
E+ I S + H N++++ + + L+ EF P G LY+ + H + +E +
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QR 116
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
E++DAL Y H I HRDIK N+L+ K K++DFG S + L
Sbjct: 117 SATFMEELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWS----VHAPSLR 169
Query: 551 TRVQ-GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
R GT YL PE EK D++ GV+ E L G P S E
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 117
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S + + + GT
Sbjct: 118 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLD 171
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 117/241 (48%), Gaps = 21/241 (8%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM---LTNGRIVAIKKSKLVDES----- 428
+ +F E E++ + R LGQG G VY+G + G K V+ES
Sbjct: 1 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 60
Query: 429 NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
IE F+NE +++ +VV+LLG + + L+V E + +G L Y+ E
Sbjct: 61 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 485 ---PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
P T + +++A E++D + YL++ + HRD+ + N ++ + K+ DFG +R
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRD 176
Query: 542 VM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ D + ++ PE + FT SD++SFGVVL E+ + ++P + +E
Sbjct: 177 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
Query: 600 E 600
+
Sbjct: 237 Q 237
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 19/231 (8%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQ 432
T L + + D+F+ R LG+G G VY + I+A+K KS+L E Q
Sbjct: 1 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 433 FINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEI 490
E+ I S + H N++++ + + L+ EF P G LY+ + H + +E +
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QR 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
E++DAL Y H I HRDIK N+L+ K K++DFG S + L
Sbjct: 116 SATFMEELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWS----VHAPSLR 168
Query: 551 TRVQ-GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
R GT YL PE EK D++ GV+ E L G P S E
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 158
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 159 GMKYLSDMGFV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 117
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S + + + GT
Sbjct: 118 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLD 171
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 156
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 157 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 213
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 117/241 (48%), Gaps = 21/241 (8%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM---LTNGRIVAIKKSKLVDES----- 428
+ +F E E++ + R LGQG G VY+G + G K V+ES
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 429 NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
IE F+NE +++ +VV+LLG + + L+V E + +G L Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 485 ---PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
P T + +++A E++D + YL++ + HRD+ + N ++ + K+ DFG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 542 VM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ D + ++ PE + FT SD++SFGVVL E+ + ++P + +E
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 600 E 600
+
Sbjct: 240 Q 240
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL 456
+GQG GTVY M + G+ VAI++ L + E INE+ ++ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 457 ETEVPLLVYEFIPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ +V E++ G+L + + +E I R E AL +LHS I H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQVI---H 139
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RDIKS NILL K++DFG + +Q+ +T V GT ++ PE + K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 576 VYSFGVVLVELLTGQKP 592
++S G++ +E++ G+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E + NG+L ++ +F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 158
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL ++ HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 159 GMKYLSDMGAV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ A ++F R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ITEL 120
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ---- 554
++AL Y HS I HRDIK N+LL K++DFG S H + +
Sbjct: 121 ANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLC 170
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT YL PE EK D++S GV+ E L G+ P + +E
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 158
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG +R + D T G
Sbjct: 159 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLV-DESNIEQFINEVAILSQIN 444
+D + ILG GG V+ L + R VA+K ++ L D S +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 445 HRNVVKLLGCCLETE-----VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
H +V + E E +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI--DQTHLTTRVQGTF 557
AL + H I HRD+K ANIL+ KV DFG +R++ + T V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 23/242 (9%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM---LTNGRIVAIKKSKLVDES----- 428
+ +F E E++ + R LGQG G VY+G + G K V+ES
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 429 NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
IE F+NE +++ +VV+LLG + + L+V E + +G L Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 485 ---PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
P T + +++A E++D + YL++ + HRD+ + N ++ + K+ DFG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 542 VMIDQTHLTTRVQGTFG--YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ + + +G ++ PE + FT SD++SFGVVL E+ + ++P + +
Sbjct: 180 I-YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
Query: 599 EE 600
E+
Sbjct: 239 EQ 240
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 19/231 (8%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQ 432
T L + + D+F+ R LG+G G VY + I+A+K KS+L E Q
Sbjct: 1 TALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 433 FINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEI 490
E+ I S + H N++++ + + L+ EF P G LY+ + H + +E +
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-----QR 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
E++DAL Y H I HRDIK N+L+ K K++DFG S + L
Sbjct: 116 SATFMEELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWS----VHAPSLR 168
Query: 551 TRVQ-GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
R GT YL PE EK D++ GV+ E L G P S E
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 125
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + + G + + PE
Sbjct: 126 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 21/241 (8%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM---LTNGRIVAIKKSKLVDES----- 428
+ ++ E E++ + R LGQG G VY+G + G K V+ES
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 429 NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
IE F+NE +++ +VV+LLG + + L+V E + +G L Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 485 ---PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
P T + +++A E++D + YL++ + HRD+ + N ++ + K+ DFG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 542 VM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ D + ++ PE + FT SD++SFGVVL E+ + ++P + +E
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 600 E 600
+
Sbjct: 240 Q 240
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 396 RILGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESN-IEQFINEVAILSQINHRNVV 449
R LG+G G V Y N G VA+K K N I E+ IL + H N+V
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 450 KLLGCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
K G C E L+ EF+P+G+L +Y+ + I + +L+ A+++ + YL S
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGS 144
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTT---RVQGTFGYLDPEY 564
+ HRD+ + N+L++ +++ K+ DFG ++++ D+ T R F Y PE
Sbjct: 145 RQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PEC 200
Query: 565 FRSSQFTEKSDVYSFGVVLVELLT 588
S+F SDV+SFGV L ELLT
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 117/241 (48%), Gaps = 21/241 (8%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM---LTNGRIVAIKKSKLVDES----- 428
+ +F E E++ + R LGQG G VY+G + G K V+ES
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 429 NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
IE F+NE +++ +VV+LLG + + L+V E + +G L Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 485 ---PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
P T + +++A E++D + YL++ + HRD+ + N ++ + K+ DFG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 542 VM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ D + ++ PE + FT SD++SFGVVL E+ + ++P + +E
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 600 E 600
+
Sbjct: 240 Q 240
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 127
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + + G + + PE
Sbjct: 128 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 489
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + + G + + PE
Sbjct: 490 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 585
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 131
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + + G + + PE
Sbjct: 132 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 227
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E++ NG+L ++ +F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 158
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG R + D T G
Sbjct: 159 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 147
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + + G + + PE
Sbjct: 148 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 243
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 147
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + + G + + PE
Sbjct: 148 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 243
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 145
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + + G + + PE
Sbjct: 146 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 241
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 490
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + + G + + PE
Sbjct: 491 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 586
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 114/219 (52%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKG-----MLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG + V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 137
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + + G + + PE
Sbjct: 138 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 233
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E + NG+L ++ +F + + + I +
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 129
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 130 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 396 RILGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESN-IEQFINEVAILSQINHRNVV 449
R LG+G G V Y N G VA+K K N I E+ IL + H N+V
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 450 KLLGCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
K G C E L+ EF+P+G+L +Y+ + I + +L+ A+++ + YL S
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGS 132
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTT---RVQGTFGYLDPEY 564
+ HRD+ + N+L++ +++ K+ DFG ++++ D+ T R F Y PE
Sbjct: 133 RQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PEC 188
Query: 565 FRSSQFTEKSDVYSFGVVLVELLT 588
S+F SDV+SFGV L ELLT
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLV-DESNIEQFINEVAILSQIN 444
+D + ILG GG V+ L + R VA+K ++ L D S +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 445 HRNVVKLLGCCLETE-----VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
H +V + E E +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT--TRVQGTF 557
AL + H I HRD+K ANI++ KV DFG +R++ +T V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML---TNGRI-VAIKKSKL-VDESNIEQFINEVAIL 440
E+ N + ++++G G G V G L + I VAIK K+ E F+ E +I+
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N+++L G +++ ++V E + NG+L ++ +F + + + I +
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI--AS 158
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 159 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLV-DESNIEQFINEVAILSQIN 444
+D + ILG GG V+ L + R VA+K ++ L D S +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 445 HRNVVKLLGCCLETE-----VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
H +V + E E +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT--TRVQGTF 557
AL + H I HRD+K ANI++ KV DFG +R++ +T V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILS 441
+ ++F+ R LG+G G VY + I+A+K K++L Q EV I S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEV 498
+ H N+++L G + L+ E+ P GT+Y+ + + E+ T+ E+
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITEL 121
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
++AL Y HS I HRDIK N+LL K++DFG S V + T + GT
Sbjct: 122 ANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDT-LCGTLD 175
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
YL PE EK D++S GV+ E L G P + +E
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL 456
+GQG GTVY M + G+ VAI++ L + E INE+ ++ + + N+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 457 ETEVPLLVYEFIPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ +V E++ G+L + + +E I R E AL +LHS I H
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQVI---H 140
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RDIKS NILL K++DFG + +Q+ + V GT ++ PE + K D
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVD 199
Query: 576 VYSFGVVLVELLTGQKP 592
++S G++ +E++ G+ P
Sbjct: 200 IWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL 456
+GQG GTVY M + G+ VAI++ L + E INE+ ++ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 457 ETEVPLLVYEFIPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ +V E++ G+L + + +E I R E AL +LHS I H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQVI---H 139
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RDIKS NILL K++DFG + +Q+ + V GT ++ PE + K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 576 VYSFGVVLVELLTGQKP 592
++S G++ +E++ G+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL 456
+GQG GTVY M + G+ VAI++ L + E INE+ ++ + + N+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 457 ETEVPLLVYEFIPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ +V E++ G+L + + +E I R E AL +LHS I H
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQVI---H 140
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
R+IKS NILL K++DFG + +Q+ +T V GT ++ PE + K D
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 199
Query: 576 VYSFGVVLVELLTGQKP 592
++S G++ +E++ G+ P
Sbjct: 200 IWSLGIMAIEMIEGEPP 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL 456
+GQG GTVY M + G+ VAI++ L + E INE+ ++ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 457 ETEVPLLVYEFIPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ +V E++ G+L + + +E I R E AL +LHS I H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-----ECLQALEFLHSNQVI---H 139
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RDIKS NILL K++DFG + +Q+ + V GT ++ PE + K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 576 VYSFGVVLVELLTGQKP 592
++S G++ +E++ G+ P
Sbjct: 199 IWSLGIMAIEMIEGEPP 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 15/240 (6%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGML----TNGRIVAIKKSKL-VDESNIEQFINE 436
S E+ + +I+G G G V G L VAIK K E F++E
Sbjct: 41 SFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSE 100
Query: 437 VAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
+I+ Q +H N+++L G + ++V E++ NG+L ++ +F I + +
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG- 159
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
V + YL + HRD+ + N+L+D KVSDFG SR + D T G
Sbjct: 160 -VGAGMRYLSDLGYV---HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 557 FG--YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV--GYFLEA 611
+ PE F+ SDV+SFGVV+ E+L G++P + + + S V GY L A
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA 275
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 113/240 (47%), Gaps = 15/240 (6%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGML----TNGRIVAIKKSKL-VDESNIEQFINE 436
S E+ + +I+G G G V G L VAIK K E F++E
Sbjct: 41 SFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSE 100
Query: 437 VAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
+I+ Q +H N+++L G + ++V E++ NG+L ++ +F I + +
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG- 159
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM--IDQTHLTTRVQ 554
V + YL + HRD+ + N+L+D KVSDFG SR + D + TT +
Sbjct: 160 -VGAGMRYLSDLGYV---HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV--GYFLEA 611
+ PE F+ SDV+SFGVV+ E+L G++P + + + S V GY L A
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA 275
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 62
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ +T ++ +RL +A +++
Sbjct: 63 EKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKY-----LRLPQLVDMAAQIASG 116
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 117 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKW 171
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 15/219 (6%)
Query: 395 NRILGQGGQGTVYKG-----MLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
++ LG G GTV KG + V I K++ D + ++ + E ++ Q+++ +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+++G C E E +LV E G L +Y+ + + + + +VS + YL +
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 131
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRS 567
+ HRD+ + N+LL ++ AK+SDFG S+++ D+ + G + + PE
Sbjct: 132 FV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+F+ KSDV+SFGV++ E + GQKP R E +++
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 227
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 321
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ +T ++ +RL +A +++
Sbjct: 322 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY-----LRLPQLVDMAAQIASG 375
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 376 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 430
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 431 TAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 125/274 (45%), Gaps = 24/274 (8%)
Query: 396 RILGQG--GQGTVYKGMLTN---GRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVV 449
R LG+G G+ ++Y TN G +VA+K K + + E+ IL + H +++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 450 KLLGCCLETEVP--LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
K GCC + LV E++P G+L Y+ + I L A ++ + + YLH+
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHA 152
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEY 564
I HRD+ + N+LLD+ K+ DFG +++V R G F Y PE
Sbjct: 153 QHYI---HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA-PEC 208
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK--SLVGYFLEAMKENRLFEVLD 622
+ +F SDV+SFGV L ELLT S+ S K L+G M RL E+L+
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMK 656
++ V L K C RPT +
Sbjct: 266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFE 299
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 65
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ +T ++ +RL +A +++
Sbjct: 66 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY-----LRLPQLVDMAAQIASG 119
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 120 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 174
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 397 ILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCC 455
+LG+G G K G ++ +K+ DE F+ EV ++ + H NV+K +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ + + E+I GTL I ++P W R+ A +++ + YLHS I H
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYP--WSQRVSFAKDIASGMAYLHSMN---IIH 131
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTH-------------LTTRVQGTFGYLDP 562
RD+ S N L+ + V+DFG +R ++ ++T V G ++ P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 563 EYFRSSQFTEKSDVYSFGVVLVELL 587
E + EK DV+SFG+VL E++
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 396 RILGQG--GQGTVYKGMLTN---GRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVV 449
R LG+G G+ ++Y TN G +VA+K K + + E+ IL + H +++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 450 KLLGCCLET-EVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
K GCC + E L LV E++P G+L Y+ + I L A ++ + + YLHS
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHS 135
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEY 564
I HR++ + N+LLD+ K+ DFG +++V + R G F Y PE
Sbjct: 136 QHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PEC 191
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK--SLVGYFLEAMKENRLFEVLD 622
+ +F SDV+SFGV L ELLT S+ S K L+G M RL E+L+
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMK 656
++ V L K C RPT +
Sbjct: 249 RGERLPRPDKCPCEVYHLMKNCWETEASFRPTFE 282
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLV-DESNIEQFINEVAILSQIN 444
+D + ILG GG V+ L R VA+K ++ L D S +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 445 HRNVVKLLGCCLETE-----VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
H +V + E E +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYATG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT--TRVQGTF 557
AL + H I HRD+K ANI++ KV DFG +R++ +T V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGR---IVAIKKSKL-VDESNIEQFINEVAIL 440
E+ R++G G G V G L G+ VAIK K+ E F+ E +I+
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H NVV L G + ++V EF+ NG L ++ +F + + + I +
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGI--AA 156
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL A + HRD+ + NIL++ KVSDFG SR + D + T G
Sbjct: 157 GMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE + +FT SDV+S+G+V+ E+++ G++P
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 238
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ +T ++ +RL +A +++
Sbjct: 239 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY-----LRLPQLVDMAAQIASG 292
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 293 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 347
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
PE +FT KSDV+SFG++L EL T G+ P
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 238
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ +T ++ +RL +A +++
Sbjct: 239 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY-----LRLPQLVDMAAQIASG 292
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 293 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 347
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
PE +FT KSDV+SFG++L EL T G+ P
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 10/219 (4%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQ 442
+E+ D+F LG G G V+K +G ++A K L + I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
N +V G + E + G+L Q + I +I +++I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
YL I HRD+K +NIL++ + K+ DFG S +ID + GT Y+ P
Sbjct: 118 TYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ-LIDS--MANSFVGTRSYMSP 172
Query: 563 EYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEED 601
E + + ++ +SD++S G+ LVE+ G+ PI D++ED
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 13/219 (5%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEV 437
K + E E+ + LG G G V+ G VA+K K S + F+ E
Sbjct: 3 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEA 61
Query: 438 AILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
++ Q+ H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A
Sbjct: 62 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAA 118
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++++ + ++ I HRD+++ANIL+ D K++DFG +R +I+ T R
Sbjct: 119 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAK 173
Query: 557 F--GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
F + PE FT KSDV+SFG++L E++T G+ P
Sbjct: 174 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 21/228 (9%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN------GRIVAIKKSKLVDESNIEQFINEVAILSQIN 444
N R LG+G G V+ N +VA+K K ++ + F E +L+ +
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ-------TEEFP---ITWEIRLRI 494
H ++VK G C+E + ++V+E++ +G L +++ E P +T L I
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-IDQTHLTTRV 553
A +++ + YL AS HRD+ + N L+ + K+ DFG SR V D +
Sbjct: 134 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHT 190
Query: 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
++ PE +FT +SDV+S GVVL E+ T G++P + E
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 238
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 13/213 (6%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
E E+ + LG G G V+ G VA+K K S + F+ E ++ Q+
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 66
Query: 444 NHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A ++++ +
Sbjct: 67 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGM 123
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYL 560
++ I HRD+++ANIL+ D K++DFG +R +I+ T R F +
Sbjct: 124 AFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWT 178
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
PE FT KSDV+SFG++L E++T G+ P
Sbjct: 179 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEV 437
K + E E+ + LG G G V+ G VA+K K S + F+ E
Sbjct: 9 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEA 67
Query: 438 AILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
++ Q+ H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A
Sbjct: 68 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAA 124
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++++ + ++ I HRD+++ANIL+ D K++DFG +R +I+ T R
Sbjct: 125 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAK 179
Query: 557 F--GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
F + PE FT KSDV+SFG++L E++T
Sbjct: 180 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEV 437
K + E E+ + LG G G V+ G VA+K K S + F+ E
Sbjct: 7 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEA 65
Query: 438 AILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
++ Q+ H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A
Sbjct: 66 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAA 122
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++++ + ++ I HRD+++ANIL+ D K++DFG +R +I+ T R
Sbjct: 123 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAK 177
Query: 557 F--GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
F + PE FT KSDV+SFG++L E++T
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 126/246 (51%), Gaps = 23/246 (9%)
Query: 396 RILGQGGQGTVYKGMLTN----GRIVAIKKSKLVDESN--IEQFINEVAILSQINHRNVV 449
+ILG+G G+V +G L VA+K KL + S IE+F++E A + +H NV+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 450 KLLGCCLETEV-----PLLVYEFIPNGTLYQY-IHDQTEEFP--ITWEIRLRIAIEVSDA 501
+LLG C+E P+++ F+ G L+ Y ++ + E P I + L+ ++++
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV-QGTFGYL 560
+ YL + + HRD+ + N +L D V+DFG S+ + + R+ + ++
Sbjct: 160 MEYLSNRNFL---HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE--DKSLVGYFLEAMKE--N 615
E +T KSDV++FGV + E+ T G P + E D L G+ L+ ++ +
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD 276
Query: 616 RLFEVL 621
L+E++
Sbjct: 277 ELYEIM 282
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEV 437
K + E E+ + LG G G V+ G VA+K K S + F+ E
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEA 59
Query: 438 AILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
++ Q+ H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A
Sbjct: 60 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAA 116
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++++ + ++ I HRD+++ANIL+ D K++DFG +R +I+ T R
Sbjct: 117 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAK 171
Query: 557 F--GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
F + PE FT KSDV+SFG++L E++T
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 13/213 (6%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
E E+ + LG G G V+ G VA+K K S + F+ E ++ Q+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 444 NHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A ++++ +
Sbjct: 66 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGM 122
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYL 560
++ I HRD+++ANIL+ D K++DFG +R +I+ T R F +
Sbjct: 123 AFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWT 177
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
PE FT KSDV+SFG++L E++T G+ P
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 13/213 (6%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
E E+ + LG G G V+ G VA+K K S + F+ E ++ Q+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 65
Query: 444 NHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A ++++ +
Sbjct: 66 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGM 122
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYL 560
++ I HRD+++ANIL+ D K++DFG +R +I+ T R F +
Sbjct: 123 AFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAKFPIKWT 177
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
PE FT KSDV+SFG++L E++T G+ P
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEV 437
K + E E+ + LG G G V+ G VA+K K S + F+ E
Sbjct: 10 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEA 68
Query: 438 AILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
++ Q+ H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A
Sbjct: 69 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAA 125
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++++ + ++ I HRD+++ANIL+ D K++DFG +R +I+ T R
Sbjct: 126 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEXTAREGAK 180
Query: 557 F--GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
F + PE FT KSDV+SFG++L E++T
Sbjct: 181 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 19/214 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 238
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ +T ++ +RL +A +++
Sbjct: 239 EKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKY-----LRLPQLVDMAAQIASG 292
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 293 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 347
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
PE +FT KSDV+SFG++L EL T G+ P
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 398 LGQGGQGTVYKGML--TNGRIVAI-----KKSKLVDESNIEQFINEVAILSQINHRNVVK 450
LG G G V +G +G+ V++ K L ++ FI EV + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
L G L + +V E P G+L + F + R A++V++ + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 136
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSS 568
I HRD+ + N+LL + K+ DFG R++ + H + + F + PE ++
Sbjct: 137 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKP 592
F+ SD + FGV L E+ T GQ+P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 398 LGQGGQGTVYKGML--TNGRIVAI-----KKSKLVDESNIEQFINEVAILSQINHRNVVK 450
LG G G V +G +G+ V++ K L ++ FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
L G L + +V E P G+L + F + R A++V++ + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 132
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSS 568
I HRD+ + N+LL + K+ DFG R++ + H + + F + PE ++
Sbjct: 133 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKP 592
F+ SD + FGV L E+ T GQ+P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 398 LGQGGQGTVYKGML--TNGRIVAI-----KKSKLVDESNIEQFINEVAILSQINHRNVVK 450
LG G G V +G +G+ V++ K L ++ FI EV + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
L G L + +V E P G+L + F + R A++V++ + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 142
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSS 568
I HRD+ + N+LL + K+ DFG R++ + H + + F + PE ++
Sbjct: 143 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKP 592
F+ SD + FGV L E+ T GQ+P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 398 LGQGGQGTVYKGML--TNGRIVAI-----KKSKLVDESNIEQFINEVAILSQINHRNVVK 450
LG G G V +G +G+ V++ K L ++ FI EV + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
L G L + +V E P G+L + F + R A++V++ + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 142
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSS 568
I HRD+ + N+LL + K+ DFG R++ + H + + F + PE ++
Sbjct: 143 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKP 592
F+ SD + FGV L E+ T GQ+P
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 112/206 (54%), Gaps = 14/206 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN--GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
N ++L G+G ML + G VA+K K +++ + F+ E ++++Q+ H N+
Sbjct: 10 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNL 67
Query: 449 VKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V+LLG +E + L +V E++ G+L Y+ + + + L+ +++V +A+ YL
Sbjct: 68 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG 126
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
+ HRD+ + N+L+ + AKVSDFG ++ Q V+ T PE R
Sbjct: 127 NNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALRE 179
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKP 592
+ F+ KSDV+SFG++L E+ + G+ P
Sbjct: 180 AAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 13/213 (6%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
E E+ + LG G G V+ G VA+K K S + F+ E ++ Q+
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 60
Query: 444 NHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A ++++ +
Sbjct: 61 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGM 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYL 560
++ I HRD+++ANIL+ D K++DFG +R +I+ T R F +
Sbjct: 118 AFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWT 172
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
PE FT KSDV+SFG++L E++T G+ P
Sbjct: 173 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 398 LGQGGQGTVYKGML--TNGRIVAI-----KKSKLVDESNIEQFINEVAILSQINHRNVVK 450
LG G G V +G +G+ V++ K L ++ FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
L G L + +V E P G+L + F + R A++V++ + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 132
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSS 568
I HRD+ + N+LL + K+ DFG R++ + H + + F + PE ++
Sbjct: 133 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKP 592
F+ SD + FGV L E+ T GQ+P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEV 437
K + E E+ + LG G G V+ G VA+K K S + F+ E
Sbjct: 11 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEA 69
Query: 438 AILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
++ Q+ H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A
Sbjct: 70 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAA 126
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++++ + ++ I HRD+++ANIL+ D K++DFG +R +I+ T R
Sbjct: 127 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAK 181
Query: 557 F--GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
F + PE FT KSDV+SFG++L E++T
Sbjct: 182 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 112/206 (54%), Gaps = 14/206 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN--GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
N ++L G+G ML + G VA+K K +++ + F+ E ++++Q+ H N+
Sbjct: 19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNL 76
Query: 449 VKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V+LLG +E + L +V E++ G+L Y+ + + + L+ +++V +A+ YL
Sbjct: 77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG 135
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
+ HRD+ + N+L+ + AKVSDFG ++ Q V+ T PE R
Sbjct: 136 NNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALRE 188
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKP 592
+F+ KSDV+SFG++L E+ + G+ P
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457
LG G G V+ G VA+K K S + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-- 77
Query: 458 TEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHR 516
T+ P+ ++ E++ NG+L ++ + +T L +A ++++ + ++ I HR
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYI---HR 133
Query: 517 DIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRSSQFTEKS 574
D+++ANIL+ D K++DFG +R +I+ T R F + PE FT KS
Sbjct: 134 DLRAANILVSDTLSCKIADFGLAR--LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 575 DVYSFGVVLVELLT 588
DV+SFG++L E++T
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ +I H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKIRH 72
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ + ++ +RL +A +++
Sbjct: 73 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 126
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 127 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 181
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEV 437
K + E E+ + LG G G V+ G VA+K K S + F+ E
Sbjct: 7 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEA 65
Query: 438 AILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
++ Q+ H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A
Sbjct: 66 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAA 122
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++++ + ++ I HRD+++ANIL+ D K++DFG +R +I+ T R
Sbjct: 123 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAK 177
Query: 557 F--GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
F + PE FT KSDV+SFG++L E++T
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLV-DESNIEQFINEVAILSQIN 444
+D + ILG GG V+ L R VA+K ++ L D S +F E + +N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 445 HRNVVKLLGCCLETE-----VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
H +V + E E +P +V E++ TL +H E P+T + + + +
Sbjct: 71 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 126
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT--TRVQGTF 557
AL + H I HRD+K ANI++ KV DFG +R++ +T V GT
Sbjct: 127 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 11/218 (5%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ + LG G G V+ G VAIK K S E F+ E I+ ++ H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKH 63
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
+V+L E + +V E++ G+L ++ D E + + +A +V+ + Y+
Sbjct: 64 DKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPE 563
I HRD++SANIL+ + K++DFG +R +I+ T R F + PE
Sbjct: 122 ERMNYI---HRDLRSANILVGNGLICKIADFGLAR--LIEDNEXTARQGAKFPIKWTAPE 176
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
+FT KSDV+SFG++L EL+T G+ P ++ E
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 398 LGQGGQGTVYKGML--TNGRIVAI-----KKSKLVDESNIEQFINEVAILSQINHRNVVK 450
LG G G V +G +G+ V++ K L ++ FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
L G L + +V E P G+L + F + R A++V++ + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 132
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSS 568
I HRD+ + N+LL + K+ DFG R++ + H + + F + PE ++
Sbjct: 133 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKP 592
F+ SD + FGV L E+ T GQ+P
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEV 437
K + E E+ + LG G G V+ G VA+K K S + F+ E
Sbjct: 6 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEA 64
Query: 438 AILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
++ Q+ H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A
Sbjct: 65 NLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAA 121
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++++ + ++ I HRD+++ANIL+ D K++DFG +R +I+ T R
Sbjct: 122 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAK 176
Query: 557 F--GYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
F + PE FT KSDV+SFG++L E++T
Sbjct: 177 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 16/205 (7%)
Query: 398 LGQGGQGTVYKGML--TNGRIVAI-----KKSKLVDESNIEQFINEVAILSQINHRNVVK 450
LG G G V +G +G+ V++ K L ++ FI EV + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
L G L + +V E P G+L + F + R A++V++ + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLESKRF 136
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSS 568
I HRD+ + N+LL + K+ DFG R++ + H + + F + PE ++
Sbjct: 137 I---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKP 592
F+ SD + FGV L E+ T GQ+P
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 18/215 (8%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLV-DESNIEQFINEVAILSQIN 444
+D + ILG GG V+ L R VA+K ++ L D S +F E + +N
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 445 HRNVVKLLGCCLETE-----VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
H +V + E E +P +V E++ TL +H E P+T + + + +
Sbjct: 88 HPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADAC 143
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT--TRVQGTF 557
AL + H I HRD+K ANI++ KV DFG +R++ +T V GT
Sbjct: 144 QALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
YL PE R +SDVYS G VL E+LTG+ P
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 112/206 (54%), Gaps = 14/206 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN--GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
N ++L G+G ML + G VA+K K +++ + F+ E ++++Q+ H N+
Sbjct: 4 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNL 61
Query: 449 VKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V+LLG +E + L +V E++ G+L Y+ + + + L+ +++V +A+ YL
Sbjct: 62 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG 120
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
+ HRD+ + N+L+ + AKVSDFG ++ Q V+ T PE R
Sbjct: 121 NNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALRE 173
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKP 592
+F+ KSDV+SFG++L E+ + G+ P
Sbjct: 174 KKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 396 RILGQG--GQGTVYKGMLTN---GRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVV 449
R LG+G G+ ++Y TN G +VA+K K + + E+ IL + H +++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 450 KLLGCCLET-EVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
K GCC + E L LV E++P G+L Y+ + I L A ++ + + YLH+
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHA 135
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEY 564
I HR++ + N+LLD+ K+ DFG +++V + R G F Y PE
Sbjct: 136 QHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PEC 191
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK--SLVGYFLEAMKENRLFEVLD 622
+ +F SDV+SFGV L ELLT S+ S K L+G M RL E+L+
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTH---CDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMK 656
++ V L K C RPT +
Sbjct: 249 RGERLPRPDKCPCEVYHLMKNCWETEASFRPTFE 282
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 116/226 (51%), Gaps = 23/226 (10%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGR-------IVAIKKSKLVDESNIEQFINEVAILSQI 443
F ++LGQG G V+ +G + +KK+ L + + E IL ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEV 83
Query: 444 NHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVS 499
NH +VKL +TE L L+ +F+ G L+ + + TEE +++ +A E++
Sbjct: 84 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKFYLA-ELA 136
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
AL +LHS + I +RD+K NILLD++ K++DFG S+ ID GT Y
Sbjct: 137 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKES-IDHEKKAYSFCGTVEY 192
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ PE T+ +D +SFGV++ E+LTG P + D +E +++
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 116/226 (51%), Gaps = 23/226 (10%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGR-------IVAIKKSKLVDESNIEQFINEVAILSQI 443
F ++LGQG G V+ +G + +KK+ L + + E IL ++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEV 84
Query: 444 NHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVS 499
NH +VKL +TE L L+ +F+ G L+ + + TEE +++ +A E++
Sbjct: 85 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKFYLA-ELA 137
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
AL +LHS + I +RD+K NILLD++ K++DFG S+ ID GT Y
Sbjct: 138 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKES-IDHEKKAYSFCGTVEY 193
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ PE T+ +D +SFGV++ E+LTG P + D +E +++
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 10/223 (4%)
Query: 386 EMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQI 443
E+ D+F LG G G V K +G I+A K L + I Q I E+ +L +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
N +V G + E + G+L Q + + I EI +++I V L
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLA 128
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+K +NIL++ + K+ DFG S +ID + GT Y+ PE
Sbjct: 129 YLREKHQI--MHRDVKPSNILVNSRGEIKLCDFGVS-GQLIDS--MANSFVGTRSYMAPE 183
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG 606
+ + ++ +SD++S G+ LVEL G+ PI D++E +++ G
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFG 226
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 69
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ +T ++ +RL ++ +++
Sbjct: 70 EKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKY-----LRLPQLVDMSAQIASG 123
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 124 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEWTARQGAKFPIKW 178
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 116/226 (51%), Gaps = 23/226 (10%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGR-------IVAIKKSKLVDESNIEQFINEVAILSQI 443
F ++LGQG G V+ +G + +KK+ L + + E IL ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEV 83
Query: 444 NHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVS 499
NH +VKL +TE L L+ +F+ G L+ + + TEE +++ +A E++
Sbjct: 84 NHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKFYLA-ELA 136
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
AL +LHS + I +RD+K NILLD++ K++DFG S+ ID GT Y
Sbjct: 137 LALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKES-IDHEKKAYSFCGTVEY 192
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ PE T+ +D +SFGV++ E+LTG P + D +E +++
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 34/241 (14%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGML--TNGR----IVAIKKSKL-VDESNI 430
K+ + E N + LG+G G V K GR VA+K K S +
Sbjct: 11 KILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL 70
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH------------ 478
++E +L Q+NH +V+KL G C + LL+ E+ G+L ++
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 479 ---------DQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY 529
D +E +T + A ++S + YL A + + HRD+ + NIL+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGR 187
Query: 530 RAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRSSQFTEKSDVYSFGVVLVELL 587
+ K+SDFG SR V + +++ R QG ++ E +T +SDV+SFGV+L E++
Sbjct: 188 KMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 588 T 588
T
Sbjct: 247 T 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 23/242 (9%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D N + LG+G G V + R VA+K K S
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEFP----- 485
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 486 ----ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
+T E + + +V+ + +L S I HRD+ + NILL +K K+ DFG +R
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKIXDFGLARD 193
Query: 542 VMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ D ++ + ++ PE +T +SDV+SFGV+L E+ + G P +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 600 ED 601
E+
Sbjct: 254 EE 255
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 112/206 (54%), Gaps = 14/206 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN--GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
N ++L G+G ML + G VA+K K +++ + F+ E ++++Q+ H N+
Sbjct: 191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNL 248
Query: 449 VKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V+LLG +E + L +V E++ G+L Y+ + + + L+ +++V +A+ YL
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG 307
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
+ HRD+ + N+L+ + AKVSDFG ++ Q V+ T PE R
Sbjct: 308 NNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALRE 360
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKP 592
+F+ KSDV+SFG++L E+ + G+ P
Sbjct: 361 KKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 113/232 (48%), Gaps = 21/232 (9%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGM---LTNGRIVAIKKSKLVDES-----NIEQFINEV 437
E++ + R LGQG G VY+G + G K V+ES IE F+NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEA 70
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF-------PITWEI 490
+++ +VV+LLG + + L+V E + +G L Y+ E P T +
Sbjct: 71 SVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 130
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-IDQTHL 549
+++A E++D + YL++ + HRD+ + N ++ + K+ DFG +R + D
Sbjct: 131 MIQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK 187
Query: 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
+ ++ PE + FT SD++SFGVVL E+ + ++P + +E+
Sbjct: 188 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 239
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 72
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ + ++ +RL +A +++
Sbjct: 73 EKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 126
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 127 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEXTARQGAKFPIKW 181
