Query 005355
Match_columns 700
No_of_seqs 479 out of 3650
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 22:09:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005355.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005355hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.6E-52 3.4E-57 443.0 28.0 292 376-668 61-355 (361)
2 KOG0581 Mitogen-activated prot 100.0 2.9E-46 6.2E-51 372.9 19.7 252 390-661 79-335 (364)
3 KOG0192 Tyrosine kinase specif 100.0 7.2E-46 1.6E-50 389.2 22.5 264 389-671 40-309 (362)
4 KOG0197 Tyrosine kinases [Sign 100.0 3.3E-46 7.1E-51 389.6 16.3 262 385-667 201-463 (468)
5 KOG0575 Polo-like serine/threo 100.0 1E-44 2.2E-49 381.7 21.9 247 390-660 18-268 (592)
6 KOG0595 Serine/threonine-prote 100.0 2.1E-44 4.6E-49 362.2 22.0 249 389-659 9-266 (429)
7 KOG0615 Serine/threonine prote 100.0 5.8E-45 1.3E-49 365.4 16.9 253 388-660 170-436 (475)
8 KOG1026 Nerve growth factor re 100.0 8.4E-45 1.8E-49 396.7 18.1 271 382-671 478-768 (774)
9 KOG0591 NIMA (never in mitosis 100.0 9.8E-45 2.1E-49 346.4 8.4 259 389-663 18-283 (375)
10 KOG0598 Ribosomal protein S6 k 100.0 5.2E-43 1.1E-47 349.6 16.6 243 388-653 23-269 (357)
11 KOG0593 Predicted protein kina 100.0 1.8E-42 3.9E-47 334.2 13.1 264 390-660 2-283 (396)
12 KOG2052 Activin A type IB rece 100.0 1.4E-41 3E-46 344.0 19.4 273 383-668 204-506 (513)
13 KOG0600 Cdc2-related protein k 100.0 5.9E-42 1.3E-46 352.0 16.7 266 389-660 116-399 (560)
14 KOG0578 p21-activated serine/t 100.0 7.1E-42 1.5E-46 357.5 16.1 250 389-660 272-522 (550)
15 KOG1095 Protein tyrosine kinas 100.0 2.2E-41 4.9E-46 382.9 18.9 274 387-679 689-975 (1025)
16 KOG0582 Ste20-like serine/thre 100.0 1.1E-40 2.3E-45 337.8 21.3 265 385-660 21-292 (516)
17 KOG0659 Cdk activating kinase 100.0 4.7E-41 1E-45 319.4 16.2 265 390-661 2-281 (318)
18 KOG0661 MAPK related serine/th 100.0 8.3E-42 1.8E-46 348.4 11.9 267 387-661 7-291 (538)
19 KOG0198 MEKK and related serin 100.0 3.6E-41 7.7E-46 343.0 16.3 255 389-662 16-277 (313)
20 KOG0616 cAMP-dependent protein 100.0 9.7E-41 2.1E-45 321.8 18.2 237 389-652 43-283 (355)
21 KOG0193 Serine/threonine prote 100.0 2.6E-41 5.6E-46 354.0 14.5 271 380-670 382-658 (678)
22 KOG0592 3-phosphoinositide-dep 100.0 8.5E-41 1.8E-45 346.2 17.4 253 386-661 69-338 (604)
23 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.1E-40 4.6E-45 353.5 20.8 264 386-667 3-336 (338)
24 KOG0196 Tyrosine kinase, EPH ( 100.0 1.8E-41 3.8E-46 362.7 12.2 261 386-667 625-893 (996)
25 KOG3653 Transforming growth fa 100.0 4.7E-40 1E-44 335.3 21.5 271 389-670 209-508 (534)
26 KOG4721 Serine/threonine prote 100.0 4.7E-41 1E-45 347.2 12.4 257 384-671 118-374 (904)
27 KOG0583 Serine/threonine prote 100.0 9E-40 1.9E-44 346.5 22.3 256 387-667 14-280 (370)
28 PHA02988 hypothetical protein; 100.0 3.3E-39 7.2E-44 335.1 22.6 246 396-667 26-281 (283)
29 KOG0194 Protein tyrosine kinas 100.0 4.2E-40 9.1E-45 349.6 15.9 268 382-671 149-426 (474)
30 KOG0605 NDR and related serine 100.0 1.7E-39 3.8E-44 336.9 19.8 255 386-660 137-444 (550)
31 KOG1094 Discoidin domain recep 100.0 3.8E-39 8.2E-44 334.6 20.8 268 385-665 533-804 (807)
32 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.8E-39 8.2E-44 331.8 20.4 256 389-665 4-265 (266)
33 KOG0611 Predicted serine/threo 100.0 6.1E-40 1.3E-44 326.8 13.4 247 389-661 52-303 (668)
34 KOG0201 Serine/threonine prote 100.0 1.6E-40 3.6E-45 336.5 9.1 249 389-660 12-262 (467)
35 cd05096 PTKc_DDR1 Catalytic do 100.0 1.3E-38 2.9E-43 334.4 23.1 264 389-664 4-304 (304)
36 KOG0597 Serine-threonine prote 100.0 9.3E-40 2E-44 338.1 13.9 246 390-660 2-250 (808)
37 cd05072 PTKc_Lyn Catalytic dom 100.0 8.8E-39 1.9E-43 327.9 20.2 257 388-665 4-261 (261)
38 cd05104 PTKc_Kit Catalytic dom 100.0 8.8E-39 1.9E-43 345.2 21.1 264 384-665 29-374 (375)
39 KOG0694 Serine/threonine prote 100.0 3.5E-39 7.5E-44 343.6 17.4 246 385-655 363-613 (694)
40 cd05631 STKc_GRK4 Catalytic do 100.0 2.1E-38 4.5E-43 329.7 22.9 251 391-660 1-260 (285)
41 cd07848 STKc_CDKL5 Catalytic d 100.0 1.1E-38 2.4E-43 332.1 19.9 265 390-660 1-283 (287)
42 KOG1025 Epidermal growth facto 100.0 1.8E-38 3.9E-43 340.6 21.4 254 393-668 699-960 (1177)
43 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.9E-38 4.2E-43 324.4 21.0 252 390-663 4-256 (256)
44 cd05052 PTKc_Abl Catalytic dom 100.0 1.6E-38 3.5E-43 326.4 20.2 256 389-665 5-262 (263)
45 cd05068 PTKc_Frk_like Catalyti 100.0 2.3E-38 5E-43 324.9 21.3 258 387-665 3-261 (261)
46 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-38 2.3E-43 344.3 19.7 264 385-666 33-373 (374)
47 KOG0585 Ca2+/calmodulin-depend 100.0 5E-39 1.1E-43 327.5 15.0 262 380-662 87-373 (576)
48 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-38 2.9E-43 326.5 18.2 258 387-665 3-261 (261)
49 KOG0663 Protein kinase PITSLRE 100.0 1.2E-38 2.5E-43 311.8 16.8 265 389-660 75-360 (419)
50 KOG0588 Serine/threonine prote 100.0 9.6E-39 2.1E-43 337.3 17.4 247 390-661 12-263 (786)
51 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.4E-38 5.2E-43 329.7 20.4 265 389-660 4-284 (288)
52 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.5E-38 5.4E-43 336.7 20.8 253 390-661 1-257 (333)
53 KOG4278 Protein tyrosine kinas 100.0 2.5E-39 5.3E-44 336.9 12.5 265 382-667 259-525 (1157)
54 PTZ00263 protein kinase A cata 100.0 3.2E-38 7E-43 335.1 21.4 246 389-661 17-271 (329)
55 cd05612 STKc_PRKX_like Catalyt 100.0 1.7E-38 3.6E-43 331.4 18.7 245 390-661 1-254 (291)
56 KOG0660 Mitogen-activated prot 100.0 6.7E-39 1.4E-43 318.8 14.7 267 388-661 20-310 (359)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 3.8E-38 8.3E-43 334.9 21.6 261 389-661 4-301 (331)
58 cd05571 STKc_PKB Catalytic dom 100.0 4.8E-38 1E-42 333.0 21.9 241 396-660 1-250 (323)
59 PF07714 Pkinase_Tyr: Protein 100.0 1.3E-38 2.9E-43 326.3 16.9 249 394-662 3-259 (259)
60 KOG2345 Serine/threonine prote 100.0 2.4E-39 5.2E-44 304.8 10.2 267 385-666 16-301 (302)
61 cd05048 PTKc_Ror Catalytic Dom 100.0 6.2E-38 1.3E-42 325.7 21.6 258 389-665 4-283 (283)
62 KOG0580 Serine/threonine prote 100.0 5.4E-39 1.2E-43 301.1 12.0 250 388-661 20-273 (281)
63 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.4E-38 1.4E-42 320.7 20.4 252 390-663 4-256 (256)
64 cd05049 PTKc_Trk Catalytic dom 100.0 6.1E-38 1.3E-42 325.1 20.4 257 389-664 4-280 (280)
65 cd05033 PTKc_EphR Catalytic do 100.0 1.4E-37 3E-42 320.0 22.8 256 389-665 3-265 (266)
66 PLN00113 leucine-rich repeat r 100.0 8.1E-37 1.8E-41 369.9 33.4 271 386-673 686-959 (968)
67 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-37 2.4E-42 325.3 22.0 261 389-668 4-285 (291)
68 KOG0589 Serine/threonine prote 100.0 1.1E-38 2.4E-43 332.4 14.4 252 389-661 3-258 (426)
69 cd05093 PTKc_TrkB Catalytic do 100.0 1.1E-37 2.3E-42 324.9 21.7 261 389-668 4-282 (288)
70 cd05059 PTKc_Tec_like Catalyti 100.0 8.7E-38 1.9E-42 319.7 20.3 251 390-662 4-255 (256)
71 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.1E-37 2.4E-42 319.6 21.1 257 387-665 3-260 (260)
72 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.2E-37 2.5E-42 319.5 21.1 255 388-664 4-259 (260)
73 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-37 2.7E-42 328.9 21.6 258 389-668 6-271 (316)
74 cd05089 PTKc_Tie1 Catalytic do 100.0 1.6E-37 3.4E-42 325.1 22.1 273 390-683 2-293 (297)
75 cd05062 PTKc_IGF-1R Catalytic 100.0 9.9E-38 2.1E-42 323.2 20.3 259 387-664 3-277 (277)
76 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.2E-37 2.6E-42 337.6 21.5 265 385-667 32-399 (400)
77 PHA03212 serine/threonine kina 100.0 1.8E-37 3.8E-42 336.0 22.7 260 388-660 90-375 (391)
78 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-37 2.9E-42 328.0 21.0 239 398-660 1-246 (312)
79 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.3E-37 2.7E-42 323.6 20.3 265 389-666 3-284 (284)
80 cd05614 STKc_MSK2_N N-terminal 100.0 1.5E-37 3.3E-42 330.6 21.2 251 391-660 1-266 (332)
81 cd05071 PTKc_Src Catalytic dom 100.0 1.9E-37 4E-42 318.4 21.0 256 388-665 4-260 (262)
82 cd05043 PTK_Ryk Pseudokinase d 100.0 1.9E-37 4.1E-42 321.6 21.1 263 387-668 3-279 (280)
83 KOG0199 ACK and related non-re 100.0 9.2E-38 2E-42 329.9 18.9 259 388-667 108-374 (1039)
84 cd05053 PTKc_FGFR Catalytic do 100.0 2E-37 4.4E-42 323.6 21.4 264 384-666 6-292 (293)
85 cd05593 STKc_PKB_gamma Catalyt 100.0 2.5E-37 5.4E-42 328.1 22.1 242 396-661 1-251 (328)
86 KOG0594 Protein kinase PCTAIRE 100.0 6.9E-38 1.5E-42 313.0 16.7 272 389-665 10-308 (323)
87 cd05595 STKc_PKB_beta Catalyti 100.0 1.8E-37 4E-42 328.4 21.0 241 396-660 1-250 (323)
88 cd07862 STKc_CDK6 Catalytic do 100.0 1.9E-37 4.1E-42 323.2 20.8 261 390-660 1-286 (290)
89 PTZ00426 cAMP-dependent protei 100.0 1.8E-37 4E-42 330.3 20.9 247 388-661 28-284 (340)
90 cd06650 PKc_MEK1 Catalytic dom 100.0 1.7E-37 3.7E-42 330.0 20.5 264 388-660 3-298 (333)
91 KOG1989 ARK protein kinase fam 100.0 7.9E-38 1.7E-42 343.9 18.3 263 385-668 32-314 (738)
92 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.7E-37 3.7E-42 331.0 20.6 270 391-667 1-298 (338)
93 cd05596 STKc_ROCK Catalytic do 100.0 1.1E-37 2.5E-42 335.9 19.3 255 387-661 40-304 (370)
94 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.3E-37 9.4E-42 322.8 23.2 263 389-660 4-287 (303)
95 PTZ00267 NIMA-related protein 100.0 2.4E-37 5.3E-42 344.1 22.5 252 390-660 67-322 (478)
96 cd05054 PTKc_VEGFR Catalytic d 100.0 1.4E-37 3.1E-42 330.9 19.8 263 387-667 4-335 (337)
97 cd08228 STKc_Nek6 Catalytic do 100.0 3.7E-37 8E-42 316.9 22.0 260 390-666 2-266 (267)
98 cd05601 STKc_CRIK Catalytic do 100.0 1E-37 2.3E-42 331.6 18.4 252 390-660 1-262 (330)
99 cd05090 PTKc_Ror1 Catalytic do 100.0 3.3E-37 7.1E-42 320.3 21.7 256 390-664 5-282 (283)
100 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-37 2.4E-42 334.2 18.3 252 390-661 1-285 (350)
101 cd05088 PTKc_Tie2 Catalytic do 100.0 3.4E-37 7.5E-42 323.5 21.6 272 389-681 6-296 (303)
102 KOG4257 Focal adhesion tyrosin 100.0 3.5E-38 7.6E-43 329.1 13.8 262 384-667 383-651 (974)
103 cd05621 STKc_ROCK2 Catalytic d 100.0 2.7E-37 5.8E-42 332.7 21.2 256 386-661 39-304 (370)
104 cd05069 PTKc_Yes Catalytic dom 100.0 4.9E-37 1.1E-41 314.9 22.0 254 389-664 5-259 (260)
105 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.3E-37 9.3E-42 319.4 21.6 267 392-666 6-282 (283)
106 cd05584 STKc_p70S6K Catalytic 100.0 4.9E-37 1.1E-41 325.2 22.3 242 395-660 1-255 (323)
107 cd05034 PTKc_Src_like Catalyti 100.0 3.5E-37 7.7E-42 315.9 20.4 257 387-664 3-260 (261)
108 cd05084 PTKc_Fes Catalytic dom 100.0 4.7E-37 1E-41 313.3 21.2 247 396-663 1-251 (252)
109 cd05599 STKc_NDR_like Catalyti 100.0 3E-37 6.5E-42 332.7 20.7 251 390-660 1-295 (364)
110 cd05588 STKc_aPKC Catalytic do 100.0 7.1E-37 1.5E-41 324.8 22.9 248 396-660 1-261 (329)
111 cd05035 PTKc_Axl_like Catalyti 100.0 8.6E-37 1.9E-41 315.0 22.9 255 392-665 1-272 (273)
112 cd05626 STKc_LATS2 Catalytic d 100.0 5.3E-37 1.2E-41 332.5 22.3 252 391-661 2-305 (381)
113 cd05073 PTKc_Hck Catalytic dom 100.0 6.7E-37 1.4E-41 313.9 21.6 257 387-665 3-260 (260)
114 cd05039 PTKc_Csk_like Catalyti 100.0 8.4E-37 1.8E-41 312.3 22.2 251 389-665 5-256 (256)
115 cd05085 PTKc_Fer Catalytic dom 100.0 8.1E-37 1.8E-41 311.1 21.9 247 396-663 1-249 (250)
116 cd05092 PTKc_TrkA Catalytic do 100.0 5E-37 1.1E-41 318.5 20.6 257 389-664 4-280 (280)
117 cd05045 PTKc_RET Catalytic dom 100.0 7.5E-37 1.6E-41 318.8 22.0 258 391-667 1-288 (290)
118 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.5E-36 3.3E-41 312.2 23.9 259 390-666 2-266 (267)
119 cd05589 STKc_PKN Catalytic dom 100.0 6.1E-37 1.3E-41 324.7 21.5 244 392-660 1-256 (324)
120 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.8E-37 1.5E-41 315.2 21.3 256 389-665 4-267 (268)
121 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.5E-37 1.2E-41 317.6 20.5 257 388-663 4-276 (277)
122 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.7E-37 1E-41 323.1 20.3 264 387-669 15-303 (307)
123 PLN00034 mitogen-activated pro 100.0 3.4E-37 7.5E-42 330.6 19.5 249 389-661 73-328 (353)
124 cd05618 STKc_aPKC_iota Catalyt 100.0 1.1E-36 2.4E-41 323.2 23.0 243 396-655 1-250 (329)
125 cd08229 STKc_Nek7 Catalytic do 100.0 7.2E-37 1.6E-41 314.7 20.8 260 390-666 2-266 (267)
126 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-36 2.3E-41 311.8 21.9 246 397-665 2-255 (257)
127 cd05628 STKc_NDR1 Catalytic do 100.0 9E-37 1.9E-41 328.6 22.4 253 390-661 1-293 (363)
128 cd05594 STKc_PKB_alpha Catalyt 100.0 4.4E-37 9.5E-42 326.0 19.6 242 396-661 1-252 (325)
129 cd05075 PTKc_Axl Catalytic dom 100.0 1.2E-36 2.6E-41 314.0 22.3 255 392-665 1-271 (272)
130 cd07853 STKc_NLK Catalytic dom 100.0 8.2E-37 1.8E-41 330.1 22.0 263 391-661 1-288 (372)
131 cd05605 STKc_GRK4_like Catalyt 100.0 1.2E-36 2.6E-41 316.4 22.5 252 391-661 1-261 (285)
132 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.4E-37 1.4E-41 331.8 21.1 265 384-666 31-400 (401)
133 cd05111 PTK_HER3 Pseudokinase 100.0 1.1E-36 2.3E-41 315.8 21.6 256 390-667 7-270 (279)
134 cd05590 STKc_nPKC_eta Catalyti 100.0 8.6E-37 1.9E-41 322.9 21.2 236 396-655 1-241 (320)
135 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-36 2.7E-41 322.3 22.4 241 391-655 1-246 (324)
136 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.8E-37 1.7E-41 321.0 20.7 264 387-669 12-300 (304)
137 cd05061 PTKc_InsR Catalytic do 100.0 8.7E-37 1.9E-41 318.0 20.8 261 386-665 2-278 (288)
138 PTZ00283 serine/threonine prot 100.0 4.7E-37 1E-41 342.0 20.0 258 385-661 27-297 (496)
139 cd05091 PTKc_Ror2 Catalytic do 100.0 4.3E-37 9.2E-42 319.4 18.3 256 390-664 5-282 (283)
140 KOG0599 Phosphorylase kinase g 100.0 1.2E-37 2.7E-42 296.2 12.9 254 386-660 13-282 (411)
141 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.4E-36 3E-41 323.5 22.6 266 385-669 7-297 (334)
142 cd05629 STKc_NDR_like_fungal C 100.0 6.8E-37 1.5E-41 331.3 20.5 252 390-661 1-305 (377)
143 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-36 4.1E-41 310.8 22.8 251 390-661 2-260 (263)
144 cd05115 PTKc_Zap-70 Catalytic 100.0 1.7E-36 3.6E-41 310.5 22.2 247 397-665 2-255 (257)
145 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-36 2.4E-41 322.3 21.6 242 396-661 1-254 (321)
146 cd05622 STKc_ROCK1 Catalytic d 100.0 7E-37 1.5E-41 329.8 20.4 261 382-662 35-305 (371)
147 cd05055 PTKc_PDGFR Catalytic d 100.0 1.1E-36 2.4E-41 319.5 21.3 261 386-665 31-301 (302)
148 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.3E-36 2.8E-41 320.8 22.0 266 386-670 8-298 (314)
149 cd05625 STKc_LATS1 Catalytic d 100.0 9.2E-37 2E-41 330.9 21.3 250 391-660 2-304 (382)
150 cd05032 PTKc_InsR_like Catalyt 100.0 8E-37 1.7E-41 316.2 19.7 259 387-664 3-277 (277)
151 cd05617 STKc_aPKC_zeta Catalyt 100.0 2E-36 4.2E-41 321.1 23.1 243 396-655 1-248 (327)
152 cd05592 STKc_nPKC_theta_delta 100.0 1.5E-36 3.3E-41 320.4 22.0 241 396-660 1-247 (316)
153 cd05056 PTKc_FAK Catalytic dom 100.0 1.3E-36 2.8E-41 313.5 20.9 258 389-668 5-268 (270)
154 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-36 4.5E-41 309.1 22.2 250 391-661 1-253 (256)
155 cd05066 PTKc_EphR_A Catalytic 100.0 2E-36 4.3E-41 311.7 21.9 256 389-665 3-266 (267)
156 KOG0658 Glycogen synthase kina 100.0 2.1E-37 4.5E-42 308.7 13.9 270 389-668 23-315 (364)
157 cd05112 PTKc_Itk Catalytic dom 100.0 1.3E-36 2.8E-41 310.8 20.1 253 389-663 3-256 (256)
158 cd05616 STKc_cPKC_beta Catalyt 100.0 2.4E-36 5.1E-41 320.1 22.7 241 391-655 1-246 (323)
159 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-36 2.4E-41 320.6 20.0 264 390-660 6-285 (309)
160 cd05082 PTKc_Csk Catalytic dom 100.0 2.1E-36 4.7E-41 309.3 21.6 250 389-665 5-256 (256)
161 cd05097 PTKc_DDR_like Catalyti 100.0 1.7E-36 3.7E-41 317.0 21.2 264 389-664 4-295 (295)
162 cd05582 STKc_RSK_N N-terminal 100.0 6.2E-37 1.3E-41 323.8 18.0 239 395-657 1-245 (318)
163 KOG0033 Ca2+/calmodulin-depend 100.0 1.1E-38 2.5E-43 298.9 4.1 251 389-660 10-266 (355)
164 cd06646 STKc_MAP4K5 Catalytic 100.0 1.7E-36 3.6E-41 312.1 20.7 255 389-662 8-266 (267)
165 PF00069 Pkinase: Protein kina 100.0 2.2E-36 4.7E-41 309.6 21.4 252 392-660 1-256 (260)
166 cd05598 STKc_LATS Catalytic do 100.0 6.1E-37 1.3E-41 331.6 18.2 252 390-661 1-301 (376)
167 cd06654 STKc_PAK1 Catalytic do 100.0 2.5E-36 5.5E-41 315.8 21.7 250 389-660 19-269 (296)
168 KOG0610 Putative serine/threon 100.0 1E-36 2.2E-41 306.8 17.7 269 389-676 76-409 (459)
169 cd05065 PTKc_EphR_B Catalytic 100.0 2.4E-36 5.2E-41 311.3 21.3 255 390-665 4-268 (269)
170 cd05109 PTKc_HER2 Catalytic do 100.0 2.5E-36 5.5E-41 313.0 21.5 259 389-669 6-272 (279)
171 cd05570 STKc_PKC Catalytic dom 100.0 2.1E-36 4.5E-41 319.7 21.2 241 396-660 1-251 (318)
172 cd05047 PTKc_Tie Catalytic dom 100.0 3.5E-36 7.6E-41 310.4 22.1 250 396-666 1-269 (270)
173 cd08219 STKc_Nek3 Catalytic do 100.0 3E-36 6.6E-41 307.9 21.5 250 391-661 1-252 (255)
174 cd05060 PTKc_Syk_like Catalyti 100.0 3.9E-36 8.4E-41 307.6 22.3 248 396-666 1-256 (257)
175 cd05597 STKc_DMPK_like Catalyt 100.0 2.7E-36 5.8E-41 320.6 21.8 255 390-661 1-266 (331)
176 cd05608 STKc_GRK1 Catalytic do 100.0 2.5E-36 5.5E-41 313.2 20.9 246 398-660 1-256 (280)
177 cd05619 STKc_nPKC_theta Cataly 100.0 3.6E-36 7.8E-41 317.4 22.4 241 396-660 1-247 (316)
178 cd05620 STKc_nPKC_delta Cataly 100.0 2.5E-36 5.3E-41 318.8 21.1 240 396-659 1-246 (316)
179 cd05041 PTKc_Fes_like Catalyti 100.0 5.3E-36 1.1E-40 305.3 22.7 247 396-663 1-250 (251)
180 cd05050 PTKc_Musk Catalytic do 100.0 2.1E-36 4.5E-41 315.1 20.1 258 388-664 3-288 (288)
181 cd05051 PTKc_DDR Catalytic dom 100.0 4.7E-36 1E-40 313.6 22.8 265 388-664 3-296 (296)
182 cd05575 STKc_SGK Catalytic dom 100.0 2.1E-36 4.5E-41 320.5 20.2 237 396-656 1-242 (323)
183 cd06619 PKc_MKK5 Catalytic dom 100.0 6E-36 1.3E-40 310.2 22.9 251 390-661 1-253 (279)
184 cd05630 STKc_GRK6 Catalytic do 100.0 5.8E-36 1.2E-40 311.3 22.8 251 391-660 1-260 (285)
185 cd05095 PTKc_DDR2 Catalytic do 100.0 4.7E-36 1E-40 313.8 22.1 265 388-664 3-296 (296)
186 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.5E-36 5.5E-41 313.9 19.9 262 390-665 4-283 (284)
187 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.5E-36 5.4E-41 322.5 20.4 263 387-667 4-341 (343)
188 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2E-36 4.4E-41 317.3 19.2 271 389-666 5-293 (301)
189 cd05607 STKc_GRK7 Catalytic do 100.0 4.4E-36 9.6E-41 310.9 21.5 248 398-663 1-252 (277)
190 cd05046 PTK_CCK4 Pseudokinase 100.0 4.7E-36 1E-40 310.2 21.5 257 389-663 4-274 (275)
191 PTZ00036 glycogen synthase kin 100.0 1.9E-36 4E-41 333.2 19.6 261 387-660 63-350 (440)
192 cd06624 STKc_ASK Catalytic dom 100.0 7.3E-36 1.6E-40 307.6 22.7 259 384-660 2-264 (268)
193 cd00192 PTKc Catalytic domain 100.0 5.8E-36 1.3E-40 306.3 21.7 249 396-663 1-262 (262)
194 cd06615 PKc_MEK Catalytic doma 100.0 3.9E-36 8.4E-41 316.3 20.8 263 390-661 1-287 (308)
195 KOG4717 Serine/threonine prote 100.0 1.5E-36 3.2E-41 310.7 16.7 248 389-660 17-269 (864)
196 cd05632 STKc_GRK5 Catalytic do 100.0 7.9E-36 1.7E-40 310.3 22.6 251 391-660 1-260 (285)
197 cd07863 STKc_CDK4 Catalytic do 100.0 4.8E-36 1E-40 312.3 21.0 260 391-660 1-284 (288)
198 cd05623 STKc_MRCK_alpha Cataly 100.0 5.2E-36 1.1E-40 318.6 21.7 255 390-661 1-266 (332)
199 cd07861 STKc_CDK1_euk Catalyti 100.0 5.2E-36 1.1E-40 311.4 21.1 263 391-660 1-281 (285)
200 cd05624 STKc_MRCK_beta Catalyt 100.0 5.1E-36 1.1E-40 318.5 21.4 255 390-661 1-266 (331)
201 cd05602 STKc_SGK1 Catalytic do 100.0 3.5E-36 7.7E-41 319.0 20.2 243 396-662 1-248 (325)
202 cd05058 PTKc_Met_Ron Catalytic 100.0 7E-36 1.5E-40 306.5 21.7 250 396-666 1-260 (262)
203 KOG0584 Serine/threonine prote 100.0 5.3E-37 1.1E-41 324.0 13.5 245 393-660 43-295 (632)
204 cd07876 STKc_JNK2 Catalytic do 100.0 6E-36 1.3E-40 321.8 22.1 263 388-661 19-315 (359)
205 KOG0032 Ca2+/calmodulin-depend 100.0 7.2E-36 1.6E-40 316.4 22.2 252 388-661 33-293 (382)
206 cd05615 STKc_cPKC_alpha Cataly 100.0 7.2E-36 1.6E-40 316.3 22.0 241 391-655 1-246 (323)
207 cd05604 STKc_SGK3 Catalytic do 100.0 2.9E-36 6.4E-41 319.6 19.0 242 396-661 1-247 (325)
208 cd05040 PTKc_Ack_like Catalyti 100.0 7E-36 1.5E-40 305.6 21.0 248 396-663 1-256 (257)
209 cd06637 STKc_TNIK Catalytic do 100.0 4.6E-36 1E-40 309.6 19.7 253 387-660 3-268 (272)
210 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.2E-36 1.8E-40 306.2 21.4 240 396-663 1-262 (262)
211 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4E-36 8.7E-41 311.9 19.3 263 390-666 4-284 (284)
212 PRK13184 pknD serine/threonine 100.0 8.7E-36 1.9E-40 340.4 23.5 261 390-667 2-292 (932)
213 cd06643 STKc_SLK Catalytic dom 100.0 1E-35 2.2E-40 308.9 21.9 250 392-661 7-262 (282)
214 cd05057 PTKc_EGFR_like Catalyt 100.0 1.4E-35 3E-40 307.4 22.5 257 389-667 6-270 (279)
215 cd06644 STKc_STK10_LOK Catalyt 100.0 1.9E-35 4.1E-40 308.6 23.6 252 389-660 11-268 (292)
216 cd06656 STKc_PAK3 Catalytic do 100.0 8E-36 1.7E-40 312.2 20.8 250 389-660 18-268 (297)
217 cd06631 STKc_YSK4 Catalytic do 100.0 1.3E-35 2.8E-40 305.1 22.0 250 391-660 1-261 (265)
218 cd06612 STKc_MST1_2 Catalytic 100.0 1E-35 2.2E-40 304.0 20.9 250 389-660 2-252 (256)
219 cd05627 STKc_NDR2 Catalytic do 100.0 3.8E-36 8.3E-41 323.4 18.6 252 390-661 1-293 (360)
220 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.5E-35 7.6E-40 302.7 25.0 253 396-663 1-268 (269)
221 KOG0667 Dual-specificity tyros 100.0 7.4E-36 1.6E-40 318.5 20.4 263 388-660 184-501 (586)
222 cd08221 STKc_Nek9 Catalytic do 100.0 1.5E-35 3.2E-40 302.9 22.0 251 391-662 1-254 (256)
223 PHA03209 serine/threonine kina 100.0 1.4E-35 2.9E-40 318.5 22.6 260 387-660 63-350 (357)
224 cd05603 STKc_SGK2 Catalytic do 100.0 7.5E-36 1.6E-40 316.0 20.2 237 396-656 1-242 (321)
225 cd06655 STKc_PAK2 Catalytic do 100.0 9.8E-36 2.1E-40 311.3 20.7 250 389-660 18-268 (296)
226 cd07874 STKc_JNK3 Catalytic do 100.0 8E-36 1.7E-40 320.4 20.5 264 387-661 14-311 (355)
227 PTZ00284 protein kinase; Provi 100.0 8.7E-36 1.9E-40 331.4 21.4 266 383-660 122-437 (467)
228 cd06611 STKc_SLK_like Catalyti 100.0 1.4E-35 3E-40 307.6 21.0 253 389-661 4-262 (280)
229 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-35 3.3E-40 306.3 21.1 248 390-660 1-250 (274)
230 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-35 2.8E-40 306.8 20.5 239 397-663 2-274 (274)
231 cd06613 STKc_MAP4K3_like Catal 100.0 2.4E-35 5.2E-40 302.3 22.3 254 389-660 2-259 (262)
232 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.4E-35 5.3E-40 303.4 22.3 248 391-660 1-263 (267)
233 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.6E-35 3.4E-40 308.1 21.1 252 390-660 1-261 (286)
234 KOG0574 STE20-like serine/thre 100.0 5.6E-38 1.2E-42 301.9 2.4 251 389-661 32-283 (502)
235 smart00219 TyrKc Tyrosine kina 100.0 1.8E-35 3.8E-40 302.3 21.1 251 392-662 1-258 (258)
236 PHA03211 serine/threonine kina 100.0 1.8E-35 3.9E-40 324.3 22.5 261 389-661 168-455 (461)
237 cd06640 STKc_MST4 Catalytic do 100.0 3.2E-35 7E-40 304.4 23.0 248 390-661 4-253 (277)
238 cd08223 STKc_Nek4 Catalytic do 100.0 2.9E-35 6.2E-40 300.9 22.3 250 391-661 1-254 (257)
239 cd07875 STKc_JNK1 Catalytic do 100.0 1.2E-35 2.6E-40 320.1 20.1 263 388-661 22-318 (364)
240 cd06645 STKc_MAP4K3 Catalytic 100.0 1.3E-35 2.8E-40 305.5 19.5 253 389-660 8-264 (267)
241 PHA03207 serine/threonine kina 100.0 2E-35 4.3E-40 321.2 21.7 262 388-661 90-375 (392)
242 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.7E-35 5.8E-40 306.2 21.6 264 390-660 1-282 (286)
243 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.8E-35 3.8E-40 307.5 20.1 259 389-665 4-270 (284)
244 cd07868 STKc_CDK8 Catalytic do 100.0 2.1E-35 4.6E-40 312.0 21.0 197 395-597 6-220 (317)
245 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-35 3.7E-40 302.3 19.5 247 390-664 6-253 (254)
246 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.6E-35 7.9E-40 300.4 21.9 238 396-663 1-259 (259)
247 cd06642 STKc_STK25-YSK1 Cataly 100.0 9.7E-36 2.1E-40 308.3 17.7 248 390-661 4-253 (277)
248 cd05044 PTKc_c-ros Catalytic d 100.0 2.2E-35 4.8E-40 304.0 20.1 250 396-664 1-269 (269)
249 cd08227 PK_STRAD_alpha Pseudok 100.0 4.1E-35 9E-40 311.2 22.5 262 394-666 2-314 (327)
250 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1E-35 2.2E-40 304.7 17.3 240 396-663 1-258 (258)
251 cd05110 PTKc_HER4 Catalytic do 100.0 1.8E-35 4E-40 310.4 19.6 258 389-668 6-271 (303)
252 cd06651 STKc_MEKK3 Catalytic d 100.0 6.2E-35 1.3E-39 300.4 23.1 249 390-660 2-260 (266)
253 cd06652 STKc_MEKK2 Catalytic d 100.0 6.8E-35 1.5E-39 299.8 23.2 249 390-660 2-260 (265)
254 cd08528 STKc_Nek10 Catalytic d 100.0 3.5E-35 7.6E-40 302.6 20.9 253 391-663 1-268 (269)
255 cd05042 PTKc_Aatyk Catalytic d 100.0 7.8E-35 1.7E-39 300.1 23.5 253 396-663 1-268 (269)
256 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.6E-35 3.6E-40 316.4 19.1 259 388-661 13-298 (343)
257 cd07832 STKc_CCRK Catalytic do 100.0 3.1E-35 6.7E-40 305.7 20.6 262 391-661 1-282 (286)
258 cd06632 STKc_MEKK1_plant Catal 100.0 4.8E-35 1.1E-39 299.2 21.5 247 391-660 1-254 (258)
259 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.4E-35 1.4E-39 299.9 22.4 256 390-660 1-263 (267)
260 cd08218 STKc_Nek1 Catalytic do 100.0 4.8E-35 1E-39 299.2 21.3 250 391-661 1-253 (256)
261 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.7E-35 7.9E-40 304.7 20.7 259 381-660 7-278 (282)
262 cd07833 STKc_CDKL Catalytic do 100.0 2.7E-35 5.8E-40 306.5 19.7 265 390-660 1-284 (288)
263 KOG1024 Receptor-like protein 100.0 1.3E-35 2.8E-40 295.2 16.0 268 383-669 277-559 (563)
264 cd06638 STKc_myosinIIIA Cataly 100.0 3E-35 6.5E-40 306.0 19.6 262 381-661 9-283 (286)
265 cd06639 STKc_myosinIIIB Cataly 100.0 7.5E-35 1.6E-39 303.9 22.5 264 379-661 11-287 (291)
266 cd05574 STKc_phototropin_like 100.0 7E-35 1.5E-39 307.9 22.4 252 390-660 1-288 (316)
267 PTZ00266 NIMA-related protein 100.0 1.9E-35 4E-40 338.8 19.3 257 386-660 9-294 (1021)
268 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.9E-35 4E-40 307.5 17.6 264 390-660 1-282 (286)
269 cd05586 STKc_Sck1_like Catalyt 100.0 1.2E-35 2.7E-40 315.6 16.2 240 398-660 1-252 (330)
270 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-35 5.2E-40 307.7 18.0 249 391-661 23-272 (292)
271 cd05074 PTKc_Tyro3 Catalytic d 100.0 7.6E-35 1.7E-39 300.7 21.2 255 392-665 1-272 (273)
272 cd08217 STKc_Nek2 Catalytic do 100.0 7.8E-35 1.7E-39 298.6 21.0 251 391-661 1-262 (265)
273 cd06630 STKc_MEKK1 Catalytic d 100.0 1.1E-34 2.4E-39 298.6 22.1 252 391-660 1-263 (268)
274 cd07844 STKc_PCTAIRE_like Cata 100.0 5.7E-35 1.2E-39 304.7 20.2 263 389-660 4-287 (291)
275 cd05609 STKc_MAST Catalytic do 100.0 1.1E-34 2.4E-39 304.8 22.4 255 390-664 1-273 (305)
276 KOG0577 Serine/threonine prote 100.0 3.7E-36 7.9E-41 312.3 10.9 246 389-660 25-277 (948)
277 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.6E-34 3.5E-39 297.7 23.0 253 396-663 1-267 (268)
278 cd07839 STKc_CDK5 Catalytic do 100.0 3.1E-35 6.6E-40 305.6 17.7 261 391-660 1-280 (284)
279 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-34 2.7E-39 297.3 21.9 251 391-660 1-260 (264)
280 cd08220 STKc_Nek8 Catalytic do 100.0 1.1E-34 2.4E-39 296.4 21.3 249 391-661 1-253 (256)
281 cd07867 STKc_CDC2L6 Catalytic 100.0 8.9E-35 1.9E-39 307.2 21.3 197 395-597 6-220 (317)
282 cd06647 STKc_PAK_I Catalytic d 100.0 8.7E-35 1.9E-39 303.7 20.8 251 389-661 18-269 (293)
283 cd05580 STKc_PKA Catalytic dom 100.0 1.5E-34 3.2E-39 301.6 22.4 244 390-660 1-253 (290)
284 cd07843 STKc_CDC2L1 Catalytic 100.0 1E-34 2.3E-39 303.1 21.3 264 390-660 5-289 (293)
285 cd06641 STKc_MST3 Catalytic do 100.0 1.9E-34 4.1E-39 298.6 22.8 248 390-661 4-253 (277)
286 KOG4279 Serine/threonine prote 100.0 8.5E-36 1.8E-40 314.2 12.6 244 397-660 582-831 (1226)
287 cd07860 STKc_CDK2_3 Catalytic 100.0 1E-34 2.2E-39 301.7 20.6 260 391-660 1-280 (284)
288 cd06659 STKc_PAK6 Catalytic do 100.0 5.7E-35 1.2E-39 305.7 18.9 246 394-661 25-271 (297)
289 cd06623 PKc_MAPKK_plant_like C 100.0 2.3E-34 4.9E-39 295.3 22.7 252 390-661 1-256 (264)
290 KOG0596 Dual specificity; seri 100.0 8.5E-36 1.8E-40 308.9 12.1 255 385-660 356-626 (677)
291 cd07836 STKc_Pho85 Catalytic d 100.0 1.7E-34 3.7E-39 299.9 21.9 264 391-660 1-280 (284)
292 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.7E-34 3.7E-39 298.0 21.5 254 391-661 2-269 (272)
293 cd07841 STKc_CDK7 Catalytic do 100.0 1.1E-34 2.4E-39 303.6 20.2 260 391-660 1-281 (298)
294 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.8E-34 3.9E-39 299.6 21.5 251 390-660 1-260 (283)
295 cd06605 PKc_MAPKK Catalytic do 100.0 6.7E-35 1.5E-39 299.6 17.8 252 390-660 1-256 (265)
296 cd06608 STKc_myosinIII_like Ca 100.0 1.5E-34 3.2E-39 298.5 20.4 255 387-660 3-271 (275)
297 cd06648 STKc_PAK_II Catalytic 100.0 2.1E-34 4.6E-39 299.5 21.6 248 391-660 20-268 (285)
298 cd07840 STKc_CDK9_like Catalyt 100.0 2.2E-34 4.7E-39 299.3 21.6 263 392-660 1-283 (287)
299 cd06917 STKc_NAK1_like Catalyt 100.0 2.1E-34 4.6E-39 298.1 21.4 247 391-660 2-254 (277)
300 cd06607 STKc_TAO Catalytic dom 100.0 4.1E-34 8.9E-39 300.8 23.8 247 389-661 14-267 (307)
301 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.3E-34 5.1E-39 300.1 21.6 264 388-660 3-287 (291)
302 cd05122 PKc_STE Catalytic doma 100.0 4.4E-34 9.5E-39 290.5 23.0 249 391-660 1-250 (253)
303 PHA03210 serine/threonine kina 100.0 1.4E-34 3.1E-39 323.0 21.2 267 388-660 146-453 (501)
304 cd06614 STKc_PAK Catalytic dom 100.0 3.6E-34 7.8E-39 297.9 22.3 252 388-660 17-269 (286)
305 KOG0579 Ste20-like serine/thre 100.0 8.5E-36 1.8E-40 311.2 9.8 250 391-660 33-288 (1187)
306 cd07842 STKc_CDK8_like Catalyt 100.0 3.5E-34 7.5E-39 302.4 21.5 266 391-660 1-312 (316)
307 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.5E-34 1.8E-38 295.3 24.1 260 390-660 1-265 (287)
308 cd07837 STKc_CdkB_plant Cataly 100.0 2.9E-34 6.3E-39 299.9 20.4 263 390-660 1-290 (295)
309 cd07849 STKc_ERK1_2_like Catal 100.0 1.5E-34 3.2E-39 308.1 18.5 268 389-667 4-300 (336)
310 cd07845 STKc_CDK10 Catalytic d 100.0 2.3E-34 5E-39 303.0 19.4 265 389-660 6-289 (309)
311 cd08225 STKc_Nek5 Catalytic do 100.0 2.1E-34 4.6E-39 294.4 18.2 249 391-660 1-253 (257)
312 cd07864 STKc_CDK12 Catalytic d 100.0 3.4E-34 7.3E-39 300.5 19.9 265 386-660 3-298 (302)
313 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.5E-34 5.5E-39 306.4 19.2 272 389-669 4-301 (337)
314 cd07835 STKc_CDK1_like Catalyt 100.0 3E-34 6.6E-39 297.9 18.8 260 392-660 1-279 (283)
315 PHA02882 putative serine/threo 100.0 7.9E-34 1.7E-38 296.6 21.8 259 387-663 9-294 (294)
316 cd07831 STKc_MOK Catalytic dom 100.0 8.6E-34 1.9E-38 294.2 21.6 260 392-660 1-278 (282)
317 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.2E-33 2.6E-38 290.4 22.5 249 390-660 2-260 (264)
318 cd07850 STKc_JNK Catalytic dom 100.0 1.1E-33 2.3E-38 303.6 22.9 263 388-661 14-311 (353)
319 cd05578 STKc_Yank1 Catalytic d 100.0 3.3E-34 7.2E-39 293.4 18.0 247 391-659 1-253 (258)
320 cd08215 STKc_Nek Catalytic dom 100.0 8.2E-34 1.8E-38 289.7 20.8 250 391-660 1-254 (258)
321 cd06606 STKc_MAPKKK Catalytic 100.0 1.3E-33 2.9E-38 288.1 22.2 250 391-660 1-256 (260)
322 cd08530 STKc_CNK2-like Catalyt 100.0 5.6E-34 1.2E-38 291.0 19.2 249 391-661 1-253 (256)
323 cd06635 STKc_TAO1 Catalytic do 100.0 2E-33 4.3E-38 296.9 23.8 251 390-666 25-282 (317)
324 KOG0986 G protein-coupled rece 100.0 7.6E-35 1.7E-39 295.0 12.0 246 389-656 184-436 (591)
325 cd07865 STKc_CDK9 Catalytic do 100.0 9.1E-34 2E-38 298.2 20.7 266 389-660 11-306 (310)
326 cd05572 STKc_cGK_PKG Catalytic 100.0 1.4E-33 3.1E-38 289.4 21.1 242 398-660 1-251 (262)
327 cd05118 STKc_CMGC Catalytic do 100.0 7.4E-34 1.6E-38 294.8 19.2 259 392-660 1-279 (283)
328 cd06657 STKc_PAK4 Catalytic do 100.0 9.8E-34 2.1E-38 295.6 20.2 243 396-660 26-269 (292)
329 PLN00009 cyclin-dependent kina 100.0 1.1E-33 2.4E-38 295.5 20.2 262 390-660 2-283 (294)
330 cd06627 STKc_Cdc7_like Catalyt 100.0 2E-33 4.4E-38 286.4 21.6 247 391-660 1-250 (254)
331 cd07855 STKc_ERK5 Catalytic do 100.0 5.8E-34 1.3E-38 303.3 18.3 266 389-661 4-294 (334)
332 cd05633 STKc_GRK3 Catalytic do 100.0 1.5E-33 3.3E-38 292.2 20.6 242 397-661 1-255 (279)
333 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-33 2.4E-38 294.6 19.4 255 390-661 4-267 (288)
334 cd05577 STKc_GRK Catalytic dom 100.0 1.4E-33 3E-38 292.2 20.0 244 398-660 1-253 (277)
335 cd07852 STKc_MAPK15 Catalytic 100.0 8.4E-34 1.8E-38 302.5 18.9 266 388-661 5-295 (337)
336 cd05583 STKc_MSK_N N-terminal 100.0 1.3E-33 2.8E-38 294.0 19.9 256 391-665 1-267 (288)
337 cd07834 STKc_MAPK Catalytic do 100.0 5.4E-34 1.2E-38 303.0 17.3 270 391-667 1-297 (330)
338 KOG0200 Fibroblast/platelet-de 100.0 1.1E-33 2.4E-38 320.6 20.8 265 384-666 290-580 (609)
339 KOG0690 Serine/threonine prote 100.0 8.1E-35 1.7E-39 283.0 9.4 244 386-653 164-411 (516)
340 cd05579 STKc_MAST_like Catalyt 100.0 8.2E-34 1.8E-38 291.1 17.5 245 398-663 1-256 (265)
341 cd08226 PK_STRAD_beta Pseudoki 100.0 2.6E-33 5.6E-38 297.5 21.8 267 396-668 4-317 (328)
342 KOG4250 TANK binding protein k 100.0 3.1E-34 6.7E-39 306.6 14.6 272 392-668 15-313 (732)
343 cd05611 STKc_Rim15_like Cataly 100.0 2.8E-33 6E-38 286.9 20.8 243 396-662 2-249 (260)
344 cd07838 STKc_CDK4_6_like Catal 100.0 6E-33 1.3E-37 288.5 23.1 259 392-660 1-283 (287)
345 cd05613 STKc_MSK1_N N-terminal 100.0 3.1E-33 6.8E-38 291.5 20.9 251 391-660 1-267 (290)
346 cd06634 STKc_TAO2 Catalytic do 100.0 4.3E-33 9.4E-38 293.1 21.6 250 390-665 15-271 (308)
347 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.9E-33 8.5E-38 298.1 20.8 269 381-661 8-300 (345)
348 KOG0586 Serine/threonine prote 100.0 1.2E-33 2.5E-38 298.5 15.9 249 387-660 53-305 (596)
349 cd08216 PK_STRAD Pseudokinase 100.0 7.5E-33 1.6E-37 292.1 22.0 260 395-661 7-295 (314)
350 cd07866 STKc_BUR1 Catalytic do 100.0 2.3E-33 5.1E-38 295.3 17.9 262 389-660 7-307 (311)
351 cd06633 STKc_TAO3 Catalytic do 100.0 1.2E-32 2.6E-37 290.4 23.2 244 392-661 23-273 (313)
352 PHA03390 pk1 serine/threonine- 100.0 1.1E-32 2.3E-37 283.9 22.0 246 386-660 10-261 (267)
353 KOG0662 Cyclin-dependent kinas 100.0 9.2E-34 2E-38 254.0 11.8 264 390-660 2-282 (292)
354 cd07879 STKc_p38delta_MAPK13 C 100.0 5.4E-33 1.2E-37 296.8 19.6 266 389-667 14-305 (342)
355 cd07830 STKc_MAK_like Catalyti 100.0 4.9E-33 1.1E-37 288.8 18.8 262 392-660 1-279 (283)
356 cd07829 STKc_CDK_like Catalyti 100.0 4.7E-33 1E-37 288.6 18.4 262 392-660 1-278 (282)
357 PTZ00024 cyclin-dependent prot 100.0 4.8E-33 1E-37 296.4 19.0 260 390-660 8-312 (335)
358 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.2E-33 1.3E-37 294.4 19.7 264 386-661 6-288 (328)
359 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.5E-33 5.4E-38 299.3 16.7 261 389-660 4-299 (342)
360 cd05581 STKc_PDK1 Catalytic do 100.0 3.9E-33 8.4E-38 288.8 17.4 248 390-660 1-276 (280)
361 cd07880 STKc_p38gamma_MAPK12 C 100.0 8.9E-33 1.9E-37 295.1 20.6 264 385-660 10-297 (343)
362 cd06618 PKc_MKK7 Catalytic dom 100.0 6.1E-33 1.3E-37 290.3 18.7 253 388-661 13-273 (296)
363 KOG0983 Mitogen-activated prot 100.0 1.1E-33 2.4E-38 269.5 11.6 252 390-661 92-349 (391)
364 cd05606 STKc_beta_ARK Catalyti 100.0 1.7E-32 3.8E-37 284.1 21.3 241 397-660 1-254 (278)
365 KOG0666 Cyclin C-dependent kin 100.0 1.4E-33 3E-38 273.4 12.0 272 387-662 21-338 (438)
366 KOG0696 Serine/threonine prote 100.0 1.4E-33 3.1E-38 282.0 12.2 245 386-654 345-594 (683)
367 cd08222 STKc_Nek11 Catalytic d 100.0 7.2E-33 1.6E-37 283.8 17.5 249 391-660 1-256 (260)
368 cd07857 STKc_MPK1 Catalytic do 100.0 1.2E-32 2.5E-37 293.0 19.7 263 391-660 1-291 (332)
369 KOG4645 MAPKKK (MAP kinase kin 100.0 1.6E-34 3.4E-39 325.0 5.0 254 386-660 1231-1493(1509)
370 KOG1035 eIF-2alpha kinase GCN2 100.0 2.3E-33 5.1E-38 314.2 14.2 254 387-660 476-870 (1351)
371 KOG0612 Rho-associated, coiled 100.0 6.9E-34 1.5E-38 316.0 9.7 259 382-660 67-337 (1317)
372 KOG0607 MAP kinase-interacting 100.0 1.1E-33 2.5E-38 274.7 9.9 253 396-660 84-360 (463)
373 cd07851 STKc_p38 Catalytic dom 100.0 5.4E-33 1.2E-37 296.9 15.7 261 388-660 13-297 (343)
374 KOG0604 MAP kinase-activated p 100.0 5.8E-33 1.3E-37 267.9 12.0 253 388-660 59-321 (400)
375 KOG0671 LAMMER dual specificit 100.0 8.7E-33 1.9E-37 275.9 12.7 265 386-660 85-405 (415)
376 cd05123 STKc_AGC Catalytic dom 100.0 6.2E-32 1.3E-36 275.0 18.1 236 398-657 1-240 (250)
377 cd05610 STKc_MASTL Catalytic d 100.0 2.4E-31 5.3E-36 306.2 22.0 146 389-540 3-152 (669)
378 KOG1151 Tousled-like protein k 100.0 1.6E-32 3.5E-37 276.5 10.3 260 386-660 459-740 (775)
379 KOG1006 Mitogen-activated prot 100.0 1.5E-33 3.3E-38 267.7 1.9 257 390-661 64-327 (361)
380 KOG4236 Serine/threonine prote 100.0 3E-32 6.4E-37 279.8 10.9 264 395-680 569-849 (888)
381 KOG0669 Cyclin T-dependent kin 100.0 3.8E-33 8.2E-38 262.8 1.9 265 390-660 17-314 (376)
382 cd05576 STKc_RPK118_like Catal 100.0 3.8E-31 8.2E-36 267.4 16.4 220 401-656 4-224 (237)
383 KOG0603 Ribosomal protein S6 k 100.0 1.7E-31 3.7E-36 283.7 13.9 239 389-660 321-562 (612)
384 KOG0587 Traf2- and Nck-interac 100.0 6.8E-31 1.5E-35 286.1 18.6 257 383-660 12-281 (953)
385 KOG0695 Serine/threonine prote 100.0 1.5E-31 3.3E-36 261.0 11.8 249 388-653 248-502 (593)
386 PLN03225 Serine/threonine-prot 100.0 1.2E-30 2.5E-35 293.2 20.6 259 388-661 130-450 (566)
387 PLN03224 probable serine/threo 100.0 1.6E-30 3.4E-35 284.8 20.2 261 388-660 143-499 (507)
388 smart00220 S_TKc Serine/Threon 100.0 2.1E-30 4.5E-35 261.5 18.3 238 402-660 1-240 (244)
389 KOG0614 cGMP-dependent protein 100.0 6.6E-32 1.4E-36 276.7 5.1 243 389-654 419-665 (732)
390 KOG0608 Warts/lats-like serine 100.0 2.1E-30 4.6E-35 271.4 14.4 209 386-600 625-878 (1034)
391 KOG0984 Mitogen-activated prot 100.0 2.2E-30 4.8E-35 237.7 9.5 210 384-598 40-257 (282)
392 KOG0664 Nemo-like MAPK-related 100.0 2.9E-31 6.2E-36 252.6 3.3 263 393-662 56-344 (449)
393 KOG1290 Serine/threonine prote 100.0 4.5E-29 9.8E-34 255.6 19.0 263 389-660 77-549 (590)
394 KOG1027 Serine/threonine prote 100.0 7E-30 1.5E-34 277.0 9.5 245 392-660 511-766 (903)
395 KOG0668 Casein kinase II, alph 100.0 4.9E-29 1.1E-33 232.0 11.5 255 389-660 37-321 (338)
396 cd00180 PKc Catalytic domain o 100.0 3.4E-27 7.4E-32 232.1 20.9 210 398-661 1-214 (215)
397 KOG1152 Signal transduction se 99.9 1.5E-28 3.1E-33 256.0 8.5 197 389-594 560-770 (772)
398 KOG0665 Jun-N-terminal kinase 99.9 6.1E-28 1.3E-32 235.9 9.4 261 389-661 16-310 (369)
399 KOG0670 U4/U6-associated splic 99.9 3.9E-28 8.5E-33 249.7 8.2 268 385-660 427-745 (752)
400 smart00221 STYKc Protein kinas 99.9 2.2E-26 4.7E-31 229.7 19.3 199 392-595 1-202 (225)
401 KOG0576 Mitogen-activated prot 99.9 4.6E-28 1E-32 256.3 6.7 255 387-660 12-270 (829)
402 KOG1345 Serine/threonine kinas 99.9 2.5E-27 5.5E-32 226.0 10.1 256 388-664 22-287 (378)
403 KOG1167 Serine/threonine prote 99.9 3.6E-26 7.8E-31 231.9 11.3 265 385-660 31-380 (418)
404 PF13947 GUB_WAK_bind: Wall-as 99.9 1.6E-25 3.5E-30 195.0 10.2 101 13-116 1-106 (106)
405 PLN00181 protein SPA1-RELATED; 99.9 1.2E-25 2.6E-30 265.4 9.4 195 442-660 28-264 (793)
406 smart00750 KIND kinase non-cat 99.9 2.6E-24 5.7E-29 206.7 15.3 170 471-668 1-172 (176)
407 KOG1164 Casein kinase (serine/ 99.9 3.9E-23 8.5E-28 218.1 20.0 262 391-669 19-301 (322)
408 KOG1163 Casein kinase (serine/ 99.9 1.4E-23 3.1E-28 197.3 12.7 267 386-669 11-288 (341)
409 KOG1165 Casein kinase (serine/ 99.9 1E-22 2.2E-27 199.9 18.7 266 387-669 25-303 (449)
410 PRK09188 serine/threonine prot 99.9 7.6E-23 1.6E-27 215.3 16.4 168 384-568 12-195 (365)
411 KOG0195 Integrin-linked kinase 99.9 6.4E-24 1.4E-28 202.6 4.9 252 391-666 191-447 (448)
412 COG0515 SPS1 Serine/threonine 99.9 2.3E-20 5.1E-25 196.5 22.8 261 392-661 2-275 (384)
413 KOG1240 Protein kinase contain 99.9 4.2E-22 9E-27 221.9 6.2 251 391-665 24-295 (1431)
414 KOG0590 Checkpoint kinase and 99.8 5.9E-22 1.3E-26 222.1 7.0 253 393-660 321-584 (601)
415 PRK10359 lipopolysaccharide co 99.8 1.2E-20 2.6E-25 184.7 11.0 173 386-587 27-216 (232)
416 cd05147 RIO1_euk RIO kinase fa 99.8 6.9E-20 1.5E-24 177.4 11.9 139 395-542 2-167 (190)
417 PF14531 Kinase-like: Kinase-l 99.8 9E-20 1.9E-24 183.8 11.1 233 391-652 13-288 (288)
418 KOG1023 Natriuretic peptide re 99.8 1.5E-19 3.3E-24 193.4 13.3 219 440-669 1-228 (484)
419 cd05145 RIO1_like RIO kinase f 99.8 6.6E-19 1.4E-23 171.2 15.2 139 395-543 2-168 (190)
420 KOG1166 Mitotic checkpoint ser 99.8 3.7E-19 7.9E-24 203.1 13.2 202 381-591 689-901 (974)
421 KOG0603 Ribosomal protein S6 k 99.8 6.8E-20 1.5E-24 195.6 4.0 225 397-655 1-232 (612)
422 PRK12274 serine/threonine prot 99.8 2.2E-18 4.8E-23 165.0 13.2 187 393-597 5-211 (218)
423 PRK10345 hypothetical protein; 99.8 1E-17 2.2E-22 163.7 14.9 137 392-539 4-156 (210)
424 KOG1033 eIF-2alpha kinase PEK/ 99.7 7.6E-19 1.6E-23 184.2 3.3 241 392-657 246-508 (516)
425 KOG4158 BRPK/PTEN-induced prot 99.7 6.8E-17 1.5E-21 162.6 11.9 196 444-662 274-511 (598)
426 PRK14879 serine/threonine prot 99.7 2.2E-16 4.7E-21 156.4 14.3 134 396-541 2-143 (211)
427 smart00090 RIO RIO-like kinase 99.7 2.3E-16 5E-21 158.1 13.1 144 389-542 27-198 (237)
428 KOG0606 Microtubule-associated 99.7 2.6E-17 5.5E-22 184.2 5.9 209 389-654 82-305 (1205)
429 cd05144 RIO2_C RIO kinase fami 99.7 5.1E-16 1.1E-20 152.1 14.0 141 387-543 12-176 (198)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 5.8E-16 1.3E-20 151.9 12.7 130 397-541 1-138 (199)
431 PRK09605 bifunctional UGMP fam 99.7 9.1E-16 2E-20 173.1 15.2 137 389-541 332-476 (535)
432 cd05119 RIO RIO kinase family, 99.6 1.7E-14 3.7E-19 140.0 12.3 135 395-542 2-164 (187)
433 cd05120 APH_ChoK_like Aminogly 99.6 3.4E-14 7.3E-19 132.1 13.1 135 394-541 2-138 (155)
434 PRK01723 3-deoxy-D-manno-octul 99.6 5.4E-14 1.2E-18 141.3 15.1 135 395-541 36-191 (239)
435 KOG0590 Checkpoint kinase and 99.5 5.6E-16 1.2E-20 174.1 -1.6 255 388-660 18-285 (601)
436 PF08488 WAK: Wall-associated 99.4 2E-13 4.4E-18 116.1 7.3 98 143-247 1-102 (103)
437 TIGR01982 UbiB 2-polyprenylphe 99.4 2.5E-12 5.3E-17 140.5 14.1 140 396-543 123-308 (437)
438 KOG1266 Protein kinase [Signal 99.4 2.4E-13 5.2E-18 134.4 5.3 202 439-661 120-331 (458)
439 KOG0601 Cyclin-dependent kinas 99.3 8.8E-13 1.9E-17 141.7 6.0 249 389-660 113-378 (524)
440 KOG1243 Protein kinase [Genera 99.3 3.9E-11 8.4E-16 130.2 15.8 166 412-590 35-200 (690)
441 cd05151 ChoK Choline Kinase (C 99.2 3.5E-11 7.5E-16 114.6 10.0 130 395-540 3-135 (170)
442 PRK04750 ubiB putative ubiquin 99.2 9.6E-11 2.1E-15 129.5 12.4 147 387-544 117-316 (537)
443 cd05146 RIO3_euk RIO kinase fa 99.2 6.7E-10 1.5E-14 106.8 14.7 135 396-542 3-174 (197)
444 KOG3741 Poly(A) ribonuclease s 99.1 8.8E-10 1.9E-14 116.0 15.9 168 404-592 290-475 (655)
445 KOG0601 Cyclin-dependent kinas 99.0 1.4E-10 3.1E-15 124.9 5.3 257 379-666 253-519 (524)
446 cd05154 ACAD10_11_like Acyl-Co 99.0 1.4E-09 3.1E-14 108.2 12.1 142 396-541 4-206 (223)
447 COG3642 Mn2+-dependent serine/ 99.0 1.7E-09 3.7E-14 100.2 11.3 131 396-541 2-140 (204)
448 KOG3087 Serine/threonine prote 99.0 6.2E-09 1.3E-13 95.9 13.2 143 394-541 11-165 (229)
449 KOG0606 Microtubule-associated 99.0 8.4E-11 1.8E-15 132.7 0.4 252 385-656 799-1084(1205)
450 COG4248 Uncharacterized protei 98.9 1.2E-08 2.7E-13 104.8 12.1 273 393-678 14-313 (637)
451 PF01163 RIO1: RIO1 family; I 98.9 1.8E-08 3.8E-13 96.6 12.0 125 405-542 1-156 (188)
452 PRK15123 lipopolysaccharide co 98.8 7.4E-08 1.6E-12 98.0 15.4 139 397-540 29-193 (268)
453 COG0478 RIO-like serine/threon 98.6 3.4E-07 7.5E-12 90.1 10.6 134 392-540 93-250 (304)
454 KOG2137 Protein kinase [Signal 98.6 2.1E-08 4.5E-13 109.8 1.9 151 495-660 105-264 (700)
455 PRK09902 hypothetical protein; 98.5 2.1E-06 4.6E-11 82.8 14.4 139 398-541 26-179 (216)
456 PF06293 Kdo: Lipopolysacchari 98.5 1.1E-06 2.4E-11 86.4 12.4 106 430-541 55-170 (206)
457 COG0661 AarF Predicted unusual 98.4 1.5E-06 3.2E-11 95.9 11.2 147 389-544 125-317 (517)
458 PF06176 WaaY: Lipopolysacchar 98.3 8.2E-06 1.8E-10 79.1 11.7 139 386-540 27-182 (229)
459 KOG1219 Uncharacterized conser 98.2 1.3E-06 2.8E-11 104.0 6.5 79 227-306 3871-3965(4289)
460 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.8E-05 3.9E-10 78.8 13.5 138 396-540 7-181 (226)
461 COG1718 RIO1 Serine/threonine 98.1 5.4E-05 1.2E-09 74.2 13.5 151 380-542 35-216 (268)
462 PF01636 APH: Phosphotransfera 98.1 4.4E-05 9.6E-10 76.3 13.2 143 395-540 2-196 (239)
463 PF12260 PIP49_C: Protein-kina 98.0 2.3E-05 4.9E-10 75.5 9.2 104 434-541 7-111 (188)
464 cd05150 APH Aminoglycoside 3'- 98.0 7.6E-05 1.7E-09 75.5 13.0 139 398-540 6-192 (244)
465 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.00018 4E-09 69.6 14.2 129 394-535 5-165 (199)
466 COG2112 Predicted Ser/Thr prot 98.0 5.3E-05 1.1E-09 70.2 9.8 129 392-540 24-154 (201)
467 KOG1235 Predicted unusual prot 98.0 3.6E-05 7.9E-10 84.6 10.3 139 396-544 167-357 (538)
468 KOG0576 Mitogen-activated prot 97.9 8.8E-07 1.9E-11 96.1 -2.6 183 395-594 247-431 (829)
469 PRK09550 mtnK methylthioribose 97.8 0.0013 2.8E-08 70.6 19.6 75 396-472 32-117 (401)
470 PLN02876 acyl-CoA dehydrogenas 97.8 0.00023 5E-09 84.8 14.2 148 395-542 43-258 (822)
471 PRK10593 hypothetical protein; 97.6 0.00072 1.6E-08 70.4 13.3 80 391-473 15-100 (297)
472 cd05155 APH_ChoK_like_1 Unchar 97.6 0.00053 1.1E-08 68.9 11.0 73 396-474 3-82 (235)
473 cd05157 ETNK_euk Ethanolamine 97.6 0.00075 1.6E-08 67.8 12.0 140 396-540 4-200 (235)
474 PF13095 FTA2: Kinetochore Sim 97.6 0.00079 1.7E-08 64.7 11.3 125 390-539 37-206 (207)
475 KOG1035 eIF-2alpha kinase GCN2 97.5 0.00057 1.2E-08 79.8 11.8 196 433-662 229-435 (1351)
476 TIGR02721 ycfN_thiK thiamine k 97.5 0.0006 1.3E-08 69.5 9.9 137 398-540 4-174 (256)
477 cd05156 ChoK_euk Choline Kinas 97.0 0.004 8.6E-08 65.2 10.8 140 396-540 4-212 (302)
478 PRK05231 homoserine kinase; Pr 97.0 0.019 4.2E-07 60.5 15.6 142 395-540 27-216 (319)
479 PF03881 Fructosamin_kin: Fruc 97.0 0.005 1.1E-07 63.4 10.5 75 393-471 20-97 (288)
480 TIGR00938 thrB_alt homoserine 96.9 0.009 1.9E-07 62.7 12.0 143 395-540 27-216 (307)
481 KOG2268 Serine/threonine prote 96.8 0.0018 4E-08 65.7 5.4 134 392-541 94-251 (465)
482 cd05153 HomoserineK_II Homoser 96.7 0.024 5.2E-07 59.0 13.7 142 395-540 19-204 (296)
483 COG3173 Predicted aminoglycosi 96.6 0.018 3.9E-07 59.8 11.5 136 405-541 40-228 (321)
484 cd05152 MPH2' Macrolide 2'-Pho 96.6 0.016 3.4E-07 59.7 10.9 31 511-541 185-216 (276)
485 TIGR01767 MTRK 5-methylthiorib 96.6 0.25 5.5E-06 52.2 19.6 79 397-477 2-92 (370)
486 PLN02236 choline kinase 96.5 0.019 4.1E-07 61.1 11.2 139 397-540 43-230 (344)
487 PRK12396 5-methylribose kinase 96.4 0.11 2.3E-06 55.6 15.6 74 395-470 34-117 (409)
488 KOG1826 Ras GTPase activating 96.3 0.00069 1.5E-08 80.8 -1.0 162 431-593 1274-1440(2724)
489 KOG2270 Serine/threonine prote 96.3 0.031 6.8E-07 58.0 10.8 141 393-542 147-314 (520)
490 PLN02756 S-methyl-5-thioribose 96.1 0.074 1.6E-06 57.1 12.6 80 395-477 37-128 (418)
491 KOG1219 Uncharacterized conser 95.8 0.013 2.8E-07 71.8 5.9 48 231-279 3914-3971(4289)
492 KOG1093 Predicted protein kina 95.6 0.014 3.1E-07 62.9 4.9 50 431-481 27-77 (725)
493 TIGR02906 spore_CotS spore coa 95.4 0.44 9.6E-06 49.8 15.3 28 512-540 188-215 (313)
494 PF01633 Choline_kinase: Choli 95.2 0.034 7.4E-07 54.7 5.8 29 512-540 144-173 (211)
495 PLN02421 phosphotransferase, a 95.0 0.16 3.5E-06 53.8 10.6 139 397-540 21-212 (330)
496 TIGR02904 spore_ysxE spore coa 94.8 0.41 8.8E-06 50.2 12.9 30 512-541 197-226 (309)
497 PF07387 Seadorna_VP7: Seadorn 94.5 0.16 3.5E-06 49.2 7.9 103 416-539 87-190 (308)
498 PF12947 EGF_3: EGF domain; I 94.2 0.027 5.8E-07 37.9 1.4 25 227-252 7-31 (36)
499 COG3001 Uncharacterized protei 93.8 0.81 1.8E-05 44.9 11.2 74 397-474 23-99 (286)
500 PF00008 EGF: EGF-like domain 93.6 0.028 6.1E-07 36.8 0.7 26 227-252 5-30 (32)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-52 Score=443.03 Aligned_cols=292 Identities=46% Similarity=0.757 Sum_probs=259.1
Q ss_pred cccccchHHHHHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEE
Q 005355 376 KTKLFTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCC 455 (700)
Q Consensus 376 ~~~~~~~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 455 (700)
..+.|++.+++.+|++|...++||+|+||.||+|.+.++..||||++.........+|.+|++++.+++|||+|+|+|+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56779999999999999999999999999999999998899999988765443135599999999999999999999999
Q ss_pred EeCC-cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEe
Q 005355 456 LETE-VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVS 534 (700)
Q Consensus 456 ~~~~-~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~ 534 (700)
.+.+ ..+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||....++|+|||||++|||||+++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 9999 499999999999999999987654 69999999999999999999999988889999999999999999999999
Q ss_pred ecCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh
Q 005355 535 DFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE 614 (700)
Q Consensus 535 DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 614 (700)
|||+++..........+...||.+|+|||++..+..+.|+|||||||+|+||++|+.+.+.........+..|+...+..