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 390 DNFNTNRILGQGGQGTV-YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
DNF +G+G G V + ++G++VA+KK L + E NEV I+ H NV
Sbjct: 23 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V++ L + +V EF+ G L + H + E I + + V AL LH+
Sbjct: 80 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA 134
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
I HRDIKS +ILL R K+SDFG V + V GT ++ PE
Sbjct: 135 QGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISR 190
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKP 592
+ + D++S G++++E++ G+ P
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 390 DNFNTNRILGQGGQGTV-YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
DNF +G+G G V + ++G++VA+KK L + E NEV I+ H NV
Sbjct: 34 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V++ L + +V EF+ G L + H + E I + + V AL LH+
Sbjct: 91 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA 145
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
I HRDIKS +ILL R K+SDFG V + V GT ++ PE
Sbjct: 146 QGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISR 201
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKP 592
+ + D++S G++++E++ G+ P
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 21/241 (8%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM---LTNGRIVAIKKSKLVDES----- 428
+ ++ E E++ + R LGQG G VY+G + G K V+ES
Sbjct: 5 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 64
Query: 429 NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
IE F+NE +++ +VV+LLG + + L+V E + +G L Y+ E
Sbjct: 65 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 485 ---PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
P T + +++A E++D + YL++ + HR++ + N ++ + K+ DFG +R
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRD 180
Query: 542 VM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ D + ++ PE + FT SD++SFGVVL E+ + ++P + +E
Sbjct: 181 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
Query: 600 E 600
+
Sbjct: 241 Q 241
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 390 DNFNTNRILGQGGQGTV-YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
DNF +G+G G V + ++G++VA+KK L + E NEV I+ H NV
Sbjct: 27 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V++ L + +V EF+ G L + H + E I + + V AL LH+
Sbjct: 84 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA 138
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
I HRDIKS +ILL R K+SDFG V + V GT ++ PE
Sbjct: 139 QGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISR 194
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKP 592
+ + D++S G++++E++ G+ P
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 21/241 (8%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM---LTNGRIVAIKKSKLVDES----- 428
+ ++ E E++ + R LGQG G VY+G + G K V+ES
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 429 NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
IE F+NE +++ +VV+LLG + + L+V E + +G L Y+ E
Sbjct: 64 RIE-FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 485 ---PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
P T + +++A E++D + YL++ + HR++ + N ++ + K+ DFG +R
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 542 VM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ D + ++ PE + FT SD++SFGVVL E+ + ++P + +E
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 600 E 600
+
Sbjct: 240 Q 240
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 390 DNFNTNRILGQGGQGTV-YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
DNF +G+G G V + ++G++VA+KK L + E NEV I+ H NV
Sbjct: 77 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V++ L + +V EF+ G L + H + E I + + V AL LH+
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA 188
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
I HRDIKS +ILL R K+SDFG V + V GT ++ PE
Sbjct: 189 QGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISR 244
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKP 592
+ + D++S G++++E++ G+ P
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 61
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ + ++ +RL +A +++
Sbjct: 62 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 115
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 116 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 170
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 72
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ + ++ +RL +A +++
Sbjct: 73 EKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 126
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 127 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 181
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 390 DNFNTNRILGQGGQGTV-YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
DNF +G+G G V + ++G++VA+KK L + E NEV I+ H NV
Sbjct: 32 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V++ L + +V EF+ G L + H + E I + + V AL LH+
Sbjct: 89 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA 143
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
I HRDIKS +ILL R K+SDFG V + V GT ++ PE
Sbjct: 144 QGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISR 199
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKP 592
+ + D++S G++++E++ G+ P
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQ 442
+E+ + + LG G G V G VA+K ++ E ++ ++F E + +
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVK---MIKEGSMSEDEFFQEAQTMMK 59
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
++H +VK G C + +V E+I NG L Y+ + + L + +V + +
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPS--QLLEMCYDVCEGM 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
+L S I HRD+ + N L+D KVSDFG +R V+ DQ + + + P
Sbjct: 118 AFLESHQFI---HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAP 174
Query: 563 EYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR-STDSEEDKSLVGYFLEAMKENRLFEV 620
E F +++ KSDV++FG+++ E+ + G+ P T+SE L+ + +RL+
Sbjct: 175 EVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-------VVLKVSQGHRLYRP 227
Query: 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
A T+ + C + + +KRPT ++
Sbjct: 228 HLAS----------DTIYQIMYSCWHELPEKRPTFQQ 254
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 69
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ +T ++ +RL ++ +++
Sbjct: 70 EKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKY-----LRLPQLVDMSAQIASG 123
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 124 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 178
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q +F + + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKFSLDLASLILYA 117
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + + ++ +
Sbjct: 118 YQLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQ 442
+E+ D+F LG G G V+K +G ++A K L + I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
N +V G + E + G+L Q + I +I +++I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
YL I HRD+K +NIL++ + K+ DFG S +ID + GT Y+ P
Sbjct: 118 TYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ-LIDS--MANSFVGTRSYMSP 172
Query: 563 EYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG 606
E + + ++ +SD++S G+ LVE+ G+ PI D++E + + G
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 72
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ + ++ +RL +A +++
Sbjct: 73 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 126
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 127 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 181
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 34/241 (14%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGML--TNGR----IVAIKKSKL-VDESNI 430
K+ + E N + LG+G G V K GR VA+K K S +
Sbjct: 11 KILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL 70
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH------------ 478
++E +L Q+NH +V+KL G C + LL+ E+ G+L ++
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 479 ---------DQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY 529
D +E +T + A ++S + YL A + + HRD+ + NIL+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGR 187
Query: 530 RAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRSSQFTEKSDVYSFGVVLVELL 587
+ K+SDFG SR V ++ R QG ++ E +T +SDV+SFGV+L E++
Sbjct: 188 KMKISDFGLSRDV-YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 588 T 588
T
Sbjct: 247 T 247
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 390 DNFNTNRILGQGGQGTV-YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
DNF +G+G G V + ++G++VA+KK L + E NEV I+ H NV
Sbjct: 154 DNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 210
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
V++ L + +V EF+ G L + H + E I + + V AL LH+
Sbjct: 211 VEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHA 265
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
I HRDIKS +ILL R K+SDFG V + V GT ++ PE
Sbjct: 266 QGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISR 321
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKP 592
+ + D++S G++++E++ G+ P
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQ 442
+E+ D+F LG G G V+K +G ++A K L + I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
N +V G + E + G+L Q + I +I +++I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
YL I HRD+K +NIL++ + K+ DFG S +ID + GT Y+ P
Sbjct: 118 TYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ-LIDS--MANSFVGTRSYMSP 172
Query: 563 EYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG 606
E + + ++ +SD++S G+ LVE+ G+ PI D++E + + G
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQ 442
+E+ D+F LG G G V+K +G ++A K L + I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
N +V G + E + G+L Q + I +I +++I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
YL I HRD+K +NIL++ + K+ DFG S +ID + GT Y+ P
Sbjct: 118 TYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ-LIDS--MANSFVGTRSYMSP 172
Query: 563 EYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG 606
E + + ++ +SD++S G+ LVE+ G+ PI D++E + + G
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQ 442
+E+ D+F LG G G V+K +G ++A K L + I Q I E+ +L +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
N +V G + E + G+L Q + I +I +++I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
YL I HRD+K +NIL++ + K+ DFG S +ID + GT Y+ P
Sbjct: 118 TYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ-LIDS--MANSFVGTRSYMSP 172
Query: 563 EYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG 606
E + + ++ +SD++S G+ LVE+ G+ PI D++E + + G
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 216
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 34/241 (14%)
Query: 378 KLFTSMELEMATDNFNTNRILGQGGQGTVYKGML--TNGR----IVAIKKSKL-VDESNI 430
K+ + E N + LG+G G V K GR VA+K K S +
Sbjct: 11 KILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSEL 70
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH------------ 478
++E +L Q+NH +V+KL G C + LL+ E+ G+L ++
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 479 ---------DQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY 529
D +E +T + A ++S + YL A + + HRD+ + NIL+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGR 187
Query: 530 RAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPEYFRSSQFTEKSDVYSFGVVLVELL 587
+ K+SDFG SR V ++ R QG ++ E +T +SDV+SFGV+L E++
Sbjct: 188 KMKISDFGLSRDV-YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 588 T 588
T
Sbjct: 247 T 247
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 19/214 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K + S E F+ E ++ ++ H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLRH 239
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ + ++ +RL +A +++
Sbjct: 240 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 293
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG R +I+ T R F +
Sbjct: 294 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLGR--LIEDNEYTARQGAKFPIKW 348
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
PE +FT KSDV+SFG++L EL T G+ P
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 63
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ + ++ +RL +A +++
Sbjct: 64 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 117
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 118 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 172
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q +F + + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKFSLDLASLILYA 117
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + ++ +
Sbjct: 118 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 12/224 (5%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR----IVAIKKSKLVDESNIEQFINEV 437
S+++++ ++F +++LG+G G V+ I A+KK ++ + ++E + E
Sbjct: 10 SLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 438 AILSQINHRNVVKLLGCCLETEVPLL-VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
+LS + + C +T+ L V E++ G L +I +F ++ A
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATF--YAA 126
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
E+ L +LHS I +RD+K NILLD K++DFG + M+ T GT
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGT 182
Query: 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
Y+ PE ++ D +SFGV+L E+L GQ P D EE
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 226
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 138/298 (46%), Gaps = 43/298 (14%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFI--NE 436
F SME + ++G+G G V K + GRIVAIKK D+ + + I E
Sbjct: 21 FQSME------KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMRE 74
Query: 437 VAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFP--ITWEIRLRI 494
+ +L Q+ H N+V LL C + + LV+EF+ + L D E FP + +++ +
Sbjct: 75 IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTIL-----DDLELFPNGLDYQVVQKY 129
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554
++ + + + HS I HRDIK NIL+ K+ DFG +R++ V
Sbjct: 130 LFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV- 185
Query: 555 GTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK---------SL 604
T Y PE ++ + DV++ G ++ E+ G+ P+ DS+ D+ +L
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE-PLFPGDSDIDQLYHIMMCLGNL 244
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEII---------TVAMLAKRCLNMIGKKRP 653
+ E +N +F + L E KE E + V LAK+CL++ KRP
Sbjct: 245 IPRHQELFNKNPVFAGVR---LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 72
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ + ++ +RL +A +++
Sbjct: 73 EKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 126
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 127 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 181
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 23/242 (9%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D N + LG+G G V + R VA+K K S
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEFP----- 485
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 486 ----ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
+T E + + +V+ + +L S I HRD+ + NILL +K K+ DFG +R
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARD 193
Query: 542 VMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ D ++ + ++ PE +T +SDV+SFGV+L E+ + G P +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 600 ED 601
E+
Sbjct: 254 EE 255
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 109/213 (51%), Gaps = 13/213 (6%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
E E+ + LG G G V+ G VA+K K S + F+ E ++ Q+
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQL 61
Query: 444 NHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
H+ +V+L T+ P+ ++ E++ NG+L ++ + +T L +A ++++ +
Sbjct: 62 QHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGM 118
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYL 560
++ I HR++++ANIL+ D K++DFG +R +I+ T R F +
Sbjct: 119 AFIEERNYI---HRNLRAANILVSDTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWT 173
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
PE FT KSDV+SFG++L E++T G+ P
Sbjct: 174 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTNGR-IVAIK---KSKLVDESNIEQFINEVAILSQINH 445
D+F R LG+G G VY IVA+K KS++ E Q E+ I + ++H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVSDAL 502
N+++L + L+ E+ P G LY+ + E+ T I E++DAL
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT------IMEELADAL 136
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ-GTFGYLD 561
Y H I HRDIK N+LL K K++DFG S + L + GT YL
Sbjct: 137 MYCHGKKVI---HRDIKPENLLLGLKGELKIADFGWS----VHAPSLRRKTMCGTLDYLP 189
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE EK D++ GV+ ELL G P S E
Sbjct: 190 PEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 72
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G L ++ + ++ +RL +A +++
Sbjct: 73 EKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 126
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 127 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 181
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q ++ + + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 117
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + + ++ +
Sbjct: 118 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q +F + + A
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKFSLDLASLILYA 497
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + + ++ +
Sbjct: 498 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 72
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G L ++ + ++ +RL +A +++
Sbjct: 73 EKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 126
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+++ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 127 MAYVERMNYV---HRDLRAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 181
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 10/228 (4%)
Query: 386 EMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQI 443
E+ D+F LG G G V+K +G ++A K L + I Q I E+ +L +
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
N +V G + E + G+L Q + I +I +++I V L
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLT 180
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+K +NIL++ + K+ DFG S +ID + GT Y+ PE
Sbjct: 181 YLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ-LIDS--MANSFVGTRSYMSPE 235
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611
+ + ++ +SD++S G+ LVE+ G+ PI D++E + + G +E
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 283
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q ++ + + A
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 122
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + + ++ +
Sbjct: 123 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ LGQG G V+ G VAIK K S E F+ E ++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRH 72
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR----IAIEVSDA 501
+V+L E + +V E++ G+L ++ + ++ +RL +A +++
Sbjct: 73 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY-----LRLPQLVDMAAQIASG 126
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GY 559
+ Y+ + HRD+ +ANIL+ + KV+DFG +R +I+ T R F +
Sbjct: 127 MAYVERMNYV---HRDLAAANILVGENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKW 181
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE +FT KSDV+SFG++L EL T
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q ++ + + A
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 119
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + + ++ +
Sbjct: 120 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 176
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 177 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q ++ + + A
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 117
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + + ++ +
Sbjct: 118 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q ++ + + A
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 145
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + + ++ +
Sbjct: 146 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 202
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 203 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q ++ + + A
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYA 120
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + + ++ +
Sbjct: 121 YQLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 127/273 (46%), Gaps = 37/273 (13%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL 456
+G+G G V + G+ VA+KK L + E NEV I+ +H NVV + L
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 457 ETEVPLLVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ +V EF+ G L + H + E I + + V AL YLH+ I H
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQGVI---H 164
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RDIKS +ILL R K+SDFG V + V GT ++ PE + + D
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVD 223
Query: 576 VYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF----LEAMKENRLFEVLDARVLKEAKE 631
++S G++++E++ G+ P YF L+AM+ R+ + L RV
Sbjct: 224 IWSLGIMVIEMIDGEPP--------------YFNEPPLQAMR--RIRDSLPPRV------ 261
Query: 632 EEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664
+++ V+ + + L+++ + P+ + A EL G
Sbjct: 262 KDLHKVSSVLRGFLDLMLVREPSQRATAQELLG 294
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 12/224 (5%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR----IVAIKKSKLVDESNIEQFINEV 437
S+++++ ++F +++LG+G G V+ I A+KK ++ + ++E + E
Sbjct: 9 SLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 68
Query: 438 AILSQINHRNVVKLLGCCLETEVPLL-VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
+LS + + C +T+ L V E++ G L +I +F ++ A
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATF--YAA 125
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
E+ L +LHS I +RD+K NILLD K++DFG + M+ T GT
Sbjct: 126 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGT 181
Query: 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
Y+ PE ++ D +SFGV+L E+L GQ P D EE
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFIN 435
++ + E+ + R +G+G G V++G+ + VAIK K +S E+F+
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E + Q +H ++VKL+G E V ++ E G L ++ Q +F + + A
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKFSLDLASLILYA 497
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
++S AL YL S + HRDI + N+L+ K+ DFG SR + + ++ +
Sbjct: 498 YQLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
++ PE +FT SDV+ FGV + E+L G KP +
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 10/223 (4%)
Query: 386 EMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQI 443
E+ D+F LG G G V+K +G ++A K L + I Q I E+ +L +
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
N +V G + E + G+L Q + I +I +++I V L
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLT 145
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+K +NIL++ + K+ DFG S +ID + GT Y+ PE
Sbjct: 146 YLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ-LIDS--MANSFVGTRSYMSPE 200
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG 606
+ + ++ +SD++S G+ LVE+ G+ PI D++E + + G
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 243
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 391 NFNTNRILGQGGQGTVY---------KGMLTNGRIVAIKKSKLVDESNIEQFINEVAILS 441
+F ++LGQG G V+ G L +++ K+ D + E IL+
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM---ERDILA 85
Query: 442 QINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIE 497
+NH VVKL +TE L L+ +F+ G L+ + + TEE +++ +A E
Sbjct: 86 DVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE-----DVKFYLA-E 138
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF 557
++ L +LHS + I +RD+K NILLD++ K++DFG S+ ID GT
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEA-IDHEKKAYSFCGTV 194
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
Y+ PE + +D +S+GV++ E+LTG P + D +E +L+
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 20/272 (7%)
Query: 396 RILGQG--GQGTVYKGMLTN---GRIVAIKKSKLVDESNIEQ-FINEVAILSQINHRNVV 449
R LG+G G+ ++Y TN G +VA+K K + + E+ IL + H ++V
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 450 KLLGCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
K GCC + + LV E++P G+L Y+ + L A ++ + + YLH+
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHA 130
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEY 564
I HR + + N+LLD+ K+ DFG +++V + R G F Y PE
Sbjct: 131 QHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PEC 186
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624
+ +F SDV+SFGV L ELLT +S ++ + L+G+ M RL E+L+
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTE-LIGHTQGQMTVLRLTELLERG 245
Query: 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMK 656
+ + L K C RPT +
Sbjct: 246 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQ 277
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 20/272 (7%)
Query: 396 RILGQG--GQGTVYKGMLTN---GRIVAIKKSKLVDESNIEQ-FINEVAILSQINHRNVV 449
R LG+G G+ ++Y TN G +VA+K K + + E+ IL + H ++V
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 450 KLLGCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
K GCC + + LV E++P G+L Y+ + L A ++ + + YLH+
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHA 129
Query: 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLDPEY 564
I HR + + N+LLD+ K+ DFG +++V + R G F Y PE
Sbjct: 130 QHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PEC 185
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624
+ +F SDV+SFGV L ELLT +S ++ + L+G+ M RL E+L+
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTE-LIGHTQGQMTVLRLTELLERG 244
Query: 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMK 656
+ + L K C RPT +
Sbjct: 245 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQ 276
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 12/215 (5%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSK-LVDESNIEQFINEVAIL 440
E+ + R +G+G G V++G+ + VAIK K +S E+F+ E +
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H ++VKL+G E V ++ E G L ++ Q ++ + + A ++S
Sbjct: 63 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLST 119
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
AL YL S + HRDI + N+L+ K+ DFG SR + + ++ + ++
Sbjct: 120 ALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 176
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIR 594
PE +FT SDV+ FGV + E+L G KP +
Sbjct: 177 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 11/224 (4%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKL-VDESNIEQFINEVAILSQINH 445
++ F LG G TVYKG+ T G VA+K+ KL +E I E++++ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT-EEFPITWEIRL--RIAIEVSDAL 502
N+V+L LV+EF+ N L +Y+ +T P E+ L ++ L
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
+ H I HRD+K N+L++ + + K+ DFG +R+ I ++ V T Y P
Sbjct: 122 AFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAP 177
Query: 563 EYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ S+ ++ D++S G +L E++TG+ T+ EE L+
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGR---IVAIKKSKL-VDESNIEQFINEVAIL 440
E+ R++G G G V G L G+ VAIK K+ E F+ E +I+
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
Q +H N++ L G +++ ++V E++ NG+L ++ +F + + + I S
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGI--SA 135
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-- 558
+ YL + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 136 GMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 126/290 (43%), Gaps = 41/290 (14%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
+ DNF R+LG+G G V + G + A+K K ++ + ++E + E ILS
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 443 INHRNVVKLLGCCLETEVPLL-VYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSD 500
+ + L CC +T L V EF+ G L +I ++ F E R R A E+
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-KSRRFD---EARARFYAAEIIS 135
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
AL +LH I +RD+K N+LLD + K++DFG + + + T GT Y+
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-TTATFCGTPDYI 191
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620
PE + + D ++ GV+L E+L G P EA E+ LFE
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAP----------------FEAENEDDLFEA 235
Query: 621 LDARVLKEAKEEEIITVAML---AKRCLNMIGKKRPTMKEAAFELGGIRA 667
+ +E++ L A L K PTM+ + GG A
Sbjct: 236 I--------LNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHA 277
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFIN-EV 437
F SM+ E + F +G+G G V+KG+ ++VAIK L + + + I E+
Sbjct: 20 FQSMDPE---ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI 76
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIE 497
+LSQ + V K G L+ ++ E++ G+ D E P+ I E
Sbjct: 77 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL----DLLEPGPLDETQIATILRE 132
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF 557
+ L YLHS I HRDIK+AN+LL + K++DFG + + Q T V GT
Sbjct: 133 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTP 188
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
++ PE + S + K+D++S G+ +EL G+ P
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 20/227 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGMLT--NGRIVAIK----KSKLVDESNIEQFINEVAILSQIN 444
F R+LG+G G+V + L +G V + K+ ++ S+IE+F+ E A + + +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 445 HRNVVKLLGCCLETE------VPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIA 495
H +V KL+G L + +P+++ F+ +G L+ ++ F + + +R
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQ 554
++++ + YL S I HRD+ + N +L + V+DFG SR + D +
Sbjct: 144 VDIACGMEYLSSRNFI---HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASK 200
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
+L E + +T SDV++FGV + E++T GQ P ++ E
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKL---- 451
LG GG G V + + + G VAIK+ + + N E++ E+ I+ ++NH NVV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 452 --LGCCLETEVPLLVYEFIPNGTLYQYIHD-----QTEEFPITWEIRLRIAIEVSDALCY 504
L ++PLL E+ G L +Y++ +E PI + ++S AL Y
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRY 137
Query: 505 LHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
LH I HRD+K NI+L + K+ D G ++ +DQ L T GT YL
Sbjct: 138 LHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE--LDQGELCTEFVGTLQYLA 192
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
PE ++T D +SFG + E +TG +P
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKL---- 451
LG GG G V + + + G VAIK+ + + N E++ E+ I+ ++NH NVV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 452 --LGCCLETEVPLLVYEFIPNGTLYQYIHD-----QTEEFPITWEIRLRIAIEVSDALCY 504
L ++PLL E+ G L +Y++ +E PI + ++S AL Y
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSALRY 136
Query: 505 LHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
LH I HRD+K NI+L + K+ D G ++ +DQ L T GT YL
Sbjct: 137 LHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE--LDQGELCTEFVGTLQYLA 191
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
PE ++T D +SFG + E +TG +P
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 14/212 (6%)
Query: 391 NFNTNRILGQGGQGTVYK-GMLTNGRIVA---IKKSKLVDESNIEQFINEVAILSQINHR 446
+F R LG G G V+ NGR A +KK +V +E +E +LS + H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
++++ G + + ++ ++I G L+ + +++ FP + A EV AL YLH
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNP--VAKFYAAEVCLALEYLH 123
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S I +RD+K NILLD K++DFG ++ V +T + GT Y+ PE
Sbjct: 124 SKDII---YRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEVVS 176
Query: 567 SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDS 598
+ + + D +SFG+++ E+L G P +++
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT 208
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 9/202 (4%)
Query: 392 FNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVK 450
F+ LG+G G+VYK + G+IVAIK+ + ES++++ I E++I+ Q + +VVK
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSPHVVK 88
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G + +V E+ G++ I + + +T + I L YLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQSTLKGLEYLHFMRK 146
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQF 570
I HRDIK+ NILL+ + AK++DFG + + D V GT ++ PE + +
Sbjct: 147 I---HRDIKAGNILLNTEGHAKLADFGVA-GQLTDXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 571 TEKSDVYSFGVVLVELLTGQKP 592
+D++S G+ +E+ G+ P
Sbjct: 203 NCVADIWSLGITAIEMAEGKPP 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 27/214 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
+F ++G GG G V+K +G+ IK+ K N E+ EV L++++H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY----NNEKAEREVKALAKLDHVNIV 67
Query: 450 KLLGCC----------------LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR 493
GC +T+ + EF GTL Q+I + E + + L
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALE 126
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553
+ +++ + Y+HS I +RD+K +NI L D + K+ DFG S+ D R
Sbjct: 127 LFEQITKGVDYIHSKKLI---NRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XRS 181
Query: 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELL 587
+GT Y+ PE S + ++ D+Y+ G++L ELL
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 45/236 (19%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
L A+D F +LGQG G V K + R AIKK + +E + ++EV +L+ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASL 59
Query: 444 NHRNVVKLLGCCLE--------TEVP-----LLVYEFIPNGTLYQYIH-----DQTEEFP 485
NH+ VV+ LE T V + E+ NGTLY IH Q +E+
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY- 118
Query: 486 ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV--- 542
W R+ ++ +AL Y+HS I HRD+K NI +D+ K+ DFG +++V
Sbjct: 119 --W----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 543 ----MIDQTHLT------TRVQGTFGYLDPEYFR-SSQFTEKSDVYSFGVVLVELL 587
+D +L T GT Y+ E + + EK D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 25/244 (10%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEFP----- 485
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 486 ------ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539
+T E + + +V+ + +L S I HRD+ + NILL +K K+ DFG +
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLA 195
Query: 540 RSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTD 597
R + D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 598 SEED 601
+E+
Sbjct: 256 IDEE 259
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 26/245 (10%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D N + LG+G G V + R VA+K K S
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEFP----- 485
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 486 -------ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGA 538
+T E + + +V+ + +L S I HRD+ + NILL +K K+ DFG
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGL 194
Query: 539 SRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRST 596
+R + D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 597 DSEED 601
+E+
Sbjct: 255 KIDEE 259
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 10/210 (4%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ + LG G G V+ G N VA+K K +++ F+ E ++ + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQH 66
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
+V+L + E ++ EF+ G+L ++ E + + + ++++ + Y+
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPE 563
I HRD+++AN+L+ + K++DFG +R +I+ T R F + PE
Sbjct: 126 ERKNYI---HRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPE 180
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
FT KS+V+SFG++L E++T G+ P
Sbjct: 181 AINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 40/227 (17%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV 449
+F ++G GG G V+K +G+ I++ K N E+ EV L++++H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKY----NNEKAEREVKALAKLDHVNIV 68
Query: 450 KLLGC-------------CLE----------------TEVPLLVYEFIPNGTLYQYIHDQ 480
GC LE T+ + EF GTL Q+I +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 481 TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E + + L + +++ + Y+HS I HRD+K +NI L D + K+ DFG
Sbjct: 129 RGE-KLDKVLALELFEQITKGVDYIHSKKLI---HRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 541 SVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELL 587
S+ D TR +GT Y+ PE S + ++ D+Y+ G++L ELL
Sbjct: 185 SLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNVV 449
F +G+G G V+KG+ ++VAIK L + + + I E+ +LSQ + V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
K G L+ ++ E++ G+ D E P+ I E+ L YLHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSAL----DLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQ 569
I HRDIK+AN+LL + K++DFG + + Q T V GT ++ PE + S
Sbjct: 125 KI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSA 180
Query: 570 FTEKSDVYSFGVVLVELLTGQKP 592
+ K+D++S G+ +EL G+ P
Sbjct: 181 YDSKADIWSLGITAIELARGEPP 203
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 12/198 (6%)
Query: 398 LGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNVVKLLGCC 455
+G+G G V+KG+ ++VAIK L + + + I E+ +LSQ + V K G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514
L+ ++ E++ G+ + +EF I ++ E+ L YLHS I
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-----EILKGLDYLHSEKKI--- 142
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKS 574
HRDIK+AN+LL ++ K++DFG + + Q T V GT ++ PE + S + K+
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKA 201
Query: 575 DVYSFGVVLVELLTGQKP 592
D++S G+ +EL G+ P
Sbjct: 202 DIWSLGITAIELAKGEPP 219
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 10/210 (4%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ + LG G G V+ G N VA+K K S ++ F+ E ++ + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQH 67
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
+V+L E ++ E++ G+L ++ E + + + ++++ + Y+
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLDPE 563
I HRD+++AN+L+ + K++DFG +R +I+ T R F + PE
Sbjct: 127 ERKNYI---HRDLRAANVLVSESLMCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPE 181
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
FT KSDV+SFG++L E++T G+ P
Sbjct: 182 AINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 396 RILGQGGQGTVYKGMLT-NGR---IVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVK 450
+++G G G V G L G+ VAIK K E F++E +I+ Q +H NV+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
L G ++ +++ EF+ NG+L ++ +F + + + I + + YL A
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI--AAGMKYL---AD 153
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT-TRVQG---TFGYLDPEYFR 566
+ HRD+ + NIL++ KVSDFG SR + D + T T G + PE +
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 567 SSQFTEKSDVYSFGVVLVELLT-GQKP 592
+FT SDV+S+G+V+ E+++ G++P
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 102/217 (47%), Gaps = 30/217 (13%)
Query: 396 RILGQGGQGTVYKGMLTNGR----IVAIKKSKLV------DESNIEQF----INEVAILS 441
R LG G G V NG I IKKS+ D NIE+F NE+++L
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVS 499
++H N++KL + + LV EF G L++ I + +E I ++
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-----NIMKQIL 156
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDK---YRAKVSDFGASRSVMIDQTHLTTRVQGT 556
+CYLH I HRDIK NILL++K K+ DFG S S L R+ GT
Sbjct: 157 SGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLS-SFFSKDYKLRDRL-GT 211
Query: 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
Y+ PE + ++ EK DV+S GV++ LL G P
Sbjct: 212 AYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 9/196 (4%)
Query: 398 LGQGGQGTV-YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL 456
+G+G G V +GR VA+K L + E NEV I+ H NVV++ L
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 457 ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHR 516
E ++ EF+ G L D + + E + V AL YLH+ I HR
Sbjct: 113 VGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQGVI---HR 165
Query: 517 DIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDV 576
DIKS +ILL R K+SDFG + D V GT ++ PE S + + D+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDI 224
Query: 577 YSFGVVLVELLTGQKP 592
+S G++++E++ G+ P
Sbjct: 225 WSLGIMVIEMVDGEPP 240
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 26/232 (11%)
Query: 383 MELEMATDNFNTNRILGQGGQGTVYK----GMLTNGRIVAIKKSKL---VDESNIEQFIN 435
++ E +N ++LG G G V G+ G + + L D S E ++
Sbjct: 38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMS 97
Query: 436 EVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---PITWEIR 491
E+ +++Q+ +H N+V LLG C + L++E+ G L Y+ + E+F I +E +
Sbjct: 98 ELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157
Query: 492 LRIAIE-------VSDALCYLHSAASIPIY-------HRDIKSANILLDDKYRAKVSDFG 537
R+ E D LC+ + A + HRD+ + N+L+ K+ DFG
Sbjct: 158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFG 217
Query: 538 ASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
+R +M D ++ + ++ PE +T KSDV+S+G++L E+ +
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ + LG G G V+ VA+K K S +E F+ E ++ + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQH 69
Query: 446 RNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIH-DQTEEFPITWEIRLRIAIEVSDALC 503
+VKL T+ P+ ++ EF+ G+L ++ D+ + P+ I + ++++ +
Sbjct: 70 DKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF--SAQIAEGMA 125
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLD 561
++ I HRD+++ANIL+ K++DFG +R +I+ T R F +
Sbjct: 126 FIEQRNYI---HRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTA 180
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE FT KSDV+SFG++L+E++T
Sbjct: 181 PEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 27/246 (10%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEFP----- 485
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 486 --------ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537
+T E + + +V+ + +L S I HRD+ + NILL +K K+ DFG
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 195
Query: 538 ASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRS 595
+R + D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 196 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
Query: 596 TDSEED 601
+E+
Sbjct: 256 VKIDEE 261
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E+ D + LG+G G V K VA+K K E ++ I+E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI---------------HDQ 480
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ H+
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 481 TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E+ ++ + + A +V+ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 144 EEQ--LSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 541 SVM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ ID TT + ++ PE +T +SDV+SFGV+L E+ T G P
Sbjct: 199 DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Query: 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
EE LF++L + + M+ + C + + +RPT K+
Sbjct: 259 EE----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
Query: 659 AFELGGIRA 667
+L I A
Sbjct: 303 VEDLDRIVA 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 27/246 (10%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEFP----- 485
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 486 --------ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537
+T E + + +V+ + +L S I HRD+ + NILL +K K+ DFG
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 193
Query: 538 ASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRS 595
+R + D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 194 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 596 TDSEED 601
+E+
Sbjct: 254 VKIDEE 259
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E+ D + LG+G G V K VA+K K E ++ I+E
Sbjct: 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 124
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI---------------HDQ 480
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ H+
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 481 TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E+ ++ + + A +V+ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 185 EEQ--LSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 541 SVM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ ID TT + ++ PE +T +SDV+SFGV+L E+ T G P
Sbjct: 240 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299
Query: 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
EE LF++L + + M+ + C + + +RPT K+
Sbjct: 300 EE----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 343
Query: 659 AFELGGIRA 667
+L I A
Sbjct: 344 VEDLDRIVA 352
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 396 RILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNI-----EQFINEVAILSQINHRNVV 449
++LG G GTVYKG+ + +G V I + V N ++ ++E +++ + V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+LLG CL + V L V + +P G L ++ + + + L ++++ + YL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGR--LGSQDLLNWCMQIAKGMSYLED-- 137
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRSS 568
+ + HRD+ + N+L+ K++DFG +R + ID+T + + ++ E
Sbjct: 138 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+FT +SDV+S+GV + EL+T G KP + E L+
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 21/243 (8%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLVY-EFIPNGTLYQYIHDQTEEF---PIT 487
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 488 WEIRLRIAIEVSDALCY-------LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E + + + +CY + AS HRD+ + NILL +K K+ DFG +R
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 541 SVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 188 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
Query: 599 EED 601
+E+
Sbjct: 248 DEE 250
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSK---LVDESNIEQFINEVAILSQINHR 446
NF + +G+G VY+ L +G VA+KK + L+D I E+ +L Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYL 505
NV+K +E +V E G L + I H + ++ I + +++ AL ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYF 565
HS + HRDIK AN+ + K+ D G R +T + GT Y+ PE
Sbjct: 153 HSRR---VMHRDIKPANVFITATGVVKLGDLGLGR-FFSSKTTAAHSLVGTPYYMSPERI 208
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ + KSD++S G +L E+ Q P
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 27/246 (10%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEFP----- 485
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 486 --------ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537
+T E + + +V+ + +L S I HRD+ + NILL +K K+ DFG
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 230
Query: 538 ASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRS 595
+R + D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 231 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
Query: 596 TDSEED 601
+E+
Sbjct: 291 VKIDEE 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 110/246 (44%), Gaps = 27/246 (10%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLVY-EFIPNGTLYQYIHDQTEEFP----- 485
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 486 --------ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537
+T E + + +V+ + +L S I HRD+ + NILL +K K+ DFG
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFG 184
Query: 538 ASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRS 595
+R + D ++ + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 596 TDSEED 601
+E+
Sbjct: 245 VKIDEE 250
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ + LG G G V+ VA+K K S +E F+ E ++ + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQH 242
Query: 446 RNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIH-DQTEEFPITWEIRLRIAIEVSDALC 503
+VKL T+ P+ ++ EF+ G+L ++ D+ + P+ I + ++++ +
Sbjct: 243 DKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF--SAQIAEGMA 298
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF--GYLD 561
++ I HRD+++ANIL+ K++DFG +R +I+ T R F +
Sbjct: 299 FIEQRNYI---HRDLRAANILVSASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTA 353
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT 588
PE FT KSDV+SFG++L+E++T
Sbjct: 354 PEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 120/253 (47%), Gaps = 24/253 (9%)
Query: 412 TNGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLE-TEVPL-LVYEF 467
++G+I+ K+ + E+ + ++EV +L ++ H N+V+ ++ T L +V E+
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 468 IPNGTLYQYIHDQTEEFP-ITWEIRLRIAIEVSDAL--CYLHSAASIPIYHRDIKSANIL 524
G L I T+E + E LR+ +++ AL C+ S + HRD+K AN+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 525 LDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLV 584
LD K K+ DFG +R + D + T V GT Y+ PE + EKSD++S G +L
Sbjct: 149 LDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 585 ELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRC 644
EL P + +E L G E F + R E EIIT R
Sbjct: 208 ELCALMPPFTAFSQKE---LAGKIREGK-----FRRIPYRYSDELN--EIIT------RM 251
Query: 645 LNMIGKKRPTMKE 657
LN+ RP+++E
Sbjct: 252 LNLKDYHRPSVEE 264
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 48/309 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E+ D + LG+G G V K VA+K K E ++ I+E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFP---------- 485
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ Q E P
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QAREPPGLEYSYNPSH 141
Query: 486 -----ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
++ + + A +V+ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 541 SVM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ ID TT + ++ PE +T +SDV+SFGV+L E+ T G P
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Query: 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
EE LF++L + + M+ + C + + +RPT K+
Sbjct: 259 EE----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
Query: 659 AFELGGIRA 667
+L I A
Sbjct: 303 VEDLDRIVA 311
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E+ D + LG+G G V K VA+K K E ++ I+E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI---------------HDQ 480
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ H+
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 481 TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E+ ++ + + A +V+ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 144 EEQ--LSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 541 SVM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ ID TT + ++ PE +T +SDV+SFGV+L E+ T G P
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Query: 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
EE LF++L + + M+ + C + + +RPT K+
Sbjct: 259 EE----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
Query: 659 AFELGGIRA 667
+L I A
Sbjct: 303 VEDLDRIVA 311
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 34/282 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 134
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
L + HRD+ + N+L+ K++DFG R+ ++ +G ++
Sbjct: 135 LEDRRLV---HRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620
E +T +SDV+S+GV + EL+T G KP + E S++ K RL +
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE------KGERLPQP 243
Query: 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662
I V M+ ++C + RP +E E
Sbjct: 244 PIC----------TIDVYMIMRKCWMIDADSRPKFRELIIEF 275
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 23/230 (10%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKG---------MLTNGRIVAIKKSKLVDE 427
T+L + + E +N + LG G G V + + + +K + DE
Sbjct: 25 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 84
Query: 428 SNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------D 479
E ++E+ I+S + H N+V LLG C L++ E+ G L ++ D
Sbjct: 85 K--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
Query: 480 QTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539
+ + P+ L + +V+ + +L S I HRD+ + N+LL + + AK+ DFG +
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLA 199
Query: 540 RSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
R +M D ++ + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 200 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E+ D + LG+G G V K VA+K K E ++ I+E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI---------------HDQ 480
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ H+
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 481 TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E+ ++ + + A +V+ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 129 EEQ--LSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 541 SVM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ ID TT + ++ PE +T +SDV+SFGV+L E+ T G P
Sbjct: 184 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 243
Query: 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
EE LF++L + + M+ + C + + +RPT K+
Sbjct: 244 EE----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 287
Query: 659 AFELGGIRA 667
+L I A
Sbjct: 288 VEDLDRIVA 296
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 26/262 (9%)
Query: 398 LGQGGQGTVYKGMLTNGR-IVAIKKSKLVDESNIEQFIN-EVAILSQINHRNVVKLLGCC 455
+G+G G VYKG+ + + +VAIK L + + + I E+ +LSQ + + + G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
L++ ++ E++ G+ D + P+ I E+ L YLHS I H
Sbjct: 87 LKSTKLWIIMEYLGGGSAL----DLLKPGPLEETYIATILREILKGLDYLHSERKI---H 139
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSD 575
RDIK+AN+LL ++ K++DFG + + Q V GT ++ PE + S + K+D
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKAD 198
Query: 576 VYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEII 635
++S G+ +EL G+ P ++D + L FL E ++ KE
Sbjct: 199 IWSLGITAIELAKGEPP--NSDLHPMRVL---FLIPKNSPPTLEGQHSKPFKE------- 246
Query: 636 TVAMLAKRCLNMIGKKRPTMKE 657
+ CLN + RPT KE
Sbjct: 247 ----FVEACLNKDPRFRPTAKE 264
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 11/213 (5%)
Query: 398 LGQGGQGTVYKGML-TNGRIVAIKKSKLVDESNIE-QFINEVAILSQINHRNVVKLLGCC 455
+G+G G V+ G L + +VA+K + +++ +F+ E IL Q +H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ + +V E + G ++ +TE + + L++ + + + YL S I H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLESKCCI---H 236
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTT--RVQGTFGYLDPEYFRSSQFTEK 573
RD+ + N L+ +K K+SDFG SR D + + Q + PE +++ +
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 574 SDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
SDV+SFG++L E + G P + +++ + V
Sbjct: 296 SDVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 23/230 (10%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKG---------MLTNGRIVAIKKSKLVDE 427
T+L + + E +N + LG G G V + + + +K + DE
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 428 SNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------D 479
E ++E+ I+S + H N+V LLG C L++ E+ G L ++ D
Sbjct: 93 K--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD 150
Query: 480 QTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539
+ + P+ L + +V+ + +L S I HRD+ + N+LL + + AK+ DFG +
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLA 207
Query: 540 RSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
R +M D ++ + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 208 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML-TNGR---IVAIK--KSKLVDESNIEQFINEVAI 439
E+ +++G G G V G L G+ VAIK K+ D+ F++E +I
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASI 83
Query: 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
+ Q +H N++ L G + + +++ E++ NG+L ++ F + + + I
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI--G 141
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG- 558
+ YL +++ HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 142 SGMKYLSDMSAV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 559 -YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E+ D + LG+G G V K VA+K K E ++ I+E
Sbjct: 13 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 72
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI---------------HDQ 480
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ H+
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 481 TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E+ ++ + + A +V+ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 133 EEQ--LSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 541 SVM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ ID TT + ++ PE +T +SDV+SFGV+L E+ T G P
Sbjct: 188 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 247
Query: 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
EE LF++L + + M+ + C + + +RPT K+
Sbjct: 248 EE----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 291
Query: 659 AFELGGIRA 667
+L I A
Sbjct: 292 VEDLDRIVA 300
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNVV 449
F +G+G G V+KG+ ++VAIK L + + + I E+ +LSQ + V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
K G L+ ++ E++ G+ D E P+ I E+ L YLHS
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSAL----DLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQ 569
I HRDIK+AN+LL + K++DFG + + Q V GT ++ PE + S
Sbjct: 140 KI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSA 195
Query: 570 FTEKSDVYSFGVVLVELLTGQKP 592
+ K+D++S G+ +EL G+ P
Sbjct: 196 YDSKADIWSLGITAIELARGEPP 218
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 134
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
L + HRD+ + N+L+ K++DFG R+ ++ +G ++
Sbjct: 135 LEDRRLV---HRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620
E +T +SDV+S+GV + EL+T G KP + E S++ K RL +
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE------KGERLPQP 243
Query: 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662
I V M+ ++C + RP +E E
Sbjct: 244 PIC----------TIDVYMIMRKCWMIDADSRPKFRELIIEF 275
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 23/226 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG A+ ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKPI-RSTDSEEDKS 603
+ PE + +F E DV+S G+VL +L G+ P + +DS ++ S
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS 218
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 44/307 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E+ D + LG+G G V K VA+K K E ++ I+E
Sbjct: 16 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 75
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E ++ + + A +V+ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDI 192
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV+L E+ T G P EE
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 252
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 253 ----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 296
Query: 661 ELGGIRA 667
+L I A
Sbjct: 297 DLDRIVA 303
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E+ D + LG+G G V K VA+K K E ++ I+E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI---------------HDQ 480
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ H+
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 481 TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E+ ++ + + A +V+ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 144 EEQ--LSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 541 SVM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ ID TT + ++ PE +T +SDV+SFGV+L E+ T G P
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
Query: 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
EE LF++L + + M+ + C + + +RPT K+
Sbjct: 259 EE----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
Query: 659 AFELGGIRA 667
+L I A
Sbjct: 303 VEDLDRIVA 311
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEF---PIT 487
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 488 WEIRLRIAIEVSDALCY-------LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E + + + +CY + AS HRD+ + NILL +K K+ DFG +R
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 541 SVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
Query: 599 EED 601
+E+
Sbjct: 257 DEE 259
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 108/212 (50%), Gaps = 9/212 (4%)
Query: 398 LGQGGQGTVYKGML-TNGRIVAIKKSKLVDESNIE-QFINEVAILSQINHRNVVKLLGCC 455
+G+G G V+ G L + +VA+K + +++ +F+ E IL Q +H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+ + +V E + G ++ +TE + + L++ + + + YL S I H
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLESKCCI---H 236
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV-QGTFGYLDPEYFRSSQFTEKS 574
RD+ + N L+ +K K+SDFG SR + + Q + PE +++ +S
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSES 296
Query: 575 DVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
DV+SFG++L E + G P + +++ + V
Sbjct: 297 DVWSFGILLWETFSLGASPYPNLSNQQTREFV 328
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 110/236 (46%), Gaps = 45/236 (19%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
L A+D F +LGQG G V K + R AIKK + +E + ++EV +L+ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASL 59
Query: 444 NHRNVVKLLGCCLE--------TEVP-----LLVYEFIPNGTLYQYIH-----DQTEEFP 485
NH+ VV+ LE T V + E+ N TLY IH Q +E+
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY- 118
Query: 486 ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV--- 542
W R+ ++ +AL Y+HS I HRD+K NI +D+ K+ DFG +++V
Sbjct: 119 --W----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 543 ----MIDQTHLT------TRVQGTFGYLDPEYFR-SSQFTEKSDVYSFGVVLVELL 587
+D +L T GT Y+ E + + EK D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E+ D + LG+G G V K VA+K K E ++ I+E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI---------------HDQ 480
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ H+
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 481 TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E+ ++ + + A +V+ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 137 EEQ--LSSKDLVSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 541 SVM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ ID TT + ++ PE +T +SDV+SFGV+L E+ T G P
Sbjct: 192 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 251
Query: 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658
EE LF++L + + M+ + C + + +RPT K+
Sbjct: 252 EE----------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 295
Query: 659 AFELGGIRA 667
+L I A
Sbjct: 296 VEDLDRIVA 304
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNVV 449
F +G+G G V+KG+ ++VAIK L + + + I E+ +LSQ + V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
K G L+ ++ E++ G+ D E P+ I E+ L YLHS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSAL----DLLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQ 569
I HRDIK+AN+LL + K++DFG + + Q V GT ++ PE + S
Sbjct: 125 KI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSA 180
Query: 570 FTEKSDVYSFGVVLVELLTGQKP 592
+ K+D++S G+ +EL G+ P
Sbjct: 181 YDSKADIWSLGITAIELARGEPP 203
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 395 NRILGQGGQGTVYKGMLTN------GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
R LG+G G V+ N +VA+K K + + F E +L+ + H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIR-----------LRIA 495
VK G C + + ++V+E++ +G L +++ H + + R L IA
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-IDQTHLTTRVQ 554
+++ + YL AS HRD+ + N L+ K+ DFG SR V D +
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
++ PE +FT +SDV+SFGV+L E+ T G++P
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEF---PIT 487
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 488 WEIRLRIAIEVSDALCY-------LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E + + + +CY + AS HRD+ + NILL +K K+ DFG +R
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 541 SVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 188 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
Query: 599 EED 601
+E+
Sbjct: 248 DEE 250
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEF---PIT 487
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 488 WEIRLRIAIEVSDALCY-------LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E + + + +CY + AS HRD+ + NILL +K K+ DFG +R
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 541 SVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 197 DIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
Query: 599 EED 601
+E+
Sbjct: 257 DEE 259
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 21/243 (8%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLVY-EFIPNGTLYQYIHDQTEEF---PIT 487
++E+ IL I H NVV LLG C + PL+V EF G L Y+ + EF +
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 488 WEIRLRIAIEVSDALCY-------LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540
E + + + +CY + AS HRD+ + NILL +K K+ DFG +R
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 541 SVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598
+ D + + ++ PE +T +SDV+SFGV+L E+ + G P
Sbjct: 188 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
Query: 599 EED 601
+E+
Sbjct: 248 DEE 250
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 30/280 (10%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 135
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 136 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
+T +SDV+S+GV + EL+T G KP + E S++ K RL +
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE------KGERLPQPPI 246
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662
I V M+ ++C + RP +E E
Sbjct: 247 C----------TIDVYMIMRKCWMIDADSRPKFRELIIEF 276
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEIXIN 59
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG A+ ++ L ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEIXIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG A+ ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 386 EMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQI 443
E+ D+F LG G G V+K +G ++A K L + I Q I E+ +L +
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
N +V G + E + G+L Q + I +I +++I V L
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLT 137
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+K +NIL++ + K+ DFG S +ID + GT Y+ PE
Sbjct: 138 YLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ-LIDS--MANSFVGTRSYMSPE 192
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ + ++ +SD++S G+ LVE+ G+ PI S
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 24/253 (9%)
Query: 412 TNGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLE-TEVPL-LVYEF 467
++G+I+ K+ + E+ + ++EV +L ++ H N+V+ ++ T L +V E+
Sbjct: 29 SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88
Query: 468 IPNGTLYQYIHDQTEEFP-ITWEIRLRIAIEVSDAL--CYLHSAASIPIYHRDIKSANIL 524
G L I T+E + E LR+ +++ AL C+ S + HRD+K AN+
Sbjct: 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148
Query: 525 LDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLV 584
LD K K+ DFG +R ++ T GT Y+ PE + EKSD++S G +L
Sbjct: 149 LDGKQNVKLGDFGLAR-ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 585 ELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRC 644
EL P + +E L G E F + R E EIIT R
Sbjct: 208 ELCALMPPFTAFSQKE---LAGKIREGK-----FRRIPYRYSDELN--EIIT------RM 251
Query: 645 LNMIGKKRPTMKE 657
LN+ RP+++E
Sbjct: 252 LNLKDYHRPSVEE 264
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 268 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 661 ELGGI 665
+L I
Sbjct: 312 DLDRI 316
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 136
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
L + HRD+ + N+L+ K++DFG R+ ++ +G ++
Sbjct: 137 LEDRRLV---HRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
E +T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 134
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
L + HRD+ + N+L+ K++DFG R+ ++ +G ++
Sbjct: 135 LEDRRLV---HRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
E +T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 268 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 661 ELGGI 665
+L I
Sbjct: 312 DLDRI 316
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 14/216 (6%)
Query: 391 NFNTNRILGQGGQGTVY----KGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHR 446
+FN +LG+G G V KG I +KK ++ + ++E + E +L+ ++
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 447 NVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
+ L C +T L V E++ G L +I Q +F + A E+S L +L
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVFY--AAEISIGLFFL 136
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPEY 564
H I +RD+K N++LD + K++DFG + M+D +TTR GT Y+ PE
Sbjct: 137 HKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG--VTTREFCGTPDYIAPEI 191
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + D +++GV+L E+L GQ P D +E
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 10/209 (4%)
Query: 386 EMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIE-QFINEVAILSQI 443
E+ D+F LG G G V+K +G ++A K L + I Q I E+ +L +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
N +V G + E + G+L Q + I +I +++I V L
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLT 121
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YL I HRD+K +NIL++ + K+ DFG S +ID+ + GT Y+ PE
Sbjct: 122 YLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQ-LIDE--MANEFVGTRSYMSPE 176
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ + ++ +SD++S G+ LVE+ G+ P
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKG-MLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +LG+G VY+ + G VAIK K + +++ NEV I Q+ H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
++++L ++ LV E NG + +Y+ ++ + F E R ++ + YL
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN-EAR-HFMHQIITGMLYL 128
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS I HRD+ +N+LL K++DFG A++ M + H T + GT Y+ PE
Sbjct: 129 HSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
S +SDV+S G + LL G+ P
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 79 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 135
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 136 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 30/280 (10%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 132
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 133 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
+T +SDV+S+GV + EL+T G KP + E S++ K RL +
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE------KGERLPQPPI 243
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662
I V M+ ++C + RP +E E
Sbjct: 244 C----------TIDVYMIMRKCWMIDADSRPKFRELIIEF 273
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 133
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 134 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL C + E + NG L +YI + F T R A E+ AL YL
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 153
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 154 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 130/283 (45%), Gaps = 30/283 (10%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 142
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 143 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622
+T +SDV+S+GV + EL+T G KP + E S++ K RL +
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE------KGERLPQPPI 253
Query: 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665
I V M+ ++C + RP +E E +
Sbjct: 254 C----------TIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 139
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
L + HRD+ + N+L+ K++DFG R+ ++ +G ++
Sbjct: 140 LEDRRLV---HRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
E +T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 136
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 137 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L +++++ + Y
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAEGMNY 129
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 130 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 229
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 132
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
L + HRD+ + N+L+ K++DFG R+ ++ +G ++
Sbjct: 133 LEDRRLV---HRDLAARNVLVKTPQHVKITDFG--RAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
E +T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 59
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+ +NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 60 AMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG A+ ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 59
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG A+ ++ L ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAAGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML-TNGR---IVAIK--KSKLVDESNIEQFINEVAI 439
E+ +++G G G V G L G+ VAIK K+ D+ F++E +I
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASI 62
Query: 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
+ Q +H N++ L G + + +++ E++ NG+L ++ F + + + I
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI--G 120
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG- 558
+ YL + + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 121 SGMKYLSDMSYV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 559 -YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 134
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 135 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 133
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 134 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 76 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 132
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 133 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGML-TNGR---IVAIK--KSKLVDESNIEQFINEVAI 439
E+ +++G G G V G L G+ VAIK K+ D+ F++E +I
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASI 68
Query: 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
+ Q +H N++ L G + + +++ E++ NG+L ++ F + + + I
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGI--G 126
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG- 558
+ YL + + HRD+ + NIL++ KVSDFG SR + D T G
Sbjct: 127 SGMKYLSDMSYV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 559 -YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 59
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG A+ ++ L ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 59
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG A+ ++ L ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 132
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 133 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 396 RILGQGGQGTVYKGMLT-NGR---IVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVK 450
+++G G G V G L G+ VAIK K E F++E +I+ Q +H NV+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
L G ++ +++ EF+ NG+L ++ +F + + + I + + YL A
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI--AAGMKYL---AD 127
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG-----YLDPEYF 565
+ HR + + NIL++ KVSDFG SR + D T T G + PE
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 566 RSSQFTEKSDVYSFGVVLVELLT-GQKP 592
+ +FT SDV+S+G+V+ E+++ G++P
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 59
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG A+ ++ L ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSE 90
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 268 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 661 ELGGI 665
+L I
Sbjct: 312 DLDRI 316
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 135
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 136 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 268 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 661 ELGGI 665
+L I
Sbjct: 312 DLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 268 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 661 ELGGI 665
+L I
Sbjct: 312 DLDRI 316
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 18/237 (7%)
Query: 376 KTKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGR-------IVAIKKSKLVDES 428
+T T ++ +NF ++LG G G V+ +G + +KK+ +V ++
Sbjct: 40 RTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA 99
Query: 429 NI-EQFINEVAILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPI 486
E E +L I + L +TE L L+ ++I G L+ ++ Q E F
Sbjct: 100 KTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-SQRERF-T 157
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546
E+++ + E+ AL +LH + I +RDIK NILLD ++DFG S+ + D+
Sbjct: 158 EHEVQIYVG-EIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 213
Query: 547 THLTTRVQGTFGYLDPEYFRS--SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEED 601
T GT Y+ P+ R S + D +S GV++ ELLTG P + D E++
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF-TVDGEKN 269
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 139
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 140 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 135
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 136 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 4 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 57
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 114
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 115 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 138
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 139 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 238
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEIXIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG-ASRSVMIDQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG A+ ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 132
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 133 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 25/277 (9%)
Query: 389 TDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKL--VDESNIEQFINEVAILSQINH 445
+++ +G G G K ++G+I+ K+ + E+ + ++EV +L ++ H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 446 RNVVKLLGCCLE-TEVPL-LVYEFIPNGTLYQYIHDQTEEFP-ITWEIRLRIAIEVSDAL 502
N+V+ ++ T L +V E+ G L I T+E + E LR+ +++ AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 503 --CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
C+ S + HRD+K AN+ LD K K+ DFG +R + D+ V GT Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYM 183
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620
PE + EKSD++S G +L EL P + +E L G E F
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAGKIREGK-----FRR 235
Query: 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ R E EIIT R LN+ RP+++E
Sbjct: 236 IPYRYSDELN--EIIT------RMLNLKDYHRPSVEE 264
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 101 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 157
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 158 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 257
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 543 -MIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 268 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 661 ELGGI 665
+L I
Sbjct: 312 DLDRI 316
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 134
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 135 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 59
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 389 TDNFNTNRILGQGGQGTVY--KGMLTNGR--IVAIKKSKLVDESNIEQFINEVAILSQIN 444
+D + + LG G G V K LT I IKKS + SN ++EVA+L Q++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N++KL + LV E G L+ I + + + + I +V Y
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTY 136
Query: 505 LHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
LH I HRD+K N+LL+ K R K+ DFG S + + R+ GT Y+
Sbjct: 137 LHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL-GTAYYIA 191
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE R ++ EK DV+S GV+L LL G P +E
Sbjct: 192 PEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 229
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 58
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 115
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 116 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++LG G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 126
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 127 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 226
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 115/224 (51%), Gaps = 22/224 (9%)
Query: 391 NFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
N+ + +G+G V + +LT GR VA+K K++L + +++++ EV I+ +NH
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQL-NPTSLQKLFREVRIMKILNH 73
Query: 446 RNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDAL 502
N+VKL +ETE L LV E+ G ++ Y+ H + +E + R ++ A+
Sbjct: 74 PNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVSAV 127
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
Y H I HRD+K+ N+LLD K++DFG S + T G+ Y P
Sbjct: 128 QYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAAP 182
Query: 563 EYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
E F+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVDESNI----EQFINEVAIL 440
++++ + LG+G G V L R+ VA+K +VD E E+ I
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVK---IVDMKRAVDCPENIKKEICIN 59
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+NH NVVK G E + L E+ G L+ I + + R ++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMA 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGY 559
+ YLH I I HRDIK N+LLD++ K+SDFG + ++ L ++ GT Y
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 560 LDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKP 592
+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 29/236 (12%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKG---------MLTNGRIVAIKKSKLVDE 427
T+L + + E +N + LG G G V + + + +K + DE
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 428 SNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFI-------------PNGTL 473
E ++E+ I+S + H N+V LLG C L++ E+ P G
Sbjct: 93 K--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLE 150
Query: 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKV 533
Y Y E ++ L + +V+ + +L S I HRD+ + N+LL + + AK+
Sbjct: 151 YSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKI 207
Query: 534 SDFGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
DFG +R +M D ++ + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 79
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDI 196
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 256
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 257 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
Query: 661 ELGGI 665
+L I
Sbjct: 301 DLDRI 305
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 132/306 (43%), Gaps = 46/306 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVY----------EFI----PNGTLYQYIHDQT 481
+ ++ I H+N++ LLG C + + PL V E++ P G Y Y ++
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQ-DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 482 EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARD 206
Query: 542 VM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ ID TT + ++ PE +T +SDV+SFGV++ E+ T G P E
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
Query: 600 EDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAA 659
E LF++L + + M+ + C + + +RPT K+
Sbjct: 267 E----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 660 FELGGI 665
+L I
Sbjct: 311 EDLDRI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 77
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLTARNVLVTENNVMKIADFGLARDI 194
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 255 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
Query: 661 ELGGI 665
+L I
Sbjct: 299 DLDRI 303
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + +++DFG +R +
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 268 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 661 ELGGI 665
+L I
Sbjct: 312 DLDRI 316
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 132/306 (43%), Gaps = 46/306 (15%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 90
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVY----------EFI----PNGTLYQYIHDQT 481
+ ++ I H+N++ LLG C + + PL V E++ P G Y Y ++
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQ-DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 482 EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARD 206
Query: 542 VM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
+ ID TT + ++ PE +T +SDV+SFGV++ E+ T G P E
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 266
Query: 600 EDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAA 659
E LF++L + + M+ + C + + +RPT K+
Sbjct: 267 E----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 660 FELGGI 665
+L I
Sbjct: 311 EDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 82
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDI 199
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 259
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 260 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
Query: 661 ELGGI 665
+L I
Sbjct: 304 DLDRI 308
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 389 TDNFNTNRILGQGGQGTVY--KGMLTNGR--IVAIKKSKLVDESNIEQFINEVAILSQIN 444
+D + + LG G G V K LT I IKKS + SN ++EVA+L Q++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N++KL + LV E G L+ I + + + + I +V Y
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVLSGTTY 119
Query: 505 LHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
LH I HRD+K N+LL+ K R K+ DFG S + + R+ GT Y+
Sbjct: 120 LHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL-GTAYYIA 174
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI-RSTDSE 599
PE R ++ EK DV+S GV+L LL G P TD E
Sbjct: 175 PEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCC 455
+G+G G VYK + GRIVA+K+ +L DE I E+++L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALCYLHSAASIPIY 514
LV+EF+ + + D+ + +I++ + + A C+ H I
Sbjct: 89 HSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-----IL 141
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR-SSQFTEK 573
HRD+K N+L++ K++DFG +R+ I T V T Y P+ S +++
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 574 SDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
D++S G + E++TG KP+ +++D+
Sbjct: 201 VDIWSIGCIFAEMITG-KPLFPGVTDDDQ 228
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 13/242 (5%)
Query: 380 FTSMELEMATDN-FNTNRILGQGGQGTVYKGML-TNGRIVAIKKSKLVDESNIE---QFI 434
+ +E + T N F R+LG+GG G V + G++ A KK + + +
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 435 NEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEE-FPITWEIRLR 493
NE IL ++N R VV L + LV + G L +I+ + FP R
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-----EAR 287
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553
++ C L I +RD+K NILLDD ++SD G + V QT + RV
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV 346
Query: 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613
GT GY+ PE ++ ++T D ++ G +L E++ GQ P + + + V ++ +
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 614 EN 615
E
Sbjct: 406 EE 407
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCC 455
+G+G G VYK + GRIVA+K+ +L DE I E+++L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALCYLHSAASIPIY 514
LV+EF+ + + D+ + +I++ + + A C+ H I
Sbjct: 89 HSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-----IL 141
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR-SSQFTEK 573
HRD+K N+L++ K++DFG +R+ I T V T Y P+ S +++
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTS 200
Query: 574 SDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
D++S G + E++TG KP+ +++D+
Sbjct: 201 VDIWSIGCIFAEMITG-KPLFPGVTDDDQ 228
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 386 EMATDNFNTNRILGQGGQGTVY--------KGMLTNGRIVAIKKSKL-VDESNIEQFINE 436
E D + LG+G G V K VA+K K E ++ ++E
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136
Query: 437 VAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIH-------------DQTE 482
+ ++ I H+N++ LLG C + ++ E+ G L +Y+ ++
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
E +T++ + +++ + YL S I HRD+ + N+L+ + K++DFG +R +
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDI 253
Query: 543 M-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
ID TT + ++ PE +T +SDV+SFGV++ E+ T G P EE
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
LF++L + + M+ + C + + +RPT K+
Sbjct: 314 ----------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
Query: 661 ELGGI 665
+L I
Sbjct: 358 DLDRI 362
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 383 MELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILS 441
+E + D +LG+G G VY G L+N +AIK+ D + E+A+
Sbjct: 15 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 74
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
+ H+N+V+ LG E + E +P G+L + + + ++ +
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRA--KVSDFGASRSVMIDQTHLTTRVQGTFGY 559
L YLH I HRDIK N+L+ + Y K+SDFG S+ + T GT Y
Sbjct: 135 LKYLHDNQ---IVHRDIKGDNVLI-NTYSGVLKISDFGTSKR-LAGINPCTETFTGTLQY 189
Query: 560 LDPEYFRSSQ--FTEKSDVYSFGVVLVELLTGQKP 592
+ PE + + +D++S G ++E+ TG+ P
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 143/323 (44%), Gaps = 44/323 (13%)
Query: 385 LEMATDNFNTNRILGQGGQGTV----YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAIL 440
L+M ++++ +++G+G G V +K + + K +++ S+ F E I+
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 441 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+ N VV+L + + +V E++P G L + + + P W + A EV
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY--DVPEKWA-KFYTA-EVVL 185
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT---HLTTRVQGTF 557
AL +HS I HRD+K N+LLD K++DFG + +D+T H T V GT
Sbjct: 186 ALDAIHSMGLI---HRDVKPDNMLLDKHGHLKLADFGT--CMKMDETGMVHCDTAV-GTP 239
Query: 558 GYLDPEYFRSS----QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613
Y+ PE +S + + D +S GV L E+L G P + SLVG + + M
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD------SLVGTYSKIMD 293
Query: 614 -ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIG------KKRPTMKEAAFELGGIR 666
+N L DA + K AK + A L R + + K+ P K + IR
Sbjct: 294 HKNSLCFPEDAEISKHAKN---LICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIR 350
Query: 667 AS-------IGDSIMQHNCDDID 682
+ + I N DDI+
Sbjct: 351 ETAAPVVPELSSDIDSSNFDDIE 373
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 383 MELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILS 441
+E + D +LG+G G VY G L+N +AIK+ D + E+A+
Sbjct: 1 LEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
+ H+N+V+ LG E + E +P G+L + + + ++ +
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRA--KVSDFGASRSVMIDQTHLTTRVQGTFGY 559
L YLH I HRDIK N+L+ + Y K+SDFG S+ + T GT Y
Sbjct: 121 LKYLHDNQ---IVHRDIKGDNVLI-NTYSGVLKISDFGTSKR-LAGINPCTETFTGTLQY 175
Query: 560 LDPEYFRSSQ--FTEKSDVYSFGVVLVELLTGQKP 592
+ PE + + +D++S G ++E+ TG+ P
Sbjct: 176 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 112/224 (50%), Gaps = 16/224 (7%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIK------KSKLVDESNIEQFINEVAILSQI 443
F ++LG G GTVYKG+ + G V I + ++N ++ ++E +++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN-KEILDEAYVMASV 108
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
++ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ +
Sbjct: 109 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMN 165
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDP 562
YL + HRD+ + N+L+ K++DFG ++ + ++ + ++
Sbjct: 166 YLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 563 EYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
E +T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 223 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 266
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 13/242 (5%)
Query: 380 FTSMELEMATDN-FNTNRILGQGGQGTVYKGML-TNGRIVAIKKSKLVDESNIE---QFI 434
+ +E + T N F R+LG+GG G V + G++ A KK + + +
Sbjct: 173 WKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL 232
Query: 435 NEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEE-FPITWEIRLR 493
NE IL ++N R VV L + LV + G L +I+ + FP R
Sbjct: 233 NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-----EAR 287
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553
++ C L I +RD+K NILLDD ++SD G + V QT + RV
Sbjct: 288 AVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV 346
Query: 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613
GT GY+ PE ++ ++T D ++ G +L E++ GQ P + + + V ++ +
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 614 EN 615
E
Sbjct: 406 EE 407
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 380 FTSMEL--EMATDNFNTNRILGQGGQGTVYKGMLT----NGRIVAIKKSKL-VDESNIEQ 432
+ SME E+ ++G G G V +G L VAIK K E +
Sbjct: 2 WGSMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 61
Query: 433 FINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRL 492
F++E +I+ Q H N+++L G + +++ EF+ NG L ++ +F + + +
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 493 RIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV---MIDQTHL 549
I + + YL A + HRD+ + NIL++ KVSDFG SR + D T+
Sbjct: 122 LRGI--ASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY- 175
Query: 550 TTRVQGTFG--YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
T+ + G + PE +FT SD +S+G+V+ E+++ G++P
Sbjct: 176 TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 118/234 (50%), Gaps = 22/234 (9%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFIN 435
TS + + N+ + +G+G V + +LT G+ VA+K K++L + S++++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQL-NSSSLQKLFR 62
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRL 492
EV I+ +NH N+VKL +ETE L LV E+ G ++ Y+ H + +E + R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 493 RIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
++ A+ Y H I HRD+K+ N+LLD K++DFG S T
Sbjct: 121 ----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 171
Query: 553 VQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
G+ Y PE F+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 23/221 (10%)
Query: 396 RILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQINHRNV 448
R+L G+G K L GR VAIK K++L + +++++ EV I+ +NH N+
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNI 73
Query: 449 VKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL +ETE L L+ E+ G ++ Y+ H + +E + R ++ A+ Y
Sbjct: 74 VKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQYC 127
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYF 565
H I HRD+K+ N+LLD K++DFG S + T G+ Y PE F
Sbjct: 128 HQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPYAAPELF 182
Query: 566 RSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 223
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKG---------MLTNGRIVAIKKSKLVDE 427
T+L + + E +N + LG G G V + + + +K + DE
Sbjct: 18 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 77
Query: 428 SNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF-- 484
E ++E+ I+S + H N+V LLG C L++ E+ G L ++ + E
Sbjct: 78 K--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 485 ------------------PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD 526
P+ L + +V+ + +L S I HRD+ + N+LL
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLT 192
Query: 527 DKYRAKVSDFGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVE 585
+ + AK+ DFG +R +M D ++ + ++ PE +T +SDV+S+G++L E
Sbjct: 193 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 252
Query: 586 LLT 588
+ +
Sbjct: 253 IFS 255
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 112/223 (50%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++L G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L++ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 83 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 139
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 140 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 118/234 (50%), Gaps = 22/234 (9%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFIN 435
TS + + N+ + +G+G V + +LT G+ VA+K K++L + S++++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQL-NSSSLQKLFR 62
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRL 492
EV I+ +NH N+VKL +ETE L LV E+ G ++ Y+ H + +E + R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 493 RIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
++ A+ Y H I HRD+K+ N+LLD K++DFG S T
Sbjct: 121 ----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 171
Query: 553 VQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
G+ Y PE F+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 23/230 (10%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAI 439
MA + R+L G+G K L G+ VA+K K++L + S++++ EV I
Sbjct: 1 MADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRI 59
Query: 440 LSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAI 496
+ +NH N+VKL +ETE L LV E+ G ++ Y+ H +E + R
Sbjct: 60 MKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR----- 113
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++ A+ Y H I HRD+K+ N+LLD K++DFG S T G+
Sbjct: 114 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGS 168
Query: 557 FGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
Y PE F+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 218
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 148
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
++ SD+++ G ++ +L+ G P R+
Sbjct: 206 LTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 111/223 (49%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++L G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 139
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 140 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 45/236 (19%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQI 443
L A+D F +LGQG G V K + R AIKK + +E + ++EV +L+ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVXLLASL 59
Query: 444 NHRNVVKLLGCCLE--------TEVP-----LLVYEFIPNGTLYQYIH-----DQTEEFP 485
NH+ VV+ LE T V + E+ N TLY IH Q +E+
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY- 118
Query: 486 ITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV--- 542
W R+ ++ +AL Y+HS I HR++K NI +D+ K+ DFG +++V
Sbjct: 119 --W----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 543 ----MIDQTHLT------TRVQGTFGYLDPEYFR-SSQFTEKSDVYSFGVVLVELL 587
+D +L T GT Y+ E + + EK D YS G++ E +
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 148
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S++NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILL---DDKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 161 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 214
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 23/221 (10%)
Query: 396 RILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQINHRNV 448
R+L G+G K L GR VAIK K++L + +++++ EV I+ +NH N+
Sbjct: 18 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNI 76
Query: 449 VKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL +ETE L L+ E+ G ++ Y+ H + +E + R ++ A+ Y