T Consensus 220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 99999765431222221117999999999999999999999999999999999999998876655566699999999999
Q ss_pred cchhhhcchhhh-hccCH-HHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 615 NRLFEVLDARVL-KEAKE-EEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 615 ~~~~~~~d~~~~-~~~~~-~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
+++.+++|+.+. .+... .+...+..++.+|++.+|++||+|.||+++|+.+...
T Consensus 300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 999999999987 55554 6888899999999999999999999999999666544
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-46 Score=372.90 Aligned_cols=252 Identities=27% Similarity=0.423 Sum_probs=211.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc-ceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEV-PLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~E 466 (700)
++++.++.||+|..|+||+++++ +++.+|+|.+.. .++...+++.+|+++++..+||+||+++|+|..... ..|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 45566689999999999999987 688999999854 456667899999999999999999999999999985 999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||++|+|++++..... +++..+.+++.++++||.|||+ ++ ||||||||+||||+..|++||+|||.+..+...
T Consensus 159 YMDgGSLd~~~k~~g~---i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVGR---IPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hcCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence 9999999999987643 9999999999999999999996 66 999999999999999999999999999876433
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
...+..||..|||||.+.+..|+.++||||||++++|+++|+.||....... ....+ .+. .+++...
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~-~~~~~-Ll~--------~Iv~~pp 299 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY-LDIFE-LLC--------AIVDEPP 299 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC-CCHHH-HHH--------HHhcCCC
Confidence 5667789999999999999999999999999999999999999998652111 11111 111 1222111
Q ss_pred hhccCH-HHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 626 LKEAKE-EEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 626 ~~~~~~-~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+. ..++++..++..||+.||.+||+++|+++.
T Consensus 300 -P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 300 -PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred -CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 12223 367789999999999999999999999873
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-46 Score=389.22 Aligned_cols=264 Identities=35% Similarity=0.553 Sum_probs=217.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC-cceEEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDE--SNIEQFINEVAILSQINHRNVVKLLGCCLETE-VPLLVY 465 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 465 (700)
...+...+.||+|+||+||+|.|+....||||++...+. ...+.|.+|+.+|.+++|||||+++|++.+.. ...+||
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 444555567999999999999998555599999876432 22679999999999999999999999999988 789999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC-cEEEeecCCCccccc
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGASRSVMI 544 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~-~~kl~DfGl~~~~~~ 544 (700)
||+++|+|.++++.. .+..+++..++.++.|||+||.|||+++. |||||||++||||+.++ ++||+|||+++....
T Consensus 120 Ey~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred EeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 999999999999885 33459999999999999999999999984 89999999999999997 999999999986543
Q ss_pred CCceeeeeeecccccccccccc--cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFR--SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~--~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
.. ...+...||+.|||||++. ...++.|+||||||++||||++|+.||......+. +......+.
T Consensus 197 ~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~------~~~v~~~~~------ 263 (362)
T KOG0192|consen 197 SK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQV------ASAVVVGGL------ 263 (362)
T ss_pred cc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHH------HHHHHhcCC------
Confidence 22 2233367999999999999 56999999999999999999999999986654221 111111111
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcCC
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGD 671 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~~ 671 (700)
....+...+..+..|+.+||..||..||++.+++..|+.+......
T Consensus 264 ---Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 264 ---RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred ---CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 1222333667889999999999999999999999999999876553
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-46 Score=389.60 Aligned_cols=262 Identities=30% Similarity=0.457 Sum_probs=224.7
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
.++....++..+.||+|-||.||.|.++....||+|.++.... ..+.|.+|+++|++|+|+|||++++++..++..+||
T Consensus 201 wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 201 WEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred eeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEE
Confidence 3444555667789999999999999999778999999886533 347899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
||||+.|+|.++|+.. .+..+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+||||++....
T Consensus 280 tE~m~~GsLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d 355 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGD 355 (468)
T ss_pred EEecccCcHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCC
Confidence 9999999999999973 2334899999999999999999999999 99999999999999999999999999996655
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
+.........-+..|+|||.+....++.|||||||||+||||+| |+.|+......+ +.+.++.+
T Consensus 356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-------v~~~le~G-------- 420 (468)
T KOG0197|consen 356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-------VLELLERG-------- 420 (468)
T ss_pred CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-------HHHHHhcc--------
Confidence 66656666667789999999999999999999999999999999 889987766544 23333332
Q ss_pred hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 624 RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 624 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
..-..+...+..+.+|+..||..+|++|||++.+...|+.+..
T Consensus 421 -yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 421 -YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred -CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 2233456678899999999999999999999999999988754
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-44 Score=381.71 Aligned_cols=247 Identities=25% Similarity=0.421 Sum_probs=215.0
Q ss_pred cCCCccceEeeeCCeEEEEEEE-cCCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGML-TNGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
.+|...+.||+|||+.+|+++. ..|+.||+|++.. ......+.+.+|++|.++|+|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 6789999999999999999997 6899999998764 44566789999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
|++.+++|..++++. +++++.++..+++||+.||.|||+++ |+|||||..|+||+++.+|||+|||||..+..+
T Consensus 98 ELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999999843 35999999999999999999999999 999999999999999999999999999877544
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
.+...+.+||+.|+|||++.....+..+||||+|||||-||.|++||+...-.+ ....++....
T Consensus 172 -~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke-------ty~~Ik~~~Y-------- 235 (592)
T KOG0575|consen 172 -GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE-------TYNKIKLNEY-------- 235 (592)
T ss_pred -ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH-------HHHHHHhcCc--------
Confidence 344567889999999999999999999999999999999999999997654333 2222222221
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+...+.+..+||.++|+.+|.+|||+++|+.
T Consensus 236 --~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 236 --SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred --ccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 123345567889999999999999999999997
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-44 Score=362.17 Aligned_cols=249 Identities=28% Similarity=0.435 Sum_probs=204.5
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
..+|...+.||+|.|++||+|+++ ++..||||.+... .....+.+..|+++|+.++|||||++++++...+..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 467888889999999999999976 6789999987654 6677788999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC------CcEEEeecCCC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK------YRAKVSDFGAS 539 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~------~~~kl~DfGl~ 539 (700)
||+.+|+|.+||+.... +++..+..++.||+.||++||+++ ||||||||.||||+.. ..+||+|||++
T Consensus 89 EyC~gGDLs~yi~~~~~---l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRGR---LPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999999998754 999999999999999999999999 9999999999999764 56999999999
Q ss_pred cccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 540 RSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 540 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
+.+. ......+.+|++-|||||++...+|+.|+|+||+|+|||+|++|+.||......|-. ..++.+.
T Consensus 163 R~L~--~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~-------~~~~k~~--- 230 (429)
T KOG0595|consen 163 RFLQ--PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELL-------LYIKKGN--- 230 (429)
T ss_pred hhCC--chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHH-------HHHhccc---
Confidence 9774 444566788999999999999999999999999999999999999999876655421 1222211
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAA 659 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl 659 (700)
.+....+......+.+|+...++.+|.+|-+..+-.
T Consensus 231 ----~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~ 266 (429)
T KOG0595|consen 231 ----EIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFF 266 (429)
T ss_pred ----cccCchhhhccCchhhhhhHHHhcCccccCchHHhh
Confidence 111112222333344566666666666666554443
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-45 Score=365.36 Aligned_cols=253 Identities=26% Similarity=0.360 Sum_probs=209.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-------hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-------ESNIEQFINEVAILSQINHRNVVKLLGCCLETE 459 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 459 (700)
..+.|.+.+.||+|+||.|-+|..+ +++.||||+++... ........+|+++|++|+|||||++++++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4567888999999999999999965 79999999876421 112334679999999999999999999999999
Q ss_pred cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC---CcEEEeec
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK---YRAKVSDF 536 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~---~~~kl~Df 536 (700)
..||||||+++|+|.+.+-.+.. +.+..-..+++|++.|+.|||++| |+||||||+|||+..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEeccc
Confidence 99999999999999999987654 778888899999999999999999 9999999999999765 78999999
Q ss_pred CCCcccccCCceeeeeeecccccccccccccCCC---CcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH
Q 005355 537 GASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQF---TEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613 (700)
Q Consensus 537 Gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 613 (700)
|+++... ....+.+.+||+.|.|||++.+... ..|+|+||+||+||-+|+|.+||.....+. . +.+.+.
T Consensus 324 GlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--s----l~eQI~ 395 (475)
T KOG0615|consen 324 GLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--S----LKEQIL 395 (475)
T ss_pred chhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--c----HHHHHh
Confidence 9998654 5567788999999999999977543 358899999999999999999997654332 1 223333
Q ss_pred hcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 614 ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 614 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.+++... .....+..++..+||.+||..||++|||+.|+++
T Consensus 396 ~G~y~f~------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 396 KGRYAFG------PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cCccccc------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 3433211 1123456678889999999999999999999987
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.4e-45 Score=396.67 Aligned_cols=271 Identities=28% Similarity=0.464 Sum_probs=234.7
Q ss_pred hHHHHHHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeE
Q 005355 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGC 454 (700)
Q Consensus 382 ~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~ 454 (700)
....+..+.+.+..+.||+|.||+||+|+.. +...||||.++..... ..++|++|++++..++|||||+|+|+
T Consensus 478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGV 557 (774)
T KOG1026|consen 478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGV 557 (774)
T ss_pred cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence 3445667788888999999999999999954 2457999999986665 78999999999999999999999999
Q ss_pred EEeCCcceEEEeeCCCCCHHHHHhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcE
Q 005355 455 CLETEVPLLVYEFIPNGTLYQYIHDQTE-----------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANI 523 (700)
Q Consensus 455 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NI 523 (700)
|.+++..++|+|||..|+|.+||+.... ..+|+..+.+.||.|||.||.||-++. +|||||..+|+
T Consensus 558 C~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNC 634 (774)
T KOG1026|consen 558 CREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNC 634 (774)
T ss_pred EccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhc
Confidence 9999999999999999999999975422 224889999999999999999999999 99999999999
Q ss_pred EECCCCcEEEeecCCCcccccCCceeee-eeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhh
Q 005355 524 LLDDKYRAKVSDFGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEED 601 (700)
Q Consensus 524 Ll~~~~~~kl~DfGl~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~ 601 (700)
||.++..|||+||||++.....+++... ...-+.+||+||.+..+++|.+||||||||+|||+++ |+.||.+...+|
T Consensus 635 LVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E- 713 (774)
T KOG1026|consen 635 LVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE- 713 (774)
T ss_pred eeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-
Confidence 9999999999999999988766555443 5567889999999999999999999999999999999 999998877665
Q ss_pred hhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcCC
Q 005355 602 KSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGD 671 (700)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~~ 671 (700)
+++.+..+++. +.+...+.++.+|+..||+.+|++||+++||-..|+..-+....
T Consensus 714 ------VIe~i~~g~lL---------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 714 ------VIECIRAGQLL---------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred ------HHHHHHcCCcc---------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 45566666552 33556778999999999999999999999999999887655443
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.8e-45 Score=346.40 Aligned_cols=259 Identities=26% Similarity=0.395 Sum_probs=212.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEE-cCCcEEEEEEcc--ccChhhHHHHHHHHHHHhhcCCCceeeEEe-EEEeCCc-ceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGML-TNGRIVAIKKSK--LVDESNIEQFINEVAILSQINHRNVVKLLG-CCLETEV-PLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~l 463 (700)
..+|++.++||+|.||+||++.. .+|..||.|.++ ..+....++...|+.+|++|+|||||++++ .+.+++. ..|
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 35678889999999999999995 489999999866 456667888999999999999999999998 4555555 789
Q ss_pred EEeeCCCCCHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 464 VYEFIPNGTLYQYIHDQTE-EFPITWEIRLRIAIEVSDALCYLHSAAS-IPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~-~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
|||++..|+|...++..+. +..+++..+++++.|++.||.++|+.-+ ..|+||||||.||+|+.+|.|||+||||++.
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999999999987543 3458999999999999999999998221 1289999999999999999999999999997
Q ss_pred cccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 542 VMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 542 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
+... .......+|||.||+||.+.+..|+.||||||+||++|||..-+.||.+.+-.+ +...++++....+.
T Consensus 178 l~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~-------L~~KI~qgd~~~~p 249 (375)
T KOG0591|consen 178 LSSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS-------LCKKIEQGDYPPLP 249 (375)
T ss_pred hcch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH-------HHHHHHcCCCCCCc
Confidence 6433 334556789999999999999999999999999999999999999998763222 33445555432221
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
+ .-++.++.+||..|+..||+.||+...+++.+.
T Consensus 250 ~--------~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 250 D--------EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred H--------HHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 1 456778999999999999999999655555443
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-43 Score=349.56 Aligned_cols=243 Identities=28% Similarity=0.423 Sum_probs=207.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
..++|+++++||+|+||+|+.++.+ .++.+|+|.++. ......+....|..+|.+++||.||+++-.|++.+.+||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 4678999999999999999999965 588999998764 344567888999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
|+||+.||.|..+|.+... +++..+..++.+|+.||.|||+++ ||||||||+|||||.+|+++|+||||++...
T Consensus 103 Vld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 9999999999999987654 999999999999999999999999 9999999999999999999999999998653
Q ss_pred cCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
.. .....+.+||+.|||||++.+..|+..+|.||||+++|||++|.+||...+..+ ..+.+..+++
T Consensus 177 ~~-~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~-------~~~~I~~~k~------ 242 (357)
T KOG0598|consen 177 KD-GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK-------MYDKILKGKL------ 242 (357)
T ss_pred cC-CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH-------HHHHHhcCcC------
Confidence 33 334455789999999999999999999999999999999999999998766433 2222222221
Q ss_pred hhhhccCHHHHHHHHHHHHHHhccCCCCCC
Q 005355 624 RVLKEAKEEEIITVAMLAKRCLNMIGKKRP 653 (700)
Q Consensus 624 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RP 653 (700)
...+.-...+..+++.++|..+|++|.
T Consensus 243 ---~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 243 ---PLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ---CCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 112222455788899999999999996
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.8e-42 Score=334.17 Aligned_cols=264 Identities=24% Similarity=0.341 Sum_probs=211.1
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE--SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
+.|+.+.++|+|+||.||+.+.+ .|+.||||++...++ .-.+-..+|+++|++++|+|+|.++++|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46778889999999999999977 699999999876443 334567899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|++.. +.+-|.+...+ ++.+.+..++.|+++|+.|+|+++ ++||||||+||||+.++.+||+|||+|+.+.. .
T Consensus 82 ~~dhT-vL~eLe~~p~G--~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-p 154 (396)
T KOG0593|consen 82 YCDHT-VLHELERYPNG--VPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA-P 154 (396)
T ss_pred ecchH-HHHHHHhccCC--CCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC-C
Confidence 99764 44455555443 899999999999999999999999 99999999999999999999999999998754 3
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHH--------HHHHHHhcch
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY--------FLEAMKENRL 617 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~ 617 (700)
....+..+.|.+|.|||.+.+ .+|...+||||+||++.||++|.+.|.+...-+...++.. ..+....+.+
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 444556678999999999887 7899999999999999999999999987765443222211 1122222222
Q ss_pred h------hhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 F------EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ~------~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+ +.-+.+..+..-+....-+.+|++.||..||.+|++-++++.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1 222222222233444556899999999999999999999885
No 12
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=343.97 Aligned_cols=273 Identities=24% Similarity=0.355 Sum_probs=216.4
Q ss_pred HHHHHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhh--cCCCceeeEEeEEEeCC-
Q 005355 383 MELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ--INHRNVVKLLGCCLETE- 459 (700)
Q Consensus 383 ~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~- 459 (700)
...+....+.++.+.||+|.||.||+|.|+ |+.||||++...++ +.+++|.+|++. |+|+||+.+++.-..++
T Consensus 204 LVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g 279 (513)
T KOG2052|consen 204 LVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNG 279 (513)
T ss_pred HhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence 445566788999999999999999999998 89999999987655 558999999987 59999999999876543
Q ss_pred ---cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHH-----hcCCCCeeecCCCCCcEEECCCCcE
Q 005355 460 ---VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLH-----SAASIPIYHRDIKSANILLDDKYRA 531 (700)
Q Consensus 460 ---~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-----~~~~~~ivH~Dik~~NILl~~~~~~ 531 (700)
+++||.+|.+.|||.|||.+.. ++.+..++++..+|.||+||| .+|+|.|.|||||++|||+..++..
T Consensus 280 s~TQLwLvTdYHe~GSL~DyL~r~t----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 280 SWTQLWLVTDYHEHGSLYDYLNRNT----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred ceEEEEEeeecccCCcHHHHHhhcc----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 5689999999999999998754 999999999999999999999 4788999999999999999999999
Q ss_pred EEeecCCCcccccCCce---eeeeeecccccccccccccCC------CCcccceehHHHHHHHHHhC----------CCC
Q 005355 532 KVSDFGASRSVMIDQTH---LTTRVQGTFGYLDPEYFRSSQ------FTEKSDVYSFGVVLVELLTG----------QKP 592 (700)
Q Consensus 532 kl~DfGl~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~s~ksDVwSlG~il~elltg----------~~p 592 (700)
.|+|+||+.....+... .....+||.+|||||++.+.- .-..+||||||+++||+.-. +.|
T Consensus 356 ~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 356 CIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred EEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 99999999866544322 234467999999999997642 22479999999999999862 466
Q ss_pred CCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 593 IRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
|...-+.+ ...+.+.+..-..++...+..+ ....+....+.+|++.||..+|..|.|+-.+.+.|.++.+.
T Consensus 436 yyd~Vp~D--Ps~eeMrkVVCv~~~RP~ipnr---W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 436 YYDVVPSD--PSFEEMRKVVCVQKLRPNIPNR---WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS 506 (513)
T ss_pred cccCCCCC--CCHHHHhcceeecccCCCCCcc---cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence 65433211 1112222222223333322222 23456788899999999999999999999999999888753
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-42 Score=351.98 Aligned_cols=266 Identities=26% Similarity=0.342 Sum_probs=213.3
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--CcceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVPLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 463 (700)
.+.|+.+++||+|+||.||+|+.. +|+.||+|++.... +.......+||.||++|+||||++|.+...+. ...||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 466788899999999999999954 79999999877544 55567778999999999999999999999877 67899
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
|+|||+. +|.-++....- .+++.++..++.||+.||.|+|+++ |+|||||..|||||.+|.+||+||||++.+.
T Consensus 196 VFeYMdh-DL~GLl~~p~v--kft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGV--KFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcCCCc--ccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999965 88888876433 3999999999999999999999999 9999999999999999999999999999877
Q ss_pred cCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchh----
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF---- 618 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---- 618 (700)
.......+..+.|++|.|||.+.+ ..|+.++|+||.||||.||+.|++.|.+..+.+....+-.+--...+..|.
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 776666777889999999999887 579999999999999999999999999877554332221111101111111
Q ss_pred ---hhcch-----hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 619 ---EVLDA-----RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 619 ---~~~d~-----~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+.+ +...+.-...+....+|+..+|..||.+|.|+.++++
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 01110 1111112233456888999999999999999999886
No 14
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-42 Score=357.50 Aligned_cols=250 Identities=26% Similarity=0.407 Sum_probs=217.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
...|...++||+|..|.||.|... .++.||||++........+-+++|+.+|+..+|+|||.+++.+...+..|+||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 456777889999999999999954 6889999999988777888899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
|++|+|.|.+.... +++.++..|.+++++||+|||.++ |+|||||.+|||++.++.+||+|||++..+.....
T Consensus 352 m~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred cCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 99999999998765 999999999999999999999999 99999999999999999999999999987755544
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
...+.+||+.|||||++....|..|.||||||++++||+-|++||-..++.. ++..+..+-..++
T Consensus 425 -KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr-------AlyLIa~ng~P~l------- 489 (550)
T KOG0578|consen 425 -KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALYLIATNGTPKL------- 489 (550)
T ss_pred -ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH-------HHHHHhhcCCCCc-------
Confidence 4556779999999999999999999999999999999999999997644332 2222222221111
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+...+..+.+++.+||+.|+++||+++|+|+
T Consensus 490 k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 490 KNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 223456678999999999999999999999998
No 15
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=382.91 Aligned_cols=274 Identities=27% Similarity=0.483 Sum_probs=228.2
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcC--Cc----EEEEEEccc-cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTN--GR----IVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKLLGCCLETE 459 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~----~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 459 (700)
....+.+..+.||+|.||.||+|...+ +. .||||.++. .+.+...+|.+|..+|+.++|||||+++|++.+..
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 346677888999999999999999653 33 489998875 45677899999999999999999999999999999
Q ss_pred cceEEEeeCCCCCHHHHHhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEee
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTE----EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~D 535 (700)
.++|++|||++|+|..||++.+. ...++...++.++.|||+|+.||++++ +|||||..+|+||++...|||+|
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcc
Confidence 99999999999999999998622 235899999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccccCCceeeee-eecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHH
Q 005355 536 FGASRSVMIDQTHLTTR-VQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMK 613 (700)
Q Consensus 536 fGl~~~~~~~~~~~~~~-~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 613 (700)
||+++.+...+.+.... ..-+..|||||.+..+.++.|+|||||||+|||+++ |..||...+..+. +....+
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v------~~~~~~ 919 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV------LLDVLE 919 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH------HHHHHh
Confidence 99999665444443332 244569999999999999999999999999999999 8999987665442 222333
Q ss_pred hcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcCCCccCCCCC
Q 005355 614 ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHNCD 679 (700)
Q Consensus 614 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~~~~~~~~~~ 679 (700)
.+++ +.+..++..+.+|+..||+.+|++||++..+++.++.+.+.+.......-.+
T Consensus 920 ggRL----------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~~~~~a 975 (1025)
T KOG1095|consen 920 GGRL----------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIYGPLPA 975 (1025)
T ss_pred CCcc----------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCccccccc
Confidence 3332 3355677789999999999999999999999999999887665555444333
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=337.81 Aligned_cols=265 Identities=25% Similarity=0.365 Sum_probs=215.1
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
.....+.|++.+.||.|.-++||+|+.. .++.||||++.... ....+.+++|+..|+.++||||++.+..|..++..|
T Consensus 21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LW 100 (516)
T KOG0582|consen 21 FPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELW 100 (516)
T ss_pred CCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeE
Confidence 3445688999999999999999999954 67999999988643 333688999999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+||.||.+|++.++++..-..+ +++..+..|++++++||.|||++| .||||||+.||||+.+|.|||+|||.+..+
T Consensus 101 vVmpfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 101 VVMPFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred EeehhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeee
Confidence 9999999999999998764433 999999999999999999999999 999999999999999999999999988766
Q ss_pred ccCCce---eeeeeeccccccccccccc--CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcch
Q 005355 543 MIDQTH---LTTRVQGTFGYLDPEYFRS--SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRL 617 (700)
Q Consensus 543 ~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (700)
...... ......||+.|||||++.. ..|+.|+||||||++..||.+|..||....+.+. +...+ ++..
T Consensus 177 ~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv------Ll~tL-qn~p 249 (516)
T KOG0582|consen 177 FDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV------LLLTL-QNDP 249 (516)
T ss_pred cccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH------HHHHh-cCCC
Confidence 443222 1245689999999999543 5799999999999999999999999987655431 11111 2222
Q ss_pred hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
....-..+..+........+.+++..||+.||++|||+++++.
T Consensus 250 p~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 250 PTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1111111122223344557999999999999999999999886
No 17
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.7e-41 Score=319.36 Aligned_cols=265 Identities=26% Similarity=0.288 Sum_probs=211.5
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChh--hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDES--NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++|...++||+|.||.||+|++. .|+.||||+++..+.. -.....+|++.|+.++|+||+.++++|...+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46788899999999999999965 7999999998865433 24567899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|| ..+|...|++... .++..++..++.++++||+|||++. |+||||||.|+||+.+|.+||+|||+++.+....
T Consensus 82 fm-~tdLe~vIkd~~i--~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FM-PTDLEVVIKDKNI--ILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ec-cccHHHHhccccc--ccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 99 5699999987654 4899999999999999999999999 9999999999999999999999999999876544
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh---hcc
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE---VLD 622 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d 622 (700)
... +..+.|..|.|||.+.+ ..|+..+||||.|||+.||+-|.+-|.+..+-+....+-..+.......|.+ +.|
T Consensus 156 ~~~-~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 156 RIQ-THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred ccc-ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 333 33368999999999877 5699999999999999999999988887765443222221111111222211 111
Q ss_pred hh--------hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 623 AR--------VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 623 ~~--------~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
-. .....-.....+..+|+.+||..||.+|++++|++++
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11 1111223445667999999999999999999999874
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-42 Score=348.39 Aligned_cols=267 Identities=26% Similarity=0.350 Sum_probs=211.9
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChh-hHHHHHHHHHHHhhcC-CCceeeEEeEEEeCC-cce
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDES-NIEQFINEVAILSQIN-HRNVVKLLGCCLETE-VPL 462 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~ 462 (700)
...++|.++++||.|+||.||+|+-. .++.||||+++..-.. +.-.=++|+..|++|+ ||||+++.+++.+.+ .++
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 34678999999999999999999954 6899999998753322 2233468999999998 999999999999988 999
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+||||| ..+|.+++++. +..+++..+..|+.||++||+|+|++| +.|||+||+|||+..+..+||+|||+++..
T Consensus 87 fVfE~M-d~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 87 FVFEFM-DCNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eeHHhh-hhhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccc
Confidence 999999 56999999887 456999999999999999999999999 999999999999999889999999999976
Q ss_pred ccCCceeeeeeecccccccccccc-cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcch----
Q 005355 543 MIDQTHLTTRVQGTFGYLDPEYFR-SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRL---- 617 (700)
Q Consensus 543 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---- 617 (700)
.... ..+..+.|.+|+|||++. ..-|+.+.|||++|||++|+.+-++.|.+.++.+....+..++..-....+
T Consensus 161 ~Skp--PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 161 RSKP--PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred ccCC--CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHH
Confidence 4332 345566899999999874 567999999999999999999999999887754433222222111111111
Q ss_pred --hhhcch-------hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 618 --FEVLDA-------RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 618 --~~~~d~-------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+.- .-....-.....+.++|+.+||++||.+|||++|++++
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 111111 11111223367789999999999999999999999984
No 19
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-41 Score=343.00 Aligned_cols=255 Identities=30% Similarity=0.462 Sum_probs=207.6
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC--cceEEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETE--VPLLVY 465 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 465 (700)
..++...+.||+|.||.||++... +|+..|||.....+....+.+.+|+.+|++++|||||+.+|.....+ ...++|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 456778899999999999999976 48999999877654444677999999999999999999999855444 588999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC-CCcEEEeecCCCccccc
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGASRSVMI 544 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~-~~~~kl~DfGl~~~~~~ 544 (700)
||+++|+|.+++.+... .+++..+..+++||++||+|||+++ |+|+||||+||||+. ++.+||+|||+++....
T Consensus 96 Ey~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 99999999999998764 4999999999999999999999999 999999999999999 79999999999987653
Q ss_pred --CCceeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 545 --DQTHLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 545 --~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
..........||+.|||||++... ....++|||||||++.||+||+.||... .............+
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~------ 239 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGRED------ 239 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccC------
Confidence 222234457799999999999863 3335999999999999999999999753 11111111111111
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
.....+...+.+..+++.+|++.+|++|||++++++..
T Consensus 240 ---~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 240 ---SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred ---CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 11133444666788999999999999999999999865
No 20
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-41 Score=321.76 Aligned_cols=237 Identities=28% Similarity=0.398 Sum_probs=205.6
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
.++|+.++.||.|+||+|.+++.+ +|..+|+|+++.. ...+.+...+|..+|+.+.||.++++++.+.+.+..+||
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 357888899999999999999976 6889999988753 345567788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|||+++|.|..++++..+ +++..+..+|.||+.||+|||+.+ |++|||||+|||||.+|.+||+|||+++...
T Consensus 123 meyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~- 195 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVS- 195 (355)
T ss_pred EeccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEec-
Confidence 999999999999998654 999999999999999999999999 9999999999999999999999999998763
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
....+.+||+.|+|||+++...+..++|.|+|||++|||+.|.+||...++.. ..+.+-++++
T Consensus 196 ---~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~-------iY~KI~~~~v------- 258 (355)
T KOG0616|consen 196 ---GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ-------IYEKILEGKV------- 258 (355)
T ss_pred ---CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH-------HHHHHHhCcc-------
Confidence 23667899999999999999999999999999999999999999998776532 1222222222
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCC
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKR 652 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~R 652 (700)
.++.-....+.+|+..+|+.|-.+|
T Consensus 259 ---~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 259 ---KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ---cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 2344455678899999999998888
No 21
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-41 Score=353.99 Aligned_cols=271 Identities=25% Similarity=0.453 Sum_probs=220.3
Q ss_pred cchHHHHHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 005355 380 FTSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLE 457 (700)
Q Consensus 380 ~~~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 457 (700)
....++++..+.+.+.+.||+|.||+||+|.|.. .||||+++.. .++..+.|++|+.+|++-+|.||+-+.|++..
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 3457788889999999999999999999999863 5999998764 45578899999999999999999999999999
Q ss_pred CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 458 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
... .||+.++++-+|+.+|+....+ +.....+.||+||++||.|||.++ |||||||.+||+|.++++|||+|||
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~etk--fdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQETK--FDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred Cce-eeeehhccCchhhhhccchhhh--hhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEeccc
Confidence 888 9999999999999999987644 888999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccC-Cceeeeeeeccccccccccccc---CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH
Q 005355 538 ASRSVMID-QTHLTTRVQGTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613 (700)
Q Consensus 538 l~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 613 (700)
|+..-..- ........-|...|||||+++. .+|+..+||||||+++|||++|..||.....+.. +-+.-
T Consensus 534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI-------ifmVG 606 (678)
T KOG0193|consen 534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI-------IFMVG 606 (678)
T ss_pred ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe-------EEEec
Confidence 98743211 1111222347788999999854 5799999999999999999999999984433321 11111
Q ss_pred hcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcC
Q 005355 614 ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670 (700)
Q Consensus 614 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~ 670 (700)
.+.+. +++ .......+.++.+|+..||..++++||.+.+|+..|+.+..++.
T Consensus 607 rG~l~----pd~-s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~p 658 (678)
T KOG0193|consen 607 RGYLM----PDL-SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLP 658 (678)
T ss_pred ccccC----ccc-hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccc
Confidence 11111 111 11224456789999999999999999999999999988877543
No 22
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-41 Score=346.15 Aligned_cols=253 Identities=29% Similarity=0.388 Sum_probs=213.5
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCc
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEV 460 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 460 (700)
....++|...+.||+|+|++|++|+.. .++.+|||++.. ..+...+-+..|-.+|.+| .||.|++|+-.|.++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 444678999999999999999999965 689999998764 2344456678899999999 89999999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
+|+|+||.++|+|.++|++... +++.....++.||+.||+|||++| ||||||||+|||||+++++||+|||-++
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gs---fde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGS---FDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccc
Confidence 9999999999999999998754 999999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCce----------e--eeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH
Q 005355 541 SVMIDQTH----------L--TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF 608 (700)
Q Consensus 541 ~~~~~~~~----------~--~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 608 (700)
.+...... . ....+||..|.+||++.....+..+|+|+||||||+|+.|.+||.+.++.- .|
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl------iF 296 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL------IF 296 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH------HH
Confidence 77532211 1 144789999999999999999999999999999999999999998765321 12
Q ss_pred HHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 609 LEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 609 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+. - .-+++...++.+.+|+++.|..||.+|++.++|-+.
T Consensus 297 qkI~~---------l--~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 297 QKIQA---------L--DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHHH---------h--cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 11111 1 113344455678899999999999999999888774
No 23
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.1e-40 Score=353.48 Aligned_cols=264 Identities=28% Similarity=0.461 Sum_probs=209.5
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCceeeEEeEEEe
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQI-NHRNVVKLLGCCLE 457 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 457 (700)
.+..++|++.++||+|+||.||+|.+. .++.||||+++... ....+.+.+|+.++..+ +||||+++++++..
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 345678999999999999999999742 35689999987532 33456789999999999 89999999998876
Q ss_pred CC-cceEEEeeCCCCCHHHHHhccCC------------------------------------------------------
Q 005355 458 TE-VPLLVYEFIPNGTLYQYIHDQTE------------------------------------------------------ 482 (700)
Q Consensus 458 ~~-~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------------------ 482 (700)
.+ ..++||||+++|+|.+++.....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 54 56899999999999999975321
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce-eeeeeecc
Q 005355 483 -----EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH-LTTRVQGT 556 (700)
Q Consensus 483 -----~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~gt 556 (700)
..++++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++........ ......++
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~ 239 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCC
Confidence 124788899999999999999999999 999999999999999999999999999865332221 12223456
Q ss_pred cccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHH
Q 005355 557 FGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEII 635 (700)
Q Consensus 557 ~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 635 (700)
..|+|||++.+..++.++||||||++||||++ |..||......+. +...+..+... ..+...+.
T Consensus 240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~------~~~~~~~~~~~---------~~~~~~~~ 304 (338)
T cd05102 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE------FCQRLKDGTRM---------RAPENATP 304 (338)
T ss_pred ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH------HHHHHhcCCCC---------CCCCCCCH
Confidence 78999999999999999999999999999997 9999976543221 11222222111 11223345
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 636 TVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 636 ~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
.+.+|+.+||+.+|++|||+.|++++|+++..
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 78899999999999999999999999998754
No 24
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=362.74 Aligned_cols=261 Identities=24% Similarity=0.417 Sum_probs=220.5
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEcC----CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEV 460 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 460 (700)
++......+.++||.|.||.|++|.++- ...||||.++.. .+.++.+|+.|+.||.++.||||++|.|+......
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P 704 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP 704 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence 3345566788999999999999999862 357999999974 45677899999999999999999999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.+||.|||++|+|+.||+.+..+ +++.++.-+++.|+.||.||.+.+ +|||||.++|||++.+...||+||||++
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGq--ftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSR 779 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSR 779 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCc--eEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEecccccee
Confidence 99999999999999999987654 899999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCceeeeee--ecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcch
Q 005355 541 SVMIDQTHLTTRV--QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRL 617 (700)
Q Consensus 541 ~~~~~~~~~~~~~--~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (700)
.+..+.....+.. .-+.+|.|||.+...+++.+|||||||++|||.++ |+.||-.....+ .+..++++
T Consensus 780 vledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-------VIkaIe~g-- 850 (996)
T KOG0196|consen 780 VLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------VIKAIEQG-- 850 (996)
T ss_pred ecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH-------HHHHHHhc--
Confidence 7654432222222 23569999999999999999999999999999877 999987655443 22333322
Q ss_pred hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 618 FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 618 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
..-..+.+.+..|.+|++.||++|-.+||.+.+|+..|+++..
T Consensus 851 -------yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 851 -------YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred -------cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 2223355677889999999999999999999999999999764
No 25
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-40 Score=335.34 Aligned_cols=271 Identities=25% Similarity=0.372 Sum_probs=206.2
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhh--cCCCceeeEEeEEEeCC----cce
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ--INHRNVVKLLGCCLETE----VPL 462 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 462 (700)
....++.++||+|+||.||+|+++ ++.||||++. ....+.|.+|-+|++. |+|+||+++++.-.... .++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 345566788999999999999997 6999999987 4556779999999887 58999999999876555 789
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh------cCCCCeeecCCCCCcEEECCCCcEEEeec
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS------AASIPIYHRDIKSANILLDDKYRAKVSDF 536 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~------~~~~~ivH~Dik~~NILl~~~~~~kl~Df 536 (700)
||+||.+.|+|.++|+.+. ++|....+++..+++||+|||. +.+++|+|||||++||||..|++..|+||
T Consensus 285 LVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred EEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 9999999999999999876 9999999999999999999996 34678999999999999999999999999
Q ss_pred CCCcccccCCce-eeeeeecccccccccccccCC-CC-----cccceehHHHHHHHHHhCCCCCCCCCchhh--------
Q 005355 537 GASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQ-FT-----EKSDVYSFGVVLVELLTGQKPIRSTDSEED-------- 601 (700)
Q Consensus 537 Gl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-~s-----~ksDVwSlG~il~elltg~~p~~~~~~~~~-------- 601 (700)
||+..+...... .....+||.+|||||++.+.- +. .+.||||+|++||||++.-..+......+-
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev 440 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV 440 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence 999887644322 233467999999999997642 22 368999999999999997554431111110
Q ss_pred --hhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcC
Q 005355 602 --KSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670 (700)
Q Consensus 602 --~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~ 670 (700)
....+.+....-..+.+..+..... ....+..+.+.+..||..|++.|.|+.=+.+.+.++.....
T Consensus 441 G~hPt~e~mq~~VV~kK~RP~~p~~W~---~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 441 GNHPTLEEMQELVVRKKQRPKIPDAWR---KHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred cCCCCHHHHHHHHHhhccCCCChhhhh---cCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 0011111111111111111111111 12456678999999999999999999999888877765443
No 26
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-41 Score=347.25 Aligned_cols=257 Identities=28% Similarity=0.480 Sum_probs=214.8
Q ss_pred HHHHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 384 e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
.+++..+.+..++-||.|+.|.||+|++. ++.||||+.+... ..+|+.|++|+|+||+.|.|+|...--++|
T Consensus 118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCI 189 (904)
T KOG4721|consen 118 LWEIPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCI 189 (904)
T ss_pred hccCCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEE
Confidence 34555666677789999999999999997 7899999876432 246788999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
||||+..|.|..+|+..+ +++...+..|..+||.||.|||.+. |||||||.-||||+.+..|||+|||-++...
T Consensus 190 iMEfCa~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 190 IMEFCAQGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred eeeccccccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhh
Confidence 999999999999998765 3899999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
.. ...-.+.||..|||||++.+.+.++|+|||||||+|||||||..||...+.... +..+-..
T Consensus 264 ~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---------------IwGVGsN 326 (904)
T KOG4721|consen 264 DK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---------------IWGVGSN 326 (904)
T ss_pred hh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee---------------EEeccCC
Confidence 33 223346799999999999999999999999999999999999999976543221 1111111
Q ss_pred hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcCC
Q 005355 624 RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGD 671 (700)
Q Consensus 624 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~~ 671 (700)
.+.-..+...+..+.-|+++||+..|..||++++++..|+-..+.+..
T Consensus 327 sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~ 374 (904)
T KOG4721|consen 327 SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLS 374 (904)
T ss_pred cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhc
Confidence 222233456677889999999999999999999999999887766543
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-40 Score=346.55 Aligned_cols=256 Identities=26% Similarity=0.376 Sum_probs=212.6
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc----Ch-hhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCC
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV----DE-SNIEQFINEVAILSQIN-HRNVVKLLGCCLETE 459 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 459 (700)
...++|.+.+.||+|.||+|++|... .++.||+|++... .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 44678999999999999999999865 6899999976542 11 33456778999999998 999999999999999
Q ss_pred cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC-CcEEEeecCC
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGA 538 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~-~~~kl~DfGl 538 (700)
..++||||+.+|+|.+++.... .+.+.++..+++||+.|++|||+++ |+||||||+|||++.+ +++||+|||+
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccc
Confidence 9999999999999999998843 3899999999999999999999999 9999999999999999 9999999999
Q ss_pred CcccccCCceeeeeeecccccccccccccCC-CC-cccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcc
Q 005355 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQ-FT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENR 616 (700)
Q Consensus 539 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 616 (700)
+.... .......+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||...+... +...+..+.
T Consensus 168 s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~-------l~~ki~~~~ 239 (370)
T KOG0583|consen 168 SAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN-------LYRKIRKGE 239 (370)
T ss_pred ccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH-------HHHHHhcCC
Confidence 98664 3444566778999999999999977 76 78999999999999999999998633221 111122222
Q ss_pred hhhhcchhhhhccCHHH-HHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 617 LFEVLDARVLKEAKEEE-IITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 617 ~~~~~d~~~~~~~~~~~-~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
+ ..+... ..++..|+.+||..+|.+|+++.+++ .-.-++.
T Consensus 240 ~----------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~~ 280 (370)
T KOG0583|consen 240 F----------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQK 280 (370)
T ss_pred c----------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hChhhcc
Confidence 1 111222 66789999999999999999999999 5555554
No 28
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=335.13 Aligned_cols=246 Identities=22% Similarity=0.382 Sum_probs=201.3
Q ss_pred ceEeeeCCeEEEEEEEcCCcEEEEEEccccChhh---HHHHHHHHHHHhhcCCCceeeEEeEEEe----CCcceEEEeeC
Q 005355 396 RILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESN---IEQFINEVAILSQINHRNVVKLLGCCLE----TEVPLLVYEFI 468 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~E~~ 468 (700)
..||+|+++.||+|++ +++.||||+++...... .+.|.+|+.+|++++||||+++++++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 6799999999999998 48999999987543322 5778899999999999999999999877 34678999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
++|+|.+++.... .+++...+.++.|++.||+|||+. + ++||||||+|||+++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 105 TRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 9999999997653 389999999999999999999985 6 7899999999999999999999999987543221
Q ss_pred eeeeeeeccccccccccccc--CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRS--SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
....++..|+|||++.+ ..++.++||||||+++|||++|+.||......+. ...+..+...
T Consensus 178 ---~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~-------~~~i~~~~~~------- 240 (283)
T PHA02988 178 ---FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI-------YDLIINKNNS------- 240 (283)
T ss_pred ---ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH-------HHHHHhcCCC-------
Confidence 23457889999999976 6899999999999999999999999986543221 1111111100
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
...+...+..+.+|+.+||+.||++|||++|+++.|+.++.
T Consensus 241 -~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 241 -LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred -CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 01122345678999999999999999999999999998875
No 29
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-40 Score=349.62 Aligned_cols=268 Identities=29% Similarity=0.457 Sum_probs=220.8
Q ss_pred hHHHHHHhcCCCccceEeeeCCeEEEEEEEcC--C--cE-EEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEe
Q 005355 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTN--G--RI-VAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLG 453 (700)
Q Consensus 382 ~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~--~--~~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 453 (700)
...++...++..+.++||+|+||.||+|+++. + .. ||||..+. .......+|.+|+++|++++|||||+++|
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 34456666777788999999999999999763 2 23 89998774 45777899999999999999999999999
Q ss_pred EEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEE
Q 005355 454 CCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKV 533 (700)
Q Consensus 454 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl 533 (700)
+.......++|||++.+|+|.++|++... .++..+++.++.++|.||+|||+++ ++||||.++|+|++.+..+||
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEe
Confidence 99999999999999999999999998765 3999999999999999999999999 999999999999999999999
Q ss_pred eecCCCcccccCCceeee-eeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHH
Q 005355 534 SDFGASRSVMIDQTHLTT-RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEA 611 (700)
Q Consensus 534 ~DfGl~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 611 (700)
+|||+++... ...... ...-+..|+|||.+....++.++|||||||++||+++ |..||.+....+ ....
T Consensus 304 SDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~-------v~~k 374 (474)
T KOG0194|consen 304 SDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE-------VKAK 374 (474)
T ss_pred CccccccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH-------HHHH
Confidence 9999997542 111111 2235679999999999999999999999999999999 888998766543 1222
Q ss_pred HHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcCC
Q 005355 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGD 671 (700)
Q Consensus 612 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~~ 671 (700)
+..+. .....+...+..+..++.+|+..+|++||+|.++.+.|+.+......
T Consensus 375 I~~~~--------~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 375 IVKNG--------YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHhcC--------ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 21111 11122234556788899999999999999999999999998876554
No 30
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.7e-39 Score=336.90 Aligned_cols=255 Identities=26% Similarity=0.353 Sum_probs=209.0
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcc
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 461 (700)
+...++|++++.||+|+||.||+++.+ .|+.+|+|+++.. ...+.+.++.|-.+|....+++||+|+..|.+.+.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 445789999999999999999999965 6999999998763 345678889999999999999999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
||||||++||++..+|.+.. .|++..+..++.+++-|+..||+.| +|||||||+|+|||..|++||+||||+..
T Consensus 217 YLiMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred EEEEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccch
Confidence 99999999999999998765 4999999999999999999999999 99999999999999999999999999864
Q ss_pred ccc-----------------------CCc-----e------------------eeeeeecccccccccccccCCCCcccc
Q 005355 542 VMI-----------------------DQT-----H------------------LTTRVQGTFGYLDPEYFRSSQFTEKSD 575 (700)
Q Consensus 542 ~~~-----------------------~~~-----~------------------~~~~~~gt~~y~aPE~~~~~~~s~ksD 575 (700)
+.. +.. . .....+|||.|||||++.+..|+...|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 321 000 0 011245999999999999999999999
Q ss_pred eehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC-
Q 005355 576 VYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT- 654 (700)
Q Consensus 576 VwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs- 654 (700)
.||||||+||||.|.+||....+.+--..+..+...+. .........+..+||.++|. ||++|.-
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~-------------fP~~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK-------------FPEEVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc-------------CCCcCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 99999999999999999998877653211111111111 01112233678899999999 9999976
Q ss_pred --HHHHHH
Q 005355 655 --MKEAAF 660 (700)
Q Consensus 655 --~~evl~ 660 (700)
++||-+
T Consensus 437 ~G~~EIK~ 444 (550)
T KOG0605|consen 437 KGAEEIKK 444 (550)
T ss_pred ccHHHHhc
Confidence 555544
No 31
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-39 Score=334.64 Aligned_cols=268 Identities=24% Similarity=0.376 Sum_probs=219.7
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
.+.+.+...+.++||+|-||.|.+.+...+.+||||+++..... .+.+|.+|+++|.+++||||++++|+|..++...+
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicm 612 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCM 612 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHH
Confidence 45667788899999999999999999988899999999875544 45899999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
|+|||++|+|.++|..+.... +......+|+.||+.||+||.+.+ +|||||.++|+|++.++++||+|||+++.+.
T Consensus 613 I~EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 613 ITEYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred HHHHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccc
Confidence 999999999999998875332 455666789999999999999999 9999999999999999999999999999776
Q ss_pred cCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh--CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 544 IDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT--GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 544 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
..+.+ .....+-+.+|||+|.+..++++.++|||+||++|||+++ .+.||.....+.. ++.......... ..
T Consensus 689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v---ven~~~~~~~~~-~~- 763 (807)
T KOG1094|consen 689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV---VENAGEFFRDQG-RQ- 763 (807)
T ss_pred cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH---HHhhhhhcCCCC-cc-
Confidence 55544 3345566889999999999999999999999999999866 7889865443321 221111111111 11
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
..-..+.-.+..+.+++.+||+.+.++||+++++...|.+.
T Consensus 764 ----~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 764 ----VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ----eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11122445667888999999999999999999999988654
No 32
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.8e-39 Score=331.79 Aligned_cols=256 Identities=21% Similarity=0.354 Sum_probs=208.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc----CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT----NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
.++|++.++||+|+||.||+|.+. .+..||+|.++... ......+.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 467899999999999999999864 35689999987643 3445678999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
||||+++|+|.+++..... .+++..++.++.||+.||+|||+++ ++||||||+|||++.++.+|++|||.+....
T Consensus 84 v~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999986532 4899999999999999999999999 9999999999999999999999999876532
Q ss_pred cCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
...........++..|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+..+..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-------~~~~~~~~~~----- 226 (266)
T cd05064 159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-------VIKAVEDGFR----- 226 (266)
T ss_pred ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHCCCC-----
Confidence 221111112334678999999999999999999999999999875 999997654322 1222222211
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
...+...+..+.+++.+||+.+|.+||+++++++.|+++
T Consensus 227 ----~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 ----LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 011233456789999999999999999999999999765
No 33
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-40 Score=326.81 Aligned_cols=247 Identities=25% Similarity=0.424 Sum_probs=213.2
Q ss_pred hcCCCccceEeeeCCeEEEEEEE-cCCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGML-TNGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
..+|++.+.||+|.||.|-+|.. ..|+.||||.++. .++++.-.+++|++||..|+||||+.++.+|...+..+||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 46788889999999999999995 6899999997653 5566777899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|||..+|.|.||+..... |++.++..+++||+.|+.|+|+++ ++|||||.+|||||.|+++||+||||+..+.
T Consensus 132 MEYaS~GeLYDYiSer~~---LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~- 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGS---LSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYA- 204 (668)
T ss_pred EEecCCccHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhc-
Confidence 999999999999987654 999999999999999999999999 9999999999999999999999999997653
Q ss_pred CCceeeeeeecccccccccccccCCCC-cccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
......+++|++-|.+||++.+.+|. ..+|-||||++||.|+.|..||++.+... +...+..+...+.
T Consensus 205 -~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~-------lvrQIs~GaYrEP--- 273 (668)
T KOG0611|consen 205 -DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR-------LVRQISRGAYREP--- 273 (668)
T ss_pred -cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH-------HHHHhhcccccCC---
Confidence 33445678899999999999999885 78999999999999999999998775332 3344454444332
Q ss_pred hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 624 RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 624 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
+.+....-||++||..||++|.|+.+|...
T Consensus 274 --------~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 274 --------ETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred --------CCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 223345569999999999999999998764
No 34
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=336.52 Aligned_cols=249 Identities=26% Similarity=0.388 Sum_probs=213.3
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
...|+.++.||+|.||.||+|.+. .++.||+|++.... ....+++.+|+.+|.+++++||.+.++.+..+..++++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 456777789999999999999975 68899999988643 4457889999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+.+|++.+.|+... .+.+..+..++++++.||.|||.++ .+|||||+.|||+..+|.+||+|||.+..+....
T Consensus 92 y~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh
Confidence 999999999998654 2588888899999999999999999 9999999999999999999999999998765444
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
... .+.+||+.|||||++....|+.|+||||||++.+||++|.+|+....+.. ..-++.+..+
T Consensus 166 ~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr----------------vlflIpk~~P 228 (467)
T KOG0201|consen 166 KRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR----------------VLFLIPKSAP 228 (467)
T ss_pred hcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce----------------EEEeccCCCC
Confidence 433 67789999999999998899999999999999999999999997654421 1222222222
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..........+.+++..||..||+.||++.++++
T Consensus 229 P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 229 PRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 3333466777999999999999999999999886
No 35
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.3e-38 Score=334.40 Aligned_cols=264 Identities=24% Similarity=0.385 Sum_probs=205.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcC-----------------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTN-----------------GRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVK 450 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~ 450 (700)
.++|++.++||+|+||.||++.+.+ +..||+|.+... .......|.+|++++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 5678999999999999999998542 336999988754 3444678999999999999999999
Q ss_pred EEeEEEeCCcceEEEeeCCCCCHHHHHhccCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 005355 451 LLGCCLETEVPLLVYEFIPNGTLYQYIHDQTE----------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIY 514 (700)
Q Consensus 451 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~----------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~iv 514 (700)
+++++.+.+..++||||+++++|.+++..... ...+++..++.++.||+.||+|||+.+ |+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence 99999999999999999999999999865321 124788999999999999999999999 99
Q ss_pred ecCCCCCcEEECCCCcEEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh--CCC
Q 005355 515 HRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT--GQK 591 (700)
Q Consensus 515 H~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt--g~~ 591 (700)
||||||+|||++.++.+||+|||+++........ ......++..|+|||++....++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999765332221 2223345788999999998899999999999999999987 567
Q ss_pred CCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 592 PIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 592 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
||......+. ............. ......+...+..+.+|+.+||+.+|++|||+.+|.+.|++
T Consensus 241 p~~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 241 PYGELTDEQV---IENAGEFFRDQGR------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCcCCHHHH---HHHHHHHhhhccc------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 7765443221 1111111111000 00011122345678999999999999999999999998863
No 36
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=9.3e-40 Score=338.08 Aligned_cols=246 Identities=27% Similarity=0.424 Sum_probs=211.0
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++|.+.+.||+|.||.||||+-+ +.+.||+|.+.. ..+...+.+++|++|++.++||||+.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888999999999999999965 688999998765 344567889999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+.+ +|..+|..... ++++.+..++.+++.||.|||+.+ |+|||+||.|||++..+.+|++|||+++.+.. .
T Consensus 82 ~a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~ 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMST-N 153 (808)
T ss_pred hhhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhccc-C
Confidence 9966 99999987654 999999999999999999999999 99999999999999999999999999997643 4
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
....+.+.||+-|||||.+.+..|+..+|+||+|||+|||+.|++||-..... ...+.+..+..
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~-------~Lv~~I~~d~v--------- 217 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT-------QLVKSILKDPV--------- 217 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH-------HHHHHHhcCCC---------
Confidence 55667788999999999999999999999999999999999999999633211 11122211111
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+......+..+++..|..||.+|.+..+++.
T Consensus 218 -~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 -KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred -CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 113356678899999999999999999999886
No 37
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8.8e-39 Score=327.92 Aligned_cols=257 Identities=22% Similarity=0.412 Sum_probs=210.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..++|++.++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++.+.+.+..+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 4578899999999999999999988888999998765332 357899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.++++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 83 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 83 MAKGSLLDFLKSDEG-GKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 999999999976432 24889999999999999999999999 99999999999999999999999999986543322
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.......++..|+|||++....++.++||||||+++|+|++ |..||......+ ....+......
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-------~~~~~~~~~~~-------- 223 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD-------VMSALQRGYRM-------- 223 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH-------HHHHHHcCCCC--------
Confidence 22223345678999999998899999999999999999998 999997543322 11111111100
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
......+..+.+++.+||..+|++||+++++++.|+++
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 224 -PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 11112345688999999999999999999999999864
No 38
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.8e-39 Score=345.25 Aligned_cols=264 Identities=26% Similarity=0.410 Sum_probs=209.4
Q ss_pred HHHHHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCceeeEEeEE
Q 005355 384 ELEMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQI-NHRNVVKLLGCC 455 (700)
Q Consensus 384 e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 455 (700)
++....++|++.+.||+|+||.||+|++. .+..||||+++... ....+.+.+|+.++..+ +||||+++++++
T Consensus 29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 34555678999999999999999999742 35689999987432 33456789999999999 899999999999
Q ss_pred EeCCcceEEEeeCCCCCHHHHHhccCC-----------------------------------------------------
Q 005355 456 LETEVPLLVYEFIPNGTLYQYIHDQTE----------------------------------------------------- 482 (700)
Q Consensus 456 ~~~~~~~lv~E~~~~gsL~~~l~~~~~----------------------------------------------------- 482 (700)
.+.+..++||||+++|+|.++++....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 999999999999999999999975321
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 483 -------------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 483 -------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceecc
Confidence 124788999999999999999999999 9999999999999999999999999997654
Q ss_pred cCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 544 IDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 544 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
...... .....++..|+|||++.+..++.++||||||+++|||++ |..||........ +...+..+..
T Consensus 266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~------~~~~~~~~~~---- 335 (375)
T cd05104 266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK------FYKMIKEGYR---- 335 (375)
T ss_pred CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH------HHHHHHhCcc----
Confidence 322211 112334567999999999999999999999999999998 8889875433221 1122222111
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
...+...+.++.+|+.+||+.||++||++.|++++|++.
T Consensus 336 -----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 -----MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 011112345788999999999999999999999999863
No 39
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-39 Score=343.61 Aligned_cols=246 Identities=28% Similarity=0.385 Sum_probs=209.2
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCC
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQIN-HRNVVKLLGCCLETE 459 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 459 (700)
.....++|.++++||+|.||+|+++..+ +++.+|||.++.. ...+.+....|.+|+...+ ||.++.++.+|...+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 3455688999999999999999999987 5789999988763 3556788899999998875 999999999999999
Q ss_pred cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
+.++||||+.||++..+.+.. .+++..+..++..|+.||+|||+++ |||||||.+|||||.+|.+||+|||++
T Consensus 443 ~l~fvmey~~Ggdm~~~~~~~----~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlc 515 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIHTD----VFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLC 515 (694)
T ss_pred eEEEEEEecCCCcEEEEEecc----cccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccc
Confidence 999999999999954444433 2999999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 540 RSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 540 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
+..... ...+.+.+||+.|||||++.+..|+.++|.|||||+|||||.|+.||.+.++++. ...+...
T Consensus 516 Ke~m~~-g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~-------FdsI~~d---- 583 (694)
T KOG0694|consen 516 KEGMGQ-GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV-------FDSIVND---- 583 (694)
T ss_pred cccCCC-CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-------HHHHhcC----
Confidence 875433 3356778999999999999999999999999999999999999999998876652 1111111
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTM 655 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~ 655 (700)
. -.++...+.+.+.|++++|..+|++|.-+
T Consensus 584 ----~--~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 584 ----E--VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ----C--CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1 12344556778899999999999999876
No 40
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.1e-38 Score=329.71 Aligned_cols=251 Identities=25% Similarity=0.329 Sum_probs=203.0
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++++++|+||+++++.+.+.+..++|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 4778899999999999999965 78999999876422 2234567899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999988865432 24899999999999999999999999 9999999999999999999999999997643221
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
......|+..|+|||++.+..++.++||||||+++|||++|+.||.......... ......... .
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~---~~~~~~~~~----------~ 221 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE---EVDRRVKED----------Q 221 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH---HHHHHhhcc----------c
Confidence 2233468999999999999999999999999999999999999998654322111 111111110 0
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPT-----MKEAAF 660 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs-----~~evl~ 660 (700)
...+...+..+.+|+.+||+.||++||+ ++++++
T Consensus 222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 1122334567889999999999999997 788876
No 41
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.1e-38 Score=332.10 Aligned_cols=265 Identities=23% Similarity=0.253 Sum_probs=204.0
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++|++.+.||+|+||.||+++++ +++.||||+++... ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47899999999999999999986 57899999876532 3345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|++++.|..+.... ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 99987776554332 23899999999999999999999999 9999999999999999999999999998654333
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH--------HH-HHhcch
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL--------EA-MKENRL 617 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~--------~~-~~~~~~ 617 (700)
........+++.|+|||++.+..++.++||||||+++|||++|+.||......+......... .. ......
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 333334568999999999999899999999999999999999999998654332211111100 00 000000
Q ss_pred hhhcchhh------hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 FEVLDARV------LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ~~~~d~~~------~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.....+.. ........+..+.+|+++||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 00011123457999999999999999999999885
No 42
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=340.61 Aligned_cols=254 Identities=28% Similarity=0.479 Sum_probs=214.1
Q ss_pred CccceEeeeCCeEEEEEEEc-CC----cEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 393 NTNRILGQGGQGTVYKGMLT-NG----RIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 393 ~~~~~lG~G~fg~Vy~~~~~-~~----~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
+..++||+|+||+||+|.|- .+ -+||||++.. ...+..+++++|+-+|.+++|||+++|++++.... +.||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 45689999999999999964 33 3689997654 34455688999999999999999999999998776 789999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
||+.|+|.|+++.++.+ +-.+..+.|..|||+||.|||.++ ++||||..+|||+..-..+||.|||+++.+..+.
T Consensus 778 ~mP~G~LlDyvr~hr~~--igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRDN--IGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred hcccchHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 99999999999987654 888999999999999999999999 9999999999999999999999999999887665
Q ss_pred ceeeee-eecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 547 THLTTR-VQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 547 ~~~~~~-~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
...... ..-.+.|||-|.+....++.++|||||||++|||+| |..|+.+...++..++.+ .+
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle-------~g--------- 916 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE-------KG--------- 916 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh-------cc---------
Confidence 554332 334668999999999999999999999999999999 999999887766433322 11
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
..-..+.....++..++.+||..|+..||+++++..++.++...
T Consensus 917 eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 917 ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 11223455677899999999999999999999999998776543
No 43
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.9e-38 Score=324.44 Aligned_cols=252 Identities=27% Similarity=0.432 Sum_probs=205.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
++|++.+.||+|+||.||++.++++..+|+|.+.... ...+++.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 5688889999999999999999888899999876432 234678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+|+|.++++.... .+++..++.++.|++.||+|||+++ ++||||||+||+++.++.+||+|||+++.........
T Consensus 83 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 83 NGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred CCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 9999999976432 3899999999999999999999999 9999999999999999999999999987653322222
Q ss_pred eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||......+. ...+..+.. ..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~-------~~~i~~~~~--~~------- 221 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV-------VEMISRGFR--LY------- 221 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-------HHHHHCCCC--CC-------
Confidence 222335668999999998899999999999999999999 8999975543221 111221111 00
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
.+...+..+.+|+.+||+.+|++||++.|+++.|.
T Consensus 222 ~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 222 RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11123456899999999999999999999999873
No 44
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.6e-38 Score=326.41 Aligned_cols=256 Identities=28% Similarity=0.442 Sum_probs=209.6
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..+|++.+.||+|+||.||+|.++ .++.||+|++... ....+.+.+|++++++++|+||+++++++...+..+++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 456888899999999999999976 5889999987753 33457789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++..... ..+++..++.++.|+++||+|||+.+ ++||||||+|||+++++.+||+|||++........
T Consensus 84 ~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 84 MTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 999999999976432 34899999999999999999999999 99999999999999999999999999976543322
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
........+..|+|||++.+..++.++||||||+++|||++ |..||.....++. ....... ..
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-------~~~~~~~---------~~ 223 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-------YELLEKG---------YR 223 (263)
T ss_pred eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-------HHHHHCC---------CC
Confidence 22222334668999999999999999999999999999998 9999876543321 1111111 01
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.+.+...+..+.+++.+||+.+|++||++.+++++|+.+
T Consensus 224 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 224 MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 112233456789999999999999999999999999875
No 45
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.3e-38 Score=324.87 Aligned_cols=258 Identities=24% Similarity=0.407 Sum_probs=210.6
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
...++|++.+.||+|++|.||+|.+.+++.||+|.++... ...+.+.+|+.++++++|+||+++++++...+..+++||
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 3457799999999999999999998778899999987543 234678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 82 LMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred cccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 999999999997654 234899999999999999999999999 9999999999999999999999999998664222
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
.........+..|+|||++.+..++.++||||||++++||++ |+.||......+ ....+.....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~~~~~~~-------- 222 (261)
T cd05068 158 YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE-------VLQQVDQGYR-------- 222 (261)
T ss_pred ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC--------
Confidence 111111223457999999999999999999999999999999 999997554222 1111211110
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
...+...+..+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 223 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 -MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred -CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 011223456789999999999999999999999999864
No 46
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-38 Score=344.28 Aligned_cols=264 Identities=27% Similarity=0.450 Sum_probs=209.5
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLV-DESNIEQFINEVAILSQI-NHRNVVKLLGCCL 456 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 456 (700)
+....++|++.+.||+|+||.||++++. ++..||||+++.. .....+.+.+|+++++.+ +|+||+++++++.