Sbjct: 77 VKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVSAVQYC 130
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYF 565
H I HRD+K+ N+LLD K++DFG S + G Y PE F
Sbjct: 131 HQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELF 185
Query: 566 RSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 387 MATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIEQF---INEVAILSQ 442
M D F R+LG+GG G V+ M G++ A KK + + + E IL++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 443 INHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIR-LRIAIEVSD 500
++ R +V L ET+ L LV + G + +I++ E+ P E R + ++
Sbjct: 242 VHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
L +LH I +RD+K N+LLDD ++SD G + + QT T GT G++
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE-EDKSLVGYFLE 610
PE ++ D ++ GV L E++ + P R+ + E+K L LE
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 33/245 (13%)
Query: 386 EMATDNFNTNRILGQGGQGTVYK----GMLTNGRIVAIKKSKLVDESNIEQ---FINEVA 438
E +N R +G+G G V++ G+L + L +E++ + F E A
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF-------------- 484
++++ ++ N+VKLLG C + L++E++ G L +++ +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 485 -------PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537
P++ +L IA +V+ + YL + HRD+ + N L+ + K++DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFG 219
Query: 538 ASRSVM-IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRS 595
SR++ D ++ PE +++T +SDV+++GVVL E+ + G +P
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279
Query: 596 TDSEE 600
EE
Sbjct: 280 MAHEE 284
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 111/223 (49%), Gaps = 14/223 (6%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGR----IVAIKKSKLVDESNI-EQFINEVAILSQIN 444
F ++L G GTVYKG+ + G VAIK+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
+ +V +LLG CL + V L+ + +P G L Y+ + + I + L ++++ + Y
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNY 132
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR-VQGTFGYLDPE 563
L + HRD+ + N+L+ K++DFG ++ + ++ + ++ E
Sbjct: 133 LEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLV 605
+T +SDV+S+GV + EL+T G KP + E S++
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 128 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 219
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S++NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 147 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 200
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 151
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 152 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 209 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 387 MATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIEQF---INEVAILSQ 442
M D F R+LG+GG G V+ M G++ A KK + + + E IL++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 443 INHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIR-LRIAIEVSD 500
++ R +V L ET+ L LV + G + +I++ E+ P E R + ++
Sbjct: 242 VHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
L +LH I +RD+K N+LLDD ++SD G + + QT T GT G++
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE-EDKSLVGYFLE 610
PE ++ D ++ GV L E++ + P R+ + E+K L LE
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 387 MATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIEQF---INEVAILSQ 442
M D F R+LG+GG G V+ M G++ A KK + + + E IL++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 443 INHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIR-LRIAIEVSD 500
++ R +V L ET+ L LV + G + +I++ E+ P E R + ++
Sbjct: 242 VHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
L +LH I +RD+K N+LLDD ++SD G + + QT T GT G++
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE-EDKSLVGYFLE 610
PE ++ D ++ GV L E++ + P R+ + E+K L LE
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 12/231 (5%)
Query: 387 MATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIEQF---INEVAILSQ 442
M D F R+LG+GG G V+ M G++ A KK + + + E IL++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 443 INHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIR-LRIAIEVSD 500
++ R +V L ET+ L LV + G + +I++ E+ P E R + ++
Sbjct: 242 VHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
L +LH I +RD+K N+LLDD ++SD G + + QT T GT G++
Sbjct: 301 GLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFM 356
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE-EDKSLVGYFLE 610
PE ++ D ++ GV L E++ + P R+ + E+K L LE
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE 407
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 146 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 199
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILL---DDKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 138 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 191
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 192 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 245
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGG-QGTVYKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 146
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 128 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 22/234 (9%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFIN 435
TS + + N+ + +G+G V + +LT G+ VA+K K++L + S++++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQL-NSSSLQKLFR 62
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRL 492
EV I+ +NH N+VKL +ETE L LV E+ G ++ Y+ H + +E + R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 493 RIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
++ A+ Y H I HRD+K+ N+LLD K++DFG S
Sbjct: 121 ----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDA 171
Query: 553 VQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
G Y PE F+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 27/234 (11%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKG---------MLTNGRIVAIKKSKLVDE 427
T+L + + E +N + LG G G V + + + +K + DE
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 428 SNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTE---- 482
E ++E+ I+S + H N+V LLG C L++ E+ G L ++ ++
Sbjct: 93 K--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 483 --EFPI---TWEIR--LRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535
F I T R L + +V+ + +L S I HRD+ + N+LL + + AK+ D
Sbjct: 151 DPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGD 207
Query: 536 FGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
FG +R +M D ++ + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 397 ILGQGGQGTVYKGMLT----NGRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKL 451
++G G G V +G L VAIK K E +F++E +I+ Q H N+++L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
G + +++ EF+ NG L ++ +F + + + I + + YL A +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI--ASGMRYL---AEM 137
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL--TTRVQGTFG--YLDPEYFRS 567
HRD+ + NIL++ KVSDFG SR + + + T+ + G + PE
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 568 SQFTEKSDVYSFGVVLVELLT-GQKP 592
+FT SD +S+G+V+ E+++ G++P
Sbjct: 198 RKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 148
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 22/234 (9%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFIN 435
TS + + N+ + +G+G V + +LT G+ VA++ K++L + S++++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQL-NSSSLQKLFR 62
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRL 492
EV I+ +NH N+VKL +ETE L LV E+ G ++ Y+ H + +E + R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 493 RIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
++ A+ Y H I HRD+K+ N+LLD K++DFG S T
Sbjct: 121 ----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 171
Query: 553 VQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
G+ Y PE F+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 146
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV-QGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 149
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 150 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 148
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 120 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEI 175
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 148
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 22/234 (9%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFIN 435
TS + + N+ + +G+G V + +LT G+ VA++ K++L + S++++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQL-NSSSLQKLFR 62
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRL 492
EV I+ +NH N+VKL +ETE L LV E+ G ++ Y+ H + +E + R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 120
Query: 493 RIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
++ A+ Y H I HRD+K+ N+LLD K++DFG S
Sbjct: 121 ----QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDE 171
Query: 553 VQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
G+ Y PE F+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILL---DDKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 161 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 214
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 146
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 146 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 199
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 146
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 147 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 204 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 149
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 150 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 207 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 148
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 149 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 206 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 27/234 (11%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKG---------MLTNGRIVAIKKSKLVDE 427
T+L + + E +N + LG G G V + + + +K + DE
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE 92
Query: 428 SNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTE---- 482
E ++E+ I+S + H N+V LLG C L++ E+ G L ++ ++
Sbjct: 93 K--EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 483 --EFPI---TWEIR--LRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535
F I T R L + +V+ + +L S I HRD+ + N+LL + + AK+ D
Sbjct: 151 DPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGD 207
Query: 536 FGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
FG +R +M D ++ + ++ PE +T +SDV+S+G++L E+ +
Sbjct: 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+K+ + F E+ IL ++ +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 453 GCCLETEVP--LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALCYLHSAA 509
G P LV E++P+G L ++ + RL + + ++ + YL S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDAS---RLLLYSSQICKGMEYLGSRR 131
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT---FGYLDPEYFR 566
+ HRD+ + NIL++ + K++DFG ++ + +D+ R G F Y PE
Sbjct: 132 CV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA-PESLS 187
Query: 567 SSQFTEKSDVYSFGVVLVELLT 588
+ F+ +SDV+SFGVVL EL T
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILL---DDKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 161 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 214
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 123
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 124 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 181 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 147 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 200
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 125 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 180
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 124
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 125 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 162
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 163 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 216
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 217 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 270
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 125
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 126 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 130
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 131 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 152
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 153 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 206
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 207 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 260
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 126
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 127 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 145
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 146 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 11/211 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
++F +ILG+G TV L R AIK K ++ E+ + E ++S+++H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
VKL + E + NG L +YI + F T R A E+ AL YL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETC-TRFYTA-EIVSALEYL 145
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEY 564
H I HRD+K NILL++ +++DFG ++ + + GT Y+ PE
Sbjct: 146 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ SD+++ G ++ +L+ G P R+
Sbjct: 203 LTEKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILL---DDKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 164 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY--- 217
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 218 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 271
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 187 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY--- 240
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 294
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG +R + +
Sbjct: 173 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY--- 226
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 280
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 389 TDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
+DN++ LG+G V + G+ +I+ KK D +E+ E I +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 60
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
+ H N+V+L E LV++ + G L++ I EF + I ++ +++
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQ-QILESI 117
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTFGY 559
Y HS I HR++K N+LL K + K++DFG + + ++ + GT GY
Sbjct: 118 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 172
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
L PE + +++ D+++ GV+L LL G P D
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 210
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 389 TDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
+DN++ LG+G V + G+ +I+ KK D +E+ E I +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 84
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
+ H N+V+L E LV++ + G L++ I EF + I ++ +++
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQ-QILESI 141
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTFGY 559
Y HS I HR++K N+LL K + K++DFG + + ++ + GT GY
Sbjct: 142 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 196
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
L PE + +++ D+++ GV+L LL G P D
Sbjct: 197 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 234
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 389 TDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
+DN++ LG+G V + G+ +I+ KK D +E+ E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
+ H N+V+L E LV++ + G L++ I EF + I ++ +++
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQ-QILESI 118
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTFGY 559
Y HS I HR++K N+LL K + K++DFG + + ++ + GT GY
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 173
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
L PE + +++ D+++ GV+L LL G P D
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 211
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 389 TDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
+DN++ LG+G V + G+ +I+ KK D +E+ E I +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
+ H N+V+L E LV++ + G L++ I EF + I ++ +++
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQ-QILESI 118
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTFGY 559
Y HS I HR++K N+LL K + K++DFG + + ++ + GT GY
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 173
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
L PE + +++ D+++ GV+L LL G P D
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 211
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 387 MATDNFNTNRILGQGGQGTVY----KGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
M +FN +LG+G G V KG + +KK ++ + ++E + E +L+
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 443 INHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
+ L C +T L V E++ G L +I Q F + A E++
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFY--AAEIAIG 454
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L +L S I +RD+K N++LD + K++DFG + + D T GT Y+
Sbjct: 455 LFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIA 510
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE + + D ++FGV+L E+L GQ P D +E
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 20/271 (7%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIK--KSKLV-DESNIEQFINEVAILSQ 442
+ +F+ R++G+G V L RI A+K K +LV D+ +I+ E + Q
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 443 INHRNVVKLLGCCLETEVPLL-VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
++ + L C +TE L V E++ G L ++ Q + + E + E+S A
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLA 122
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLH I +RD+K N+LLD + K++D+G + + T+ GT Y+
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSXFCGTPNYIA 178
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE R + D ++ GV++ E++ G+ P S ++ + E+ LF+V+
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-------DQNTEDYLFQVI 231
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKR 652
+ ++ + + ++L K LN K+R
Sbjct: 232 LEKQIRIPRSLSVKAASVL-KSFLNKDPKER 261
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+K+ + F E+ IL ++ +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G + LV E++P+G L ++ Q + L + ++ + YL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGSRRC 136
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT---FGYLDPEYFRS 567
+ HRD+ + NIL++ + K++DFG ++ + +D+ + R G F Y PE
Sbjct: 137 V---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSD 192
Query: 568 SQFTEKSDVYSFGVVLVELLT 588
+ F+ +SDV+SFGVVL EL T
Sbjct: 193 NIFSRQSDVWSFGVVLYELFT 213
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 23/220 (10%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGRIVA---IKKSKLVDESNIEQFINE 436
SM+ F +LG G V+ K LT G++ A IKKS +S++E NE
Sbjct: 1 SMQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLE---NE 56
Query: 437 VAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
+A+L +I H N+V L T LV + + G L+ D+ E + E + I
Sbjct: 57 IAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELF----DRILERGVYTEKDASLVI 112
Query: 497 -EVSDALCYLHSAASIPIYHRDIKSANILL---DDKYRAKVSDFGASRSVMIDQTHLTTR 552
+V A+ YLH I HRD+K N+L ++ + ++DFG S+ ++Q + +
Sbjct: 113 QQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMST 166
Query: 553 VQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
GT GY+ PE +++ D +S GV+ LL G P
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+K+ + F E+ IL ++ +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G + LV E++P+G L ++ Q + L + ++ + YL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGSRRC 148
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT---FGYLDPEYFRS 567
+ HRD+ + NIL++ + K++DFG ++ + +D+ + R G F Y PE
Sbjct: 149 V---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSD 204
Query: 568 SQFTEKSDVYSFGVVLVELLT 588
+ F+ +SDV+SFGVVL EL T
Sbjct: 205 NIFSRQSDVWSFGVVLYELFT 225
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 22/234 (9%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFIN 435
TS + + N+ + +G+G V + +LT G+ VA+K K++L + S++++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQL-NSSSLQKLFR 62
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYI--HDQTEEFPITWEIRL 492
EV I +NH N+VKL +ETE L LV E+ G ++ Y+ H + +E + R
Sbjct: 63 EVRIXKVLNHPNIVKLFE-VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR- 120
Query: 493 RIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
++ A+ Y H I HRD+K+ N+LLD K++DFG S
Sbjct: 121 ----QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDA 171
Query: 553 VQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
G Y PE F+ ++ + DV+S GV+L L++G P + +E + V
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 20/271 (7%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIK--KSKLV-DESNIEQFINEVAILSQ 442
+ +F+ R++G+G V L RI A+K K +LV D+ +I+ E + Q
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 443 INHRNVVKLLGCCLETEVPLL-VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
++ + L C +TE L V E++ G L ++ Q + + E + E+S A
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLA 133
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLH I +RD+K N+LLD + K++D+G + + T+ GT Y+
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIA 189
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE R + D ++ GV++ E++ G+ P S ++ + E+ LF+V+
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-------DQNTEDYLFQVI 242
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKR 652
+ ++ + + ++L K LN K+R
Sbjct: 243 LEKQIRIPRSMSVKAASVL-KSFLNKDPKER 272
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 398 LGQGGQGTV----YKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL 452
LG+G G+V Y + N G +VA+K+ + F E+ IL ++ +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 453 GCCLET--EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
G + LV E++P+G L ++ Q + L + ++ + YL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGSRRC 135
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT---FGYLDPEYFRS 567
+ HRD+ + NIL++ + K++DFG ++ + +D+ + R G F Y PE
Sbjct: 136 V---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSD 191
Query: 568 SQFTEKSDVYSFGVVLVELLT 588
+ F+ +SDV+SFGVVL EL T
Sbjct: 192 NIFSRQSDVWSFGVVLYELFT 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ ++ + LG G G V+ VA+K K S +E F+ E ++ + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQH 236
Query: 446 RNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIH-DQTEEFPITWEIRLRIAIEVSDALC 503
+VKL T+ P+ ++ EF+ G+L ++ D+ + P+ I + ++++ +
Sbjct: 237 DKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF--SAQIAEGMA 292
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
++ I HRD+++ANIL+ K++DFG +R + + PE
Sbjct: 293 FIEQRNYI---HRDLRAANILVSASLVCKIADFGLAR----------VGAKFPIKWTAPE 339
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLT 588
FT KSDV+SFG++L+E++T
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 177
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 123 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 178
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 216
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 121 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 176
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 214
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 22/256 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTV----YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAI 439
+L M +++ +++G+G G V +K + + K +++ S+ F E I
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
++ N VV+L + +V E++P G L + + + P W R A EV
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKW-ARFYTA-EVV 178
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
AL +HS I HRD+K N+LLD K++DFG + + GT Y
Sbjct: 179 LALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 235
Query: 560 LDPEYFRSS----QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK-E 614
+ PE +S + + D +S GV L E+L G P + SLVG + + M +
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------SLVGTYSKIMNHK 289
Query: 615 NRLFEVLDARVLKEAK 630
N L D + KEAK
Sbjct: 290 NSLTFPDDNDISKEAK 305
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 20/271 (7%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIK--KSKLV-DESNIEQFINEVAILSQ 442
+ +F+ R++G+G V L RI A+K K +LV D+ +I+ E + Q
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 443 INHRNVVKLLGCCLETEVPLL-VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
++ + L C +TE L V E++ G L ++ Q + + E + E+S A
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLA 118
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLH I +RD+K N+LLD + K++D+G + + T+ GT Y+
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSXFCGTPNYIA 174
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE R + D ++ GV++ E++ G+ P S ++ + E+ LF+V+
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-------DQNTEDYLFQVI 227
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKR 652
+ ++ + + ++L K LN K+R
Sbjct: 228 LEKQIRIPRSLSVKAASVL-KSFLNKDPKER 257
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 120 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 175
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 387 MATDNFNTNRILGQGGQGTVY----KGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
M +FN +LG+G G V KG + +KK ++ + ++E + E +L+
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 443 INHRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
+ L C +T L V E++ G L +I Q F + A E++
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFY--AAEIAIG 133
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L +L S I +RD+K N++LD + K++DFG + + D T GT Y+
Sbjct: 134 LFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIA 189
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE + + D ++FGV+L E+L GQ P D +E
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 121 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 176
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 214
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 22/256 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTV----YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAI 439
+L M +++ +++G+G G V +K + + K +++ S+ F E I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
++ N VV+L + +V E++P G L + + + P W R A EV
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKW-ARFYTA-EVV 183
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
AL +HS I HRD+K N+LLD K++DFG + + GT Y
Sbjct: 184 LALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 560 LDPEYFRSS----QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK-E 614
+ PE +S + + D +S GV L E+L G P + SLVG + + M +
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD------SLVGTYSKIMNHK 294
Query: 615 NRLFEVLDARVLKEAK 630
N L D + KEAK
Sbjct: 295 NSLTFPDDNDISKEAK 310
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 177
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 121 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 176
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 214
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 120 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 175
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 392 FNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQF---INEVAILSQINHRN 447
F+ R +G G G VY + N +VAIKK + + E++ I EV L ++ H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 448 VVKLLGCCLETEVPLLVYEF-IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS-DALCYL 505
++ GC L LV E+ + + + +H + P+ E+ + + L YL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK----PLQ-EVEIAAVTHGALQGLAYL 170
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYF 565
HS I HRD+K+ NILL + K+ DFG S S+M GT ++ PE
Sbjct: 171 HSHNMI---HRDVKAGNILLSEPGLVKLGDFG-SASIMAPANXFV----GTPYWMAPEVI 222
Query: 566 RS---SQFTEKSDVYSFGVVLVELLTGQKPI 593
+ Q+ K DV+S G+ +EL + P+
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 174
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 174
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 174
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 174
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 122 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 177
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 122 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 22/256 (8%)
Query: 384 ELEMATDNFNTNRILGQGGQGTV----YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAI 439
+L M +++ +++G+G G V +K + + K +++ S+ F E I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
++ N VV+L + +V E++P G L + + + P W R A EV
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY--DVPEKW-ARFYTA-EVV 183
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
AL +HS I HRD+K N+LLD K++DFG + + GT Y
Sbjct: 184 LALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 560 LDPEYFRSS----QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK-E 614
+ PE +S + + D +S GV L E+L G P + SLVG + + M +
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA------DSLVGTYSKIMNHK 294
Query: 615 NRLFEVLDARVLKEAK 630
N L D + KEAK
Sbjct: 295 NSLTFPDDNDISKEAK 310
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 16/218 (7%)
Query: 389 TDNFNTNRILGQGGQGTVY--KGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
++ + + LG G G V + +T+ R + I + V S+ + + EVA+L ++H
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
N++KL + LV E G L+ I + + + + ++ +V + YL
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK---QVLSGVTYL 152
Query: 506 HSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
H I HRD+K N+LL+ K + K+ DFG S +V +Q + R+ GT Y+ P
Sbjct: 153 HKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS-AVFENQKKMKERL-GTAYYIAP 207
Query: 563 EYFRSSQFTEKSDVYSFGVVLVELLTGQKPI-RSTDSE 599
E R ++ EK DV+S GV+L LL G P TD E
Sbjct: 208 EVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 175
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 25/234 (10%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKK-SKLVDESNIEQFINEVA 438
E+ N R LG G G VY+G ++ + VA+K ++ E + F+ E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 439 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD----QTEEFPITWEIRLRI 494
I+S+ NH+N+V+ +G L++ ++ E + G L ++ + ++ + L +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSVMIDQTHLTT 551
A +++ YL I HRDI + N LL AK+ DFG ++ + +
Sbjct: 147 ARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY--- 200
Query: 552 RVQG----TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
R G ++ PE F FT K+D +SFGV+L E+ + G P S ++E
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 396 RILGQGGQGTVYKGM-LTNGRIVAIKK--SKLVDESNIEQF---INEVAILSQINHRNVV 449
++LG G GTV+KG+ + G + I + D+S + F + + + ++H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+LLG C + + LV +++P G+L ++ + + ++ L ++++ + YL
Sbjct: 97 RLLGLCPGSSL-QLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT-TRVQGTFGYLDPEYFRSS 568
+ HR++ + N+LL + +V+DFG + + D L + + ++ E
Sbjct: 154 MV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 210
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627
++T +SDV+S+GV + EL+T G +P RL EV D
Sbjct: 211 KYTHQSDVWSYGVTVWELMTFGAEPYAGL-------------------RLAEVPDLLEKG 251
Query: 628 EAKEEE---IITVAMLAKRCLNMIGKKRPTMKEAAFE 661
E + I V M+ +C + RPT KE A E
Sbjct: 252 ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 288
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L +++ D + I + ++ L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 120 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 175
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 213
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 175
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 125/271 (46%), Gaps = 20/271 (7%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTN-GRIVA---IKKSKLVDESNIEQFINEVAILSQ 442
+ +F+ R++G+G V L RI A +KK + D+ +I+ E + Q
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 443 INHRNVVKLLGCCLETEVPLL-VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
++ + L C +TE L V E++ G L ++ Q + + E + E+S A
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLA 165
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLH I +RD+K N+LLD + K++D+G + + T+ GT Y+
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSTFCGTPNYIA 221
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE R + D ++ GV++ E++ G+ P S ++ + E+ LF+V+
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-------DQNTEDYLFQVI 274
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKR 652
+ ++ + + ++L K LN K+R
Sbjct: 275 LEKQIRIPRSLSVKAASVL-KSFLNKDPKER 304
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 36/277 (12%)
Query: 396 RILGQGGQGTVYKGM-LTNGRIVAIKKSKLV--DESNIEQF---INEVAILSQINHRNVV 449
++LG G GTV+KG+ + G + I V D+S + F + + + ++H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+LLG C + + L V +++P G+L ++ + ++ L ++++ + YL
Sbjct: 79 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT-TRVQGTFGYLDPEYFRSS 568
+ HR++ + N+LL + +V+DFG + + D L + + ++ E
Sbjct: 136 MV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 192
Query: 569 QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627
++T +SDV+S+GV + EL+T G +P RL EV D
Sbjct: 193 KYTHQSDVWSYGVTVWELMTFGAEPYAGL-------------------RLAEVPDLLEKG 233
Query: 628 EAKEEE---IITVAMLAKRCLNMIGKKRPTMKEAAFE 661
E + I V M+ +C + RPT KE A E
Sbjct: 234 ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 19/223 (8%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA----IEVSD 500
H N+VKLL LV+EF L+Q + D + +T I L + ++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALT-GIPLPLIKSYLFQLLQ 114
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
L + HS + HRD+K N+L++ + K++DFG +R+ + V T Y
Sbjct: 115 GLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYR 170
Query: 561 DPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
PE ++ + D++S G + E++T ++ + DSE D+
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+ K +L E+ I E+++L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 212
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+ K +L E+ I E+++L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+EF+ + L +++ D + I + ++ L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 21/227 (9%)
Query: 397 ILGQGGQGTVYKGM-LTNGRIVAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKLLGC 454
ILGQG V++G G + AIK + + ++ + E +L ++NH+N+VKL
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 455 CLETEV--PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIP 512
ET +L+ EF P G+LY + + + + + L + +V + +L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 513 IYHRDIKSANILL----DDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS 568
I HR+IK NI+ D + K++DFGA+R + D+ + + GT YL P+ + +
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMYERA 190
Query: 569 --------QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY 607
++ D++S GV TG P R + V Y
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 392 FNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQF---INEVAILSQINHRN 447
F+ R +G G G VY + N +VAIKK + + E++ I EV L ++ H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 448 VVKLLGCCLETEVPLLVYEF-IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL---C 503
++ GC L LV E+ + + + +H + P+ + IA AL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK----PLQ---EVEIAAVTHGALQGLA 129
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS I HRD+K+ NILL + K+ DFG S S+M GT ++ PE
Sbjct: 130 YLHSHNMI---HRDVKAGNILLSEPGLVKLGDFG-SASIMAPANXFV----GTPYWMAPE 181
Query: 564 YFRS---SQFTEKSDVYSFGVVLVELLTGQKPI 593
+ Q+ K DV+S G+ +EL + P+
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L ++ D + I + ++ L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 177
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGR--IVAIKKSKLVDESNIEQFI 434
+F + +D + R+LG+G G V K +T + I K ++ +++ E +
Sbjct: 38 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 435 NEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI 494
EV +L Q++H N++KL + LV E G L+ I + + RI
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARI 154
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTT 551
+V + Y+H I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 155 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEA 204
Query: 552 RVQ-----GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 205 SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 21/227 (9%)
Query: 397 ILGQGGQGTVYKGM-LTNGRIVAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKLLGC 454
ILGQG V++G G + AIK + + ++ + E +L ++NH+N+VKL
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 455 CLETEV--PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIP 512
ET +L+ EF P G+LY + + + + + L + +V + +L
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 513 IYHRDIKSANILL----DDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS 568
I HR+IK NI+ D + K++DFGA+R + D+ ++ + GT YL P+ + +
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYERA 190
Query: 569 --------QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY 607
++ D++S GV TG P R + V Y
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGR--IVAIKKSKLVDESNIEQFI 434
+F + +D + R+LG+G G V K +T + I K ++ +++ E +
Sbjct: 39 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 435 NEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI 494
EV +L Q++H N++KL + LV E G L+ I + + RI
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARI 155
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTT 551
+V + Y+H I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 156 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEA 205
Query: 552 RVQ-----GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 206 SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGR--IVAIKKSKLVDESNIEQFI 434
+F + +D + R+LG+G G V K +T + I K ++ +++ E +
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 435 NEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI 494
EV +L Q++H N++KL + LV E G L+ I + + RI
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARI 137
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTT 551
+V + Y+H I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 138 IRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEA 187
Query: 552 RVQ-----GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 188 SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L ++ D + I + ++ L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 177
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 415 RIVAIK-KSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473
++VAIK +K E NE+A+L +I H N+V L L+ + + G L
Sbjct: 44 KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANIL---LDDKYR 530
+ I E+ T R+ +V DA+ YLH + I HRD+K N+L LD+ +
Sbjct: 104 FDRI---VEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSK 157
Query: 531 AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQ 590
+SDFG S+ M D + + GT GY+ PE +++ D +S GV+ LL G
Sbjct: 158 IMISDFGLSK--MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 591 KPIRSTDSEEDKSLVGYFLEAMKE 614
P E D L L+A E
Sbjct: 216 PPFY---DENDAKLFEQILKAEYE 236
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+EF+ + L ++ D + I + ++ L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 121 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 176
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 379 LFTSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGR--IVAIKKSKLVDESNIEQFI 434
+F + +D + R+LG+G G V K +T + I K ++ +++ E +
Sbjct: 15 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 435 NEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI 494
EV +L Q++H N++KL + LV E G L+ I + + RI
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARI 131
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTT 551
+V + Y+H I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 132 IRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEA 181
Query: 552 RVQ-----GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 182 SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 397 ILGQGGQGTVYKGMLTNGRI---VAIKKSK-LVDESNIEQFINEVAILSQINHR-NVVKL 451
++G+G G V K + + AIK+ K + + F E+ +L ++ H N++ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQT--EEFP-----------ITWEIRLRIAIEV 498
LG C L E+ P+G L ++ E P ++ + L A +V
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR--SVMIDQTHLTTRVQGT 556
+ + YL I HRD+ + NIL+ + Y AK++DFG SR V + +T V+
Sbjct: 152 ARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR-- 206
Query: 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
++ E S +T SDV+S+GV+L E+++
Sbjct: 207 --WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 397 ILGQGGQGTVYKGMLTNGRI---VAIKKSK-LVDESNIEQFINEVAILSQINHR-NVVKL 451
++G+G G V K + + AIK+ K + + F E+ +L ++ H N++ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQT--EEFP-----------ITWEIRLRIAIEV 498
LG C L E+ P+G L ++ E P ++ + L A +V
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR--SVMIDQTHLTTRVQGT 556
+ + YL I HRD+ + NIL+ + Y AK++DFG SR V + +T V+
Sbjct: 142 ARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR-- 196
Query: 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
++ E S +T SDV+S+GV+L E+++
Sbjct: 197 --WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 154
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 211
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 260
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 261 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 310
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 109
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 166
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 215
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 265
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 80
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 137
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 186
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 236
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 113
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 170
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 219
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 220 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 269
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 103
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 160
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 209
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 259
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 111
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 168
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 217
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 218 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 267
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 109
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 166
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 221
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 265
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 106/217 (48%), Gaps = 11/217 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQINHR 446
+NF +G+G G VYK G +VA+KK +L E+ I E+++L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
N+VKLL LV+E + + L ++ D + I + ++ L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
S + HRD+K N+L++ + K++DFG +R+ + T V T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 567 SSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 211
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK-KSKLVDESNIEQFINEVAILSQINHRN 447
D ++ +LG G V ++VAIK +K E NE+A+L +I H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
+V L L+ + + G L+ I E+ T R+ +V DA+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 508 AASIPIYHRDIKSANIL---LDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+ I HRD+K N+L LD+ + +SDFG S+ M D + + GT GY+ PE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEV 189
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE 614
+++ D +S GV+ LL G P E D L L+A E
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFY---DENDAKLFEQILKAEYE 236
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK-KSKLVDESNIEQFINEVAILSQINHRN 447
D ++ +LG G V ++VAIK +K E NE+A+L +I H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
+V L L+ + + G L+ I E+ T R+ +V DA+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 508 AASIPIYHRDIKSANIL---LDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+ I HRD+K N+L LD+ + +SDFG S+ M D + + GT GY+ PE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEV 189
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE 614
+++ D +S GV+ LL G P E D L L+A E
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFY---DENDAKLFEQILKAEYE 236
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 88
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 145
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 194
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 195 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 244
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK-KSKLVDESNIEQFINEVAILSQINHRN 447
D ++ +LG G V ++VAIK +K E NE+A+L +I H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS 507
+V L L+ + + G L+ I E+ T R+ +V DA+ YLH
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVKYLHD 134
Query: 508 AASIPIYHRDIKSANIL---LDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+ I HRD+K N+L LD+ + +SDFG S+ M D + + GT GY+ PE
Sbjct: 135 ---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEV 189
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE 614
+++ D +S GV+ LL G P E D L L+A E
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFY---DENDAKLFEQILKAEYE 236
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 28/234 (11%)
Query: 392 FNTNRILGQGG-QGTVYKGMLTNGRIVAIK----KSKLVDESNIEQFINEVAILSQINHR 446
F LG G V G++ A+K K+ ES+IE NE+A+L +I H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE---NEIAVLRKIKHE 80
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVSDALC 503
N+V L LV + + G L+ I ++ TE+ T + +V DA+
Sbjct: 81 NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST------LIRQVLDAVY 134
Query: 504 YLHSAASIPIYHRDIKSANILL---DDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
YLH + I HRD+K N+L D++ + +SDFG S+ M + + + GT GY+
Sbjct: 135 YLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK--MEGKGDVMSTACGTPGYV 189
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE 614
PE +++ D +S GV+ LL G P E D L L+A E
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY---DENDSKLFEQILKAEYE 240
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 79
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 136
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 191
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 235
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 75
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 181
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 231
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 87
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 144
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 243
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 20/237 (8%)
Query: 376 KTKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFIN 435
+T +F E ++ + ++G+G G VY G + + + +E ++ F
Sbjct: 20 QTSIFLQ-EWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKR 78
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
EV Q H NVV +G C+ ++ TLY + D + + R +IA
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVN-KTR-QIA 136
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG---ASRSVMIDQTHLTTR 552
E+ + YLH+ I H+D+KS N+ D+ + ++DFG S + + R
Sbjct: 137 QEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLR 192
Query: 553 VQ-GTFGYLDPEYFRSSQ---------FTEKSDVYSFGVVLVELLTGQKPIRSTDSE 599
+Q G +L PE R F++ SDV++ G + EL + P ++ +E
Sbjct: 193 IQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE 249
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 94
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 151
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 206
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 250
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 87
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 144
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 199
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 243
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 83
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 140
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 195
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 76
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 133
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 188
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 232
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ +NF +G+G G VYK G +VA+KK +L E+ I E+++L ++N
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