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 3455678999999999999999999853 2357999998753 334456789999999999 8999999999999
Q ss_pred eCCcceEEEeeCCCCCHHHHHhccCC------------------------------------------------------
Q 005355 457 ETEVPLLVYEFIPNGTLYQYIHDQTE------------------------------------------------------ 482 (700)
Q Consensus 457 ~~~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------------------ 482 (700)
+.+..++||||+++|+|.++++....
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 99999999999999999999864321
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce-
Q 005355 483 -------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH- 548 (700)
Q Consensus 483 -------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~- 548 (700)
..++++..+++++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++........
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 124788999999999999999999999 999999999999999999999999999765332221
Q ss_pred eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......++..|+|||++....++.++||||||+++|||++ |+.||........ +......+. ..
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~------~~~~~~~~~---------~~ 334 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK------FYKMVKRGY---------QM 334 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH------HHHHHHccc---------Cc
Confidence 1122335668999999999999999999999999999997 9999975433221 111111110 00
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
..+...+.++.+++.+||+.+|.+||++.+++++|+++.
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 111123467889999999999999999999999998863
No 47
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-39 Score=327.49 Aligned_cols=262 Identities=26% Similarity=0.320 Sum_probs=208.2
Q ss_pred cchHHHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--------------hhhHHHHHHHHHHHhhcC
Q 005355 380 FTSMELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--------------ESNIEQFINEVAILSQIN 444 (700)
Q Consensus 380 ~~~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--------------~~~~~~~~~E~~~l~~l~ 444 (700)
+...+-.+..++|++.+.||+|.||.|-+|+.. +++.||||++.... ....++..+|+.+|++++
T Consensus 87 ~~~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~ 166 (576)
T KOG0585|consen 87 YDDDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH 166 (576)
T ss_pred ecCcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC
Confidence 344455566799999999999999999999965 78999999865421 123568999999999999
Q ss_pred CCceeeEEeEEEe--CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCc
Q 005355 445 HRNVVKLLGCCLE--TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSAN 522 (700)
Q Consensus 445 h~niv~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~N 522 (700)
|+|||+|+++..+ .+..|||+||+..|.+...--.... +++.++++++++++.||.|||.++ |+||||||.|
T Consensus 167 H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~e---ls~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsN 240 (576)
T KOG0585|consen 167 HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPE---LSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSN 240 (576)
T ss_pred CcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCccc---ccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhh
Confidence 9999999999875 4688999999998877654333221 899999999999999999999999 9999999999
Q ss_pred EEECCCCcEEEeecCCCcccccC----CceeeeeeecccccccccccccCC----CCcccceehHHHHHHHHHhCCCCCC
Q 005355 523 ILLDDKYRAKVSDFGASRSVMID----QTHLTTRVQGTFGYLDPEYFRSSQ----FTEKSDVYSFGVVLVELLTGQKPIR 594 (700)
Q Consensus 523 ILl~~~~~~kl~DfGl~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSlG~il~elltg~~p~~ 594 (700)
+||+++|++||+|||.+..+... .........||+.|+|||...+.. -+.+.||||+||+||.|+.|+.||.
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~ 320 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF 320 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence 99999999999999999765221 111223367999999999987632 3468899999999999999999997
Q ss_pred CCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 595 STDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
+....+- ...++...+......++..++.+||++||..||+.|.+..+|....
T Consensus 321 ~~~~~~l---------------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 321 DDFELEL---------------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred cchHHHH---------------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 5543221 1223333332333345667899999999999999999999998765
No 48
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.3e-38 Score=326.53 Aligned_cols=258 Identities=26% Similarity=0.434 Sum_probs=214.2
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.+..+|++.++||+|+||.||+|.+.+++.+++|.+..........+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34567899999999999999999998899999999887766667789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++..... ..+++..++.++.||+.||+|||+++ ++|+||||+||++++++.+||+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 83 LMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred ecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 9999999999987532 34899999999999999999999999 9999999999999999999999999997653322
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
. ......++..|+|||++....++.++||||||+++++|++ |+.||......+. ...+..+.
T Consensus 159 ~-~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~-------~~~~~~~~--------- 221 (261)
T cd05148 159 Y-LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV-------YDQITAGY--------- 221 (261)
T ss_pred c-cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH-------HHHHHhCC---------
Confidence 1 1223335678999999998899999999999999999998 8999975542221 11111110
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
....+...+..+.+++.+||+.+|++|||++++++.|+.+
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 222 RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0111233456788999999999999999999999999864
No 49
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-38 Score=311.76 Aligned_cols=265 Identities=22% Similarity=0.261 Sum_probs=208.4
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChh--hHHHHHHHHHHHhhcCCCceeeEEeEEEeC--CcceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDES--NIEQFINEVAILSQINHRNVVKLLGCCLET--EVPLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 463 (700)
.++|+.++.|++|+||.||+|+++ +++.||+|+++...+. ..-.-++|+.+|.+.+|||||.+..+.... +..||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 356788899999999999999976 7899999998864432 233468999999999999999999987643 57899
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
||||++. +|..++..... ++...++.-++.|+++|++|||++. |+|||||++|+|+++.|.+||+|||+|+.+.
T Consensus 155 VMe~~Eh-DLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eHHHHHh-hHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999955 89999988763 4889999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcch-----
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRL----- 617 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 617 (700)
.. ....+..+.|++|.|||.+.+ ..|+++.|+||+|||+.||+.+++.|.+....+..+.+-..+....+..|
T Consensus 229 sp-~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 229 SP-LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred CC-cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 44 334566778999999999887 46999999999999999999999999887654433222211111111111
Q ss_pred ---------hhhcchhhhhccCHH-HHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 ---------FEVLDARVLKEAKEE-EIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ---------~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.......+...+... ....-.+|+..+|..||.+|.|++|.|+
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 111111122222221 3456788999999999999999999886
No 50
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-39 Score=337.30 Aligned_cols=247 Identities=27% Similarity=0.398 Sum_probs=212.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
+-|++.+.||+|+-|.|-+|++. .|+.+|||++... .......+.+|+.||+.+.|||++++++++.+..++|||.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 45788899999999999999975 7999999987643 3344567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|.|+++|-.+.. +++.++.+++.||+.|+.|+|+.+ |+||||||+|+|||...++||+|||+|..- .
T Consensus 92 Eyv~gGELFdylv~kG~---l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe--~ 163 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP---LPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLE--V 163 (786)
T ss_pred EecCCchhHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecc--c
Confidence 99999999999987653 999999999999999999999999 999999999999999999999999999753 3
Q ss_pred CceeeeeeecccccccccccccCCCC-cccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
......+.+|.+-|.|||++.+..|. .++||||.|||||.||+|+.||++.+.. .++..++.|.+
T Consensus 164 ~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir-------~LLlKV~~G~f------- 229 (786)
T KOG0588|consen 164 PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR-------VLLLKVQRGVF------- 229 (786)
T ss_pred CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH-------HHHHHHHcCcc-------
Confidence 44556677899999999999999885 7999999999999999999999854322 23333444443
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
+.+...+.+..+|+.+||..||++|.|++||++.
T Consensus 230 ---~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 230 ---EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ---cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 2244566788999999999999999999999984
No 51
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.4e-38 Score=329.74 Aligned_cols=265 Identities=23% Similarity=0.321 Sum_probs=202.6
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.++|++.++||+|+||.||+|..+ +++.||+|+++... ......+.+|++++++++|+||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 357899999999999999999976 68899999876432 2334567899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|++ ++|.+++..... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 84 YLD-SDLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CCC-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 997 599999875432 3789999999999999999999999 9999999999999999999999999987543222
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcch--------
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRL-------- 617 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 617 (700)
. ......+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+................+
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 158 K-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred c-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 1 2233457899999999865 56899999999999999999999999876544322211111000000000
Q ss_pred -hhhcchhh----hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 -FEVLDARV----LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 -~~~~d~~~----~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.....+.. ..........+..+|+.+||+.||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 00001123456789999999999999999999985
No 52
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.5e-38 Score=336.74 Aligned_cols=253 Identities=25% Similarity=0.368 Sum_probs=206.6
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||.||+|++. +++.||||+++.. .......+.+|++++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46899999999999999999976 5889999987643 2234567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999997653 3899999999999999999999999 99999999999999999999999999975432
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
......||+.|+|||++.+..++.++||||||+++|||++|..||......+.... +... ...+....
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~-------i~~~--~~~~~~~~ 221 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWEN-------LKYW--KETLQRPV 221 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHH-------HHhc--cccccCCC
Confidence 23345689999999999999999999999999999999999999986554332111 1110 00011000
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
........+.++.+|+.+||..+|.+||+++++++.
T Consensus 222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 010012345678899999999999999999999974
No 53
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=336.92 Aligned_cols=265 Identities=28% Similarity=0.442 Sum_probs=230.2
Q ss_pred hHHHHHHhcCCCccceEeeeCCeEEEEEEEcC-CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc
Q 005355 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEV 460 (700)
Q Consensus 382 ~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 460 (700)
.++++....++.+..+||-|-||.||.|.|+. .-.||||.++.. ....++|+.|+.+|+.++|||+|+|+|+|..+-.
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 36677778888999999999999999999973 567999998864 4456899999999999999999999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.|||.|||..|+|.+||+...+. .++.-.++.++.||..||.||..++ +|||||..+|+|+.++..|||+||||++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhh
Confidence 99999999999999999987543 3788889999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 541 SVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 541 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
.+..+.........-+..|.|||-+....++.|+|||+|||+|||+.| |..||.+.+..+. ..
T Consensus 414 lMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV----------------Y~ 477 (1157)
T KOG4278|consen 414 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV----------------YG 477 (1157)
T ss_pred hhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH----------------HH
Confidence 887766665555566789999999999999999999999999999998 8899987654332 22
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
++......+.+..+++.+.+|+++||++.|.+||++.|+-+.|+.+-.
T Consensus 478 LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 478 LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 333333345567788899999999999999999999999999977643
No 54
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.2e-38 Score=335.09 Aligned_cols=246 Identities=26% Similarity=0.337 Sum_probs=203.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
.++|++.+.||+|+||.||++++. +++.||||.+... .....+.+.+|+.++++++||||+++++.+.+.+..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 467899999999999999999976 5889999987643 223456788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|||+++++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+||||+.++.+||+|||++.....
T Consensus 97 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred EcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999998653 3889999999999999999999999 99999999999999999999999999976532
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
. .....|++.|+|||++.+..++.++||||||+++|||++|..||......+ ....+..+.+
T Consensus 171 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-------~~~~i~~~~~------- 232 (329)
T PTZ00263 171 R----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR-------IYEKILAGRL------- 232 (329)
T ss_pred C----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH-------HHHHHhcCCc-------
Confidence 2 223468999999999999999999999999999999999999997544321 1112222211
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPT-----MKEAAFE 661 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs-----~~evl~~ 661 (700)
..+......+.+|+.+||+.||.+||+ +++++..
T Consensus 233 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 233 ---KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111123456789999999999999997 6777643
No 55
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.7e-38 Score=331.44 Aligned_cols=245 Identities=24% Similarity=0.351 Sum_probs=203.5
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++++++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47889999999999999999976 68899999876432 234567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999997654 3899999999999999999999999 999999999999999999999999998765321
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
.....|++.|+|||++.+..++.++||||||+++|+|++|+.||......+. ...+..+..
T Consensus 155 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~-------~~~i~~~~~-------- 215 (291)
T cd05612 155 ----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI-------YEKILAGKL-------- 215 (291)
T ss_pred ----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhCCc--------
Confidence 2234589999999999999999999999999999999999999976543221 111111111
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPT-----MKEAAFE 661 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs-----~~evl~~ 661 (700)
..+......+.+|+++||+.||.+||+ ++|+++.
T Consensus 216 --~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 --EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred --CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 112223456889999999999999995 7777754
No 56
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-39 Score=318.81 Aligned_cols=267 Identities=25% Similarity=0.346 Sum_probs=210.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcc--ccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe-----CC
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSK--LVDESNIEQFINEVAILSQINHRNVVKLLGCCLE-----TE 459 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~ 459 (700)
....|...+.||+|+||.|..+..+ +|+.||||++. -......++..+|+.+|+.++|+||+.+++.+.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3456666899999999999999976 78999999987 3455667889999999999999999999999875 35
Q ss_pred cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
..|+|+|+| ..+|...|+.... ++.++...++.||++||.|+|+.+ ++||||||.|+|++.+..+||+|||++
T Consensus 100 DvYiV~elM-etDL~~iik~~~~---L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQD---LTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCcc---ccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccce
Confidence 679999999 6799999986643 999999999999999999999999 999999999999999999999999999
Q ss_pred cccccC-Cceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH--------
Q 005355 540 RSVMID-QTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL-------- 609 (700)
Q Consensus 540 ~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~-------- 609 (700)
+..... .....+..+.|.+|.|||++.. ..|+.+.||||.||||.||++|++-|.+.+......+.....
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 976432 2233456678999999998754 689999999999999999999999999887554333332221
Q ss_pred HHHHhcchhhhcc------hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 610 EAMKENRLFEVLD------ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 610 ~~~~~~~~~~~~d------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..+...+....+. +......-....+...+|+.+||..||.+|+|++|+++.
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111111111111 000011112344568899999999999999999999874
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.8e-38 Score=334.89 Aligned_cols=261 Identities=28% Similarity=0.409 Sum_probs=207.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.++|++.+.||+|+||.||++++. ++..||+|.+... .....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 578999999999999999999976 6788999987753 33445789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
|+++++|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKHQ---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcCC---EEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999997654 389999999999999999999985 5 999999999999999999999999998755322
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH---h--------
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK---E-------- 614 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~-------- 614 (700)
......++..|+|||++.+..++.++||||||+++|||++|+.||...+..+..... ..... .
T Consensus 158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF---GRPVVDGEEGEPHSISP 231 (331)
T ss_pred ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh---cccccccccCCccccCc
Confidence 223346899999999999999999999999999999999999999755432211100 00000 0
Q ss_pred -------------------cchhhhcchh----hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 615 -------------------NRLFEVLDAR----VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 615 -------------------~~~~~~~d~~----~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
....+..+.. ...........++.+|+.+||+.||++|||++|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 0000112345679999999999999999999999875
No 58
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.8e-38 Score=332.97 Aligned_cols=241 Identities=24% Similarity=0.320 Sum_probs=199.4
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
+.||+|+||.||++... +++.||||+++.. .......+.+|++++++++||||+++++.+...+..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999975 6899999987642 2344567889999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeee
Q 005355 472 TLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTT 551 (700)
Q Consensus 472 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~ 551 (700)
+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~ 153 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATMK 153 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCccc
Confidence 9999997653 3899999999999999999999999 999999999999999999999999998753222 22233
Q ss_pred eeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCH
Q 005355 552 RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKE 631 (700)
Q Consensus 552 ~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 631 (700)
...||+.|+|||++.+..++.++||||||+++|||++|..||...+.... ...+..+.. ..+.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-------~~~~~~~~~----------~~p~ 216 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-------FELILMEEI----------RFPR 216 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH-------HHHHHcCCC----------CCCC
Confidence 45699999999999999999999999999999999999999975443221 111111111 1123
Q ss_pred HHHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 632 EEIITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 632 ~~~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
.....+.+|+.+||+.||++|| ++.++++
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 217 TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 3456788999999999999999 7888876
No 59
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.3e-38 Score=326.30 Aligned_cols=249 Identities=37% Similarity=0.619 Sum_probs=197.1
Q ss_pred ccceEeeeCCeEEEEEEEc-----CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 394 TNRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 394 ~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+.+.||.|.||.||+|.+. .+..|+||.++.. .....+.|.+|++++++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999987 2568999999653 344578999999999999999999999999988889999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++|+|.++|.... ...+++..++.++.||++||+|||+++ ++|++|+++|||+++++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccccc-ccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 99999999999872 223899999999999999999999999 99999999999999999999999999986632222
Q ss_pred -eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 548 -HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 548 -~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
...........|+|||.+....++.++||||||+++|||++ |+.||......+ +...+.++....
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~-------~~~~~~~~~~~~------ 225 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE-------IIEKLKQGQRLP------ 225 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH-------HHHHHHTTEETT------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------ccccccccccce------
Confidence 22333457789999999999999999999999999999999 788986553322 122222222111
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
.+...+..+.+++.+||..+|++||++++++++|
T Consensus 226 ---~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 ---IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1122355688899999999999999999999987
No 60
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=304.77 Aligned_cols=267 Identities=25% Similarity=0.357 Sum_probs=217.0
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEE-EcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC----
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETE---- 459 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 459 (700)
+.+..++|++.+.||+|||+-||+++ ..+++.+|+|++......+.+..++|++..++++|||+++++++...+.
T Consensus 16 v~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 16 VIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred EEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 34557899999999999999999999 4578999999998877788899999999999999999999998876544
Q ss_pred -cceEEEeeCCCCCHHHHHhccCCCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 460 -VPLLVYEFIPNGTLYQYIHDQTEEF-PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 460 -~~~lv~E~~~~gsL~~~l~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
..||+++|...|+|.+.+.....++ .+++.+.++|+.+|++||.+||... +|++||||||.|||+++.+.++|.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEecc
Confidence 3799999999999999998754433 5999999999999999999999988 469999999999999999999999999
Q ss_pred CCcccccCCceee--------eeeeccccccccccccc---CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHH
Q 005355 538 ASRSVMIDQTHLT--------TRVQGTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG 606 (700)
Q Consensus 538 l~~~~~~~~~~~~--------~~~~gt~~y~aPE~~~~---~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~ 606 (700)
.+......-.... ....-|..|.|||.+.- ...++++|||||||+||+|+.|..||+..-..
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~------- 247 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ------- 247 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-------
Confidence 9876542211110 11235789999999854 46789999999999999999999999643221
Q ss_pred HHHHHHHhcch-hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 607 YFLEAMKENRL-FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 607 ~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
.+.+ ..+...++........++.+.+|+++||+.||.+||++.+++..++.+.
T Consensus 248 -------GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 248 -------GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -------CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111 1222323333333447788999999999999999999999999998764
No 61
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.2e-38 Score=325.66 Aligned_cols=258 Identities=29% Similarity=0.483 Sum_probs=210.4
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcC------CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcc
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTN------GRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 461 (700)
.++|++.+.||+|+||.||+|.+.. ...||+|.+.... ......|.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 3578899999999999999998643 2579999886533 34456789999999999999999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC
Q 005355 462 LLVYEFIPNGTLYQYIHDQTE-------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK 528 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~ 528 (700)
+++|||+++++|.+++..... ...+++..++.++.|++.||+|||+.+ ++|+||||+||+++++
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCC
Confidence 999999999999999976421 134889999999999999999999999 9999999999999999
Q ss_pred CcEEEeecCCCcccccCCc-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHH
Q 005355 529 YRAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVG 606 (700)
Q Consensus 529 ~~~kl~DfGl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~ 606 (700)
+.+||+|||++........ .......+++.|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~------ 234 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE------ 234 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH------
Confidence 9999999999976533222 12233446788999999998899999999999999999998 999997654332
Q ss_pred HHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 607 YFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 607 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
....+..+.. ...+...+..+.+|+.+||+.+|.+||+++||++.|+.+
T Consensus 235 -~~~~i~~~~~---------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 -VIEMIRSRQL---------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred -HHHHHHcCCc---------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 1122222211 112334567899999999999999999999999999763
No 62
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-39 Score=301.14 Aligned_cols=250 Identities=26% Similarity=0.369 Sum_probs=210.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
..++|++.+.||+|.||.||.|+.+ ++-.||+|++.... .....++++|++|-+.|+||||++++++|.+....+|
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 4578999999999999999999966 67889999876422 2335678999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
++||.++|+|...|...... .+++.....++.|+|.||.|+|..+ ++||||||+|+|++.++.+||+|||.+....
T Consensus 100 ilEya~~gel~k~L~~~~~~-~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMK-RFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEecCCchHHHHHHhcccc-cccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 99999999999999854332 3888999999999999999999999 9999999999999999999999999986432
Q ss_pred cCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
.....+.+||..|++||+..+...+.++|+|++|++.||++.|.+||......+ ..+.+..- ++
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e-------tYkrI~k~---~~--- 239 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE-------TYKRIRKV---DL--- 239 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH-------HHHHHHHc---cc---
Confidence 444566789999999999999999999999999999999999999997554222 11111111 11
Q ss_pred hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 624 RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 624 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..+...+...+++|.+||..+|.+|.+..|+++.
T Consensus 240 ----~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 240 ----KFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred ----cCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1234456678899999999999999999998863
No 63
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.4e-38 Score=320.73 Aligned_cols=252 Identities=27% Similarity=0.423 Sum_probs=205.7
Q ss_pred cCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
++|++.+.||+|+||.||+|.+.++..+|+|.+..... ..+.+.+|+.++++++||||+++++++.+.+..+++|||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 56788899999999999999988777899998775332 34679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+++|.+++..... .+++..++.++.||+.||+|||+.+ ++|+||||+||+++.++.+||+|||+++.........
T Consensus 83 ~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 83 NGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred CCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 9999999976433 4899999999999999999999999 9999999999999999999999999987654332222
Q ss_pred eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
.....++..|+|||++.+..++.++||||||+++|+|++ |..||......+ ....+..+... .
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~---------~ 221 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-------TVEKVSQGLRL---------Y 221 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHhcCCCC---------C
Confidence 222335678999999998889999999999999999998 999987554322 11111111111 0
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
.+...+..+.+++.+||+.+|.+||++.++++.|+
T Consensus 222 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11123467899999999999999999999998874
No 64
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=6.1e-38 Score=325.07 Aligned_cols=257 Identities=28% Similarity=0.480 Sum_probs=209.9
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcC------CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcc
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTN------GRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 461 (700)
.++|.+.+.||+|+||.||+|.+.+ ++.||||+++..... ..+.+.+|++++++++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 4568888999999999999998643 478999998765444 457899999999999999999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTE-----------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR 530 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~ 530 (700)
++||||+++++|.+++..... ...+++..+..++.|++.||+|||+++ ++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCe
Confidence 999999999999999976421 234789999999999999999999999 999999999999999999
Q ss_pred EEEeecCCCcccccCCc-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHH
Q 005355 531 AKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYF 608 (700)
Q Consensus 531 ~kl~DfGl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 608 (700)
+||+|||++........ .......+++.|+|||++.+..++.++||||||+++|||++ |..||......+ .
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-------~ 233 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-------V 233 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------H
Confidence 99999999975433221 11223345788999999999999999999999999999998 999987554332 1
Q ss_pred HHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 609 LEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 609 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
...+..+... ..+...+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 234 ~~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 234 IECITQGRLL---------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHcCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1222222211 1122345678999999999999999999999999863
No 65
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.4e-37 Score=320.02 Aligned_cols=256 Identities=24% Similarity=0.418 Sum_probs=208.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcC----CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
.++|++.+.||+|+||.||+|.+.. ...||||.++.. .......|.+|+.++++++|+||+++++.+.+.+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 4678999999999999999999752 457999987753 34445788999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
+|||+++++|.+++..... .+++..++.++.|++.||+|||+.+ |+|+||||+|||+++++.+||+|||++....
T Consensus 83 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 83 ITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 9999999999999976543 4899999999999999999999999 9999999999999999999999999998764
Q ss_pred cCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 544 IDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 544 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
..... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||......+ ....+......
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~--- 227 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD-------VIKAVEDGYRL--- 227 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH-------HHHHHHcCCCC---
Confidence 22221 1122334678999999999999999999999999999998 999986543222 11122111110
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
..+...+..+.+|+.+||+.+|++||+++|+++.|+++
T Consensus 228 ------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 ------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11123456788999999999999999999999999875
No 66
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=8.1e-37 Score=369.90 Aligned_cols=271 Identities=26% Similarity=0.429 Sum_probs=214.6
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
+.....+...++||+|+||.||+|++. ++..||||++...... ...|++++++++||||+++++++.+.+..++|
T Consensus 686 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 686 NDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred HHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEE
Confidence 333456788899999999999999974 7899999988653322 23468889999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|||+++|+|.++++. ++|..+.+++.|+++||+|||+...++|+||||||+||+++.++..++. |+.......
T Consensus 762 ~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 762 HEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT 834 (968)
T ss_pred EeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc
Confidence 999999999999963 8899999999999999999996644559999999999999999888875 665543221
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
. ....+++.|+|||++.+..++.|+||||||+++|||++|+.||..... .......|.............+++.
T Consensus 835 ~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (968)
T PLN00113 835 D-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPS 908 (968)
T ss_pred C-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCcc
Confidence 1 123578999999999999999999999999999999999999954322 2233444444444334444455555
Q ss_pred hhh--ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcCCCc
Q 005355 625 VLK--EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSI 673 (700)
Q Consensus 625 ~~~--~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~~~~ 673 (700)
+.. ..+.++..++.+++.+||+.+|++||+|+|++++|+++.+....+.
T Consensus 909 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~~~ 959 (968)
T PLN00113 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSSCV 959 (968)
T ss_pred ccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccccc
Confidence 432 2345667788999999999999999999999999998866544333
No 67
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-37 Score=325.34 Aligned_cols=261 Identities=25% Similarity=0.420 Sum_probs=214.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
..+|.+.+.||+|+||.||+++.. ++..+++|.+........+.+.+|++++++++|+||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 356888899999999999999853 34568999988766666778999999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC
Q 005355 463 LVYEFIPNGTLYQYIHDQTE-------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY 529 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~ 529 (700)
+||||+++++|.+++..... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCC
Confidence 99999999999999976421 234899999999999999999999999 99999999999999999
Q ss_pred cEEEeecCCCcccccCCc-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHH
Q 005355 530 RAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGY 607 (700)
Q Consensus 530 ~~kl~DfGl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 607 (700)
.+||+|||++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~------- 233 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE------- 233 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 999999999975533221 12233446788999999999999999999999999999999 999987554332
Q ss_pred HHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 608 FLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 608 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
....+..+.... .+...+..+.+++.+||+.+|++||++++|+++|+++.+.
T Consensus 234 ~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 234 VIECITQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHHhCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 112222222211 1122355788999999999999999999999999999664
No 68
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=332.39 Aligned_cols=252 Identities=26% Similarity=0.363 Sum_probs=217.5
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc-ceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEV-PLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv 464 (700)
.++|..++++|+|+||.++..+++ +++.+++|++... .....+...+|+.++++++|||||.+.+.+.+++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 467889999999999999999876 6789999987653 33445578899999999999999999999999988 8999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|+|++||+|.+.|.+.+ ...++++.+..++.||+.|+.|||++. |+|||||+.|||++.+..|||+|||+++.+..
T Consensus 83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999998876 345999999999999999999999888 99999999999999999999999999998765
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
+. ....+..||+.||.||.+.+.+|..|+|||||||++|||++-+++|...+..+- +. +.. ..
T Consensus 159 ~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L---i~---ki~----------~~ 221 (426)
T KOG0589|consen 159 ED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL---IL---KIN----------RG 221 (426)
T ss_pred ch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH---HH---HHh----------hc
Confidence 54 345667899999999999999999999999999999999999999987765442 11 111 11
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.....+..+..++..|+..||+.+|+.||++.+++.+
T Consensus 222 ~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1234456778889999999999999999999999986
No 69
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.1e-37 Score=324.87 Aligned_cols=261 Identities=26% Similarity=0.442 Sum_probs=213.3
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
.++|.+.+.||+|+||.||++... ++..+|+|.+........+.+.+|++++++++|+||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 467889999999999999999852 34568999988766666788999999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEE
Q 005355 463 LVYEFIPNGTLYQYIHDQT----------EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAK 532 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~k 532 (700)
+||||+++++|.+++.... ....+++..++.++.|++.||+|||+++ ++||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEE
Confidence 9999999999999997543 1234899999999999999999999999 99999999999999999999
Q ss_pred EeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHH
Q 005355 533 VSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLE 610 (700)
Q Consensus 533 l~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 610 (700)
|+|||++......... ......++..|+|||++.+..++.++||||||+++++|++ |..||......+ ...
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-------~~~ 233 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------VIE 233 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHH
Confidence 9999999765332211 1222335778999999999999999999999999999998 899987554322 122
Q ss_pred HHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 611 AMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 611 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
.+..+.... .+...+..+.+|+.+||+.+|.+|||++|+++.|+++...
T Consensus 234 ~i~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 234 CITQGRVLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHcCCcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 222222111 1112345689999999999999999999999999998754
No 70
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8.7e-38 Score=319.69 Aligned_cols=251 Identities=28% Similarity=0.436 Sum_probs=204.3
Q ss_pred cCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
.+|++.+.||+|+||.||++.++++..+|+|++..... ..+.+.+|++++++++|+||+++++++.+.+..++|+||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 45788899999999999999988777899998764322 23568899999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+++|.+++..... .+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.........
T Consensus 83 ~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 83 NGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 9999999976543 4899999999999999999999999 9999999999999999999999999987653222211
Q ss_pred eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
.....++..|+|||.+.+..++.++||||||+++|+|++ |..||......+. ........ . ..
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-------~~~~~~~~-----~----~~ 221 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV-------VESVSAGY-----R----LY 221 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH-------HHHHHcCC-----c----CC
Confidence 122224467999999999999999999999999999999 8999975543221 11111110 0 01
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
.+...+..+.+|+.+||+.+|++|||+.|++++|
T Consensus 222 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1223456789999999999999999999999987
No 71
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.1e-37 Score=319.58 Aligned_cols=257 Identities=23% Similarity=0.411 Sum_probs=209.0
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
+..++|++.++||+|+||.||+|...+++.||+|.+..... ..+++.+|+.++++++|+|++++++.+ ..+..++++|
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e 80 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITE 80 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEE
Confidence 44678999999999999999999988889999998875433 346789999999999999999999886 4567899999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++..... ..+++.+++.++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 81 YMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred cCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 9999999999876432 34899999999999999999999999 9999999999999999999999999997654222
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
........++..|+|||++....++.++||||||++++||++ |+.||......+ ....+..+..
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~-------- 221 (260)
T cd05067 157 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE-------VIQNLERGYR-------- 221 (260)
T ss_pred cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH-------HHHHHHcCCC--------
Confidence 222223345678999999998899999999999999999999 999997554322 1111111110
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
...+...+..+.+++.+||+.+|++||+++++++.|+.+
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 222 -MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 011222345799999999999999999999999999763
No 72
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.2e-37 Score=319.49 Aligned_cols=255 Identities=26% Similarity=0.418 Sum_probs=206.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..++|++.++||+|+||.||++...++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. .+..+++|||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 3567899999999999999999988888899998875433 3467999999999999999999999875 4567999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 82 MSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred cCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 999999999976432 24899999999999999999999999 99999999999999999999999999976543322
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.......++..|+|||++.+..++.++||||||+++|+|++ |..||......+ ....+.... .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-------~~~~~~~~~---------~ 221 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-------VLEQVERGY---------R 221 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCC---------C
Confidence 22222335678999999988899999999999999999999 899997543222 111111110 0
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
...+...+..+.+|+.+||..+|++|||+.++++.|++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11122345678999999999999999999999999875
No 73
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-37 Score=328.92 Aligned_cols=258 Identities=25% Similarity=0.478 Sum_probs=206.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCc----EEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGR----IVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
..+|++.+.||+|+||.||+|++. +++ .||||.++.. .....+.+.+|+.+++.++|+||+++++++... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 467899999999999999999964 333 4899998753 344567899999999999999999999998764 568
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+++||+++|+|.+++..... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 85 ~v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 85 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccc
Confidence 99999999999999987543 3889999999999999999999999 999999999999999999999999999866
Q ss_pred ccCCceee-eeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 543 MIDQTHLT-TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 543 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
........ .....+..|+|||++.+..++.++||||||+++|||++ |..||......+. ......+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-------~~~~~~~~~~-- 230 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-------SSILEKGERL-- 230 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-------HHHHhCCCCC--
Confidence 43332221 12234678999999999999999999999999999998 9999975543221 1111111110
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
..+......+.+++.+||+.+|.+||++.+++..|..+...
T Consensus 231 -------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 231 -------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred -------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 01112345688899999999999999999999999887643
No 74
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.6e-37 Score=325.15 Aligned_cols=273 Identities=24% Similarity=0.410 Sum_probs=214.2
Q ss_pred cCCCccceEeeeCCeEEEEEEEcC-C--cEEEEEEccc-cChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLTN-G--RIVAIKKSKL-VDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~~-~--~~vavK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 464 (700)
++|++.+.||+|+||.||+|.+++ + ..+++|.++. ......+.+.+|++++.++ +||||+++++++.+.+..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578899999999999999999753 3 3578888774 3344557789999999999 799999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcE
Q 005355 465 YEFIPNGTLYQYIHDQTE-------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRA 531 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~ 531 (700)
+||+++++|.+++..... ...+++..++.++.|++.||+|||+++ ++||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 999999999999975321 124889999999999999999999999 9999999999999999999
Q ss_pred EEeecCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHH
Q 005355 532 KVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLE 610 (700)
Q Consensus 532 kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 610 (700)
||+|||++...... ........+..|+|||++....++.++||||||+++|||++ |..||......+. ..
T Consensus 159 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~-------~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL-------YE 229 (297)
T ss_pred EECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-------HH
Confidence 99999998643211 11111223557999999999899999999999999999997 9999975543221 11
Q ss_pred HHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcCCCccCCCCCccce
Q 005355 611 AMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHNCDDIDF 683 (700)
Q Consensus 611 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~~~~~~~~~~~~~~ 683 (700)
....+ .....+...+..+.+|+.+||+.+|.+||++.++++.|+.+.........+...+.-.+
T Consensus 230 ~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 293 (297)
T cd05089 230 KLPQG---------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAYVNMALFENFTY 293 (297)
T ss_pred HHhcC---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcccccchhhhhhcc
Confidence 11111 01111223445788999999999999999999999999998877666555444444333
No 75
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9.9e-38 Score=323.18 Aligned_cols=259 Identities=27% Similarity=0.459 Sum_probs=207.3
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETE 459 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 459 (700)
...++|++.+.||+|+||.||+|.+. .+..||||++.... .....++.+|+.+++.++|+||+++++++.+..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35678999999999999999999854 24679999876432 334567899999999999999999999999999
Q ss_pred cceEEEeeCCCCCHHHHHhccCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEE
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTE-------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAK 532 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~k 532 (700)
..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+.+ ++|+||||+|||+++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEE
Confidence 99999999999999999976322 124678899999999999999999999 99999999999999999999
Q ss_pred EeecCCCcccccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHH
Q 005355 533 VSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLE 610 (700)
Q Consensus 533 l~DfGl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 610 (700)
|+|||++.......... .....++..|+|||++.+..++.++||||||+++|||++ |..||......+ ...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~-------~~~ 232 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ-------VLR 232 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHH
Confidence 99999987553322211 112345778999999999999999999999999999999 788987554322 111
Q ss_pred HHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 611 AMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 611 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
........ ..+...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 233 ~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHcCCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 22221111 1122334578999999999999999999999998863
No 76
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.2e-37 Score=337.63 Aligned_cols=265 Identities=25% Similarity=0.395 Sum_probs=211.2
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcC-CCceeeEEeEEE
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQIN-HRNVVKLLGCCL 456 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 456 (700)
++...++|++.++||+|+||.||+|++. .+..||||++.... ....+.+.+|+++++++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 4455788999999999999999999863 13479999987533 344578999999999996 999999999999
Q ss_pred eCCcceEEEeeCCCCCHHHHHhccCC------------------------------------------------------
Q 005355 457 ETEVPLLVYEFIPNGTLYQYIHDQTE------------------------------------------------------ 482 (700)
Q Consensus 457 ~~~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------------------ 482 (700)
+.+..+|||||+++|+|.++|+....
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 99999999999999999999875321
Q ss_pred ---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcE
Q 005355 483 ---------------------------------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANI 523 (700)
Q Consensus 483 ---------------------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NI 523 (700)
...+++..++.++.||++||+|||+.+ |+||||||+||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Ni 268 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNV 268 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhE
Confidence 123788889999999999999999999 99999999999
Q ss_pred EECCCCcEEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhh
Q 005355 524 LLDDKYRAKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEED 601 (700)
Q Consensus 524 Ll~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~ 601 (700)
|++.++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||........
T Consensus 269 ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 269 LLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred EEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 9999999999999999765332221 1222346778999999999999999999999999999997 9999875432221
Q ss_pred hhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 602 KSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
+...+..+.. ...+...+..+.+++.+||+.+|++||++.+|.++|+++..
T Consensus 349 ------~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 349 ------FYNKIKSGYR---------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ------HHHHHhcCCC---------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 1111221110 11122345678999999999999999999999999998653
No 77
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-37 Score=336.05 Aligned_cols=260 Identities=23% Similarity=0.286 Sum_probs=199.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
...+|++.+.||+|+||.||++.+. .++.||+|+.. .+.+.+|++++++++||||+++++++......++|+|
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 3467999999999999999999975 68899999754 2457899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
++. ++|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 164 ~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 164 RYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred cCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 994 78988887643 3899999999999999999999999 9999999999999999999999999997533222
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhh----hhHHHHHHHHHHh--------
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEED----KSLVGYFLEAMKE-------- 614 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~----~~~~~~~~~~~~~-------- 614 (700)
........||+.|+|||++.+..++.++||||||+++|||++|..||........ .............
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 2223345699999999999999999999999999999999999988754321110 0011111100000
Q ss_pred --cchhhhc---------ch--hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 615 --NRLFEVL---------DA--RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 615 --~~~~~~~---------d~--~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+.... .+ ..........+.++.+|+.+||+.||++|||++|+++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000 00 0000001134567899999999999999999999986
No 78
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.3e-37 Score=327.97 Aligned_cols=239 Identities=26% Similarity=0.319 Sum_probs=195.7
Q ss_pred EeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 398 LGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
||+|+||.||++... +++.||+|++... .......+.+|+.++++++||||+++++.+.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999976 5789999987642 344556788999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeee
Q 005355 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553 (700)
Q Consensus 474 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~ 553 (700)
.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ......
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~ 153 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTF 153 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Cccccc
Confidence 99997643 3899999999999999999999999 9999999999999999999999999987542222 223345
Q ss_pred ecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHH
Q 005355 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEE 633 (700)
Q Consensus 554 ~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 633 (700)
.||+.|+|||++.+..++.++||||||+++|||++|+.||......+ .+ ..+.... ...+...
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~------~~-~~~~~~~----------~~~~~~~ 216 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE------MY-RKILQEP----------LRFPDGF 216 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH------HH-HHHHcCC----------CCCCCcC
Confidence 68999999999999999999999999999999999999997544322 11 1111111 0122334
Q ss_pred HHHHHHHHHHHhccCCCCCCC---HHHHHH
Q 005355 634 IITVAMLAKRCLNMIGKKRPT---MKEAAF 660 (700)
Q Consensus 634 ~~~l~~li~~cl~~~p~~RPs---~~evl~ 660 (700)
...+.+|+.+||+.||++||+ +.|++.
T Consensus 217 ~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 567889999999999999986 455544
No 79
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.3e-37 Score=323.55 Aligned_cols=265 Identities=29% Similarity=0.453 Sum_probs=205.9
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-----CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe--CCcc
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE--TEVP 461 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 461 (700)
.++|++.+.||+|+||.||++..+ +++.||+|++........+.+.+|++++++++|+||+++++++.. ....
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 357888999999999999999843 578999999887777777889999999999999999999998754 3467
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++|+||+++++|.+++..... .+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||++..
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccc
Confidence 899999999999999976432 3899999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCcee--eeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcc---
Q 005355 542 VMIDQTHL--TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENR--- 616 (700)
Q Consensus 542 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 616 (700)
........ .....++..|+|||++.+..++.++||||||++++||++|..++....... ...+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--------~~~~~~~~~~~ 229 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEF--------MRMMGNDKQGQ 229 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhh--------hhhcccccccc
Confidence 54332211 111223446999999998899999999999999999999877764332110 00000000
Q ss_pred -----hhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 617 -----LFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 617 -----~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
+.+.+............+..+.+|+.+||+.+|++|||++|+++.|+.++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 230 MIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred cchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 00011110001112234457899999999999999999999999998764
No 80
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-37 Score=330.58 Aligned_cols=251 Identities=24% Similarity=0.306 Sum_probs=200.9
Q ss_pred CCCccceEeeeCCeEEEEEEEc----CCcEEEEEEcccc----ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcc
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT----NGRIVAIKKSKLV----DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 461 (700)
+|++.+.||+|+||.||+++.. .++.||+|++... .....+.+..|+.+++.+ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4788999999999999998853 5789999987642 223356788999999999 599999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999997643 3899999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCceeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 542 VMIDQTHLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 542 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
.............||+.|+|||++.+. .++.++||||||+++|||++|+.||.......... .+...+...
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~~~~~~~~~----- 226 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS---EVSRRILKC----- 226 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH---HHHHHHhcC-----
Confidence 543333333445699999999999875 47889999999999999999999997543222111 111111110
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
++ ..+......+.+++.+||+.||++|| +++++++
T Consensus 227 -~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 227 -DP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred -CC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11 11223455688999999999999999 6777775
No 81
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.9e-37 Score=318.44 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=206.8
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..++|++.++||+|+||.||+|++.+...||+|+++.... ..+.+.+|++++++++|+||+++++.+. .+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 3567999999999999999999987777899999875332 3467899999999999999999999874 4567999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++..... ..+++..++.++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 82 MSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 999999999976432 24799999999999999999999999 99999999999999999999999999976543322
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.......++..|+|||++.+..++.++||||||+++|||++ |..||......+. ...+.....
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-------~~~~~~~~~--------- 221 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-------LDQVERGYR--------- 221 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-------HHHHhcCCC---------
Confidence 22223346678999999998999999999999999999999 8888875543221 111111100
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.......+..+.+|+.+|++.+|++||++.++++.|+..
T Consensus 222 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 222 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 011234456788999999999999999999999999864
No 82
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.9e-37 Score=321.58 Aligned_cols=263 Identities=23% Similarity=0.410 Sum_probs=212.7
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcC-----CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe-CC
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTN-----GRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLE-TE 459 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 459 (700)
+..++|++.++||+|+||.||+|.+.+ +..|++|++... .....+.+.+|+.++++++|+||+++++++.+ ..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 346789999999999999999999765 688999987753 34456778999999999999999999998776 46
Q ss_pred cceEEEeeCCCCCHHHHHhccCCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEe
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEE-----FPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVS 534 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~ 534 (700)
..++++||+++++|.+++...... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999999764322 45899999999999999999999999 9999999999999999999999
Q ss_pred ecCCCcccccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHH
Q 005355 535 DFGASRSVMIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAM 612 (700)
Q Consensus 535 DfGl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 612 (700)
|||+++.+....... .....++..|+|||++.+..++.++||||||+++|||++ |+.||......+ . ...+
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~----~~~~ 232 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---M----AAYL 232 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---H----HHHH
Confidence 999998654333221 222345778999999998899999999999999999999 999997554322 1 1111
Q ss_pred HhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 613 KENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 613 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
..+.. .......+..+.+++.+||+.+|++|||+.++++.|+.+.+.
T Consensus 233 ~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 233 KDGYR---------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HcCCC---------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 11110 001122345788999999999999999999999999988654
No 83
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-38 Score=329.90 Aligned_cols=259 Identities=24% Similarity=0.415 Sum_probs=216.0
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc--CCc--EEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT--NGR--IVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
..+.+.+.++||+|.||.|++|.|+ +|+ .||||.++..... ...+|++|+.+|.+|+|+|+++|+|+..+ ....
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhh
Confidence 3455567789999999999999987 343 6899998875554 67899999999999999999999999998 6778
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
||+|+.+.|+|.+.|++ ..+..+....+..++.|||.||+||.+++ +|||||..+|+||-....|||+||||++.+
T Consensus 187 MV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred HHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceecc
Confidence 99999999999999998 34456888999999999999999999999 999999999999998889999999999988
Q ss_pred ccCCcee--eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 543 MIDQTHL--TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 543 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
...+... .......+.|+|||.+....++.++|||+|||+||||++ |+.||.+-.... +.+
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q----------------IL~ 326 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ----------------ILK 326 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH----------------HHH
Confidence 7654432 122335678999999999999999999999999999999 889998765432 122
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
.+|..-.-..+..+++++.++++.||..+|.+|||+..|.+.+--.++
T Consensus 327 ~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~ea 374 (1039)
T KOG0199|consen 327 NIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEA 374 (1039)
T ss_pred hccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhc
Confidence 233322334466788899999999999999999999999866543333
No 84
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2e-37 Score=323.55 Aligned_cols=264 Identities=27% Similarity=0.435 Sum_probs=212.0
Q ss_pred HHHHHhcCCCccceEeeeCCeEEEEEEEcC------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCceeeEEeEE
Q 005355 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTN------GRIVAIKKSKLV-DESNIEQFINEVAILSQI-NHRNVVKLLGCC 455 (700)
Q Consensus 384 e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 455 (700)
+++...++|++.+.||+|+||.||++.+.. ...+|+|.+... .......+.+|+++++++ +|+||+++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 345566789999999999999999998642 367999987753 334456789999999999 799999999999
Q ss_pred EeCCcceEEEeeCCCCCHHHHHhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCc
Q 005355 456 LETEVPLLVYEFIPNGTLYQYIHDQT-------------EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSAN 522 (700)
Q Consensus 456 ~~~~~~~lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~N 522 (700)
...+..+++|||+++++|.++++... ....+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~N 162 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARN 162 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceee
Confidence 99999999999999999999997531 2245899999999999999999999999 9999999999
Q ss_pred EEECCCCcEEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchh
Q 005355 523 ILLDDKYRAKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600 (700)
Q Consensus 523 ILl~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~ 600 (700)
||+++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 242 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH
Confidence 99999999999999999865432221 1222335678999999999999999999999999999997 999987554332
Q ss_pred hhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
. ...+..+.. ...+......+.+|+.+||..+|++|||+.|+++.|+.+.
T Consensus 243 ~-------~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 L-------FKLLKEGYR---------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred H-------HHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1 111111111 1112233557889999999999999999999999998763
No 85
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.5e-37 Score=328.07 Aligned_cols=242 Identities=24% Similarity=0.329 Sum_probs=199.0
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
++||+|+||.||++... +++.||||++... .......+.+|+.+++.++||||+++++.+...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999975 6899999987642 2344567889999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeee
Q 005355 472 TLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTT 551 (700)
Q Consensus 472 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~ 551 (700)
+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~ 153 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMK 153 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc-ccccc
Confidence 9999987653 3899999999999999999999999 999999999999999999999999998753222 12223
Q ss_pred eeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCH
Q 005355 552 RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKE 631 (700)
Q Consensus 552 ~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 631 (700)
...||+.|+|||++.+..++.++||||||+++|+|++|+.||......+. ...+..... ..+.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~-------~~~~~~~~~----------~~p~ 216 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-------FELILMEDI----------KFPR 216 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH-------HHHhccCCc----------cCCC
Confidence 45689999999999999999999999999999999999999975543221 111111110 1122
Q ss_pred HHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 005355 632 EEIITVAMLAKRCLNMIGKKRP-----TMKEAAFE 661 (700)
Q Consensus 632 ~~~~~l~~li~~cl~~~p~~RP-----s~~evl~~ 661 (700)
.....+.+|+.+||+.||++|| ++.|+++.
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 217 TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 3455788999999999999997 89998864
No 86
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.9e-38 Score=313.02 Aligned_cols=272 Identities=24% Similarity=0.326 Sum_probs=209.9
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCc-eeeEEeEEEeCC-----
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE--SNIEQFINEVAILSQINHRN-VVKLLGCCLETE----- 459 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~----- 459 (700)
...|..+++||+|+||+||+|+.+ +|+.||+|++....+ .......+|+.+|++++|+| |+++++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 455677788999999999999965 789999999876433 24466789999999999999 999999999877
Q ss_pred -cceEEEeeCCCCCHHHHHhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 460 -VPLLVYEFIPNGTLYQYIHDQTEE-FPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 460 -~~~lv~E~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
..++|+||+ .-+|.+++...... ..++...+..++.||+.||+|||+++ |+||||||.||||+++|.+||+|||
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccc
Confidence 778999999 56999999876532 33777899999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCceeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcc
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENR 616 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 616 (700)
+++....+... .+..++|..|.|||++.+. .|+...||||+|||+.||+++++.|.+....+....+-..+....+..
T Consensus 166 lAra~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 166 LARAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred hHHHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 99976533332 4556799999999999886 799999999999999999999999987765322111111111111111
Q ss_pred hhhhc-------------chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH--HHhc
Q 005355 617 LFEVL-------------DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE--LGGI 665 (700)
Q Consensus 617 ~~~~~-------------d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~--L~~l 665 (700)
|..+. .+......-........+++.+||+.+|.+|.|++.++++ +..+
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 11111 0000000001112468899999999999999999999986 5544
No 87
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.8e-37 Score=328.43 Aligned_cols=241 Identities=25% Similarity=0.325 Sum_probs=198.3
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
+.||+|+||.||++... +++.||+|++... .......+.+|+++++.++||||+++++.+...+..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 47999999999999975 6899999987642 2344567789999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeee
Q 005355 472 TLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTT 551 (700)
Q Consensus 472 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~ 551 (700)
+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++....... ....
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~ 153 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMK 153 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Cccc
Confidence 9999987653 3899999999999999999999999 9999999999999999999999999987532221 2223
Q ss_pred eeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCH
Q 005355 552 RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKE 631 (700)
Q Consensus 552 ~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 631 (700)
...|++.|+|||++.+..++.++||||||+++|||++|+.||...+..+. ...+..... ..+.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-------~~~~~~~~~----------~~p~ 216 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-------FELILMEEI----------RFPR 216 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH-------HHHHhcCCC----------CCCC
Confidence 35689999999999999999999999999999999999999975543221 111111110 1122
Q ss_pred HHHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 632 EEIITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 632 ~~~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
.....+.+|+.+||+.||++|| ++.++++
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 217 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 3455788999999999999998 8888876
No 88
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.9e-37 Score=323.22 Aligned_cols=261 Identities=25% Similarity=0.376 Sum_probs=197.3
Q ss_pred cCCCccceEeeeCCeEEEEEEEc--CCcEEEEEEccccC--hhhHHHHHHHHHHHhhc---CCCceeeEEeEEE-----e
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT--NGRIVAIKKSKLVD--ESNIEQFINEVAILSQI---NHRNVVKLLGCCL-----E 457 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~-----~ 457 (700)
++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 47899999999999999999863 46889999876432 22334566787777765 6999999999885 2
Q ss_pred CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 458 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
....++|+||++ ++|.+++..... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcccc
Confidence 346789999996 699999976533 24899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH---h
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK---E 614 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~ 614 (700)
++...... .......+++.|+|||++.+..++.++||||||+++|||++|.+||......+.... ...... .
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~---i~~~~~~~~~ 230 (290)
T cd07862 156 LARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK---ILDVIGLPGE 230 (290)
T ss_pred ceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHH---HHHHhCCCCh
Confidence 99754322 223345689999999999988999999999999999999999999987654332111 111100 0
Q ss_pred cchh-------hhcc---hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 615 NRLF-------EVLD---ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 615 ~~~~-------~~~d---~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+. .... ..............+.+|+.+||+.+|++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000 0000 00001111223456789999999999999999999985
No 89
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=330.26 Aligned_cols=247 Identities=25% Similarity=0.332 Sum_probs=203.4
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEcC--CcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLTN--GRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
..++|++.+.||+|+||.||+|.++. +..||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 34679999999999999999998653 368999987542 2334567889999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++...
T Consensus 108 lv~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 9999999999999997654 3899999999999999999999999 999999999999999999999999999764
Q ss_pred ccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 543 MIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 543 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
... .....||+.|+|||++.+..++.++||||||+++|||++|..||....... ....+..+..
T Consensus 182 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-------~~~~i~~~~~----- 245 (340)
T PTZ00426 182 DTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL-------IYQKILEGII----- 245 (340)
T ss_pred CCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH-------HHHHHhcCCC-----
Confidence 321 234568999999999999899999999999999999999999997654321 1111111111
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRP-----TMKEAAFE 661 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~~ 661 (700)
..+......+.+++++||+.+|++|+ +++++++.
T Consensus 246 -----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 -----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 11222345678899999999999995 88888764
No 90
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-37 Score=330.04 Aligned_cols=264 Identities=27% Similarity=0.416 Sum_probs=204.3
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
..++|++.++||+|+||.||++.+. ++..+|+|.+... .....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 3578999999999999999999986 5788999987653 3344577999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
||+++++|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 83 EHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 9999999999997643 388999999999999999999975 6 99999999999999999999999999875432
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHH--------------
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLE-------------- 610 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~-------------- 610 (700)
. ......++..|+|||++.+..++.++||||||+++|||++|+.||......+..........
T Consensus 157 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T cd06650 157 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP 233 (333)
T ss_pred h---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence 1 12234588999999999998999999999999999999999999975443221100000000
Q ss_pred ------HHHh-----cchhhhcchhhhhc---c-CHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 611 ------AMKE-----NRLFEVLDARVLKE---A-KEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 611 ------~~~~-----~~~~~~~d~~~~~~---~-~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.... .....+.+...... . ......++.+|+.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0000 00000000000000 0 0113456889999999999999999999976
No 91
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-38 Score=343.92 Aligned_cols=263 Identities=22% Similarity=0.360 Sum_probs=219.0
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEcCC-cEEEEEEccccChhhHHHHHHHHHHHhhcC-CCceeeEEeE-EEe----
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLTNG-RIVAIKKSKLVDESNIEQFINEVAILSQIN-HRNVVKLLGC-CLE---- 457 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~---- 457 (700)
+.+...++++.+.|.+|||+.||.|....+ ..+|+|++...++...+.+++|+++|++|. |+|||.+++. ...
T Consensus 32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred EEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 445567788899999999999999998765 999999998889999999999999999996 9999999993 221
Q ss_pred --CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEee
Q 005355 458 --TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535 (700)
Q Consensus 458 --~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~D 535 (700)
.-+.+|+|||+.+|.|-|++...-... |++.++++|+.|+++|+++||... +||||||||-+||||+.+++.||+|
T Consensus 112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred CceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCc
Confidence 124579999999999999998654433 999999999999999999999987 6799999999999999999999999
Q ss_pred cCCCcccccCCcee--------eeeeeccccccccccc---ccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhH
Q 005355 536 FGASRSVMIDQTHL--------TTRVQGTFGYLDPEYF---RSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSL 604 (700)
Q Consensus 536 fGl~~~~~~~~~~~--------~~~~~gt~~y~aPE~~---~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~ 604 (700)
||.+.......... .-...-|+.|+|||++ .+...++|+|||+|||+||-|+....||+....
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~------ 263 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK------ 263 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc------
Confidence 99887543222110 0112368999999986 567899999999999999999999999975421
Q ss_pred HHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 605 VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 605 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
..|++..........+...|.+||+.||+.||++||++-+|++.+-.+...
T Consensus 264 -------------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 264 -------------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -------------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 234454444444567889999999999999999999999999999877653
No 92
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.7e-37 Score=330.98 Aligned_cols=270 Identities=26% Similarity=0.392 Sum_probs=201.1
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC-----cce
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETE-----VPL 462 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 462 (700)
+|++.++||+|+||.||+|... +++.||||++... .......+.+|++++++++||||+++++++...+ ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5788999999999999999975 6899999987642 2334467889999999999999999999886432 468
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+||||++ ++|.+++.... .+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 68999887543 3899999999999999999999999 999999999999999999999999999754
Q ss_pred ccCCc--eeeeeeeccccccccccccc--CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--------HH
Q 005355 543 MIDQT--HLTTRVQGTFGYLDPEYFRS--SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF--------LE 610 (700)
Q Consensus 543 ~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~--------~~ 610 (700)
..... .......+++.|+|||++.+ ..++.++||||||+++|||++|+.||............... ..
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 32221 11234568999999999876 67899999999999999999999999765432211111000 00
Q ss_pred HHHhcchhhhcc---hhhh---hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH--HHhchh
Q 005355 611 AMKENRLFEVLD---ARVL---KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE--LGGIRA 667 (700)
Q Consensus 611 ~~~~~~~~~~~d---~~~~---~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~--L~~l~~ 667 (700)
.+........+. .... ..........+.+++.+||+.+|++|||++|+++. ++++..
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 000000000000 0000 00001224567899999999999999999999974 444433
No 93
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.1e-37 Score=335.94 Aligned_cols=255 Identities=24% Similarity=0.317 Sum_probs=204.6
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
...++|++.++||+|+||.||+++.. +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34678999999999999999999976 6889999987642 2334456789999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+||||+++|+|.+++.... +++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...
T Consensus 120 lv~Ey~~gg~L~~~l~~~~----l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNYD----IPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEEcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 9999999999999997543 888899999999999999999999 999999999999999999999999999765
Q ss_pred ccCCceeeeeeecccccccccccccC----CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchh
Q 005355 543 MIDQTHLTTRVQGTFGYLDPEYFRSS----QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF 618 (700)
Q Consensus 543 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (700)
............||+.|+|||++.+. .++.++||||||+++|||++|+.||........ +..........
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------~~~i~~~~~~~ 266 (370)
T cd05596 193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT------YSKIMDHKNSL 266 (370)
T ss_pred cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH------HHHHHcCCCcC
Confidence 43322223345699999999998653 478899999999999999999999976543221 11111110000
Q ss_pred hhcchhhhhccCHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 005355 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKK--RPTMKEAAFE 661 (700)
Q Consensus 619 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPs~~evl~~ 661 (700)
. -......+..+.+|+.+||+.+|.+ ||+++|+++.
T Consensus 267 ~-------~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 267 T-------FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred C-------CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 0011234567889999999999988 9999999764
No 94
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.3e-37 Score=322.77 Aligned_cols=263 Identities=24% Similarity=0.370 Sum_probs=200.3
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE-SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999976 688999998875332 233567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|++ ++|.+++..... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 995 688888875432 3889999999999999999999999 9999999999999999999999999987542221
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc---chhh---
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN---RLFE--- 619 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~--- 619 (700)
.......+++.|+|||++.+ ..++.++||||||+++|||++|..||........ ............ .+..
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 158 -HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD--QLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred -ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhCCCChhhccchhh
Confidence 22233458899999999865 4588999999999999999999999986543211 111111110000 0000
Q ss_pred --hcch---------hhhhcc-CHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 --VLDA---------RVLKEA-KEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 --~~d~---------~~~~~~-~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...+ .+.... .......+.+|+.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000 000000 0012346789999999999999999999986
No 95
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-37 Score=344.09 Aligned_cols=252 Identities=24% Similarity=0.298 Sum_probs=207.1
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-C-CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-N-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..|.+.+.||+|+||.||+|... + ++.||+|............+.+|+.+++.++||||+++++.+...+..+|||||
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 34889999999999999999865 3 678899987766666667788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
+++|+|.++++.. ....++++..+..++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++......
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999998653 23345899999999999999999999999 9999999999999999999999999998654322
Q ss_pred c-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 547 T-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 547 ~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ .......+...
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-------~~~~~~~~~~~------- 289 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-------IMQQVLYGKYD------- 289 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCCC-------
Confidence 1 12334568999999999999999999999999999999999999997543321 11111111110
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+...+..+.+|+.+||+.+|++||+++++++
T Consensus 290 --~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 --PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 112234467899999999999999999999875
No 96
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.4e-37 Score=330.94 Aligned_cols=263 Identities=29% Similarity=0.464 Sum_probs=208.5
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeC
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQI-NHRNVVKLLGCCLET 458 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 458 (700)
.+.++|++.+.||+|+||.||+|.+. .++.||+|+++... ....+.+..|+.++.++ +|+||+++++++...
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 44578999999999999999999743 24789999987532 33456788999999999 899999999988654
Q ss_pred -CcceEEEeeCCCCCHHHHHhccCC-------------------------------------------------------
Q 005355 459 -EVPLLVYEFIPNGTLYQYIHDQTE------------------------------------------------------- 482 (700)
Q Consensus 459 -~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------------------- 482 (700)
...++++||+++++|.+++.....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 567899999999999999865321
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee-eeeeecccc
Q 005355 483 ---EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFG 558 (700)
Q Consensus 483 ---~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~-~~~~~gt~~ 558 (700)
...+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||++..+....... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 125899999999999999999999999 9999999999999999999999999998654332221 223345678
Q ss_pred cccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHH
Q 005355 559 YLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITV 637 (700)
Q Consensus 559 y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l 637 (700)
|+|||++.+..++.++||||||++|+||++ |..||......+. +...+..+... ..+......+
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~------~~~~~~~~~~~---------~~~~~~~~~~ 305 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE------FCRRLKEGTRM---------RAPEYATPEI 305 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH------HHHHHhccCCC---------CCCccCCHHH
Confidence 999999999999999999999999999998 9999976443221 11222221111 1122334578
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 638 AMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 638 ~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
.+++.+||+.+|++||++.|++++|+++..
T Consensus 306 ~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 306 YSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 899999999999999999999999998754
No 97
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.7e-37 Score=316.91 Aligned_cols=260 Identities=24% Similarity=0.347 Sum_probs=210.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||.||+|+.. +++.||||.+.. .+......+.+|+++++.++||||+++++.+.+.+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57899999999999999999975 689999997653 23444567899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 466 EFIPNGTLYQYIHDQTE-EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
||+++++|.+++..... ...+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999999865322 234889999999999999999999999 99999999999999999999999999876532
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
... ......+++.|+|||.+.+..++.++||||||+++|||++|..||....... .. +...+......
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~----~~-~~~~~~~~~~~------ 226 (267)
T cd08228 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL----FS-LCQKIEQCDYP------ 226 (267)
T ss_pred hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH----HH-HHHHHhcCCCC------
Confidence 221 1223457889999999998889999999999999999999999986443221 11 11111111111
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
.......+..+.+++.+||+.+|++||++.++++.|++++
T Consensus 227 --~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 227 --PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred --CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1111234567899999999999999999999999999875
No 98
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1e-37 Score=331.55 Aligned_cols=252 Identities=23% Similarity=0.322 Sum_probs=204.6
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||+||++... +++.||+|+++.. .....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47889999999999999999976 6889999988753 2334567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++++|.+++..... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 99999999999987532 3899999999999999999999999 999999999999999999999999999866444
Q ss_pred Cceeeeeeecccccccccccc------cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFR------SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~------~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
.........||+.|+|||++. ...++.++||||||+++|||++|..||......+. +...........
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~------~~~i~~~~~~~~ 229 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT------YNNIMNFQRFLK 229 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH------HHHHHcCCCccC
Confidence 333334456899999999986 45678999999999999999999999976543221 111111111100
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
. ......+..+.+|+.+||+ +|++||+++++++
T Consensus 230 ~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 230 F-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred C-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0 0111245568889999998 9999999999986
No 99
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.3e-37 Score=320.32 Aligned_cols=256 Identities=25% Similarity=0.455 Sum_probs=206.3
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-----CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-----NGRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
++|++.+.||+|+||.||+|.+. .++.|++|.+.. ........+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 56888899999999999999852 467899999874 334445788999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC
Q 005355 464 VYEFIPNGTLYQYIHDQTE--------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY 529 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~ 529 (700)
+|||+++++|.+++..... ...+++..++.++.|++.||+|||+++ ++||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 9999999999999964321 234789999999999999999999999 99999999999999999
Q ss_pred cEEEeecCCCcccccCCc-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHH
Q 005355 530 RAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGY 607 (700)
Q Consensus 530 ~~kl~DfGl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 607 (700)
.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~------- 234 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE------- 234 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 999999999976543221 12223345678999999988889999999999999999998 999987544322
Q ss_pred HHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 608 FLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 608 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
........... ..+...+..+.+++.+||+.+|.+||++.+++++|+.
T Consensus 235 ~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 VIEMVRKRQLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11222221111 1122334578899999999999999999999999864
No 100
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-37 Score=334.22 Aligned_cols=252 Identities=25% Similarity=0.333 Sum_probs=206.0
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||+||+|+.. +++.||||++... .......+.+|++++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47899999999999999999976 6899999997642 2244567899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||||+.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 9999999999998762 3899999999999999999999999 999999999999999999999999999765433
Q ss_pred C----------------------------ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCC
Q 005355 546 Q----------------------------THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597 (700)
Q Consensus 546 ~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~ 597 (700)
. ........||+.|+|||++.+..++.++||||||++||||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 112234568999999999999999999999999999999999999998665
Q ss_pred chhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC-HHHHHHH
Q 005355 598 SEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT-MKEAAFE 661 (700)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs-~~evl~~ 661 (700)
..+. ......... ..........+..+.+|+.+||. +|.+||+ ++++++.
T Consensus 235 ~~~~------~~~i~~~~~-------~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 LQET------YNKIINWKE-------SLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHH------HHHHhccCC-------cccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 3221 111111000 00000011145678899999998 9999999 9999974
No 101
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.4e-37 Score=323.47 Aligned_cols=272 Identities=24% Similarity=0.394 Sum_probs=212.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCc--EEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGR--IVAIKKSKLV-DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 463 (700)
.++|++.+.||+|+||.||+|.++ ++. .+++|.++.. .......+.+|++++.++ +|+||+++++++.+.+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 467889999999999999999975 343 4678876643 344557889999999999 89999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCc
Q 005355 464 VYEFIPNGTLYQYIHDQTE-------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR 530 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~ 530 (700)
|+||+++++|.++++.... ...+++..++.++.||+.||+|||+++ ++||||||+|||++.++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence 9999999999999975421 124889999999999999999999999 999999999999999999
Q ss_pred EEEeecCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHH
Q 005355 531 AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFL 609 (700)
Q Consensus 531 ~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 609 (700)
+||+|||++...... ........+..|+|||++.+..++.++||||||++++||++ |..||......+. .
T Consensus 163 ~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-------~ 233 (303)
T cd05088 163 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-------Y 233 (303)
T ss_pred EEeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH-------H
Confidence 999999998632111 11111224567999999988889999999999999999998 9999975443221 1
Q ss_pred HHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcCCCccCCCCCcc
Q 005355 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIGDSIMQHNCDDI 681 (700)
Q Consensus 610 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~~~~~~~~~~~~ 681 (700)
....... ....+...+..+.+|+.+||+.+|++||++.+++++|+++.........+.--++.
T Consensus 234 ~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~~~~~~~~~~ 296 (303)
T cd05088 234 EKLPQGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTLYEKF 296 (303)
T ss_pred HHHhcCC---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhhhhhhhhccC
Confidence 1111110 00111223456889999999999999999999999999887666555544433333
No 102
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=329.11 Aligned_cols=262 Identities=28% Similarity=0.478 Sum_probs=222.5
Q ss_pred HHHHHhcCCCccceEeeeCCeEEEEEEEcC---C--cEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 005355 384 ELEMATDNFNTNRILGQGGQGTVYKGMLTN---G--RIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457 (700)
Q Consensus 384 e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~---~--~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 457 (700)
..+.........++||.|-||.||+|.+.+ | -.||||.-+. .+....+.|..|+.+|++++||||++++|++.+
T Consensus 383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 445556667778899999999999999643 3 3589998876 556668999999999999999999999999976
Q ss_pred CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 458 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
. ..+||||+.+-|.|..||...+.. ++...+..++.||..||+|||+.. .|||||..+|||+....-|||+|||
T Consensus 463 ~-P~WivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFG 536 (974)
T KOG4257|consen 463 Q-PMWIVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFG 536 (974)
T ss_pred c-ceeEEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccc
Confidence 5 559999999999999999987654 899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcc
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENR 616 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 616 (700)
+++.+..+..+......-+..|||||.+.-.+++.++|||.|||.+||++. |..||.+....+.
T Consensus 537 LSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV--------------- 601 (974)
T KOG4257|consen 537 LSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV--------------- 601 (974)
T ss_pred hhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce---------------
Confidence 999887666666666566789999999999999999999999999999987 9999987654321
Q ss_pred hhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 617 LFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 617 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
...+...-.-..++.+++.+..|+.+||..+|.+||.+.|+...|+.+..
T Consensus 602 -I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 602 -IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 11122222233456788899999999999999999999999999988776
No 103
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.7e-37 Score=332.75 Aligned_cols=256 Identities=23% Similarity=0.327 Sum_probs=203.5
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcc
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 461 (700)
....++|++.+.||+|+||.||++... +++.||+|.+.. ......+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 344678999999999999999999976 578999998753 2233445688999999999999999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++||||+++|+|.+++.... +++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~~----~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNYD----VPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EEEEcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEeccccee
Confidence 99999999999999997542 889999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCceeeeeeecccccccccccccCC----CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcch
Q 005355 542 VMIDQTHLTTRVQGTFGYLDPEYFRSSQ----FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRL 617 (700)
Q Consensus 542 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (700)
.............||+.|+|||++.... ++.++||||||++||||++|..||......+. +.........
T Consensus 192 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~------~~~i~~~~~~ 265 (370)
T cd05621 192 MDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT------YSKIMDHKNS 265 (370)
T ss_pred cccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH------HHHHHhCCcc
Confidence 5433322234556999999999987643 78899999999999999999999976543221 1111111110
Q ss_pred hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 005355 618 FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKK--RPTMKEAAFE 661 (700)
Q Consensus 618 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPs~~evl~~ 661 (700)
.. .......+..+.+++.+||..++.+ ||++.|+++.
T Consensus 266 ~~-------~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 266 LN-------FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cC-------CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 00 0111234566788999999865544 8999999885
No 104
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.9e-37 Score=314.86 Aligned_cols=254 Identities=27% Similarity=0.391 Sum_probs=205.3
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
.++|++.+.||+|+||.||++.+..+..+|+|++..... ..+.+.+|+.++++++|+|++++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 466889999999999999999988777899998765332 3467889999999999999999998875 45679999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
++++|.++++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++.........
T Consensus 83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 83 GKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 99999999976432 34899999999999999999999999 999999999999999999999999999765332222
Q ss_pred eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......++..|+|||++.+..++.++||||||+++|||++ |..||......+. ...+..+.. .
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-------~~~~~~~~~---------~ 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV-------LEQVERGYR---------M 222 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-------HHHHHcCCC---------C
Confidence 2222345678999999998899999999999999999999 8999975443221 111111100 0
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
..+...+..+.+++.+||+.+|++||+++++++.|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1122345678999999999999999999999999975
No 105
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.3e-37 Score=319.45 Aligned_cols=267 Identities=29% Similarity=0.444 Sum_probs=203.8
Q ss_pred CCccceEeeeCCeEEEEEEE-----cCCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--CcceE
Q 005355 392 FNTNRILGQGGQGTVYKGML-----TNGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVPLL 463 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 463 (700)
|+..+.||+|+||+||++.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 48889999999999988653 257789999887543 33457788999999999999999999988754 35789
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
+|||+++++|.+++.... +++..++.++.|++.||+|||+++ ++||||||+|||+++++.+||+|||+++...
T Consensus 86 v~e~~~~~~l~~~~~~~~----l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPKHK----LNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHHcC----CCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999999997643 899999999999999999999999 9999999999999999999999999997654
Q ss_pred cCCce--eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 544 IDQTH--LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 544 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
..... ......++..|+|||.+.+..++.++||||||++++||++|..||........ ..............+.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhhhh
Confidence 32211 11122356679999999988999999999999999999999999865432110 0000000000000111111
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
+.......+...+..+.+++.+||+.+|++|||+++++++|+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111111122334568999999999999999999999999998874
No 106
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.9e-37 Score=325.23 Aligned_cols=242 Identities=25% Similarity=0.367 Sum_probs=197.4
Q ss_pred cceEeeeCCeEEEEEEEc----CCcEEEEEEcccc----ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 395 NRILGQGGQGTVYKGMLT----NGRIVAIKKSKLV----DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
+++||+|+||.||+++.. .++.||||.++.. .......+.+|+++++.++||||+++++.+...+..++|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 368999999999999853 5789999987642 22334567899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 81 YLSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999997653 3788999999999999999999999 9999999999999999999999999987543222
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+..+..
T Consensus 155 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-------~~~~~~~~~~--------- 217 (323)
T cd05584 155 -TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-------TIDKILKGKL--------- 217 (323)
T ss_pred -CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC---------
Confidence 22233568999999999999899999999999999999999999997654322 1111111111
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
..+......+.+|+.+||+.+|++|| +++++++
T Consensus 218 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 218 -NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 11223345688999999999999999 7888776
No 107
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.5e-37 Score=315.91 Aligned_cols=257 Identities=26% Similarity=0.416 Sum_probs=210.0
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
...++|++.++||+|+||.||+|..++++.||||.+..... ..+++.+|+.++++++|+|++++++++......++|||
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 45678999999999999999999988788999998875433 34779999999999999999999999998889999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++..... ..+++..+..++.|++.||+|||+++ ++|+||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 82 YMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred ccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 9999999999987532 24899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
.........+..|+|||.+.+..++.++||||||+++++|++ |+.||....... ....+..+. .
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-------~~~~~~~~~-~------- 222 (261)
T cd05034 158 YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-------VLEQVERGY-R------- 222 (261)
T ss_pred hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCC-C-------
Confidence 222222234568999999998899999999999999999998 999996543221 111111110 0
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
...+...+..+.+++.+||+.+|++||+++++++.|+.
T Consensus 223 -~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 -MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 01112234578899999999999999999999999875
No 108
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.7e-37 Score=313.34 Aligned_cols=247 Identities=26% Similarity=0.422 Sum_probs=198.6
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
+.||+|+||.||+|++. +++.||+|..... .......+.+|++++++++|+||+++++++...+..++|+||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999975 6889999987643 344557799999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee-ee
Q 005355 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT-TR 552 (700)
Q Consensus 474 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~-~~ 552 (700)
.+++..... .+++..++.++.|++.||+|||+++ ++||||||+|||++.++.+||+|||++........... ..
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 81 LTFLRTEGP--RLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 999975432 3899999999999999999999999 99999999999999999999999999875432111100 11
Q ss_pred eecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCH
Q 005355 553 VQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKE 631 (700)
Q Consensus 553 ~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 631 (700)
...+..|+|||.+.+..++.++||||||+++|||++ |..||......+. ....... .....+.
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-------~~~~~~~---------~~~~~~~ 219 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-------REAIEQG---------VRLPCPE 219 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-------HHHHHcC---------CCCCCcc
Confidence 123457999999999999999999999999999998 8888865433221 1111111 0111122
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 632 EEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 632 ~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
..+..+.+|+.+||+.+|++|||+.+++++|+
T Consensus 220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 34567889999999999999999999999986
No 109
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3e-37 Score=332.67 Aligned_cols=251 Identities=25% Similarity=0.374 Sum_probs=201.9
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.++||+|+||+||+++.. +++.||||++... .......+.+|++++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47899999999999999999976 6889999998642 2344567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999997653 3899999999999999999999999 999999999999999999999999998754221
Q ss_pred Cce-------------------------------------eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh
Q 005355 546 QTH-------------------------------------LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588 (700)
Q Consensus 546 ~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt 588 (700)
... ......||+.|+|||++....++.++||||||+++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 100 0112358999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC---HHHHHH
Q 005355 589 GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT---MKEAAF 660 (700)
Q Consensus 589 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs---~~evl~ 660 (700)
|..||......+. ............. ......+..+.+|+.+||. +|.+|++ ++|+++
T Consensus 235 G~~Pf~~~~~~~~------~~~i~~~~~~~~~-------~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 235 GYPPFCSDNPQET------YRKIINWKETLQF-------PDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCCHHHH------HHHHHcCCCccCC-------CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999976543321 1111110000000 0011234567889999997 9999998 888877
No 110
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.1e-37 Score=324.81 Aligned_cols=248 Identities=25% Similarity=0.395 Sum_probs=198.2
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||.||++.+. +++.||||+++.. .....+.+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 47999999999999976 6889999988742 233456788999999988 799999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~ 153 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTT 153 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC-CCcc
Confidence 99999987553 3999999999999999999999999 999999999999999999999999998743221 1223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchh--hhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE--DKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||......+ ......+....+..... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 223 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI----------R 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC----------C
Confidence 34568999999999999999999999999999999999999997433221 11111222222222211 1
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCC------HHHHHH
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPT------MKEAAF 660 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs------~~evl~ 660 (700)
.+......+.+++.+||+.||.+||+ ++++++
T Consensus 224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 224 IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 12233456889999999999999997 567764
No 111
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.6e-37 Score=315.03 Aligned_cols=255 Identities=27% Similarity=0.461 Sum_probs=204.1
Q ss_pred CCccceEeeeCCeEEEEEEEcC----CcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc-----
Q 005355 392 FNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEV----- 460 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 460 (700)
|++.+.||+|+||.||+|.+.. +..||||+++.. .....+.+.+|+++++.++|+||+++++.+.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678999999999999999652 367999988753 33445789999999999999999999998876554
Q ss_pred -ceEEEeeCCCCCHHHHHhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeec
Q 005355 461 -PLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDF 536 (700)
Q Consensus 461 -~~lv~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~Df 536 (700)
.++++||+++++|.+++.... ....+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 789999999999999986542 2235899999999999999999999999 999999999999999999999999
Q ss_pred CCCcccccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHh
Q 005355 537 GASRSVMIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKE 614 (700)
Q Consensus 537 Gl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 614 (700)
|+++......... ......+..|+|||++.+..++.++||||||+++|||++ |..||......+ .......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~-------~~~~~~~ 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE-------IYDYLRH 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHc
Confidence 9998654332221 112234678999999998999999999999999999999 889986544322 1111221
Q ss_pred cchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 615 NRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 615 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
+... ..+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 231 ~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GNRL---------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCC---------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111 11233456789999999999999999999999999876
No 112
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.3e-37 Score=332.45 Aligned_cols=252 Identities=22% Similarity=0.293 Sum_probs=199.4
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.|++++.||+|+||+||+|+.. +++.||||++... .....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888999999999999999975 6789999988642 23445678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||||+.++++||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999997654 3899999999999999999999999 9999999999999999999999999975431100
Q ss_pred c----------------------------------------------eeeeeeecccccccccccccCCCCcccceehHH
Q 005355 547 T----------------------------------------------HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFG 580 (700)
Q Consensus 547 ~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG 580 (700)
. .......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 001234699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhc--cCCCCCCCHHHH
Q 005355 581 VVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLN--MIGKKRPTMKEA 658 (700)
Q Consensus 581 ~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~--~~p~~RPs~~ev 658 (700)
+++|||++|..||......+.. ......... +..........++.+|+.+|+. .++..||+++|+
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~------~~i~~~~~~-------~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~ 302 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQ------LKVINWENT-------LHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDI 302 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHH------HHHHccccc-------cCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHH
Confidence 9999999999999765433211 111110000 0001111234567888988554 455569999999
Q ss_pred HHH
Q 005355 659 AFE 661 (700)
Q Consensus 659 l~~ 661 (700)
+..
T Consensus 303 l~h 305 (381)
T cd05626 303 KAH 305 (381)
T ss_pred hcC
Confidence 874
No 113
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.7e-37 Score=313.88 Aligned_cols=257 Identities=23% Similarity=0.408 Sum_probs=209.0
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
+..++|++.++||+|+||.||++.+..+..+++|.+.... ...+.+.+|++++++++|+||+++++.+.+ ...+++||
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITE 80 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEE
Confidence 4567899999999999999999998778889999877532 345788999999999999999999999887 77899999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++..... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 81 FMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred eCCCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 9999999999976432 34889999999999999999999999 9999999999999999999999999987654322
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
........++..|+|||++....++.++|+||||+++++|++ |..||....... ....+..+...
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~-------~~~~~~~~~~~------- 222 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-------VIRALERGYRM------- 222 (260)
T ss_pred cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHhCCCCC-------
Confidence 222222345678999999998889999999999999999998 999997543322 11112211110
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
......+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 223 --~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 223 --PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred --CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 11223445788999999999999999999999999763
No 114
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.4e-37 Score=312.27 Aligned_cols=251 Identities=29% Similarity=0.466 Sum_probs=208.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
.++|++.+.||+|+||.||++... ++.||+|.++.... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 567889999999999999999876 78999999876544 5678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
++++|.+++..... ..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~-- 156 (256)
T cd05039 83 AKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ-- 156 (256)
T ss_pred CCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc--
Confidence 99999999976542 24899999999999999999999999 9999999999999999999999999997652221
Q ss_pred eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
.....+..|+|||++....++.++||||||++++||++ |..||......+ .......+.. .
T Consensus 157 --~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~---------~ 218 (256)
T cd05039 157 --DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPHVEKGYR---------M 218 (256)
T ss_pred --ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHhcCCC---------C
Confidence 12335668999999998899999999999999999997 999987554322 1111111110 1
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
..+...+..+.+++.+||..+|++||+++|++++|+++
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 11223456788999999999999999999999999764
No 115
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.1e-37 Score=311.13 Aligned_cols=247 Identities=26% Similarity=0.449 Sum_probs=201.0
Q ss_pred ceEeeeCCeEEEEEEEcCCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHH
Q 005355 396 RILGQGGQGTVYKGMLTNGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLY 474 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 474 (700)
++||+|+||.||+|...+++.+|+|++.... ......+.+|++++++++|+||+++++.+...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 4689999999999998888999999877543 333457899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeeee
Q 005355 475 QYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554 (700)
Q Consensus 475 ~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~~ 554 (700)
+++..... .+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++...............
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (250)
T cd05085 81 SFLRKKKD--ELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ 155 (250)
T ss_pred HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCC
Confidence 99976533 3889999999999999999999999 999999999999999999999999998754322221112223
Q ss_pred cccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHH
Q 005355 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEE 633 (700)
Q Consensus 555 gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 633 (700)
++..|+|||++.+..++.++||||||+++|+|++ |..||........ ......+.. ...+...
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~-------~~~~~~~~~---------~~~~~~~ 219 (250)
T cd05085 156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA-------REQVEKGYR---------MSCPQKC 219 (250)
T ss_pred CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH-------HHHHHcCCC---------CCCCCCC
Confidence 4667999999998999999999999999999998 9999975533221 111111110 0112234
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 634 IITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 634 ~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
+..+.+++.+||+.+|++||++.|++++|.
T Consensus 220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 220 PDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 567899999999999999999999999885
No 116
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5e-37 Score=318.51 Aligned_cols=257 Identities=26% Similarity=0.438 Sum_probs=208.5
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
..+|+..++||+|+||.||++... ++..+|+|.+........+.+.+|+++++.++|+||+++++++.+.+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 467888999999999999999742 35689999988777777788999999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCc
Q 005355 463 LVYEFIPNGTLYQYIHDQTE------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR 530 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~ 530 (700)
+++||+++++|.+++..... ...+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCC
Confidence 99999999999999976432 124889999999999999999999999 999999999999999999
Q ss_pred EEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHH
Q 005355 531 AKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYF 608 (700)
Q Consensus 531 ~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 608 (700)
+||+|||++......... ......+++.|+|||++.+..++.++||||||+++|||++ |..||......+.
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~------- 233 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA------- 233 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-------
Confidence 999999998755332211 1222335678999999999999999999999999999998 8999865433221
Q ss_pred HHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 609 LEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 609 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
......+.. ...+...+..+.+|+.+||+.+|.+||+++||++.|+.
T Consensus 234 ~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 IECITQGRE---------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHcCcc---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 111111110 01112344568899999999999999999999999863
No 117
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7.5e-37 Score=318.84 Aligned_cols=258 Identities=28% Similarity=0.427 Sum_probs=207.2
Q ss_pred CCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
+|++.+.||+|+||.||+|... ....+++|.+.... ....+++.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4788899999999999999853 23578898876533 3445789999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCc
Q 005355 464 VYEFIPNGTLYQYIHDQTE---------------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSAN 522 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~N 522 (700)
++||+.+++|.+++..... ...+++..++.++.|++.||+|||+.+ ++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 9999999999999875321 134889999999999999999999999 9999999999
Q ss_pred EEECCCCcEEEeecCCCcccccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchh
Q 005355 523 ILLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600 (700)
Q Consensus 523 ILl~~~~~~kl~DfGl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~ 600 (700)
||+++++.+||+|||+++......... .....++..|+|||++.+..++.++||||||++++||++ |..||......+
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 999999999999999997653332211 122345678999999988899999999999999999998 999997654332
Q ss_pred hhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
. ........ ....+...+..+.+++.+||+.+|++||++.|+++.|+++-.
T Consensus 238 ~-------~~~~~~~~---------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 238 L-------FNLLKTGY---------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred H-------HHHHhCCC---------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1 11111111 011122344578899999999999999999999999998754
No 118
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.5e-36 Score=312.17 Aligned_cols=259 Identities=26% Similarity=0.408 Sum_probs=212.0
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||.||+|... +++.||+|.++. .+....+.+.+|++++++++|+|++++++.+.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 67999999999999999999987 789999998753 33344678999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 466 EFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
||+++++|.+++.... ....+++..++.++.|++.||+|||+.+ ++||||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999997532 2345899999999999999999999999 99999999999999999999999999875432
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ... .......+..
T Consensus 159 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~-~~~~~~~~~~------- 225 (267)
T cd08224 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYS-LCKKIEKCDY------- 225 (267)
T ss_pred CCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHH-HHhhhhcCCC-------
Confidence 221 123345788999999999999999999999999999999999998644321 111 1111111111
Q ss_pred hhhccC-HHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 625 VLKEAK-EEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 625 ~~~~~~-~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
...+ ...+..+.+++.+||..+|++||++.+|+++|+++.
T Consensus 226 --~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 226 --PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1111 144557889999999999999999999999999875
No 119
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=6.1e-37 Score=324.73 Aligned_cols=244 Identities=26% Similarity=0.363 Sum_probs=196.6
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHH---hhcCCCceeeEEeEEEeCCcceEE
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAIL---SQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
|++.+.||+|+||.||++.+. +++.||||+++.. .....+.+.+|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 677899999999999999976 6899999998643 233345677776665 456799999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|||+++++|..+++.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999988653 3899999999999999999999999 99999999999999999999999999875322
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
.. .......|++.|+|||++.+..++.++||||||+++|||++|+.||......+. ...+..+..
T Consensus 154 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~-------~~~i~~~~~------- 218 (324)
T cd05589 154 FG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV-------FDSIVNDEV------- 218 (324)
T ss_pred CC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhCCC-------
Confidence 22 223345689999999999999999999999999999999999999976543321 111111111
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
..+...+..+.+++.+||+.||.+|| ++.++++
T Consensus 219 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 219 ---RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 11223355688999999999999999 4666655
No 120
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.8e-37 Score=315.18 Aligned_cols=256 Identities=27% Similarity=0.452 Sum_probs=207.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CC---cEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NG---RIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
.++|+..+.||+|+||.||+|... ++ ..+++|+.+.. .....+.+.+|++++++++|+|++++++++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 567888999999999999999975 23 37999988754 34456789999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
||||+++++|.+++..... .+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999999976432 3899999999999999999999999 9999999999999999999999999987654
Q ss_pred cCCceeee--eeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 544 IDQTHLTT--RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 544 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
........ ....+..|+|||++....++.++||||||+++|||++ |..||......+ ....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~-------~~~~i~~~~~--- 228 (268)
T cd05063 159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE-------VMKAINDGFR--- 228 (268)
T ss_pred cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH-------HHHHHhcCCC---
Confidence 32221111 1223457999999998899999999999999999997 999996543321 1122221110
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.......+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus 229 ------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 229 ------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011123456788999999999999999999999999875
No 121
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=5.5e-37 Score=317.64 Aligned_cols=257 Identities=27% Similarity=0.409 Sum_probs=205.1
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEcC------CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLTN------GRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEV 460 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 460 (700)
..++|++.+.||+|+||.||+|.+.. +..|++|...... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 45779999999999999999999753 5678999876433 3445679999999999999999999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhccCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC---cEEE
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTE----EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY---RAKV 533 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~---~~kl 533 (700)
.++||||+++++|.+++..... ...+++..++.++.||+.||+|||+++ ++||||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976532 124899999999999999999999999 99999999999998654 6999
Q ss_pred eecCCCcccccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHH
Q 005355 534 SDFGASRSVMIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEA 611 (700)
Q Consensus 534 ~DfGl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 611 (700)
+|||+++......... ......+..|+|||++.+..++.++||||||+++|||++ |..||......+. ...
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~-------~~~ 233 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV-------MEF 233 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-------HHH
Confidence 9999998653221111 112223568999999999999999999999999999997 9999976543321 111
Q ss_pred HHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 612 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
+..... ...+...+..+.+++.+||+.+|++||++.+|++.|+
T Consensus 234 ~~~~~~---------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 VTGGGR---------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHcCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111100 1112234567889999999999999999999999986
No 122
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.7e-37 Score=323.08 Aligned_cols=264 Identities=27% Similarity=0.439 Sum_probs=210.9
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc--------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT--------NGRIVAIKKSKLV-DESNIEQFINEVAILSQI-NHRNVVKLLGCCL 456 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 456 (700)
...++|.+.+.||+|+||.||++.+. ....+|+|.++.. .......+.+|+++++.+ +|+||+++++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 33578999999999999999999853 2346999988753 234456788999999999 7999999999999
Q ss_pred eCCcceEEEeeCCCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcE
Q 005355 457 ETEVPLLVYEFIPNGTLYQYIHDQTE-------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANI 523 (700)
Q Consensus 457 ~~~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NI 523 (700)
..+..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+.+ ++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHhe
Confidence 99999999999999999999976432 124899999999999999999999999 99999999999
Q ss_pred EECCCCcEEEeecCCCcccccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhh
Q 005355 524 LLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEED 601 (700)
Q Consensus 524 Ll~~~~~~kl~DfGl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~ 601 (700)
|+++++.+||+|||++.......... .....+++.|+|||++.+..++.++||||||+++|||++ |..||.....++
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~- 250 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE- 250 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-
Confidence 99999999999999987553221111 112224568999999999899999999999999999998 888886544322
Q ss_pred hhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhc
Q 005355 602 KSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669 (700)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~ 669 (700)
+...+..... .+.+...+..+.+|+.+||..+|.+||++.++++.|+++.+..
T Consensus 251 ------~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 251 ------LFKLLKEGHR---------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred ------HHHHHHcCCC---------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 1112222111 1122334567889999999999999999999999999987653
No 123
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.4e-37 Score=330.60 Aligned_cols=249 Identities=26% Similarity=0.346 Sum_probs=196.5
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.++|+..++||+|+||.||++++. +++.||||++... .....+.+.+|+++++.++|+||+++++++.+.+..++|||
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 345667789999999999999976 6899999997643 33445778999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+.. ...+..+..++.||+.||+|||+++ |+||||||+||||++++.+||+|||++.......
T Consensus 153 ~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 153 FMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred cCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99999986532 2567788899999999999999999 9999999999999999999999999997653221
Q ss_pred ceeeeeeeccccccccccccc-----CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
.......||..|+|||++.. ...+.++||||||+++|||++|+.||......+..... .......
T Consensus 223 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~----~~~~~~~----- 292 (353)
T PLN00034 223 -DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM----CAICMSQ----- 292 (353)
T ss_pred -ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH----HHHhccC-----
Confidence 12234568999999998853 23456899999999999999999999743322211111 1110000
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...........+.+|+.+||+.+|++||++.|+++.
T Consensus 293 ----~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 ----PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ----CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011223345678999999999999999999999874
No 124
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.1e-36 Score=323.25 Aligned_cols=243 Identities=27% Similarity=0.412 Sum_probs=194.0
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||.||++... +++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999976 5789999987642 334456678899988876 899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~ 153 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTT 153 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Ccc
Confidence 99999887653 3899999999999999999999999 9999999999999999999999999987532221 122
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchh--hhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE--DKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ......+....+..... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----------~ 223 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----------R 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----------C
Confidence 34568999999999999999999999999999999999999996422211 11111222222222111 1
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCCH
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPTM 655 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs~ 655 (700)
.+......+.+|+.+||+.||++||++
T Consensus 224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 224 IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 222344568899999999999999984
No 125
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7.2e-37 Score=314.75 Aligned_cols=260 Identities=25% Similarity=0.355 Sum_probs=210.5
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||.||++... +++.++||.+.. .+....+.+.+|+.+++.++|+||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46888899999999999999964 789999997654 23344568899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 466 EFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
||+++++|.+++.... ....+++..++.++.||++||+|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999987532 2345899999999999999999999999 99999999999999999999999999875532
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
... ......++..|+|||++.+..++.++||||||+++|+|++|..||........ .......... .+
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~-----~~- 226 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-----SLCKKIEQCD-----YP- 226 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-----HHhhhhhcCC-----CC-
Confidence 221 12234588899999999999999999999999999999999999965432211 1111111111 01
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
.......+..+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus 227 --~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 227 --PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred --CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1111235567899999999999999999999999998864
No 126
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.1e-36 Score=311.85 Aligned_cols=246 Identities=28% Similarity=0.433 Sum_probs=198.7
Q ss_pred eEeeeCCeEEEEEEEc---CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 397 ILGQGGQGTVYKGMLT---NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
.||+|+||.||+|.++ +++.+|+|+++... ....+.+.+|+.+++.++|+||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 57889999876433 345678999999999999999999999875 45678999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee-
Q 005355 472 TLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT- 550 (700)
Q Consensus 472 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~- 550 (700)
+|.+++.... .+++..++.++.|++.||+|||+++ ++||||||.||++++++.+||+|||++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 81 PLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 9999997543 3899999999999999999999999 99999999999999999999999999986543332211
Q ss_pred -eeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 551 -TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 551 -~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
....++..|+|||.+....++.++||||||+++|||++ |..||......+ ....+..+... .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-------~~~~i~~~~~~---------~ 218 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE-------VTQMIESGERM---------E 218 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHCCCCC---------C
Confidence 12234578999999988889999999999999999998 999997654322 12222222111 1
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.+...+..+.+|+.+||+.+|++||++.+|.+.|++.
T Consensus 219 ~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 219 CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1223456788999999999999999999999999763
No 127
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=9e-37 Score=328.57 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=198.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||+||++... +++.||||++... .......+.+|+.++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999976 5889999988642 2334567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||||+.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999997653 3899999999999999999999999 999999999999999999999999998754321
Q ss_pred Cc----------------------------------eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCC
Q 005355 546 QT----------------------------------HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQK 591 (700)
Q Consensus 546 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~ 591 (700)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 00123469999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhcc--CCCCCCCHHHHHHH
Q 005355 592 PIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNM--IGKKRPTMKEAAFE 661 (700)
Q Consensus 592 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~--~p~~RPs~~evl~~ 661 (700)
||......+. ...+........+ ... ......+.+++.+++.. ++..||+++|+++.
T Consensus 235 Pf~~~~~~~~-------~~~i~~~~~~~~~----p~~--~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 235 PFCSETPQET-------YKKVMNWKETLIF----PPE--VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCHHHH-------HHHHHcCcCcccC----CCc--CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 9976543321 1111111000000 011 11334677788886652 33356899999885
No 128
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.4e-37 Score=325.98 Aligned_cols=242 Identities=24% Similarity=0.318 Sum_probs=197.9
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
+.||+|+||.||++... +++.||+|++... .......+.+|+++++.++|+||+++++.+...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999965 6889999987642 2334567788999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 472 TLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 472 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
+|.+++.... .+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~ 153 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATM 153 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-ccc
Confidence 9999987653 38999999999999999999997 68 9999999999999999999999999987532222 222
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||+.|+|||++.+..++.++||||||+++|||++|..||.....++. ...+..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~-------~~~i~~~~~----------~~p 216 (325)
T cd05594 154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL-------FELILMEEI----------RFP 216 (325)
T ss_pred ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH-------HHHHhcCCC----------CCC
Confidence 345689999999999999999999999999999999999999976543221 111111110 112
Q ss_pred HHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRP-----TMKEAAFE 661 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~~ 661 (700)
......+.+|+.+||+.||++|+ ++.++++.
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 22345688999999999999996 89998864
No 129
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.2e-36 Score=313.98 Aligned_cols=255 Identities=25% Similarity=0.465 Sum_probs=200.9
Q ss_pred CCccceEeeeCCeEEEEEEEcC-Cc--EEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC------Cc
Q 005355 392 FNTNRILGQGGQGTVYKGMLTN-GR--IVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLET------EV 460 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 460 (700)
|.+.++||+|+||.||+|.+.. +. .||+|.++.. .....+.+.+|+++++.++|+||+++++.+... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999764 32 6899987653 345567899999999999999999999987532 24
Q ss_pred ceEEEeeCCCCCHHHHHhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 461 PLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
.++++||+++|+|.+++.... ....+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999885321 2234899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhc
Q 005355 538 ASRSVMIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKEN 615 (700)
Q Consensus 538 l~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 615 (700)
+++......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-------~~~~~~~~ 230 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE-------IYDYLRQG 230 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-------HHHHHHcC
Confidence 998654332211 122335678999999999999999999999999999999 889987543321 11122222
Q ss_pred chhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 616 RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 616 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.... .+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 231 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 NRLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111 1123345688999999999999999999999999875
No 130
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8.2e-37 Score=330.08 Aligned_cols=263 Identities=24% Similarity=0.310 Sum_probs=201.5
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC-----cce
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETE-----VPL 462 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 462 (700)
+|++.++||+|+||.||++... +++.||||++... +....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999975 6899999987642 3344577899999999999999999999998776 789
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+|+||+. ++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 68888876543 3899999999999999999999999 999999999999999999999999999765
Q ss_pred ccCCceeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH-------------
Q 005355 543 MIDQTHLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF------------- 608 (700)
Q Consensus 543 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~------------- 608 (700)
............++..|+|||++.+. .++.++||||||+++|||++|+.||......+........
T Consensus 154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence 43333333344578899999998774 5789999999999999999999999866543321111100
Q ss_pred ---HHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 609 ---LEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 609 ---~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+....... ................+.+|+.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 234 EGARAHILRGPHKP-PSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCCCC-CchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000000 00000001112234578899999999999999999999874
No 131
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.2e-36 Score=316.42 Aligned_cols=252 Identities=26% Similarity=0.340 Sum_probs=203.4
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
+|++.++||+|+||+||++... +++.||+|++.... ......+.+|+.++++++|+||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999975 68899999876432 2233567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 9999999999875432 34899999999999999999999999 9999999999999999999999999987643222
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
. .....|+..|+|||++.+..++.++||||||+++|||++|..||......... ..+...+... .
T Consensus 157 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~~~~~----------~ 221 (285)
T cd05605 157 T--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERRVKED----------Q 221 (285)
T ss_pred c--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHHhhhc----------c
Confidence 1 22345899999999999999999999999999999999999999765432211 1111111111 0
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRP-----TMKEAAFE 661 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~~ 661 (700)
...+...+..+.+|+.+||+.||++|| +++++++.
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 112234566788999999999999999 78888664
No 132
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.4e-37 Score=331.76 Aligned_cols=265 Identities=25% Similarity=0.417 Sum_probs=211.0
Q ss_pred HHHHHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcC-CCceeeEEeEE
Q 005355 384 ELEMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQIN-HRNVVKLLGCC 455 (700)
Q Consensus 384 e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 455 (700)
+++...++|.+.++||+|+||.||+|++. .++.||||+++... ....+.+.+|+++|.++. |+||+++++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 35666778999999999999999999864 24689999987542 333457889999999997 99999999999
Q ss_pred EeCCcceEEEeeCCCCCHHHHHhccCC-----------------------------------------------------
Q 005355 456 LETEVPLLVYEFIPNGTLYQYIHDQTE----------------------------------------------------- 482 (700)
Q Consensus 456 ~~~~~~~lv~E~~~~gsL~~~l~~~~~----------------------------------------------------- 482 (700)
...+..++|+||+++|+|.++++....
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 999999999999999999999975421
Q ss_pred ------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 005355 483 ------------------------------------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKS 520 (700)
Q Consensus 483 ------------------------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~ 520 (700)
...+++..++.++.||+.||+|||+.+ ++||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCc
Confidence 123678889999999999999999998 99999999
Q ss_pred CcEEECCCCcEEEeecCCCcccccCCc-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCc
Q 005355 521 ANILLDDKYRAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDS 598 (700)
Q Consensus 521 ~NILl~~~~~~kl~DfGl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~ 598 (700)
+|||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 999999999999999999975432221 11223346788999999998899999999999999999998 8899865433
Q ss_pred hhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
.+. ....+..+.. ...+......+.+|+.+||+.+|.+||+++||++.|+++.
T Consensus 348 ~~~------~~~~~~~~~~---------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 NEQ------FYNAIKRGYR---------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hHH------HHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 221 1111111100 0112233567899999999999999999999999998864
No 133
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.1e-36 Score=315.81 Aligned_cols=256 Identities=23% Similarity=0.421 Sum_probs=203.2
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCc----EEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGR----IVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
++|++.+.||+|+||+||+|.+. +++ .+++|++.... .....++..|+.++++++|+||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 56788899999999999999974 343 47888875432 234467888888999999999999999875 445689
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
++||+++|+|.+++..... .+++..++.++.||+.||+|||+.+ ++||||||+|||+++++.+||+|||+++...
T Consensus 86 i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 9999999999999976533 4899999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 544 IDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 544 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
..... ......++..|+|||++.+..++.++||||||+++|||++ |..||......+. ...+..+....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-------~~~~~~~~~~~-- 231 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-------PDLLEKGERLA-- 231 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-------HHHHHCCCcCC--
Confidence 33221 2233446778999999998899999999999999999998 9999976543321 11122221111
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
. +......+.+++.+||..+|++|||+.|++++|..+..
T Consensus 232 ~-------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 232 Q-------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred C-------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 0 11123457789999999999999999999999988764
No 134
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.6e-37 Score=322.86 Aligned_cols=236 Identities=27% Similarity=0.399 Sum_probs=193.7
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||.||+++.+ +++.||||++... .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999976 5889999987642 234456778888888876 699999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~ 153 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTT 153 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Ccc
Confidence 99999997654 3899999999999999999999999 9999999999999999999999999987532221 223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......+. ...+..+.. ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-------~~~i~~~~~----------~~~ 216 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL-------FEAILNDEV----------VYP 216 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH-------HHHHhcCCC----------CCC
Confidence 345689999999999999999999999999999999999999976543321 111211111 111
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTM 655 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~ 655 (700)
......+.+|+.+||+.||++||++
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 217 TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 2234578899999999999999998
No 135
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.3e-36 Score=322.33 Aligned_cols=241 Identities=25% Similarity=0.367 Sum_probs=196.5
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCC-CceeeEEeEEEeCCcceEEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINH-RNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 465 (700)
+|++.+.||+|+||.||+|+.. +++.||||++... .....+.+..|++++..++| ++|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788999999999999999976 5789999987642 23445678889999999976 46888999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999997654 3899999999999999999999999 999999999999999999999999998743222
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+. ...+.....
T Consensus 155 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-------~~~i~~~~~-------- 218 (324)
T cd05587 155 G-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-------FQSIMEHNV-------- 218 (324)
T ss_pred C-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-------HHHHHcCCC--------
Confidence 2 223345689999999999999999999999999999999999999976543221 111111110
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTM 655 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~ 655 (700)
..+......+.+++.+||..+|.+|++.
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 219 --SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred --CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 1122334568899999999999999986
No 136
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.8e-37 Score=320.96 Aligned_cols=264 Identities=26% Similarity=0.440 Sum_probs=211.6
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc--------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT--------NGRIVAIKKSKLV-DESNIEQFINEVAILSQI-NHRNVVKLLGCCL 456 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 456 (700)
...++|.+.+.||+|+||.||++++. ++..||+|..... .......+.+|+.+++.+ +|+||+++++.+.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 44677889999999999999999742 2457999988643 344567899999999999 8999999999999
Q ss_pred eCCcceEEEeeCCCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcE
Q 005355 457 ETEVPLLVYEFIPNGTLYQYIHDQTE-------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANI 523 (700)
Q Consensus 457 ~~~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NI 523 (700)
.....+++|||+++++|.+++..... ...+++..++.++.||++||+|||+++ ++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceE
Confidence 99999999999999999999976421 134788999999999999999999999 99999999999
Q ss_pred EECCCCcEEEeecCCCcccccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhh
Q 005355 524 LLDDKYRAKVSDFGASRSVMIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEED 601 (700)
Q Consensus 524 Ll~~~~~~kl~DfGl~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~ 601 (700)
|+++++.+||+|||+++......... .....++..|+|||++.+..++.++||||||+++|+|++ |..||......+
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~- 247 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE- 247 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-
Confidence 99999999999999998664322221 222345678999999999899999999999999999998 788886544322
Q ss_pred hhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhc
Q 005355 602 KSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669 (700)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~ 669 (700)
....+..+... ..+...+..+.+|+.+||+.+|.+||++.|+++.|+++....
T Consensus 248 ------~~~~~~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 248 ------LFKLLKEGHRM---------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred ------HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 11122221110 112234567889999999999999999999999999887543
No 137
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=8.7e-37 Score=318.04 Aligned_cols=261 Identities=26% Similarity=0.433 Sum_probs=207.3
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLET 458 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 458 (700)
++..++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.+++.++|+||+++++.+.+.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 345788999999999999999999754 24579999876433 23345688999999999999999999999999
Q ss_pred CcceEEEeeCCCCCHHHHHhccCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcE
Q 005355 459 EVPLLVYEFIPNGTLYQYIHDQTE-------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRA 531 (700)
Q Consensus 459 ~~~~lv~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~ 531 (700)
+..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcE
Confidence 999999999999999999975321 133577889999999999999999999 9999999999999999999
Q ss_pred EEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHH
Q 005355 532 KVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFL 609 (700)
Q Consensus 532 kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 609 (700)
||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....++ ..
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~-------~~ 231 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ-------VL 231 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HH
Confidence 99999998755332211 1122235678999999999999999999999999999998 788987544322 11
Q ss_pred HHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 610 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.....+... ..+...+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 232 ~~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 232 KFVMDGGYL---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 111111110 11122346799999999999999999999999998775
No 138
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.7e-37 Score=341.99 Aligned_cols=258 Identities=26% Similarity=0.327 Sum_probs=207.7
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC--
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETE-- 459 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 459 (700)
.+...++|++.++||+|+||+||++... +++.||||++... .......+.+|+.++..++|+|++++...+...+
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 3445679999999999999999999865 6899999987643 3455677889999999999999999988775432
Q ss_pred ------cceEEEeeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEE
Q 005355 460 ------VPLLVYEFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAK 532 (700)
Q Consensus 460 ------~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~k 532 (700)
..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+ |+||||||+||||+.++.+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEE
Confidence 2579999999999999997542 2345899999999999999999999999 99999999999999999999
Q ss_pred EeecCCCcccccCC-ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHH
Q 005355 533 VSDFGASRSVMIDQ-THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611 (700)
Q Consensus 533 l~DfGl~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 611 (700)
|+|||+++...... ........||+.|+|||++.+..++.++||||||++||||++|+.||......+ ....
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~-------~~~~ 256 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE-------VMHK 256 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-------HHHH
Confidence 99999997654322 122334568999999999999999999999999999999999999997654322 1111
Q ss_pred HHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 612 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+.. ...+...+..+.+|+.+||+.+|.+||++.++++.
T Consensus 257 ~~~~~~---------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 TLAGRY---------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HhcCCC---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 111111 11223345678999999999999999999999863
No 139
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.3e-37 Score=319.41 Aligned_cols=256 Identities=25% Similarity=0.396 Sum_probs=205.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEcC------CcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLTN------GRIVAIKKSKLVDE-SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
.+|++.+.||+|+||.||+|.+.+ ++.||||+++.... ...+.+.+|+.++..++|+||+++++.+.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 457778899999999999998642 47899999875433 33567889999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC
Q 005355 463 LVYEFIPNGTLYQYIHDQT-------------EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY 529 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~ 529 (700)
+++||+++++|.+++.... .+..+++..++.++.|++.||+|||+++ |+||||||+|||+++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCC
Confidence 9999999999999986321 1234888999999999999999999999 99999999999999999
Q ss_pred cEEEeecCCCcccccCCc-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHH
Q 005355 530 RAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGY 607 (700)
Q Consensus 530 ~~kl~DfGl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 607 (700)
.+||+|||+++....... .......+++.|+|||++....++.++||||||+++|||++ |..||......+
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------- 234 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------- 234 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH-------
Confidence 999999999876533222 12223345778999999988889999999999999999998 888887544322
Q ss_pred HHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 608 FLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 608 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
....+...... ..+...+..+.+|+.+||+.+|++||+++++++.|+.
T Consensus 235 ~~~~i~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 VIEMIRNRQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHcCCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 12222222211 1123345668899999999999999999999999875
No 140
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=296.17 Aligned_cols=254 Identities=27% Similarity=0.413 Sum_probs=210.0
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--------hhhHHHHHHHHHHHhhc-CCCceeeEEeEE
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--------ESNIEQFINEVAILSQI-NHRNVVKLLGCC 455 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 455 (700)
+.-.+.|...++||.|..+.|-+..++ .++.+|+|++.... ....+.-++|+.||+++ .||+|+++.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 334567788899999999999988865 68889999865421 12245567899999997 699999999999
Q ss_pred EeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEee
Q 005355 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535 (700)
Q Consensus 456 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~D 535 (700)
......++|+|.|+.|.|.|+|..... ++++...+|++|+++|+.|||.++ ||||||||+|||++++.++||+|
T Consensus 93 es~sF~FlVFdl~prGELFDyLts~Vt---lSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTSKVT---LSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhhhee---ecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEec
Confidence 999999999999999999999987654 999999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccccCCceeeeeeeccccccccccccc------CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH
Q 005355 536 FGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS------SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL 609 (700)
Q Consensus 536 fGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 609 (700)
||++..+.. .......+||++|+|||.+.. ..|+..+|+|++|||||.|+.|.+||-... . ..++
T Consensus 167 FGFa~~l~~--GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-----Q--mlML 237 (411)
T KOG0599|consen 167 FGFACQLEP--GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-----Q--MLML 237 (411)
T ss_pred cceeeccCC--chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-----H--HHHH
Confidence 999987643 334566889999999999854 357889999999999999999999995321 1 1234
Q ss_pred HHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 610 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.++.+++.. .......+......+||.+||+.||.+|.|++|+++
T Consensus 238 R~ImeGkyq------F~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 238 RMIMEGKYQ------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHhcccc------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 555555542 112223556778899999999999999999999987
No 141
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-36 Score=323.51 Aligned_cols=266 Identities=26% Similarity=0.435 Sum_probs=211.0
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEcC--------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCceeeEEeE
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLTN--------GRIVAIKKSKLV-DESNIEQFINEVAILSQI-NHRNVVKLLGC 454 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 454 (700)
++....+|++.+.||+|+||.||++.... ...||+|.++.. .....+.+.+|+++++++ +|+||++++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 34445678999999999999999997531 236899987753 344567899999999999 79999999999
Q ss_pred EEeCCcceEEEeeCCCCCHHHHHhccC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 005355 455 CLETEVPLLVYEFIPNGTLYQYIHDQT-------------EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521 (700)
Q Consensus 455 ~~~~~~~~lv~E~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~ 521 (700)
+.+.+..++++||+++++|.+++.... ....+++..++.++.|++.||+|||+++ ++||||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~ 163 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAAR 163 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccc
Confidence 999999999999999999999997632 1234889999999999999999999999 999999999
Q ss_pred cEEECCCCcEEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCch
Q 005355 522 NILLDDKYRAKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599 (700)
Q Consensus 522 NILl~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~ 599 (700)
|||+++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||.....+
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 243 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 243 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 999999999999999999765332211 1122234567999999999999999999999999999998 88898755433
Q ss_pred hhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhc
Q 005355 600 EDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669 (700)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~ 669 (700)
+ +...+..+.. .+.+......+.+|+.+||+.+|++||++.|+++.|+.+....
T Consensus 244 ~-------~~~~~~~~~~---------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 244 E-------LFKLLKEGHR---------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred H-------HHHHHHcCCC---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 2 1112221111 1112233457889999999999999999999999999987543
No 142
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=6.8e-37 Score=331.32 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=199.5
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.++||+|+||.||++... +++.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47889999999999999999875 6889999987542 2334567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999997643 3899999999999999999999999 999999999999999999999999998633210
Q ss_pred Cce----------------------------------------------eeeeeecccccccccccccCCCCcccceehH
Q 005355 546 QTH----------------------------------------------LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSF 579 (700)
Q Consensus 546 ~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSl 579 (700)
... ......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 0012458999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCC---CCHH
Q 005355 580 GVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKR---PTMK 656 (700)
Q Consensus 580 G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~R---Ps~~ 656 (700)
||++|||++|..||......+. +............ .. .......+.+|+.+||. +|.+| +++.
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~------~~~i~~~~~~~~~-----p~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHET------YRKIINWRETLYF-----PD--DIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHH------HHHHHccCCccCC-----CC--CCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 9999999999999976543221 1111110000000 00 11234568889999998 66665 5999
Q ss_pred HHHHH
Q 005355 657 EAAFE 661 (700)
Q Consensus 657 evl~~ 661 (700)
|+++.
T Consensus 301 ~~l~h 305 (377)
T cd05629 301 EIKSH 305 (377)
T ss_pred HHhcC
Confidence 98874
No 143
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-36 Score=310.78 Aligned_cols=251 Identities=26% Similarity=0.423 Sum_probs=204.0
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-----hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-----ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
++|.+.+.||+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57899999999999999999965 68999999865422 2234678899999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
|+||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999997653 3889999999999999999999999 9999999999999999999999999987553
Q ss_pred cCCceee--eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 544 IDQTHLT--TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 544 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
....... ....++..|+|||++.+..++.++||||||+++|||++|+.||......+. ....... .
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~-~----- 223 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA------IFKIATQ-P----- 223 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH------HHHHhcc-C-----
Confidence 2221111 234577899999999999999999999999999999999999965432211 1111110 0
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.....+......+.+++.+||..+|.+||++.++++.
T Consensus 224 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 224 ---TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ---CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0111223345578899999999999999999999874
No 144
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.7e-36 Score=310.46 Aligned_cols=247 Identities=26% Similarity=0.435 Sum_probs=197.8
Q ss_pred eEeeeCCeEEEEEEEc---CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCC
Q 005355 397 ILGQGGQGTVYKGMLT---NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGT 472 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 472 (700)
.||+|+||.||+|.+. .+..||+|++.... ....+.+.+|+.++++++|+||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999864 35579999887643 334567999999999999999999999875 457799999999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee--
Q 005355 473 LYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT-- 550 (700)
Q Consensus 473 L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~-- 550 (700)
|.+++..... .+++..++.++.|++.||+|||+++ ++||||||+|||++.++.+||+|||++...........
T Consensus 81 L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 81 LNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 9999975432 4899999999999999999999999 99999999999999999999999999975543322211
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhcc
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEA 629 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 629 (700)
....++..|+|||.+....++.++||||||+++|||++ |..||......+ +...+..+.. ...
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~---------~~~ 219 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-------VMSFIEQGKR---------LDC 219 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-------HHHHHHCCCC---------CCC
Confidence 11223578999999998889999999999999999996 999997554322 1111111111 112
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 630 KEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 630 ~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
+...+..+.+++.+||+.+|++||++.+|++.|+.+
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 233456788999999999999999999999999865
No 145
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.1e-36 Score=322.28 Aligned_cols=242 Identities=24% Similarity=0.350 Sum_probs=197.0
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||.||+|+.. +++.||||+++.. .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999976 5789999987642 234456678899998876 799999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~ 153 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILN-GVTT 153 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccC-Cccc
Confidence 99999997654 3899999999999999999999999 999999999999999999999999998753222 2223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||+.|+|||++.+..++.++||||||+++|||++|+.||......+. ...+..+.. ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~-------~~~i~~~~~----------~~p 216 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL-------FESILHDDV----------LYP 216 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH-------HHHHHcCCC----------CCC
Confidence 345689999999999999999999999999999999999999986553321 111111111 011
Q ss_pred HHHHHHHHHHHHHHhccCCCCCC-------CHHHHHHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRP-------TMKEAAFE 661 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RP-------s~~evl~~ 661 (700)
......+.+|+.+||+.+|++|| +++++++.
T Consensus 217 ~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 217 VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 12345688999999999999999 77888753
No 146
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=7e-37 Score=329.78 Aligned_cols=261 Identities=23% Similarity=0.325 Sum_probs=206.3
Q ss_pred hHHHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 005355 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457 (700)
Q Consensus 382 ~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 457 (700)
..++....++|++.+.||+|+||.||++.+. +++.||+|++.. ......+.+.+|+.+++.++||||+++++.+.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3455666789999999999999999999976 578999998753 223344567899999999999999999999999
Q ss_pred CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 458 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
.+..++||||+++|+|.+++.... +++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~~----~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNYD----VPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCC
Confidence 999999999999999999997543 888999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCceeeeeeecccccccccccccCC----CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQ----FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 613 (700)
++...............||+.|+|||++.... ++.++||||||+++|||++|..||....... .+.....
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~ 261 (371)
T cd05622 188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMN 261 (371)
T ss_pred ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH------HHHHHHc
Confidence 99865433322334566999999999987543 7889999999999999999999997654322 1111111
Q ss_pred hcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHHH
Q 005355 614 ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKK--RPTMKEAAFEL 662 (700)
Q Consensus 614 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPs~~evl~~L 662 (700)
....... ......+..+.+++.+||...+.+ ||+++|+++..
T Consensus 262 ~~~~~~~-------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 262 HKNSLTF-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CCCcccC-------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1111111 111234566888999999844433 78999988853
No 147
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.1e-36 Score=319.46 Aligned_cols=261 Identities=28% Similarity=0.437 Sum_probs=209.9
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCceeeEEeEEEe
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQI-NHRNVVKLLGCCLE 457 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 457 (700)
....++|.+.+.||+|+||.||++.+. .+..||||+++... ....+.+.+|+.+++++ +|+||+++++.+..
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 110 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI 110 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec
Confidence 444577999999999999999999752 24579999877543 34457789999999999 79999999999999
Q ss_pred CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 458 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
.+..+++|||+++++|.++++.... ..+++.+++.++.|++.||+|||+++ |+|+||||+|||++.++.+||+|||
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCc
Confidence 9999999999999999999976432 23899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhc
Q 005355 538 ASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKEN 615 (700)
Q Consensus 538 l~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 615 (700)
+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||......+. +......+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~------~~~~~~~~ 260 (302)
T cd05055 187 LARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK------FYKLIKEG 260 (302)
T ss_pred ccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH------HHHHHHcC
Confidence 99865433221 1222345678999999999999999999999999999998 9999875543221 11111111
Q ss_pred chhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 616 RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 616 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
. ....+......+.+++.+||+.+|++||++.|+++.|+++
T Consensus 261 ~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 Y---------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred C---------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1 0011122345789999999999999999999999999874
No 148
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-36 Score=320.84 Aligned_cols=266 Identities=25% Similarity=0.445 Sum_probs=211.5
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc--------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhc-CCCceeeEEeEE
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT--------NGRIVAIKKSKLV-DESNIEQFINEVAILSQI-NHRNVVKLLGCC 455 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 455 (700)
....++|.+.+.||+|+||.||+++.. ....+|+|+++.. .......+.+|+++++++ +|+||+++++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC 87 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence 344578889999999999999999752 2457999987753 334567789999999999 699999999999
Q ss_pred EeCCcceEEEeeCCCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCc
Q 005355 456 LETEVPLLVYEFIPNGTLYQYIHDQTE-------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSAN 522 (700)
Q Consensus 456 ~~~~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~N 522 (700)
.+.+..++++||+++++|.+++..... ...+++..+..++.||+.||.|||+++ ++||||||+|
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~N 164 (314)
T cd05099 88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARN 164 (314)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecccccee
Confidence 999999999999999999999976421 234899999999999999999999999 9999999999
Q ss_pred EEECCCCcEEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchh
Q 005355 523 ILLDDKYRAKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEE 600 (700)
Q Consensus 523 ILl~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~ 600 (700)
||+++++.+||+|||+++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999999865422211 1112224467999999999999999999999999999999 889986554322
Q ss_pred hhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhcC
Q 005355 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASIG 670 (700)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~~ 670 (700)
+...+..+... ..+...+..+.+|+.+||+.+|++||++.|+++.|+++.....
T Consensus 245 -------~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 298 (314)
T cd05099 245 -------LFKLLREGHRM---------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVS 298 (314)
T ss_pred -------HHHHHHcCCCC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhc
Confidence 11222221111 1122334578899999999999999999999999999876553
No 149
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=9.2e-37 Score=330.91 Aligned_cols=250 Identities=22% Similarity=0.306 Sum_probs=198.0
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.|+++++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++|+||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999975 68899999876432 3345678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++|+|.+++.+.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999997653 3889999999999999999999999 9999999999999999999999999975321100
Q ss_pred ----------------------------------------------ceeeeeeecccccccccccccCCCCcccceehHH
Q 005355 547 ----------------------------------------------THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFG 580 (700)
Q Consensus 547 ----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG 580 (700)
........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0001224689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC---HHH
Q 005355 581 VVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT---MKE 657 (700)
Q Consensus 581 ~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs---~~e 657 (700)
|+||||++|+.||......+.. ........ ...........+.+.+++.+|+ .+|++|++ +.|
T Consensus 236 vil~elltG~~Pf~~~~~~~~~------~~i~~~~~-------~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~e 301 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQ------MKVINWQT-------SLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADE 301 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHH------HHHHccCC-------CcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHH
Confidence 9999999999999865433211 11111000 0000111223456777888876 59999997 777
Q ss_pred HHH
Q 005355 658 AAF 660 (700)
Q Consensus 658 vl~ 660 (700)
+++
T Consensus 302 i~~ 304 (382)
T cd05625 302 IKA 304 (382)
T ss_pred Hhc
Confidence 765
No 150
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=8e-37 Score=316.17 Aligned_cols=259 Identities=28% Similarity=0.446 Sum_probs=209.1
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcC------CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTN------GRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETE 459 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 459 (700)
...++|++.+.||+|+||.||+|.+.. +..||+|.+.... ......+.+|+.+++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 345788999999999999999998652 3689999976543 344567899999999999999999999999999
Q ss_pred cceEEEeeCCCCCHHHHHhccCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEE
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTE-------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAK 532 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~k 532 (700)
..++||||+++++|.+++..... ...+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEE
Confidence 99999999999999999975422 124788999999999999999999999 99999999999999999999
Q ss_pred EeecCCCcccccCCc-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHH
Q 005355 533 VSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLE 610 (700)
Q Consensus 533 l~DfGl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 610 (700)
|+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||......+. ..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-------~~ 232 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV-------LK 232 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHH-------HH
Confidence 999999876543322 12223346788999999998899999999999999999998 9999875443321 11
Q ss_pred HHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 611 AMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 611 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
....+... ..+...+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus 233 ~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 233 FVIDGGHL---------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHhcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 11111111 1122235678899999999999999999999999863
No 151
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2e-36 Score=321.14 Aligned_cols=243 Identities=26% Similarity=0.378 Sum_probs=196.0
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||.||++... +++.||+|+++.. .....+.+.+|+.++.++ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999976 5789999988742 234456788999999888 699999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~ 153 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDTT 153 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCce
Confidence 99999987543 3999999999999999999999999 999999999999999999999999998743222 1223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||+.|+|||++.+..++.++||||||++||||++|..||......+...........+..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----------~~p 223 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI----------RIP 223 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC----------CCC
Confidence 3456899999999999999999999999999999999999999754433322222222222222111 112
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTM 655 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~ 655 (700)
...+..+.+++.+||+.||++||++
T Consensus 224 ~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 224 RFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 2234567889999999999999984
No 152
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.5e-36 Score=320.42 Aligned_cols=241 Identities=25% Similarity=0.358 Sum_probs=193.6
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhh-cCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQ-INHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
+.||+|+||.||+|+.. +++.||||.++.. .....+.+..|..++.. .+||||+++++.+...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999976 5789999987642 23334556677777765 4899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~ 153 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKA 153 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccc
Confidence 99999997653 3899999999999999999999999 9999999999999999999999999997543222 223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||+.|+|||++.+..++.++||||||+++|||++|+.||...+..+. ...+.... ...+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~-------~~~i~~~~----------~~~~ 216 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL-------FDSILNDR----------PHFP 216 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHcCC----------CCCC
Confidence 345689999999999999999999999999999999999999986543221 11111111 0112
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHH-HHHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTMK-EAAF 660 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~~-evl~ 660 (700)
......+.+|+.+||+.+|++||++. ++++
T Consensus 217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 217 RWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 22345678899999999999999875 4543
No 153
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.3e-36 Score=313.52 Aligned_cols=258 Identities=28% Similarity=0.434 Sum_probs=208.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcC----CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
.++|.+.+.||+|+||.||+|.+.+ ...|+||...... ....+.+.+|+.++++++|+||+++++++.+ +..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 4568888999999999999998653 2468999877644 4566789999999999999999999998865 55789
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
||||+++++|.+++..... .+++..++.++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|||+++...
T Consensus 84 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 158 (270)
T cd05056 84 VMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLE 158 (270)
T ss_pred EEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecc
Confidence 9999999999999976533 3899999999999999999999999 9999999999999999999999999987654
Q ss_pred cCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
...........++..|+|||.+....++.++||||||++++||++ |..||......+. ...+..+...
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-------~~~~~~~~~~---- 227 (270)
T cd05056 159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-------IGRIENGERL---- 227 (270)
T ss_pred cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-------HHHHHcCCcC----
Confidence 332222223334568999999988899999999999999999996 9999976543221 1111111110
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
..+...+..+.+++.+|+..+|.+|||+.++++.|+.++..
T Consensus 228 -----~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 -----PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11223456788999999999999999999999999987653
No 154
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-36 Score=309.12 Aligned_cols=250 Identities=26% Similarity=0.427 Sum_probs=206.7
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|.+.+.||+|++|.||++... +++.|++|.+.. ......+.+.+|++++++++|+|++++++.+.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999976 688999998764 2345567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 99999999998752 234899999999999999999999999 99999999999999999999999999876543322
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......+++.|+|||++.+..++.++||||||+++++|++|+.||......+ .......+.. .
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~---------~ 219 (256)
T cd08529 157 -FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-------LILKIIRGVF---------P 219 (256)
T ss_pred -hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCCC---------C
Confidence 2233457889999999999999999999999999999999999997554221 1111111111 1
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.........+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1122345678999999999999999999999864
No 155
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2e-36 Score=311.68 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=207.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-C---CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-N---GRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
..+|++.+.||+|+||.||+|.+. + +..+|+|.++... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 457888999999999999999864 2 3479999876532 3445788999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
||||+++++|.+++..... .+++.+++.++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 83 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 83 VTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999986543 3899999999999999999999999 9999999999999999999999999998664
Q ss_pred cCCceeee--eeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 544 IDQTHLTT--RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 544 ~~~~~~~~--~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
........ ...++..|+|||++.+..++.++||||||++++|+++ |..||......+ ....+..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-------~~~~~~~~~~--- 227 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-------VIKAIEEGYR--- 227 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-------HHHHHhCCCc---
Confidence 33322221 1223567999999999899999999999999999886 999997554322 1111221110
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.......+..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 228 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 228 ------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 011123455788999999999999999999999999875
No 156
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=308.68 Aligned_cols=270 Identities=27% Similarity=0.327 Sum_probs=203.9
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC-----cce
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETE-----VPL 462 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 462 (700)
.-.|...+++|.|.||.||+|+.. .++.||||+.....+. --+|+++|+.+.|||||+++-+|.... ...
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 345667789999999999999976 5789999987654332 247999999999999999999887443 234
Q ss_pred EEEeeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC-CcEEEeecCCCc
Q 005355 463 LVYEFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGASR 540 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~-~~~kl~DfGl~~ 540 (700)
||||||+. +|.++++... .+..++...+.-++.||++||+|||+.+ |+||||||.|+|+|.+ +.+||+|||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999965 8999998531 2234888889999999999999999999 9999999999999976 999999999999
Q ss_pred ccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH-----HHHHh
Q 005355 541 SVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL-----EAMKE 614 (700)
Q Consensus 541 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~-----~~~~~ 614 (700)
.+...+.. ...+-|..|+|||.+.+ ..|+.+.||||.||++.||+-|++-|.+.........+..++ +.+..
T Consensus 175 ~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 175 VLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 87655443 34456788999999877 579999999999999999999999999865443222221111 11111
Q ss_pred cch--hhhcchhhh-----hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH--HHHhchhh
Q 005355 615 NRL--FEVLDARVL-----KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF--ELGGIRAS 668 (700)
Q Consensus 615 ~~~--~~~~d~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~--~L~~l~~~ 668 (700)
... .+...+++. .-......++..+|+.++|+.+|.+|.++.|++. .++.++..
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 000 011111111 1123445678999999999999999999999986 45666654
No 157
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.3e-36 Score=310.82 Aligned_cols=253 Identities=29% Similarity=0.488 Sum_probs=204.9
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
..+|++.+.||+|+||.||++.+.+++.+|+|++..... ....+.+|++++++++|+|++++++++......++|+||+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 357888899999999999999987788999998764332 2367899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
++++|.+++..... .++++.++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++.........
T Consensus 82 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~ 156 (256)
T cd05112 82 EHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT 156 (256)
T ss_pred CCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence 99999999976533 3889999999999999999999999 999999999999999999999999998755332221
Q ss_pred eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......++..|+|||++.+..++.++||||||+++|||++ |..||......+ ....+..+. ....
T Consensus 157 ~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~--~~~~----- 222 (256)
T cd05112 157 SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE-------VVETINAGF--RLYK----- 222 (256)
T ss_pred ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH-------HHHHHhCCC--CCCC-----
Confidence 1222335678999999998899999999999999999998 999987544322 111111110 0011
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
+...+..+.+|+.+||+.+|++||++.|++++|.
T Consensus 223 --~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 223 --PRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1113457889999999999999999999999873
No 158
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.4e-36 Score=320.09 Aligned_cols=241 Identities=26% Similarity=0.369 Sum_probs=196.4
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 465 (700)
+|++.+.||+|+||.||+|... +++.||||++... .....+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5788999999999999999976 5789999987642 223345677788888877 5899999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999997653 3899999999999999999999999 999999999999999999999999998754322
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+. ...+.....
T Consensus 155 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~-------~~~i~~~~~-------- 218 (323)
T cd05616 155 G-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL-------FQSIMEHNV-------- 218 (323)
T ss_pred C-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH-------HHHHHhCCC--------
Confidence 2 123345689999999999999999999999999999999999999976543221 111111111
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTM 655 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~ 655 (700)
..+.....++.+|+.+||+.+|.+|++.
T Consensus 219 --~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 --AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred --CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1122345578899999999999999984
No 159
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.1e-36 Score=320.64 Aligned_cols=264 Identities=23% Similarity=0.347 Sum_probs=201.7
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
++|.+.+.||+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++|+||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 67899999999999999999976 67889999876533 22345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++ +|.+++..... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 86 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 974 88888876533 3789999999999999999999999 99999999999999999999999999875432221
Q ss_pred eeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc----
Q 005355 548 HLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD---- 622 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---- 622 (700)
......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||......+................+..+..
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 160 -TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred -ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 1223457899999999865 5688999999999999999999999987654432222111100000000000000
Q ss_pred --hhhhh-------ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 623 --ARVLK-------EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 623 --~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..... .........+.+|+.+||+.||.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000 011123456789999999999999999999987
No 160
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.1e-36 Score=309.32 Aligned_cols=250 Identities=26% Similarity=0.449 Sum_probs=203.2
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEE-eCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL-ETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~E~ 467 (700)
.++|++.+.||+|+||.||++... +..||+|..+... ..+.+.+|+.++++++|+|++++++++. +.+..++++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 457889999999999999999876 7889999876432 3467899999999999999999999765 45678999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++..... ..+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 999999999976532 24889999999999999999999999 9999999999999999999999999987543221
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.....+..|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+..+..