H N+VKLL LV+E + + L +++ D + I + ++ L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS + HRD+K N+L++ + K++DFG +R+ + V T Y PE
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 177
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDK 602
++ + D++S G + E++T ++ + DSE D+
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQ 215
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 75
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 231
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 122/225 (54%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 75
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 231
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGC 454
LG G G VYK N + +K++D E +E ++ E+ IL+ +H N+VKLL
Sbjct: 45 LGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS-DALCYLHSAASIPI 513
++ EF G + + + E P+T E ++++ + + DAL YLH I
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLEL--ERPLT-ESQIQVVCKQTLDALNYLHDNK---I 156
Query: 514 YHRDIKSANILLDDKYRAKVSDFGAS----RSVMIDQTHLTTRVQGTFGYLDPEYF---- 565
HRD+K+ NIL K++DFG S R++ + + GT ++ PE
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCET 211
Query: 566 -RSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ + K+DV+S G+ L+E+ + P
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 431 EQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWE 489
E + EV IL +++ H N+++L LV++ + G L+ Y+ TE+ ++ +
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK 111
Query: 490 IRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549
+I + + +C LH + I HRD+K NILLDD K++DFG S +D
Sbjct: 112 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEK 166
Query: 550 TTRVQGTFGYLDPEYFRSSQ------FTEKSDVYSFGVVLVELLTGQKP 592
V GT YL PE S + ++ D++S GV++ LL G P
Sbjct: 167 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 431 EQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWE 489
E + EV IL +++ H N+++L LV++ + G L+ Y+ TE+ ++ +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK 124
Query: 490 IRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549
+I + + +C LH + I HRD+K NILLDD K++DFG S +D
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEK 179
Query: 550 TTRVQGTFGYLDPEYFRSSQ------FTEKSDVYSFGVVLVELLTGQKP 592
V GT YL PE S + ++ D++S GV++ LL G P
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGC 454
LG G G VYK N + +K++D E +E ++ E+ IL+ +H N+VKLL
Sbjct: 45 LGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS-DALCYLHSAASIPI 513
++ EF G + + + E P+T E ++++ + + DAL YLH I
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLEL--ERPLT-ESQIQVVCKQTLDALNYLHDNK---I 156
Query: 514 YHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ---GTFGYLDPEYF----- 565
HRD+K+ NIL K++DFG S T R GT ++ PE
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAK----NTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ + K+DV+S G+ L+E+ + P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 431 EQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWE 489
E + EV IL +++ H N+++L LV++ + G L+ Y+ TE+ ++ +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK 124
Query: 490 IRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549
+I + + +C LH + I HRD+K NILLDD K++DFG S +D
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEK 179
Query: 550 TTRVQGTFGYLDPEYFRSSQ------FTEKSDVYSFGVVLVELLTGQKP 592
V GT YL PE S + ++ D++S GV++ LL G P
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + +G G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + KV+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 398 LGQGGQGTVYKGML------TNGRIVAIKKSKLVDESNI-EQFINEVAILSQINHRNVVK 450
LG+ G VYKG L + VAIK K E + E+F +E + +++ H NVV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYI-------------HDQTEEFPITWEIRLRIAIE 497
LLG + + +++ + +G L++++ D+T + + + + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV-MIDQTHLTTRVQGT 556
++ + YL S + H+D+ + N+L+ DK K+SD G R V D L
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
++ PE +F+ SD++S+GVVL E+ + G +P
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 25/217 (11%)
Query: 398 LGQGGQGTVYKGML------TNGRIVAIKKSKLVDESNI-EQFINEVAILSQINHRNVVK 450
LG+ G VYKG L + VAIK K E + E+F +E + +++ H NVV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQYI-------------HDQTEEFPITWEIRLRIAIE 497
LLG + + +++ + +G L++++ D+T + + + + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV-MIDQTHLTTRVQGT 556
++ + YL S + H+D+ + N+L+ DK K+SD G R V D L
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKP 592
++ PE +F+ SD++S+GVVL E+ + G +P
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGC 454
LG G G VYK N + +K++D E +E ++ E+ IL+ +H N+VKLL
Sbjct: 45 LGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS-DALCYLHSAASIPI 513
++ EF G + + + E P+T E ++++ + + DAL YLH I
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLEL--ERPLT-ESQIQVVCKQTLDALNYLHDNK---I 156
Query: 514 YHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ---GTFGYLDPEYF----- 565
HRD+K+ NIL K++DFG S T R GT ++ PE
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAK----NTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ + K+DV+S G+ L+E+ + P
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 23/230 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN-GRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
D+F R +G+G G V + ++ A+K K K V+ + + E+ I+ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTL----YQYIHDQTEEFPITWEIRLRIAIEVSDA 501
+V L + E +V + + G L Q +H + E ++L I E+ A
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEET------VKLFIC-ELVMA 127
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YL + I HRD+K NILLD+ ++DF + +++ +T +TT + GT Y+
Sbjct: 128 LDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIA-AMLPRETQITT-MAGTKPYMA 182
Query: 562 PEYFRSSQ---FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF 608
PE F S + ++ D +S GV ELL G++P S K +V F
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 397 ILGQGGQGTVYKGMLTNGRI---VAIKKSK-LVDESNIEQFINEVAILSQINHR-NVVKL 451
++G+G G V K + + AIK+ K + + F E+ +L ++ H N++ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQT--EEFP-----------ITWEIRLRIAIEV 498
LG C L E+ P+G L ++ E P ++ + L A +V
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR--SVMIDQTHLTTRVQGT 556
+ + YL I HR++ + NIL+ + Y AK++DFG SR V + +T V+
Sbjct: 149 ARGMDYLSQKQFI---HRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR-- 203
Query: 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588
++ E S +T SDV+S+GV+L E+++
Sbjct: 204 --WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 389 TDNFNTNRILGQGGQGTVYK--GMLTNG----RIVAIKKSKLVDESNIEQFINEVAILSQ 442
+ +N +LG+G G V K +T +++ +K D S I + EV +L +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI---LREVELLKK 77
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
++H N++KL ++ +V E G L+ I + + RI +V +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGI 134
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
Y+H I HRD+K NILL+ K + K+ DFG S + T + R+ GT Y
Sbjct: 135 TYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI-GTAYY 189
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ PE R + + EK DV+S GV+L LL+G P
Sbjct: 190 IAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 392 FNTNRILGQGGQGTVYKGM----LTNGRIVA---IKKSKLV-DESNIEQFINEVAILSQI 443
F R+LG+GG G V++ G+I A +KK+ +V + + E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H +V L+ L+ E++ G L+ + + T L E+S AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL---AEISMALG 135
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LH I +RD+K NI+L+ + K++DFG + + D T +T GT Y+ PE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPE 191
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
S D +S G ++ ++LTG P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 398 LGQGGQGTVYKG--MLTNGRIVAIKKSKLV--DESNIEQFINEVAILSQIN---HRNVVK 450
+G+G G V+K + GR VA+K+ ++ +E I EVA+L + H NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 451 LLGCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
L C ET++ LV+E + + L Y+ D+ E + E + ++ L +
Sbjct: 79 LFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHS + HRD+K NIL+ + K++DFG +R + Q LT+ V T Y PE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTS-VVVTLWYRAPEV 190
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
S + D++S G + E+ +KP+ S+ D+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 44/272 (16%)
Query: 398 LGQGGQGTVYKGML-TNGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGC 454
+G G G V+K G ++A+K+ + E N ++ +L + +V+ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514
+ + E + GT + + + + PI I ++ + + AL YL +
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQG-PIPERILGKMTVAIVKALYYLKEKHGV--I 147
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTE-- 572
HRD+K +NILLD++ + K+ DFG S ++ D+ R G Y+ PE T+
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK--DRSAGCAAYMAPERIDPPDPTKPD 205
Query: 573 ---KSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEA 629
++DV+S G+ LVEL TGQ P ++ ++ FEVL +VL+E
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTD------------------FEVL-TKVLQE- 245
Query: 630 KEEEIITVAM--------LAKRCLNMIGKKRP 653
E ++ M K CL +KRP
Sbjct: 246 -EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRP 276
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 119/225 (52%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK + F N E+ I+ +++H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKLDHCNI 75
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 231
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 389 TDNFNTNRILGQGGQGTVYK--GMLTNG----RIVAIKKSKLVDESNIEQFINEVAILSQ 442
+ +N +LG+G G V K +T +++ +K D S I + EV +L +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI---LREVELLKK 77
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
++H N++KL ++ +V E G L+ I + + RI +V +
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGI 134
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
Y+H I HRD+K NILL+ K + K+ DFG S + T + R+ GT Y
Sbjct: 135 TYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI-GTAYY 189
Query: 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ PE R + + EK DV+S GV+L LL+G P
Sbjct: 190 IAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 156
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPE 209
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 390 DNFNTNRILGQGGQGTVYK--GMLTNG----RIVAIKKSKLVDESNIEQFINEVAILSQI 443
+ +N +LG+G G V K +T +++ +K D S I + EV +L ++
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTI---LREVELLKKL 78
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
+H N++KL ++ +V E G L+ I + + RI +V +
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGIT 135
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
Y+H I HRD+K NILL+ K + K+ DFG S + T + R+ GT Y+
Sbjct: 136 YMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRI-GTAYYI 190
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
PE R + + EK DV+S GV+L LL+G P
Sbjct: 191 APEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 382 SMELEMATDNFNTNRI------LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFI 434
S E E + + N + LG G G VYK G + A K + E +E +I
Sbjct: 5 SREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYI 64
Query: 435 NEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI 494
E+ IL+ +H +VKLLG ++ EF P G + + + E ++++
Sbjct: 65 VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQV 121
Query: 495 AI-EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553
++ +AL +LHS I HRD+K+ N+L+ + +++DFG S + + +
Sbjct: 122 VCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI 178
Query: 554 QGTFGYLDPEY-----FRSSQFTEKSDVYSFGVVLVELLTGQKP 592
GT ++ PE + + + K+D++S G+ L+E+ + P
Sbjct: 179 -GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 156
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLAPE 209
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + +G G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + KV+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + +G G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + KV+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 392 FNTNRILGQGGQGTVYKGM----LTNGRIVA---IKKSKLV-DESNIEQFINEVAILSQI 443
F R+LG+GG G V++ G+I A +KK+ +V + + E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H +V L+ L+ E++ G L+ + + T L E+S AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL---AEISMALG 135
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LH I +RD+K NI+L+ + K++DFG + + D T +T GT Y+ PE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPE 191
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
S D +S G ++ ++LTG P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFX---EPHARFYAAQIVLTFE 156
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPE 209
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFX---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK + F N E+ I+ +++H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKLDHCNI 75
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 181
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFX---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 120/225 (53%), Gaps = 27/225 (12%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK L D+ +F N E+ I+ +++H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK----RFKNRELQIMRKLDHCNI 75
Query: 449 VKLL------GCCLETEVPLLVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L G + LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ + +++
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 559 YLDPEY-FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y PE F ++ +T DV+S G VL ELL GQ PI DS D+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 231
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 39/231 (16%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNV 448
++ +++G G G VY+ L + G +VAIKK + F N E+ I+ +++H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKLDHCNI 75
Query: 449 VKLLGCCLET-----EVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVS 499
V+L + EV L LV +++P T+Y+ + + P+ + ++L + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIY-VKLYM-YQLF 132
Query: 500 DALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+L Y+HS I HRDIK N+LLD D K+ DFG+++ ++ R +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--------RGEPNVS 181
Query: 559 YLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Y+ Y+R+ + +T DV+S G VL ELL GQ PI DS D+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQ 231
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 398 LGQGGQGTVYKG--MLTNGRIVAIKKSKLV--DESNIEQFINEVAILSQIN---HRNVVK 450
+G+G G V+K + GR VA+K+ ++ +E I EVA+L + H NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 451 LLGCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
L C ET++ LV+E + + L Y+ D+ E + E + ++ L +
Sbjct: 79 LFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHS + HRD+K NIL+ + K++DFG +R + Q LT+ V T Y PE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTS-VVVTLWYRAPEV 190
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
S + D++S G + E+ +KP+ S+ D+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 141
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEYLAPE 194
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 398 LGQGGQGTVYKG--MLTNGRIVAIKKSKLV--DESNIEQFINEVAILSQIN---HRNVVK 450
+G+G G V+K + GR VA+K+ ++ +E I EVA+L + H NVV+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 451 LLGCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
L C ET++ LV+E + + L Y+ D+ E + E + ++ L +
Sbjct: 79 LFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHS + HRD+K NIL+ + K++DFG +R + Q LT+ V T Y PE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTS-VVVTLWYRAPEV 190
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
S + D++S G + E+ +KP+ S+ D+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 21/216 (9%)
Query: 392 FNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNV 448
F ++G G G VYKG + G++ AIK + +E I+Q IN + S +HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS--HHRNI 83
Query: 449 VKLLGCCLETEVP------LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
G ++ P LV EF G++ I + T+ + E I E+ L
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGL 142
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562
+LH I HRDIK N+LL + K+ DFG S + T + GT ++ P
Sbjct: 143 SHLHQHKVI---HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAP 198
Query: 563 EYFR-----SSQFTEKSDVYSFGVVLVELLTGQKPI 593
E + + KSD++S G+ +E+ G P+
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 100/225 (44%), Gaps = 26/225 (11%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVY--KGMLTNGR--IVAIKKSKLVDESNIEQFIN 435
F + +D + R+LG+G G V K +T + I K ++ +++ E +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
EV +L Q++H N+ KL + LV E G L+ I + + RI
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVD---AARII 132
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTR 552
+V + Y H I HRD+K N+LL+ K + ++ DFG S TH
Sbjct: 133 RQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEAS 182
Query: 553 VQ-----GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 183 KKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL 456
LG G G VYK G + A K + E +E +I E+ IL+ +H +VKLLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 457 ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI-EVSDALCYLHSAASIPIYH 515
++ EF P G + + + E ++++ ++ +AL +LHS I H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSKR---IIH 132
Query: 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY-----FRSSQF 570
RD+K+ N+L+ + +++DFG S + + + GT ++ PE + + +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPY 191
Query: 571 TEKSDVYSFGVVLVELLTGQKP 592
K+D++S G+ L+E+ + P
Sbjct: 192 DYKADIWSLGITLIEMAQIEPP 213
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTNGR-IVAIKKSKLVD-ESNIEQFINEVAILSQINHRN 447
D++ ++G G V + VAIK+ L ++++++ + E+ +SQ +H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQT----------EEFPITWEIRLRIAIE 497
+V + + LV + + G++ I +E I +R E
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR-----E 124
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF 557
V + L YLH I HRD+K+ NILL + +++DFG S + +V+ TF
Sbjct: 125 VLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 558 G----YLDPEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKP 592
++ PE + + K+D++SFG+ +EL TG P
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTNGR-IVAIKKSKLVD-ESNIEQFINEVAILSQINHRN 447
D++ ++G G V + VAIK+ L ++++++ + E+ +SQ +H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD-----QTEEFPITWEIRLRIAIEVSDAL 502
+V + + LV + + G++ I + + + I EV + L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG---- 558
YLH I HRD+K+ NILL + +++DFG S + +V+ TF
Sbjct: 135 EYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 559 YLDPEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKP 592
++ PE + + K+D++SFG+ +EL TG P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+++D + KV+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 398 LGQGGQGTVYKGMLT----NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKL 451
L + G+G+ K +L +GR IK+ + + E+ EVA+L+ + H N+V+
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQT-----EEFPITWEIRLRIAIEVSDALCYLH 506
E +V ++ G L++ I+ Q E+ + W +++ AL ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVH 142
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
I HRDIKS NI L ++ DFG +R V+ L GT YL PE
Sbjct: 143 DRK---ILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNSTVELARACIGTPYYLSPEICE 198
Query: 567 SSQFTEKSDVYSFGVVLVELLT 588
+ + KSD+++ G VL EL T
Sbjct: 199 NKPYNNKSDIWALGCVLYELCT 220
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+++D + KV+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 137/307 (44%), Gaps = 56/307 (18%)
Query: 391 NFNTNRILGQGGQGTVYKG-MLTNGRIVAIK---KSKLVDESNIEQFIN---EVAILSQI 443
+ +LG+GG GTV+ G LT+ VAIK +++++ S + + EVA+L ++
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 444 N----HRNVVKLLGCCLETEVPLLVYEF-IPNGTLYQYIHDQTEEFPITWEIRLRIAIEV 498
H V++LL E +LV E +P L+ YI TE+ P+ +V
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI---TEKGPLGEGPSRCFFGQV 148
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYR-AKVSDFGASRSVMIDQTHLTTRVQGTF 557
A+ + HS + HRDIK NIL+D + AK+ DFG S +++ D+ + T GT
Sbjct: 149 VAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPY--TDFDGTR 202
Query: 558 GYLDPEYFRSSQFTE-KSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENR 616
Y PE+ Q+ + V+S G++L +++ G P E D+
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF-----ERDQ-------------- 243
Query: 617 LFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQH 676
E+L+A + A L +RCL RP+++E D MQ
Sbjct: 244 --EILEAELHFPAHVSP--DCCALIRRCLAPKPSSRPSLEEILL----------DPWMQT 289
Query: 677 NCDDIDF 683
+D+
Sbjct: 290 PAEDVPL 296
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 396 RILGQGGQ-GTVYKGMLTNGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKL 451
I+G+ G G VYK N + +K++D E +E ++ E+ IL+ +H N+VKL
Sbjct: 15 EIIGELGDFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 72
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS-DALCYLHSAAS 510
L ++ EF G + + + E P+T E ++++ + + DAL YLH
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLEL--ERPLT-ESQIQVVCKQTLDALNYLHDNK- 128
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYF----- 565
I HRD+K+ NIL K++DFG S GT ++ PE
Sbjct: 129 --IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ + K+DV+S G+ L+E+ + P
Sbjct: 187 KDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F + LG G G V ML G A+K K K+V IE +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F + LG G G V ML G A+K K K+V IE +NE IL
Sbjct: 62 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 174
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 227
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F + LG G G V ML G A+K K K+V IE +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F + LG G G V ML G A+K K K+V IE +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFX---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+++D + KV+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F + LG G G V ML G A+K K K+V IE +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRV---MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F + LG G G V ML G A+K K K+V IE +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F + LG G G V ML G A+K K K+V IE +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++P G ++ ++ + F E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 390 DNFNTNRILGQGGQGTV----YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
D F + LG G G V +K + + + K K+V IE +NE IL +N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALCY 504
+VKL + +V E++P G ++ ++ + F E R A ++ Y
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFEY 149
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 150 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 202
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 139
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 140 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 195
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 196 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 248
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+G ++F RV E + L + CL + RPT +E
Sbjct: 249 IG--------GQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 283
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 140
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 141 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 196
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 197 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 249
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+G ++F RV E + L + CL + RPT +E
Sbjct: 250 IG--------GQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 284
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 390 DNFNTNRILGQGGQGTV----YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
D F + LG G G V +K + + + K K+V IE +NE IL +N
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALCY 504
+VKL + +V E++P G ++ ++ + F E R A ++ Y
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFX---EPHARFYAAQIVLTFEY 149
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 150 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEI 202
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 140
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 141 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 196
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 197 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 249
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+G ++F RV E + L + CL + RPT +E
Sbjct: 250 IG--------GQVF--FRQRVSXECQH--------LIRWCLALRPSDRPTFEE 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 140
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 141 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 196
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 197 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 249
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+G ++F RV E + L + CL + RPT +E
Sbjct: 250 IG--------GQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 284
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 43/306 (14%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYK----GMLTNGRIVAIKKSKLVDESNI-- 430
T+L + E + + + LG G G V + G++ + + + L +++
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 69
Query: 431 -EQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
E ++E+ +LS + NH N+V LLG C L++ E+ G L ++ + + F
Sbjct: 70 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 129
Query: 485 -----------PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKV 533
+ E L + +V+ + +L S I HRD+ + NILL K+
Sbjct: 130 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKI 186
Query: 534 SDFGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQK 591
DFG +R + D ++ + ++ PE + +T +SDV+S+G+ L EL + G
Sbjct: 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246
Query: 592 PIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKK 651
P + F + +KE F +L + E + + K C + K
Sbjct: 247 PYPGMPVDSK------FYKMIKEG--FRML-------SPEHAPAEMYDIMKTCWDADPLK 291
Query: 652 RPTMKE 657
RPT K+
Sbjct: 292 RPTFKQ 297
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 139
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 140 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 195
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 196 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 248
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+G ++F RV E + L + CL + RPT +E
Sbjct: 249 IG--------GQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 283
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 139
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 140 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 195
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 196 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 248
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+G ++F RV E + L + CL + RPT +E
Sbjct: 249 IG--------GQVF--FRQRVSXECQH--------LIRWCLALRPSDRPTFEE 283
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 24 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 140
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 141 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 196
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 197 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 249
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+G ++F RV E + L + CL + RPT +E
Sbjct: 250 IG--------GQVF--FRQRVSXECQH--------LIRWCLALRPSDRPTFEE 284
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 31/226 (13%)
Query: 393 NTNRILGQGGQGTVYKGML--TNGRIVAIKK-----------------SKLVDESNIEQF 433
N RI+ QG K +L + + A+KK K+ +S + F
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 434 INEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL-----YQYIHDQTEEFPITW 488
NE+ I++ I + + G + ++YE++ N ++ Y ++ D+ I
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 489 EIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548
++ I V ++ Y+H+ +I HRD+K +NIL+D R K+SDFG S M+D+
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLSDFGES-EYMVDKKI 207
Query: 549 LTTRVQGTFGYLDPEYF--RSSQFTEKSDVYSFGVVLVELLTGQKP 592
+R GT+ ++ PE+F SS K D++S G+ L + P
Sbjct: 208 KGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
TD + +G+G V + G +I+ KK D +E+ E I
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSD 500
+ H N+V+L E LV++ + G L++ I + E + I+ ++ +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-----QILE 114
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTF 557
A+ + H + + HRD+K N+LL K + K++DFG + V DQ GT
Sbjct: 115 AVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG-FAGTP 170
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GYL PE R + + D+++ GV+L LL G P D +
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHK 213
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 435 NEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR 493
E IL Q+ H +++ L+ + LV++ + G L+ Y+ TE+ ++ +
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRS 204
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553
I + +A+ +LH+ I HRD+K NILLDD + ++SDFG S ++ +
Sbjct: 205 IMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGF--SCHLEPGEKLREL 259
Query: 554 QGTFGYLDPEYFRSSQ------FTEKSDVYSFGVVLVELLTGQKPI 593
GT GYL PE + S + ++ D+++ GV+L LL G P
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 39/227 (17%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAI--LSQINHRN 447
DN ++G+G G VYKG L + R VA+K + N FINE I + + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 448 VVKLLGCCLETEVP-----LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
+ + + LLV E+ PNG+L +Y+ T + W R+A V+ L
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGL 124
Query: 503 CYLHSAASIP--------IYHRDIKSANILLDDKYRAKVSDFGASRSVM-------IDQT 547
YLH+ +P I HRD+ S N+L+ + +SDFG S + ++
Sbjct: 125 AYLHT--ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 548 HLTTRVQGTFGYLDPEYFRSS-------QFTEKSDVYSFGVVLVELL 587
+ GT Y+ PE + ++ D+Y+ G++ E+
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F + LG G G V ML G A+K K K+V IE +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+++D + KV+DFG ++ V T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 386 EMATDNFNTNRILGQGGQGTV-YKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILS 441
++ ++F+ ++LG+G G V GR A+K K ++ + + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
H + L + V E+ G L+ ++ + E T E E+ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLHS + +RDIK N++LD K++DFG + + D + T GT YL
Sbjct: 118 LEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLA 173
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE + + D + GVV+ E++ G+ P + D E RLFE++
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------RLFELI 217
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHN 677
++ + T++ AK L + KK P + LGG S +M+H
Sbjct: 218 LMEEIRFPR-----TLSPEAKSLLAGLLKKDPKQR-----LGG-GPSDAKEVMEHR 262
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 127/300 (42%), Gaps = 38/300 (12%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTV-YKGMLTNGRIVAIK---KSKLVDESNIEQFINEV 437
+M+ ++ ++F+ ++LG+G G V GR A+K K ++ + + + E
Sbjct: 2 AMDPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES 61
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIE 497
+L H + L + V E+ G L+ ++ + E T E E
Sbjct: 62 RVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAE 118
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF 557
+ AL YLHS + +RDIK N++LD K++DFG + + D + GT
Sbjct: 119 IVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTP 174
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRL 617
YL PE + + D + GVV+ E++ G+ P + D E RL
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------RL 218
Query: 618 FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHN 677
FE++ ++ + T++ AK L + KK P + LGG S +M+H
Sbjct: 219 FELILMEEIRFPR-----TLSPEAKSLLAGLLKKDPKQR-----LGG-GPSDAKEVMEHR 267
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 392 FNTNRILGQGGQGTVYKG-MLTNGRIVAIKKSKLVDE----SNIEQFINEVAILSQINHR 446
+ + +G GG V + G +VAIK ++D+ S++ + E+ L + H+
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK---IMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVSDALC 503
++ +L +V E+ P G L+ YI Q +EE E R+ + ++ A+
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE-----ETRV-VFRQIVSAVA 122
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
Y+HS HRD+K N+L D+ ++ K+ DFG ++ + G+ Y PE
Sbjct: 123 YVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPE 179
Query: 564 YFRSSQFT-EKSDVYSFGVVLVELLTGQKP 592
+ + ++DV+S G++L L+ G P
Sbjct: 180 LIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+++D + +V+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 43/306 (14%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYK----GMLTNGRIVAIKKSKLVDESNI-- 430
T+L + E + + + LG G G V + G++ + + + L +++
Sbjct: 33 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 92
Query: 431 -EQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
E ++E+ +LS + NH N+V LLG C L++ E+ G L ++ + + F
Sbjct: 93 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 152
Query: 485 -----------PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKV 533
+ E L + +V+ + +L S I HRD+ + NILL K+
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKI 209
Query: 534 SDFGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQK 591
DFG +R + D ++ + ++ PE + +T +SDV+S+G+ L EL + G
Sbjct: 210 CDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 592 PIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKK 651
P + F + +KE F +L + E + + K C + K
Sbjct: 270 PYPGMPVDSK------FYKMIKEG--FRML-------SPEHAPAEMYDIMKTCWDADPLK 314
Query: 652 RPTMKE 657
RPT K+
Sbjct: 315 RPTFKQ 320
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 43/306 (14%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYK----GMLTNGRIVAIKKSKLVDESNI-- 430
T+L + E + + + LG G G V + G++ + + + L +++
Sbjct: 28 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 87
Query: 431 -EQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
E ++E+ +LS + NH N+V LLG C L++ E+ G L ++ + + F
Sbjct: 88 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 147
Query: 485 -----------PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKV 533
+ E L + +V+ + +L S I HRD+ + NILL K+
Sbjct: 148 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKI 204
Query: 534 SDFGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQK 591
DFG +R + D ++ + ++ PE + +T +SDV+S+G+ L EL + G
Sbjct: 205 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 264
Query: 592 PIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKK 651
P + F + +KE F +L + E + + K C + K
Sbjct: 265 PYPGMPVDSK------FYKMIKEG--FRML-------SPEHAPAEMYDIMKTCWDADPLK 309
Query: 652 RPTMKE 657
RPT K+
Sbjct: 310 RPTFKQ 315
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+++D + +V+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 386 EMATDNFNTNRILGQGGQGTV-YKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILS 441
++ ++F+ ++LG+G G V GR A+K K ++ + + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
H + L + V E+ G L+ ++ + E T E E+ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLHS + +RDIK N++LD K++DFG + + D + T GT YL
Sbjct: 118 LEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLA 173
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE + + D + GVV+ E++ G+ P + D E RLFE++
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------RLFELI 217
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHN 677
++ + T++ AK L + KK P + LGG S +M+H
Sbjct: 218 LMEEIRFPR-----TLSPEAKSLLAGLLKKDPKQR-----LGG-GPSDAKEVMEHR 262
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 43/306 (14%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYK----GMLTNGRIVAIKKSKLVDESNI-- 430
T+L + E + + + LG G G V + G++ + + + L +++
Sbjct: 33 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 92
Query: 431 -EQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
E ++E+ +LS + NH N+V LLG C L++ E+ G L ++ + + F
Sbjct: 93 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 152
Query: 485 -----------PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKV 533
+ E L + +V+ + +L S I HRD+ + NILL K+
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKI 209
Query: 534 SDFGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQK 591
DFG +R + D ++ + ++ PE + +T +SDV+S+G+ L EL + G
Sbjct: 210 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 269
Query: 592 PIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKK 651
P + F + +KE F +L + E + + K C + K
Sbjct: 270 PYPGMPVDSK------FYKMIKEG--FRML-------SPEHAPAEMYDIMKTCWDADPLK 314
Query: 652 RPTMKE 657
RPT K+
Sbjct: 315 RPTFKQ 320
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRN 447
D F R LG G G V+ + + + K+ D S + EQ E+ +L ++H N
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYLH 506
++K+ + +V E G L + I Q ++ + ++ +AL Y H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 507 SAASIPIYHRDIKSANILLDD---KYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
S + H+D+K NIL D K+ DFG + D+ +T GT Y+ PE
Sbjct: 142 SQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPE 196
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY 607
F+ T K D++S GVV+ LLTG P T EE + Y
Sbjct: 197 VFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+ KL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 156
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+++D + KV+DFG ++ V T + GT YL PE
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPE 209
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 386 EMATDNFNTNRILGQGGQGTV-YKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILS 441
++ ++F+ ++LG+G G V GR A+K K ++ + + + E +L
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
H + L + V E+ G L+ ++ + E T E E+ A
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 120
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLHS + +RDIK N++LD K++DFG + + D + T GT YL
Sbjct: 121 LEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLA 176
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE + + D + GVV+ E++ G+ P + D E RLFE++
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------RLFELI 220
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHN 677
++ + T++ AK L + KK P + LGG S +M+H
Sbjct: 221 LMEEIRFPR-----TLSPEAKSLLAGLLKKDPKQR-----LGG-GPSDAKEVMEHR 265
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+ KL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 156
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+++D + KV+DFG ++ V T + GT YL PE
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPE 209
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 43/306 (14%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYK----GMLTNGRIVAIKKSKLVDESNI-- 430
T+L + E + + + LG G G V + G++ + + + L +++
Sbjct: 26 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE 85
Query: 431 -EQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF---- 484
E ++E+ +LS + NH N+V LLG C L++ E+ G L ++ + + F
Sbjct: 86 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 145
Query: 485 -----------PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKV 533
+ E L + +V+ + +L S I HRD+ + NILL K+
Sbjct: 146 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKI 202
Query: 534 SDFGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQK 591
DFG +R + D ++ + ++ PE + +T +SDV+S+G+ L EL + G
Sbjct: 203 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 262
Query: 592 PIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKK 651
P + F + +KE F +L + E + + K C + K
Sbjct: 263 PYPGMPVDSK------FYKMIKEG--FRML-------SPEHAPAEMYDIMKTCWDADPLK 307
Query: 652 RPTMKE 657
RPT K+
Sbjct: 308 RPTFKQ 313
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLTN----GRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F R LG G G V ML G A+K K K+V IE +NE I
Sbjct: 42 DQFERIRTLGTGSFGRV---MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + KV+DFG ++ V T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLAGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+ KL + +V E+ P G ++ ++ + F E R A ++
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFX---EPHARFYAAQIVLTFE 156
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+++D + KV+DFG ++ V T + GT YL PE
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPE 209
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLXGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 14/236 (5%)
Query: 376 KTKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSK-LVDESNIEQF 433
K K+ + ++ +G+G G+V K + +G+I+A+K+ + VDE +Q
Sbjct: 8 KLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQL 67
Query: 434 INEV-AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG--TLYQYIHDQTEEFPITWEI 490
+ ++ ++ + +V+ G + E + Y+Y++ ++ I EI
Sbjct: 68 LMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV-IPEEI 126
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
+I + AL +L ++ I HRDIK +NILLD K+ DFG S ++ +
Sbjct: 127 LGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAK 182
Query: 551 TRVQGTFGYLDPEYFRSSQ----FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
TR G Y+ PE S + +SDV+S G+ L EL TG+ P +S D+
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ 238
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 14/216 (6%)
Query: 391 NFNTNRILGQGGQGTV----YKGMLTNGRIVAIKKSKLVDESNIEQFINEV-AILSQINH 445
+F+ +++G+G G V +K + ++K ++ + + ++E +L + H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALCY 504
+V L + V ++I G L+ ++ + E R R A E++ AL Y
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGY 154
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHS + I +RD+K NILLD + ++DFG + I+ T+ GT YL PE
Sbjct: 155 LHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFCGTPEYLAPEV 210
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ D + G VL E+L G P S ++ E
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 28 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 140
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D++ +V+DFG ++ V T + GT YL
Sbjct: 141 FEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 193
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 127
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 128 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 183
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 184 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 236
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 237 I--------RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 271
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 390 DNFNTNRILGQGGQGTVY--KGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQIN 444
D F + LG G G V K M T G A+K K K+V IE +NE IL +N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMET-GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALC 503
+VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLTFE 155
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPE 208
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
S + + D ++ GV++ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESN 429
T E D ++T LG G V K G+ + + +++K V +
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 430 IEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWE 489
IE+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 61 IER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 490 IRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMID 545
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--ID 169
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 170 FGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 174
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLA 227
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 30 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 89
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 90 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 146
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 147 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 202
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 203 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 255
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 256 I--------RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 290
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 44/310 (14%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTV-YKGMLTNGRIVA---IKKSKLVDESNIEQFINEV 437
+M+ + + F ++LG+G G V GR A +KK +V + + + E
Sbjct: 2 AMDPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTEN 61
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AI 496
+L H + L + V E+ G L+ ++ + + E R R
Sbjct: 62 RVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGA 117
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
E+ AL YLHS ++ +RD+K N++LD K++DFG + + D + GT
Sbjct: 118 EIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GT 174
Query: 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENR 616
YL PE + + D + GVV+ E++ G+ P + D E +
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------K 218
Query: 617 LFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQH 676
LFE++ ++ + T+ AK L+ + KK P + LGG + IMQH
Sbjct: 219 LFELILMEEIRFPR-----TLGPEAKSLLSGLLKKDPKQR-----LGG-GSEDAKEIMQH 267
Query: 677 NCDDIDFVAG 686
F AG
Sbjct: 268 R-----FFAG 272
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 22/230 (9%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQF-----INEVAIL 440
MAT + +G G GTVYK +G VA+K ++ + + EVA+L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 441 SQIN---HRNVVKLLGCCL----ETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRL 492
++ H NVV+L+ C + E+ + LV+E + + L Y+ D+ + E
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIK 123
Query: 493 RIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
+ + L +LH+ I HRD+K NIL+ K++DFG +R + Q LT
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALTP- 178
Query: 553 VQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
V T Y PE S + D++S G + E+ +KP+ +SE D+
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 227
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 10 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 126
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 127 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 182
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 183 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 235
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 236 I--------RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 270
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFA---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 38 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 97
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 154
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 155 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 210
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 211 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 263
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 264 I--------RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 298
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCC 455
+G+G G VYK G A+KK +L DE I E++IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 456 LETEVPLLVYEFIPN--GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPI 513
+ +LV+E + L E +++ + + Y H +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCHDRR---V 121
Query: 514 YHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR-SSQFTE 572
HRD+K N+L++ + K++DFG +R+ I T V T Y P+ S +++
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 573 KSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
D++S G + E++ G P+ SE D+
Sbjct: 181 TIDIWSVGCIFAEMVNGA-PLFPGVSEADQ 209
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFX---EPHARFYAAQIVLT 174
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 227
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 127
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 128 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 183
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 184 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 236
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 237 I--------RGQVF--FRQRVSXECQH--------LIRWCLALRPSDRPTFEE 271
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 43 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 102
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 103 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 159
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 160 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 215
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 216 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 268
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 269 I--------RGQVF--FRQRVSXECQH--------LIRWCLALRPSDRPTFEE 303
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
TD + LG+G V + G +I+ KK D +E+ E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSD 500
+ H N+V+L E LV++ + G L++ I + E + I+ I S
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ---QILESV 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTF 557
C+L+ I HRD+K N+LL K + K++DFG + V DQ GT
Sbjct: 117 NHCHLNG-----IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-FAGTP 170
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDS 598
GYL PE R + + D+++ GV+L LL G P D
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ 211
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCC 455
+G+G G VYK G A+KK +L DE I E++IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 456 LETEVPLLVYEFIPN--GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPI 513
+ +LV+E + L E +++ + + Y H +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCHDRR---V 121
Query: 514 YHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR-SSQFTE 572
HRD+K N+L++ + K++DFG +R+ I T V T Y P+ S +++
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 573 KSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
D++S G + E++ G P+ SE D+
Sbjct: 181 TIDIWSVGCIFAEMVNGT-PLFPGVSEADQ 209
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFX---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 42 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 154
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 207
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 10 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 126
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 127 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 182
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 183 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 235
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 236 I--------RGQVF--FRQRVSXECQH--------LIRWCLALRPSDRPTFEE 270
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 11 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 127
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 128 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 183
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 184 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 236
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 237 I--------RGQVF--FRQRVSXECQH--------LIRWCLALRPXDRPTFEE 271
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
TD + LG+G V + G +I+ KK D +E+ E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSD 500
+ H N+V+L E LV++ + G L++ I + E + I+ I S
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ---QILESV 116
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTF 557
C+L+ I HRD+K N+LL K + K++DFG + V DQ GT
Sbjct: 117 NHCHLNG-----IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-FAGTP 170
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
GYL PE R + + D+++ GV+L LL G P D
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED 210
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFX---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 23 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 139
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 140 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 195
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 196 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 248
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 249 I--------RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 283
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFX---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 34/225 (15%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRI----VAIKKSKLVD-ESNIEQFINEVAILSQINH 445
+F + LG+GG G V++ ++ AIK+ +L + E E+ + EV L+++ H
Sbjct: 6 DFEPIQCLGRGGFGVVFEA---KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH 62
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITW------------EIRLR 493
+V+ LE + P LY + +E W + L
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID---QTHLT 550
I +++++A+ +LHS + HRD+K +NI KV DFG ++ D QT LT
Sbjct: 123 IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 551 --------TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELL 587
T GT Y+ PE + ++ K D++S G++L ELL
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 386 EMATDNFNTNRILGQGGQGTV-YKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILS 441
++ ++F+ ++LG+G G V GR A+K K ++ + + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
H + L + V E+ G L+ ++ + E T E E+ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLHS + +RDIK N++LD K++DFG + + D + GT YL
Sbjct: 118 LEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLA 173
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE + + D + GVV+ E++ G+ P + D E RLFE++
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------RLFELI 217
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHN 677
++ + T++ AK L + KK P + LGG S +M+H
Sbjct: 218 LMEEIRFPR-----TLSPEAKSLLAGLLKKDPKQR-----LGG-GPSDAKEVMEHR 262
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 19/227 (8%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLV--DESNIEQFINEVAILSQI 443
MAT + +G G GTVYK +G VA+K ++ +E + EVA+L ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 444 N---HRNVVKLLGCCL----ETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
H NVV+L+ C + E+ + LV+E + + L Y+ D+ + E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
+ L +LH+ I HRD+K NIL+ K++DFG +R + Q L V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALAP-VVV 173
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
T Y PE S + D++S G + E+ +KP+ +SE D+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 377 TKLFTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE- 431
TKL E E + +LG GG G+VY G+ +++ VAIK K ++ D +
Sbjct: 38 TKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN 97
Query: 432 --QFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPI 486
+ EV +L +++ V++LL + +L+ E P L+ +I TE +
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGAL 154
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMID 545
E+ +V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D
Sbjct: 155 QEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKD 210
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
+ T GT Y PE+ R ++ +S V+S G++L +++ G P E D+ +
Sbjct: 211 TVY--TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEI 263
Query: 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
+ ++F RV E + L + CL + RPT +E
Sbjct: 264 I--------RGQVF--FRQRVSXECQH--------LIRWCLALRPSDRPTFEE 298
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 15/210 (7%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCC 455
+G+G G VYK G A+KK +L DE I E++IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 456 LETEVPLLVYEFIPN--GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPI 513
+ +LV+E + L E +++ + + Y H +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCHDRR---V 121
Query: 514 YHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR-SSQFTE 572
HRD+K N+L++ + K++DFG +R+ I T + T Y P+ S +++
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 573 KSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
D++S G + E++ G P+ SE D+
Sbjct: 181 TIDIWSVGCIFAEMVNGT-PLFPGVSEADQ 209
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 44/302 (14%)
Query: 390 DNFNTNRILGQGGQGTV-YKGMLTNGRIVA---IKKSKLVDESNIEQFINEVAILSQINH 445
+ F ++LG+G G V GR A +KK +V + + + E +L H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDALCY 504
+ L + V E+ G L+ ++ + + E R R E+ AL Y
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDY 263
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHS ++ +RD+K N++LD K++DFG + + D + T GT YL PE
Sbjct: 264 LHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEV 320
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624
+ + D + GVV+ E++ G+ P + D E +LFE++
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------KLFELILME 364
Query: 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHNCDDIDFV 684
++ + T+ AK L+ + KK P + LGG + IMQH F
Sbjct: 365 EIRFPR-----TLGPEAKSLLSGLLKKDPKQR-----LGG-GSEDAKEIMQHR-----FF 408
Query: 685 AG 686
AG
Sbjct: 409 AG 410
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 127/305 (41%), Gaps = 44/305 (14%)
Query: 387 MATDNFNTNRILGQGGQGTV-YKGMLTNGRIVA---IKKSKLVDESNIEQFINEVAILSQ 442
+ + F ++LG+G G V GR A +KK +V + + + E +L
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
H + L + V E+ G L+ ++ + + E R R E+ A
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSA 263
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLHS ++ +RD+K N++LD K++DFG + + D + T GT YL
Sbjct: 264 LDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLA 320
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE + + D + GVV+ E++ G+ P + D E +LFE++
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------KLFELI 364
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHNCDDI 681
++ + T+ AK L+ + KK P + LGG + IMQH
Sbjct: 365 LMEEIRFPR-----TLGPEAKSLLSGLLKKDPKQR-----LGG-GSEDAKEIMQHR---- 409
Query: 682 DFVAG 686
F AG
Sbjct: 410 -FFAG 413
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 386 EMATDNFNTNRILGQGGQGTV-YKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILS 441
++ ++F+ ++LG+G G V GR A+K K ++ + + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
H + L + V E+ G L+ ++ + E T E E+ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLHS + +RDIK N++LD K++DFG + + D + GT YL
Sbjct: 118 LEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLA 173
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE + + D + GVV+ E++ G+ P + D E RLFE++
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------RLFELI 217
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHN 677
++ + T++ AK L + KK P + LGG S +M+H
Sbjct: 218 LMEEIRFPR-----TLSPEAKSLLAGLLKKDPKQR-----LGG-GPSDAKEVMEHR 262
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 38/296 (12%)
Query: 386 EMATDNFNTNRILGQGGQGTV-YKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILS 441
++ ++F+ ++LG+G G V GR A+K K ++ + + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA 501
H + L + V E+ G L+ ++ + E T E E+ A
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLHS + +RDIK N++LD K++DFG + + D + GT YL
Sbjct: 118 LEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPEYLA 173
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE + + D + GVV+ E++ G+ P + D E RLFE++
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------RLFELI 217
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHN 677
++ + T++ AK L + KK P + LGG S +M+H
Sbjct: 218 LMEEIRFPR-----TLSPEAKSLLAGLLKKDPKQR-----LGG-GPSDAKEVMEHR 262
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 61 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 114
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 115 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 169
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 223
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLV--DESNIEQFINEVAILSQI 443
MAT + +G G GTVYK +G VA+K ++ +E + EVA+L ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 444 N---HRNVVKLLGCCL----ETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
H NVV+L+ C + E+ + LV+E + + L Y+ D+ + E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
+ L +LH+ I HRD+K NIL+ K++DFG +R V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-- 173
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
T Y PE S + D++S G + E+ +KP+ +SE D+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 36 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFX---EPHARFYAAQIVLT 148
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 149 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 201
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 61 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 114
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 115 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 169
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 223
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESN 429
T E D ++T LG G V K G+ + + +++K V +
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 430 IEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWE 489
IE+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 61 IER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 490 IRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMID 545
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--ID 169
Query: 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 40/225 (17%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKK--SKLVDESNIEQFINEVAILSQIN-HRNVVKLLG 453
LG+G G V+K + G +VA+KK + ++ ++ E+ IL++++ H N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 454 CCL---ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAAS 510
+ +V LV++++ L+ I E P+ + + ++ + YLHS
Sbjct: 77 VLRADNDRDV-YLVFDYMETD-LHAVIRANILE-PVH---KQYVVYQLIKVIKYLHSGG- 129
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGASRSVM---------------------IDQTHL 549
+ HRD+K +NILL+ + KV+DFG SRS + DQ L
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 550 TTRVQGTFGYLDPEYFR-SSQFTEKSDVYSFGVVLVELLTGQKPI 593
T V T Y PE S+++T+ D++S G +L E+L G KPI
Sbjct: 188 TDYV-ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 126/308 (40%), Gaps = 47/308 (15%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTN----GRIVA---IKKSKLVDESNIEQFINEVAI 439
MA N L G+GT K +L GR A +KK +V + + + E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEV 498
L H + L + V E+ G L+ ++ + + E R R E+
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEI 118
Query: 499 SDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
AL YLHS ++ +RD+K N++LD K++DFG + + D + GT
Sbjct: 119 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPE 175
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF 618
YL PE + + D + GVV+ E++ G+ P + D E +LF
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------KLF 219
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHNC 678
E++ ++ + T+ AK L+ + KK P + LGG + IMQH
Sbjct: 220 ELILMEEIRFPR-----TLGPEAKSLLSGLLKKDPKQR-----LGG-GSEDAKEIMQHR- 267
Query: 679 DDIDFVAG 686
F AG
Sbjct: 268 ----FFAG 271
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 19/227 (8%)
Query: 387 MATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLV--DESNIEQFINEVAILSQI 443
MAT + +G G GTVYK + G VA+K ++ +E + EVA+L ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 444 N---HRNVVKLLGCCL----ETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
H NVV+L+ C + E+ + LV+E + + L Y+ D+ + E +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
+ L +LH+ I HRD+K NIL+ K++DFG +R + Q L V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALDP-VVV 173
Query: 556 TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
T Y PE S + D++S G + E+ +KP+ +SE D+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 15/228 (6%)
Query: 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFIN----- 435
+++++ + LG+G TVYK N +IVAIKK KL S + IN
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 436 EVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
E+ +L +++H N++ LL LV++F+ L I D + + I+ +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPS-HIKAYML 119
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG 555
+ + L YLH I HRD+K N+LLD+ K++DFG ++S +V
Sbjct: 120 MTLQ-GLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV- 174
Query: 556 TFGYLDPE-YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
T Y PE F + + D+++ G +L ELL + P DS+ D+
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQ 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 25/234 (10%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKL----VDESNI 430
T E D ++T LG G V K G+ + + +++K V +I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL +I H NV+ L +L+ E + G L+ ++ E+ +T E
Sbjct: 62 ER---EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL---AEKESLTEEE 115
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMIDQ 546
++ + + YLHS + I H D+K NI+L D K R K+ DFG + ID
Sbjct: 116 ATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDF 170
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ + GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGC 454
+G+G GTV+K IVA+K+ +L D E + E+ +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514
+ LV+EF + L +Y + + EI ++ L + HS +
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRN---VL 123
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE-YFRSSQFTEK 573
HRD+K N+L++ K++DFG +R+ I + V T Y P+ F + ++
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 574 SDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
D++S G + EL +P+ + +D+
Sbjct: 183 IDMWSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 398 LGQGGQGTVYKG-MLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINHRNVVKLLG 453
LG G G V G G VA+K + K+ + + E+ L H +++KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 454 CCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+V E++ G L+ YI H + EE E R R+ ++ A+ Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEM----EAR-RLFQQILSAVDYCHRHMVV 133
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT 571
HRD+K N+LLD AK++DFG S ++M D L T G+ Y PE +
Sbjct: 134 ---HRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRTSC-GSPNYAAPEVISGRLYA 188
Query: 572 -EKSDVYSFGVVLVELLTGQKP 592
+ D++S GV+L LL G P
Sbjct: 189 GPEVDIWSCGVILYALLCGTLP 210
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ ++ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+++D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 389 TDNFNTNRILGQGGQGTVY----KGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN 444
+D F LG+G VY KG + +KK+ VD+ + E+ +L +++
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVR---TEIGVLLRLS 106
Query: 445 HRNVVKLLGCCLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC 503
H N++KL ET + LV E + G L+ I E+ + ++ +A+
Sbjct: 107 HPNIIKL-KEIFETPTEISLVLELVTGGELFDRI---VEKGYYSERDAADAVKQILEAVA 162
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
YLH I HRD+K N+L K++DFG S+ +++ L V GT GY
Sbjct: 163 YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK--IVEHQVLMKTVCGTPGYC 217
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
PE R + + D++S G++ LL G +P
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 126/305 (41%), Gaps = 44/305 (14%)
Query: 387 MATDNFNTNRILGQGGQGTV-YKGMLTNGRIVA---IKKSKLVDESNIEQFINEVAILSQ 442
+ + F ++LG+G G V GR A +KK +V + + + E +L
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
H + L + V E+ G L+ ++ + + E R R E+ A
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSA 120
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
L YLHS ++ +RD+K N++LD K++DFG + + D + GT YL
Sbjct: 121 LDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLA 177
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
PE + + D + GVV+ E++ G+ P + D E +LFE++
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE----------------KLFELI 221
Query: 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHNCDDI 681
++ + T+ AK L+ + KK P + LGG + IMQH
Sbjct: 222 LMEEIRFPR-----TLGPEAKSLLSGLLKKDPKQR-----LGG-GSEDAKEIMQHR---- 266
Query: 682 DFVAG 686
F AG
Sbjct: 267 -FFAG 270
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 20/259 (7%)
Query: 384 ELEMATDNFNTNRILGQGGQGTV-YKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAI 439
E+ + D+F +++G+G V M G++ A+K K ++ + F E +
Sbjct: 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDV 114
Query: 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
L + R + +L + LV E+ G L + E P E+ E+
Sbjct: 115 LVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPA--EMARFYLAEIV 172
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
A+ +H + HRDIK NILLD +++DFG+ + D T + GT Y
Sbjct: 173 MAIDSVHRLGYV---HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDY 229
Query: 560 LDPEYFRS-------SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAM 612
L PE ++ + + D ++ GV E+ GQ P + + E + ++
Sbjct: 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHY---- 285
Query: 613 KENRLFEVLDARVLKEAKE 631
KE+ ++D V +EA++
Sbjct: 286 KEHLSLPLVDEGVPEEARD 304
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLVDESNIEQFIN-EVAILSQINHR 446
N+ + LG+G G V T G+ VA+K K++ +S+++ I E++ L + H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDALCY 504
+++KL + ++V E+ N L+ YI D+ E E R R ++ A+ Y
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE----QEAR-RFFQQIISAVEY 118
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
H I HRD+K N+LLD+ K++DFG S ++M D L T G+ Y PE
Sbjct: 119 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEV 173
Query: 565 FRSSQFT-EKSDVYSFGVVLVELLTGQKP 592
+ + DV+S GV+L +L + P
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLVDESNIEQFIN-EVAILSQINHR 446
N+ + LG+G G V T G+ VA+K K++ +S+++ I E++ L + H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDALCY 504
+++KL + ++V E+ N L+ YI D+ E E R R ++ A+ Y
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE----QEAR-RFFQQIISAVEY 128
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
H I HRD+K N+LLD+ K++DFG S ++M D L T G+ Y PE
Sbjct: 129 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEV 183
Query: 565 FRSSQFT-EKSDVYSFGVVLVELLTGQKP 592
+ + DV+S GV+L +L + P
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLVDESNIEQFIN-EVAILSQINHR 446
N+ + LG+G G V T G+ VA+K K++ +S+++ I E++ L + H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDALCY 504
+++KL + ++V E+ N L+ YI D+ E E R R ++ A+ Y
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE----QEAR-RFFQQIISAVEY 122
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
H I HRD+K N+LLD+ K++DFG S ++M D L T G+ Y PE
Sbjct: 123 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEV 177
Query: 565 FRSSQFT-EKSDVYSFGVVLVELLTGQKP 592
+ + DV+S GV+L +L + P
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLVDESNIEQFIN-EVAILSQINHR 446
N+ + LG+G G V T G+ VA+K K++ +S+++ I E++ L + H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDALCY 504
+++KL + ++V E+ N L+ YI D+ E E R R ++ A+ Y
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSE----QEAR-RFFQQIISAVEY 127
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
H I HRD+K N+LLD+ K++DFG S ++M D L T G+ Y PE
Sbjct: 128 CHRHK---IVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEV 182
Query: 565 FRSSQFT-EKSDVYSFGVVLVELLTGQKP 592
+ + DV+S GV+L +L + P
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL----- 451
LG GG G V+ + + + VAIKK L D +++ + E+ I+ +++H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 452 ---------LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502
+G E +V E++ + + E+ P+ E ++ L
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETD-----LANVLEQGPLLEEHARLFMYQLLRGL 133
Query: 503 CYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQG--TFGY 559
Y+HSA + HRD+K AN+ ++ + K+ DFG +R + +H +G T Y
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWY 190
Query: 560 LDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQ 590
P S + +T+ D+++ G + E+LTG+
Sbjct: 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 398 LGQGGQGTVYKGM--LTNGRIVAIKKSKLVDESNIE-QFINEVAILSQINHRNVVKLLGC 454
LG+G TVYKG LT+ +VA+K+ +L E I EV++L + H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514
+ LV+E++ + L QY+ D + ++L + ++ L Y H +
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH-NVKLFL-FQLLRGLAYCHRQK---VL 122
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR-SSQFTEK 573
HRD+K N+L++++ K++DFG +R+ I V T Y P+ S+ ++ +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQ 181
Query: 574 SDVYSFGVVLVELLTGQKPIRSTDSEE 600
D++ G + E+ TG+ + EE
Sbjct: 182 IDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYKGMLTN------GRIVAIKKSKLVDESNIEQFINEVAILSQ 442
TD++ LG+G V + + +I+ KK D +E+ E I
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER---EARICRL 86
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSD 500
+ H N+V+L E LV++ + G L++ I + E + I ++ +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH-----QILE 141
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTF 557
++ ++H I HRD+K N+LL K + K++DFG + V +Q GT
Sbjct: 142 SVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG-FAGTP 197
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GYL PE R + + D+++ GV+L LL G P D +
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHK 240
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT YL
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
P S + + D ++ GV++ E+ G P
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 19/233 (8%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIK---KSKLVDESNIEQFINE 436
+ + + ++F+ +RI+G+GG G VY + G++ A+K K ++ + +NE
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 437 VAILSQINHRNVVKLLGCCLETEVP---LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR 493
+LS ++ + ++ P + + + G L+ ++ + E +R
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMR 295
Query: 494 I-AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
A E+ L ++H+ + +RD+K ANILLD+ ++SD G + + H +
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 351
Query: 553 VQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
GT GY+ PE + + +D +S G +L +LL G P R +++ +
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 19/233 (8%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIK---KSKLVDESNIEQFINE 436
+ + + ++F+ +RI+G+GG G VY + G++ A+K K ++ + +NE
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 437 VAILSQINHRNVVKLLGCCLETEVP---LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR 493
+LS ++ + ++ P + + + G L+ ++ + E +R
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMR 295
Query: 494 I-AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
A E+ L ++H+ + +RD+K ANILLD+ ++SD G + + H +
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 351
Query: 553 VQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
GT GY+ PE + + +D +S G +L +LL G P R +++ +
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIK---KSKLVDESNIEQFINE 436
+ + + ++F+ +RI+G+GG G VY + G++ A+K K ++ + +NE
Sbjct: 179 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 238
Query: 437 VAILSQINHRNVVKLLGCCLETEVP---LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR 493
+LS ++ + ++ P + + + G L+ ++ + E +R
Sbjct: 239 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMR 294
Query: 494 I-AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
A E+ L ++H+ + +RD+K ANILLD+ ++SD G + + H +
Sbjct: 295 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 350
Query: 553 VQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT GY+ PE + + +D +S G +L +LL G P R +++
Sbjct: 351 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 19/229 (8%)
Query: 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIK---KSKLVDESNIEQFINE 436
+ + + ++F+ +RI+G+GG G VY + G++ A+K K ++ + +NE
Sbjct: 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE 239
Query: 437 VAILSQINHRNVVKLLGCCLETEVP---LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR 493
+LS ++ + ++ P + + + G L+ ++ + E +R
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMR 295
Query: 494 I-AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552
A E+ L ++H+ + +RD+K ANILLD+ ++SD G + + H +
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV- 351
Query: 553 VQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
GT GY+ PE + + +D +S G +L +LL G P R +++
Sbjct: 352 --GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 44/279 (15%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINEVAILSQI 443
+ +LG GG G+VY G+ +++ VAIK K ++ D + + EV +L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 444 N--HRNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+ V++LL + +L+ E P L+ +I TE + E+ +V +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLE 121
Query: 501 ALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T GT Y
Sbjct: 122 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TDFDGTRVY 175
Query: 560 LDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF 618
PE+ R ++ +S V+S G++L +++ G P E D+ ++G ++F
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIG--------GQVF 222
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
RV E + L + CL + RPT +E
Sbjct: 223 --FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 251
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 16/219 (7%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ + F R Q G G Y R ++ + + V IE+ EV IL +I H
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR-RGVSREEIER---EVNILREIRH 74
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
N++ L +L+ E + G L+ ++ E+ +T + + ++ D + YL
Sbjct: 75 PNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYL 131
Query: 506 HSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
HS I H D+K NI+L DK R K+ DFG + I+ + + GT ++
Sbjct: 132 HSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEFKNIFGTPEFVA 186
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE ++D++S GV+ LL+G P +E
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 18/224 (8%)
Query: 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESN--IEQFINEVAILSQIN 444
+ D + LG+G G VYK + T VAIK+ +L E I EV++L ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 445 HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
HRN+++L L++E+ N L +Y+ + ++ + ++ + + +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEND-LKKYMDKNPD---VSMRVIKSFLYQLINGVNF 147
Query: 505 LHSAASIPIYHRDIKSANILL-----DDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
HS + HRD+K N+LL + K+ DFG +R+ I T + T Y
Sbjct: 148 CHSRRCL---HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWY 203
Query: 560 LDPEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
PE S+ ++ D++S + E+L + P+ DSE D+
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFPGDSEIDQ 246
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 111/293 (37%), Gaps = 71/293 (24%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLVY------------------EFIP---N 470
++E+ IL I H NVV LLG C + PL+V EF+P
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 129
Query: 471 GTLYQYIHDQTEEFPITWEIRLRIA-------------------IEVSDA---------- 501
G ++ D P+ + RL +E +A
Sbjct: 130 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT 189
Query: 502 ----LCY-------LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
+CY + AS HRD+ + NILL +K K+ DFG +R + D ++
Sbjct: 190 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 249
Query: 551 T-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEED 601
+ ++ PE +T +SDV+SFGV+L E+ + G P +E+
Sbjct: 250 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 302
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 111/293 (37%), Gaps = 71/293 (24%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLVY------------------EFIP---N 470
++E+ IL I H NVV LLG C + PL+V EF+P
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 131
Query: 471 GTLYQYIHDQTEEFPITWEIRLRIA-------------------IEVSDA---------- 501
G ++ D P+ + RL +E +A
Sbjct: 132 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT 191
Query: 502 ----LCY-------LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
+CY + AS HRD+ + NILL +K K+ DFG +R + D ++
Sbjct: 192 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251
Query: 551 T-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEED 601
+ ++ PE +T +SDV+SFGV+L E+ + G P +E+
Sbjct: 252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 304
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 16/219 (7%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ + F R Q G G Y R ++ + + V IE+ EV IL +I H
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR-RGVSREEIER---EVNILREIRH 67
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
N++ L +L+ E + G L+ ++ E+ +T + + ++ D + YL
Sbjct: 68 PNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYL 124
Query: 506 HSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
HS I H D+K NI+L DK R K+ DFG + I+ + + GT ++
Sbjct: 125 HSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEFKNIFGTPEFVA 179
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE ++D++S GV+ LL+G P +E
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 111/293 (37%), Gaps = 71/293 (24%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLVY------------------EFIP---N 470
++E+ IL I H NVV LLG C + PL+V EF+P
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 138
Query: 471 GTLYQYIHDQTEEFPITWEIRLRIA-------------------IEVSDA---------- 501
G ++ D P+ + RL +E +A
Sbjct: 139 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT 198
Query: 502 ----LCY-------LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
+CY + AS HRD+ + NILL +K K+ DFG +R + D ++
Sbjct: 199 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 258
Query: 551 T-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEED 601
+ ++ PE +T +SDV+SFGV+L E+ + G P +E+
Sbjct: 259 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 311
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 17/202 (8%)
Query: 398 LGQGGQGTVYKG-MLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINHRNVVKLLG 453
LG G G V G G VA+K + K+ + + E+ L H +++KL
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 454 CCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+V E++ G L+ YI H + EE E R R+ ++ A+ Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEM----EAR-RLFQQILSAVDYCHRHMVV 133
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT 571
HRD+K N+LLD AK++DFG S ++M D L G+ Y PE +
Sbjct: 134 ---HRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRDSC-GSPNYAAPEVISGRLYA 188
Query: 572 -EKSDVYSFGVVLVELLTGQKP 592
+ D++S GV+L LL G P
Sbjct: 189 GPEVDIWSCGVILYALLCGTLP 210
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 44/286 (15%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINE 436
E E + +LG GG G+VY G+ +++ VAIK K ++ D + + E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 437 VAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLR 493
V +L +++ V++LL + +L+ E + P L+ +I TE + E+
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI---TERGALQEELARS 118
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTR 552
+V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T
Sbjct: 119 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TD 172
Query: 553 VQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611
GT Y PE+ R ++ +S V+S G++L +++ G P E D+ ++
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII------ 221
Query: 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
++F RV E + L + CL + RPT +E
Sbjct: 222 --RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 255
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 111/293 (37%), Gaps = 71/293 (24%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKG------MLTNGRIVAIKKSKL-VDESNIEQ 432
+ + + E D + LG+G G V + R VA+K K S
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLVY------------------EFIP---N 470
++E+ IL I H NVV LLG C + PL+V EF+P
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTK 136
Query: 471 GTLYQYIHDQTEEFPITWEIRLRIA-------------------IEVSDA---------- 501
G ++ D P+ + RL +E +A
Sbjct: 137 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLT 196
Query: 502 ----LCY-------LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
+CY + AS HRD+ + NILL +K K+ DFG +R + D ++
Sbjct: 197 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 256
Query: 551 T-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEED 601
+ ++ PE +T +SDV+SFGV+L E+ + G P +E+
Sbjct: 257 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 309
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGC 454
+G+G GTV+K IVA+K+ +L D E + E+ +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514
+ LV+EF + L +Y + + EI ++ L + HS +
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRN---VL 123
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE-YFRSSQFTEK 573
HRD+K N+L++ K+++FG +R+ I + V T Y P+ F + ++
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTS 182
Query: 574 SDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
D++S G + EL +P+ + +D+
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 16/219 (7%)
Query: 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH 445
E+ + F R Q G G Y R + + + V IE+ EV IL +I H
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSR-RGVSREEIER---EVNILREIRH 88
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
N++ L +L+ E + G L+ ++ E+ +T + + ++ D + YL
Sbjct: 89 PNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYL 145
Query: 506 HSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
HS I H D+K NI+L DK R K+ DFG + I+ + + GT ++
Sbjct: 146 HSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEFKNIFGTPEFVA 200
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE ++D++S GV+ LL+G P +E
Sbjct: 201 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT----NGRIVAIK---KSKLVDESNIEQFINEVAILSQ 442
D F+ + LG G G V ML +G A+K K K+V IE +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRV---MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI-AIEVSDA 501
+N +VKL + +V E++ G ++ ++ + F E R A ++
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFS---EPHARFYAAQIVLT 153
Query: 502 LCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
YLHS + + +RD+K N+L+D + +V+DFG ++ V T + GT L
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEALA 206
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE S + + D ++ GV++ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 30/258 (11%)
Query: 377 TKLFTSM--ELEMATDNFNTNRILGQGGQGTVYKGMLTNG-RIVAIK---KSKLVDESNI 430
K FTS ++ + ++F +++G+G G V L N ++ A+K K +++ +
Sbjct: 59 AKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET 118
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG---TLYQYIHDQ-TEEFPI 486
F E +L + + + L + LV ++ G TL D+ EE
Sbjct: 119 ACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMAR 178
Query: 487 TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546
+ + IAI+ L Y+H RDIK NIL+D +++DFG+ +M D
Sbjct: 179 FYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229
Query: 547 THLTTRVQGTFGYLDPEYFRS-----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEED 601
T ++ GT Y+ PE ++ ++ + D +S GV + E+L G+ P +
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA------ 283
Query: 602 KSLVGYFLEAMKENRLFE 619
+SLV + + M F+
Sbjct: 284 ESLVETYGKIMNHKERFQ 301
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE--SNIEQFINEVAILSQINHR 446
D + +G G G V G+ VAIKK + +N ++ + E+ IL H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 447 NVVKLLGCCLETEVPL-------LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVS 499
N++ + L VP +V + + L+Q IH P+T E ++
Sbjct: 115 NIIAIKDI-LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ---PLTLEHVRYFLYQLL 169
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV---MIDQTHLTTRVQGT 556
L Y+HSA I HRD+K +N+L+++ K+ DFG +R + + + T T
Sbjct: 170 RGLKYMHSAQVI---HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 557 FGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQK 591
Y PE S ++T+ D++S G + E+L ++
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIK--KSKLVDESNIEQFIN-EVAILSQINHRNVVKLLG 453
LG+G G V + VA+K +L+ +S++ + E++ L + H +++KL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 454 CCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPI 513
++V E+ G L+ YI E+ +T + R ++ A+ Y H I
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYI---VEKKRMTEDEGRRFFQQIICAIEYCHRHK---I 129
Query: 514 YHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT-E 572
HRD+K N+LLDD K++DFG S ++M D L T G+ Y PE +
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSC-GSPNYAAPEVINGKLYAGP 187
Query: 573 KSDVYSFGVVLVELLTGQKP 592
+ DV+S G+VL +L G+ P
Sbjct: 188 EVDVWSCGIVLYVMLVGRLP 207
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 427 ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTE--EF 484
E+N ++ I + + H N+VKL + LV E + G L++ I + E
Sbjct: 49 EANTQKEITALKLCE--GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET 106
Query: 485 PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILL---DDKYRAKVSDFGASRS 541
++ +R ++ A+ ++H + + HRD+K N+L +D K+ DFG +R
Sbjct: 107 EASYIMRKLVS-----AVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
Query: 542 VMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
D L T T Y PE + + E D++S GV+L +L+GQ P +S D
Sbjct: 159 KPPDNQPLKTPC-FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 397 ILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCC 455
ILG G G V+K T G +A K K + E+ NE+++++Q++H N+++L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
+LV E++ G L+ I D E + +T + ++ + + ++H + I H
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIID--ESYNLTELDTILFMKQICEGIRHMH---QMYILH 210
Query: 516 RDIKSANILL--DDKYRAKVSDFGASRSVMIDQTHLTTRVQ-GTFGYLDPEYFRSSQFTE 572
D+K NIL D + K+ DFG +R + +V GT +L PE +
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNFGTPEFLAPEVVNYDFVSF 267
Query: 573 KSDVYSFGVVLVELLTGQKP 592
+D++S GV+ LL+G P
Sbjct: 268 PTDMWSVGVIAYMLLSGLSP 287
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 17/198 (8%)
Query: 406 VYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465
V G +I+ KK D +E+ E I + H N+V+L E L++
Sbjct: 44 VLAGQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNIVRLHDSISEEGHHYLIF 100
Query: 466 EFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANI 523
+ + G L++ I + E + I+ ++ +A+ + H + HRD+K N+
Sbjct: 101 DLVTGGELFEDIVAREYYSEADASHCIQ-----QILEAVLHCHQMG---VVHRDLKPENL 152
Query: 524 LLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFG 580
LL K + K++DFG + V +Q GT GYL PE R + + D+++ G
Sbjct: 153 LLASKLKGAAVKLADFGLAIEVEGEQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDLWACG 211
Query: 581 VVLVELLTGQKPIRSTDS 598
V+L LL G P D
Sbjct: 212 VILYILLVGYPPFWDEDQ 229
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 35/256 (13%)
Query: 397 ILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLL---- 452
I +G G V+K L N VA+K L D+ + Q E+ + H N+++ +
Sbjct: 22 IKARGRFGCVWKAQLMND-FVAVKIFPLQDKQSW-QSEREIFSTPGMKHENLLQFIAAEK 79
Query: 453 -GCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
G LE E+ L+ F G+L Y+ ITW +A +S L YLH +
Sbjct: 80 RGSNLEVEL-WLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHE--DV 132
Query: 512 P----------IYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ-GTFGYL 560
P I HRD KS N+LL A ++DFG + + T Q GT Y+
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 561 DPEY------FRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE 614
PE F+ F + D+Y+ G+VL EL++ K + D D+ ++ + E +
Sbjct: 193 APEVLEGAINFQRDAFL-RIDMYAMGLVLWELVSRCK---AADGPVDEYMLPFEEEIGQH 248
Query: 615 NRLFEVLDARVLKEAK 630
L E+ + V K+ +
Sbjct: 249 PSLEELQEVVVHKKMR 264
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 44/286 (15%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINE 436
E E + +LG GG G+VY G+ +++ VAIK K ++ D + + E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 437 VAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLR 493
V +L +++ V++LL + +L+ E P L+ +I TE + E+
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARS 119
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTR 552
+V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T
Sbjct: 120 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TD 173
Query: 553 VQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611
GT Y PE+ R ++ +S V+S G++L +++ G P E D+ ++
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII------ 222
Query: 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
++F RV E + L + CL + RPT +E
Sbjct: 223 --RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 256
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 11/210 (5%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIV----AIKKSKLVDESNIEQFINEVAILSQINHR 446
+ R LG+GG Y+ + + V + KS L+ E+ E+AI +++
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
+VV G + + +V E +L + +H + + +T + + YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKA--VTEPEARYFMRQTIQGVQYLH 159
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
+ I HRD+K N+ L+D K+ DFG + + D T + GT Y+ PE
Sbjct: 160 NNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLC 215
Query: 567 SSQFTEKSDVYSFGVVLVELLTGQKPIRST 596
+ + D++S G +L LL G+ P ++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE--SNIEQFINEVAILSQINHR 446
D + +G G G V G+ VAIKK + +N ++ + E+ IL H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 447 NVVKLLGCCLETEVP------LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
N++ + L VP + V + L+Q IH P+T E ++
Sbjct: 114 NIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ---PLTLEHVRYFLYQLLR 169
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV---MIDQTHLTTRVQGTF 557
L Y+HSA I HRD+K +N+L+++ K+ DFG +R + + + T T
Sbjct: 170 GLKYMHSAQVI---HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 558 GYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQK 591
Y PE S ++T+ D++S G + E+L ++
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAI 439
F SM L++ + +G G V+K L N VA+K + D+ + Q EV
Sbjct: 21 FQSMPLQLL-------EVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSW-QNEYEVYS 71
Query: 440 LSQINHRNVVKLLGC---CLETEVPL-LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIA 495
L + H N+++ +G +V L L+ F G+L ++ ++W IA
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV----VSWNELCHIA 127
Query: 496 IEVSDALCYLHSAASIP---------IYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546
++ L YLH IP I HRDIKS N+LL + A ++DFG + +
Sbjct: 128 ETMARGLAYLHE--DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK 185
Query: 547 THLTTRVQ-GTFGYLDPEY------FRSSQFTEKSDVYSFGVVLVELLT 588
+ T Q GT Y+ PE F+ F + D+Y+ G+VL EL +
Sbjct: 186 SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFL-RIDMYAMGLVLWELAS 233
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 44/286 (15%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINE 436
E E + +LG GG G+VY G+ +++ VAIK K ++ D + + E
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 84
Query: 437 VAILSQIN--HRNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLR 493
V +L +++ V++LL + +L+ E P L+ +I TE + E+
Sbjct: 85 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARS 141
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTR 552
+V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T
Sbjct: 142 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TD 195
Query: 553 VQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611
GT Y PE+ R ++ +S V+S G++L +++ G P E D+ ++
Sbjct: 196 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII------ 244
Query: 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
++F RV E + L + CL + RPT +E
Sbjct: 245 --RGQVF--FRQRVSXECQH--------LIRWCLALRPSDRPTFEE 278
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 44/286 (15%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINE 436
E E + +LG GG G+VY G+ +++ VAIK K ++ D + + E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 437 VAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLR 493
V +L +++ V++LL + +L+ E P L+ +I TE + E+
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARS 119
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTR 552
+V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T
Sbjct: 120 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TD 173
Query: 553 VQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611
GT Y PE+ R ++ +S V+S G++L +++ G P E D+ ++
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII------ 222
Query: 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
++F RV E + L + CL + RPT +E
Sbjct: 223 --RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 256
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 44/286 (15%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINE 436
E E + +LG GG G+VY G+ +++ VAIK K ++ D + + E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 437 VAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLR 493
V +L +++ V++LL + +L+ E P L+ +I TE + E+
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARS 119
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTR 552
+V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T
Sbjct: 120 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TD 173
Query: 553 VQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611
GT Y PE+ R ++ +S V+S G++L +++ G P E D+ ++
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII------ 222
Query: 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
++F RV E + L + CL + RPT +E
Sbjct: 223 --RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 256
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 44/286 (15%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINE 436
E E + +LG GG G+VY G+ +++ VAIK K ++ D + + E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 437 VAILSQINH--RNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLR 493
V +L +++ V++LL + +L+ E P L+ +I TE + E+
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARS 118
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTR 552
+V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T
Sbjct: 119 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TD 172
Query: 553 VQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611
GT Y PE+ R ++ +S V+S G++L +++ G P E D+ ++
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII------ 221
Query: 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
++F RV E + L + CL + RPT +E
Sbjct: 222 --RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 255