T Consensus 157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~--------- 217 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-------VVPRVEKGYK--------- 217 (256)
T ss_pred ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHhcCCC---------
Confidence 22334568999999999999999999999999999997 999986543222 1111211110
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.......+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 111223456788999999999999999999999999864
No 161
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.7e-36 Score=316.97 Aligned_cols=264 Identities=24% Similarity=0.378 Sum_probs=204.9
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcC---------------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTN---------------GRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLL 452 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~---------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~ 452 (700)
.++|++.+.||+|+||.||++.... ...||+|+++.. .....+.|.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4689999999999999999987532 235899988653 344556799999999999999999999
Q ss_pred eEEEeCCcceEEEeeCCCCCHHHHHhccCC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcE
Q 005355 453 GCCLETEVPLLVYEFIPNGTLYQYIHDQTE---------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANI 523 (700)
Q Consensus 453 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NI 523 (700)
+++...+..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+.+ ++|+||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhE
Confidence 999999999999999999999999965321 123788999999999999999999999 99999999999
Q ss_pred EECCCCcEEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh--CCCCCCCCCchh
Q 005355 524 LLDDKYRAKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT--GQKPIRSTDSEE 600 (700)
Q Consensus 524 Ll~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt--g~~p~~~~~~~~ 600 (700)
++++++.+||+|||++......... ......++..|+|||++.+..++.++||||||+++++|++ +..||......+
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~ 240 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ 240 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence 9999999999999999765332211 1222335678999999998899999999999999999998 667776544332
Q ss_pred hhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
.... ........ ........+...+..+.+|+.+||+.+|++||++.+|++.|++
T Consensus 241 ~~~~---~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 241 VIEN---TGEFFRNQ------GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHH---HHHhhhhc------cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1111 11111100 0000011122234679999999999999999999999999863
No 162
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.2e-37 Score=323.83 Aligned_cols=239 Identities=27% Similarity=0.351 Sum_probs=194.8
Q ss_pred cceEeeeCCeEEEEEEE----cCCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 395 NRILGQGGQGTVYKGML----TNGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
++.||+|+||.||+++. ..++.||+|++.... ......+.+|++++++++||||+++++.+.+.+..++||||+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 36799999999999875 257899999887532 223456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
++++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....... .
T Consensus 81 ~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~ 153 (318)
T cd05582 81 RGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-K 153 (318)
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-C
Confidence 9999999997543 3899999999999999999999999 9999999999999999999999999987543221 2
Q ss_pred eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
......|++.|+|||++.+..++.++||||||+++|||++|+.||......+. ...+..... .
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-------~~~i~~~~~----------~ 216 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET-------MTMILKAKL----------G 216 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH-------HHHHHcCCC----------C
Confidence 23345689999999999998999999999999999999999999976543221 111111111 1
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCCHHH
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPTMKE 657 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs~~e 657 (700)
.+......+.+|+.+||+.||++||++.+
T Consensus 217 ~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 12233456889999999999999999554
No 163
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=298.93 Aligned_cols=251 Identities=26% Similarity=0.385 Sum_probs=205.2
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
.+.|++-+.||+|.|+.|++.... .|+.+|+|++.. ......+++.+|++|-+.|+||||+++.+...+....+||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 467788889999999999998865 688888887543 33446788999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC---CCCcEEEeecCCCccc
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASRSV 542 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~---~~~~~kl~DfGl~~~~ 542 (700)
|+|.+++|..-|-.. ...++..+-..++||++||.|+|.++ |||||+||+|+|+- ...-+||+|||++..+
T Consensus 90 e~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred ecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 999999998766543 23788889999999999999999999 99999999999994 3456999999999877
Q ss_pred ccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 543 MIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 543 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
. .........||+.|||||++...+|+..+|||+.|||||-|+.|.+||.+.+... +.+.+..+...
T Consensus 164 ~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r-------lye~I~~g~yd---- 230 (355)
T KOG0033|consen 164 N--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-------LYEQIKAGAYD---- 230 (355)
T ss_pred C--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH-------HHHHHhccccC----
Confidence 5 3334445679999999999999999999999999999999999999998644322 23333333221
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.........++..+|+++||..||.+|.|+.|.|.
T Consensus 231 --~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 231 --YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred --CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 111122345567889999999999999999988764
No 164
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-36 Score=312.09 Aligned_cols=255 Identities=25% Similarity=0.367 Sum_probs=204.2
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
.++|++.+.||+|+||.||+|+.. +++.||+|+...........+.+|+.++++++|+||+++++.+...+..++|+||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 467999999999999999999974 6889999998765555566788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.++++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06646 88 CGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI- 160 (267)
T ss_pred CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc-
Confidence 99999999997543 3899999999999999999999999 9999999999999999999999999997653221
Q ss_pred eeeeeeecccccccccccc---cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 548 HLTTRVQGTFGYLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
.......++..|+|||.+. ...++.++||||||+++|||++|+.||......+.. . .+....+ ..+.
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~------~-~~~~~~~---~~~~ 230 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------F-LMSKSNF---QPPK 230 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh------e-eeecCCC---CCCC
Confidence 1122345888999999884 345788999999999999999999998644322110 0 0000000 0000
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
. ......+..+.+++.+||+.+|++||+++++++.|
T Consensus 231 ~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 L--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred C--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0 01123456788999999999999999999998753
No 165
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.2e-36 Score=309.59 Aligned_cols=252 Identities=33% Similarity=0.550 Sum_probs=202.2
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHH--HHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIE--QFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
|++.+.||+|+||+||+++.. +++.||+|++......... ...+|+.++++++|+||+++++++.+....++|||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567899999999999999987 5678999998876554433 3456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
++++|.+++.... .+++..++.++.||++||++||+.+ ++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~-~~~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKL-SENNE 153 (260)
T ss_dssp TTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEES-TSTTS
T ss_pred ccccccccccccc---ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc-ccccc
Confidence 9999999998332 3899999999999999999999999 999999999999999999999999998754 22233
Q ss_pred eeeeeecccccccccccc-cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 549 LTTRVQGTFGYLDPEYFR-SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......++..|+|||++. +..++.++||||||+++++|++|..||............... .. ... ......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~---~~-~~~----~~~~~~ 225 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKI---LK-RPL----PSSSQQ 225 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHH---HH-THH----HHHTTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhc---cc-ccc----cccccc
Confidence 344556899999999998 889999999999999999999999999866322221111111 10 000 000000
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.......+.+++.+||+.+|++||++.++++
T Consensus 226 --~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 226 --SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp --HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred --cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0011267899999999999999999999985
No 166
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.1e-37 Score=331.65 Aligned_cols=252 Identities=23% Similarity=0.297 Sum_probs=199.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++++.||+|+||.||+++.. +++.||||++.... ......+.+|++++++++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36899999999999999999975 58899999876422 234567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 81 DYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 9999999999997653 3889999999999999999999999 999999999999999999999999997532100
Q ss_pred C------------------------------------------ceeeeeeecccccccccccccCCCCcccceehHHHHH
Q 005355 546 Q------------------------------------------THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVL 583 (700)
Q Consensus 546 ~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il 583 (700)
. ........||+.|+|||++.+..++.++|||||||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0 0001134689999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCC---CHHHHHH
Q 005355 584 VELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRP---TMKEAAF 660 (700)
Q Consensus 584 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP---s~~evl~ 660 (700)
|||++|+.||......+... .+..... . ............+.+++.+|+ .+|.+|+ ++.|+++
T Consensus 235 yell~G~~Pf~~~~~~~~~~-------~i~~~~~--~----~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 235 YEMLVGQPPFLADTPAETQL-------KVINWET--T----LHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred eehhhCCCCCCCCCHHHHHH-------HHhccCc--c----ccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 99999999998665432110 1111000 0 000011123456777888876 5999999 8899887
Q ss_pred H
Q 005355 661 E 661 (700)
Q Consensus 661 ~ 661 (700)
.
T Consensus 301 h 301 (376)
T cd05598 301 H 301 (376)
T ss_pred C
Confidence 4
No 167
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-36 Score=315.82 Aligned_cols=250 Identities=27% Similarity=0.416 Sum_probs=206.4
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..+|++.+.||+|+||.||+|... +++.|++|.+........+.+.+|+.+++.++|+||+++++.+......++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 467888999999999999999965 6889999988766555667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++... .+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred cCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 9999999999653 2889999999999999999999999 99999999999999999999999999875432221
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......+++.|+|||.+.+..++.++||||||+++|+|++|+.||........ .......... . .
T Consensus 172 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~------~~~~~~~~~~-~-------~ 236 (296)
T cd06654 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNGTP-E-------L 236 (296)
T ss_pred -ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh------HHHHhcCCCC-C-------C
Confidence 12234588899999999988899999999999999999999999975543221 1111111100 0 0
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+......+.+++.+||..+|++||+++|+++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 112334567889999999999999999999997
No 168
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-36 Score=306.76 Aligned_cols=269 Identities=25% Similarity=0.300 Sum_probs=218.9
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcC-CcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
.+.|++++.||+|.-|+||++.+++ +..+|+|++... ......+...|-+||+.+.||.++.|++.+..++..+|+
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 4567778999999999999999874 589999998753 344456778899999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|||++||+|..+++++..+ .+++..+..++.+++-||+|||-.| ||+|||||+||||.++|++-|+||.|+.....
T Consensus 156 meyCpGGdL~~LrqkQp~~-~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGK-RFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EecCCCccHHHHHhhCCCC-ccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 9999999999999987654 4999999999999999999999999 99999999999999999999999998764311
Q ss_pred ---------------------------------CCc----------------------eeeeeeecccccccccccccCC
Q 005355 545 ---------------------------------DQT----------------------HLTTRVQGTFGYLDPEYFRSSQ 569 (700)
Q Consensus 545 ---------------------------------~~~----------------------~~~~~~~gt~~y~aPE~~~~~~ 569 (700)
... ......+||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 000 0112246899999999999999
Q ss_pred CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCC
Q 005355 570 FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIG 649 (700)
Q Consensus 570 ~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p 649 (700)
.+.++|+|+||++||||+.|..||.+.+..+- +..++.+.+.-......+..+.+||+++|..||
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T---------------l~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP 376 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET---------------LRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDP 376 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhh---------------HHHHhcCCCcCCCCCcchhHHHHHHHHHhccCh
Confidence 99999999999999999999999998876542 233333333222233667789999999999999
Q ss_pred CCCCC----HHHHHH--HHHhchhhcCCCccCC
Q 005355 650 KKRPT----MKEAAF--ELGGIRASIGDSIMQH 676 (700)
Q Consensus 650 ~~RPs----~~evl~--~L~~l~~~~~~~~~~~ 676 (700)
.+|.- +.||-+ .+++++=.+..+..+.
T Consensus 377 ~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP 409 (459)
T KOG0610|consen 377 SKRLGSKRGAAEIKRHPFFEGVNWALIRCARPP 409 (459)
T ss_pred hhhhccccchHHhhcCccccCCChhheeccCCC
Confidence 99998 777765 4555554444444443
No 169
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.4e-36 Score=311.32 Aligned_cols=255 Identities=25% Similarity=0.427 Sum_probs=204.7
Q ss_pred cCCCccceEeeeCCeEEEEEEEcC-C---cEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLTN-G---RIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
..|++.+.||+|+||.||+|.+.. + ..||||.++.. .....+.|..|+.++++++||||+++++++.+....++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 457888999999999999999753 3 36999998754 445567899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|||+++++|.+++..... .+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++.....
T Consensus 84 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 84 TEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence 999999999999976533 3899999999999999999999999 99999999999999999999999999875533
Q ss_pred CCceee--eeee--cccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 545 DQTHLT--TRVQ--GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 545 ~~~~~~--~~~~--gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
...... .... .+..|+|||++....++.++||||||+++|||++ |..||......+ ....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~-------~~~~i~~~~~-- 229 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------VINAIEQDYR-- 229 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH-------HHHHHHcCCc--
Confidence 221111 1111 2457999999999999999999999999999886 999997544322 1111111100
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
...+.+.+..+.+++.+||+.+|.+||++++++..|+++
T Consensus 230 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 230 -------LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 011123345688999999999999999999999999865
No 170
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.5e-36 Score=312.98 Aligned_cols=259 Identities=26% Similarity=0.468 Sum_probs=206.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCc----EEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGR----IVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
.++|++.++||+|+||+||+|++. +++ .||+|.++.. .....+.+.+|+.+++.++|+||+++++.+... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 467888999999999999999864 344 4899987653 344467789999999999999999999998754 568
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+++||+++|+|.++++.... .+++..++.++.|++.||+|||+++ ++||||||+|||+++++.+||+|||+++..
T Consensus 85 l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred EEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeec
Confidence 99999999999999976533 3899999999999999999999999 999999999999999999999999999866
Q ss_pred ccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 543 MIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 543 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
....... .....++..|+|||.+.+..++.++||||||+++|||++ |..||........ ...+..+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-------~~~~~~~~~~-- 230 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-------PDLLEKGERL-- 230 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-------HHHHHCCCcC--
Confidence 4332221 112234678999999999999999999999999999998 8999865433221 1111111111
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhc
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~ 669 (700)
..+...+..+.+++.+||+.||++||++.++++.|+.+....
T Consensus 231 -------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 231 -------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred -------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 111234457889999999999999999999999998875443
No 171
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.1e-36 Score=319.71 Aligned_cols=241 Identities=24% Similarity=0.368 Sum_probs=197.2
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
+.||+|+||+||++.+. +++.||||+++.. .....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999976 5789999987742 233456678899999887 799999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTT 153 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Ccc
Confidence 99999987653 3899999999999999999999999 9999999999999999999999999987532222 222
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....|++.|+|||++.+..++.++||||||+++|+|++|+.||......+ ....+..... ..+
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~-------~~~~i~~~~~----------~~~ 216 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE-------LFQSILEDEV----------RYP 216 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH-------HHHHHHcCCC----------CCC
Confidence 33568999999999999999999999999999999999999997554322 1111111111 112
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCH-----HHHHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTM-----KEAAF 660 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~-----~evl~ 660 (700)
...+..+.+|+.+||+.||++||++ .++++
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 217 RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 2334578899999999999999999 77765
No 172
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.5e-36 Score=310.39 Aligned_cols=250 Identities=26% Similarity=0.439 Sum_probs=198.2
Q ss_pred ceEeeeCCeEEEEEEEcC-Cc--EEEEEEccc-cChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLTN-GR--IVAIKKSKL-VDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~-~~--~vavK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||.||+|.+.+ +. .+++|..+. ......+.+.+|++++.++ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999753 43 568888774 3345567899999999999 799999999999999999999999999
Q ss_pred CCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 471 GTLYQYIHDQTE-------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 471 gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
++|.+++..... ...+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 999999975421 124789999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcc
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENR 616 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 616 (700)
++...... ........+..|+|||++....++.++||||||++++||++ |..||......+ ....+..+.
T Consensus 158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~-------~~~~~~~~~ 228 (270)
T cd05047 158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE-------LYEKLPQGY 228 (270)
T ss_pred Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH-------HHHHHhCCC
Confidence 98632211 11111223567999999998899999999999999999997 999996543221 111111111
Q ss_pred hhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 617 LFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 617 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
. .+.+......+.+|+.+||+.+|.+|||+.++++.|+++.
T Consensus 229 ~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 R---------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred C---------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 0111223456889999999999999999999999998764
No 173
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3e-36 Score=307.94 Aligned_cols=250 Identities=23% Similarity=0.331 Sum_probs=205.2
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
+|++.++||+|+||.||++... +++.+|+|.++. ......+.+.+|+.++++++|+||+++++.+.+.+..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788899999999999999976 688999998764 23445678889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
++++|.+++..... ..+++..++.++.|++.||.|||+++ |+|+||||+||++++++.++|+|||++...... ..
T Consensus 81 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~-~~ 155 (255)
T cd08219 81 DGGDLMQKIKLQRG-KLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP-GA 155 (255)
T ss_pred CCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccc-cc
Confidence 99999999875432 34789999999999999999999999 999999999999999999999999998755322 22
Q ss_pred eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
......+++.|+|||++.+..++.++|+||||+++|+|++|..||....... .......+... .
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~---------~ 219 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN-------LILKVCQGSYK---------P 219 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH-------HHHHHhcCCCC---------C
Confidence 2234558889999999999999999999999999999999999997543221 11111122111 1
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.+...+..+.+|+.+||+.+|++||++.|++..
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 122344568899999999999999999999864
No 174
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.9e-36 Score=307.60 Aligned_cols=248 Identities=28% Similarity=0.447 Sum_probs=199.7
Q ss_pred ceEeeeCCeEEEEEEEcC----CcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLTN----GRIVAIKKSKLVDE-SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||.||+|++.. +..+|+|.+..... ...+.+.+|+.+++++.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 479999999999998642 26899998775443 34578999999999999999999999875 4567999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..++.++.|++.||+|||..+ ++|+||||+|||++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 99999998654 4899999999999999999999999 99999999999999999999999999986643332211
Q ss_pred e--eeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 551 T--RVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 551 ~--~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
. ...++..|+|||.+.+..++.++||||||+++|+|++ |..||......+ +...+..... .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~-------~~~~~~~~~~---------~ 217 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE-------VIAMLESGER---------L 217 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH-------HHHHHHcCCc---------C
Confidence 1 1223467999999999999999999999999999998 999997554322 1112222111 0
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
..+...+..+.+++.+||..+|++||++.++++.|+++.
T Consensus 218 ~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 112234457889999999999999999999999998764
No 175
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.7e-36 Score=320.63 Aligned_cols=255 Identities=21% Similarity=0.339 Sum_probs=200.5
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||.||+++.. +++.||+|++.. ......+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47899999999999999999976 588999998764 22334566889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.+... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 99999999999976432 3899999999999999999999999 999999999999999999999999998765433
Q ss_pred Cceeeeeeeccccccccccccc-----CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRS-----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
.........||+.|+|||++.. ..++.++||||||+++|||++|+.||......+. +...........+
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~------~~~i~~~~~~~~~ 229 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHKEHFQF 229 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH------HHHHHcCCCcccC
Confidence 3323333568999999999863 4578899999999999999999999975443221 1111111110000
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKK--RPTMKEAAFE 661 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPs~~evl~~ 661 (700)
.......+..+.+++++||...+++ ||+++++++.
T Consensus 230 ------~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 230 ------PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ------CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 0111124557788999988654443 7899999885
No 176
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.5e-36 Score=313.18 Aligned_cols=246 Identities=22% Similarity=0.292 Sum_probs=196.2
Q ss_pred EeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 398 LGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
||+|+||+||++.+. +++.||+|++.... ....+.+..|++++++++|+||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999976 68899999876422 22345678899999999999999999999999999999999999999
Q ss_pred HHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeee
Q 005355 474 YQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552 (700)
Q Consensus 474 ~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~ 552 (700)
.+++.... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 99886432 2345899999999999999999999999 99999999999999999999999999876533222 2233
Q ss_pred eecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHH
Q 005355 553 VQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEE 632 (700)
Q Consensus 553 ~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 632 (700)
..|++.|+|||++.+..++.++||||||+++|||++|+.||.......... ...... .... ...+..
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~---~~~~~~--------~~~~--~~~~~~ 223 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK---ELKQRI--------LNDS--VTYPDK 223 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHH---HHHHhh--------cccC--CCCccc
Confidence 468999999999999999999999999999999999999997544321110 000000 0000 011233
Q ss_pred HHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 633 EIITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 633 ~~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
.+..+.+++.+||+.+|++|| +++++++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 556788999999999999999 6666665
No 177
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.6e-36 Score=317.43 Aligned_cols=241 Identities=27% Similarity=0.355 Sum_probs=194.1
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhh-cCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQ-INHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
+.||+|+||.||+|.+. +++.||||+++.. .....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999976 5789999987653 12334566778888876 4899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (316)
T cd05619 81 GDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKT 153 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cce
Confidence 99999997643 3899999999999999999999999 9999999999999999999999999987532222 123
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||..|+|||++.+..++.++||||||+++|||++|..||......+. ...+..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-------~~~i~~~~~----------~~~ 216 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL-------FQSIRMDNP----------CYP 216 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhCCC----------CCC
Confidence 345689999999999999999999999999999999999999976543221 111111110 011
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHH-HHHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTMK-EAAF 660 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~~-evl~ 660 (700)
......+.+|+.+||+.+|++||++. ++++
T Consensus 217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 217 RWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 22345678899999999999999997 5543
No 178
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.5e-36 Score=318.78 Aligned_cols=240 Identities=25% Similarity=0.366 Sum_probs=193.7
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||.||++++. +++.||+|.++.. .....+.+..|..++..+ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999976 6889999987642 123445677788888764 899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRA 153 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC-Cce
Confidence 99999987643 3899999999999999999999999 9999999999999999999999999987432221 223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||+.|+|||++.+..++.++||||||+++|||++|..||......+ ....+.... + ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~-------~~~~~~~~~------~----~~~ 216 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE-------LFESIRVDT------P----HYP 216 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCC------C----CCC
Confidence 34568999999999999999999999999999999999999997654322 111111111 0 111
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHH-HHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTMK-EAA 659 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~~-evl 659 (700)
......+.+|+.+||+.||++||++. +++
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 217 RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 22345678899999999999999985 555
No 179
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.3e-36 Score=305.34 Aligned_cols=247 Identities=27% Similarity=0.458 Sum_probs=201.2
Q ss_pred ceEeeeCCeEEEEEEEcCCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHH
Q 005355 396 RILGQGGQGTVYKGMLTNGRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLY 474 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 474 (700)
++||+|+||.||++.+.+++.|++|+....... ..+.+.+|++++++++|+||+++++++.+....++|+||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 479999999999999877999999987764433 5678999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee-eee
Q 005355 475 QYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT-TRV 553 (700)
Q Consensus 475 ~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~-~~~ 553 (700)
+++..... .+++..++.++.+++.||+|||+++ ++||||||+|||++.++.+||+|||++........... ...
T Consensus 81 ~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 81 TFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 99976433 3889999999999999999999999 99999999999999999999999999875532211111 112
Q ss_pred ecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHH
Q 005355 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEE 632 (700)
Q Consensus 554 ~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 632 (700)
..+..|+|||.+.+..++.++||||||++++||++ |..||........ ...+.... ....+..
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~-------~~~~~~~~---------~~~~~~~ 219 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT-------RERIESGY---------RMPAPQL 219 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH-------HHHHhcCC---------CCCCCcc
Confidence 24567999999998899999999999999999999 8888865543221 11111110 0011223
Q ss_pred HHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 633 EIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 633 ~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
.+..+.+++.+||+.+|++||++.|+++.|+
T Consensus 220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 4557899999999999999999999999886
No 180
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.1e-36 Score=315.14 Aligned_cols=258 Identities=25% Similarity=0.450 Sum_probs=207.3
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEV 460 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 460 (700)
..++|++.+.||+|+||.||++.+. ++..||+|++.... ......+.+|+.++++++|+||+++++++.+.+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 4578999999999999999999864 36789999887543 3445679999999999999999999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhccCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTE-------------------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~-------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~ 521 (700)
.++++||+++++|.+++..... ...+++..++.++.|++.||+|||+++ ++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHh
Confidence 9999999999999999975321 124788999999999999999999999 999999999
Q ss_pred cEEECCCCcEEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCch
Q 005355 522 NILLDDKYRAKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSE 599 (700)
Q Consensus 522 NILl~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~ 599 (700)
||+++.++.+||+|||++......... .......+..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999998754322211 1122234667999999998999999999999999999997 88888654432
Q ss_pred hhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 600 EDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
+ ....+..+... ..+...+..+.+|+.+||+.+|++|||+.|+++.|++
T Consensus 240 ~-------~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 E-------VIYYVRDGNVL---------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred H-------HHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 2 11222222211 1112345678999999999999999999999999974
No 181
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.7e-36 Score=313.62 Aligned_cols=265 Identities=25% Similarity=0.407 Sum_probs=207.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEcC-----------------CcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCcee
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLTN-----------------GRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVV 449 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-----------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv 449 (700)
..++|++.+.||+|+||.||++.+.. +..||+|.+... .....+.+.+|++++++++|+||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence 35688999999999999999988642 245899987753 334567899999999999999999
Q ss_pred eEEeEEEeCCcceEEEeeCCCCCHHHHHhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 005355 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTE--------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521 (700)
Q Consensus 450 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~ 521 (700)
++++++...+..++++|++++++|.+++..... ...+++..++.++.|++.||+|||+.+ ++|+||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~ 159 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATR 159 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchh
Confidence 999999999999999999999999999976541 124899999999999999999999999 999999999
Q ss_pred cEEECCCCcEEEeecCCCcccccCCc-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh--CCCCCCCCCc
Q 005355 522 NILLDDKYRAKVSDFGASRSVMIDQT-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT--GQKPIRSTDS 598 (700)
Q Consensus 522 NILl~~~~~~kl~DfGl~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt--g~~p~~~~~~ 598 (700)
||+++.++.++|+|||+++....... .......++..|+|||++....++.++||||||+++|||++ +..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 99999999999999999876533221 12233446778999999998899999999999999999998 6777764432
Q ss_pred hhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
.+ ............. .......+...+.++.+|+.+||+.+|++|||+.||++.|++
T Consensus 240 ~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 240 QQ---VIENAGHFFRDDG------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred HH---HHHHHHhcccccc------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 22 1111111111100 011111122334678999999999999999999999998863
No 182
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.1e-36 Score=320.53 Aligned_cols=237 Identities=26% Similarity=0.384 Sum_probs=190.7
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHH-HHhhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVA-ILSQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||+||+|... +++.||||++.... ......+..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 47999999999999976 68999999876421 223344555555 45779999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~ 153 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTT 153 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCcc
Confidence 99999997643 3899999999999999999999999 999999999999999999999999998753222 2223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||+.|+|||++.+..++.++||||||+++|||++|..||...+..+. ...+..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-------~~~i~~~~~----------~~~ 216 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM-------YDNILNKPL----------RLK 216 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH-------HHHHHcCCC----------CCC
Confidence 345689999999999999999999999999999999999999976543221 111111111 111
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTMK 656 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~~ 656 (700)
...+..+.+++.+||+.+|.+||+++
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 217 PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 22356788999999999999999985
No 183
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=6e-36 Score=310.20 Aligned_cols=251 Identities=26% Similarity=0.403 Sum_probs=200.4
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
++|++.++||+|+||.||+|.+. +++.||+|..... .....+.+.+|++++++++||||+++++.+...+..++|+||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 36788899999999999999964 6889999987643 334456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|..+. .+++..+..++.|++.||+|||+.+ |+|+||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-- 148 (279)
T cd06619 81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-- 148 (279)
T ss_pred CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence 9999997653 2788899999999999999999999 999999999999999999999999999755322
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......++..|+|||++.+..++.++||||||+++|+|++|+.||......+...........+..... + .
T Consensus 149 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~---~ 219 (279)
T cd06619 149 -IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP-----P---V 219 (279)
T ss_pred -cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC-----C---C
Confidence 223346889999999999999999999999999999999999999754322211111111111111100 0 0
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
........++.+++.+||+.+|++||+++|+++.
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0112234578899999999999999999999874
No 184
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.8e-36 Score=311.32 Aligned_cols=251 Identities=29% Similarity=0.352 Sum_probs=201.5
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.|+..+.||+|+||.||++.+. +++.||||.+.... ....+.+.+|+.++++++|+|++++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677889999999999999976 68899999876422 2234567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++..... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999999865432 24899999999999999999999999 9999999999999999999999999987543222
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
. .....|+..|+|||++.+..++.++||||||+++|+|++|+.||..............+... ..
T Consensus 157 ~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-------------~~ 221 (285)
T cd05630 157 T--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-------------VQ 221 (285)
T ss_pred c--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-------------hh
Confidence 1 22346899999999999999999999999999999999999999764322111111111000 00
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPT-----MKEAAF 660 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs-----~~evl~ 660 (700)
...+......+.+|+.+||+.||++||| ++|+++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 1112234456889999999999999999 888887
No 185
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.7e-36 Score=313.80 Aligned_cols=265 Identities=24% Similarity=0.382 Sum_probs=205.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-----------------CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCcee
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-----------------NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVV 449 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-----------------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv 449 (700)
+.++|++.++||+|+||.||++.+. +...||+|++... .....+.+.+|+++++.++|+||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 3467999999999999999998643 2346899988753 344567899999999999999999
Q ss_pred eEEeEEEeCCcceEEEeeCCCCCHHHHHhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 005355 450 KLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTE--------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSA 521 (700)
Q Consensus 450 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~ 521 (700)
++++++...+..+++|||+++++|.+++..... ...+++..++.++.|++.||+|||+.+ ++|+||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~ 159 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATR 159 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChh
Confidence 999999999999999999999999999976431 124788899999999999999999999 999999999
Q ss_pred cEEECCCCcEEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh--CCCCCCCCCc
Q 005355 522 NILLDDKYRAKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT--GQKPIRSTDS 598 (700)
Q Consensus 522 NILl~~~~~~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt--g~~p~~~~~~ 598 (700)
|||++.++.++|+|||++......... ......++..|+|||+.....++.++||||||+++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 999999999999999999765332211 1122334678999999888889999999999999999998 7788865443
Q ss_pred hhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 599 EEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
.+.. ............ ......+...+..+.+|+.+||+.+|++||++.||++.|++
T Consensus 240 ~~~~---~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQVI---ENTGEFFRDQGR------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHH---HHHHHHHhhccc------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 2211 111111110000 00001122344678899999999999999999999999863
No 186
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.5e-36 Score=313.86 Aligned_cols=262 Identities=27% Similarity=0.411 Sum_probs=204.6
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-----CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--Ccc
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVP 461 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 461 (700)
..|++.+.||+|+||.||++++. +++.||+|.++... ....+.+.+|++++++++|+|++++++++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 45788999999999999999842 47889999987543 44457899999999999999999999998875 567
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++||||+++++|.+++..... .+++..++.++.|++.||+|||+++ ++||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 899999999999999976432 3899999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCce--eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchh--------hhhHHHHHHHH
Q 005355 542 VMIDQTH--LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE--------DKSLVGYFLEA 611 (700)
Q Consensus 542 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~--------~~~~~~~~~~~ 611 (700)
....... ......++..|+|||++.+..++.++||||||+++|||+++..|........ ...........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV 238 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 5433221 1223446778999999998899999999999999999999876643211100 00001111111
Q ss_pred HHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 612 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
...+.. ...+...+..+.+|+.+||+.+|++||+++++++.|+.+
T Consensus 239 ~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 LEEGKR---------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHcCcc---------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 111111 111223456799999999999999999999999999875
No 187
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.5e-36 Score=322.52 Aligned_cols=263 Identities=28% Similarity=0.432 Sum_probs=205.7
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEE------cCCcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeC
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGML------TNGRIVAIKKSKLVD-ESNIEQFINEVAILSQI-NHRNVVKLLGCCLET 458 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 458 (700)
...++|++.+.||+|+||.||+|.+ ..++.||||+++... ......+.+|+.++.++ +|+||+++++++...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 3467899999999999999999974 246789999987532 33456788999999999 689999999988654
Q ss_pred -CcceEEEeeCCCCCHHHHHhccCC-------------------------------------------------------
Q 005355 459 -EVPLLVYEFIPNGTLYQYIHDQTE------------------------------------------------------- 482 (700)
Q Consensus 459 -~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------------------- 482 (700)
...+++|||+++|+|.++++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 456899999999999999975321
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce-eeee
Q 005355 483 ---------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH-LTTR 552 (700)
Q Consensus 483 ---------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~-~~~~ 552 (700)
...+++..+..++.||++||+|||+++ |+||||||+|||+++++.+||+|||++......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 123688889999999999999999999 999999999999999999999999998765322211 1122
Q ss_pred eecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCH
Q 005355 553 VQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKE 631 (700)
Q Consensus 553 ~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 631 (700)
..++..|+|||++.+..++.++||||||+++|+|++ |..||......+. +......+.... .+.
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~------~~~~~~~~~~~~---------~~~ 305 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEGTRMR---------APD 305 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH------HHHHHhccCCCC---------CCC
Confidence 335678999999999999999999999999999997 9999875433221 111122211110 111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 632 EEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 632 ~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
.....+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus 306 ~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 306 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 123468899999999999999999999999998754
No 188
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2e-36 Score=317.35 Aligned_cols=271 Identities=24% Similarity=0.357 Sum_probs=205.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.++|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++|+||+++++++...+..++|+|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence 357889999999999999999976 57899999876432 3334567899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|++ ++|.+++..... .+++..+..++.||++||+|||+.+ |+|+||||+|||++.++.+||+|||++.......
T Consensus 85 ~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 85 YLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred ccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 996 689998876533 3889999999999999999999999 9999999999999999999999999987543222
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch--
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA-- 623 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-- 623 (700)
. ......+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+................+..++..
T Consensus 159 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 159 K-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred C-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 1 1223346889999999865 45788999999999999999999999866543321111111000000111111100
Q ss_pred -------hh----hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH--HHHhch
Q 005355 624 -------RV----LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF--ELGGIR 666 (700)
Q Consensus 624 -------~~----~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~--~L~~l~ 666 (700)
.. ...........+.+|+.+||+.||.+|||++|+++ .++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 00 00011123456889999999999999999999987 444444
No 189
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.4e-36 Score=310.87 Aligned_cols=248 Identities=23% Similarity=0.305 Sum_probs=196.3
Q ss_pred EeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 398 LGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
||+|+||.||++..+ +++.||+|.+.... ......+..|++++++++||||+++++.+......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999975 68999999876321 22234566799999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeee
Q 005355 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553 (700)
Q Consensus 474 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~ 553 (700)
.+++..... ..+++..+..++.||+.||+|||+.+ ++||||||+|||++.++.+||+|||++...... ......
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~ 154 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQR 154 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeecc
Confidence 999865432 34899999999999999999999999 999999999999999999999999998765322 222334
Q ss_pred ecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHH
Q 005355 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEE 633 (700)
Q Consensus 554 ~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 633 (700)
.++..|+|||++.+..++.++||||||+++|||++|+.||.......... . ......... +. ......
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~--~-~~~~~~~~~--------~~-~~~~~~ 222 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKE--E-LKRRTLEDE--------VK-FEHQNF 222 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHH--H-HHHHhhccc--------cc-cccccC
Confidence 68999999999999899999999999999999999999997543321110 0 111111111 00 001124
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 634 IITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 634 ~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
+.++.+|+.+||+.||++||+++|+++.+.
T Consensus 223 ~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 223 TEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred CHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 556889999999999999999988775553
No 190
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.7e-36 Score=310.19 Aligned_cols=257 Identities=26% Similarity=0.426 Sum_probs=208.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc------CCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcc
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT------NGRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 461 (700)
.++|++.+.||+|+||.||+|+.+ +.+.|++|.+...... ..+.+.+|++++++++|+||+++++++.+.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH 83 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence 367889999999999999999964 2467999987764443 567899999999999999999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEee
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEE------FPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~D 535 (700)
++||||+++++|.+++...... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEcc
Confidence 9999999999999999865422 14899999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHh
Q 005355 536 FGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKE 614 (700)
Q Consensus 536 fGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 614 (700)
||++...............++..|+|||.+.+..++.++||||||+++++|++ |..||....... .......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-------~~~~~~~ 233 (275)
T cd05046 161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-------VLNRLQA 233 (275)
T ss_pred cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-------HHHHHHc
Confidence 99987543333223333456778999999988889999999999999999999 888886443221 1112222
Q ss_pred cchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 615 NRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 615 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
+.+.. ......+..+.+++.+||+.+|++||++.|++++|.
T Consensus 234 ~~~~~--------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 GKLEL--------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCcCC--------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 22111 111233457889999999999999999999999885
No 191
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.9e-36 Score=333.22 Aligned_cols=261 Identities=23% Similarity=0.333 Sum_probs=195.3
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC-------
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLET------- 458 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------- 458 (700)
....+|++.++||+|+||.||+|... .++.||||++.... ....+|+.+++.++|+||+++++++...
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 34578999999999999999999975 68899999875422 2345799999999999999999886432
Q ss_pred -CcceEEEeeCCCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC-cEEEee
Q 005355 459 -EVPLLVYEFIPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-RAKVSD 535 (700)
Q Consensus 459 -~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~-~~kl~D 535 (700)
...++||||++ ++|.+++... .....+++..+..++.||+.||+|||+.+ |+||||||+||||+.++ .+||+|
T Consensus 139 ~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 139 NIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred ceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeec
Confidence 23568999997 4787777542 22345899999999999999999999999 99999999999998664 799999
Q ss_pred cCCCcccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh
Q 005355 536 FGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE 614 (700)
Q Consensus 536 fGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 614 (700)
||+++....... .....+|+.|+|||++.+ ..++.++||||||++||||++|.+||.+....+.... ..+....
T Consensus 215 FGla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~---i~~~~~~ 289 (440)
T PTZ00036 215 FGSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVR---IIQVLGT 289 (440)
T ss_pred cccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHHHhCC
Confidence 999986543222 223457999999999876 4689999999999999999999999986554322111 1111000
Q ss_pred c---------------chhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 615 N---------------RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 615 ~---------------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
. .+..+....+....+...+.++.+|+.+||+.+|.+|||+.|+++
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 0 000001111111122234567899999999999999999999985
No 192
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=7.3e-36 Score=307.56 Aligned_cols=259 Identities=26% Similarity=0.379 Sum_probs=206.0
Q ss_pred HHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 384 ELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 384 e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
|++.+++++.....||+|+||.||+|++. ++..|++|.+........+.+.+|+.++++++|+||+++++++...+..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34566777777889999999999999965 57789999888766667788999999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC-CCcEEEeecCCCcc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGASRS 541 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~-~~~~kl~DfGl~~~ 541 (700)
+|+||+++++|.+++.........++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||++..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 99999999999999986533212388889999999999999999999 999999999999976 67999999999875
Q ss_pred cccCCceeeeeeecccccccccccccCC--CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 542 VMIDQTHLTTRVQGTFGYLDPEYFRSSQ--FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 542 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
...... ......+++.|+|||++.... ++.++||||||+++|+|++|..||......... . ......
T Consensus 159 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~---~-~~~~~~------ 227 (268)
T cd06624 159 LAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA---M-FKVGMF------ 227 (268)
T ss_pred cccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh---H-hhhhhh------
Confidence 432221 122334788999999986643 788999999999999999999999654322110 0 000000
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
......+.....++.+++.+||+.+|.+|||+.|+++
T Consensus 228 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 228 ----KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ----ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 0011122334567889999999999999999999986
No 193
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.8e-36 Score=306.32 Aligned_cols=249 Identities=33% Similarity=0.502 Sum_probs=205.5
Q ss_pred ceEeeeCCeEEEEEEEcC----CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLTN----GRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
+.||+|+||.||++.... +..|++|.+...... ..+.+.+|+++++.++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 479999999999999764 788999998765443 368899999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 471 GTLYQYIHDQTE------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 471 gsL~~~l~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
++|.+++..... ...+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999987521 245999999999999999999999999 99999999999999999999999999987654
Q ss_pred CCc-eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 545 DQT-HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 545 ~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
... .......++..|+|||.+....++.++||||||+++++|++ |..||......+ +......+..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~----- 225 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE-------VLEYLRKGYR----- 225 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCC-----
Confidence 321 12233457889999999998899999999999999999999 699997663322 1112221110
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
...+...+..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 226 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 226 ----LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1122334567899999999999999999999999874
No 194
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.9e-36 Score=316.27 Aligned_cols=263 Identities=29% Similarity=0.422 Sum_probs=203.6
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
++|++.+.||+|+||.||++.+. ++..+|+|.+... ......++.+|++++++++||||+++++.+.+.+..++|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46899999999999999999976 5788999987653 334456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
+++++|.+++.... .+++..+..++.|+++||.|||+ .+ ++|+||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 153 (308)
T cd06615 81 MDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 153 (308)
T ss_pred cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc-
Confidence 99999999997653 38999999999999999999997 47 999999999999999999999999998754322
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh------------
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE------------ 614 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------ 614 (700)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.................
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence 123346889999999998888999999999999999999999999654422211111000000000
Q ss_pred -----cchhhhcchhhh----hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 615 -----NRLFEVLDARVL----KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 615 -----~~~~~~~d~~~~----~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
....+..+.... ..........+.+|+.+||+.+|++||+++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000000 00001234568999999999999999999999885
No 195
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=310.66 Aligned_cols=248 Identities=23% Similarity=0.367 Sum_probs=213.5
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
..-|.+.+.||+|.|..|-+|++- .|++||||++.. .+......+++|++-|+.++|||||+|+++.......|||+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 456788889999999999999854 799999999875 33445678999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC-CCCcEEEeecCCCccccc
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~-~~~~~kl~DfGl~~~~~~ 544 (700)
|+=++|+|+|||-++... +.++...+++.||+.|+.|+|+.. +|||||||+||.+- .-|-|||+|||++..+.+
T Consensus 97 ELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 999999999999887665 999999999999999999999999 99999999999885 568899999999986643
Q ss_pred CCceeeeeeecccccccccccccCCCC-cccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
. ...++.+|.+.|.|||++.+..|. +++||||||||||.|++|++||+..+..| .+..++|-
T Consensus 172 G--~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE---------------TLTmImDC 234 (864)
T KOG4717|consen 172 G--KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE---------------TLTMIMDC 234 (864)
T ss_pred c--chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh---------------hhhhhhcc
Confidence 3 345667899999999999998886 57899999999999999999998665443 23334444
Q ss_pred hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 624 RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 624 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.. ..+.....+..+||..||..||++|.+.+|+..
T Consensus 235 KY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 235 KY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred cc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 32 345667888999999999999999999999875
No 196
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=7.9e-36 Score=310.31 Aligned_cols=251 Identities=25% Similarity=0.316 Sum_probs=200.9
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.|+..+.||+|+||+||++.+. +++.||+|.+.... ......+.+|++++++++|+|++++.+.+...+..+++||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 3677889999999999999975 68899999876432 2334567889999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 81 IMNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred eccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 9999999999876432 24999999999999999999999999 9999999999999999999999999986543221
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
......|+..|+|||++.+..++.++|+||||+++|+|++|..||............ ........
T Consensus 157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~---~~~~~~~~---------- 221 (285)
T cd05632 157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV---DRRVLETE---------- 221 (285)
T ss_pred --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHhhhccc----------
Confidence 123346899999999999999999999999999999999999999765432221111 11111100
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCC-----HHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPT-----MKEAAF 660 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs-----~~evl~ 660 (700)
..........+.+|+.+||+.+|++||+ +.++++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 222 EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 0112233456789999999999999999 556665
No 197
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.8e-36 Score=312.28 Aligned_cols=260 Identities=24% Similarity=0.352 Sum_probs=195.3
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhc---CCCceeeEEeEEEeC-----C
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQI---NHRNVVKLLGCCLET-----E 459 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~-----~ 459 (700)
+|++.+.||+|+||+||+|... +++.||+|.++... ......+.+|+++++++ +|+||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5788999999999999999976 68899999876432 22234566777777665 799999999988642 4
Q ss_pred cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
..++++||++ ++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence 5689999997 589998876532 23899999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH---hcc
Q 005355 540 RSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK---ENR 616 (700)
Q Consensus 540 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~ 616 (700)
...... .......++..|+|||++.+..++.++||||||+++|+|++|.+||......+.. ........ ...
T Consensus 156 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~---~~~~~~~~~~~~~~ 230 (288)
T cd07863 156 RIYSCQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL---GKIFDLIGLPPEDD 230 (288)
T ss_pred ccccCc--ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHH---HHHHHHhCCCChhh
Confidence 765322 1223345789999999999999999999999999999999999999755432211 11111110 000
Q ss_pred hhh-------hc---chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 617 LFE-------VL---DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 617 ~~~-------~~---d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.. .. ...............+.+|+.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 00 000001111234556889999999999999999999985
No 198
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.2e-36 Score=318.64 Aligned_cols=255 Identities=20% Similarity=0.314 Sum_probs=200.7
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.++||+|+||.||+++++ .++.+|+|++... .......+.+|+.++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999976 5778999987532 2233456888999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.+... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 99999999999986433 3899999999999999999999999 999999999999999999999999998765433
Q ss_pred Cceeeeeeecccccccccccc-----cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFR-----SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
.........||+.|+|||++. ...++.++||||||+++|||++|+.||......+. +...........
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~------~~~i~~~~~~~~- 228 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHKERFQ- 228 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH------HHHHhCCCcccc-
Confidence 333333456999999999986 34678999999999999999999999975543221 111111110000
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKK--RPTMKEAAFE 661 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPs~~evl~~ 661 (700)
. .......+..+.+|+++||..++.+ |++++|+++.
T Consensus 229 ----~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 ----F-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ----C-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 0111234567888999998765444 6899999876
No 199
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.2e-36 Score=311.44 Aligned_cols=263 Identities=25% Similarity=0.362 Sum_probs=201.4
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|++.+.||+|++|.||+|+.. +++.||||+++.. .....+.+.+|+.++++++|+||+++++.+.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999976 6889999987643 233356788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
++ ++|.+++........+++..++.++.||++||+|||+.+ ++|+||||+|||++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 689999876554456899999999999999999999999 9999999999999999999999999987543222
Q ss_pred eeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH--hcc--------
Q 005355 548 HLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK--ENR-------- 616 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~-------- 616 (700)
.......+++.|+|||++.+. .++.++||||||+++++|++|+.||........ ....+..... ...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ--LFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhcchhhH
Confidence 122234568899999988654 578899999999999999999999976543221 1110000000 000
Q ss_pred -hhhhcc---hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 617 -LFEVLD---ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 617 -~~~~~d---~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...... .............++.+++.+||+.||.+|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 234 DYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000 00000111123567789999999999999999999975
No 200
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.1e-36 Score=318.52 Aligned_cols=255 Identities=21% Similarity=0.315 Sum_probs=200.4
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||.||+++.. +++.||+|.+... .......+.+|..++..++|+||+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999976 5788999987642 2334456888999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++..... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999986432 3899999999999999999999999 999999999999999999999999999765433
Q ss_pred Cceeeeeeeccccccccccccc-----CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRS-----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
.........|++.|+|||++.+ ..++.++||||||++||||++|+.||......+. +...........
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~------~~~i~~~~~~~~- 228 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHEERFQ- 228 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH------HHHHHcCCCccc-
Confidence 3333334569999999999875 4678899999999999999999999975543221 111111100000
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKK--RPTMKEAAFE 661 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~--RPs~~evl~~ 661 (700)
+ .......+..+.+++.+||...+++ |++++++++.
T Consensus 229 ~-----p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 F-----PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred C-----CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0 0111223567888999999866544 4688888764
No 201
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.5e-36 Score=319.01 Aligned_cols=243 Identities=25% Similarity=0.351 Sum_probs=192.1
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHH-HHHhhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEV-AILSQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
+.||+|+||.||++++. +++.||+|++.... ......+..|. .+++.++|+||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 47999999999999976 57889999876422 12223444444 456788999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~ 153 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTT 153 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCc
Confidence 99999997643 3788899999999999999999999 9999999999999999999999999987543222 223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||+.|+|||++.+..++.++||||||+++|||++|..||......+. ...+..... ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-------~~~i~~~~~----------~~~ 216 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-------YDNILNKPL----------QLK 216 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH-------HHHHHhCCc----------CCC
Confidence 345689999999999999999999999999999999999999976543221 111111110 111
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
......+.+++.+||+.+|.+||++.+.+.++
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i 248 (325)
T cd05602 217 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 248 (325)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHH
Confidence 23455688999999999999999987544433
No 202
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7e-36 Score=306.47 Aligned_cols=250 Identities=30% Similarity=0.469 Sum_probs=195.4
Q ss_pred ceEeeeCCeEEEEEEEc----CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCceeeEEeEEE-eCCcceEEEeeCC
Q 005355 396 RILGQGGQGTVYKGMLT----NGRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKLLGCCL-ETEVPLLVYEFIP 469 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~E~~~ 469 (700)
+.||+|+||.||+|.+. ....||+|++.. ......+.+.+|+.+++.++|||++++++.+. .....++++||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999864 235799998754 33455678899999999999999999999776 4556789999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce-
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH- 548 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~- 548 (700)
+++|.+++..... .+++..++.++.|+++||+|||+.+ ++||||||+|||+++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 81 HGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 9999999976533 2678888999999999999999999 999999999999999999999999999755322111
Q ss_pred --eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhC-CCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 549 --LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTG-QKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 549 --~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
......++..|+|||++.+..++.++||||||+++|||++| .+||......+ .. .....+...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~---~~----~~~~~~~~~------- 221 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFD---IT----VYLLQGRRL------- 221 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHhcCCCC-------
Confidence 11123456789999999989999999999999999999995 56665433221 11 111111100
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
..+...+..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 222 --~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 222 --LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred --CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 001123456889999999999999999999999998875
No 203
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.3e-37 Score=323.98 Aligned_cols=245 Identities=25% Similarity=0.417 Sum_probs=199.8
Q ss_pred CccceEeeeCCeEEEEEEEc-CCcEEEEEEcc----ccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc--ceEEE
Q 005355 393 NTNRILGQGGQGTVYKGMLT-NGRIVAIKKSK----LVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEV--PLLVY 465 (700)
Q Consensus 393 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~----~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~ 465 (700)
+...+||+|+|-+||+|.+. +|..||--.++ ...+...++|..|+++|+.|+|+||++++..+.+... ..+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 45678999999999999976 57777633222 1345567899999999999999999999999987766 67899
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC-CcEEEeecCCCccccc
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGASRSVMI 544 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~-~~~kl~DfGl~~~~~~ 544 (700)
|++..|+|..|+++.+. +..+.+..|++||++||.|||++. |||+|||||-+||+|+.+ |.|||+|+|||.....
T Consensus 123 EL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999999998865 889999999999999999999988 679999999999999864 8999999999986532
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
.....++|||.|||||++. ..|.+.+||||||+.|+||+|+..||. |..+..+.+..... |.....+..
T Consensus 199 ---s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs-----EC~n~AQIYKKV~S-GiKP~sl~k- 267 (632)
T KOG0584|consen 199 ---SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS-----ECTNPAQIYKKVTS-GIKPAALSK- 267 (632)
T ss_pred ---cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh-----hhCCHHHHHHHHHc-CCCHHHhhc-
Confidence 2234478999999999997 889999999999999999999999996 44444444433332 222211111
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
-..+++.++|.+||.. .++|||+.|+|+
T Consensus 268 -------V~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 -------VKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred -------cCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1134688899999999 999999999987
No 204
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6e-36 Score=321.80 Aligned_cols=263 Identities=25% Similarity=0.332 Sum_probs=198.8
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC-----
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLETE----- 459 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 459 (700)
..++|++.+.||+|+||.||++... .++.||||++.. ........+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4588999999999999999999975 588999998764 23344577889999999999999999999986543
Q ss_pred -cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCC
Q 005355 460 -VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGA 538 (700)
Q Consensus 460 -~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl 538 (700)
..++||||+++ +|.+.+.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence 46899999964 67776643 2788999999999999999999999 99999999999999999999999999
Q ss_pred CcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHH------------H
Q 005355 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV------------G 606 (700)
Q Consensus 539 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~------------~ 606 (700)
++..... .......+|..|+|||++.+..++.++||||||+++|+|++|+.||...+..+..... .
T Consensus 170 a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 170 ARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred ccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 9754222 2223356899999999999999999999999999999999999999866432210000 0
Q ss_pred HHH----HHHHhc-ch-----hhhcchhh---hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 607 YFL----EAMKEN-RL-----FEVLDARV---LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 607 ~~~----~~~~~~-~~-----~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
... ...... .. .+...... ...........+.+|+.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 000000 00 00000000 000011124568899999999999999999999984
No 205
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-36 Score=316.38 Aligned_cols=252 Identities=27% Similarity=0.369 Sum_probs=215.4
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEcC-CcEEEEEEccccCh---hhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcce
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDE---SNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 462 (700)
....|++.+.||+|.||.||+++.+. |+.+|+|.+..... ...+.+.+|+.+|+++. ||||+.+.+.+.+.+..+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 35678888999999999999999874 99999998765332 34578999999999998 999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC----CCcEEEeecCC
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDFGA 538 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~----~~~~kl~DfGl 538 (700)
+|||++.+|.|.+.|... . +++..+..++.|++.|+.|||+.+ |+||||||+|+|+.. ++.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~--~--~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--H--YSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc--c--CCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999877 2 999999999999999999999999 999999999999953 35799999999
Q ss_pred CcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchh
Q 005355 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF 618 (700)
Q Consensus 539 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (700)
+..... .......+||+.|+|||++....|+..+||||+|+++|.|++|..||......+... .+..+.+
T Consensus 186 a~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~~~- 255 (382)
T KOG0032|consen 186 AKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRGDF- 255 (382)
T ss_pred ceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcCCC-
Confidence 987654 455677889999999999999999999999999999999999999998776544211 2222222
Q ss_pred hhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 619 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
....+........+.++++++|..||.+|+|+.++++.
T Consensus 256 -----~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 -----DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -----CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 12233345567788999999999999999999999993
No 206
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7.2e-36 Score=316.26 Aligned_cols=241 Identities=25% Similarity=0.374 Sum_probs=195.6
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcceEEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 465 (700)
+|+..+.||+|+||.||++... +++.||||++... .....+.+..|..++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999976 6889999987642 2334566788999998885 577888999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999997653 3899999999999999999999999 999999999999999999999999998754322
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
. .......||+.|+|||++.+..++.++||||||+++|||++|..||........ ...+.....
T Consensus 155 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-------~~~i~~~~~-------- 218 (323)
T cd05615 155 G-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL-------FQSIMEHNV-------- 218 (323)
T ss_pred C-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhCCC--------
Confidence 2 122345589999999999999999999999999999999999999976543221 111111111
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTM 655 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~ 655 (700)
..+...+..+.+++.+||+.+|.+|++.
T Consensus 219 --~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 --SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred --CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1122334567889999999999999984
No 207
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.9e-36 Score=319.64 Aligned_cols=242 Identities=26% Similarity=0.383 Sum_probs=192.5
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHH-HHhhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVA-ILSQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
+.||+|+||+||+++.. +++.||+|++... .......+..|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999975 6899999987642 2233445556655 46778999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~ 153 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTT 153 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCc
Confidence 99999987543 3899999999999999999999999 999999999999999999999999998753221 1223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....|++.|+|||++.+..++.++||||||+++|||++|..||...+..+. ...+..... ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-------~~~~~~~~~----------~~~ 216 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM-------YDNILHKPL----------VLR 216 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH-------HHHHHcCCc----------cCC
Confidence 345689999999999999999999999999999999999999976543221 111111111 011
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
......+.+++.+||+.+|.+||++++.+++
T Consensus 217 ~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 217 PGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred CCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 1234567889999999999999998644433
No 208
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=7e-36 Score=305.55 Aligned_cols=248 Identities=27% Similarity=0.428 Sum_probs=201.6
Q ss_pred ceEeeeCCeEEEEEEEcC--C--cEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLTN--G--RIVAIKKSKLVDE-SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|++|.||+|.+.. + ..||||.+..... ...+.+.+|+.++++++|+||+++++.+.+ ...++++||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999753 2 3699999887555 567889999999999999999999999988 888999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce--
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH-- 548 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~-- 548 (700)
++|.+++..... ..+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 999999987542 35899999999999999999999999 999999999999999999999999999876432221
Q ss_pred eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......++..|+|||++.+..++.++||||||+++|||++ |..||......+. ... ....... .
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~---~~~~~~~---------~ 220 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI---LKK---IDKEGER---------L 220 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH---HHH---HHhcCCc---------C
Confidence 1122346788999999999999999999999999999998 9999965443221 111 1100000 0
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
..+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 111234567889999999999999999999999885
No 209
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.6e-36 Score=309.61 Aligned_cols=253 Identities=25% Similarity=0.388 Sum_probs=200.5
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeC------
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCLET------ 458 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------ 458 (700)
.+.+.|++.+.||+|+||.||+|... .++.||+|+..... .....+.+|+.+++++ +|+||+++++.+...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45678899999999999999999975 57899999886543 3346788999999998 799999999998753
Q ss_pred CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCC
Q 005355 459 EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGA 538 (700)
Q Consensus 459 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl 538 (700)
...+++|||+++++|.+++..... ..+++..+..++.|++.||+|||+++ |+|+||||+||++++++.+||+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCC
Confidence 357899999999999999986432 34899999999999999999999999 99999999999999999999999999
Q ss_pred CcccccCCceeeeeeecccccccccccc-----cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH
Q 005355 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFR-----SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613 (700)
Q Consensus 539 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 613 (700)
+....... .......|+..|+|||++. ...++.++||||||+++|||++|..||......... . ...
T Consensus 158 ~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-----~--~~~ 229 (272)
T cd06637 158 SAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-----F--LIP 229 (272)
T ss_pred ceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-----H--HHh
Confidence 87543222 2233456889999999986 345788999999999999999999999644322111 0 001
Q ss_pred hcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 614 ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 614 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
....... .....+..+.+|+.+||+.+|.+|||+.|+++
T Consensus 230 ~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 RNPAPRL--------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCCCCCC--------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 1110011 11223456889999999999999999999975
No 210
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.2e-36 Score=306.23 Aligned_cols=240 Identities=23% Similarity=0.418 Sum_probs=191.9
Q ss_pred ceEeeeCCeEEEEEEEcC-------------CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 396 RILGQGGQGTVYKGMLTN-------------GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
+.||+|+||.||+|++.. ...|++|.+..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999998532 2358999877665566678899999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCc-------EEEee
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR-------AKVSD 535 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~-------~kl~D 535 (700)
+||||+++++|..++..... .+++..++.++.||++||+|||+++ |+||||||+|||++.++. +|++|
T Consensus 81 lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred EEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 99999999999999875432 3899999999999999999999999 999999999999987654 89999
Q ss_pred cCCCcccccCCceeeeeeecccccccccccc-cCCCCcccceehHHHHHHHHH-hCCCCCCCCCchhhhhHHHHHHHHHH
Q 005355 536 FGASRSVMIDQTHLTTRVQGTFGYLDPEYFR-SSQFTEKSDVYSFGVVLVELL-TGQKPIRSTDSEEDKSLVGYFLEAMK 613 (700)
Q Consensus 536 fGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDVwSlG~il~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~ 613 (700)
||++...... ....++..|+|||.+. +..++.++||||||+++|||+ .|..||......+.. ...
T Consensus 156 ~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-------~~~- 222 (262)
T cd05077 156 PGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-------RFY- 222 (262)
T ss_pred CCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-------HHH-
Confidence 9998654222 2234778899999987 467899999999999999998 588887654322211 000
Q ss_pred hcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 614 ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 614 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
.... .. .......+.+|+.+||+.||++||+++++++.|+
T Consensus 223 ~~~~-~~---------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 223 EGQC-ML---------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred hcCc-cC---------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 1110 00 1112356889999999999999999999998863
No 211
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4e-36 Score=311.95 Aligned_cols=263 Identities=28% Similarity=0.427 Sum_probs=208.2
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-----CCcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEe--CCcc
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-----NGRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLE--TEVP 461 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 461 (700)
+.|++.+.||+|+||.||++.+. .++.+|||.+...... ..+.|.+|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 46778899999999999999864 3678999998765443 56789999999999999999999999877 5578
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
+++|||+++++|.+++..... .+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 999999999999999986543 3899999999999999999999999 99999999999999999999999999987
Q ss_pred cccCCcee--eeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhh--------hHHHHHHHH
Q 005355 542 VMIDQTHL--TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK--------SLVGYFLEA 611 (700)
Q Consensus 542 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~--------~~~~~~~~~ 611 (700)
........ .....++..|+|||.+.+..++.++||||||++++||++|..|+......... .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLEL 238 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHH
Confidence 64322211 11223456799999999889999999999999999999999998654322110 001111111
Q ss_pred HHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 612 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
+... .....+...+..+.+|+.+||+.+|++||++.||+++|+++.
T Consensus 239 ~~~~---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 239 LKEG---------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred HHcC---------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 1111 111112233467899999999999999999999999998863
No 212
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.7e-36 Score=340.36 Aligned_cols=261 Identities=23% Similarity=0.340 Sum_probs=206.6
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.++||+|+||.||+|.+. .++.||||++... .....+++.+|++++++++||||+++++++.+.+..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999976 5899999987642 2334567999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 466 EFIPNGTLYQYIHDQTE--------EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
||+++++|.+++..... ...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999975211 123567788999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCc-----------------eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchh
Q 005355 538 ASRSVMIDQT-----------------HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE 600 (700)
Q Consensus 538 l~~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~ 600 (700)
+++....... .......||+.|+|||++.+..++.++||||||+++|||++|..||......+
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986521110 01122468999999999999999999999999999999999999997533221
Q ss_pred hhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHhchh
Q 005355 601 DKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRP-TMKEAAFELGGIRA 667 (700)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-s~~evl~~L~~l~~ 667 (700)
.. .. .. ..++... ......+..+.+++.+||+.||++|| +++++++.|+....
T Consensus 239 i~-----~~-----~~---i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 IS-----YR-----DV---ILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hh-----hh-----hh---ccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 10 00 00 0011000 00123455688999999999999995 67888888877654
No 213
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1e-35 Score=308.93 Aligned_cols=250 Identities=25% Similarity=0.338 Sum_probs=202.4
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
|++.+.||+|+||.||++... .+..+++|.+........+.+.+|+++++.++|+|++++++.+...+..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 577789999999999999976 4778899998776667778899999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|..++.+.. .++++..+..++.|+++||.|||+.+ ++||||||+|||++.++.+||+|||++...... ....
T Consensus 87 ~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~~~ 160 (282)
T cd06643 87 GAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRR 160 (282)
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccccc-cccc
Confidence 99999887533 24899999999999999999999999 999999999999999999999999998754322 1222
Q ss_pred eeeecccccccccccc-----cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 551 TRVQGTFGYLDPEYFR-----SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
....++..|+|||++. ...++.++||||||+++|||++|..||......+. ....... .....
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~-~~~~~----- 228 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKS-EPPTL----- 228 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH------HHHHhhc-CCCCC-----
Confidence 3345889999999984 34578899999999999999999999975443221 1111111 10000
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..+...+..+.+|+.+||+.+|.+||++.++++.
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 --AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred --CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122344578899999999999999999998753
No 214
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.4e-35 Score=307.41 Aligned_cols=257 Identities=26% Similarity=0.485 Sum_probs=207.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCc----EEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGR----IVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
..+|++.+.||+|+||.||+|.+. +++ .||+|...... ......+.+|+.++++++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 467888899999999999999965 232 68999876543 3456788999999999999999999999887 7889
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+|+||+++|+|.+++..... .+++..++.++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|||+++..
T Consensus 85 ~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccc
Confidence 99999999999999986543 3899999999999999999999999 999999999999999999999999999866
Q ss_pred ccCCceee-eeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 543 MIDQTHLT-TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 543 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
........ ....++..|+|||.+....++.++||||||+++|||++ |..||......+ +...+..+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------~~~~~~~~~~~-- 230 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE-------IPDLLEKGERL-- 230 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHhCCCCC--
Confidence 43322211 11223568999999988899999999999999999998 999997654332 11122211110
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchh
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRA 667 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~ 667 (700)
..+......+.+++.+||..+|.+||++.++++.|+++..
T Consensus 231 -------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 231 -------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111233467889999999999999999999999998854
No 215
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.9e-35 Score=308.58 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=205.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
.+.|++.++||+|+||.||+|+.. +++.|++|.+...+....+.+.+|+.+++.++|+||+++++.+......++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 367889999999999999999976 5889999998877777778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|..++..... .+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 91 ~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~ 164 (292)
T cd06644 91 CPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-L 164 (292)
T ss_pred CCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc-c
Confidence 999999998865433 3899999999999999999999999 999999999999999999999999988653222 1
Q ss_pred eeeeeeecccccccccccc-----cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 548 HLTTRVQGTFGYLDPEYFR-----SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
.......+++.|+|||++. ...++.++||||||+++|||++|..||......+ ....... .....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~~~~~-~~~~~--- 234 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAK-SEPPT--- 234 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH------HHHHHhc-CCCcc---
Confidence 1223445788999999984 3457889999999999999999999986543221 1111111 11000
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...+...+..+.+++.+||+.+|++||+++++++
T Consensus 235 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 235 ----LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ----CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0112234457889999999999999999999976
No 216
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8e-36 Score=312.20 Aligned_cols=250 Identities=26% Similarity=0.392 Sum_probs=206.6
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..+|++.+.||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++|+||+++++.+...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 477899999999999999999964 7899999998765555667889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++... .+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 98 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred cCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9999999999654 2889999999999999999999999 99999999999999999999999999875433222
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......+++.|+|||.+.+..++.++||||||+++|+|++|..||...+...... .....+. ...
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~~~--------~~~ 235 (297)
T cd06656 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGT--------PEL 235 (297)
T ss_pred -CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccCCC--------CCC
Confidence 1223457889999999999999999999999999999999999997554322100 0000000 001
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+...+..+.+++.+||+.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112334456788999999999999999999998
No 217
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.3e-35 Score=305.11 Aligned_cols=250 Identities=26% Similarity=0.487 Sum_probs=202.8
Q ss_pred CCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccC------hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVD------ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
+|+..+.||+|+||.||+|...+++.+|||.+.... ....+.+.+|++++++++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 478889999999999999998889999999876422 22346788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
+||+++++|.+++.+.. ++++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997643 3889999999999999999999999 99999999999999999999999999875422
Q ss_pred CC-----ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 545 DQ-----THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 545 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
.. ........++..|+|||++.+..++.++||||||+++++|++|..||...+..+.. .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~------~~~~~~~~~-- 226 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM------FYIGAHRGL-- 226 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH------HHhhhccCC--
Confidence 11 11122345888999999999999999999999999999999999999754322211 000000000
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
....+......+.+++++||+.+|.+||++.|+++
T Consensus 227 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 227 ------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 01122334567889999999999999999999875
No 218
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1e-35 Score=303.98 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=206.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcC-CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
.++|+..+.||+|+||.||+|.+.+ ++.+++|.+..... .+.+.+|++++++++|+||+++++.+.+....++++||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 4688999999999999999999874 78999999875433 67899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++..... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 80 ~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 80 CGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred CCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 999999999975432 4899999999999999999999999 99999999999999999999999999886543321
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......++..|+|||++.+..++.++||||||+++|+|++|+.||......+.. ........ . ..