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKK-SKLVDESNIEQF-INEVAILSQINHRNVVKLLGC 454
+G+G G V+K G+IVAIKK + D+ I++ + E+ +L Q+ H N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 455 CLETEVPLLVYEFIPNGTLYQ---YIHDQTEEF--PITWEIRLRIAIEVSDALCYLHSAA 509
LV+E+ + L++ Y E ITW+ A+ + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHKHN 122
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR-SS 568
I HRD+K NIL+ K+ DFG +R + + V T Y PE +
Sbjct: 123 CI---HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDT 178
Query: 569 QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK 602
Q+ DV++ G V ELL+G P+ S+ D+
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGV-PLWPGKSDVDQ 211
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 50/237 (21%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIE--QFINEVAILSQINHR 446
D + ++G G G V + R+VAIKK V E I+ + + E+AIL+++NH
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEF------PITWEIRLRIAIEVSD 500
+VVK+L +P V +F LY + +F P+ + L I + +
Sbjct: 113 HVVKVLDIV----IPKDVEKF---DELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYN 164
Query: 501 ALC---YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV--------------- 542
L Y+HSA I HRD+K AN L++ KV DFG +R+V
Sbjct: 165 LLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR 221
Query: 543 -----MIDQTHLTTRVQGTFGYLDPEYFRSSQ-------FTEKSDVYSFGVVLVELL 587
++ H + G++ ++R+ + +TE DV+S G + ELL
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQF----INEVAILSQINHRNVVKLL 452
+GQG G V+K G+ VA+KK + +E E F + E+ IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 453 GCCLETEVPL--------LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
C P LV++F + L + + +F ++ EI+ R+ + + L Y
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
+H I HRD+K+AN+L+ K++DFG +R+ + + R T Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 562 PEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE + + D++ G ++ E+ T + PI ++E+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQ 236
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 44/286 (15%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINE 436
E E + +LG GG G+VY G+ +++ VAIK K ++ D + + E
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 60
Query: 437 VAILSQIN--HRNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLR 493
V +L +++ V++LL + +L+ E P L+ +I TE + E+
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARS 117
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTR 552
+V +A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T
Sbjct: 118 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TD 171
Query: 553 VQGTFGYLDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611
GT Y PE+ R ++ +S V+S G++L +++ G P E D+ ++
Sbjct: 172 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII------ 220
Query: 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
++F RV E + L + CL + RPT +E
Sbjct: 221 --RGQVF--FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 254
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQF----INEVAILSQINHRNVVKLL 452
+GQG G V+K G+ VA+KK ++ E+ E F + E+ IL + H NVV L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHENVVNLI 82
Query: 453 GCCLETEVPL--------LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
C P LV++F + L + + +F ++ EI+ R+ + + L Y
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYY 139
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
+H I HRD+K+AN+L+ K++DFG +R+ + + R T Y
Sbjct: 140 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 562 PEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE + + D++ G ++ E+ T + PI ++E+
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQ 235
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQF----INEVAILSQINHRNVVKLL 452
+GQG G V+K G+ VA+KK ++ E+ E F + E+ IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 453 GCCLETEVPL--------LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
C P LV++F + L + + +F ++ EI+ R+ + + L Y
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
+H I HRD+K+AN+L+ K++DFG +R+ + + R T Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 562 PEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE + + D++ G ++ E+ T + PI ++E+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQ 236
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQF----INEVAILSQINHRNVVKLL 452
+GQG G V+K G+ VA+KK ++ E+ E F + E+ IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKK--VLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 453 GCCLETEVPL--------LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
C P LV++F + L + + +F ++ EI+ R+ + + L Y
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLS-EIK-RVMQMLLNGLYY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
+H I HRD+K+AN+L+ K++DFG +R+ + + R T Y
Sbjct: 141 IHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 562 PEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
PE + + D++ G ++ E+ T + PI ++E+
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQ 236
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 28/238 (11%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVA 438
F +E+ R+L +GG VY+ + +GR A+K+ +E I EV
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC 77
Query: 439 ILSQIN-HRNVVKLLGCCL-------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
+ +++ H N+V+ + L+ + G L +++ P++ +
Sbjct: 78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDT 137
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG------------- 537
L+I + A+ ++H PI HRD+K N+LL ++ K+ DFG
Sbjct: 138 VLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW 196
Query: 538 -ASRSVMIDQ--THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
A R ++++ T TT + T +D + + EK D+++ G +L L Q P
Sbjct: 197 SAQRRALVEEEITRNTTPMYRTPEIID--LYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 453 GCCLETEVPLLVYEFIPNGTLYQ----YIHDQTEEFPITWEIRLRIAIEVSDALCY---- 504
F P +L + YI + + ++ I++ + E L Y
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 505 ----LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTG 589
PE + E D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 25/207 (12%)
Query: 396 RILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFIN-EVAILSQINHRNVVKLLGC 454
+++G G G V++ L VAIKK L D+ +F N E+ I+ + H NVV L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKV-LQDK----RFKNRELQIMRIVKHPNVVDLKAF 100
Query: 455 CL-----ETEVPL-LVYEFIPNGTLYQ---YIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
+ EV L LV E++P T+Y+ + + P+ I+L + ++ +L Y+
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLL-IKLYM-YQLLRSLAYI 157
Query: 506 HSAASIPIYHRDIKSANILLDDKYRA-KVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS I I HRDIK N+LLD K+ DFG+++ ++ + +++ Y PE
Sbjct: 158 HS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--YRAPEL 212
Query: 565 -FRSSQFTEKSDVYSFGVVLVELLTGQ 590
F ++ +T D++S G V+ EL+ GQ
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 36/209 (17%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 453 GCCLETEVPLLVYEFIPNGTLYQ----YIHDQTEEFPITWEIRLRIAIEVSDALCY---- 504
F P +L + YI + + ++ I++ + E L Y
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 505 ----LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTG 589
PE + E D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 44/279 (15%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINEVAILSQI 443
+ +LG GG G+VY G+ +++ VAIK K ++ D + + EV +L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 444 N--HRNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+ V++LL + +L+ E P L+ +I TE + E+ +V +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLE 121
Query: 501 ALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T GT Y
Sbjct: 122 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TDFDGTRVY 175
Query: 560 LDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF 618
PE+ R ++ +S V+S G++L +++ G P E D+ ++ ++F
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII--------RGQVF 222
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
RV E + L + CL + RPT +E
Sbjct: 223 --FRQRVSSECQH--------LIRWCLALRPSDRPTFEE 251
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLLGC 454
+G G QG V T G VA+KK ++++ ++ E+ +L +NH+N++ LL
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 455 CL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC---YL 505
E + LV E + + L Q IH + + R++ + LC +L
Sbjct: 90 FTPQKTLEEFQDVYLVMELM-DANLCQVIHMELD--------HERMSYLLYQMLCGIKHL 140
Query: 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYF 565
HSA I HRD+K +NI++ K+ DFG +R+ + T T Y PE
Sbjct: 141 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRYYRAPEVI 195
Query: 566 RSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
+ E D++S G ++ EL+ G + TD
Sbjct: 196 LGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 227
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 44/279 (15%)
Query: 391 NFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIE---QFINEVAILSQI 443
+ +LG GG G+VY G+ +++ VAIK K ++ D + + EV +L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 444 N--HRNVVKLLGCCLETEVPLLVYEFI-PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
+ V++LL + +L+ E P L+ +I TE + E+ +V +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---TERGALQEELARSFFWQVLE 121
Query: 501 ALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
A+ + H+ + HRDIK NIL+D ++ K+ DFG S +++ D + T GT Y
Sbjct: 122 AVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY--TDFDGTRVY 175
Query: 560 LDPEYFRSSQFTEKS-DVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF 618
PE+ R ++ +S V+S G++L +++ G P E D+ ++ ++F
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEII--------RGQVF 222
Query: 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657
RV E + L + CL + RPT +E
Sbjct: 223 --FRQRVSXECQH--------LIRWCLALRPSDRPTFEE 251
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIV----AIKKSKLVDESNIEQFINEVAILSQINHR 446
+ R LG+GG Y+ + + V + KS L+ E+ E+AI +++
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
+VV G + + +V E +L + +H + + +T + + YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKA--VTEPEARYFMRQTIQGVQYLH 159
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
+ I HRD+K N+ L+D K+ DFG + + D + GT Y+ PE
Sbjct: 160 NNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYIAPEVLC 215
Query: 567 SSQFTEKSDVYSFGVVLVELLTGQKPIRST 596
+ + D++S G +L LL G+ P ++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIV----AIKKSKLVDESNIEQFINEVAILSQINHR 446
+ R LG+GG Y+ + + V + KS L+ E+ E+AI +++
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 86
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
+VV G + + +V E +L + +H + + +T + + YLH
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKA--VTEPEARYFMRQTIQGVQYLH 143
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
+ I HRD+K N+ L+D K+ DFG + + D + GT Y+ PE
Sbjct: 144 NNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLC 199
Query: 567 SSQFTEKSDVYSFGVVLVELLTGQKPIRST 596
+ + D++S G +L LL G+ P ++
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKL-VDESNIEQFINEVAI-LS 441
E+ D+ LG+G G V K + +G+I+A+K+ + V+ ++ + ++ I +
Sbjct: 46 FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 105
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNG--TLYQYIHDQTEEFPITWEIRLRIAIEVS 499
++ V G + E + Y+ + D+ + P +I +IA+ +
Sbjct: 106 TVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIP--EDILGKIAVSIV 163
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
AL +LHS S+ HRD+K +N+L++ + K+ DFG S ++D T G Y
Sbjct: 164 KALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGIS-GYLVDSVAKTIDA-GCKPY 219
Query: 560 LDPEY----FRSSQFTEKSDVYSFGVVLVEL 586
+ PE ++ KSD++S G+ ++EL
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIV----AIKKSKLVDESNIEQFINEVAILSQINHR 446
+ R LG+GG Y+ + + V + KS L+ E+ E+AI +++
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
+VV G + + +V E +L + +H + + +T + + YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKA--VTEPEARYFMRQTIQGVQYLH 159
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
+ I HRD+K N+ L+D K+ DFG + + D + GT Y+ PE
Sbjct: 160 NNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLC 215
Query: 567 SSQFTEKSDVYSFGVVLVELLTGQKPIRST 596
+ + D++S G +L LL G+ P ++
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 23/221 (10%)
Query: 389 TDNFNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ 442
T+ + LG+G V + G I+ KK D +E+ E I
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRL 66
Query: 443 INHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYI--HDQTEEFPITWEIRLRIAIEVSD 500
+ H N+V+L E L+++ + G L++ I + E + I+ ++ +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-----QILE 121
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTHLTTRVQGTF 557
A+ + H + HR++K N+LL K + K++DFG + V +Q GT
Sbjct: 122 AVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-FAGTP 177
Query: 558 GYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDS 598
GYL PE R + + D+++ GV+L LL G P D
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 37/279 (13%)
Query: 391 NFNTNRILGQGGQGT-VYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN-HRNV 448
+F +LG G +GT VY+GM N R VA+K+ + EV +L + + H NV
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDN-RDVAVKR---ILPECFSFADREVQLLRESDEHPNV 80
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
++ + + + E TL +Y+ + ++F + + + + L +LH
Sbjct: 81 IRYFCTEKDRQFQYIAIELC-AATLQEYV--EQKDFAHLGLEPITLLQQTTSGLAHLH-- 135
Query: 509 ASIPIYHRDIKSANILLD-----DKYRAKVSDFGASRSVMIDQTHLTTR--VQGTFGYLD 561
S+ I HRD+K NIL+ K +A +SDFG + + + + + R V GT G++
Sbjct: 136 -SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 562 PEYFR---SSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRL 617
PE T D++S G V +++ G P KSL + N L
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-------GKSL------QRQANIL 241
Query: 618 FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMK 656
L K E++I ++ K + M +KRP+ K
Sbjct: 242 LGACSLDCLHPEKHEDVIARELIEK-MIAMDPQKRPSAK 279
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 390 DNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
D+++ + LG G G V++ G A K ES+ E E+ +S + H +
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
V L + +++YEF+ G L++ + D+ + ++ + + +V LC++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHEN 274
Query: 509 ASIPIYHRDIKSANILLDDKY--RAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
+ H D+K NI+ K K+ DFG + +D GT + PE
Sbjct: 275 NYV---HLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPKQSVKVTTGTAEFAAPEVAE 329
Query: 567 SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+D++S GV+ LL+G P + +E
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 22/254 (8%)
Query: 377 TKLFTSM--ELEMATDNFNTNRILGQGGQGTVYKGMLTNG-RIVAIK---KSKLVDESNI 430
K FT + E+++ ++F +++G+G G V + N RI A+K K +++ +
Sbjct: 59 AKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 118
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
F E +L + + + L + LV ++ G L + ++ P E
Sbjct: 119 ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP---ED 175
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
R I + + + S + HRDIK N+LLD +++DFG+ + D T +
Sbjct: 176 MARFYI--GEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS 233
Query: 551 TRVQGTFGYLDPEYFRS-----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ GT Y+ PE ++ ++ + D +S GV + E+L G+ P + +SLV
Sbjct: 234 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA------ESLV 287
Query: 606 GYFLEAMKENRLFE 619
+ + M F+
Sbjct: 288 ETYGKIMNHEERFQ 301
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 113/254 (44%), Gaps = 22/254 (8%)
Query: 377 TKLFTSM--ELEMATDNFNTNRILGQGGQGTVYKGMLTNG-RIVAIK---KSKLVDESNI 430
K FT + E+++ ++F +++G+G G V + N RI A+K K +++ +
Sbjct: 75 AKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAET 134
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
F E +L + + + L + LV ++ G L + ++ P E
Sbjct: 135 ACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP---ED 191
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550
R I + + + S + HRDIK N+LLD +++DFG+ + D T +
Sbjct: 192 MARFYI--GEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS 249
Query: 551 TRVQGTFGYLDPEYFRS-----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ GT Y+ PE ++ ++ + D +S GV + E+L G+ P + +SLV
Sbjct: 250 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA------ESLV 303
Query: 606 GYFLEAMKENRLFE 619
+ + M F+
Sbjct: 304 ETYGKIMNHEERFQ 317
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 36/209 (17%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 453 GCCLETEVPLLVYEFIPNGTLYQ----YIHDQTEEFPITWEIRLRIAIEVSDALCY---- 504
F P +L + YI + + ++ I++ + E L Y
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 505 ----LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTG 589
PE + E D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 36/209 (17%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 453 GCCLETEVPLLVYEFIPNGTLYQ----YIHDQTEEFPITWEIRLRIAIEVSDALCY---- 504
F P +L + YI + + ++ I++ + E L Y
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 505 ----LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTG 589
PE + E D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 390 DNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV 448
D+++ + LG G G V++ G A K ES+ E E+ +S + H +
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508
V L + +++YEF+ G L++ + D+ + ++ + + +V LC++H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHEN 168
Query: 509 ASIPIYHRDIKSANILLDDKY--RAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
+ H D+K NI+ K K+ DFG + +D GT + PE
Sbjct: 169 NYV---HLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPKQSVKVTTGTAEFAAPEVAE 223
Query: 567 SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+D++S GV+ LL+G P + +E
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 257
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 165 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 224 GYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 430 IEQFINEVAILSQINHRNVVKLLGCCLETEVPLL--VYEFIPNGTLYQYIHDQTEEFPIT 487
IEQ E+AIL +++H NVVKL+ + L V+E + G + + + P++
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----PLS 135
Query: 488 WEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547
+ ++ + YLH I HRDIK +N+L+ + K++DFG S
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 548 HLTTRVQGTFGYLDPEYFRSSQ--FTEKS-DVYSFGVVLVELLTGQKP 592
L+ V GT ++ PE ++ F+ K+ DV++ GV L + GQ P
Sbjct: 193 LLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 28/223 (12%)
Query: 395 NRILGQGGQGTVYKGMLTN----GRI----VAIKKSKLVDESNIEQFINEVAILSQINHR 446
N LGQG ++KG+ G++ V +K + E F +++S+++H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
++V G C+ + +LV EF+ G+L Y+ I W +L +A +++ A+ +L
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLE 130
Query: 507 SAASIPIYHRDIKSANILL---DDKYRA-----KVSDFGASRSVMIDQTHLTTRVQGTFG 558
I H ++ + NILL +D+ K+SD G S +V+ +Q
Sbjct: 131 ENTLI---HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI-----LQERIP 182
Query: 559 YLDPEYFRSSQ-FTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
++ PE + + +D +SFG L E+ + G KP+ + DS+
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 36/207 (17%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 453 GCCLETEVPLLVYEFIPNGTLYQY--------IHDQTEEFPITWEI-RLRIAIEVSDALC 503
F P TL ++ + D I E+ R++ + LC
Sbjct: 90 NV------------FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC 137
Query: 504 ---YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELL 587
PE + E D++S G ++ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 36/209 (17%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 453 GCCLETEVPLLVYEFIPNGTLYQ----YIHDQTEEFPITWEIRLRIAIEVSDALCY---- 504
F P +L + YI + + ++ I++ + E L Y
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 505 ----LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTG 589
PE + E D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 206 GYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 152
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 153 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 212 GYTKSIDIWSVGCILAEMLSN-RPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQ--FINEVAILSQINHRNV 448
NF T L + G ++KG IV +K K+ D S + F E L +H NV
Sbjct: 13 NFLTK--LNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 449 VKLLGCCLETEVP--LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
+ +LG C P L+ ++P G+LY +H+ T F + ++ A++++ + +LH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLH 128
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTF---GYLDPE 563
+ + I + S ++++D+ A++S M D + + G ++ PE
Sbjct: 129 TLEPL-IPRHALNSRSVMIDEDMTARIS--------MAD-VKFSFQSPGRMYAPAWVAPE 178
Query: 564 YF-RSSQFTEK--SDVYSFGVVLVELLTGQKP 592
+ + T + +D++SF V+L EL+T + P
Sbjct: 179 ALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 202 GYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 27/230 (11%)
Query: 383 MELEMATDNFNTNRILGQG--GQGTVYKGMLTNGRIVAIK---KSKLVDESNIEQFINEV 437
M + +D ++ + +G G G + + LT +VA+K + +DE+ + IN
Sbjct: 13 MPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYIERGAAIDENVQREIINH- 70
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRI 494
+ H N+V+ L ++ E+ G LY+ I + +E+ E R
Sbjct: 71 ---RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSED-----EARFFF 122
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD--DKYRAKVSDFGASRSVMIDQTHLTTR 552
++ + Y HS + I HRD+K N LLD R K+ DFG S+S ++ +T
Sbjct: 123 Q-QLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 177
Query: 553 VQGTFGYLDPEYFRSSQFTEK-SDVYSFGVVLVELLTGQKPIRSTDSEED 601
GT Y+ PE ++ K +DV+S GV L +L G P + D
Sbjct: 178 -VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 24/201 (11%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
E + LV E + + L Q I + + +++ + ++ + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 143
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
SA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 567 SSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 165 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 224 GYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 204 GYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 202 GYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 147 -VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 206 GYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 209 GYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 150
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 151 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 210 GYTKSIDIWSVGCILAEMLSN-RPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 141
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 142 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 201 GYTKSIDIWSVGCILAEMLSN-RPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 398 LGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451
LG+GG ++ + G+IV KS L+ E+ E++I + H++VV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVP--KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
G + + +V E +L + +H + + E R + ++ YLH I
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLR-QIVLGCQYLHRNRVI 143
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT 571
HRD+K N+ L++ K+ DFG + V D T + GT Y+ PE +
Sbjct: 144 ---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 199
Query: 572 EKSDVYSFGVVLVELLTGQKPIRST 596
+ DV+S G ++ LL G+ P ++
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 28/223 (12%)
Query: 395 NRILGQGGQGTVYKGMLTN----GRI----VAIKKSKLVDESNIEQFINEVAILSQINHR 446
N LGQG ++KG+ G++ V +K + E F +++S+++H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 447 NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
++V G C + +LV EF+ G+L Y+ I W +L +A +++ A+ +L
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLE 130
Query: 507 SAASIPIYHRDIKSANILL---DDKYRA-----KVSDFGASRSVMIDQTHLTTRVQGTFG 558
I H ++ + NILL +D+ K+SD G S +V+ +Q
Sbjct: 131 ENTLI---HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI-----LQERIP 182
Query: 559 YLDPEYFRSSQ-FTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599
++ PE + + +D +SFG L E+ + G KP+ + DS+
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ 225
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 30/234 (12%)
Query: 380 FTSMELEMAT----DNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKK--SKLVDESNIEQ 432
F S+E+ +T + + +G G QG V T G VA+KK ++++ ++
Sbjct: 10 FYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 69
Query: 433 FINEVAILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPI 486
E+ +L +NH+N++ LL E + LV E + + L Q IH + +
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELD---- 124
Query: 487 TWEIRLRIAIEVSDALC---YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543
R++ + LC +LHSA I HRD+K +NI++ K+ DFG +R+
Sbjct: 125 ----HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 544 IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
+ + T T Y PE + D++S G ++ EL+ G + TD
Sbjct: 178 TN--FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTD 229
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 32/211 (15%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI--NHRNVVKLLGCC 455
+G+G G V+ G G VA+K +E++ + E I + H N++ +
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEAS---WFRETEIYQTVLMRHENILGFIAAD 100
Query: 456 LE-----TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS--- 507
++ T++ L+ ++ NG+LY Y+ T + + L++A LC+LH+
Sbjct: 101 IKGTGSWTQL-YLITDYHENGSLYDYLKSTTLDA----KSMLKLAYSSVSGLCHLHTEIF 155
Query: 508 --AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL----TTRVQGTFGYLD 561
I HRD+KS NIL+ ++D G + + D + TRV GT Y+
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMP 214
Query: 562 PEYFRSS------QFTEKSDVYSFGVVLVEL 586
PE S Q +D+YSFG++L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 15/220 (6%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYK-GMLTNGRIVAIKKSKL-VDESNIEQFINEVAI-LS 441
+E+ D+ LG+G G V K + +G+I+A+K+ + V+ ++ + ++ I +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 442 QINHRNVVKLLGCCLETEVPLLVYEFIPNG--TLYQYIHDQTEEFPITWEIRLRIAIEVS 499
++ V G + E + Y+ + D+ + P +I +IA+ +
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIP--EDILGKIAVSIV 119
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
AL +LHS S+ HRD+K +N+L++ + K+ DFG S ++ D G Y
Sbjct: 120 KALEHLHSKLSV--IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AGCKPY 175
Query: 560 LDPEY----FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
+ PE ++ KSD++S G+ ++EL + P S
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 36/254 (14%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM--LTNGRIVA--IKKSKLVDESNIE-----QFINEVAI 439
+ ++T LG G G V+ + N +V IKK K++++ IE + E+AI
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGT-LYQYI--HDQTEEFPITWEIRLRIAI 496
LS++ H N++K+L LV E +G L+ +I H + +E ++ R
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR----- 137
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
++ A+ YL I HRDIK NI++ + + K+ DFG+ + +++ L GT
Sbjct: 138 QLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGS--AAYLERGKLFYTFCGT 192
Query: 557 FGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTD-------------SEEDK 602
Y PE + + + +++S GV L L+ + P + S+E
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELM 252
Query: 603 SLVGYFLEAMKENR 616
SLV L+ + E R
Sbjct: 253 SLVSGLLQPVPERR 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 398 LGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451
LG+GG ++ + G+IV KS L+ E+ E++I + H++VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVP--KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
G + + +V E +L + +H + + E R + ++ YLH I
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLR-QIVLGCQYLHRNRVI 139
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT 571
HRD+K N+ L++ K+ DFG + V D T + GT Y+ PE +
Sbjct: 140 ---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 572 EKSDVYSFGVVLVELLTGQKPIRST 596
+ DV+S G ++ LL G+ P ++
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 36/209 (17%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 453 GCCLETEVPLLVYEFIPNGTLYQ----YIHDQTEEFPITWEIRLRIAIEVSDALCY---- 504
F P +L + YI + + ++ I++ + E L Y
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 505 ----LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYR 192
Query: 561 DPEYFRSSQFTEKSDVYSFGVVLVELLTG 589
PE + E D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 398 LGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451
LG+GG ++ + G+IV KS L+ E+ E++I + H++VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVP--KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
G + + +V E +L + +H + + E R + ++ YLH I
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLR-QIVLGCQYLHRNRVI 139
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT 571
HRD+K N+ L++ K+ DFG + V D T + GT Y+ PE +
Sbjct: 140 ---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 572 EKSDVYSFGVVLVELLTGQKPIRST 596
+ DV+S G ++ LL G+ P ++
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINHRNVVKLLGC 454
+G G+ V K LT G VA+K + K+ + + E+ L H +++KL
Sbjct: 26 VGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQV 84
Query: 455 CLETEVPLLVYEFIPNGTLYQYI-----HDQTEEFPITWEIRLRIAIEVSDALCYLHSAA 509
+V E++ G L+ YI D+ E R+ ++ + Y H
Sbjct: 85 ISTPSDIFMVMEYVSGGELFDYICKNGRLDEKES--------RRLFQQILSGVDYCHRHM 136
Query: 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K N+LLD AK++DFG S ++M D L G+ Y PE
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRXSC-GSPNYAAPEVISGRL 191
Query: 570 FT-EKSDVYSFGVVLVELLTGQKP 592
+ + D++S GV+L LL G P
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLP 215
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGM--LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V L R+ K S ++ ++ + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 206 GYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 26/215 (12%)
Query: 398 LGQGGQGTV--YKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCC 455
LG+GG V +G L +G A+K+ ++ + E+ E + NH N+++L+ C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 456 LE----TEVPLLVYEFIPNGTLYQYIHDQTEEFP-ITWEIRLRIAIEVSDALCYLHSAAS 510
L L+ F GTL+ I ++ +T + L + + + L +H+
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY 155
Query: 511 IPIYHRDIKSANILLDDKYRAKVSDFGA----------SRSVMIDQTHLTTRVQGTFGYL 560
HRD+K NILL D+ + + D G+ SR + Q R T Y
Sbjct: 156 A---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC--TISYR 210
Query: 561 DPEYFRSSQ---FTEKSDVYSFGVVLVELLTGQKP 592
PE F E++DV+S G VL ++ G+ P
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 453 GC-----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC---Y 504
LE + + + + L Q I + + R++ + LC +
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKH 142
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEV 197
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTG 589
+ E D++S G ++ E++ G
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVD----ESNIEQFINEVAILSQINHRNVVKLLG 453
+G+G TVYKG+ T V + +L D +S ++F E L + H N+V+
Sbjct: 34 IGRGSFKTVYKGLDTET-TVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 454 CCLET----EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLR-IAIEVSDALCYLHSA 508
T + +LV E +GTL Y+ + F + LR ++ L +LH+
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 509 ASIPIYHRDIKSANILLDDKY-RAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS 567
PI HRD+K NI + K+ D G + + + V GT + PE +
Sbjct: 149 TP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGTPEFXAPEXY-E 203
Query: 568 SQFTEKSDVYSFGVVLVELLTGQKP 592
++ E DVY+FG +E T + P
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGM--LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVK----L 451
+G+G G V + R+ K S ++ ++ + E+ IL + H NV+ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
LE + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQ----LSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASR--SVMIDQTHLTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+L++ K+ DFG +R D T T T Y PE +S+
Sbjct: 165 -VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSK 223
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 224 GYTKSIDIWSVGCILAEMLSN-RPI 247
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 453 GC-----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC---Y 504
LE + + + + L Q I + + R++ + LC +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKH 141
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEV 196
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTG 589
+ E D++S G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC--- 503
E + LV E + + L Q I + + R++ + LC
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH--------ERMSYLLYQMLCGIK 140
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
Query: 564 YFRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T T Y PE +S+
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 113/233 (48%), Gaps = 42/233 (18%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIE----QFINEVAILSQIN 444
D F R+ GQG GTV G + G VAIKK ++ + Q + ++A+L +
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKK--VIQDPRFRNRELQIMQDLAVL---H 77
Query: 445 HRNVVKL------LGCCLETEVPL-LVYEFIPNGTLYQ----YIHDQTEEFPITWEIRLR 493
H N+V+L LG ++ L +V E++P+ TL++ Y Q PI ++ L
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFL- 135
Query: 494 IAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGASRSVMIDQTHLTTR 552
++ ++ LH S+ + HRDIK N+L+++ K+ DFG+++ + + ++
Sbjct: 136 --FQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV--- 189
Query: 553 VQGTFGYLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDS 598
Y+ Y+R+ + +T D++S G + E++ G+ R +S
Sbjct: 190 -----AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 453 GC-----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC---Y 504
LE + + + + L Q I + + R++ + LC +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKH 141
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEV 196
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTG 589
+ E D++S G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 24/201 (11%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
E + LV E + + L Q I + + +++ + ++ + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 143
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
SA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 198
Query: 567 SSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 453 GC-----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC---Y 504
LE + + + + L Q I + + R++ + LC +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKH 141
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYYRAPEV 196
Query: 565 FRSSQFTEKSDVYSFGVVLVELLTG 589
+ E D++S G ++ E++ G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 24/201 (11%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
E + LV E + + L Q I + + +++ + ++ + +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY-----LLYQMLXGIKHLH 136
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
SA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 137 SAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVIL 191
Query: 567 SSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI--NHRNVVKLLGCC 455
+G+G G V++G L +G VA+K DE + + E I + + H N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 456 LETEVP----LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH----- 506
+ + L+ + +G+LY ++ QT E + LR+A+ + L +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP----HLALRLAVSAACGLAHLHVEIFG 127
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL----TTRVQGTFGYLDP 562
+ I HRD KS N+L+ + ++D G + +L RV GT Y+ P
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAP 186
Query: 563 EY---------FRSSQFTEKSDVYSFGVVLVEL 586
E F S ++T D+++FG+VL E+
Sbjct: 187 EVLDEQIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 13/205 (6%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V + +G VAIKK +S I ++ E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514
Y+F Q + + E + ++ L Y+HSA +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VV 166
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRS-SQFTE 572
HRD+K N+ +++ K+ DFG +R + T ++ TR Y PE S + +
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQ 221
Query: 573 KSDVYSFGVVLVELLTGQKPIRSTD 597
D++S G ++ E+LTG+ + D
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKD 246
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 13/205 (6%)
Query: 398 LGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V + +G VAIKK +S I ++ E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514
Y+F Q + + E + ++ L Y+HSA +
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV--- 148
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRS-SQFTE 572
HRD+K N+ +++ K+ DFG +R + T ++ TR Y PE S + +
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQ 203
Query: 573 KSDVYSFGVVLVELLTGQKPIRSTD 597
D++S G ++ E+LTG+ + D
Sbjct: 204 TVDIWSVGCIMAEMLTGKTLFKGKD 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T Y PE +S+
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 208 GYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 398 LGQGGQGTVYKGMLTNGRI-VAIKK-SKLVDESNIEQFINEVAILSQINHRNVVKL---- 451
+G+G G V ++ VAIKK S ++ ++ + E+ IL + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+E + + + + LY+ + Q ++ + ++ L Y+HSA
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRSSQ 569
+ HRD+K +N+LL+ K+ DFG +R D H T Y PE +S+
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 570 -FTEKSDVYSFGVVLVELLTGQKPI 593
+T+ D++S G +L E+L+ +PI
Sbjct: 209 GYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 398 LGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451
LG+GG ++ + G+IV KS L+ E+ E++I + H++VV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVP--KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
G + + +V E +L + +H + + E R + ++ YLH I
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLR-QIVLGCQYLHRNRVI 163
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT 571
HRD+K N+ L++ K+ DFG + V D + GT Y+ PE +
Sbjct: 164 ---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHS 219
Query: 572 EKSDVYSFGVVLVELLTGQKPIRST 596
+ DV+S G ++ LL G+ P ++
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 36/209 (17%)
Query: 396 RILGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVK 450
+ +G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++
Sbjct: 68 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 451 LLGCCLETEVPLLVYEFIPNGTLYQ----YIHDQTEEFPITWEIRL-----RIAIEVSDA 501
LL F P TL + Y+ + + + I++ R++ +
Sbjct: 126 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 502 LC---YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
LC +LHSA I HRD+K +NI++ K+ DFG +R+ + + T T
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY 228
Query: 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELL 587
Y PE + E D++S G ++ E++
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 398 LGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451
LG+GG ++ + G+IV KS L+ E+ E++I + H++VV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVP--KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
G + + +V E +L + +H + + E R + ++ YLH I
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLR-QIVLGCQYLHRNRVI 137
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT 571
HRD+K N+ L++ K+ DFG + V D + GT Y+ PE +
Sbjct: 138 ---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHS 193
Query: 572 EKSDVYSFGVVLVELLTGQKPIRST 596
+ DV+S G ++ LL G+ P ++
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 398 LGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451
LG+GG ++ + G+IV KS L+ E+ E++I + H++VV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVP--KSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
G + + +V E +L + +H + + E R + ++ YLH I
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL-TEPEARYYLR-QIVLGCQYLHRNRVI 161
Query: 512 PIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT 571
HRD+K N+ L++ K+ DFG + V D + GT Y+ PE +
Sbjct: 162 ---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHS 217
Query: 572 EKSDVYSFGVVLVELLTGQKPIRST 596
+ DV+S G ++ LL G+ P ++
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 24/185 (12%)
Query: 485 PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544
PIT E + + +V+ + +L S I HRD+ + NILL + K+ DFG +R +
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSRKCI---HRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 545 DQTHLT---TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600
+ ++ TR+ ++ PE ++ KSDV+S+GV+L E+ + G P +E
Sbjct: 252 NPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE 309
Query: 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660
D +RL E + R A E + + C + K+RP E
Sbjct: 310 DFC-----------SRLREGMRMR----APEYSTPEIYQIMLDCWHRDPKERPRFAELVE 354
Query: 661 ELGGI 665
+LG +
Sbjct: 355 KLGDL 359
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 380 FTSMELEMATDNFNTNRILGQGGQGTVYKGML------TNGRIVAIKKSKL-VDESNIEQ 432
+ + + E A + + LG+G G V + R VA+K K S +
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 433 FINEVAILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGTLYQYIHDQTEEF 484
+ E+ IL+ I H NVV LLG C + PL+V E+ G L Y+ + + F
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLF 130
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 394 TNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN-HRNVVKL 451
T+ +LG+G V + L NG+ A+K + + + EV L Q ++N+++L
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASI 511
+ + LV+E + G++ +I Q R+ +V+ AL +LH+
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKH---FNEREASRVVRDVAAALDFLHTKG-- 131
Query: 512 PIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQT-------HLTTRVQGTFGYLD 561
I HRD+K NIL + + K+ DF + ++ + LTT G+ Y+
Sbjct: 132 -IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC-GSAEYMA 189
Query: 562 PEYF-----RSSQFTEKSDVYSFGVVLVELLTGQKPI 593
PE +++ + ++ D++S GVVL +L+G P
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-----------LTNGRIVAIKKSKLVDES-NIEQFINEV 437
D + ++ LG G G V + + R AI ++ D + N+E E+
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 72
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIE 497
IL ++NH ++K+ + E +V E + G L+ + T ++ +
Sbjct: 73 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQ 128
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQ 554
+ A+ YLH I HRD+K N+LL + K++DFG S+ ++ +T L +
Sbjct: 129 MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLC 183
Query: 555 GTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKP 592
GT YL PE S + + D +S GV+L L+G P
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 380 FTSMELEMAT----DNFNTNRILGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNI 430
F S+E+ +T + + +G G QG V Y +L R VAIKK ++++
Sbjct: 12 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 69
Query: 431 EQFINEVAILSQINHRNVVKLLGC-----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFP 485
++ E+ ++ +NH+N++ LL LE + + + + L Q I + +
Sbjct: 70 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--- 126
Query: 486 ITWEIRLRIAIEVSDALC---YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
R++ + LC +LHSA I HRD+K +NI++ K+ DFG +R+
Sbjct: 127 -----HERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA 178
Query: 543 MIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTG 589
+ + T Y PE + E D++S G ++ E++ G
Sbjct: 179 --GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-----------LTNGRIVAIKKSKLVDES-NIEQFINEV 437
D + ++ LG G G V + + R AI ++ D + N+E E+
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE---TEI 205
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIE 497
IL ++NH ++K+ + E +V E + G L+ + T ++ +
Sbjct: 206 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQ 261
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQ 554
+ A+ YLH I HRD+K N+LL + K++DFG S+ ++ +T L +
Sbjct: 262 MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLC 316
Query: 555 GTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKP 592
GT YL PE S + + D +S GV+L L+G P
Sbjct: 317 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-----------LTNGRIVAIKKSKLVDES-NIEQFINEV 437
D + ++ LG G G V + + R AI ++ D + N+E E+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 66
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIE 497
IL ++NH ++K+ + E +V E + G L+ + T ++ +
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQ 122
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQ 554
+ A+ YLH I HRD+K N+LL + K++DFG S+ ++ +T L +
Sbjct: 123 MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLC 177
Query: 555 GTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKP 592
GT YL PE S + + D +S GV+L L+G P
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 385 LEMATDN------FNTNRILGQGGQGTVYK------GMLTNGRIVAIKKSKLVDESNIEQ 432
L+MA D+ + ++G+G V + G +IV + K + E
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED 72
Query: 433 FINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL-YQYIHDQTEEFPITWEIR 491
E +I + H ++V+LL + +V+EF+ L ++ + F + +
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 492 LRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRA---KVSDFGASRSVMIDQTH 548
++ +AL Y H I HRD+K N+LL K + K+ DFG + + + ++
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESG 187
Query: 549 LTT--RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRST 596
L RV GT ++ PE + + + DV+ GV+L LL+G P T
Sbjct: 188 LVAGGRV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-----------LTNGRIVAIKKSKLVDES-NIEQFINEV 437
D + ++ LG G G V + + R AI ++ D + N+E E+
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE---TEI 191
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIE 497
IL ++NH ++K+ + E +V E + G L+ + T ++ +
Sbjct: 192 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQ 247
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQ 554
+ A+ YLH I HRD+K N+LL + K++DFG S+ ++ +T L +
Sbjct: 248 MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLC 302
Query: 555 GTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKPI 593
GT YL PE S + + D +S GV+L L+G P
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 396 RILGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVK 450
+ +G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++
Sbjct: 68 KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 451 LLGCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC- 503
LL E + LV E + + L Q I + + R++ + LC
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELD--------HERMSYLLYQMLCG 176
Query: 504 --YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLD 561
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y
Sbjct: 177 IKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRA 231
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELL 587
PE + E D++S G ++ E++
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-----------LTNGRIVAIKKSKLVDES-NIEQFINEV 437
D + ++ LG G G V + + R AI ++ D + N+E E+
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 65
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIE 497
IL ++NH ++K+ + E +V E + G L+ + T ++ +
Sbjct: 66 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQ 121
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQ 554
+ A+ YLH I HRD+K N+LL + K++DFG S+ ++ +T L +
Sbjct: 122 MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLC 176
Query: 555 GTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKP 592
GT YL PE S + + D +S GV+L L+G P
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-----------LTNGRIVAIKKSKLVDES-NIEQFINEV 437
D + ++ LG G G V + + R AI ++ D + N+E E+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 66
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIE 497
IL ++NH ++K+ + E +V E + G L+ + T ++ +
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQ 122
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQ 554
+ A+ YLH I HRD+K N+LL + K++DFG S+ ++ +T L +
Sbjct: 123 MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLC 177
Query: 555 GTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKP 592
GT YL PE S + + D +S GV+L L+G P
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH-RN 447
D++ R LG+G V++ + +TN V +K K V ++ I++ E+ IL + N
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPN 93
Query: 448 VVKLLGCCLE--TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
++ L + + P LV+E + N Q T+ ++IR + E+ AL Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTD-----YDIRFYM-YEILKALDYC 147
Query: 506 HSAASIPIYHRDIKSANILLDDKYRA-KVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
HS I HRD+K N+++D ++R ++ D+G + Q + RV + + PE
Sbjct: 148 HSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPEL 202
Query: 565 FRSSQFTEKS-DVYSFGVVLVELLTGQKPI 593
Q + S D++S G +L ++ ++P
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-----------LTNGRIVAIKKSKLVDES-NIEQFINEV 437
D + ++ LG G G V + + R AI ++ D + N+E E+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE---TEI 66
Query: 438 AILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIE 497
IL ++NH ++K+ + E +V E + G L+ + T ++ +
Sbjct: 67 EILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF---YQ 122
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQ 554
+ A+ YLH I HRD+K N+LL + K++DFG S+ ++ +T L +
Sbjct: 123 MLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSK--ILGETSLMRTLC 177
Query: 555 GTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKP 592
GT YL PE S + + D +S GV+L L+G P
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC--- 503
E + LV E + + L Q I + + R++ + LC
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH--------ERMSYLLYQMLCGIK 133
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 188
Query: 564 YFRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC--- 503
E + LV E + + L Q I + + R++ + LC
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH--------ERMSYLLYQMLCGIK 134
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 189
Query: 564 YFRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMV 213
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC--- 503
E + LV E + + L Q I + + R++ + LC
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH--------ERMSYLLYQMLCGIK 134
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 189
Query: 564 YFRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 190 VILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC--- 503
E + LV E + + L Q I + + R++ + LC
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH--------ERMSYLLYQMLCGIK 141
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 196
Query: 564 YFRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC--- 503
E + LV E + + L Q I + + R++ + LC
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH--------ERMSYLLYQMLCGIK 139
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 140 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 194
Query: 564 YFRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 195 VILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC--- 503
E + LV E + + L Q I + + R++ + LC
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH--------ERMSYLLYQMLCGIK 140
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
Query: 564 YFRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC--- 503
E + LV E + + L Q I + + R++ + LC
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH--------ERMSYLLYQMLCGIK 141
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 142 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 196
Query: 564 YFRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 30/204 (14%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 453 GCCL------ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC--- 503
E + LV E + + L Q I + + R++ + LC
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDH--------ERMSYLLYQMLCGIK 140
Query: 504 YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
+LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPE 195
Query: 564 YFRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 492 LRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID---QTH 548
L I I++++A+ +LHS + HRD+K +NI KV DFG ++ D QT
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 549 LTTRVQ--------GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELL 587
LT GT Y+ PE + ++ K D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 29/227 (12%)
Query: 389 TDNFNTNRILGQG--GQGTVYKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQI 443
+D + + +G G G + + +N +VA+K + + +DE+ + IN +
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIDENVKREIINH----RSL 71
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVSD 500
H N+V+ L +V E+ G L++ I + +E+ E R +S
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARFFFQQLIS- 125
Query: 501 ALCYLHSAASIPIYHRDIKSANILLD--DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+ Y H+ + + HRD+K N LLD R K+ DFG S+S ++ +T GT
Sbjct: 126 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPA 180
Query: 559 YLDPEYFRSSQFTEK-SDVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
Y+ PE ++ K +DV+S GV L +L G P D EE K+
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNF 225
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIE-QFINEVAILSQINHR 446
+ +F +LG+G G V G IVAIKK + D+ + + E+ IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 447 NVVKLLGC----CLETEVPLLVYEFIPNGTLY-----QYIHDQTEEFPITWEIRLRIAIE 497
N++ + E + + + + L+ Q + D ++ I +R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR------ 123
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV---MIDQTHLTTRVQ 554
A+ LH + I HRD+K +N+L++ KV DFG +R + D + T +
Sbjct: 124 ---AVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 555 GTFGYLDPEYFR-------SSQFTEKSDVYSFGVVLVELLTGQKPI 593
G Y+ ++R S++++ DV+S G +L EL ++PI
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 39/237 (16%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKK-----------SKLVDESNIEQ 432
EL + R + G G V G+ + G VAIK+ + L D ++
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 433 FINEVAILSQINHRNVVKLLGCCLETEVP-----LLVYEFIPNGTLYQYIHDQTEEFPIT 487
+ E+ +L+ +H N++ L + E P LV E + L Q IHDQ
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQ------- 127
Query: 488 WEIRLRIAIEVSDALCY-----LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
R+ I+ + Y LH + HRD+ NILL D + DF +R
Sbjct: 128 ---RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED 184
Query: 543 MID--QTHLTTRVQGTFGYLDPEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRST 596
D +TH T Y PE + FT+ D++S G V+ E+ + R +
Sbjct: 185 TADANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 39/237 (16%)
Query: 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKK-----------SKLVDESNIEQ 432
EL + R + G G V G+ + G VAIK+ + L D ++
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 433 FINEVAILSQINHRNVVKLLGCCLETEVP-----LLVYEFIPNGTLYQYIHDQTEEFPIT 487
+ E+ +L+ +H N++ L + E P LV E + L Q IHDQ
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQ------- 127
Query: 488 WEIRLRIAIEVSDALCY-----LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542
R+ I+ + Y LH + HRD+ NILL D + DF +R
Sbjct: 128 ---RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED 184
Query: 543 MID--QTHLTTRVQGTFGYLDPEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRST 596
D +TH T Y PE + FT+ D++S G V+ E+ + R +
Sbjct: 185 TADANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 37/250 (14%)
Query: 394 TNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLL 452
+ +ILG G GTV GR VA+K+ L+D +I + E+ +L++ +H NV++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKR-MLIDFCDIA--LMEIKLLTESDDHPNVIRYY 75
Query: 453 GCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIR-LRIAIEVSDALCYLHSA 508
C T+ L + + N L + + E + E + + +++ + +LH
Sbjct: 76 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 132
Query: 509 ASIPIYHRDIKSANILLD-------------DKYRAKVSDFGASRSVMIDQTHLTTRV-- 553
S+ I HRD+K NIL+ + R +SDFG + + Q+ T +
Sbjct: 133 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 554 -QGTFGYLDPEYFRSS-------QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSL 604
GT G+ PE S + T D++S G V +L+ G+ P S E +
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
Query: 605 VGYF-LEAMK 613
G F L+ MK
Sbjct: 252 RGIFSLDEMK 261
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 40/229 (17%)
Query: 380 FTSMELEMAT----DNFNTNRILGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNI 430
F S+E+ +T + + +G G QG V Y +L R VAIKK ++++
Sbjct: 15 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHA 72
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQ----YIHDQTEEFPI 486
++ E+ ++ +NH+N++ LL F P +L + YI + + +
Sbjct: 73 KRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANL 120
Query: 487 TWEIRL-----RIAIEVSDALC---YLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGA 538
I++ R++ + LC +LHSA I HRD+K +NI++ K+ DFG
Sbjct: 121 CQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 177
Query: 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELL 587
+R+ + + T T Y PE + E D++S G ++ E++
Sbjct: 178 ARTA--GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 12/174 (6%)
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL Q+ H NV+ L +L+ E + G L+ ++ ++ ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEE 116
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMIDQ 546
++ D + YLH+ I H D+K NI+L DK K+ DFG + + D
Sbjct: 117 ATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DG 172
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 173 VEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 380 FTSMELEMATDNFN-----TNRILGQGGQGTVYKGM-LTNGRIVAIK--KSKLVDESNIE 431
F SME NFN T++ LG+G V + + + G+ A K K + +
Sbjct: 20 FQSME------NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA 73
Query: 432 QFINEVAILSQINH-RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
+ ++E+A+L V+ L T +L+ E+ G ++ + E ++
Sbjct: 74 EILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEM-VSEND 132
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY---RAKVSDFGASRSVMIDQT 547
+R+ ++ + + YLH I H D+K NILL Y K+ DFG SR I
Sbjct: 133 VIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK--IGHA 187
Query: 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ GT YL PE T +D+++ G++ LLT P D++E
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL Q+ H NV+ L +L+ E + G L+ ++ + ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEE 116
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMIDQ 546
++ D + YLH+ I H D+K NI+L DK K+ DFG + + D
Sbjct: 117 ATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DG 172
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 173 VEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL Q+ H NV+ L +L+ E + G L+ ++ + ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEE 116
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMIDQ 546
++ D + YLH+ I H D+K NI+L DK K+ DFG + + D
Sbjct: 117 ATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DG 172
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 173 VEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL Q+ H NV+ L +L+ E + G L+ ++ + ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEE 116
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMIDQ 546
++ D + YLH+ I H D+K NI+L DK K+ DFG + + D
Sbjct: 117 ATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DG 172
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 173 VEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 28/203 (13%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 453 GC-----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC---Y 504
LE + + + + L Q I + + R++ + LC +
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKH 135
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
LHSA I HRD+K +NI++ K+ DFG +R+ + + T T Y PE
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEV 190
Query: 565 FRSSQFTEKSDVYSFGVVLVELL 587
+ E D++S G ++ E++
Sbjct: 191 ILGMGYKENVDLWSVGCIMGEMV 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL Q+ H NV+ L +L+ E + G L+ ++ + ++ E
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEE 116
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMIDQ 546
++ D + YLH+ I H D+K NI+L DK K+ DFG + + D
Sbjct: 117 ATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DG 172
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+ GT ++ PE ++D++S GV+ LL+G P +E
Sbjct: 173 VEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIE-QFINEVAILSQINHR 446
+ +F +LG+G G V G IVAIKK + D+ + + E+ IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 447 NVVKLLGC----CLETEVPLLVYEFIPNGTLY-----QYIHDQTEEFPITWEIRLRIAIE 497
N++ + E + + + + L+ Q + D ++ I +R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR------ 123
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV---MIDQTHLTTRVQ 554
A+ LH + I HRD+K +N+L++ KV DFG +R + D + T +
Sbjct: 124 ---AVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 555 GTFGYLDPEYFR-------SSQFTEKSDVYSFGVVLVELLTGQKPI 593
G ++ ++R S++++ DV+S G +L EL ++PI
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 389 TDNFNTNRILGQG--GQGTVYKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQI 443
+D + + +G G G + + N +VA+K + + +DE+ + IN +
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQAN-ELVAVKYIERGEKIDENVKREIINH----RSL 72
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVSD 500
H N+V+ L +V E+ G L++ I + +E+ E R +S
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARFFFQQLIS- 126
Query: 501 ALCYLHSAASIPIYHRDIKSANILLD--DKYRAKVSDFGASR-SVMIDQTHLTTRVQGTF 557
+ Y H+ + + HRD+K N LLD R K++DFG S+ SV+ Q GT
Sbjct: 127 GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV---GTP 180
Query: 558 GYLDPEYFRSSQFTEK-SDVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
Y+ PE ++ K +DV+S GV L +L G P D EE K+
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNF 226
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 453 GC-----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC---Y 504
LE + + + + L Q I + + R++ + LC +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKH 141
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV---MIDQTHLTTRVQGTFGYLD 561
LHSA I HRD+K +NI++ K+ DFG +R+ + + + TR Y
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-----YRA 193
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELL 587
PE + E D++S G ++ E++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 160
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 218
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 219 LGVIMYILLCGYPPFYS 235
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 160
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 161 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 207
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 136
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 137 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 183
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 159
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 160 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 206
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 145
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 146 IHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYVATRW 192
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 147
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 148 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT----------GYVATRW 194
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 33/246 (13%)
Query: 394 TNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLL 452
+ +ILG G GTV GR VA+K+ L+D +I + E+ +L++ +H NV++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIA--LMEIKLLTESDDHPNVIRYY 93
Query: 453 GCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIR-LRIAIEVSDALCYLHSA 508
C T+ L + + N L + + E + E + + +++ + +LH
Sbjct: 94 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 150
Query: 509 ASIPIYHRDIKSANILLD-------------DKYRAKVSDFGASRSVMIDQTHLTTRV-- 553
S+ I HRD+K NIL+ + R +SDFG + + Q +
Sbjct: 151 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 554 -QGTFGYLDPEYFRSS---QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYF 608
GT G+ PE S + T D++S G V +L+ G+ P S E + G F
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF 269
Query: 609 -LEAMK 613
L+ MK
Sbjct: 270 SLDEMK 275
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 147
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 148 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT----------GYVATRW 194
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 33/246 (13%)
Query: 394 TNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLL 452
+ +ILG G GTV GR VA+K+ L+D +I + E+ +L++ +H NV++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIA--LMEIKLLTESDDHPNVIRYY 93
Query: 453 GCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIR-LRIAIEVSDALCYLHSA 508
C T+ L + + N L + + E + E + + +++ + +LH
Sbjct: 94 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 150
Query: 509 ASIPIYHRDIKSANILLD-------------DKYRAKVSDFGASRSVMIDQTHLTTRV-- 553
S+ I HRD+K NIL+ + R +SDFG + + Q +
Sbjct: 151 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 554 -QGTFGYLDPEYFRSS---QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYF 608
GT G+ PE S + T D++S G V +L+ G+ P S E + G F
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF 269
Query: 609 -LEAMK 613
L+ MK
Sbjct: 270 SLDEMK 275
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 147
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 148 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT----------GYVATRW 194
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 146
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 147 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 193
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 151
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 152 IHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYVATRW 198
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 152
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 210
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 211 LGVIMYILLCGYPPFYS 227
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 150
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 151 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 197
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 245
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 202
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 203 LGVIMYILLCGYPPFYS 219
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 151
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 209
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 210 LGVIMYILLCGYPPFYS 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQ--FINEVAILSQINHRNV 448
NF T L + G ++KG IV +K K+ D S + F E L +H NV
Sbjct: 13 NFLTK--LNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV 69
Query: 449 VKLLGCCLETEVP--LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
+ +LG C P L+ + P G+LY +H+ T F + ++ A++ + +LH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGT-NFVVDQSQAVKFALDXARGXAFLH 128
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYF- 565
+ + I + S ++ +D+ A++S S ++ PE
Sbjct: 129 TLEPL-IPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAP------AWVAPEALQ 181
Query: 566 RSSQFTEK--SDVYSFGVVLVELLTGQKP 592
+ + T + +D +SF V+L EL+T + P
Sbjct: 182 KKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 431 EQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEI 490
E+ EV+IL Q+ H N++ L +L+ E + G L+ ++ ++ ++ E
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEE 116
Query: 491 RLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMIDQ 546
++ D + YLH+ I H D+K NI+L DK K+ DFG + + D
Sbjct: 117 ATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DG 172
Query: 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592
+ GT ++ PE ++D++S GV+ LL+G P
Sbjct: 173 VEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 145
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 203
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 204 LGVIMYILLCGYPPFYS 220
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 196
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 254
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 255 LGVIMYILLCGYPPFYS 271
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 150
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 208
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 209 LGVIMYILLCGYPPFYS 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 398 LGQGGQGTV---YKGMLTNGRIVAIKK--SKLVDESNIEQFINEVAILSQINHRNVVKLL 452
+G G QG V Y +L R VAIKK ++++ ++ E+ ++ +NH+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 453 GC-----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC---Y 504
LE + + + + L Q I + + R++ + LC +
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD--------HERMSYLLYQMLCGIKH 141
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV---MIDQTHLTTRVQGTFGYLD 561
LHSA I HRD+K +NI++ K+ DFG +R+ + + + TR Y
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRY-----YRA 193
Query: 562 PEYFRSSQFTEKSDVYSFGVVLVELL 587
PE + E D++S G ++ E++
Sbjct: 194 PEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 248
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 249 LGVIMYILLCGYPPFYS 265
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 145
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 146 IHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT----------GYVATRW 192
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 205 LGVIMYILLCGYPPFYS 221
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 142
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 143 IHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT----------GYVATRW 189
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 138
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 139 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 185
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 233
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 146
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWS 204
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 205 LGVIMYILLCGYPPFYS 221
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 146
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 147 IHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT----------GYVATRW 193
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 136
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 137 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 183
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 137
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 138 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 184
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 152
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 153 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 199
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 152
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 153 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 199
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 145
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 146 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 192
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 137
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 138 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 184
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 142
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 143 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 189
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 160
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 161 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 207
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 163
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 164 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 210
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 142
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 143 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 189
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 142
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 143 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 189
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 237
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 159
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 160 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 206
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 254
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 32/223 (14%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPE 563
+HSA I HRD+K +N+ +++ K+ DFG +R + T ++ TR Y PE
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPE 192
Query: 564 -YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ + + D++S G ++ ELLTG+ TD + L+
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 152
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 153 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 199
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 247
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 145
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 146 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 192
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 240
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 146
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 147 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 193
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 139
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 140 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 186
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 234
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 397 ILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN-HRNVVKLLGC 454
+LG+G V + L + A+K + + EV +L Q HRNV++L+
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514
E + LV+E + G++ +IH + + + + +V+ AL +LH+ I
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IA 133
Query: 515 HRDIKSANILLDDKYR---AKVSDFGASRSVM-------IDQTHLTTRVQGTFGYLDPEY 564
HRD+K NIL + + K+ DFG + I L T G+ Y+ PE
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC-GSAEYMAPEV 192
Query: 565 F-----RSSQFTEKSDVYSFGVVLVELLTGQKP 592
+S + ++ D++S GV+L LL+G P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 151
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 152 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 198
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 146
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 147 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 193
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 241
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 147
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 148 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 194
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 16/217 (7%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIK---KSKLVDESNIEQFINEVAILSQINH 445
D ++ LG G G V++ + GR+ K +D+ ++ NE++I++Q++H
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK---NEISIMNQLHH 107
Query: 446 RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505
++ L + +L+ EF+ G L+ I E++ ++ + + + L ++
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 506 HSAASIPIYHRDIKSANILLDDKYRA--KVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE 563
H + I H DIK NI+ + K + K+ DFG + + D+ T F PE
Sbjct: 166 HEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA--APE 220
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600
+D+++ GV+ LL+G P D E
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 257
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 37/250 (14%)
Query: 394 TNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLL 452
+ +ILG G GTV GR VA+K+ L+D +I + E+ +L++ +H NV++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRM-LIDFCDIA--LMEIKLLTESDDHPNVIRYY 75
Query: 453 GCCLETEVPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIR-LRIAIEVSDALCYLHSA 508
C T+ L + + N L + + E + E + + +++ + +LH
Sbjct: 76 -CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 132
Query: 509 ASIPIYHRDIKSANILLD-------------DKYRAKVSDFGASRSVMIDQTHLTTRV-- 553
S+ I HRD+K NIL+ + R +SDFG + + Q +
Sbjct: 133 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 554 -QGTFGYLDPEYFRSS-------QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSL 604
GT G+ PE S + T D++S G V +L+ G+ P S E +
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
Query: 605 VGYF-LEAMK 613
G F L+ MK
Sbjct: 252 RGIFSLDEMK 261
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 15/220 (6%)
Query: 385 LEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKL-VDESNIEQFINEVAILSQ 442
E+ D+ LG+G G V K + +G+I A+K+ + V+ ++ + ++ I +
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXR 88
Query: 443 -INHRNVVKLLGCCLETEVPLLVYEFIPNG--TLYQYIHDQTEEFPITWEIRLRIAIEVS 499
++ V G + E Y+ + D+ + P +I +IA+ +
Sbjct: 89 TVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIP--EDILGKIAVSIV 146
Query: 500 DALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559
AL +LHS S+ HRD+K +N+L++ + K DFG S ++ D G Y
Sbjct: 147 KALEHLHSKLSV--IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID--AGCKPY 202
Query: 560 LDPEY----FRSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595
PE ++ KSD++S G+ +EL + P S
Sbjct: 203 XAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS 242
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 34/226 (15%)
Query: 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIE-QFINEVAILSQINHR 446
+ +F +LG+G G V G IVAIKK + D+ + + E+ IL H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 447 NVVKLLGC----CLETEVPLLVYEFIPNGTLY-----QYIHDQTEEFPITWEIRLRIAIE 497
N++ + E + + + + L+ Q + D ++ I +R
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR------ 123
Query: 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV---MIDQTHLTTRVQ 554
A+ LH + I HRD+K +N+L++ KV DFG +R + D + T +
Sbjct: 124 ---AVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 555 G------TFGYLDPE-YFRSSQFTEKSDVYSFGVVLVELLTGQKPI 593
G T Y PE S++++ DV+S G +L EL ++PI
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 389 TDNFNTNRILGQG--GQGTVYKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQI 443
+D + + +G G G + + +N +VA+K + + +DE+ + IN +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIDENVKREIINH----RSL 72
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVSD 500
H N+V+ L +V E+ G L++ I + +E+ E R +S
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARFFFQQLIS- 126
Query: 501 ALCYLHSAASIPIYHRDIKSANILLD--DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+ Y H+ + + HRD+K N LLD R K+ FG S+S ++ +T GT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPA 181
Query: 559 YLDPEYFRSSQFTEK-SDVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
Y+ PE ++ K +DV+S GV L +L G P D EE K+
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNF 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 136
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
+HSA I HRD+K +N+ +++ K+ DFG +R H + G T Y
Sbjct: 137 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRA 186
Query: 562 PE-YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
PE + + D++S G ++ ELLTG+ TD + L+
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 160
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
+HSA I HRD+K +N+ +++ K+ DFG +R H + G T Y
Sbjct: 161 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRA 210
Query: 562 PE-YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
PE + + D++S G ++ ELLTG+ TD + L+
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPE- 563
+HSA I HRD+K +N+ +++ K+ DFG +R +T V T Y PE
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGXV-ATRWYRAPEI 193
Query: 564 YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+ + D++S G ++ ELLTG+ TD + L+
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
+HSA I HRD+K +N+ +++ K+ DFG +R H + G T Y
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRA 190
Query: 562 PE-YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
PE + + D++S G ++ ELLTG+ TD + L+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG---TFGYLD 561
+HSA I HRD+K +N+ +++ K+ DFG +R H + G T Y
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRA 190
Query: 562 PE-YFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
PE + + D++S G ++ ELLTG+ TD + L+
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 455 -----CLETEVPLLVYEFIPNGTLYQYIH-----DQTEEFPITWEIRLRIAIEVSDALCY 504
LE + + + L + D +F I +R L Y
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILR---------GLKY 136
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R + T GY+ +
Sbjct: 137 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------GYVATRW 183
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 231
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPE 144
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LT + Y+ PE ++ + D++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKET-TSHNSLTEPCYTPY-YVAPEVLGPEKYDKSCDMWS 202
Query: 579 FGVVLVELLTGQKPIRS 595
GV++ LL G P S
Sbjct: 203 LGVIMYILLCGYPPFYS 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 390 DNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHR 446
+ + T +G G G+V + +G +A+KK +S I ++ E+ +L + H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 447 NVVKLL-----GCCLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAI 496
NV+ LL LE +V L+ + + N Q + D +F I +R
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR----- 165
Query: 497 EVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGT 556
L Y+HSA I HRD+K +N+ +++ K+ DFG +R + T
Sbjct: 166 ----GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 209
Query: 557 FGYLDPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTD 597
GY+ ++R+ + + D++S G ++ ELLTG+ TD
Sbjct: 210 -GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTD 256
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 443 INHR-----NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRI 494
INHR N+V+ L +V E+ G L++ I + +E+ E R
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARFFF 121
Query: 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLD--DKYRAKVSDFGASRSVMIDQTHLTTR 552
+S + Y H+ + + HRD+K N LLD R K+ DFG S+S ++ +T
Sbjct: 122 QQLIS-GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 176
Query: 553 VQGTFGYLDPEYFRSSQFTEK-SDVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
GT Y+ PE ++ K +DV+S GV L +L G P D EE K+
Sbjct: 177 -VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNF 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ D+G +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 389 TDNFNTNRILGQG--GQGTVYKGMLTNGRIVAIK---KSKLVDESNIEQFINEVAILSQI 443
+D + + +G G G + + +N +VA+K + + +DE+ + IN +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIDENVKREIINH----RSL 72
Query: 444 NHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQ---TEEFPITWEIRLRIAIEVSD 500
H N+V+ L +V E+ G L++ I + +E+ E R +S
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED-----EARFFFQQLIS- 126
Query: 501 ALCYLHSAASIPIYHRDIKSANILLD--DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFG 558
+ Y H+ + + HRD+K N LLD R K+ FG S+S ++ T GT
Sbjct: 127 GVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT--VGTPA 181
Query: 559 YLDPEYFRSSQFTEK-SDVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604
Y+ PE ++ K +DV+S GV L +L G P D EE K+
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFE--DPEEPKNF 226
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 398 LGQGGQGTVYKGMLTNGRI---VAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLL 452
+G G G V + +GR VAIKK +S + ++ E+ +L + H NV+ LL
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 453 GCCLETEVP------LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH 506
E LV F+ H++ E I + + ++ L Y+H
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRYIH 145
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR 566
+A I HRD+K N+ +++ K+ DFG +R + T Y PE
Sbjct: 146 AAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVIL 198
Query: 567 S-SQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597
+ ++T+ D++S G ++ E++TG+ + +D
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 396 RILGQGGQGTV---YKGMLTNGRIVAIKKSKLVDESNIE--QFINEVAILSQINHRNVVK 450
R +G G G+V Y L VA+KK +S I + E+ +L + H NV+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 451 LL-----GCCLE--TEVPL---LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
LL +E +EV L L+ + N Q + D+ +F + +R
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR--------- 142
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
L Y+HSA I HRD+K +N+ +++ ++ DFG +R + T GY+
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT----------GYV 189
Query: 561 DPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTD 597
++R+ + + + D++S G ++ ELL G+ +D
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 233
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 163
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DFG +R H + GY+ +
Sbjct: 164 IHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMX---GYVATRW 210
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 258
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521
L+V E + G L+ I D+ ++ T I + +A+ YLHS I I HRD+K
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQ-AFTEREASEIXKSIGEAIQYLHS---INIAHRDVKPE 190
Query: 522 NILLDDKYR---AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYS 578
N+L K K++DFG ++ LTT + Y+ PE ++ + D +S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWS 248
Query: 579 FGVVLVELLTGQKPIRS 595
GV+ LL G P S
Sbjct: 249 LGVIXYILLCGYPPFYS 265
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 38/214 (17%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI--NHRNVVKLLGC- 454
+G+G G V++G G VA+K +E + + E I + H N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAAD 72
Query: 455 ----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH---- 506
T++ LV ++ +G+L+ Y++ + +T E +++A+ + L +LH
Sbjct: 73 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 507 -SAASIPIYHRDIKSANILLDDKYRAKVSDFG-------ASRSVMIDQTHLTTRVQGTFG 558
+ I HRD+KS NIL+ ++D G A+ ++ I H RV GT
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH---RV-GTKR 183
Query: 559 YLDPEYFRSS------QFTEKSDVYSFGVVLVEL 586
Y+ PE S + +++D+Y+ G+V E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 38/214 (17%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI--NHRNVVKLLGC- 454
+G+G G V++G G VA+K +E + + E I + H N++ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAAD 67
Query: 455 ----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH---- 506
T++ LV ++ +G+L+ Y++ + +T E +++A+ + L +LH
Sbjct: 68 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 507 -SAASIPIYHRDIKSANILLDDKYRAKVSDFG-------ASRSVMIDQTHLTTRVQGTFG 558
+ I HRD+KS NIL+ ++D G A+ ++ I H RV GT
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH---RV-GTKR 178
Query: 559 YLDPEYFRSS------QFTEKSDVYSFGVVLVEL 586
Y+ PE S + +++D+Y+ G+V E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 38/214 (17%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI--NHRNVVKLLGC- 454
+G+G G V++G G VA+K +E + + E I + H N++ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAAD 92
Query: 455 ----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH---- 506
T++ LV ++ +G+L+ Y++ + +T E +++A+ + L +LH
Sbjct: 93 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 147
Query: 507 -SAASIPIYHRDIKSANILLDDKYRAKVSDFG-------ASRSVMIDQTHLTTRVQGTFG 558
+ I HRD+KS NIL+ ++D G A+ ++ I H RV GT
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH---RV-GTKR 203
Query: 559 YLDPEYFRSS------QFTEKSDVYSFGVVLVEL 586
Y+ PE S + +++D+Y+ G+V E+
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 38/214 (17%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI--NHRNVVKLLGC- 454
+G+G G V++G G VA+K +E + + E I + H N++ +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAAD 105
Query: 455 ----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH---- 506
T++ LV ++ +G+L+ Y++ + +T E +++A+ + L +LH
Sbjct: 106 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 160
Query: 507 -SAASIPIYHRDIKSANILLDDKYRAKVSDFG-------ASRSVMIDQTHLTTRVQGTFG 558
+ I HRD+KS NIL+ ++D G A+ ++ I H RV GT
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH---RV-GTKR 216
Query: 559 YLDPEYFRSS------QFTEKSDVYSFGVVLVEL 586
Y+ PE S + +++D+Y+ G+V E+
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 23/240 (9%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFI-NEVAILSQINHRNVVKLLGCCL 456
+G+G G VYK +G+ K ++ + I E+A+L ++ H NV+ L L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 457 E--TEVPLLVYEFIPNGTLYQYIH----DQTEEFPITWEIRL--RIAIEVSDALCYLHSA 508
L++++ + L+ I + + P+ + + ++ D + YLH+
Sbjct: 89 SHADRKVWLLFDYAEHD-LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 509 ASIPIYHRDIKSANILL----DDKYRAKVSDFGASRSVMIDQTHLT--TRVQGTFGYLDP 562
+ HRD+K ANIL+ ++ R K++D G +R L V TF Y P
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 563 EYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621
E ++ +T+ D+++ G + ELLT + PI E+ K+ Y + + +R+F V+
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQEDIKTSNPYHHDQL--DRIFNVM 261
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 38/214 (17%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI--NHRNVVKLLGC- 454
+G+G G V++G G VA+K +E + + E I + H N++ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAAD 69
Query: 455 ----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH---- 506
T++ LV ++ +G+L+ Y++ + +T E +++A+ + L +LH
Sbjct: 70 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 507 -SAASIPIYHRDIKSANILLDDKYRAKVSDFG-------ASRSVMIDQTHLTTRVQGTFG 558
+ I HRD+KS NIL+ ++D G A+ ++ I H RV GT
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH---RV-GTKR 180
Query: 559 YLDPEYFRSS------QFTEKSDVYSFGVVLVEL 586
Y+ PE S + +++D+Y+ G+V E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 38/214 (17%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI--NHRNVVKLLGC- 454
+G+G G V++G G VA+K +E + + E I + H N++ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERS---WFREAEIYQTVMLRHENILGFIAAD 66
Query: 455 ----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH---- 506
T++ LV ++ +G+L+ Y++ + +T E +++A+ + L +LH
Sbjct: 67 NKDNGTWTQL-WLVSDYHEHGSLFDYLN----RYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 507 -SAASIPIYHRDIKSANILLDDKYRAKVSDFG-------ASRSVMIDQTHLTTRVQGTFG 558
+ I HRD+KS NIL+ ++D G A+ ++ I H RV GT
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH---RV-GTKR 177
Query: 559 YLDPEYFRSS------QFTEKSDVYSFGVVLVEL 586
Y+ PE S + +++D+Y+ G+V E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKS 574
HRD+K NIL+ A + DFG + + ++ GT Y PE F S T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 575 DVYSFGVVLVELLTGQKP 592
D+Y+ VL E LTG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 396 RILGQGGQGTV---YKGMLTNGRIVAIKKSKLVDESNIE--QFINEVAILSQINHRNVVK 450
R +G G G+V Y L VA+KK +S I + E+ +L + H NV+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 91
Query: 451 LL-----GCCLE--TEVPL---LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
LL +E +EV L L+ + N Q + D+ +F + +R
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR--------- 142
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
L Y+HSA I HRD+K +N+ +++ ++ DFG +R + T GY+
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT----------GYV 189
Query: 561 DPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTD 597
++R+ + + + D++S G ++ ELL G+ +D
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 233
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFI--NEVAILSQINHRNVVKLLGCC 455
LG+G G V++ + T+ + + +K V +Q + E++IL+ HRN++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYM--AKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515
E ++++EFI +++ I+ T F + + +V +AL +LHS I H
Sbjct: 71 ESMEELVMIFEFISGLDIFERIN--TSAFELNEREIVSYVHQVCEALQFLHSH---NIGH 125
Query: 516 RDIKSANILLDDKYRA--KVSDFGASRSVMI-DQTHLTTRVQGTFGYLDPEYFRSSQFTE 572
DI+ NI+ + + K+ +FG +R + D L Y PE + +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP---EYYAPEVHQHDVVST 182
Query: 573 KSDVYSFGVVLVELLTGQKP 592
+D++S G ++ LL+G P
Sbjct: 183 ATDMWSLGTLVYVLLSGINP 202
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 32/211 (15%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI--NHRNVVKLLGCC 455
+G+G G V++G G VA+K DE + + E + + + H N++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 100
Query: 456 LETEVP----LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH----- 506
+ + L+ + G+LY Y+ T + LRI + ++ L +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHIEIFG 156
Query: 507 SAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ-----GTFGYLD 561
+ I HRD+KS NIL+ + ++D G +VM Q+ V GT Y+
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGL--AVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 562 PEYFRSS------QFTEKSDVYSFGVVLVEL 586
PE + ++ D+++FG+VL E+
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 397 ILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN-HRNVVKLLGC 454
+LG+G V + L + A+K + + EV +L Q HRNV++L+
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 455 CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514
E + LV+E + G++ +IH + + + + +V+ AL +LH+ I
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IA 133
Query: 515 HRDIKSANILLDDKYR---AKVSDFGASRSVM-------IDQTHLTTRVQGTFGYLDPEY 564
HRD+K NIL + + K+ DF + I L T G+ Y+ PE
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC-GSAEYMAPEV 192
Query: 565 F-----RSSQFTEKSDVYSFGVVLVELLTGQKP 592
+S + ++ D++S GV+L LL+G P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 496 IEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAK----VSDFGASRSVMIDQTHLTT 551
IE+ AL YL + + H D+K NILLDD Y K V + + I +T T
Sbjct: 144 IEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200
Query: 552 RVQGTFG-----------------YLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIR 594
FG Y PE + + SD++SFG VL EL TG R
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
Query: 595 STDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEI 634
+ + E +++ ++ + +N L+E K ++E+
Sbjct: 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDEL 300
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 102/259 (39%), Gaps = 55/259 (21%)
Query: 398 LGQGGQGTVYKGMLTNGR-IVAIK-----KSKLVDESNIEQFINEVAILSQINHRNVVKL 451
+GQG G V + R I AIK K + ++ ++E+ EV ++ +++H N+ +L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 452 LGCCLETEVPLLVYEFIPNGTLYQ----YIHDQT-------------------------- 481
+ + LV E G L +I D T
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 482 -----EEFPITWEIRL--RIAIEVSDALCYLHSAASIPIYHRDIKSANILL--DDKYRAK 532
E +L I ++ AL YLH+ I HRDIK N L + + K
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIK 210
Query: 533 VSDFGASRSVMI----DQTHLTTRVQGTFGYLDPEYFRSSQ--FTEKSDVYSFGVVLVEL 586
+ DFG S+ + +TT+ GT ++ PE ++ + K D +S GV+L L
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLL 269
Query: 587 LTGQKPIRSTDSEEDKSLV 605
L G P + + S V
Sbjct: 270 LMGAVPFPGVNDADTISQV 288
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 24/213 (11%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRN--VVKLLG 453
+G GG V++ + +I AIK L D ++ + NE+A L+++ + +++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 454 CCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPI 513
+ + +V E N L ++ + P WE R + +A+ +H I
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEAVHTIHQHG---I 176
Query: 514 YHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ-GTFGYLDPEYFRSSQFTE 572
H D+K AN L+ D K+ DFG + + D T + Q GT Y+ PE + +
Sbjct: 177 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 573 KS-----------DVYSFGVVLVELLTGQKPIR 594
++ DV+S G +L + G+ P +
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVKLLGC 454
+G G G+V T G VA+KK +S I ++ E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 455 -----CLE--TEVPLLVYEF---IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504
LE +V L+ + + N Q + D +F I +R L Y
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR---------GLKY 140
Query: 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEY 564
+HSA I HRD+K +N+ +++ K+ DF +R + T GY+ +
Sbjct: 141 IHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMT----------GYVATRW 187
Query: 565 FRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605
+R+ + + + D++S G ++ ELLTG+ TD + L+
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 396 RILGQGGQGTV---YKGMLTNGRIVAIKKSKLVDESNI--EQFINEVAILSQINHRNVVK 450
R +G G G+V Y L VA+KK +S I + E+ +L + H NV+
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIG 83
Query: 451 LL-----GCCLE--TEVPL---LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD 500
LL +E +EV L L+ + N Q + D+ +F + +R
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR--------- 134
Query: 501 ALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYL 560
L Y+HSA I HRD+K +N+ +++ ++ DFG +R + T GY+
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT----------GYV 181
Query: 561 DPEYFRSSQ-------FTEKSDVYSFGVVLVELLTGQKPIRSTD 597
++R+ + + + D++S G ++ ELL G+ +D
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 225
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 24/213 (11%)
Query: 398 LGQGGQGTVYKGMLTNGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRN--VVKLLG 453
+G GG V++ + +I AIK L D ++ + NE+A L+++ + +++L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 454 CCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPI 513
+ + +V E N L ++ + P WE R + +A+ +H I
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDP--WE-RKSYWKNMLEAVHTIHQHG---I 176
Query: 514 YHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ-GTFGYLDPEYFRSSQFTE 572
H D+K AN L+ D K+ DFG + + D T + Q GT Y+ PE + +
Sbjct: 177 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 573 KS-----------DVYSFGVVLVELLTGQKPIR 594
++ DV+S G +L + G+ P +
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,273,875
Number of Sequences: 62578
Number of extensions: 845954
Number of successful extensions: 4582
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 1967
Number of HSP's gapped (non-prelim): 1114
length of query: 700
length of database: 14,973,337
effective HSP length: 106
effective length of query: 594
effective length of database: 8,340,069
effective search space: 4954000986
effective search space used: 4954000986
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)