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~-------~~~~~~~~-----~--~~ 219 (256)
T cd06612 155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI-------FMIPNKPP-----P--TL 219 (256)
T ss_pred -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh-------hhhccCCC-----C--CC
Confidence 223345788999999999999999999999999999999999999754332210 00000000 0 01
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+......+.+++.+||+.+|++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 112234467899999999999999999999986
No 219
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.8e-36 Score=323.40 Aligned_cols=252 Identities=25% Similarity=0.354 Sum_probs=199.0
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|+..+.||+|+||.||++... +++.||||++... .......+.+|+.++.+++|+||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999976 6889999988642 2334567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999997653 3899999999999999999999999 999999999999999999999999998754211
Q ss_pred Cc----------------------------------eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCC
Q 005355 546 QT----------------------------------HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQK 591 (700)
Q Consensus 546 ~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~ 591 (700)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 10 00123468999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 005355 592 PIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT---MKEAAFE 661 (700)
Q Consensus 592 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs---~~evl~~ 661 (700)
||......+.. ..+.... ..+. .... ......+.+|+.+++ .+|.+|++ +.|+++.
T Consensus 235 Pf~~~~~~~~~-------~~i~~~~--~~~~--~p~~--~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 235 PFCSETPQETY-------RKVMNWK--ETLV--FPPE--VPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCHHHHH-------HHHHcCC--Ccee--cCCC--CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 99765543211 1111100 0000 0000 113456778888876 49999985 5666653
No 220
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.5e-35 Score=302.70 Aligned_cols=253 Identities=24% Similarity=0.378 Sum_probs=193.9
Q ss_pred ceEeeeCCeEEEEEEEcC---CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 396 RILGQGGQGTVYKGMLTN---GRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
+.||+|+||.||+|.+.+ +..+|+|+++... ......+.+|+.++++++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 468999999999998653 4579999877543 333457889999999999999999999999999999999999999
Q ss_pred CHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 472 TLYQYIHDQTE--EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 472 sL~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+|.++++.... ....++..+..++.|++.||+|||+.+ ++|+||||+||+++.++++||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999976432 234677888899999999999999999 9999999999999999999999999987543222211
Q ss_pred -eeeeecccccccccccccC-------CCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 550 -TTRVQGTFGYLDPEYFRSS-------QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 550 -~~~~~gt~~y~aPE~~~~~-------~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
.....++..|+|||++... .++.++||||||+++|||++ |..||......+.. .. ... +.....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~---~~---~~~-~~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL---TY---TVR-EQQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH---HH---Hhh-cccCCC
Confidence 1234467889999998643 35789999999999999996 99999755433211 00 011 111111
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
.++.+ .......+.+++.+|+ .+|++|||++||++.|+
T Consensus 231 ~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11111 1123345778999998 58999999999999875
No 221
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.4e-36 Score=318.50 Aligned_cols=263 Identities=27% Similarity=0.362 Sum_probs=206.0
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcC-C-----CceeeEEeEEEeCCc
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQIN-H-----RNVVKLLGCCLETEV 460 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~ 460 (700)
..-+|.+++.||+|.||.|.++.+. +++.||||+++.... -..+...|+.+|..|+ | -|+|+++++|...++
T Consensus 184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 3448999999999999999999965 699999999986433 3466788999999997 4 489999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC--CCcEEEeecCC
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD--KYRAKVSDFGA 538 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~--~~~~kl~DfGl 538 (700)
.+||+|.+ ..+|.++|+.+.-+. ++...+..++.||+.||.+||+.+ |||.||||+||||.+ ...+||+|||.
T Consensus 263 lciVfELL-~~NLYellK~n~f~G-lsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRG-LSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccc
Confidence 99999999 679999999876543 999999999999999999999999 999999999999964 34799999999
Q ss_pred CcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--------HH
Q 005355 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF--------LE 610 (700)
Q Consensus 539 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~--------~~ 610 (700)
+.... .... ....+..|+|||++.+.+|+.+.||||||||+.||++|.+.|.+.+..+....+..+ +.
T Consensus 338 Sc~~~---q~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~ 413 (586)
T KOG0667|consen 338 SCFES---QRVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLD 413 (586)
T ss_pred ccccC---Ccce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 97542 1222 455788899999999999999999999999999999999999887754432222111 11
Q ss_pred HHHh-cchh-------------h-----------------hcchhhh-------hccCHHHHHHHHHHHHHHhccCCCCC
Q 005355 611 AMKE-NRLF-------------E-----------------VLDARVL-------KEAKEEEIITVAMLAKRCLNMIGKKR 652 (700)
Q Consensus 611 ~~~~-~~~~-------------~-----------------~~d~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~R 652 (700)
.... .++. . ..+...+ ..........+.+++++||.+||.+|
T Consensus 414 ~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R 493 (586)
T KOG0667|consen 414 TAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAER 493 (586)
T ss_pred hccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhc
Confidence 1100 0000 0 0000011 00112344568999999999999999
Q ss_pred CCHHHHHH
Q 005355 653 PTMKEAAF 660 (700)
Q Consensus 653 Ps~~evl~ 660 (700)
+|+.++++
T Consensus 494 ~tp~qal~ 501 (586)
T KOG0667|consen 494 ITPAQALN 501 (586)
T ss_pred CCHHHHhc
Confidence 99999987
No 222
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.5e-35 Score=302.95 Aligned_cols=251 Identities=27% Similarity=0.385 Sum_probs=207.1
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|+..+.||+|+||.||.++.. +++.+++|.+... ......++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5888999999999999999865 5889999986643 345567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999998653 234899999999999999999999999 99999999999999999999999999876543332
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......+++.|+|||++.+..++.++||||||+++|||++|..||......+. ...+..+.+..
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~-------~~~~~~~~~~~-------- 220 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL-------VVKIVQGNYTP-------- 220 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH-------HHHHHcCCCCC--------
Confidence 23345588999999999988899999999999999999999999975443221 11111222111
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
.....+..+.+++.+||+.+|++||+++++++.+
T Consensus 221 -~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 221 -VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 1123455788999999999999999999998753
No 223
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-35 Score=318.47 Aligned_cols=260 Identities=23% Similarity=0.382 Sum_probs=194.4
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
....+|++.+.||+|+||.||+|+.. .++.||+|+... .....|+.++++++|+||+++++++.+....++|+
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 34567999999999999999999976 567899997543 22456999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
|++ .++|.+++..... .+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 137 e~~-~~~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 137 PHY-SSDLYTYLTKRSR--PLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred Ecc-CCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 999 5689988876433 4899999999999999999999999 999999999999999999999999998743221
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCC-CCCCchhh---hhHHHHHHHHHHhcch-hh-
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPI-RSTDSEED---KSLVGYFLEAMKENRL-FE- 619 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~-~~~~~~~~---~~~~~~~~~~~~~~~~-~~- 619 (700)
.......||..|+|||++.+..++.++||||||+++|||+++..|+ ........ ......+...+..... ..
T Consensus 211 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 288 (357)
T PHA03209 211 --PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEE 288 (357)
T ss_pred --cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhh
Confidence 1223456899999999999999999999999999999999865554 32221110 1111111111111000 00
Q ss_pred hc---chhhhh------------------ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 VL---DARVLK------------------EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 ~~---d~~~~~------------------~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.. ...... .........+.+|+.+||+.||++|||++|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 289 FPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred cCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 00 000000 000122345667999999999999999999986
No 224
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7.5e-36 Score=316.00 Aligned_cols=237 Identities=24% Similarity=0.359 Sum_probs=189.7
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHH-HHhhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVA-ILSQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
++||+|+||.||+|+.. +++.||+|++.... ......+..|.. +++.++|+||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999976 68899999876421 223344555554 57889999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||||+.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~ 153 (321)
T cd05603 81 GELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETT 153 (321)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Ccc
Confidence 99999887543 3889999999999999999999999 9999999999999999999999999987532221 223
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....||+.|+|||++.+..++.++||||||+++|||++|..||...+..+ ....+.... ...+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~i~~~~----------~~~~ 216 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ-------MYDNILHKP----------LQLP 216 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH-------HHHHHhcCC----------CCCC
Confidence 34568999999999999999999999999999999999999997654222 111111111 1112
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTMK 656 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~~ 656 (700)
......+.+++.+||+.+|.+||++.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 217 GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 23455788999999999999999864
No 225
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.8e-36 Score=311.33 Aligned_cols=250 Identities=26% Similarity=0.409 Sum_probs=206.6
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..+|++.+.||.|+||.||+|... +++.|++|.+........+.+.+|+.+++.++|+|++++++.+...+..++|+||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 356899999999999999999864 6899999988765555667889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++... .+++.++..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 98 LAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred cCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 9999999998754 3899999999999999999999999 99999999999999999999999999876543322
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||...+..+.. ....... ... .
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~------~~~~~~~-~~~-------~ 235 (296)
T cd06655 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNG-TPE-------L 235 (296)
T ss_pred -cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhcC-Ccc-------c
Confidence 122345888999999999989999999999999999999999999765433211 1111110 000 0
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+...+..+.+++.+||..+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 236 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 112234456888999999999999999999986
No 226
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8e-36 Score=320.38 Aligned_cols=264 Identities=22% Similarity=0.285 Sum_probs=200.0
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC-----
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLET----- 458 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 458 (700)
...++|++.+.||+|+||.||++... .++.||||++... .....+.+.+|+.+++.++|+||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34678999999999999999999865 5889999988643 334457788999999999999999999988643
Q ss_pred -CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 459 -EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 459 -~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
...++||||+++ +|.+.+.. .+++..+..++.|+++||+|||+++ |+||||||+||||+.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCc
Confidence 346899999964 67777653 2889999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHH-HH---------
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV-GY--------- 607 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~-~~--------- 607 (700)
+++.... ........+|..|+|||++.+..++.++||||||+++|+|++|+.||...+..+..... ..
T Consensus 165 ~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 165 LARTAGT--SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccccCCC--ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9975422 22223456899999999999999999999999999999999999999765532211100 00
Q ss_pred ------HHHHHHhc-chhhhcchhh--------hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 608 ------FLEAMKEN-RLFEVLDARV--------LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 608 ------~~~~~~~~-~~~~~~d~~~--------~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
........ .......+.. ...........+.+|+.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000 0000000000 000111234568899999999999999999999984
No 227
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.7e-36 Score=331.42 Aligned_cols=266 Identities=20% Similarity=0.270 Sum_probs=196.6
Q ss_pred HHHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCC------CceeeEEeEE
Q 005355 383 MELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINH------RNVVKLLGCC 455 (700)
Q Consensus 383 ~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~ 455 (700)
.++....++|++.++||+|+||+||+|.+. .++.||||+++... .....+..|+++++.++| .+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344556789999999999999999999975 57889999986532 223456677777777654 4588898888
Q ss_pred EeC-CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEECCCC----
Q 005355 456 LET-EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLDDKY---- 529 (700)
Q Consensus 456 ~~~-~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~~~~---- 529 (700)
... ...++|||++ +++|.+++.+.. .+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~ 273 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVD 273 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccc
Confidence 755 4678899988 778999887653 38999999999999999999998 48 99999999999998665
Q ss_pred ------------cEEEeecCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCC
Q 005355 530 ------------RAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597 (700)
Q Consensus 530 ------------~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~ 597 (700)
.+||+|||++... ........||+.|+|||++.+..++.++|||||||+||||++|+.||....
T Consensus 274 ~~~~~~~~~~~~~vkl~DfG~~~~~----~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 274 PVTNRALPPDPCRVRICDLGGCCDE----RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred cccccccCCCCceEEECCCCccccC----ccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 4999999987532 122334568999999999999999999999999999999999999998765
Q ss_pred chhhhhHHHHHHHH----HH--------------hcchhhhcchhhhhc-------cCHHHHHHHHHHHHHHhccCCCCC
Q 005355 598 SEEDKSLVGYFLEA----MK--------------ENRLFEVLDARVLKE-------AKEEEIITVAMLAKRCLNMIGKKR 652 (700)
Q Consensus 598 ~~~~~~~~~~~~~~----~~--------------~~~~~~~~d~~~~~~-------~~~~~~~~l~~li~~cl~~~p~~R 652 (700)
..+........... +. .+.+....++..... ........+.+||.+||+.||++|
T Consensus 350 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 429 (467)
T PTZ00284 350 NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR 429 (467)
T ss_pred hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence 43322222111000 00 000000000000000 001123467899999999999999
Q ss_pred CCHHHHHH
Q 005355 653 PTMKEAAF 660 (700)
Q Consensus 653 Ps~~evl~ 660 (700)
||++|+++
T Consensus 430 ~ta~e~L~ 437 (467)
T PTZ00284 430 LNARQMTT 437 (467)
T ss_pred CCHHHHhc
Confidence 99999997
No 228
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.4e-35 Score=307.56 Aligned_cols=253 Identities=26% Similarity=0.352 Sum_probs=207.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
.++|++.+.||+|+||.||++.+. +++.+|+|..........+.+.+|++++++++|+||+++++.+......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 567899999999999999999975 6889999998877777778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++..... .+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~- 157 (280)
T cd06611 84 CDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL- 157 (280)
T ss_pred cCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc-
Confidence 999999999976433 4899999999999999999999999 9999999999999999999999999887543222
Q ss_pred eeeeeeecccccccccccc-----cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 548 HLTTRVQGTFGYLDPEYFR-----SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
.......++..|+|||++. ...++.++||||||+++|+|++|+.||......+. .. .+.......
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~------~~-~~~~~~~~~--- 227 (280)
T cd06611 158 QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV------LL-KILKSEPPT--- 227 (280)
T ss_pred cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH------HH-HHhcCCCCC---
Confidence 2223456889999999974 34577899999999999999999999975533221 11 111111000
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+...+..+.+++.+||+.+|.+||++.++++.
T Consensus 228 ----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 228 ----LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ----cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 01112344578899999999999999999999774
No 229
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.5e-35 Score=306.25 Aligned_cols=248 Identities=28% Similarity=0.397 Sum_probs=204.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
++|++.+.||.|+||.||+|.+. +++.||+|.+.... ......+.+|+++++.++|+|++++++.+.+....++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888899999999999999976 68899999876543 44456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++... .+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 152 (274)
T cd06609 81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM- 152 (274)
T ss_pred eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence 9999999999765 4899999999999999999999999 9999999999999999999999999997664332
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
.......++..|+|||++.+..++.++||||||+++|+|++|..||......+ ....+....... +..
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-------~~~~~~~~~~~~-----~~~ 220 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-------VLFLIPKNNPPS-----LEG 220 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-------HHHHhhhcCCCC-----Ccc
Confidence 12233457889999999999889999999999999999999999997544221 111111111111 100
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...+..+.+++.+||..+|++||+++++++
T Consensus 221 ---~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 221 ---NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ---cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 114557889999999999999999999987
No 230
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-35 Score=306.83 Aligned_cols=239 Identities=23% Similarity=0.406 Sum_probs=189.9
Q ss_pred eEeeeCCeEEEEEEEcC-------------------------CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeE
Q 005355 397 ILGQGGQGTVYKGMLTN-------------------------GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKL 451 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 451 (700)
.||+|+||.||+|.+.. ...|++|++..........+.+|+.++++++|+||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999998521 13588998876555556788999999999999999999
Q ss_pred EeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC--
Q 005355 452 LGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-- 529 (700)
Q Consensus 452 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~-- 529 (700)
++++.+....++||||+++++|..++..... .+++..++.++.||++||+|||+++ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence 9999999999999999999999999976433 3889999999999999999999999 99999999999997643
Q ss_pred -----cEEEeecCCCcccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHH-hCCCCCCCCCchhhh
Q 005355 530 -----RAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELL-TGQKPIRSTDSEEDK 602 (700)
Q Consensus 530 -----~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~ell-tg~~p~~~~~~~~~~ 602 (700)
.+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|..||......+..
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 231 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE 231 (274)
T ss_pred cCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH
Confidence 4899999988643221 12346788999998875 56899999999999999995 699998755433211
Q ss_pred hHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 603 SLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
. + ..... ..+......+.+++.+||+.+|++||+++++++.|.
T Consensus 232 ~----~---~~~~~-----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 232 R----F---YEKKH-----------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H----H---HHhcc-----------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1 1 00000 001112346889999999999999999999999873
No 231
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.4e-35 Score=302.33 Aligned_cols=254 Identities=26% Similarity=0.381 Sum_probs=208.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
.++|++.+.||+|+||.||++... +++.+++|.+........+.+.+|++++++++|+||+++++.+.+.+..+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 467899999999999999999975 5788999998876666778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++..... .+++..+..++.|++.||+|||+++ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 155 (262)
T cd06613 82 CGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI- 155 (262)
T ss_pred CCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh-
Confidence 999999999876522 3899999999999999999999999 9999999999999999999999999987653221
Q ss_pred eeeeeeecccccccccccccC---CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSS---QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~---~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
.......++..|+|||.+... .++.++||||||+++|+|++|+.||......+... ......+. ...
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~-------~~~~~~~~---~~~ 225 (262)
T cd06613 156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF-------LISKSNFP---PPK 225 (262)
T ss_pred hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH-------HHHhccCC---Ccc
Confidence 122334578899999999776 88999999999999999999999997654322110 01111000 000
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.......+..+.+++.+||..+|.+||++.+++.
T Consensus 226 --~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 226 --LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0112344567899999999999999999999975
No 232
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.4e-35 Score=303.36 Aligned_cols=248 Identities=28% Similarity=0.511 Sum_probs=201.3
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh---------hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE---------SNIEQFINEVAILSQINHRNVVKLLGCCLETEV 460 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 460 (700)
+|.+.+.||+|+||.||+|... +++.+|+|.+..... ...+.+.+|+.++++++|+||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677889999999999999975 578999998764322 123578899999999999999999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.++++||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||+++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997653 3889999999999999999999999 9999999999999999999999999988
Q ss_pred ccccCCce-----eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc
Q 005355 541 SVMIDQTH-----LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN 615 (700)
Q Consensus 541 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 615 (700)
........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.||........ ... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~~~-~~~~ 227 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA------IFK-IGEN 227 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH------HHH-Hhcc
Confidence 66422111 11224578899999999998999999999999999999999999975432111 010 1100
Q ss_pred chhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 616 RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 616 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.. ...+...+..+.+++++||+.+|.+||++.|+++
T Consensus 228 -----~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 -----AS----PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -----CC----CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11 1122334567889999999999999999999986
No 233
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-35 Score=308.11 Aligned_cols=252 Identities=26% Similarity=0.414 Sum_probs=203.3
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
++|++.+.||+|+||.||++.+. .++.||+|.+... .......+.+|++++++++|+||+++++.+...+..++|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 46888999999999999999976 6899999987653 344557899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
+++++|..++........+++..+..++.||+.||.|||+. + ++|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999987653333589999999999999999999974 7 999999999999999999999999998754322
Q ss_pred ceeeeeeecccccccccccccC------CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSS------QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~------~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
......++..|+|||++.+. .++.++||||||+++|+|++|+.||........ .... ..+..+.
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~~-~~~~~~~---- 226 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI---FAQL-SAIVDGD---- 226 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH---HHHH-HHHhhcC----
Confidence 22234578899999998554 358899999999999999999999965432211 1111 1111111
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
....+......+.+++.+||+.+|++||+++++++
T Consensus 227 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 227 -----PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred -----CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 11223345677889999999999999999999987
No 234
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-38 Score=301.90 Aligned_cols=251 Identities=24% Similarity=0.376 Sum_probs=211.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..-|.++.+||+|.||.||+|.++ .|+.||||+... +.+.+++..|+.++++...+++|+++|.+.....+++||||
T Consensus 32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 344677889999999999999987 699999998775 45568899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+..|++.++++..+ .+|++.++..+++..++||+|||... -+|||||..|||++.+|.+||+|||.+..+.. .-
T Consensus 110 CGAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD-TM 183 (502)
T KOG0574|consen 110 CGAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTD-TM 183 (502)
T ss_pred cCCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhh-hH
Confidence 99999999998754 35999999999999999999999988 79999999999999999999999999976532 22
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
....++.||+-|||||++..-.|..++||||||++..||.-|++||....+... .-++. ..+...-
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA-------IFMIP-------T~PPPTF 249 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA-------IFMIP-------TKPPPTF 249 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccce-------eEecc-------CCCCCCC
Confidence 334567899999999999999999999999999999999999999975543211 00011 1111112
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..+...+.++.+++++||..+|++|.|+.++++.
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 2345567789999999999999999999888773
No 235
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.8e-35 Score=302.35 Aligned_cols=251 Identities=32% Similarity=0.528 Sum_probs=204.5
Q ss_pred CCccceEeeeCCeEEEEEEEcC-----CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 392 FNTNRILGQGGQGTVYKGMLTN-----GRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
|++.+.||.|+||.||++.+.+ +..||+|.+...... ..+.+.+|+++++.++|+||+++++.+.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 4567899999999999999763 388999998765433 5678999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++++|.+++...... .+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence 999999999999865432 2899999999999999999999999 999999999999999999999999999866443
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
.........+++.|+|||.+.+..++.++||||||+++++|++ |..||......+ .......+...
T Consensus 157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~------ 223 (258)
T smart00219 157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE-------VLEYLKKGYRL------ 223 (258)
T ss_pred cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHhcCCCC------
Confidence 2222222336789999999988889999999999999999998 788886533222 11112211111
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
..+...+..+.+++.+||..+|++|||+.|+++.|
T Consensus 224 ---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 224 ---PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11122456788999999999999999999999865
No 236
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-35 Score=324.34 Aligned_cols=261 Identities=22% Similarity=0.331 Sum_probs=197.9
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
...|.+.+.||+|+||.||++.+. .++.||||.... ..+.+|++++++++|+||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999976 578899996432 3467899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+ .++|.+++..... .+++..++.++.||+.||.|||+++ |+||||||+||||+.++.+||+|||+++.......
T Consensus 242 ~-~~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 Y-RSDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred c-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 9 4789988875432 4999999999999999999999999 99999999999999999999999999976533221
Q ss_pred e-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCch-hhhhHHHHHHHHHHhcch-----hhh
Q 005355 548 H-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE-EDKSLVGYFLEAMKENRL-----FEV 620 (700)
Q Consensus 548 ~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~ 620 (700)
. ......||..|+|||++.+..++.++||||||++||||++|..|+...... ........+...+..... ...
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 395 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQH 395 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCC
Confidence 1 222356999999999999999999999999999999999987665332211 111111111112211110 000
Q ss_pred cchhhhh------------ccC-------HHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 621 LDARVLK------------EAK-------EEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 621 ~d~~~~~------------~~~-------~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
....+.. ... ......+.+|+.+||+.||++|||+.|+++.
T Consensus 396 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 396 AGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred cchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000 000 0123468889999999999999999999874
No 237
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.2e-35 Score=304.36 Aligned_cols=248 Identities=28% Similarity=0.395 Sum_probs=205.7
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..|+..+.||+|+||.||+|.+. .++.||+|.+.... ....+.+.+|+.++++++|+||+++++.+.+.+..++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45778889999999999999976 58899999876533 44567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++... ++++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06640 84 LGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc-
Confidence 9999999998753 3889999999999999999999999 9999999999999999999999999997653322
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
.......++..|+|||++.+..++.++|+||||+++|||++|..||......... ...... ...
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-------~~~~~~---------~~~ 219 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-------FLIPKN---------NPP 219 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-------hhhhcC---------CCC
Confidence 1223345788999999999889999999999999999999999999754432211 011111 112
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
......+..+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 2234566788999999999999999999999875
No 238
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.9e-35 Score=300.93 Aligned_cols=250 Identities=25% Similarity=0.356 Sum_probs=202.8
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC-CcceEEEe
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLET-EVPLLVYE 466 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~E 466 (700)
+|++.+.||+|++|.||++... +++.||+|++... .....+.+.+|++++++++|+|++++++.+... ...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4888999999999999999976 5788999987643 334556789999999999999999999987644 45789999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++.... ...+++.+++.++.|++.||++||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999998643 234899999999999999999999999 9999999999999999999999999987653222
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.......+++.|+|||++.+..++.++||||||+++++|++|+.||...+.... . ..+..+..
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~------~-~~~~~~~~--------- 219 (257)
T cd08223 157 -DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL------V-YRIIEGKL--------- 219 (257)
T ss_pred -CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH------H-HHHHhcCC---------
Confidence 223344588999999999999999999999999999999999999975432211 1 11111111
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+......+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11223455678999999999999999999999863
No 239
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-35 Score=320.10 Aligned_cols=263 Identities=23% Similarity=0.310 Sum_probs=199.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC------
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLET------ 458 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 458 (700)
..++|++.+.||+|+||.||++... .++.||||++... .......+.+|+.+++.++|+||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999975 5889999988642 334456788999999999999999999987543
Q ss_pred CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCC
Q 005355 459 EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGA 538 (700)
Q Consensus 459 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl 538 (700)
...++||||++ ++|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence 34689999996 477777753 2788999999999999999999999 99999999999999999999999999
Q ss_pred CcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHH--------HHH
Q 005355 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY--------FLE 610 (700)
Q Consensus 539 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~--------~~~ 610 (700)
++..... .......+|..|+|||++.+..++.++||||||+++|+|++|+.||...+..+....... +..
T Consensus 173 a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 173 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred ccccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 9754321 222345689999999999999999999999999999999999999986654322111100 000
Q ss_pred H--------HHhcc-h-----hhhcchhh---hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 611 A--------MKENR-L-----FEVLDARV---LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 611 ~--------~~~~~-~-----~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
. ..... . ........ ..+........+.+|+.+||+.||.+|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 00000 0 00000000 000111123568899999999999999999999884
No 240
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.3e-35 Score=305.49 Aligned_cols=253 Identities=26% Similarity=0.379 Sum_probs=203.2
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
.++|++.+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++++||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 457888899999999999999965 6889999998766555667788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++.... .+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 88 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~ 160 (267)
T cd06645 88 CGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITAT-I 160 (267)
T ss_pred cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCc-c
Confidence 99999999987553 3899999999999999999999999 999999999999999999999999998755322 1
Q ss_pred eeeeeeecccccccccccc---cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 548 HLTTRVQGTFGYLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
.......|+..|+|||++. ...++.++||||||+++|+|++|..||......... . ........ .+.
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~------~-~~~~~~~~---~~~ 230 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------F-LMTKSNFQ---PPK 230 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH------H-hhhccCCC---CCc
Confidence 1223346889999999974 456889999999999999999999998654322210 0 01111110 000
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
... ....+..+.+++.+||+.+|++||+++++++
T Consensus 231 ~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 231 LKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 000 1123456889999999999999999999876
No 241
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-35 Score=321.18 Aligned_cols=262 Identities=23% Similarity=0.300 Sum_probs=201.4
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc---CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT---NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
...+|++.+.||+|+||.||++... .++.||+|.+... ..+.+|++++++++|+||+++++.+......+++
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 3567999999999999999999754 3578999987642 2356899999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
||++. ++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 165 ~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 165 MPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred ehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 99995 6898888443 24899999999999999999999999 99999999999999999999999999976543
Q ss_pred CCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchh-----
Q 005355 545 DQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF----- 618 (700)
Q Consensus 545 ~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 618 (700)
.... ......||+.|+|||++....++.++||||||+++|||++|+.||.........................
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 317 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG 317 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence 3221 2234569999999999999999999999999999999999999997665433222222222111110000
Q ss_pred -----hh---cchhhhhcc-------CHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 619 -----EV---LDARVLKEA-------KEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 619 -----~~---~d~~~~~~~-------~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.. ......... ......++.+++++||+.+|++|||+.|++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000000000 01123467889999999999999999999874
No 242
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.7e-35 Score=306.18 Aligned_cols=264 Identities=25% Similarity=0.336 Sum_probs=201.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++|+..+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.++++++|+|++++++.+......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46889999999999999999986 58999999876432 2234568899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|..++.... .+++..++.++.||+.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 999988888776543 3899999999999999999999999 9999999999999999999999999998654322
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHH--------HHhcch
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA--------MKENRL 617 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~ 617 (700)
. ......++..|+|||++.+ ..++.++||||||+++|+|++|..||......+........... .....+
T Consensus 155 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 155 D-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred c-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 1 1223347789999999876 56789999999999999999999999865543321111100000 000000
Q ss_pred h---hhcchhh---hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 F---EVLDARV---LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ~---~~~d~~~---~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
. ...++.. ........+..+.+|+.+||+.+|++||++.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0 0000000 00001123567889999999999999999999875
No 243
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-35 Score=307.53 Aligned_cols=259 Identities=27% Similarity=0.402 Sum_probs=207.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.++|++.+.||+|+||+||++... +++.||+|+..... ....+.+.+|+++++.++|+||+++++.+...+..++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 467888899999999999999975 58899999876532 3446789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
|+++++|.+++.... .+++..+..++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 84 FMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred cCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999987643 38999999999999999999997 47 999999999999999999999999998654221
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhh-----hHHHHHHHHHHhcchhhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK-----SLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 620 (700)
. .....++..|+|||++.+..++.++||||||+++|+|++|..||......++. .....+...+...
T Consensus 158 ~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 229 (284)
T cd06620 158 I---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP----- 229 (284)
T ss_pred c---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-----
Confidence 1 22346889999999998889999999999999999999999999865543211 1111111111100
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.........+..+.+|+.+||+.+|++||++.|++++.--+
T Consensus 230 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 230 ----PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred ----CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 00000112456788999999999999999999999874333
No 244
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.1e-35 Score=311.96 Aligned_cols=197 Identities=25% Similarity=0.402 Sum_probs=161.2
Q ss_pred cceEeeeCCeEEEEEEEc---CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe--CCcceEEEeeCC
Q 005355 395 NRILGQGGQGTVYKGMLT---NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE--TEVPLLVYEFIP 469 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E~~~ 469 (700)
.++||+|+||.||+|... +++.||+|.+.... ....+.+|++++++++||||+++++.+.. ....++++||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999965 46789999876432 23457889999999999999999999864 345689999985
Q ss_pred CCCHHHHHhccC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEE----CCCCcEEEeecCCC
Q 005355 470 NGTLYQYIHDQT------EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILL----DDKYRAKVSDFGAS 539 (700)
Q Consensus 470 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl----~~~~~~kl~DfGl~ 539 (700)
++|.+++.... ....+++..+..++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 58888876431 1234899999999999999999999999 9999999999999 45678999999999
Q ss_pred cccccCCce--eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCC
Q 005355 540 RSVMIDQTH--LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597 (700)
Q Consensus 540 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~ 597 (700)
+........ ......+|+.|+|||++.+ ..++.++||||||+++|||++|++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 865432211 2234568999999999877 458999999999999999999999997544
No 245
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-35 Score=302.28 Aligned_cols=247 Identities=28% Similarity=0.481 Sum_probs=200.7
Q ss_pred cCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
++|++.+.||+|+||.||++.. .++.||+|+.+... ..+.+.+|+.++++++|+|++++++.+... ..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 5688899999999999999986 57889999886532 346789999999999999999999998654 5799999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+++|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~---- 153 (254)
T cd05083 82 KGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG---- 153 (254)
T ss_pred CCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc----
Confidence 9999999976532 24899999999999999999999999 999999999999999999999999998754221
Q ss_pred eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
......+..|+|||++.+..++.++||||||+++|||++ |..||......+. ......+.. ..
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-------~~~~~~~~~---------~~ 217 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV-------KECVEKGYR---------ME 217 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH-------HHHHhCCCC---------CC
Confidence 112234567999999998899999999999999999998 9999976543321 112221111 11
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
.....+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 122345678899999999999999999999998863
No 246
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.6e-35 Score=300.44 Aligned_cols=238 Identities=25% Similarity=0.455 Sum_probs=191.9
Q ss_pred ceEeeeCCeEEEEEEEcCCc-----------EEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 396 RILGQGGQGTVYKGMLTNGR-----------IVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
+.||+|+||.||+|.+.+.. .+++|.+...... ...+.+|+.++++++|+||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999986432 5788876654433 6789999999999999999999999988 778999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC-------cEEEeecC
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-------RAKVSDFG 537 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~-------~~kl~DfG 537 (700)
+||+++++|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++ .+||+|||
T Consensus 79 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCC
Confidence 999999999999987543 4899999999999999999999999 99999999999999887 79999999
Q ss_pred CCcccccCCceeeeeeecccccccccccccC--CCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHh
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS--QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKE 614 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 614 (700)
++..... .....++..|+|||++... .++.++||||||+++|||++ |..||......+.... ...
T Consensus 154 ~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~-------~~~ 221 (259)
T cd05037 154 IPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERF-------YQD 221 (259)
T ss_pred ccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHH-------Hhc
Confidence 9876432 2223467789999999876 78999999999999999999 5777765543221110 110
Q ss_pred cchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 615 NRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 615 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
.... +......+.+++.+||..+|.+||++.++++.|+
T Consensus 222 ~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 QHRL-----------PMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CCCC-----------CCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 0011167889999999999999999999999874
No 247
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=9.7e-36 Score=308.27 Aligned_cols=248 Identities=28% Similarity=0.420 Sum_probs=202.3
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+.|+..+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|++++++++|+||+++++.+...+..++|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 34666788999999999999875 57889999876433 34557889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++... .+++..+..++.|+++||.|||+++ ++|+||+|+||++++++.+||+|||++........
T Consensus 84 ~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 84 LGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred cCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 9999999998653 3899999999999999999999999 99999999999999999999999999876532221
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......++..|+|||++.+..++.++||||||+++|||++|..||........ ........ ..
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-------~~~~~~~~---------~~ 219 (277)
T cd06642 157 -KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-------LFLIPKNS---------PP 219 (277)
T ss_pred -hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-------HhhhhcCC---------CC
Confidence 12234578899999999999999999999999999999999999864432221 11111111 01
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
......+..+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 220 TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1122345678899999999999999999999983
No 248
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.2e-35 Score=303.99 Aligned_cols=250 Identities=29% Similarity=0.467 Sum_probs=198.9
Q ss_pred ceEeeeCCeEEEEEEEcC-------CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 396 RILGQGGQGTVYKGMLTN-------GRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+.||+|+||.||+|++.+ ++.+|||.+.... ......+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 469999999999998652 2578999875432 34467889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC-----cEEEeecCC
Q 005355 468 IPNGTLYQYIHDQT----EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-----RAKVSDFGA 538 (700)
Q Consensus 468 ~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~-----~~kl~DfGl 538 (700)
+++++|.+++.... ....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.+. .+||+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997542 1234789999999999999999999999 99999999999999877 899999999
Q ss_pred CcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcc
Q 005355 539 SRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENR 616 (700)
Q Consensus 539 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 616 (700)
+......... ......++..|+|||++.+..++.++||||||+++|||++ |..||......+. ...+..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~-------~~~~~~~~ 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV-------LQHVTAGG 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH-------HHHHhcCC
Confidence 8755322211 1122335678999999999999999999999999999998 9999975433221 11111111
Q ss_pred hhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 617 LFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 617 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
. ...+...+..+.+++.+||+.+|.+||++.++++.|++
T Consensus 231 ~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 R---------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred c---------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 01122345678899999999999999999999999863
No 249
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.1e-35 Score=311.16 Aligned_cols=262 Identities=20% Similarity=0.280 Sum_probs=198.2
Q ss_pred ccceEeee--CCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 394 TNRILGQG--GQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 394 ~~~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
++++||+| +|++||++..+ +++.||||++... .....+.+.+|+++++.++||||+++++++...+..++|+||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 46789999 68999999975 6899999998753 2334567788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
++++|.+++..... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+++.||+...........
T Consensus 82 ~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 99999999975432 23899999999999999999999999 999999999999999999999999865433211110
Q ss_pred ------eeeeeeccccccccccccc--CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 549 ------LTTRVQGTFGYLDPEYFRS--SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 549 ------~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||........ . .... .+.....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~----~~~~-~~~~~~~ 230 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--L----LEKL-NGTVPCL 230 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--H----HHHh-cCCcccc
Confidence 1112346778999999976 4688999999999999999999999975432211 0 0000 0000000
Q ss_pred cch------------------------------------hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH--HH
Q 005355 621 LDA------------------------------------RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF--EL 662 (700)
Q Consensus 621 ~d~------------------------------------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~--~L 662 (700)
++. ...........+.+.+|+.+||+.||++|||++|+++ .+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f 310 (327)
T cd08227 231 LDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 310 (327)
T ss_pred ccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhh
Confidence 000 0000112234567889999999999999999999987 34
Q ss_pred Hhch
Q 005355 663 GGIR 666 (700)
Q Consensus 663 ~~l~ 666 (700)
++++
T Consensus 311 ~~~~ 314 (327)
T cd08227 311 KQIK 314 (327)
T ss_pred hhcc
Confidence 4443
No 250
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1e-35 Score=304.74 Aligned_cols=240 Identities=24% Similarity=0.423 Sum_probs=192.3
Q ss_pred ceEeeeCCeEEEEEEEcC--------CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 396 RILGQGGQGTVYKGMLTN--------GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+.||+|+||.||+|.... ...|++|.+........+.+.+|+.+++.++|+|++++++.+...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998642 234888887665555667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCc--------EEEeecCCC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR--------AKVSDFGAS 539 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~--------~kl~DfGl~ 539 (700)
+++|+|.++++.... .+++..++.++.||+.||+|||+.+ |+||||||+|||++.++. ++++|||++
T Consensus 81 ~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 81 VKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred CCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence 999999999986543 3899999999999999999999999 999999999999987665 699999988
Q ss_pred cccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCC-CCCCCCCchhhhhHHHHHHHHHHhcch
Q 005355 540 RSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQ-KPIRSTDSEEDKSLVGYFLEAMKENRL 617 (700)
Q Consensus 540 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (700)
..... .....++..|+|||++.+ ..++.++||||||+++|||++|. .|+......... ..... .
T Consensus 156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-------~~~~~-~- 221 (258)
T cd05078 156 ITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-------QFYED-R- 221 (258)
T ss_pred cccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-------HHHHc-c-
Confidence 65432 122457889999999987 45799999999999999999985 565433322110 00110 0
Q ss_pred hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 618 FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 618 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
...+......+.+|+.+||+.+|++|||++++++.|+
T Consensus 222 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 ---------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ---------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0112223356889999999999999999999999874
No 251
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.8e-35 Score=310.40 Aligned_cols=258 Identities=28% Similarity=0.510 Sum_probs=203.9
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCc----EEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGR----IVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
.++|+..+.||+|+||.||+|.+. +++ .||+|.+.... ......+.+|+.+++.++|+||+++++.+... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 456788899999999999999864 343 57889876533 33345788999999999999999999998754 467
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+++||+++|+|.+++..... .+++..++.++.|++.||+|||+++ |+|+||||+|||++.++.+||+|||+++..
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eeehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccc
Confidence 99999999999999976533 3899999999999999999999999 999999999999999999999999999865
Q ss_pred ccCCcee-eeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 543 MIDQTHL-TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 543 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
....... .....++..|+|||++.+..++.++||||||+++|||++ |..||......+. ...+..+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-------~~~~~~~~~~-- 230 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-------PDLLEKGERL-- 230 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-------HHHHHCCCCC--
Confidence 4322211 122335678999999999999999999999999999997 8999975543221 1111111110
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
..+......+.+++.+||..+|++||++++++++|+.+...
T Consensus 231 -------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 231 -------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 01112345688999999999999999999999999987543
No 252
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.2e-35 Score=300.37 Aligned_cols=249 Identities=25% Similarity=0.424 Sum_probs=197.1
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-----ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--Ccc
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-----DESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVP 461 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 461 (700)
.+|+..+.||+|+||.||+|... .++.|++|++... .....+.+.+|+.++++++|+||+++++.+.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47899999999999999999975 5889999987532 123456788999999999999999999988753 567
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++++||+++++|.+++.... .+++...+.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999997643 3889999999999999999999999 99999999999999999999999999876
Q ss_pred cccCCc--eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 542 VMIDQT--HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 542 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
...... .......++..|+|||++.+..++.++||||||+++|||++|+.||......+. ........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~------~~~~~~~~---- 225 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA------IFKIATQP---- 225 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH------HHHHhcCC----
Confidence 532211 111234578899999999999999999999999999999999999975432221 11111100
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.. ...+......+.+++ +||..+|++||+++|+++
T Consensus 226 -~~----~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 226 -TN----PQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -CC----CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 01 112233345566777 678889999999999975
No 253
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=6.8e-35 Score=299.83 Aligned_cols=249 Identities=25% Similarity=0.395 Sum_probs=198.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-----ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--Ccc
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-----DESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVP 461 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 461 (700)
.+|++.++||+|+||.||++... +++.||||.+... .....+.+.+|+.++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57889999999999999999975 5889999986532 123456788999999999999999999998764 456
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++++||+++++|.+++.... .+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence 79999999999999997653 3788999999999999999999999 99999999999999999999999999875
Q ss_pred cccCCc--eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 542 VMIDQT--HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 542 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
...... .......++..|+|||++.+..++.++||||||+++|||++|+.||........ ........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~---- 225 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA------IFKIATQP---- 225 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH------HHHHhcCC----
Confidence 532111 112234588899999999988899999999999999999999999965422211 11111100
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.....+......+.+++.+|+. +|++||+++|+++
T Consensus 226 -----~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 -----TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -----CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0112234455678889999995 9999999999986
No 254
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.5e-35 Score=302.61 Aligned_cols=253 Identities=26% Similarity=0.387 Sum_probs=203.1
Q ss_pred CCCccceEeeeCCeEEEEEEEcC--CcEEEEEEcccc----------ChhhHHHHHHHHHHHhh-cCCCceeeEEeEEEe
Q 005355 391 NFNTNRILGQGGQGTVYKGMLTN--GRIVAIKKSKLV----------DESNIEQFINEVAILSQ-INHRNVVKLLGCCLE 457 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 457 (700)
+|++.+.||+|+||.||++.+.. ++.+|+|.+... ......++.+|+.++.+ ++|+||+++++.+.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999764 688999976532 22345667889998875 799999999999999
Q ss_pred CCcceEEEeeCCCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEECCCCcEEEee
Q 005355 458 TEVPLLVYEFIPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLDDKYRAKVSD 535 (700)
Q Consensus 458 ~~~~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~~~~~~kl~D 535 (700)
.+..+++|||+++++|.+++... .....+++..++.++.|++.||.|||+ .+ ++|+||+|+|||++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999998653 223358999999999999999999996 66 99999999999999999999999
Q ss_pred cCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc
Q 005355 536 FGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN 615 (700)
Q Consensus 536 fGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 615 (700)
||++....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||........ .......
T Consensus 158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~-------~~~~~~~ 228 (269)
T cd08528 158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL-------ATKIVEA 228 (269)
T ss_pred ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH-------HHHHhhc
Confidence 99997653322 23345688899999999988899999999999999999999999965432211 1111111
Q ss_pred chhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 616 RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 616 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
..... ........+.+++.+||+.||++||++.|+.++|+
T Consensus 229 ~~~~~--------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 VYEPL--------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCcC--------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11110 01123457889999999999999999999999885
No 255
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=7.8e-35 Score=300.09 Aligned_cols=253 Identities=25% Similarity=0.349 Sum_probs=191.7
Q ss_pred ceEeeeCCeEEEEEEEcC---CcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 396 RILGQGGQGTVYKGMLTN---GRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
+.||+|+||.||+|.... ...+++|.+.... ......+.+|+++++.++|+||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999997543 3578888766432 334567889999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce-
Q 005355 472 TLYQYIHDQTEE--FPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH- 548 (700)
Q Consensus 472 sL~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~- 548 (700)
+|.+++...... ...++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999999775431 23567888999999999999999999 999999999999999999999999998654322211
Q ss_pred eeeeeeccccccccccccc-------CCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 549 LTTRVQGTFGYLDPEYFRS-------SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~-------~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
......++..|+|||++.. ..++.++||||||+++|||++ |..||......+. ........ ...+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~------~~~~~~~~-~~~~ 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV------LKQVVREQ-DIKL 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH------HHHHhhcc-CccC
Confidence 1122345678999998743 456889999999999999999 7888865433221 11111111 1111
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
..+.+ ....+..+.+++..|+ .+|++||+++||++.|.
T Consensus 231 ~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 12211 2233455677888888 59999999999999873
No 256
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.6e-35 Score=316.44 Aligned_cols=259 Identities=22% Similarity=0.303 Sum_probs=196.5
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC------
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLET------ 458 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 458 (700)
..++|++.+.||+|+||.||++... +++.||||++.... ....+.+.+|++++++++|+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 4678999999999999999999965 67899999876432 23446678999999999999999999987543
Q ss_pred CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCC
Q 005355 459 EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGA 538 (700)
Q Consensus 459 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl 538 (700)
...++++|++ +++|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence 3458999988 78998888643 3899999999999999999999999 99999999999999999999999999
Q ss_pred CcccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc--
Q 005355 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN-- 615 (700)
Q Consensus 539 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 615 (700)
+...... .....+++.|+|||++.+ ..++.++||||||+++|+|++|+.||...+..+. ...........
T Consensus 165 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~ 237 (343)
T cd07878 165 ARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ---LKRIMEVVGTPSP 237 (343)
T ss_pred ceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH---HHHHHHHhCCCCH
Confidence 9764322 223458999999999877 5689999999999999999999999976543221 11111000000
Q ss_pred ---------chhhhcc------hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 616 ---------RLFEVLD------ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 616 ---------~~~~~~d------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.....+. ............+.+.+|+.+||+.||.+|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 238 EVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 000000001122357899999999999999999999964
No 257
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.1e-35 Score=305.71 Aligned_cols=262 Identities=24% Similarity=0.321 Sum_probs=204.3
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|++.+.||+|+||.||+|.+. +++.|++|++.... ....+.+.+|+.++++++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999975 68999999877543 33457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+ +++|.+++.... .++++..++.++.||++||+|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999997654 34899999999999999999999999 99999999999999999999999999986644332
Q ss_pred eeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc-----------
Q 005355 548 HLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN----------- 615 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 615 (700)
.......++..|+|||++.+. .++.++||||||++++||++|.+||......+. ...........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ---LAIVFRTLGTPNEETWPGLTSL 231 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH---HHHHHHHcCCCChHHHhhccCc
Confidence 223345688999999998654 468999999999999999999888865443221 11111111000
Q ss_pred -chhhh----cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 616 -RLFEV----LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 616 -~~~~~----~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.+..+ ...........+....+.+|+.+||+.+|++||+++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 00000011112334788999999999999999999999863
No 258
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.8e-35 Score=299.21 Aligned_cols=247 Identities=26% Similarity=0.432 Sum_probs=202.5
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-----hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-----ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
+|+..+.||+|+||.||+|... +++.|++|.+.... ....+.+.+|+++++.++|+||+++++.+.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4778899999999999999976 78999999876433 33557899999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
+||+++++|.+++.... .+++..+..++.||++||+|||+.+ ++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997653 3889999999999999999999999 99999999999999999999999999876533
Q ss_pred CCceeeeeeecccccccccccccCC-CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|..||......+. ..........
T Consensus 155 ~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~------~~~~~~~~~~------ 220 (258)
T cd06632 155 FS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA------VFKIGRSKEL------ 220 (258)
T ss_pred cc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH------HHHHHhcccC------
Confidence 22 233455888999999987776 89999999999999999999999975442111 1111110111
Q ss_pred hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 624 RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 624 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...+......+.+++++||+.+|.+||++++++.
T Consensus 221 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 ---PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ---CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1112234567888999999999999999999985
No 259
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.4e-35 Score=299.94 Aligned_cols=256 Identities=27% Similarity=0.412 Sum_probs=207.3
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
++|++.+.||.|+||+||+|... ++..+++|++.... ....+.+.+|+++++.++|+|++++++.+...+..++++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47899999999999999999965 67899999876432 33567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++........+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999986543345899999999999999999999999 99999999999999999999999999876654332
Q ss_pred e---eeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 548 H---LTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 548 ~---~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
. ......++..|+|||++... .++.++|+||||+++|+|++|+.||......+. +....... .+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~------~~~~~~~~------~~ 225 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV------LMLTLQND------PP 225 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh------HHHHhcCC------CC
Confidence 2 22334588999999998877 789999999999999999999999975543221 11111110 00
Q ss_pred hhhhcc-CHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 624 RVLKEA-KEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 624 ~~~~~~-~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...... ....+..+.+++.+||+.+|++||+++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 010110 1234567889999999999999999999986
No 260
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.8e-35 Score=299.18 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=204.4
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|++.+.||+|+||.+|++... +++.||+|.+... .....+.+.+|+.++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5788999999999999999965 6889999987642 334456889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++..... ..+++..++.++.|++.||+|||+++ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999999999976432 23789999999999999999999999 99999999999999999999999999975533221
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......+++.|+|||++.+..++.++|+||||+++++|++|..||......+ ...... .+.. .
T Consensus 157 -~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~-~~~~---------~ 219 (256)
T cd08218 157 -LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN------LVLKII-RGSY---------P 219 (256)
T ss_pred -hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH------HHHHHh-cCCC---------C
Confidence 1223457889999999999999999999999999999999999987543222 111111 1111 1
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..+......+.+++.+||+.+|.+||++.+|++.
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 220 PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1123345678999999999999999999999873
No 261
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.7e-35 Score=304.73 Aligned_cols=259 Identities=23% Similarity=0.354 Sum_probs=204.0
Q ss_pred chHHHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEe-
Q 005355 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCLE- 457 (700)
Q Consensus 381 ~~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 457 (700)
+..++..+.+.|++.+.||+|+||.||+|.+. +++.+|+|...... .....+..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44566667889999999999999999999975 67899999876543 3346788999999998 79999999999853
Q ss_pred -----CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEE
Q 005355 458 -----TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAK 532 (700)
Q Consensus 458 -----~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~k 532 (700)
.+..+++|||+++++|.+++..... ..+++..+..++.||+.||+|||+.+ |+|+||+|+||++++++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEE
Confidence 4567899999999999999976432 24888899999999999999999999 99999999999999999999
Q ss_pred EeecCCCcccccCCceeeeeeecccccccccccc-----cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHH
Q 005355 533 VSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFR-----SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY 607 (700)
Q Consensus 533 l~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 607 (700)
|+|||++........ ......++..|+|||.+. ...++.++||||||+++|||++|..||......+..
T Consensus 162 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----- 235 (282)
T cd06636 162 LVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----- 235 (282)
T ss_pred EeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh-----
Confidence 999999875432211 123345888999999985 346788999999999999999999999654322111
Q ss_pred HHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 608 FLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 608 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..... .. .........+..+.+|+.+||+.+|.+||++.|+++
T Consensus 236 -~~~~~-~~--------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 -FLIPR-NP--------PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred -hhHhh-CC--------CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 00000 00 001111234567899999999999999999999875
No 262
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.7e-35 Score=306.49 Aligned_cols=265 Identities=26% Similarity=0.326 Sum_probs=204.5
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++|++.+.||+|+||.||+|.+. +++.|+||+++.. .....+.+.+|++++++++|+||+++++++...+..++++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 46889999999999999999976 5789999987643 33345788999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|++++.|..++.... .+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEASPG---GLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 999877766554432 3899999999999999999999999 9999999999999999999999999988765443
Q ss_pred ceeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHH--------HHHh-c-
Q 005355 547 THLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLE--------AMKE-N- 615 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~--------~~~~-~- 615 (700)
........++..|+|||++.+. .++.++||||||+++|+|++|+.||......+.......... .... .
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 3233345678899999999888 889999999999999999999999975543221111000000 0000 0
Q ss_pred ----chhhhcchhh-hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 616 ----RLFEVLDARV-LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 616 ----~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
......+... ....+...+..+.+|+++||..+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000111100 11112223677999999999999999999999875
No 263
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=295.20 Aligned_cols=268 Identities=23% Similarity=0.386 Sum_probs=224.3
Q ss_pred HHHHHHhcCCCccceEeeeCCeEEEEEEEcC------CcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCceeeEEeEE
Q 005355 383 MELEMATDNFNTNRILGQGGQGTVYKGMLTN------GRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKLLGCC 455 (700)
Q Consensus 383 ~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~------~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 455 (700)
.++.....+++...++-+|.||.||+|.|.+ .+.|.+|..+. .++-+...++.|.-++..+.|||++.+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 4556667788999999999999999998763 34677887664 4556678899999999999999999999998
Q ss_pred EeC-CcceEEEeeCCCCCHHHHHh-----ccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC
Q 005355 456 LET-EVPLLVYEFIPNGTLYQYIH-----DQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY 529 (700)
Q Consensus 456 ~~~-~~~~lv~E~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~ 529 (700)
.++ +.++.+|.++.-|+|+.+|. +....+.++..++..++.|++.|++|||+++ +||.||..+|.+||+..
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhhe
Confidence 754 67899999999999999998 4444456888899999999999999999999 99999999999999999
Q ss_pred cEEEeecCCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHH
Q 005355 530 RAKVSDFGASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGY 607 (700)
Q Consensus 530 ~~kl~DfGl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~ 607 (700)
++||+|-.+++.+.+.+.+ .......+..||+||.+.+..|+.++|||||||+||||++ |+.|+...++.|..
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~----- 508 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME----- 508 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH-----
Confidence 9999999999988766554 3344557789999999999999999999999999999999 99999888776632
Q ss_pred HHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhc
Q 005355 608 FLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669 (700)
Q Consensus 608 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~ 669 (700)
..++.+ ..-..+.+.++++..++.-||...|++||++++++.-|...-..+
T Consensus 509 --~ylkdG---------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 509 --HYLKDG---------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred --HHHhcc---------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 122222 112335567889999999999999999999999999998776544
No 264
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3e-35 Score=305.97 Aligned_cols=262 Identities=24% Similarity=0.321 Sum_probs=203.8
Q ss_pred chHHHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEE--
Q 005355 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCL-- 456 (700)
Q Consensus 381 ~~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-- 456 (700)
....+..+.++|++.+.||+|+||.||++... .++.+|+|+...... ....+.+|+.+++.+ +|+||+++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 34556677899999999999999999999975 578999998764322 235678899999999 6999999999874
Q ss_pred ---eCCcceEEEeeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEE
Q 005355 457 ---ETEVPLLVYEFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAK 532 (700)
Q Consensus 457 ---~~~~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~k 532 (700)
..+..++||||+++++|.+++.... ....+++..+..++.|+++||.|||+.+ ++||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEE
Confidence 3456799999999999999886432 2335889999999999999999999999 99999999999999999999
Q ss_pred EeecCCCcccccCCceeeeeeeccccccccccccc-----CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHH
Q 005355 533 VSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS-----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY 607 (700)
Q Consensus 533 l~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~ 607 (700)
|+|||++....... .......+++.|+|||++.. ..++.++||||||+++|||++|+.||......+.
T Consensus 165 l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~------ 237 (286)
T cd06638 165 LVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA------ 237 (286)
T ss_pred EccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH------
Confidence 99999987653222 12233458999999999853 4578899999999999999999999975432211
Q ss_pred HHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 608 FLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 608 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
... ..........+ +......+.+|+.+||+.+|++|||++|+++.
T Consensus 238 ~~~-~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 238 LFK-IPRNPPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred Hhh-ccccCCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 000 00010000101 11123468899999999999999999999875
No 265
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=7.5e-35 Score=303.87 Aligned_cols=264 Identities=24% Similarity=0.332 Sum_probs=206.4
Q ss_pred ccchHHHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEE
Q 005355 379 LFTSMELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCL 456 (700)
Q Consensus 379 ~~~~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 456 (700)
+++..++..+.++|++.+.||+|+||.||++... +++.+|+|....... ..+.+.+|+.+++++ +|+|++++++++.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 3455666677899999999999999999999975 688999998765332 236678899999998 8999999999987
Q ss_pred eCC-----cceEEEeeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCc
Q 005355 457 ETE-----VPLLVYEFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR 530 (700)
Q Consensus 457 ~~~-----~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~ 530 (700)
..+ ..++|+||+++++|.++++... ....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCC
Confidence 543 5789999999999999987532 2235899999999999999999999999 999999999999999999
Q ss_pred EEEeecCCCcccccCCceeeeeeecccccccccccccC-----CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHH
Q 005355 531 AKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS-----QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605 (700)
Q Consensus 531 ~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~ 605 (700)
+||+|||++........ ......++..|+|||++... .++.++||||||+++|||++|+.||......+.
T Consensus 167 ~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~---- 241 (291)
T cd06639 167 VKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT---- 241 (291)
T ss_pred EEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH----
Confidence 99999999876532221 12234578899999998653 368899999999999999999999975433221
Q ss_pred HHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 606 GYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 606 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.. .+.......+.+ +......+.+|+.+||+.+|++||++.|+++.
T Consensus 242 --~~-~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 242 --LF-KIPRNPPPTLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred --HH-HHhcCCCCCCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11 111111111111 12334568899999999999999999999863
No 266
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=7e-35 Score=307.91 Aligned_cols=252 Identities=25% Similarity=0.374 Sum_probs=202.7
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh---hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE---SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|+..+.||+|+||.||++... +++.||+|.+..... ...+.+.+|+++++.++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 46888999999999999999976 489999998765332 34567899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+.+++|.+++.... ...+++..+..++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987543 234899999999999999999999999 999999999999999999999999998754321
Q ss_pred Cce----------------------------eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCC
Q 005355 546 QTH----------------------------LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597 (700)
Q Consensus 546 ~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~ 597 (700)
... ......|+..|+|||++.+..++.++||||||+++|+|++|..||...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 110 1112357889999999999999999999999999999999999997554
Q ss_pred chhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC----HHHHHH
Q 005355 598 SEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT----MKEAAF 660 (700)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs----~~evl~ 660 (700)
..+. +..... .. .........+..+.+++.+||+.+|++||+ ++|+++
T Consensus 237 ~~~~------~~~~~~-~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RDET------FSNILK-KE--------VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hHHH------HHHHhc-CC--------ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 3221 111111 11 101111124668999999999999999999 556555
No 267
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-35 Score=338.84 Aligned_cols=257 Identities=23% Similarity=0.390 Sum_probs=201.0
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--Cc
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLET--EV 460 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 460 (700)
+...++|++++.||+|+||+||++.+. .++.||+|.+.. ........|..|+.++++++||||+++++++.+. ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 344678999999999999999999976 577899998764 2344567899999999999999999999988654 46
Q ss_pred ceEEEeeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCeeecCCCCCcEEECC--------
Q 005355 461 PLLVYEFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAAS----IPIYHRDIKSANILLDD-------- 527 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~----~~ivH~Dik~~NILl~~-------- 527 (700)
.+|||||+++++|.++|.... ....+++..++.|+.||+.||+|||+.+. ..|+||||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 789999999999999997632 22359999999999999999999998541 23999999999999964
Q ss_pred ---------CCcEEEeecCCCcccccCCceeeeeeeccccccccccccc--CCCCcccceehHHHHHHHHHhCCCCCCCC
Q 005355 528 ---------KYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS--SQFTEKSDVYSFGVVLVELLTGQKPIRST 596 (700)
Q Consensus 528 ---------~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlG~il~elltg~~p~~~~ 596 (700)
.+.+||+|||++...... .......||+.|+|||++.. ..++.++||||||+|||||++|..||...
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 335899999999765322 22234568999999999854 45889999999999999999999999754
Q ss_pred CchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 597 DSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.... .+...+..... + .....+..+.+||.+||+.+|.+||++.+++.
T Consensus 247 ~~~~------qli~~lk~~p~-------l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 NNFS------QLISELKRGPD-------L---PIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CcHH------HHHHHHhcCCC-------C---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 3221 11111211110 0 01123457889999999999999999999984
No 268
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.9e-35 Score=307.46 Aligned_cols=264 Identities=25% Similarity=0.344 Sum_probs=201.4
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++|++.++||+|+||.||++.++ +++.||+|++.... ....+.+.+|+++++.++|+||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999986 58899999865432 2235678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.++..... .+++..++.++.||++||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 999999988776543 3899999999999999999999999 9999999999999999999999999987653332
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--------HHHHHhcch
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF--------LEAMKENRL 617 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~ 617 (700)
.......++..|+|||++.+ ..++.++||||||+++|||++|.+||......+........ .........
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 155 -EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred -cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 22233457889999999875 45788999999999999999999999755432211000000 000000000
Q ss_pred ------hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 ------FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ------~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
................+..+.+|+.+||+.+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000000000111234567999999999999999999999876
No 269
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.2e-35 Score=315.58 Aligned_cols=240 Identities=25% Similarity=0.302 Sum_probs=188.7
Q ss_pred EeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc---CCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 398 LGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI---NHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
||+|+||+||+|+.. +++.||||++... .......+..|..++... +||||+++++.+.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999976 5899999987642 122334556677777665 699999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++....... ...
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~ 153 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTT 153 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCc
Confidence 99999987643 3899999999999999999999999 9999999999999999999999999987532222 223
Q ss_pred eeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhcc
Q 005355 551 TRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEA 629 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 629 (700)
....||..|+|||++.+. .++.++||||||+++|+|++|..||......+ ....+..+... +.
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~-------~~~~i~~~~~~------~~--- 217 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ-------MYRNIAFGKVR------FP--- 217 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH-------HHHHHHcCCCC------CC---
Confidence 345689999999998764 48999999999999999999999997654322 11112111110 00
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCCC----HHHHHH
Q 005355 630 KEEEIITVAMLAKRCLNMIGKKRPT----MKEAAF 660 (700)
Q Consensus 630 ~~~~~~~l~~li~~cl~~~p~~RPs----~~evl~ 660 (700)
.......+.+++.+||+.+|.+||+ +.++++
T Consensus 218 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0123456788999999999999984 556555
No 270
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.4e-35 Score=307.73 Aligned_cols=249 Identities=26% Similarity=0.398 Sum_probs=202.4
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
.|.....||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 3444467999999999999975 688999999876666667789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+++|.+++... .+++..+..++.||+.||+|||+++ |+||||||+||++++++.+||+|||++........ .
T Consensus 103 ~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~ 174 (292)
T cd06658 103 GGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-K 174 (292)
T ss_pred CCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-c
Confidence 99999998643 2889999999999999999999999 99999999999999999999999999875432221 2
Q ss_pred eeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhcc
Q 005355 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEA 629 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 629 (700)
.....++..|+|||++.+..++.++||||||++++||++|..||......+. ...+.. .+...+..
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-------~~~~~~-----~~~~~~~~-- 240 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-------MRRIRD-----NLPPRVKD-- 240 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHh-----cCCCcccc--
Confidence 2335688999999999988999999999999999999999999975443221 011111 11111111
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 630 KEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 630 ~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.......+.+++.+||..+|.+|||++|+++.
T Consensus 241 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11234568889999999999999999999974
No 271
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7.6e-35 Score=300.70 Aligned_cols=255 Identities=27% Similarity=0.465 Sum_probs=200.8
Q ss_pred CCccceEeeeCCeEEEEEEEc----CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC------
Q 005355 392 FNTNRILGQGGQGTVYKGMLT----NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETE------ 459 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 459 (700)
|.+.+.||+|+||.||+|.+. .++.||||++... .....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999864 3678999987643 3445678899999999999999999999886542
Q ss_pred cceEEEeeCCCCCHHHHHhccC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeec
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQT---EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDF 536 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~Df 536 (700)
..++++||+.+|+|.+++.... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 2368899999999999875432 2234789999999999999999999999 999999999999999999999999
Q ss_pred CCCcccccCCce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHh
Q 005355 537 GASRSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKE 614 (700)
Q Consensus 537 Gl~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 614 (700)
|+++........ ......+++.|++||.+....++.++||||||+++|||++ |+.||......+. ...+..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~-------~~~~~~ 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI-------YNYLIK 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH-------HHHHHc
Confidence 998865432211 1122335678999999998899999999999999999999 8899875443221 111111
Q ss_pred cchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 615 NRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 615 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.... ..+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 231 ~~~~---------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNRL---------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1100 01122345789999999999999999999999999876
No 272
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=7.8e-35 Score=298.64 Aligned_cols=251 Identities=27% Similarity=0.421 Sum_probs=204.0
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe--CCcceEEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLE--TEVPLLVY 465 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 465 (700)
+|++.+.||.|+||.||++... +++.||+|.+.. ......+.+.+|++++++++|+||+++++.+.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999965 678999998764 334456778999999999999999999998764 34568999
Q ss_pred eeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHH-----hcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 466 EFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLH-----SAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH-----~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
||+++++|.+++.... ....+++..++.++.||++||+||| +.+ ++|+||+|+||+++.++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999999999997642 2345899999999999999999999 666 999999999999999999999999999
Q ss_pred cccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 540 RSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 540 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
........ ......++..|+|||++.+..++.++||||||+++++|++|..||......+ +.+.+..+..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~-- 227 (265)
T cd08217 158 KILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ-------LASKIKEGKF-- 227 (265)
T ss_pred ccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH-------HHHHHhcCCC--
Confidence 86543322 1233468999999999999889999999999999999999999997654221 1122222211
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+...+..+.+++.+||+.+|++||++++|++.
T Consensus 228 -------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 228 -------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 12233455678999999999999999999999874
No 273
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.1e-34 Score=298.60 Aligned_cols=252 Identities=24% Similarity=0.452 Sum_probs=203.0
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC------hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD------ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
+|+..+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.++++++|+||+++++.+.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4788899999999999999964 68899999876432 1235788999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC-cEEEeecCCCccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGASRSV 542 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~-~~kl~DfGl~~~~ 542 (700)
|+||+++++|.+++.+.. ++++..+..++.|++.||.|||+++ ++|+||+|+||+++.++ .+||+|||++...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999997643 4899999999999999999999999 99999999999998775 6999999998765
Q ss_pred ccCCc---eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 543 MIDQT---HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 543 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
..... .......++..|+|||.+.+..++.++||||||+++++|++|..||......... .......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~~------- 224 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL---ALIFKIA------- 224 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH---HHHHHHh-------
Confidence 43211 1122345788999999998888999999999999999999999999654322111 1110000
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
........+......+.+++.+||+.+|.+||++.|+++
T Consensus 225 --~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 225 --SATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --ccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 001112233445677889999999999999999999985
No 274
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.7e-35 Score=304.70 Aligned_cols=263 Identities=24% Similarity=0.369 Sum_probs=198.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE-SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.++|++.+.||+|++|.||+|..+ +++.||||.+..... .....+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 367899999999999999999976 688999998764322 223457789999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|++ ++|.+++.+... .+++..+..++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 84 YLD-TDLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred cCC-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 997 599999876543 4899999999999999999999999 9999999999999999999999999987543221
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh---cchhh---
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE---NRLFE--- 619 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 619 (700)
. ......++..|+|||++.+ ..++.++||||||+++|+|++|+.||........ ........+.. ..+..
T Consensus 158 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07844 158 K-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED--QLHKIFRVLGTPTEETWPGVSS 234 (291)
T ss_pred c-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHhcCCCChhhhhhhhh
Confidence 1 1122346789999999875 4588999999999999999999999975542111 11111110000 00000
Q ss_pred ----------hc-chhhhhcc-CHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 ----------VL-DARVLKEA-KEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 ----------~~-d~~~~~~~-~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.. ...+.... .......+.+++.+||+.+|++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00 00000000 0111256789999999999999999999875
No 275
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.1e-34 Score=304.80 Aligned_cols=255 Identities=23% Similarity=0.302 Sum_probs=202.5
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||.||++... .++.|++|.+.... ....+.+.+|+++++.++|+||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46889999999999999999976 57899999876533 234567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999997653 3899999999999999999999999 999999999999999999999999988632110
Q ss_pred C--------------ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHH
Q 005355 546 Q--------------THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611 (700)
Q Consensus 546 ~--------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 611 (700)
. ........++..|+|||++....++.++||||||+++|||++|..||.+....+ ....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~-------~~~~ 227 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-------LFGQ 227 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHH
Confidence 0 001112357889999999998899999999999999999999999997543322 1111
Q ss_pred HHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 612 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
...+... .+. .....+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 228 ~~~~~~~---~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 228 VISDDIE---WPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHhcccC---CCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1111110 000 011345568899999999999999997666666644
No 276
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=312.30 Aligned_cols=246 Identities=28% Similarity=0.419 Sum_probs=203.5
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh---hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE---SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
...|.-++.||.|+||.||.|.+. +.+.||||++.-... ..+.+++.|+..|++++|||++.+.|++..+...|||
T Consensus 25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence 345677789999999999999965 788999999875443 3467889999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|||+ -|+-.|++.-... ++-+..+..|..+.+.||+|||+++ .||||||..|||+++.|.|||+|||.+....+
T Consensus 105 MEYC-lGSAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 105 MEYC-LGSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HHHH-hccHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 9999 5688888765543 4889999999999999999999999 99999999999999999999999998875533
Q ss_pred CCceeeeeeeccccccccccc---ccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 545 DQTHLTTRVQGTFGYLDPEYF---RSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~---~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
...++||+.|||||++ ..+.|+-|+||||||++-.||.-.++|+...+... ++..+.++..
T Consensus 179 -----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-------ALYHIAQNes---- 242 (948)
T KOG0577|consen 179 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNES---- 242 (948)
T ss_pred -----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-------HHHHHHhcCC----
Confidence 3446799999999987 46789999999999999999999999986554221 2222222221
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.+ ...+.+..+..++..||+.-|.+|||.++++.
T Consensus 243 -PtL---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 243 -PTL---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -CCC---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 111 13566778999999999999999999987764
No 277
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.6e-34 Score=297.70 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=191.0
Q ss_pred ceEeeeCCeEEEEEEEcCC---cEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 396 RILGQGGQGTVYKGMLTNG---RIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
+.||+|+||.||++...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999985433 346677665433 345678999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC-cee
Q 005355 472 TLYQYIHDQTE-EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ-THL 549 (700)
Q Consensus 472 sL~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~-~~~ 549 (700)
+|.++++.... ...+++..+..++.||+.||+|||+.+ ++||||||+|||++.++.+||+|||++....... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999986432 233677788899999999999999999 9999999999999999999999999886432111 112
Q ss_pred eeeeeccccccccccccc-------CCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 550 TTRVQGTFGYLDPEYFRS-------SQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~-------~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
.....++..|+|||++.. ..++.++||||||+++|||++ +..||......+ .+...+.. ......
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------~~~~~~~~-~~~~~~ 230 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE------VLNHVIKD-QQVKLF 230 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHhh-cccccC
Confidence 223457889999999753 345789999999999999997 567775443221 11111221 112222
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
++.+.. .....+.+++.+|| .+|++||++++|++.|.
T Consensus 231 ~~~~~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLEL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccCC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 332222 23456778999999 67999999999999874
No 278
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.1e-35 Score=305.57 Aligned_cols=261 Identities=23% Similarity=0.341 Sum_probs=197.4
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++|+||+++++++.+.+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999976 68899999876432 22345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
++ ++|.+++..... .+++..++.++.||++||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 96 588888765432 3899999999999999999999999 99999999999999999999999999875532221
Q ss_pred eeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc---c---hhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN---R---LFEV 620 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~ 620 (700)
......++..|+|||++.+. .++.++||||||+++|+|++|..|+......+. ............ . ....
T Consensus 155 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 155 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred -CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH--HHHHHHHHhCCCChHHhHHhhhc
Confidence 12234578899999998764 478999999999999999999888643332211 111111100000 0 0000
Q ss_pred cchhh---------hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 621 LDARV---------LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 621 ~d~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.+... ........+..+.+|+.+||+.||.+|||++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000 01111234567889999999999999999999976
No 279
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.3e-34 Score=297.34 Aligned_cols=251 Identities=27% Similarity=0.448 Sum_probs=203.0
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE--SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|+..+.||+|+||.||++... +++.|++|.++.... ...+.+.+|+++++.++|+||+++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999965 688999998776444 3678899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++.... .+++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 99999999997643 3789999999999999999999999 99999999999999999999999999886643322
Q ss_pred eee---eeeecccccccccccccCC---CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 548 HLT---TRVQGTFGYLDPEYFRSSQ---FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 548 ~~~---~~~~gt~~y~aPE~~~~~~---~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
... ....++..|+|||++.... .+.++||||||+++|+|++|..||........ ... .......
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-----~~~-~~~~~~~---- 224 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-----IMF-HVGAGHK---- 224 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-----HHH-HHhcCCC----
Confidence 221 1345788999999998766 88999999999999999999999975432111 000 0111100
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.+.. .......+.+++.+||+.+|.+||++.|++.
T Consensus 225 -~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 -PPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -CCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00100 1123556789999999999999999999875
No 280
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.1e-34 Score=296.38 Aligned_cols=249 Identities=25% Similarity=0.401 Sum_probs=202.7
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|+..+.||+|+||.||++... +++.+|||.+... .....+.+.+|++++++++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5788999999999999999975 6889999987643 334567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC-CcEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~-~~~kl~DfGl~~~~~~~~ 546 (700)
+++++|.+++.... ...+++..++.++.|+++||+|||+++ ++|+||+|+||+++++ ..+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999997643 234899999999999999999999999 9999999999999855 468999999997653322
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
......++..|+|||.+....++.++||||||+++|+|++|+.||...+.... .. ........
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~------~~-~~~~~~~~-------- 219 (256)
T cd08220 157 --KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL------VL-KIMSGTFA-------- 219 (256)
T ss_pred --cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH------HH-HHHhcCCC--------
Confidence 22234588899999999988899999999999999999999999975543221 11 11111111
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..+......+.+++.+||+.+|++|||++|+++.
T Consensus 220 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 -PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred -CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1112245578899999999999999999999863
No 281
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8.9e-35 Score=307.16 Aligned_cols=197 Identities=25% Similarity=0.403 Sum_probs=160.7
Q ss_pred cceEeeeCCeEEEEEEEc---CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe--CCcceEEEeeCC
Q 005355 395 NRILGQGGQGTVYKGMLT---NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLE--TEVPLLVYEFIP 469 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~E~~~ 469 (700)
.++||+|+||.||+|+.. .+..||+|.+.... ....+.+|++++++++||||+++++++.. ....++|+||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 358999999999999965 35789999876532 23467899999999999999999999854 456789999986
Q ss_pred CCCHHHHHhccC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEE----CCCCcEEEeecCCC
Q 005355 470 NGTLYQYIHDQT------EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILL----DDKYRAKVSDFGAS 539 (700)
Q Consensus 470 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl----~~~~~~kl~DfGl~ 539 (700)
++|.+++.... ....+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 57888875321 1234889999999999999999999999 9999999999999 56679999999999
Q ss_pred cccccCCce--eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCC
Q 005355 540 RSVMIDQTH--LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTD 597 (700)
Q Consensus 540 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~ 597 (700)
+........ ......+|+.|+|||++.+ ..++.++||||||+++|||++|++||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 865432221 2234568999999999876 458899999999999999999999997544
No 282
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8.7e-35 Score=303.74 Aligned_cols=251 Identities=27% Similarity=0.404 Sum_probs=206.6
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
.++|.+.+.||+|+||.||++... +++.|++|.+........+.+.+|+.+++.++|||++++++.+...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 478899999999999999999864 6789999998765555567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++.... +++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~~~----l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 98 LAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 99999999997542 789999999999999999999999 99999999999999999999999998875543322
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
......+++.|+|||.+....++.++||||||+++|+|++|+.||......+... .....+. ...
T Consensus 171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~~~~~~~--------~~~ 235 (293)
T cd06647 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGT--------PEL 235 (293)
T ss_pred -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------ehhcCCC--------CCC
Confidence 2223458889999999988889999999999999999999999997554322110 0000000 001
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..+......+.+++.+||+.+|++||++.+++.+
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1122344568899999999999999999999975
No 283
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.5e-34 Score=301.58 Aligned_cols=244 Identities=27% Similarity=0.374 Sum_probs=202.2
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++|++.+.||+|+||.||++.+. +++.||+|.+... .....+.+.+|++++++++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47889999999999999999976 5899999987642 2344577899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++++|.+++.... .+++..+..++.|+++||.|||+.+ ++|+||+|+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 9999999999997653 3899999999999999999999999 999999999999999999999999999765433
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
.....+++.|+|||.+.+...+.++||||||+++++|++|..||......+ .......+..
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~-------- 215 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ-------IYEKILEGKV-------- 215 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHhcCCc--------
Confidence 233458899999999988889999999999999999999999997554211 1111111111
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
..+......+.+++.+||..+|.+|| +++|+++
T Consensus 216 --~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 216 --RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred --cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 11222356788999999999999999 6666664
No 284
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1e-34 Score=303.10 Aligned_cols=264 Identities=22% Similarity=0.298 Sum_probs=201.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--CcceEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVPLLV 464 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 464 (700)
++|++.+.||+|+||.||+|++. +++.+++|.++... ......+.+|+.++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57888999999999999999986 58899999886533 22334677899999999999999999998877 889999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
+||++ ++|.+++..... .+++..++.++.||+.||+|||+.+ ++|+||||+|||++.++.+||+|||++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99996 599999876543 4899999999999999999999999 99999999999999999999999999986543
Q ss_pred CCceeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH--------------
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL-------------- 609 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~-------------- 609 (700)
... ......+++.|+|||.+.+. .++.++||||||+++|+|++|..||......+.........
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 159 PLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred Ccc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 321 22334578899999998764 46899999999999999999999997654332111100000
Q ss_pred HHHHhcchhhhcchhhhhccCHH-HHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 610 EAMKENRLFEVLDARVLKEAKEE-EIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 610 ~~~~~~~~~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.......+.......+....+.. ....+.+++++||+.+|++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000001111111111122221 3567889999999999999999999986
No 285
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.9e-34 Score=298.65 Aligned_cols=248 Identities=28% Similarity=0.430 Sum_probs=203.1
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+-|+..+.||+|+||.||+|... +++.||||...... ....+.+.+|+.++++++|+||+++++.+.+.+..++||||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 34678889999999999999865 68899999876433 34456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06641 84 LGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch-
Confidence 9999999998753 3899999999999999999999999 9999999999999999999999999987553221
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
.......++..|+|||.+.+..++.++||||||+++|+|++|..||....... ....+..... .
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~---------~ 219 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK-------VLFLIPKNNP---------P 219 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH-------HHHHHhcCCC---------C
Confidence 11223457889999999998889999999999999999999999996543221 1111111111 1
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
......+..+.+++.+||+.+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 220 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1122345678899999999999999999999984
No 286
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-36 Score=314.20 Aligned_cols=244 Identities=28% Similarity=0.434 Sum_probs=204.7
Q ss_pred eEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHHH
Q 005355 397 ILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQ 475 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 475 (700)
+||+|.||+||-|++. +...+|||-+...+....+-+.+|+.+-++++|+|||+.+|.+.+.+..-+.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999976 466789998887777777889999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC-CCCcEEEeecCCCcccccCCceeeee
Q 005355 476 YIHDQTEEFPI--TWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAKVSDFGASRSVMIDQTHLTTR 552 (700)
Q Consensus 476 ~l~~~~~~~~l--~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~-~~~~~kl~DfGl~~~~~~~~~~~~~~ 552 (700)
+|+..=. ++ .+..+-.+.+||++||.|||.+. |||||||-+|+||+ -.|.+||+|||-++.+. .-+..+.+
T Consensus 662 LLrskWG--PlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-ginP~TET 735 (1226)
T KOG4279|consen 662 LLRSKWG--PLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-GINPCTET 735 (1226)
T ss_pred HHHhccC--CCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhc-cCCccccc
Confidence 9986532 35 77888899999999999999999 99999999999995 57899999999988653 22334556
Q ss_pred eecccccccccccccC--CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 553 VQGTFGYLDPEYFRSS--QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 553 ~~gt~~y~aPE~~~~~--~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
..||+.|||||++..+ .|..++|||||||++.||.||++||........ .+.+-+.+ ......+
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--------AMFkVGmy------KvHP~iP 801 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--------AMFKVGMY------KVHPPIP 801 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--------hhhhhcce------ecCCCCc
Confidence 6799999999999764 588999999999999999999999975544321 11121211 1223446
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.+...+...+|.+|+..+|.+||+++++++
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 677788899999999999999999999987
No 287
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1e-34 Score=301.71 Aligned_cols=260 Identities=24% Similarity=0.352 Sum_probs=199.1
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|+..+.||+|++|.||+|+.. +++.||||++.... ....+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 5888999999999999999975 68899999876432 23346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+. ++|.+++..... ..+++..++.++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 689999876432 34899999999999999999999999 99999999999999999999999999875532221
Q ss_pred eeeeeeecccccccccccccCC-CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc-----------
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQ-FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN----------- 615 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~-~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 615 (700)
......++..|+|||++.+.. ++.++||||||+++|||++|+.||......+. .... .......
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07860 156 -TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRI-FRTLGTPDEVVWPGVTSL 231 (284)
T ss_pred -ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHH-HHHhCCCChhhhhhhhHH
Confidence 122334678999999887654 58899999999999999999999976543221 1111 1000000
Q ss_pred -----chhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 616 -----RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 616 -----~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.+....... ...........+.+++.+||+.||.+||+++|+++
T Consensus 232 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 232 PDYKPSFPKWARQD-FSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHhhcccccccC-HHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000 00111123456789999999999999999999985
No 288
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.7e-35 Score=305.69 Aligned_cols=246 Identities=27% Similarity=0.399 Sum_probs=200.8
Q ss_pred ccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCC
Q 005355 394 TNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGT 472 (700)
Q Consensus 394 ~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 472 (700)
....||+|+||.||++... +++.||+|.+........+.+.+|+.+++.++|||++++++.+...+..++++||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3457999999999999975 688999999876555556778999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeee
Q 005355 473 LYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552 (700)
Q Consensus 473 L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~ 552 (700)
|.+++... .+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....... .....
T Consensus 105 L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~ 176 (297)
T cd06659 105 LTDIVSQT----RLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKS 176 (297)
T ss_pred HHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccc
Confidence 99988653 2899999999999999999999999 9999999999999999999999999987543322 12233
Q ss_pred eecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHH
Q 005355 553 VQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEE 632 (700)
Q Consensus 553 ~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 632 (700)
..++..|+|||++.+..++.++||||||++++||++|+.||......+.. ..+....... ......
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~~~~-------~~~~~~ 242 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-------KRLRDSPPPK-------LKNAHK 242 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HHHhccCCCC-------ccccCC
Confidence 56889999999999889999999999999999999999999754432211 1111110000 000112
Q ss_pred HHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 633 EIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 633 ~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
....+.+++.+||+.+|++||+++++++.
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 34568889999999999999999999985
No 289
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.3e-34 Score=295.32 Aligned_cols=252 Identities=27% Similarity=0.397 Sum_probs=208.5
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE-SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
++|++.+.||+|++|.||+++.. +++.|+||++..... ...+.+.+|+.++.+++|+|++++++.+...+..++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 46888999999999999999987 589999998876543 4567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
+++++|.+++... ..+++..++.++.|+++||+|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 9999999999865 248999999999999999999999 99 9999999999999999999999999988654332
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|..||............ ..+.....
T Consensus 155 ~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~----~~~~~~~~--------- 220 (264)
T cd06623 155 DQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELM----QAICDGPP--------- 220 (264)
T ss_pred Cc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHH----HHHhcCCC---------
Confidence 22 23455888999999999999999999999999999999999999765431111111 11111111
Q ss_pred hccCHH-HHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 627 KEAKEE-EIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 627 ~~~~~~-~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+.. .+..+.+++.+||..+|++||++.++++.
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111222 55679999999999999999999999873
No 290
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.5e-36 Score=308.86 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=207.7
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEcc--ccChhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcc
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSK--LVDESNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVP 461 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 461 (700)
+.+....|+++++||+||.+.||++...+.+.+|+|+.. ..+.+...-|.+|+..|.+|+ |.+|++|+++-..++..
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 345567899999999999999999998888899998754 467777899999999999994 99999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
|||||+= ..+|..+|+..... ++.-.+..+..|++.|+.++|.+| |||-||||.|+|+-. |.+||+|||++..
T Consensus 436 YmvmE~G-d~DL~kiL~k~~~~--~~~~~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~a 508 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKKSI--DPDWFLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANA 508 (677)
T ss_pred EEEeecc-cccHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcc
Confidence 9999975 67999999877543 343377889999999999999999 999999999999965 4899999999998
Q ss_pred cccCCce-eeeeeecccccccccccccCC-----------CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH
Q 005355 542 VMIDQTH-LTTRVQGTFGYLDPEYFRSSQ-----------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL 609 (700)
Q Consensus 542 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~-----------~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 609 (700)
+..+... .....+||+.||+||.+.... .+.++||||||||||+|+.|+.||..... ..
T Consensus 509 I~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-----~~---- 579 (677)
T KOG0596|consen 509 IQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-----QI---- 579 (677)
T ss_pred cCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-----HH----
Confidence 8766554 345678999999999985432 45789999999999999999999963321 11
Q ss_pred HHHHhcchhhhcchhhhhccCHH-HHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 610 EAMKENRLFEVLDARVLKEAKEE-EIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 610 ~~~~~~~~~~~~d~~~~~~~~~~-~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.++..+.++.-..+++.- ...++.++++.||+.||++||+..|+|+
T Consensus 580 -----aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 580 -----AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -----HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 234455555443333211 1123899999999999999999999987
No 291
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.7e-34 Score=299.88 Aligned_cols=264 Identities=22% Similarity=0.344 Sum_probs=203.0
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE-SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
+|++.+.||+|++|.||+|+.. +++.||||.++.... ...+.+.+|++++++++|+||+++++.+.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5888999999999999999986 688999998875432 33467788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
+ ++|.+++........+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 7 489998876654456899999999999999999999999 99999999999999999999999999975432211
Q ss_pred eeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--------HHHHHh-cch-
Q 005355 549 LTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF--------LEAMKE-NRL- 617 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~~-~~~- 617 (700)
......++..|++||++.+. .++.++||||||+++|+|++|+.||......+........ ...+.. ..+
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhc
Confidence 12234468899999998664 5788999999999999999999999866543321111000 000000 000
Q ss_pred ---hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 ---FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ---~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
....+ .............+.+++.+||+.+|.+||+++++++
T Consensus 236 ~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 236 PTFPRYPP-QDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ccccCCCh-HHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 0011111233567889999999999999999999985
No 292
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.7e-34 Score=297.97 Aligned_cols=254 Identities=23% Similarity=0.419 Sum_probs=200.4
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC----------hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD----------ESNIEQFINEVAILSQINHRNVVKLLGCCLETE 459 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 459 (700)
+|.+.+.||+|+||.||+|... +++.||+|.++... ....+.+.+|+.+++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677899999999999999865 68899999865321 112356888999999999999999999999999
Q ss_pred cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
..++|+||+++++|.+++.... .+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999999998753 4899999999999999999999999 999999999999999999999999998
Q ss_pred cccccCCce-eeeeeecccccccccccccCC--CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcc
Q 005355 540 RSVMIDQTH-LTTRVQGTFGYLDPEYFRSSQ--FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENR 616 (700)
Q Consensus 540 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 616 (700)
......... ......++..|+|||++.... ++.++|+||||+++|+|++|..||......+. ....... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~-~ 228 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA------MFKLGNK-R 228 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH------HHHhhcc-c
Confidence 754322111 123345788999999987654 88999999999999999999999964332211 1111111 0
Q ss_pred hhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 617 LFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 617 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
....+ ..+.....+..+.+++.+||+.+|++||+++++++.
T Consensus 229 ~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 229 SAPPI----PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCcC----CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 01111 111222345678999999999999999999999863
No 293
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.1e-34 Score=303.63 Aligned_cols=260 Identities=28% Similarity=0.341 Sum_probs=200.3
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChh-----hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDES-----NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
+|++.+.||+|+||.||+|... +++.||||++...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4788899999999999999976 6899999988754322 345677899999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|||+ +++|.+++.... ..+++..++.++.||++||+|||+++ ++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 999999997654 24899999999999999999999999 99999999999999999999999999976543
Q ss_pred CCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh---c-----
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE---N----- 615 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~----- 615 (700)
... ......++..|+|||.+.+ ..++.++||||||++++||++|.+||......+.. ......... .
T Consensus 155 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 230 (298)
T cd07841 155 PNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL---GKIFEALGTPTEENWPGV 230 (298)
T ss_pred CCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHH---HHHHHHcCCCchhhhhhc
Confidence 321 1222346778999998865 46789999999999999999998887654432211 111110000 0
Q ss_pred -chhhhcchhh-----hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 616 -RLFEVLDARV-----LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 616 -~~~~~~d~~~-----~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.......... ...........+.+++.+||+.+|++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0000000000 00111233567889999999999999999999998
No 294
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.8e-34 Score=299.58 Aligned_cols=251 Identities=24% Similarity=0.383 Sum_probs=195.3
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHH-HhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAI-LSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++|++.+.||+|+||.||++.+. +++.||+|+++... ......+..|+.+ ++.++|+|++++++++...+..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 47889999999999999999976 68999999876532 2233456666665 566789999999999999999999999
Q ss_pred eCCCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 467 FIPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 467 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
|++ ++|.+++... .....+++..++.++.||+.||+|||++ + ++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 995 7898888653 2234589999999999999999999997 7 99999999999999999999999999876532
Q ss_pred CCceeeeeeeccccccccccccc----CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRS----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
. .......++..|+|||.+.+ ..++.++|+||||+++|+|++|+.||....... ........ +..
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~-~~~--- 225 (283)
T cd06617 157 S--VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-----QQLKQVVE-EPS--- 225 (283)
T ss_pred c--cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-----HHHHHHHh-cCC---
Confidence 2 11223457889999998865 456889999999999999999999996432211 11111111 110
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.+ .....+..+.+++.+||..+|++||++.++++
T Consensus 226 --~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 --PQL---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001 01124567889999999999999999999987
No 295
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=6.7e-35 Score=299.64 Aligned_cols=252 Identities=27% Similarity=0.405 Sum_probs=204.5
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
++|+..+.||+|+||.||++.+. +++.|++|++.... ....+++.+|++++++++|+||+++++.+...+..++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 46788899999999999999986 68899999876543 34567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
+++++|.+++.... ..+++..+..++.|++.||+|||+ .+ ++|+||||+||++++++.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 99999999998653 348999999999999999999999 88 9999999999999999999999999987553222
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.. ...++..|+|||++.+..++.++||||||+++++|++|..||....... ......... +.....
T Consensus 156 ~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~-~~~~~~--------- 221 (265)
T cd06605 156 AK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQY-IVNEPP--------- 221 (265)
T ss_pred hh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHH-HhcCCC---------
Confidence 11 1558889999999999999999999999999999999999997543211 111111111 111110
Q ss_pred hccCHH-HHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 627 KEAKEE-EIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 627 ~~~~~~-~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...+.. ....+.+++.+||..+|++|||+.+++.
T Consensus 222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 222 PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 011111 4567899999999999999999999975
No 296
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.5e-34 Score=298.47 Aligned_cols=255 Identities=26% Similarity=0.396 Sum_probs=202.2
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCC-----
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETE----- 459 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~----- 459 (700)
.++++|++.+.||+|+||.||+|... +++.+++|.+..... ..+.+.+|+.+++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35689999999999999999999986 578999998776544 346789999999998 7999999999997654
Q ss_pred -cceEEEeeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 460 -VPLLVYEFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 460 -~~~lv~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
..++||||+++++|.+++.... .+..+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence 4799999999999999987643 2335899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCceeeeeeeccccccccccccc-----CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHH
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRS-----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAM 612 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 612 (700)
++....... .......++..|+|||++.. ..++.++||||||++|++|++|..||......+. ... +
T Consensus 159 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~~~-~ 230 (275)
T cd06608 159 VSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA------LFK-I 230 (275)
T ss_pred cceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH------HHH-h
Confidence 987543222 22233458889999998753 3467899999999999999999999964332111 111 1
Q ss_pred HhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 613 KENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 613 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.......+ ..+......+.+|+.+||..||++|||+.++++
T Consensus 231 ~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 231 PRNPPPTL-------KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hccCCCCC-------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111110 111234567889999999999999999999986
No 297
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.1e-34 Score=299.54 Aligned_cols=248 Identities=25% Similarity=0.393 Sum_probs=202.7
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
.|...+.||+|++|.||++... +++.+++|++........+.+.+|+.+++.++|+||+++++.+...+..++++||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3445579999999999999965 688999999876666666778999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+++|.+++... .+++..+..++.|++.||+|||+++ ++||||+|+||+++.++.++|+|||++........ .
T Consensus 100 ~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~ 171 (285)
T cd06648 100 GGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-R 171 (285)
T ss_pred CCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc-c
Confidence 99999999763 3899999999999999999999999 99999999999999999999999998875433221 2
Q ss_pred eeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhcc
Q 005355 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEA 629 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 629 (700)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||...+..+. . ........ +.+ ..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~------~-~~~~~~~~-----~~~--~~ 237 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA------M-KRIRDNLP-----PKL--KN 237 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH------H-HHHHhcCC-----CCC--cc
Confidence 2334588999999999988899999999999999999999999975432211 1 11111100 000 01
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 630 KEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 630 ~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
....+..+.+++.+||+.+|++||+++++++
T Consensus 238 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 238 LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1124457899999999999999999999986
No 298
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.2e-34 Score=299.29 Aligned_cols=263 Identities=24% Similarity=0.315 Sum_probs=201.4
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--CcceEEEe
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVPLLVYE 466 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~E 466 (700)
|++.+.||+|+||.||+|... +++.+|+|++.... ......+.+|++++++++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999976 58899999987653 33456788999999999999999999999988 88999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|++ ++|.+++.... ..+++..++.++.||++||+|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~-~~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMD-HDLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred ccc-ccHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 997 48999887653 24899999999999999999999999 9999999999999999999999999998664443
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcch--------
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRL-------- 617 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------- 617 (700)
........++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......................+
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence 222333456788999998765 46789999999999999999999999765543221111100000000000
Q ss_pred ------hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 ------FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ------~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.......+.......++..+.+++++||+.+|++||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000111111111112567899999999999999999999986
No 299
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.1e-34 Score=298.08 Aligned_cols=247 Identities=26% Similarity=0.431 Sum_probs=200.8
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcC---CCceeeEEeEEEeCCcceEEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-DESNIEQFINEVAILSQIN---HRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 465 (700)
.|+..+.||+|+||.||+|.+. +++.||+|.+... .....+.+.+|+.++++++ |+|++++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4778899999999999999974 6889999987653 3445677889999999986 999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++++|.+++... .+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999999998654 3899999999999999999999999 999999999999999999999999998765433
Q ss_pred Cceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
.. ......++..|+|||.+.+ ..++.++||||||+++|+|++|..||......... ....... .+.
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~-------~~~~~~~-----~~~ 221 (277)
T cd06917 155 SS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM-------MLIPKSK-----PPR 221 (277)
T ss_pred cc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh-------hccccCC-----CCC
Confidence 32 2233458889999999865 45789999999999999999999999754332210 0011000 011
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.. ...+..+.+++.+||+.+|++||++.|++.
T Consensus 222 ~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 222 LED---NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 111 114567889999999999999999999987
No 300
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.1e-34 Score=300.76 Aligned_cols=247 Identities=27% Similarity=0.403 Sum_probs=198.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
.+.|+..+.||+|+||.||+|+.. +++.||+|.+... .....+.+.+|+++++.++|||++++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 456888999999999999999975 6889999987642 233456789999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
+||++ |+|.+++..... .+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.....
T Consensus 94 ~e~~~-g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 94 MEYCL-GSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HHhhC-CCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 99996 678777764432 4899999999999999999999999 99999999999999999999999999865432
Q ss_pred CCceeeeeeecccccccccccc---cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
. ....++..|+|||++. ...++.++||||||+++|||++|..||........ . .....+..
T Consensus 168 ~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~------~-~~~~~~~~---- 231 (307)
T cd06607 168 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------L-YHIAQNDS---- 231 (307)
T ss_pred C-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH------H-HHHhcCCC----
Confidence 2 2245788999999874 45688999999999999999999999975433221 0 00111100
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
........+..+.+++.+||+.+|++||++.+++..
T Consensus 232 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 232 ----PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred ----CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 011112345678999999999999999999999874
No 301
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.3e-34 Score=300.13 Aligned_cols=264 Identities=24% Similarity=0.334 Sum_probs=197.9
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE-SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
++++|++.+.||+|+||.||+|... +++.||+|.+..... .....+.+|+.+++.++|+||+++.+++...+..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3578999999999999999999875 688999998765332 22346788999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+. ++|.+++..... .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9995 778777765432 3788889999999999999999999 999999999999999999999999998754322
Q ss_pred CceeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh----------
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE---------- 614 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------- 614 (700)
.. ......+++.|+|||++.+. .++.++||||||+++|||++|..||........ ...........
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 157 SQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFE--QLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHH--HHHHHHHHcCCCChhhhhhhh
Confidence 11 12233478899999998764 578899999999999999999999975543211 00000000000
Q ss_pred ---cchhhhcc---hhhhhc--cCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 615 ---NRLFEVLD---ARVLKE--AKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 615 ---~~~~~~~d---~~~~~~--~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
........ +..... ........+.+++.+|++.||++|||++|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000 000000 00112456889999999999999999999875
No 302
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.4e-34 Score=290.47 Aligned_cols=249 Identities=31% Similarity=0.432 Sum_probs=206.6
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
.|+..+.||+|++|.||++... +++.+++|++........+.+.+|++++++++|+|++++++.+...+..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999986 688999999887655567889999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+++|.+++.... ..+++..+..++.|++.||++||+.+ ++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 999999998753 24899999999999999999999999 99999999999999999999999999876644332
Q ss_pred eeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhcc
Q 005355 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEA 629 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 629 (700)
.....++..|+|||.+.....+.++||||||+++++|++|..||......+.. .............
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-------~~~~~~~~~~~~~------- 219 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL-------FKIATNGPPGLRN------- 219 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH-------HHHHhcCCCCcCc-------
Confidence 33456889999999999888999999999999999999999999755322211 0111111111110
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 630 KEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 630 ~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
....+..+.+++.+||+.+|++|||+.|+++
T Consensus 220 ~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 220 PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1112567899999999999999999999986
No 303
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-34 Score=323.03 Aligned_cols=267 Identities=20% Similarity=0.284 Sum_probs=191.2
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEcC--CcEEEEE------------------EccccChhhHHHHHHHHHHHhhcCCCc
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLTN--GRIVAIK------------------KSKLVDESNIEQFINEVAILSQINHRN 447 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~h~n 447 (700)
..++|++.+.||+|+||+||++.++. +...++| +.. ........+.+|+.+|++++|+|
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 45789999999999999999987542 2222222 111 12233467889999999999999
Q ss_pred eeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEE
Q 005355 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTE--EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILL 525 (700)
Q Consensus 448 iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl 525 (700)
|+++++++...+..++|+|++ .++|.+++..... ........+..++.||+.||+|||+++ |+||||||+||||
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence 999999999999999999998 4678887765321 112346677889999999999999999 9999999999999
Q ss_pred CCCCcEEEeecCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCC-CCCCCchhhhhH
Q 005355 526 DDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP-IRSTDSEEDKSL 604 (700)
Q Consensus 526 ~~~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p-~~~~~~~~~~~~ 604 (700)
+.++.+||+|||+++.+............||..|+|||++.+..++.++||||||++||||++|..+ +..........+
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 9999999999999986644333333445699999999999999999999999999999999998754 433322221111
Q ss_pred HHHHHHHHH--hc-------chhhhcchhhhhcc---------CHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 605 VGYFLEAMK--EN-------RLFEVLDARVLKEA---------KEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 605 ~~~~~~~~~--~~-------~~~~~~d~~~~~~~---------~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.... .... .. .+...++....... .......+.+++.+||+.||.+|||+.|+++
T Consensus 381 ~~~~-~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 381 LKII-DSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHH-HhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1111 0000 00 00001100000000 0112345677899999999999999999987
No 304
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.6e-34 Score=297.95 Aligned_cols=252 Identities=27% Similarity=0.408 Sum_probs=207.2
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.++.|+..+.||+|+||.||++.+. +++.|++|.+..... ..+.+.+|++++++++|+|++++++.+...+..++++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4667888899999999999999987 688999999876544 56788999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 999999999998764 24999999999999999999999999 9999999999999999999999999886543222
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.......++..|++||++.+..++.++||||||+++|+|++|..||......... .. +.........
T Consensus 171 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~------~~-~~~~~~~~~~----- 237 (286)
T cd06614 171 -SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL------FL-ITTKGIPPLK----- 237 (286)
T ss_pred -hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH------HH-HHhcCCCCCc-----
Confidence 1223345788999999999888999999999999999999999999755433211 11 1111111100
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.....+..+.+++.+||+.+|.+||++.++++
T Consensus 238 --~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 238 --NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred --chhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 11124457889999999999999999999986
No 305
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-36 Score=311.16 Aligned_cols=250 Identities=25% Similarity=0.359 Sum_probs=205.5
Q ss_pred CCCccceEeeeCCeEEEEEEEcCC-cEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 391 NFNTNRILGQGGQGTVYKGMLTNG-RIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
-|.++..||.|+||.||+|..++. -..|.|.+........++|.-|++||....||+||+|++.|...+.++++.||+.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 345556799999999999997743 3456788888888889999999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
||-.+.++-.-.. .|++.++..+.+|++.||.|||+++ |||||||+.|||++-+|.++|+|||.+..... ....
T Consensus 113 GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qk 186 (1187)
T KOG0579|consen 113 GGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQK 186 (1187)
T ss_pred CchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh-HHhh
Confidence 9999999876543 4999999999999999999999999 99999999999999999999999999865322 2233
Q ss_pred eeeeeccccccccccc-----ccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 550 TTRVQGTFGYLDPEYF-----RSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~-----~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
...++||+.|||||++ ...+|+.++||||||++|.||..+.+|-...++. ..++...+.... .
T Consensus 187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM------RVllKiaKSePP------T 254 (1187)
T KOG0579|consen 187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIAKSEPP------T 254 (1187)
T ss_pred hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH------HHHHHHhhcCCC------c
Confidence 4567899999999986 4568999999999999999999999997644322 122222222111 0
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+ ..+......+.+++.+||..||+.||++.++++
T Consensus 255 L--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 255 L--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred c--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1 113445667899999999999999999999986
No 306
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.5e-34 Score=302.40 Aligned_cols=266 Identities=25% Similarity=0.326 Sum_probs=199.2
Q ss_pred CCCccceEeeeCCeEEEEEEEcC---CcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--Ccce
Q 005355 391 NFNTNRILGQGGQGTVYKGMLTN---GRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVPL 462 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 462 (700)
+|++.++||+|+||.||+|.... ++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 47888999999999999999753 7899999887632 34456788999999999999999999999988 7889
Q ss_pred EEEeeCCCCCHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC----CCcEEEeec
Q 005355 463 LVYEFIPNGTLYQYIHDQTE--EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD----KYRAKVSDF 536 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~----~~~~kl~Df 536 (700)
+||||++ ++|.+++..... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 477777754322 235899999999999999999999999 999999999999999 999999999
Q ss_pred CCCcccccCCc--eeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhh------hHHHH
Q 005355 537 GASRSVMIDQT--HLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK------SLVGY 607 (700)
Q Consensus 537 Gl~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~------~~~~~ 607 (700)
|++........ .......++..|+|||++.+ ..++.++||||||+++++|++|+.||......... .....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986543322 11233457889999998876 45789999999999999999999999765543210 00001
Q ss_pred HHHHHHhc------------chhh--------hcc-hhhhhccCH--HHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 608 FLEAMKEN------------RLFE--------VLD-ARVLKEAKE--EEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 608 ~~~~~~~~------------~~~~--------~~d-~~~~~~~~~--~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+...+... .... ... ..+...... .....+.+++.+||+.+|++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 11100000 0000 000 000000001 33456889999999999999999999985
No 307
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.5e-34 Score=295.34 Aligned_cols=260 Identities=26% Similarity=0.316 Sum_probs=202.2
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--CcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 465 (700)
++|+..+.||.|++|.||++... +++.+|+|.+.... ......+.+|++++++++|+||+++++++.+. ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46888899999999999999975 57899999877533 34457799999999999999999999998654 3678999
Q ss_pred eeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 466 EFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
||+++++|.+++.... ....+++..+..++.||+.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 9999999999876432 2334899999999999999999999999 99999999999999999999999999875432
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|..||....... ....+ ............+ ...
T Consensus 158 ~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~-~~~~~~~~~~~~~-~~~ 231 (287)
T cd06621 158 SL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP-LGPIE-LLSYIVNMPNPEL-KDE 231 (287)
T ss_pred cc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC-CChHH-HHHHHhcCCchhh-ccC
Confidence 21 123447889999999999999999999999999999999999997653311 11111 1111111111111 000
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
. .........+.+++.+||..+|.+|||+.|+++
T Consensus 232 ~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 P--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred C--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0 001123567899999999999999999999998
No 308
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.9e-34 Score=299.93 Aligned_cols=263 Identities=22% Similarity=0.301 Sum_probs=198.1
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCc-----
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQIN-HRNVVKLLGCCLETEV----- 460 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 460 (700)
++|++.+.||+|+||.||+|.+. +++.||||+..... ......+.+|+.+++.++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46889999999999999999976 68899999876432 223467889999999995 6999999999887665
Q ss_pred ceEEEeeCCCCCHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC-CCcEEEeecC
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTE--EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFG 537 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~-~~~~kl~DfG 537 (700)
.++||||+++ +|.+++..... ...+++..++.++.||++||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999975 89988865432 245899999999999999999999999 999999999999998 8899999999
Q ss_pred CCcccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc-
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN- 615 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 615 (700)
++........ ......+++.|+|||++.+ ..++.++||||||+++|+|++|..||......+.. ..+.......
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL---LHIFKLLGTPT 232 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHHHHhCCCC
Confidence 9875532211 1122346788999998865 45789999999999999999999999765432211 0111110000
Q ss_pred --chhhh-----------cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 616 --RLFEV-----------LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 616 --~~~~~-----------~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.+... ..+.............+.+++.+||+.+|.+||+++|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000 0000011111234567889999999999999999999875
No 309
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.5e-34 Score=308.09 Aligned_cols=268 Identities=24% Similarity=0.351 Sum_probs=201.5
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC-----cc
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQINHRNVVKLLGCCLETE-----VP 461 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 461 (700)
.++|++.++||+|+||.||+|.+. +++.||||+++... ......+.+|+.++++++|+||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 578999999999999999999965 68999999886432 334567889999999999999999999876543 46
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++++||++ ++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhcc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence 89999996 5888887653 3899999999999999999999999 99999999999999999999999999876
Q ss_pred cccCCce--eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh---c
Q 005355 542 VMIDQTH--LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE---N 615 (700)
Q Consensus 542 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 615 (700)
....... ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+...... .+...... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~---~~~~~~~~~~~~ 232 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLN---LILGVLGTPSQE 232 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHcCCCCHH
Confidence 5332211 1223457889999998755 568999999999999999999999997654322111 11100000 0
Q ss_pred chhhhcchhh--------------hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH--HHhchh
Q 005355 616 RLFEVLDARV--------------LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE--LGGIRA 667 (700)
Q Consensus 616 ~~~~~~d~~~--------------~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~--L~~l~~ 667 (700)
.+..+.+... ...........+.+++.+||+.+|++|||+.|+++. |+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 0000000000 000011235668899999999999999999999986 555543
No 310
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.3e-34 Score=302.97 Aligned_cols=265 Identities=26% Similarity=0.325 Sum_probs=198.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--CcceE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVPLL 463 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 463 (700)
.++|++.+.||+|+||.||+|... +++.||+|+++... ......+.+|+.++++++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 478999999999999999999975 68999999876432 22234567899999999999999999998765 45799
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
||||+. ++|.+++.... ..+++..++.++.||++||+|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 86 v~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 999996 58988887643 34899999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh---
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE--- 619 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 619 (700)
.... ......++..|+|||++.+ ..++.++||||||+++|||++|..||......+................+..
T Consensus 160 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 160 LPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred CccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 3221 1222345788999999865 5678999999999999999999999976554332111111000000000000
Q ss_pred -------hcchhhh---hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 -------VLDARVL---KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 -------~~d~~~~---~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.+..... ..........+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000 0000113566789999999999999999999986
No 311
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.1e-34 Score=294.43 Aligned_cols=249 Identities=25% Similarity=0.375 Sum_probs=201.9
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|++.+.||+|+||.||++... ++..+|+|.+... .....+.+.+|++++++++|+||+++++.+.+....++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5788899999999999999976 5789999987643 223456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC-cEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~-~~kl~DfGl~~~~~~~~ 546 (700)
+++++|.+++..... ..+++..+..++.|+++||+|||+.+ ++|+||||+||++++++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999999976432 24799999999999999999999999 99999999999998885 56999999987654322
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.......+++.|+|||++....++.++|+||||++++||++|..||......+ ...... ...+.
T Consensus 157 -~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~-~~~~~-------- 220 (257)
T cd08225 157 -ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ------LVLKIC-QGYFA-------- 220 (257)
T ss_pred -ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHh-cccCC--------
Confidence 22233458889999999988889999999999999999999999996543221 111111 11111
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.........+.+++.+||+.+|++|||+.|+++
T Consensus 221 -~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 221 -PISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 111233457889999999999999999999986
No 312
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3.4e-34 Score=300.52 Aligned_cols=265 Identities=27% Similarity=0.348 Sum_probs=200.9
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC---
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETE--- 459 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--- 459 (700)
+...++|++.+.||+|+||.||+|.++ +++.||+|+++... ......+.+|++++++++||||+++++++.+..
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 345688999999999999999999986 58899999886533 233456788999999999999999999987655
Q ss_pred -------cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEE
Q 005355 460 -------VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAK 532 (700)
Q Consensus 460 -------~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~k 532 (700)
..++|+||+++ +|.+++.... ..+++..+..++.||+.||+|||+.+ |+|+||||+||++++++.+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEE
Confidence 77899999975 7777776542 24899999999999999999999999 99999999999999999999
Q ss_pred EeecCCCcccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHH
Q 005355 533 VSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611 (700)
Q Consensus 533 l~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 611 (700)
|+|||++...............++..|+|||.+.+ ..++.++||||||++++||++|+.||......+. ...+...
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~---~~~~~~~ 233 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQ---LELISRL 233 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHH
Confidence 99999997654333222223346778999998865 4578899999999999999999999975443221 1111111
Q ss_pred HHhc---chhhh--------cc------hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 612 MKEN---RLFEV--------LD------ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 612 ~~~~---~~~~~--------~d------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.... .+..+ .+ ...... ....+..+.+++.+||+.+|.+||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1100 00000 00 000000 1123567899999999999999999999875
No 313
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.5e-34 Score=306.39 Aligned_cols=272 Identities=23% Similarity=0.319 Sum_probs=204.6
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC-----Cc
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLET-----EV 460 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 460 (700)
.++|.+.+.||+|+||+||++... +++.||||.+... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 467999999999999999999965 6899999987642 233456678899999999999999999987654 34
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.++|+||+. ++|.+++.... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 689999995 78998887543 3899999999999999999999999 9999999999999999999999999997
Q ss_pred ccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHH--------H
Q 005355 541 SVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLE--------A 611 (700)
Q Consensus 541 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~--------~ 611 (700)
...... .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||...+..+.......... .
T Consensus 157 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 157 TTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred ccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 653322 22233457889999998865 5688999999999999999999999976543221111110000 0
Q ss_pred HHhcchhhhc-------chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH--HHhchhhc
Q 005355 612 MKENRLFEVL-------DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE--LGGIRASI 669 (700)
Q Consensus 612 ~~~~~~~~~~-------d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~--L~~l~~~~ 669 (700)
+........+ +... .......+..+.+|+++||+.+|++|||++|+++. |+.+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSF-ARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred cCchhhhHHHHhcCcccccCH-HHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence 0000000000 0000 01112345678899999999999999999999987 76655443
No 314
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3e-34 Score=297.91 Aligned_cols=260 Identities=25% Similarity=0.353 Sum_probs=198.7
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
|++.+.||.|++|.||+|.+. +++.||+|++.... ....+.+.+|++++++++|+|++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 677889999999999999975 68999999876432 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
+ ++|.+++..... ..+++..++.++.|+++||+|||+.+ ++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 4 699999876542 24899999999999999999999999 99999999999999999999999999975432221
Q ss_pred eeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh---c---------
Q 005355 549 LTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE---N--------- 615 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~--------- 615 (700)
......++..|+|||++.+. .++.++||||||+++|+|++|+.||........ ....+ +.... .
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFRIF-RTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH-HHhCCCChHHhhhhhhch
Confidence 12223468899999988664 578899999999999999999999976543221 11100 00000 0
Q ss_pred chhhhc---chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 616 RLFEVL---DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 616 ~~~~~~---d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...... ............+..+.+++.+||+.+|.+||+++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 000001111223467889999999999999999999985
No 315
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=7.9e-34 Score=296.62 Aligned_cols=259 Identities=17% Similarity=0.249 Sum_probs=188.1
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcC----CcEEEEEEccccChhh-----------HHHHHHHHHHHhhcCCCceeeE
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTN----GRIVAIKKSKLVDESN-----------IEQFINEVAILSQINHRNVVKL 451 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l 451 (700)
...++|++.++||+|+||.||+|.+.+ +..+|+|+........ ......++..+..+.|+|++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 345789999999999999999999764 3466777543322211 0112233445566789999999
Q ss_pred EeEEEeCC----cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC
Q 005355 452 LGCCLETE----VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD 527 (700)
Q Consensus 452 ~~~~~~~~----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~ 527 (700)
+++..... ..++++|++. .++.+.+.... ..++..+..++.|++.||+|||+.+ |+||||||+|||++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~ 161 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDG 161 (294)
T ss_pred EEeeeEecCCceEEEEEEehhc-cCHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcC
Confidence 99876544 2357777763 46766665432 2578889999999999999999999 999999999999999
Q ss_pred CCcEEEeecCCCcccccCCce------eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhh
Q 005355 528 KYRAKVSDFGASRSVMIDQTH------LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEED 601 (700)
Q Consensus 528 ~~~~kl~DfGl~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~ 601 (700)
++.++|+|||+++........ ......||+.|+|||++.+..++.++||||||++|+||++|..||........
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 999999999999865432211 11224589999999999999999999999999999999999999986633221
Q ss_pred hhH--HHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 602 KSL--VGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 602 ~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
... ...+...+..+ .+. ....+..+.+++..|+..+|++||++.++++.|+
T Consensus 242 ~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 242 LIHAAKCDFIKRLHEG--------KIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHhHHHHHHHhhhh--------hhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 100 00111111111 110 1123467889999999999999999999999773
No 316
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.6e-34 Score=294.22 Aligned_cols=260 Identities=23% Similarity=0.302 Sum_probs=194.6
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeC--CcceEEEe
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQIN-HRNVVKLLGCCLET--EVPLLVYE 466 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~E 466 (700)
|++.+.||+|+||.||+|... +++.||+|+++... ........+|+.++.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999965 68899999876532 222334567888998885 99999999999987 88899999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|++ ++|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||+|+||+++. +.+||+|||++.......
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 996 58888887643 24899999999999999999999999 999999999999999 999999999997653322
Q ss_pred ceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--------HHHHHhcch
Q 005355 547 THLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF--------LEAMKENRL 617 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~ 617 (700)
. .....++..|+|||++.. ..++.++||||||+++|||++|..||...+..+........ .........
T Consensus 154 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07831 154 P--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRH 231 (282)
T ss_pred C--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccc
Confidence 1 223457889999997644 56788999999999999999999999765543211111000 000000000
Q ss_pred hhhcchhh----hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 FEVLDARV----LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ~~~~d~~~----~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.....+.. ........+..+.+|+.+||+.+|++||+++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 232 MNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00000000 00111234678999999999999999999999986
No 317
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.2e-33 Score=290.43 Aligned_cols=249 Identities=25% Similarity=0.386 Sum_probs=199.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-----ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--Ccc
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-----DESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVP 461 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 461 (700)
.+|++.+.||+|+||.||+|... +++.||+|.+... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 57899999999999999999975 5889999986432 233456889999999999999999999998764 457
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++++||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999997543 3889999999999999999999999 99999999999999999999999999986
Q ss_pred cccCC--ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 542 VMIDQ--THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 542 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
..... ........++..|+|||++.+..++.++||||||+++++|++|+.||......+ ...+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~----- 224 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA------AIFKIATQ----- 224 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH------HHHHHHcC-----
Confidence 53211 111223458889999999998889999999999999999999999997543221 11111111
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
......+......+.+++.+||+ +|..||++.+++.
T Consensus 225 ----~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 225 ----PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11122344556778999999999 5799999998875
No 318
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.1e-33 Score=303.59 Aligned_cols=263 Identities=23% Similarity=0.319 Sum_probs=200.2
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC------
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLET------ 458 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 458 (700)
..++|+..+.||+|+||.||++... +++.||||++.. ......+.+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4588999999999999999999975 689999998764 2344456788999999999999999999988644
Q ss_pred CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCC
Q 005355 459 EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGA 538 (700)
Q Consensus 459 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl 538 (700)
...++||||+. ++|.+.+... +++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence 34689999995 5888888643 788999999999999999999999 99999999999999999999999999
Q ss_pred CcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHH--------HHHH
Q 005355 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG--------YFLE 610 (700)
Q Consensus 539 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~--------~~~~ 610 (700)
++...... ......++..|+|||.+.+..++.++||||||+++++|++|+.||...+......... .+..
T Consensus 165 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 165 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred ceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 97653221 2233457889999999999999999999999999999999999997654321100000 0000
Q ss_pred --------HHHhcc------hhhhcchhh----hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 611 --------AMKENR------LFEVLDARV----LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 611 --------~~~~~~------~~~~~d~~~----~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...... +........ ...........+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000 000000000 000012345568899999999999999999999963
No 319
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.3e-34 Score=293.42 Aligned_cols=247 Identities=27% Similarity=0.336 Sum_probs=203.6
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
+|++.+.||+|+||.||++... +++.||+|.+... .....+.+.+|++++++++||||+++++.+.+.+..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5788999999999999999976 5889999987642 22456789999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+.+++|.+++... .++++..+..++.||++||.|||+++ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999999765 24899999999999999999999999 9999999999999999999999999987654332
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
......++..|+|||.+.+..++.++|+||||+++|+|++|..||........ ..+...... ..
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~----------~~ 218 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR----DQIRAKQET----------AD 218 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH----HHHHHHhcc----------cc
Confidence 22345588899999999988899999999999999999999999986654211 111111111 00
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCH--HHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTM--KEAA 659 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~--~evl 659 (700)
...+...+..+.+++.+||+.+|.+||++ +|++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 11222344678899999999999999999 5544
No 320
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=8.2e-34 Score=289.70 Aligned_cols=250 Identities=30% Similarity=0.417 Sum_probs=206.8
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|++.+.||.|+||.||++.+. +++.|++|++.... ....+.+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5788899999999999999976 68899999987543 35667889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
+++++|.+++.... ....+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998753 1235899999999999999999999999 9999999999999999999999999997654332
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.......+++.|+|||.+....++.++||||||+++++|++|..||......+ ..........
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~--------- 220 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-------LALKILKGQY--------- 220 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-------HHHHHhcCCC---------
Confidence 23334568889999999998899999999999999999999999996554221 1111111111
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...+......+.+++.+||..+|++||++.|+++
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1112234457889999999999999999999986
No 321
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.3e-33 Score=288.11 Aligned_cols=250 Identities=27% Similarity=0.444 Sum_probs=206.6
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC--CcceEEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLET--EVPLLVY 465 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 465 (700)
+|+..+.||+|++|.||+|... +++.|++|.+.... ....+.+.+|++++++++|+||+++++.+.+. ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999987 68899999877544 25568899999999999999999999999988 8899999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++++|.+++.... .+++..++.++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999998764 4999999999999999999999999 999999999999999999999999998766443
Q ss_pred Cce-eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 546 QTH-LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 546 ~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
... ......++..|+|||.+.....+.++||||||+++++|++|..||....... ....... ...
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~---------~~~ 220 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM-----AALYKIG---------SSG 220 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-----HHHHhcc---------ccC
Confidence 221 1233558889999999998889999999999999999999999997655111 1111111 001
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.....+...+..+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 221 EPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 111222334678999999999999999999999986
No 322
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5.6e-34 Score=291.00 Aligned_cols=249 Identities=27% Similarity=0.395 Sum_probs=206.2
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|++.+.||+|+||.||+++.. +++.+++|.+... .......+.+|++++++++|+||+++++.+.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4788899999999999999865 6789999987653 334456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQTE-EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
+++++|.+++.+... ...+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999876321 235899999999999999999999999 999999999999999999999999999765433
Q ss_pred ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 547 THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
......++..|++||.+.+..++.++|+||||+++++|++|+.||...+..+ +......+..
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~--------- 218 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD-------LRYKVQRGKY--------- 218 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHhcCCC---------
Confidence 2223457889999999999999999999999999999999999997654332 1111222211
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.........++.+++.+||+.+|++||++.++++.
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 12223455678999999999999999999999863
No 323
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2e-33 Score=296.91 Aligned_cols=251 Identities=27% Similarity=0.411 Sum_probs=199.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
..|+..+.||+|+||.||+++.. ++..||+|++... .....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34778889999999999999965 6889999987642 2334567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+. |+|.+++..... ++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++.....
T Consensus 105 e~~~-g~l~~~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~- 177 (317)
T cd06635 105 EYCL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP- 177 (317)
T ss_pred eCCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC-
Confidence 9996 588888765432 4899999999999999999999999 99999999999999999999999998865432
Q ss_pred Cceeeeeeecccccccccccc---cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 546 QTHLTTRVQGTFGYLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
.....++..|+|||++. ...++.++||||||+++|||++|..||......+. .. .+.....
T Consensus 178 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~-~~~~~~~----- 241 (317)
T cd06635 178 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LY-HIAQNES----- 241 (317)
T ss_pred ----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH------HH-HHHhccC-----
Confidence 12345788999999974 45688999999999999999999999865432211 01 1111110
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
........+..+.+|+.+||+.+|.+||++.++++.+-.+.
T Consensus 242 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 242 ---PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ---CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 01112234556889999999999999999999998664433
No 324
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-35 Score=295.03 Aligned_cols=246 Identities=26% Similarity=0.339 Sum_probs=205.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
.+.|+.-++||+|+||.|+-.+.+ .|+.+|.|++... ........++|-.||.+++.+.||.+-.++...+.++||
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 467888899999999999999866 6999999976532 223345578899999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
+..|.||+|.-+|..... ..+++..++.++.+|+-||.+||+.+ ||+||+||+|||||+.|+++|+|+||+..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999988764 34999999999999999999999999 99999999999999999999999999987754
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
... ....+||.+|||||++.+..|+...|.|||||+||||+.|+.||........ .+-+|.+
T Consensus 340 g~~--~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk----------------~eEvdrr 401 (591)
T KOG0986|consen 340 GKP--IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK----------------REEVDRR 401 (591)
T ss_pred CCc--cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh----------------HHHHHHH
Confidence 443 3334799999999999999999999999999999999999999975432211 1112222
Q ss_pred h---hhccCHHHHHHHHHHHHHHhccCCCCCCCHH
Q 005355 625 V---LKEAKEEEIITVAMLAKRCLNMIGKKRPTMK 656 (700)
Q Consensus 625 ~---~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~ 656 (700)
+ ..+++...+++..+|.+..|+.||++|.--+
T Consensus 402 ~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 402 TLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred HhcchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 2 1234556677888999999999999996543
No 325
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=9.1e-34 Score=298.24 Aligned_cols=266 Identities=23% Similarity=0.321 Sum_probs=197.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc-----
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEV----- 460 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 460 (700)
.++|++.++||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 467999999999999999999976 68899999875432 2223456789999999999999999999876544
Q ss_pred ---ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 461 ---PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 461 ---~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
.++||||+. ++|.+++..... .+++..++.++.||+.||+|||+++ ++|+||||+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCC
Confidence 489999996 588888865432 3899999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCce---eeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH
Q 005355 538 ASRSVMIDQTH---LTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613 (700)
Q Consensus 538 l~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 613 (700)
++......... ......++..|+|||.+.+. .++.++||||||+++|||++|..||..............+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99765432221 11234577889999988664 478899999999999999999999976654332222221110000
Q ss_pred hcchhhh-----cc---------hhhhhcc-CHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 614 ENRLFEV-----LD---------ARVLKEA-KEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 614 ~~~~~~~-----~d---------~~~~~~~-~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...+... .+ ....... .......+.+|+.+||+.+|.+|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000000 00 0000000 0011245678999999999999999999985
No 326
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.4e-33 Score=289.42 Aligned_cols=242 Identities=27% Similarity=0.326 Sum_probs=196.2
Q ss_pred EeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 398 LGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
||.|+||.||+++.. .++.|++|.+.... ....+.+.+|++++++++|+||+++++.+.+.+..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999976 48899999876422 23457799999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeee
Q 005355 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553 (700)
Q Consensus 474 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~ 553 (700)
.+++.+.. .+++..+..++.||+.||+|||+++ ++|+||+|+||+++.++.+||+|||++....... .....
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~ 152 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTF 152 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccc
Confidence 99997653 3899999999999999999999999 9999999999999999999999999998654332 22334
Q ss_pred ecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHH
Q 005355 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEE 633 (700)
Q Consensus 554 ~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 633 (700)
.++..|++||.+....++.++|+||||+++|+|++|..||.....+. ......... .......+...
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~---------~~~~~~~~~~~ 219 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIYNDILK---------GNGKLEFPNYI 219 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHHHHHhc---------cCCCCCCCccc
Confidence 57889999999988889999999999999999999999997655311 111111110 00001112223
Q ss_pred HHHHHHHHHHHhccCCCCCCC-----HHHHHH
Q 005355 634 IITVAMLAKRCLNMIGKKRPT-----MKEAAF 660 (700)
Q Consensus 634 ~~~l~~li~~cl~~~p~~RPs-----~~evl~ 660 (700)
...+.+++.+||+.+|++||+ ++|+++
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 567899999999999999999 666665
No 327
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=7.4e-34 Score=294.75 Aligned_cols=259 Identities=25% Similarity=0.334 Sum_probs=202.1
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE--SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
|++.+.||+|++|.||++... +++.+++|++..... .....+.+|++++++++|+||+++++.+...+..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999975 688999998765432 34577889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
++ +|.+++.... ..+++..++.++.|+++||.|||+.+ ++|+||||+||+++.++.+||+|||.+....... .
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~ 153 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-R 153 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-c
Confidence 65 8888887643 24899999999999999999999999 9999999999999999999999999987664433 1
Q ss_pred eeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh---cchhhhcc--
Q 005355 549 LTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE---NRLFEVLD-- 622 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d-- 622 (700)
......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...+..+.... ....... ..+....+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK---IFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHcCCCchHhcccchhhh
Confidence 22234577889999998876 789999999999999999999999976554322111 1110000 00000000
Q ss_pred -----------hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 623 -----------ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 623 -----------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..............+.+++.+||+.+|.+||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00001112345678999999999999999999999986
No 328
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=9.8e-34 Score=295.56 Aligned_cols=243 Identities=26% Similarity=0.402 Sum_probs=199.2
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHH
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLY 474 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 474 (700)
.+||+|+||.||++... +++.||||++........+.+.+|+.+++.++|+|++++++.+...+..+++|||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 57999999999999975 68999999987655556678999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeeee
Q 005355 475 QYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQ 554 (700)
Q Consensus 475 ~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~~ 554 (700)
+++... .+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++....... .......
T Consensus 106 ~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~ 177 (292)
T cd06657 106 DIVTHT----RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLV 177 (292)
T ss_pred HHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccc
Confidence 988643 2899999999999999999999999 9999999999999999999999999887553322 1223345
Q ss_pred cccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHH
Q 005355 555 GTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEI 634 (700)
Q Consensus 555 gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 634 (700)
++..|+|||.+.+..++.++|+||||+++|+|++|..||......+. ........ ..... ......
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~-------~~~~~~~~-----~~~~~--~~~~~~ 243 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA-------MKMIRDNL-----PPKLK--NLHKVS 243 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHHhhC-----CcccC--CcccCC
Confidence 78899999999888899999999999999999999999975443221 11111110 00000 011234
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 635 ITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 635 ~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+.+++.+||+.+|.+||++.++++
T Consensus 244 ~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 244 PSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 56788999999999999999999988
No 329
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.1e-33 Score=295.50 Aligned_cols=262 Identities=21% Similarity=0.314 Sum_probs=198.4
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++|++.+.||+|++|.||+|..+ +++.||+|++.... ....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57889999999999999999976 68899999876432 2334678899999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC-CCcEEEeecCCCcccccC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGASRSVMID 545 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~-~~~~kl~DfGl~~~~~~~ 545 (700)
|++ ++|.+++..... ..+++..+..++.||+.||+|||+++ ++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 995 588888765432 23688889999999999999999999 999999999999985 567999999999754322
Q ss_pred Cceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc---chh---
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN---RLF--- 618 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~--- 618 (700)
. .......+++.|+|||++.+ ..++.++||||||+++|+|++|..||......+... ......... .+.
T Consensus 157 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 232 (294)
T PLN00009 157 V-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELF---KIFRILGTPNEETWPGVT 232 (294)
T ss_pred c-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHhCCCChhhccccc
Confidence 1 11223456889999999876 457899999999999999999999997654322111 111110000 000
Q ss_pred ---------hhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 619 ---------EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 619 ---------~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..................+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000001111233556889999999999999999999986
No 330
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2e-33 Score=286.39 Aligned_cols=247 Identities=28% Similarity=0.446 Sum_probs=204.4
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE--SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+|++.+.||+|++|.||+++.. +++.|++|.+..... ...+.+.+|++++++++|+|++++++++.+.+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788899999999999999876 578999999876543 4567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 99999999997653 4899999999999999999999999 99999999999999999999999999986643332
Q ss_pred eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhh
Q 005355 548 HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLK 627 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 627 (700)
. .....++..|+|||.+.+...+.++|||+||+++++|++|..||........ ..... .... .
T Consensus 155 ~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~------~~~~~-~~~~---------~ 217 (254)
T cd06627 155 D-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA------LFRIV-QDDH---------P 217 (254)
T ss_pred c-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH------HHHHh-ccCC---------C
Confidence 1 2334578899999999888889999999999999999999999975432111 11111 1110 1
Q ss_pred ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 628 EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 628 ~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+......+.+++.+||..+|++||++.+++.
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 112233567889999999999999999999875
No 331
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.8e-34 Score=303.30 Aligned_cols=266 Identities=22% Similarity=0.328 Sum_probs=200.6
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEe----CCcc
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLE----TEVP 461 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 461 (700)
.++|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++++++|+||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 478999999999999999999975 68999999876532 2345678889999999999999999988763 3457
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++|+||+. ++|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence 89999995 68999987543 3899999999999999999999999 99999999999999999999999999876
Q ss_pred cccCCce---eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH--------
Q 005355 542 VMIDQTH---LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL-------- 609 (700)
Q Consensus 542 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~-------- 609 (700)
....... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||................
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 5332211 1223468889999999865 568899999999999999999999997654332211111000
Q ss_pred HHHHhcchhhhcch------hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 610 EAMKENRLFEVLDA------RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 610 ~~~~~~~~~~~~d~------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.......+.+..+. ..........+..+.+++++||+.+|++||++.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000000000000 00001112345679999999999999999999998873
No 332
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.5e-33 Score=292.21 Aligned_cols=242 Identities=22% Similarity=0.295 Sum_probs=188.6
Q ss_pred eEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhh---cCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 397 ILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQ---INHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
+||+|+||.||++... +++.+|+|.+.... ......+.+|..+++. .+|+|++.+++.+...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999975 58899999875421 2222334455544444 479999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+++|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--- 151 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence 999999987653 3999999999999999999999999 9999999999999999999999999987543221
Q ss_pred eeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 550 TTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
.....++..|+|||.+.+ ..++.++||||||+++++|++|..||.......... ...... .. ...
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~~------~~----~~~ 217 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTL------TV----NVE 217 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH----HHHHhh------cC----CcC
Confidence 123458999999999864 568899999999999999999999997554322111 000000 00 111
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRP-----TMKEAAFE 661 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~~ 661 (700)
.+...+..+.+++.+||+.||.+|| +++|+++.
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 2334556788999999999999999 59888874
No 333
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.1e-33 Score=294.60 Aligned_cols=255 Identities=26% Similarity=0.366 Sum_probs=195.8
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E 466 (700)
++|...+.||+|+||.||++... +++.||+|++.... ......+.+|+.++.++. |+||+++++++...+..+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 34556788999999999999976 58999999876432 344567889999999996 9999999999999999999999
Q ss_pred eCCCCCHHHHHhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 467 FIPNGTLYQYIHDQ--TEEFPITWEIRLRIAIEVSDALCYLHSA-ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 467 ~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
|+. ++|.++.... .....+++..+..++.|++.||+|||+. + ++||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 84 LMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 985 4655543211 1123489999999999999999999975 7 9999999999999999999999999987543
Q ss_pred cCCceeeeeeecccccccccccccC---CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRSS---QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
... ......++..|+|||++.+. .++.++||||||+++|+|++|+.||..... .......... +.
T Consensus 160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~-~~---- 227 (288)
T cd06616 160 DSI--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-----VFDQLTQVVK-GD---- 227 (288)
T ss_pred cCC--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-----HHHHHhhhcC-CC----
Confidence 222 12233578899999999776 688999999999999999999999975431 1111111111 10
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.+.+........+..+.+|+.+||+.+|++|||++++++.
T Consensus 228 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 228 -PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111112223356678999999999999999999999874
No 334
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.4e-33 Score=292.16 Aligned_cols=244 Identities=25% Similarity=0.296 Sum_probs=193.9
Q ss_pred EeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 398 LGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
||+|+||+||++... +++.||+|.+.... ......+.+|++++++++||||+++++.+...+..++|+||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 68899999875422 23345678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeee
Q 005355 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553 (700)
Q Consensus 474 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~ 553 (700)
.+++..... ..+++..++.++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||++..... .......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~ 154 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKG--GKKIKGR 154 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhcc--CCccccc
Confidence 999976543 34899999999999999999999999 99999999999999999999999999875432 1222334
Q ss_pred ecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHH
Q 005355 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEE 633 (700)
Q Consensus 554 ~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 633 (700)
.++..|+|||++.+..++.++||||||+++++|++|+.||........... +.... .. .....+...
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~----~~------~~~~~~~~~ 221 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEE---LKRRT----LE------MAVEYPDKF 221 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHH---HHhcc----cc------ccccCCccC
Confidence 578899999999888899999999999999999999999976543211110 00000 00 011122234
Q ss_pred HHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 634 IITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 634 ~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
...+.+++.+||+.+|.+|| ++.++++
T Consensus 222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 56788999999999999999 5555554
No 335
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=8.4e-34 Score=302.46 Aligned_cols=266 Identities=27% Similarity=0.363 Sum_probs=200.5
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeC--Ccc
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQI-NHRNVVKLLGCCLET--EVP 461 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~ 461 (700)
..++|++.+.||+|+||.||+|.+. +++.+|||++.. ........+.+|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3578889999999999999999976 588999998753 2334456678899999999 999999999998654 357
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++||||++ ++|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999996 5999988764 3889999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCc----eeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH-------
Q 005355 542 VMIDQT----HLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL------- 609 (700)
Q Consensus 542 ~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~------- 609 (700)
...... .......++..|+|||++.+ ..++.++||||||+++|+|++|+.||......+.........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 643322 12233458889999998765 567889999999999999999999997654332111110000
Q ss_pred -HHHHhcchhhhcch------hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 610 -EAMKENRLFEVLDA------RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 610 -~~~~~~~~~~~~d~------~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..+.......+++. ..........+..+.+++.+||+.+|.+|||+.++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000000000 00001111245678999999999999999999999974
No 336
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.3e-33 Score=294.04 Aligned_cols=256 Identities=24% Similarity=0.289 Sum_probs=202.3
Q ss_pred CCCccceEeeeCCeEEEEEEEc----CCcEEEEEEccccC----hhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcc
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT----NGRIVAIKKSKLVD----ESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 461 (700)
+|++.+.||+|+||.||+++.. +++.||||.++... ....+.+.+|++++.++ +|+||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4778899999999999999853 46889999876422 22346688999999999 599999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++||||+++++|.+++.... .+++..+..++.|+++||+|||+.+ ++||||+|+||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999999987543 3889999999999999999999999 99999999999999999999999999876
Q ss_pred cccCCceeeeeeecccccccccccccCC--CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 542 VMIDQTHLTTRVQGTFGYLDPEYFRSSQ--FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 542 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
.............++..|+|||.+.+.. .+.++||||||++++||++|..||........ .. .........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~-~~~~~~~~~---- 227 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS--QS-EISRRILKS---- 227 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch--HH-HHHHHHHcc----
Confidence 5444333333455889999999987755 78899999999999999999999964332111 00 111111100
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
. ...+......+.+++.+||+.+|++|||++++.+.|+..
T Consensus 228 --~----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 228 --K----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred --C----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 111223445688999999999999999999888877553
No 337
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.4e-34 Score=303.04 Aligned_cols=270 Identities=27% Similarity=0.350 Sum_probs=207.6
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC-----cce
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETE-----VPL 462 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 462 (700)
+|++.+.||+|+||.||+++.. .++.||||++.... ....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999976 48999999877543 445578999999999999999999999988775 789
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
++|||++ ++|.+++.... .+++..++.++.||+.||+|||+.+ |+|+||||+|||++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 58999887643 4999999999999999999999999 999999999999999999999999999865
Q ss_pred ccCCc--eeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH------
Q 005355 543 MIDQT--HLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK------ 613 (700)
Q Consensus 543 ~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 613 (700)
..... .......++..|+|||++.+. .++.++||||||+++++|++|..||......+.............
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 233 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhh
Confidence 43321 122334578899999999887 889999999999999999999999987664332111111000000
Q ss_pred --hcchhhhcc------hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH--HHhchh
Q 005355 614 --ENRLFEVLD------ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE--LGGIRA 667 (700)
Q Consensus 614 --~~~~~~~~d------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~--L~~l~~ 667 (700)
.......+. ...........+..+.+++.+||+.+|++||+++++++. |++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 000000000 000001112245678899999999999999999999984 665554
No 338
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=320.64 Aligned_cols=265 Identities=28% Similarity=0.449 Sum_probs=219.2
Q ss_pred HHHHHhcCCCccceEeeeCCeEEEEEEEc----C----CcEEEEEEccc-cChhhHHHHHHHHHHHhhc-CCCceeeEEe
Q 005355 384 ELEMATDNFNTNRILGQGGQGTVYKGMLT----N----GRIVAIKKSKL-VDESNIEQFINEVAILSQI-NHRNVVKLLG 453 (700)
Q Consensus 384 e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~----~----~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 453 (700)
.++...++..+.+.||+|.||.|++|... . ...||||.++. ....+.+.+..|+++|+.+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 56777777788889999999999999844 1 34699999875 3446678999999999998 6999999999
Q ss_pred EEEeCCcceEEEeeCCCCCHHHHHhccC-C----------C--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 005355 454 CCLETEVPLLVYEFIPNGTLYQYIHDQT-E----------E--FPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKS 520 (700)
Q Consensus 454 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~-~----------~--~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~ 520 (700)
++......++|.||+..|+|.++|+..+ . . ..++...++.++.|||.||+||++.. ++||||..
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhh
Confidence 9999999999999999999999998876 0 0 13889999999999999999999999 99999999
Q ss_pred CcEEECCCCcEEEeecCCCcccccCCceeeeeeec--ccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCC
Q 005355 521 ANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQG--TFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTD 597 (700)
Q Consensus 521 ~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~ 597 (700)
+||||+++..+||+|||+++..............+ +..|||||.+....|+.|+||||||++||||++ |..||.+..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 99999999999999999999765555544333332 456999999999999999999999999999999 889997643
Q ss_pred chhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 598 SEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
..++ +.+.++.+.. .+.+.....++.++++.||+.+|++||++.++.+.|+.+.
T Consensus 527 ~~~~------l~~~l~~G~r---------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 527 PTEE------LLEFLKEGNR---------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred cHHH------HHHHHhcCCC---------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 2221 1223333332 2334455778889999999999999999999999999953
No 339
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-35 Score=283.02 Aligned_cols=244 Identities=25% Similarity=0.343 Sum_probs=205.2
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcc
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 461 (700)
++..++|..+++||+|.||+|.+.+.+ .++.+|+|+++. ........-+.|-++|+..+||.+..+.-.|...+..
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 345688999999999999999999965 789999998875 3344556677899999999999999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++||||..+|.|.-+|.+.+ .+++.....+..+|+.||.|||+++ ||.||||.+|.|+|.+|++||+||||++.
T Consensus 244 CFVMeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred EEEEEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchh
Confidence 99999999999999998754 3899999999999999999999999 99999999999999999999999999986
Q ss_pred cccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 542 VMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 542 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
-. .......+.+||+.|+|||++....|..++|.|.+||++|||++|+.||...+.+.. ...+-.
T Consensus 318 ~I-~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL-------FeLIl~------- 382 (516)
T KOG0690|consen 318 EI-KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL-------FELILM------- 382 (516)
T ss_pred cc-cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH-------HHHHHh-------
Confidence 43 334456678999999999999999999999999999999999999999976654331 111111
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCC
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRP 653 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP 653 (700)
.. -.++....++...|+..+|..||.+|.
T Consensus 383 -ed--~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 383 -ED--LKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -hh--ccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 11 122344455677799999999999995
No 340
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.2e-34 Score=291.08 Aligned_cols=245 Identities=28% Similarity=0.370 Sum_probs=198.3
Q ss_pred EeeeCCeEEEEEEEc-CCcEEEEEEccccCh---hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 398 LGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE---SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
||+|+||.||++.+. +++.+++|.+..... ...+.+.+|++++++++|+||+++++.+......++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999987 489999998765433 4567889999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc------
Q 005355 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT------ 547 (700)
Q Consensus 474 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~------ 547 (700)
.+++.+.. .+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99998654 3899999999999999999999999 99999999999999999999999999875433211
Q ss_pred -eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhh
Q 005355 548 -HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVL 626 (700)
Q Consensus 548 -~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 626 (700)
.......++..|+|||.+.....+.++||||||+++++|++|..||......+. ......+.... .
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~~------~ 221 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI-------FQNILNGKIEW------P 221 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-------HHHHhcCCcCC------C
Confidence 122334578899999999888899999999999999999999999975543221 11111111100 0
Q ss_pred hccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 627 KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELG 663 (700)
Q Consensus 627 ~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~ 663 (700)
. ....+..+.+++.+||+.+|++|||+.++.+.|+
T Consensus 222 ~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 222 E--DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred c--cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0 0112567889999999999999999966666553
No 341
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.6e-33 Score=297.49 Aligned_cols=267 Identities=20% Similarity=0.291 Sum_probs=198.2
Q ss_pred ceEeee--CCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQG--GQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G--~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
+.||+| +||+||++++. .++.||+|+.... .....+.+.+|+.+++.++|+||+++++++...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 89999999975 6899999987643 334457889999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee-
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL- 549 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~- 549 (700)
++|.+++...... .+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+|++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 84 GSANSLLKTYFPE-GMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 9999999865322 3899999999999999999999999 9999999999999999999999998654322111110
Q ss_pred -----eeeeecccccccccccccC--CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH-------------
Q 005355 550 -----TTRVQGTFGYLDPEYFRSS--QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL------------- 609 (700)
Q Consensus 550 -----~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~------------- 609 (700)
.....++..|+|||++.+. .++.++||||||+++|||++|..||......+.. .....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 237 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML--LQKLKGPPYSPLDITTFP 237 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH--HHHhcCCCCCCccccccc
Confidence 0112245679999999763 4789999999999999999999999765432210 00000
Q ss_pred ---HHHH----------------hcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH--HHHhchhh
Q 005355 610 ---EAMK----------------ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF--ELGGIRAS 668 (700)
Q Consensus 610 ---~~~~----------------~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~--~L~~l~~~ 668 (700)
.... .+......+..+...........+.+|+++||+.||++|||++|+++ .++++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 0000 00000011111111223345678999999999999999999999985 45555554
No 342
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=306.62 Aligned_cols=272 Identities=26% Similarity=0.387 Sum_probs=208.8
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC------CcceE
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL-VDESNIEQFINEVAILSQINHRNVVKLLGCCLET------EVPLL 463 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~l 463 (700)
+...+.||+|+||.||+|+.+ .|+.||||.+.. ......+..-+|+++|++++|+|||+++++-.+. ..+++
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 455678999999999999965 799999998775 3344567889999999999999999999986543 46789
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC----CCCcEEEeecCCC
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD----DKYRAKVSDFGAS 539 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~----~~~~~kl~DfGl~ 539 (700)
||||+.+|+|...|.+..+...|++.+++.++.++..||.|||.++ |+||||||.||++- ....-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999999998777777999999999999999999999999 99999999999993 3345799999999
Q ss_pred cccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchh
Q 005355 540 RSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF 618 (700)
Q Consensus 540 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (700)
+.+.. ........||..|++||++.. ..|+..+|.||||+++|+.+||..||.............|....-+..-..
T Consensus 172 rel~d--~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~ 249 (732)
T KOG4250|consen 172 RELDD--NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVA 249 (732)
T ss_pred ccCCC--CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCcee
Confidence 97743 336778889999999999995 788999999999999999999999997665443222222221111110000
Q ss_pred hhcchhh------------hhccCHHHHHHHHHHHHHHhccCCCCCC--CHHHHHHHHHhchhh
Q 005355 619 EVLDARV------------LKEAKEEEIITVAMLAKRCLNMIGKKRP--TMKEAAFELGGIRAS 668 (700)
Q Consensus 619 ~~~d~~~------------~~~~~~~~~~~l~~li~~cl~~~p~~RP--s~~evl~~L~~l~~~ 668 (700)
-...+.. ...........+...+..+|..+|++|- ...+....+..|...
T Consensus 250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 0000000 1112233444566788888999999998 666666666665543
No 343
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.8e-33 Score=286.94 Aligned_cols=243 Identities=27% Similarity=0.304 Sum_probs=191.4
Q ss_pred ceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHH-hhcCCCceeeEEeEEEeCCcceEEEeeCCC
Q 005355 396 RILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAIL-SQINHRNVVKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 470 (700)
+.||+|+||.||+|... +++.||||.+.... ......+..|..++ ...+|+|++++++.+...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999975 58899999876432 22233445555544 445899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
++|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++..... .
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~ 150 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----N 150 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-----c
Confidence 99999997643 3899999999999999999999999 99999999999999999999999998875432 2
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
....++..|+|||.+.+..++.++||||||+++++|++|..||......+. ...+..+... ......
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~------~~~~~~ 217 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV-------FDNILSRRIN------WPEEVK 217 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH-------HHHHHhcccC------CCCccc
Confidence 234578899999999888899999999999999999999999975543221 1111111110 001111
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 631 EEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 631 ~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
...+..+.+++.+||+.+|++||++.++.+.|
T Consensus 218 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 23456789999999999999999887666544
No 344
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6e-33 Score=288.53 Aligned_cols=259 Identities=27% Similarity=0.382 Sum_probs=197.5
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhc---CCCceeeEEeEEEeCCc-----
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQI---NHRNVVKLLGCCLETEV----- 460 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 460 (700)
|++.+.||+|+||.||+|+++ +++.||+|++.... ......+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999987 48999999886432 22235567788877766 59999999999988776
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.+++|||+. ++|.+++..... ..+++..++.++.|+++||+|||+.+ ++|+||+|+||+++.++.+||+|||++.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence 899999996 589998876432 24899999999999999999999999 9999999999999999999999999987
Q ss_pred ccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc-c--h
Q 005355 541 SVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN-R--L 617 (700)
Q Consensus 541 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~--~ 617 (700)
....... .....++..|+|||++.+..++.++||||||+++|||++|.+||......+. ...+.+..... . +
T Consensus 156 ~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 230 (287)
T cd07838 156 IYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ---LDKIFDVIGLPSEEEW 230 (287)
T ss_pred eccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH---HHHHHHHcCCCChHhc
Confidence 6533221 2233478899999999999999999999999999999999999876543321 11111111000 0 0
Q ss_pred ----------hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 ----------FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ----------~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...................+.+++.+||+.+|.+||+++|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 231 PRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000011112244567889999999999999999999985
No 345
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.1e-33 Score=291.48 Aligned_cols=251 Identities=25% Similarity=0.316 Sum_probs=197.5
Q ss_pred CCCccceEeeeCCeEEEEEEEc----CCcEEEEEEccccC----hhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcc
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT----NGRIVAIKKSKLVD----ESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 461 (700)
+|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.+++++ +|+||+++++.+......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4788899999999999999863 68899999876432 22346788999999999 599999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++|+||+++++|.+++.... .+++..+..++.|+++||.|||+.+ ++||||+|+|||++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999997653 3889999999999999999999999 99999999999999999999999999976
Q ss_pred cccCCceeeeeeecccccccccccccC--CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 542 VMIDQTHLTTRVQGTFGYLDPEYFRSS--QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 542 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
.............++..|+|||.+... .++.++||||||+++|+|++|..||........ ... .........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~-~~~~~~~~~--- 228 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS--QAE-ISRRILKSE--- 228 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc--HHH-HHHHhhccC---
Confidence 543332223345588999999998753 467899999999999999999999964322111 111 111111000
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
...+......+.+++.+||+.+|++|| ++++++.
T Consensus 229 -------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 -------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 011223456788999999999999997 6666655
No 346
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.3e-33 Score=293.09 Aligned_cols=250 Identities=26% Similarity=0.375 Sum_probs=198.4
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
+.|+..+.||+|+||.||+|+.. +++.+|+|.+.. ......+++.+|+++++.++|+|++++++++...+..++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 44667789999999999999975 578899998753 23344567889999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+. ++|.+++..... .+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9996 688888765432 3899999999999999999999999 999999999999999999999999998754322
Q ss_pred Cceeeeeeecccccccccccc---cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 546 QTHLTTRVQGTFGYLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
....++..|+|||++. ...++.++||||||+++|+|++|..||......+.. .....+..
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~~----- 231 (308)
T cd06634 169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-------YHIAQNES----- 231 (308)
T ss_pred -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH-------HHHhhcCC-----
Confidence 2345788999999974 356788999999999999999999998654322211 01111111
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
...........+.+|+.+||+.+|++||++.++++..--+
T Consensus 232 ---~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 232 ---PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred ---CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence 0111223455688999999999999999999999865433
No 347
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.9e-33 Score=298.12 Aligned_cols=269 Identities=23% Similarity=0.299 Sum_probs=200.8
Q ss_pred chHHHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 005355 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLE 457 (700)
Q Consensus 381 ~~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 457 (700)
...++...+++|.+.+.||+|+||.||++... +++.||+|++... .....+.+.+|+.++++++|+||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 34556777899999999999999999999864 6889999988643 23335678899999999999999999998864
Q ss_pred C------CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcE
Q 005355 458 T------EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRA 531 (700)
Q Consensus 458 ~------~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~ 531 (700)
. ...+++++++ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCE
Confidence 3 3357788876 78998888653 2899999999999999999999999 9999999999999999999
Q ss_pred EEeecCCCcccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--
Q 005355 532 KVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF-- 608 (700)
Q Consensus 532 kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~-- 608 (700)
||+|||++..... ......++..|+|||.+.+ ..++.++||||||+++++|++|+.||...............
T Consensus 160 kl~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 235 (345)
T cd07877 160 KILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 235 (345)
T ss_pred EEecccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 9999999875422 1223457889999999876 56888999999999999999999999755432211110000
Q ss_pred ------HHHHHhcch---hhhcchhh---hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 609 ------LEAMKENRL---FEVLDARV---LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 609 ------~~~~~~~~~---~~~~d~~~---~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
...+..... ...+.... ..+........+.+++.+||+.+|.+||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 236 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000000 00000000 000001134568899999999999999999999874
No 348
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=298.51 Aligned_cols=249 Identities=26% Similarity=0.360 Sum_probs=209.9
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceE
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 463 (700)
.....|.+.+.||+|.|++|.+|++. .+..||||.+.. .+...+..+.+|+++|+.++|||||+++.+......+++
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 34678999999999999999999965 689999998775 334455679999999999999999999999999999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
||||..+|.+++++.+... +.+..+..++.|++.|++|||++. |+|||||++||||+.+.++||+|||++..+.
T Consensus 133 V~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeec
Confidence 9999999999999988765 667888999999999999999999 9999999999999999999999999998653
Q ss_pred cCCceeeeeeecccccccccccccCCC-CcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRSSQF-TEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
......+..|++.|.|||++.+..+ .+++|+||+|++||.|+.|..||++....+.. . +.+.
T Consensus 207 --~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr-------~--------rvl~ 269 (596)
T KOG0586|consen 207 --YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR-------P--------RVLR 269 (596)
T ss_pred --ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc-------c--------hhee
Confidence 4455667789999999999998776 57999999999999999999999876543311 0 0111
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+ ..+.....+..+|++++|..+|.+|++++++.+
T Consensus 270 gk~--rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 270 GKY--RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred eee--cccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 111 122334456778999999999999999999876
No 349
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.5e-33 Score=292.07 Aligned_cols=260 Identities=18% Similarity=0.249 Sum_probs=193.0
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCC
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGT 472 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gs 472 (700)
.+.+|.|+++.|+++.. +++.||||++... .....+.+.+|++++++++|+||+++++++.+.+..+++|||+++++
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34445555555555544 5899999997653 45566789999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc-----
Q 005355 473 LYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT----- 547 (700)
Q Consensus 473 L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~----- 547 (700)
|.+++..... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.+........
T Consensus 86 l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 86 CEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred HHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 9999986532 23889999999999999999999999 99999999999999999999999998865432211
Q ss_pred -eeeeeeeccccccccccccc--CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHH----Hhcc----
Q 005355 548 -HLTTRVQGTFGYLDPEYFRS--SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAM----KENR---- 616 (700)
Q Consensus 548 -~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----~~~~---- 616 (700)
.......++..|+|||++.. ..++.++||||||+++|||++|..||........ ..+...... ....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhh
Confidence 11123346778999999876 3588999999999999999999999975442211 111100000 0000
Q ss_pred ---hhh----hcch----hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 617 ---LFE----VLDA----RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 617 ---~~~----~~d~----~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
... ..+. .............+.+|+.+||+.+|++|||++++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000 0000 00111223345678899999999999999999999983
No 350
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.3e-33 Score=295.28 Aligned_cols=262 Identities=25% Similarity=0.331 Sum_probs=196.0
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC------
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE--SNIEQFINEVAILSQINHRNVVKLLGCCLETE------ 459 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 459 (700)
.++|++.++||+|+||.||+|.+. +++.+|||++..... .....+.+|++++++++|+||+++++.+.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999976 688999998754322 22346788999999999999999999876543
Q ss_pred --cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 460 --VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 460 --~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
..++|+||+.. +|...+.... ..+++..+..++.|+++||+|||+.+ |+|+||||+||++++++.+||+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence 35899999964 6777776543 24999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCce----------eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHH
Q 005355 538 ASRSVMIDQTH----------LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG 606 (700)
Q Consensus 538 l~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~ 606 (700)
++......... ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~- 239 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI- 239 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-
Confidence 99765322211 1123457888999998765 45889999999999999999999999765543221111
Q ss_pred HHHHHHHhc---------chhhh--------cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 607 YFLEAMKEN---------RLFEV--------LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 607 ~~~~~~~~~---------~~~~~--------~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
....... .+... ....+ ..........+.+++.+||+.+|++|||+.|++.
T Consensus 240 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 --FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTL-EERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred --HHHhCCCChhhchhhhhcccccccccCCCCCccH-HHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1110000 00000 00000 0001122356889999999999999999999875
No 351
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.2e-32 Score=290.35 Aligned_cols=244 Identities=27% Similarity=0.406 Sum_probs=194.9
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
|...+.||+|+||+||+|+.. +++.|++|++... .....+.+.+|+++++.++|+|++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 666778999999999999975 6889999987642 233446788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQT 547 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~ 547 (700)
+. ++|.+++..... ++++..++.++.||+.||+|||+.+ ++|+||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~~--~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 95 678888765432 4899999999999999999999999 99999999999999999999999998864321
Q ss_pred eeeeeeecccccccccccc---cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 548 HLTTRVQGTFGYLDPEYFR---SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 548 ~~~~~~~gt~~y~aPE~~~---~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
.....++..|+|||++. ...++.++||||||+++|+|++|..||...+..... ..... ....
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~------~~~~~-~~~~------ 238 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQ-NDSP------ 238 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHh-cCCC------
Confidence 22345888999999984 456888999999999999999999998755432211 11111 1110
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..........+.+|+.+||+.+|.+||++.+++..
T Consensus 239 --~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 239 --TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11112233468889999999999999999999863
No 352
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.1e-32 Score=283.93 Aligned_cols=246 Identities=22% Similarity=0.289 Sum_probs=191.0
Q ss_pred HHHhcCCCccceE--eeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcc
Q 005355 386 EMATDNFNTNRIL--GQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 386 ~~~~~~~~~~~~l--G~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 461 (700)
....++|++.+.+ |+|+||.||++..+ +++.+|+|.......... |+.....+ +|+|++++++.+...+..
T Consensus 10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 3334677777776 99999999999965 678899998764322111 22222223 799999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC-cEEEeecCCCc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGASR 540 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~-~~kl~DfGl~~ 540 (700)
++||||+++++|.+++.... .+++..+..++.|+++||.|||+.+ ++||||||+||+++.++ .++|+|||++.
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 99999999999999997653 4999999999999999999999999 99999999999999988 99999999987
Q ss_pred ccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 541 SVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 541 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
..... ....++..|+|||++.+..++.++||||||++++||++|..||......+ ..... +.... ..
T Consensus 159 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~-~~~~~-~~----- 225 (267)
T PHA03390 159 IIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLES-LLKRQ-QK----- 225 (267)
T ss_pred ecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHH-HHHhh-cc-----
Confidence 54322 12357889999999999899999999999999999999999997443222 11111 11111 00
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC-HHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT-MKEAAF 660 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs-~~evl~ 660 (700)
........+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 226 -----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 -----KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -----cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00112245567899999999999999996 688874
No 353
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-34 Score=254.03 Aligned_cols=264 Identities=23% Similarity=0.336 Sum_probs=203.4
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
.+|...++||+|.||+||+|+.. .++.||+|+....+ +.......+|+.+++.++|+|||++++....+....+|+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 35667789999999999999954 68899999876543 3345678999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
|+ .-+|..+...-+.. ++.+....++.|+++||.|.|+++ +.|||+||.|.||+.+|++|++|||+++.+...-
T Consensus 82 ~c-dqdlkkyfdslng~--~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 82 FC-DQDLKKYFDSLNGD--LDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred Hh-hHHHHHHHHhcCCc--CCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 99 45788887665443 899999999999999999999999 9999999999999999999999999999876543
Q ss_pred ceeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhh---c
Q 005355 547 THLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV---L 621 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 621 (700)
.- ......|..|.+|.++.+. -|+...|+||-|||+.||.. |++.|.+.+.++...-+-+.+....++.|..+ .
T Consensus 156 rc-ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 156 RC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred Ee-eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCC
Confidence 32 3345579999999999875 58889999999999999988 77777776654432222222222233333221 1
Q ss_pred chhhhhccC---------HHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 622 DARVLKEAK---------EEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 622 d~~~~~~~~---------~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
|-.....++ +.....-.+|+++.|.-+|.+|.++++.++
T Consensus 235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 111111111 112223567889999999999999998876
No 354
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=5.4e-33 Score=296.76 Aligned_cols=266 Identities=23% Similarity=0.345 Sum_probs=197.3
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC------
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETE------ 459 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 459 (700)
.++|...+.||+|+||.||+|... +++.||||++... .......+.+|+.+++.++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999965 6899999987642 2233456889999999999999999999987543
Q ss_pred cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
..++|+||+. .+|.+++.. .+++..+..++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMGH-----PLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEecccc-cCHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 3489999995 477766531 3899999999999999999999999 999999999999999999999999998
Q ss_pred cccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHH--------HHH
Q 005355 540 RSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGY--------FLE 610 (700)
Q Consensus 540 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~--------~~~ 610 (700)
+..... .....++..|+|||++.+ ..++.++||||||+++|||++|+.||.............. +..
T Consensus 165 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 165 RHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred cCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 754221 123457889999999876 4688999999999999999999999986543221100000 000
Q ss_pred HHHhcchhhhcch--hh-hh---ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH--HHhchh
Q 005355 611 AMKENRLFEVLDA--RV-LK---EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE--LGGIRA 667 (700)
Q Consensus 611 ~~~~~~~~~~~d~--~~-~~---~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~--L~~l~~ 667 (700)
............. .. .. .........+.+|+.+||+.||++||++.|++.. ++.++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0000000000000 00 00 0001234568899999999999999999999964 666653
No 355
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.9e-33 Score=288.76 Aligned_cols=262 Identities=25% Similarity=0.333 Sum_probs=197.5
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh-hhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcceEEEeeC
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE-SNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
|++.+.||+|+||+||+|+.. +++.|+||++..... .......+|+..+++++ |+|++++++.+.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 577889999999999999986 578899998764322 22334567999999998 999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
+++|.+++.... ...+++..++.++.|++.+|.|||+++ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-- 153 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-- 153 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC--
Confidence 889999987654 224899999999999999999999999 9999999999999999999999999997553221
Q ss_pred eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH----------HHHHHhcch
Q 005355 549 LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF----------LEAMKENRL 617 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~----------~~~~~~~~~ 617 (700)
......++..|+|||++.. ..++.++|+||||++++||++|+.||......+........ .........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 1223457889999998854 56789999999999999999999999766433211100000 000000000
Q ss_pred hhhcch---hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 FEVLDA---RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ~~~~d~---~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...+.. .............+.+++++||+.+|++||+++|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000 0001111122467899999999999999999999975
No 356
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.7e-33 Score=288.58 Aligned_cols=262 Identities=27% Similarity=0.356 Sum_probs=200.8
Q ss_pred CCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 392 FNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+..|+.++++++|+|++++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999976 58999999877643 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
+ ++|.+++.... ..+++..++.++.|++.||+|||+++ |+||||+|+||++++++.+||+|||++........
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 7 59999998753 23899999999999999999999999 99999999999999999999999999976543222
Q ss_pred eeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchh---------
Q 005355 549 LTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF--------- 618 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 618 (700)
......++..|+|||.+.+. .++.++||||||++++||++|..||......+................+.
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 22233467789999998776 88999999999999999999999997655332111110000000000000
Q ss_pred ---hhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 619 ---EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 619 ---~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..................+.+++.+||+.+|++||++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000000111122567999999999999999999999985
No 357
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.8e-33 Score=296.43 Aligned_cols=260 Identities=25% Similarity=0.337 Sum_probs=196.8
Q ss_pred cCCC-ccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhh--------------HHHHHHHHHHHhhcCCCceeeEEe
Q 005355 390 DNFN-TNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESN--------------IEQFINEVAILSQINHRNVVKLLG 453 (700)
Q Consensus 390 ~~~~-~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 453 (700)
++|. +.+.||+|+||.||+|... .++.||||+++...... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 4577999999999999976 68999999876432211 125778999999999999999999
Q ss_pred EEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEE
Q 005355 454 CCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKV 533 (700)
Q Consensus 454 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl 533 (700)
++...+..++||||++ ++|.+++.... .+++.....++.|++.||+|||+.+ ++|+||+|+||+++.++.+||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEE
Confidence 9999999999999996 69999987543 3899999999999999999999999 999999999999999999999
Q ss_pred eecCCCcccccCC-------------ceeeeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCch
Q 005355 534 SDFGASRSVMIDQ-------------THLTTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSE 599 (700)
Q Consensus 534 ~DfGl~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~ 599 (700)
+|||++....... ........++..|+|||++.+. .++.++||||||+++|||++|..||...+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999987654110 1111223467889999998764 4689999999999999999999999866543
Q ss_pred hhhhHHHHHHHHHHhcc---hhhh------------cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 600 EDKSLVGYFLEAMKENR---LFEV------------LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 600 ~~~~~~~~~~~~~~~~~---~~~~------------~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.. ..+........ +... ..... ..........+.+++.+||+.+|++||+++|++.
T Consensus 241 ~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 241 DQL---GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDL-KTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHH---HHHHHHhCCCchhhCcchhhcccccccCcCCcccH-HHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 221 11111111000 0000 00000 0111223456889999999999999999999986
No 358
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=6.2e-33 Score=294.37 Aligned_cols=264 Identities=22% Similarity=0.311 Sum_probs=199.5
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe-CCcc
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLE-TEVP 461 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 461 (700)
...+++|++.+.||+|+||.||++... +++.||||++.. ......+.+.+|++++++++||||+++++++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 346788999999999999999999966 789999998653 223345678899999999999999999999875 5678
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++++||+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||+|+||++++++.+||+|||++..
T Consensus 86 ~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccc
Confidence 8999998 56899888643 3788889999999999999999999 99999999999999999999999999875
Q ss_pred cccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--------HHHH
Q 005355 542 VMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF--------LEAM 612 (700)
Q Consensus 542 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~--------~~~~ 612 (700)
.... .....++..|+|||++.+ ..++.++||||||+++++|++|+.||............... ....
T Consensus 158 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 158 QDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred cCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 4221 122346888999999866 57899999999999999999999999765432211111100 0000
Q ss_pred Hhcchhhhcchh------hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 613 KENRLFEVLDAR------VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 613 ~~~~~~~~~d~~------~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
......+..... ...+........+.+++.+||+.+|++||++.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000000 0000011234678999999999999999999998764
No 359
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.5e-33 Score=299.32 Aligned_cols=261 Identities=25% Similarity=0.389 Sum_probs=196.4
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC---------
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLET--------- 458 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 458 (700)
..+|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++|+||+++++.+...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 478999999999999999999975 5889999998776666667899999999999999999999876543
Q ss_pred -----CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC-CCCcEE
Q 005355 459 -----EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-DKYRAK 532 (700)
Q Consensus 459 -----~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~-~~~~~k 532 (700)
...++|+||++ ++|.+++... .+++..+..++.||++||.|||+.+ |+||||||+||+++ +++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEE
Confidence 34689999996 5898888643 3899999999999999999999999 99999999999997 456789
Q ss_pred EeecCCCcccccCCce--eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH
Q 005355 533 VSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL 609 (700)
Q Consensus 533 l~DfGl~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 609 (700)
|+|||++......... ......++..|+|||.+.. ..++.++||||||+++|+|++|+.||......+..... .
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~---~ 232 (342)
T cd07854 156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLI---L 232 (342)
T ss_pred ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---H
Confidence 9999998754322111 1122357889999998654 56888999999999999999999999765432211110 0
Q ss_pred HHHHh------cchhhhcchhh----------hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 610 EAMKE------NRLFEVLDARV----------LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 610 ~~~~~------~~~~~~~d~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..... ........... ..........++.+|+.+||+.+|++|||++|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00000 00000000000 00011123456889999999999999999999985
No 360
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.9e-33 Score=288.79 Aligned_cols=248 Identities=27% Similarity=0.390 Sum_probs=203.3
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcceEE
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 464 (700)
++|.+.+.||+|+||.||+++.. +++.||+|+.... .....+.+.+|++++++++ |+||+++++.+...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47889999999999999999976 6899999987642 2344567889999999998 99999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
||++++++|.+++.+.. .+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999998654 4999999999999999999999999 99999999999999999999999999876543
Q ss_pred CCc-------------------eeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHH
Q 005355 545 DQT-------------------HLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV 605 (700)
Q Consensus 545 ~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~ 605 (700)
... .......++..|+|||++....++.++||||||+++++|++|..||.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----- 229 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL----- 229 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-----
Confidence 221 12223457889999999998889999999999999999999999997554211
Q ss_pred HHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCH----HHHHH
Q 005355 606 GYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTM----KEAAF 660 (700)
Q Consensus 606 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~----~evl~ 660 (700)
.+.... .. ....+...+..+.+++.+||+.+|.+||++ +++++
T Consensus 230 -~~~~~~-~~----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 -TFQKIL-KL----------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred -HHHHHH-hc----------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111111 10 011222335678899999999999999999 66654
No 361
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=8.9e-33 Score=295.14 Aligned_cols=264 Identities=22% Similarity=0.314 Sum_probs=198.5
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC--
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETE-- 459 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 459 (700)
+....++|++.+.||+|+||.||++... +++.||||++... .....+.+.+|++++++++|+||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 3445788999999999999999999865 6899999987542 2333467889999999999999999999987554
Q ss_pred ----cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEee
Q 005355 460 ----VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535 (700)
Q Consensus 460 ----~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~D 535 (700)
..++||||+ +++|.+++... .+++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEee
Confidence 348999999 77999888643 3899999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHH--------
Q 005355 536 FGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVG-------- 606 (700)
Q Consensus 536 fGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~-------- 606 (700)
||++...... .....++..|+|||.+.+ ..++.++|+||||+++++|++|..||.............
T Consensus 162 fg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 162 FGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred cccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 9999754322 123346889999999876 458899999999999999999999997554321100000
Q ss_pred HHHHHHHhcchhhhcc------hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 607 YFLEAMKENRLFEVLD------ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 607 ~~~~~~~~~~~~~~~d------~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.+...+.......... ..............+.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000000000 00000111223456889999999999999999999994
No 362
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6.1e-33 Score=290.27 Aligned_cols=253 Identities=25% Similarity=0.420 Sum_probs=196.1
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEcC-CcEEEEEEccccC-hhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEE
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVD-ESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 464 (700)
..++|++.+.||+|+||.||+|.+.. ++.||||+++... ......+..|+.++.+. .|+||+++++++.+....+++
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 34778889999999999999999874 8899999987532 33445677788777666 499999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
|||++ ++|.+++..... .+++..+..++.|++.||+|||+ .+ |+||||+|+||++++++.+||+|||++....
T Consensus 93 ~e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 93 MELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred eeccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 99984 577777765433 48999999999999999999997 47 9999999999999999999999999987553
Q ss_pred cCCceeeeeeecccccccccccccCC----CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhh
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRSSQ----FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFE 619 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (700)
.... .....++..|+|||++.+.. ++.++||||||+++|+|++|+.||....... +......... ...
T Consensus 167 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~~~~~~~-~~~ 238 (296)
T cd06618 167 DSKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-----EVLTKILQEE-PPS 238 (296)
T ss_pred CCCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-----HHHHHHhcCC-CCC
Confidence 2221 22234778999999987654 7889999999999999999999996432211 1111111111 000
Q ss_pred hcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 620 VLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 620 ~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
. ......+..+.+|+.+||+.+|.+||++.++++.
T Consensus 239 -----~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 -----L--PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred -----C--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0011234578999999999999999999999875
No 363
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=269.47 Aligned_cols=252 Identities=23% Similarity=0.396 Sum_probs=198.9
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc-cChhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL-VDESNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E 466 (700)
++++.+..||.|.-|.|++++.+ .|...|||.+.. .+....++++..+.++..-+ .|.||+.+|+|..+...++.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 34445567999999999999977 589999998775 45556778888888877664 8999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
.| ..-++.++++... ++++..+-++...+++||.||..+. .|+|||+||+|||+|+.|++|++|||++..+..
T Consensus 172 lM-s~C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd-- 244 (391)
T KOG0983|consen 172 LM-STCAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD-- 244 (391)
T ss_pred HH-HHHHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec--
Confidence 98 4456666665433 4999999999999999999998765 399999999999999999999999999976532
Q ss_pred ceeeeeeeccccccccccccc---CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 547 THLTTRVQGTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 547 ~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
+...+...|-+.|||||.+.- ..|+.++||||||+.|+||.||+.||.+-+.+-.. +..+.++. . +
T Consensus 245 SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~------ltkvln~e-P----P 313 (391)
T KOG0983|consen 245 SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV------LTKVLNEE-P----P 313 (391)
T ss_pred ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH------HHHHHhcC-C----C
Confidence 333455568999999999864 46889999999999999999999999876543211 11111100 0 1
Q ss_pred hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 624 RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 624 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.+..+ ...++.+.+++..||+.|+.+||...++++.
T Consensus 314 ~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 314 LLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11111 2256789999999999999999999998873
No 364
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.7e-32 Score=284.10 Aligned_cols=241 Identities=22% Similarity=0.295 Sum_probs=187.4
Q ss_pred eEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHH---HhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 397 ILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAI---LSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~---l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
+||+|+||.||++... .++.||+|.+.... ......+..|..+ ++...|+||+++++.+.+.+..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999865 58899999875422 1222234444443 444579999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+++|.+++.... .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 999999987543 4999999999999999999999999 9999999999999999999999999987543221
Q ss_pred eeeeecccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 550 TTRVQGTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
.....|+..|+|||++.+. .++.++||||||+++|||++|+.||.......... ....... .. ..
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~------~~----~~ 217 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMTLT------MA----VE 217 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH----HHHHhhc------cC----CC
Confidence 2234589999999998754 68999999999999999999999997653221110 0111110 01 11
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCC-----CHHHHHH
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRP-----TMKEAAF 660 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RP-----s~~evl~ 660 (700)
.+...+..+.+++.+||..+|.+|| ++.++++
T Consensus 218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 1222356788999999999999999 9999985
No 365
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.4e-33 Score=273.37 Aligned_cols=272 Identities=23% Similarity=0.283 Sum_probs=201.4
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcC-----CcEEEEEEccccCh--hhHHHHHHHHHHHhhcCCCceeeEEeEEEe-C
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTN-----GRIVAIKKSKLVDE--SNIEQFINEVAILSQINHRNVVKLLGCCLE-T 458 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 458 (700)
.....|+....||+|+||.||+|.-.+ .+.+|||+++.... .--....+|+.+++.++|+||+.+..++.. +
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 345678899999999999999996432 23689998875422 123457899999999999999999999988 6
Q ss_pred CcceEEEeeCCCCCHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC----CcEE
Q 005355 459 EVPLLVYEFIPNGTLYQYIHDQTE--EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK----YRAK 532 (700)
Q Consensus 459 ~~~~lv~E~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~----~~~k 532 (700)
...+|++||.+. +|..+|+.++. ...++...+..|+.||+.|+.|||++= |+||||||.||||..+ |.||
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeE
Confidence 778999999965 89999875432 346899999999999999999999999 9999999999999876 9999
Q ss_pred EeecCCCcccccCCce--eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhh---hHHH
Q 005355 533 VSDFGASRSVMIDQTH--LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDK---SLVG 606 (700)
Q Consensus 533 l~DfGl~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~---~~~~ 606 (700)
|+|||+++.+...-.. ....++.|..|.|||.+.+ ..|+.+.|||+.|||+.||++-++.|.+....-.. ....
T Consensus 177 IaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred eecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 9999999987644332 2345778999999999987 46899999999999999999999888765432111 1111
Q ss_pred HHHHHHHh------cchhhh---cch-hhhhcc------C----------HHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 607 YFLEAMKE------NRLFEV---LDA-RVLKEA------K----------EEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 607 ~~~~~~~~------~~~~~~---~d~-~~~~~~------~----------~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
++....+- ..|..+ .+- ....++ + ..-.+.-.+|+.++|+.||.+|.|+++.++
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle 336 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE 336 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence 11111110 011000 000 000000 0 001123678999999999999999999987
Q ss_pred HH
Q 005355 661 EL 662 (700)
Q Consensus 661 ~L 662 (700)
..
T Consensus 337 h~ 338 (438)
T KOG0666|consen 337 HP 338 (438)
T ss_pred cc
Confidence 43
No 366
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=282.01 Aligned_cols=245 Identities=27% Similarity=0.384 Sum_probs=203.4
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCc
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEV 460 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 460 (700)
.+...+|..+.+||+|+||.|.+|.-+ ..+.+|||+++.. ...+.+--..|-++|... +-|.++++..++...+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 445678999999999999999999876 4678999988752 223334445677777776 57789999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
+++||||+.+|+|.-+|+.... +.+..+..+|.+||-||-+||+++ |+.||||.+||+||.+|.+||+|||+++
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcK 498 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 498 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccc
Confidence 9999999999999999987654 888899999999999999999999 9999999999999999999999999998
Q ss_pred ccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 541 SVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 541 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
.-..+ ...+.+.+||+.|+|||++..++|...+|.|||||+||||+.|++||++.++++. .+.+.+
T Consensus 499 Eni~~-~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el-------F~aI~e------ 564 (683)
T KOG0696|consen 499 ENIFD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-------FQAIME------ 564 (683)
T ss_pred ccccC-CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH-------HHHHHH------
Confidence 64333 3345668899999999999999999999999999999999999999998876652 222222
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT 654 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs 654 (700)
... .++...+.+..++.+..|..+|.+|.-
T Consensus 565 --hnv--syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 565 --HNV--SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred --ccC--cCcccccHHHHHHHHHHhhcCCccccC
Confidence 111 234556677888999999999999953
No 367
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7.2e-33 Score=283.84 Aligned_cols=249 Identities=24% Similarity=0.309 Sum_probs=196.0
Q ss_pred CCCccceEeeeCCeEEEEEEEcC-CcEEEEEEccc-----cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKL-----VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
+|.+.+.||+|+||.||++.+.. +..+++|..+. .......++..|+.+++.++||||+++++.+.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 57888999999999999998753 44455555432 1223345677899999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 465 YEFIPNGTLYQYIHDQT-EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
+||+++++|.+++.... ....+++..++.++.|+++||.|||+.+ ++|+||+|+||+++. +.+||+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999987532 2345899999999999999999999999 999999999999976 469999999987653
Q ss_pred cCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcch
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDA 623 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 623 (700)
... .......++..|+|||.+.+..++.++|+||||+++|+|++|..||......+ .... ...+.
T Consensus 157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~------~~~~-~~~~~------- 221 (260)
T cd08222 157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS------VVLR-IVEGP------- 221 (260)
T ss_pred CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH------HHHH-HHcCC-------
Confidence 322 22233457889999999988889999999999999999999999986433211 1111 11111
Q ss_pred hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 624 RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 624 ~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
....+...+..+.+++.+||+.+|++||++.|+++
T Consensus 222 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 --TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred --CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 11123345668899999999999999999999986
No 368
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.2e-32 Score=292.98 Aligned_cols=263 Identities=24% Similarity=0.305 Sum_probs=193.2
Q ss_pred CCCccceEeeeCCeEEEEEEEc-C--CcEEEEEEcccc--ChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeC----Cc
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-N--GRIVAIKKSKLV--DESNIEQFINEVAILSQI-NHRNVVKLLGCCLET----EV 460 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 460 (700)
+|++.+.||+|+||.||++... . +..||+|++... .....+.+.+|+++++++ +|+||+++++..... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4788899999999999999976 3 678999987642 223356788999999999 599999999875432 45
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.++++|++. ++|.+++.... .+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 678888885 68999986543 3899999999999999999999999 9999999999999999999999999997
Q ss_pred ccccCCce---eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--------
Q 005355 541 SVMIDQTH---LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF-------- 608 (700)
Q Consensus 541 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~-------- 608 (700)
........ ......++..|+|||++.+ ..++.++||||||+++|+|++|..||...+...........
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 65432211 1223468899999998765 46899999999999999999999999765432211100000
Q ss_pred HHHHHhcchhhhcc---h---hhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 609 LEAMKENRLFEVLD---A---RVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 609 ~~~~~~~~~~~~~d---~---~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...+.......... . .............+.+|+.+||+.+|++|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000000000 0 0000011112457889999999999999999999875
No 369
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=324.98 Aligned_cols=254 Identities=25% Similarity=0.371 Sum_probs=204.8
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEE-cCCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcce
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGML-TNGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 462 (700)
...+-+++...+||.|.||.||.|.. .+|+..|+|-++. ......+.+.+|+.+|..++|||+|+.+|+-.+.+..+
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 34456778888999999999999984 5799999996554 33444567889999999999999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
|.|||+++|+|.+++..... .++.....+..|++.|++|||++| ||||||||.||||+.+|.+|++|||.+..+
T Consensus 1311 IFMEyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHHHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEe
Confidence 99999999999999987653 677777888999999999999999 999999999999999999999999999877
Q ss_pred ccCCce---eeeeeecccccccccccccC---CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcc
Q 005355 543 MIDQTH---LTTRVQGTFGYLDPEYFRSS---QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENR 616 (700)
Q Consensus 543 ~~~~~~---~~~~~~gt~~y~aPE~~~~~---~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 616 (700)
...... ......||+.|||||++.+. ....++|||||||++.||+||+.||...+.+= .+.+. ...+.
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---aIMy~---V~~gh 1458 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW---AIMYH---VAAGH 1458 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh---HHHhH---HhccC
Confidence 544211 12245699999999999764 35568999999999999999999997554321 01110 11111
Q ss_pred hhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 617 LFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 617 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
. ...+.....+-.+++.+||..||++|.++.|+++
T Consensus 1459 ~---------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1459 K---------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred C---------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 1 1223446677888999999999999988887766
No 370
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.3e-33 Score=314.23 Aligned_cols=254 Identities=29% Similarity=0.422 Sum_probs=193.3
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc-ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC------
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV-DESNIEQFINEVAILSQINHRNVVKLLGCCLET------ 458 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 458 (700)
.-..+|+.+++||+||||.||+++.+ ||+.+|||++... .......+.+|+..|.+|+|||||+++..+.+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 34577888999999999999999976 8999999998764 344457789999999999999999998533110
Q ss_pred --------------------------------------------------------------------------------
Q 005355 459 -------------------------------------------------------------------------------- 458 (700)
Q Consensus 459 -------------------------------------------------------------------------------- 458 (700)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ---------------------------------CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 005355 459 ---------------------------------EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL 505 (700)
Q Consensus 459 ---------------------------------~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L 505 (700)
...||-|||++..+|.++++++... -.....++++++|++||+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHH
Confidence 1125678888888888888765421 14678899999999999999
Q ss_pred HhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc-----------------cCCceeeeeeecccccccccccccC
Q 005355 506 HSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM-----------------IDQTHLTTRVQGTFGYLDPEYFRSS 568 (700)
Q Consensus 506 H~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~ 568 (700)
|++| ||||||||.||+|+++..|||+|||++.... .......+..+||.-|+|||++.+.
T Consensus 714 H~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 9999 9999999999999999999999999998721 0111123456799999999999765
Q ss_pred ---CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHh
Q 005355 569 ---QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCL 645 (700)
Q Consensus 569 ---~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl 645 (700)
.|+.|+|+||||+||+||+. ||.... |.. ..+...+.+.+..- .++.....+.-+.+|++|+
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--ERa----~iL~~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLY---PFGTSM--ERA----SILTNLRKGSIPEP------ADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhc---cCCchH--HHH----HHHHhcccCCCCCC------cccccccchHHHHHHHHHh
Confidence 49999999999999999996 554322 221 12222333332221 1223344455677999999
Q ss_pred ccCCCCCCCHHHHHH
Q 005355 646 NMIGKKRPTMKEAAF 660 (700)
Q Consensus 646 ~~~p~~RPs~~evl~ 660 (700)
+.||.+|||+.|+|.
T Consensus 856 ~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHDPSKRPTATELLN 870 (1351)
T ss_pred cCCCccCCCHHHHhh
Confidence 999999999999885
No 371
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-34 Score=315.98 Aligned_cols=259 Identities=24% Similarity=0.330 Sum_probs=217.2
Q ss_pred hHHHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe
Q 005355 382 SMELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQINHRNVVKLLGCCLE 457 (700)
Q Consensus 382 ~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 457 (700)
..+++...++|.++++||+|+||.|..++++ .++.+|+|++.. ........|..|-.+|..-+.+.|+.++-.|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4567777899999999999999999999986 588999998876 334556779999999999999999999999999
Q ss_pred CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecC
Q 005355 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFG 537 (700)
Q Consensus 458 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfG 537 (700)
..++|+|||||+||+|..++.+.. .++++.+..++..|+.||.-||+.| +|||||||+|||||..|++||+|||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccch
Confidence 999999999999999999999876 3999999999999999999999999 9999999999999999999999999
Q ss_pred CCcccccCCceeeeeeeccccccccccccc-----CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHH
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRS-----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAM 612 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 612 (700)
.+-.+..+..-.....+|||.|.+||++.. +.|....|.||+||++|||+.|..||... +++.-+...+
T Consensus 221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad------slveTY~KIm 294 (1317)
T KOG0612|consen 221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD------SLVETYGKIM 294 (1317)
T ss_pred hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH------HHHHHHHHHh
Confidence 998877676667777889999999999853 56889999999999999999999999643 3333333333
Q ss_pred HhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC---HHHHHH
Q 005355 613 KENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT---MKEAAF 660 (700)
Q Consensus 613 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs---~~evl~ 660 (700)
.-.....+. .....+.+..+||.+.+. +|+.|.. ++++..
T Consensus 295 ~hk~~l~FP-------~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 295 NHKESLSFP-------DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred chhhhcCCC-------cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 221111111 113467788899999876 7888887 887765
No 372
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=274.70 Aligned_cols=253 Identities=21% Similarity=0.327 Sum_probs=203.6
Q ss_pred ceEeeeCCeEEEEEE-EcCCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 396 RILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
++||+|+|+.|--+. ..++..+|||++.....-.+.++++|++++.+. .|+||++|+++|.++...|||||-|.+|+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 579999999999887 568999999999887777789999999999998 599999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC---cEEEeecCCCcccccCC----
Q 005355 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY---RAKVSDFGASRSVMIDQ---- 546 (700)
Q Consensus 474 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~---~~kl~DfGl~~~~~~~~---- 546 (700)
..+|++... +++.++.++.++|+.||.|||.+| |.||||||+|||-.+.. -+||+||.|........
T Consensus 164 LshI~~~~~---F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 164 LSHIQKRKH---FNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred HHHHHHhhh---ccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence 999987654 999999999999999999999999 99999999999996543 48999998876543221
Q ss_pred --ceeeeeeecccccccccccc-----cCCCCcccceehHHHHHHHHHhCCCCCCCCCchh--------hhhHHHHHHHH
Q 005355 547 --THLTTRVQGTFGYLDPEYFR-----SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE--------DKSLVGYFLEA 611 (700)
Q Consensus 547 --~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~--------~~~~~~~~~~~ 611 (700)
.....+.+|+..|||||+.. ...|+.+.|.||||||||-||+|.+||.+.-..+ ...--+.+...
T Consensus 238 astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFes 317 (463)
T KOG0607|consen 238 ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFES 317 (463)
T ss_pred CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHH
Confidence 11223356888999999863 2457889999999999999999999998655322 11122223344
Q ss_pred HHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 612 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.+++.. +. +......+.+..+|+..+|..++.+|.++..+++
T Consensus 318 IQEGkYe-FP-----dkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 318 IQEGKYE-FP-----DKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HhccCCc-CC-----hhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 4444431 11 1223445667788999999999999999999887
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.4e-33 Score=296.89 Aligned_cols=261 Identities=25% Similarity=0.338 Sum_probs=198.3
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc----
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLETEV---- 460 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 460 (700)
..++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++|+|++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4678999999999999999999976 5789999987642 23344677889999999999999999988766554
Q ss_pred --ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCC
Q 005355 461 --PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGA 538 (700)
Q Consensus 461 --~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl 538 (700)
.++|+||+ +++|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccccc
Confidence 78999998 67999998753 3899999999999999999999999 99999999999999999999999999
Q ss_pred CcccccCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--------H
Q 005355 539 SRSVMIDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF--------L 609 (700)
Q Consensus 539 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~--------~ 609 (700)
+...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+........ .
T Consensus 165 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 165 ARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred ccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 9765322 223457889999999865 46789999999999999999999999765432211100000 0
Q ss_pred HHHHhcchhhhcchh------hhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 610 EAMKENRLFEVLDAR------VLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 610 ~~~~~~~~~~~~d~~------~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
..+........+... .........+..+.+++.+||+.+|++|||+.||++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000000000000000 000001123567899999999999999999999976
No 374
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-33 Score=267.91 Aligned_cols=253 Identities=22% Similarity=0.274 Sum_probs=201.8
Q ss_pred HhcCCCc-cceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEe----CCc
Q 005355 388 ATDNFNT-NRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCLE----TEV 460 (700)
Q Consensus 388 ~~~~~~~-~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~ 460 (700)
.+++|++ .++||-|-.|.|.....+ .++++|+|++... ...++|+++--+. .|+|||.+++++.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 4566665 357999999999998876 7899999987643 4567888876554 69999999998764 355
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC---CCCcEEEeecC
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFG 537 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~---~~~~~kl~DfG 537 (700)
+++|||.|+||.|+..+..... ..+++.++..|++||..|+.|||+.+ |.||||||+|+|.+ .|..+||+|||
T Consensus 134 LLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence 6799999999999999988754 45999999999999999999999999 99999999999996 46679999999
Q ss_pred CCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcch
Q 005355 538 ASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRL 617 (700)
Q Consensus 538 l~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (700)
+++.... .....+.+-|+.|.|||++...+|+...|+||+||++|-|++|.+||...... .+.--+...+..+..
T Consensus 210 FAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~---aispgMk~rI~~gqy 284 (400)
T KOG0604|consen 210 FAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL---AISPGMKRRIRTGQY 284 (400)
T ss_pred cccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc---cCChhHHhHhhccCc
Confidence 9986432 33345567899999999999999999999999999999999999999754321 111123333333332
Q ss_pred hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 618 FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 618 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
. .+.+.....++...++|+.+|..+|.+|.|++++++
T Consensus 285 ~------FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 285 E------FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred c------CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1 122233566778899999999999999999999886
No 375
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-33 Score=275.90 Aligned_cols=265 Identities=23% Similarity=0.349 Sum_probs=206.9
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCC--C----ceeeEEeEEEeC
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINH--R----NVVKLLGCCLET 458 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~----niv~l~~~~~~~ 458 (700)
...+++|.+...+|+|+||.|....+. .+..||||+++...... +..+-|+++|.++.+ | -++++.++|.-.
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYr-eAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYR-EAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHh-hHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 344889999999999999999998865 46899999998765543 667789999999842 2 377888899999
Q ss_pred CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC------------
Q 005355 459 EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD------------ 526 (700)
Q Consensus 459 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~------------ 526 (700)
++.++|+|.+ +-|+.++|..+.. .+++..++..++.|++++++|||+.+ ++|.||||+|||+.
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCC
Confidence 9999999999 6699999987643 45899999999999999999999999 99999999999993
Q ss_pred --------CCCcEEEeecCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCc
Q 005355 527 --------DKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDS 598 (700)
Q Consensus 527 --------~~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~ 598 (700)
.+..+||+|||.+...... ...++.|.-|.|||++.+-.|+.+.||||+||||+||.+|...|+..+.
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccC----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 2445899999999754322 2556789999999999999999999999999999999999999998875
Q ss_pred hhhhhHHHHHHHHHHhcchhhh----------cc---------------h-hh---hhccCHHHHHHHHHHHHHHhccCC
Q 005355 599 EEDKSLVGYFLEAMKENRLFEV----------LD---------------A-RV---LKEAKEEEIITVAMLAKRCLNMIG 649 (700)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~----------~d---------------~-~~---~~~~~~~~~~~l~~li~~cl~~~p 649 (700)
.|.....+.++..+....+... +| + .. .......+..+|.+|+++||..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 5543333322211111000000 00 0 00 001123455679999999999999
Q ss_pred CCCCCHHHHHH
Q 005355 650 KKRPTMKEAAF 660 (700)
Q Consensus 650 ~~RPs~~evl~ 660 (700)
.+|+|+.|+++
T Consensus 395 ~~RiTl~EAL~ 405 (415)
T KOG0671|consen 395 ARRITLREALS 405 (415)
T ss_pred cccccHHHHhc
Confidence 99999999986
No 376
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=6.2e-32 Score=274.98 Aligned_cols=236 Identities=32% Similarity=0.395 Sum_probs=193.9
Q ss_pred EeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 398 LGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
||+|+||.||++... +++.+++|.+.... ....+.+..|+.++++++|+||+++++.+...+..+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999976 58899999876432 23456889999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeee
Q 005355 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRV 553 (700)
Q Consensus 474 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~ 553 (700)
.+++.... .+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~ 153 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTF 153 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCC
Confidence 99998654 3899999999999999999999999 9999999999999999999999999987653322 123344
Q ss_pred ecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHH
Q 005355 554 QGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEE 633 (700)
Q Consensus 554 ~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 633 (700)
.++..|+|||.+.+...+.++|+||||+++|+|++|..||...+..+ .........+ ..+...
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~-------~~~~~~~~~~----------~~~~~~ 216 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE-------IYEKILKDPL----------RFPEFL 216 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHhcCCC----------CCCCCC
Confidence 57889999999998889999999999999999999999996554311 1111111111 112222
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHH
Q 005355 634 IITVAMLAKRCLNMIGKKRPTMKE 657 (700)
Q Consensus 634 ~~~l~~li~~cl~~~p~~RPs~~e 657 (700)
+..+.+++++||..+|++||++.+
T Consensus 217 ~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 217 SPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CHHHHHHHHHHhcCCHhhCCCccc
Confidence 567889999999999999999954
No 377
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.4e-31 Score=306.19 Aligned_cols=146 Identities=27% Similarity=0.393 Sum_probs=132.3
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
.++|++.++||+|+||.||+|.+. .++.||||+++.. .......+.+|+.++..++|+||+++++.+...+..+||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367899999999999999999976 6889999987642 234457788999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
|||+.+++|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+||||+.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997653 3889999999999999999999999 9999999999999999999999999886
No 378
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-32 Score=276.51 Aligned_cols=260 Identities=28% Similarity=0.431 Sum_probs=203.3
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccCh-------hhHHHHHHHHHHHhhcCCCceeeEEeEEE-
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDE-------SNIEQFINEVAILSQINHRNVVKLLGCCL- 456 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~- 456 (700)
....++|-++.+||+|||+.||+|.+- ..+.||||+-..... .-.+...+|..|-+.|.||.||++++++.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 344577888999999999999999954 678999998554221 12345678999999999999999999986
Q ss_pred eCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC---CCCcEEE
Q 005355 457 ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKV 533 (700)
Q Consensus 457 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~---~~~~~kl 533 (700)
+.+..+-|+||+++.+|+-||+.+.. ++++++..|+.||+.||.||.... +||||-||||.||||- ..|.+||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhkl---mSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHKL---MSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhhh---hhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEe
Confidence 56677899999999999999987754 999999999999999999999876 6799999999999994 4688999
Q ss_pred eecCCCcccccCCce------eeeeeecccccccccccc----cCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhh
Q 005355 534 SDFGASRSVMIDQTH------LTTRVQGTFGYLDPEYFR----SSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKS 603 (700)
Q Consensus 534 ~DfGl~~~~~~~~~~------~~~~~~gt~~y~aPE~~~----~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~ 603 (700)
+||||++.+..+... ......||++|++||.+- ....+.|+||||+|||+|..+.|++||.......+
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd-- 692 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD-- 692 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH--
Confidence 999999977543222 344466999999999873 24578899999999999999999999986654332
Q ss_pred HHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 604 LVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
...++.+.....-.. ...+....+..++|++||+..-++|....++..
T Consensus 693 -------ILqeNTIlkAtEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 693 -------ILQENTILKATEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred -------HHhhhchhcceeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 222222222221111 112345567788999999999999998877654
No 379
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-33 Score=267.69 Aligned_cols=257 Identities=25% Similarity=0.351 Sum_probs=199.1
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC-hhhHHHHHHHHHHHhh-cCCCceeeEEeEEEeCCcceEEEe
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD-ESNIEQFINEVAILSQ-INHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++.+.+..||.|.||+|++..++ .|+..|||++.... ....++++.|.+...+ -+.||||+++|....++..++.||
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME 143 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME 143 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence 34455578999999999999976 69999999987644 3566888999887655 479999999999999999999999
Q ss_pred eCCCCCHHHHHhcc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 467 FIPNGTLYQYIHDQ--TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 467 ~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
+| ..||+.+-... ..+..+++..+-.|+...+.||.||...-+ |+||||||+||||+..|.+||+|||++..+.
T Consensus 144 LM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv- 219 (361)
T KOG1006|consen 144 LM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDVKLCDFGICGQLV- 219 (361)
T ss_pred HH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecCCCEeeecccchHhHH-
Confidence 99 56776664321 122348999999999999999999987642 9999999999999999999999999997552
Q ss_pred CCceeeeeeeccccccccccccc--CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRS--SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
.+...+...|-..|||||.+.. ..|+.+|||||||++|+|+.||..|+...+. ..+++.+... +....++.
T Consensus 220 -~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~Vv~-gdpp~l~~ 292 (361)
T KOG1006|consen 220 -DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQVVI-GDPPILLF 292 (361)
T ss_pred -HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHHHHc-CCCCeecC
Confidence 2233344558889999999965 3589999999999999999999999976543 2222222222 22211111
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.....+....+..++.-||..|-..||...+++++
T Consensus 293 ----~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 293 ----DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ----cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 12224567789999999999999999999998763
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=3e-32 Score=279.83 Aligned_cols=264 Identities=27% Similarity=0.399 Sum_probs=207.9
Q ss_pred cceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 395 NRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
.+.||.|-||+||-|+++ +|+.||||++.. ....+..++++|+.||+++.||.||.+--.|+..+..+.|||-+ .|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 578999999999999976 799999998764 34555688999999999999999999999999999999999999 56
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC---CCcEEEeecCCCcccccCCce
Q 005355 472 TLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD---KYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 472 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~---~~~~kl~DfGl~~~~~~~~~~ 548 (700)
+..+.|-.... ..|++.....++.||+.||.|||.++ |+|.||||+|||+.. -.++||+|||+++.+. +..
T Consensus 648 DMLEMILSsEk-gRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg--Eks 721 (888)
T KOG4236|consen 648 DMLEMILSSEK-GRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIG--EKS 721 (888)
T ss_pred hHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecc--hhh
Confidence 66666554322 23899999999999999999999999 999999999999954 4689999999999764 444
Q ss_pred eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhc
Q 005355 549 LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKE 628 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 628 (700)
....++||+.|+|||+++++.|...-|+||.|||+|--++|..||.....-. +.+.+..+ +- +..
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn---------dQIQNAaF---My---Pp~ 786 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN---------DQIQNAAF---MY---PPN 786 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh---------HHhhcccc---cc---CCC
Confidence 5567889999999999999999999999999999999999999996433211 11111111 11 112
Q ss_pred cCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH-----------HHHhchhhcCCCccCCCCCc
Q 005355 629 AKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF-----------ELGGIRASIGDSIMQHNCDD 680 (700)
Q Consensus 629 ~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~-----------~L~~l~~~~~~~~~~~~~~~ 680 (700)
...+......+||..+|+..-++|-|....+. -|+.+...+.+...-.+.+|
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRelE~~igeRyiThesDD 849 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLRELEVRIGERYITHESDD 849 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHHHHHhhCcceecCcchh
Confidence 22445567788999999999999999876543 35566655555544444443
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=3.8e-33 Score=262.84 Aligned_cols=265 Identities=22% Similarity=0.324 Sum_probs=200.2
Q ss_pred cCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc--ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEe--------C
Q 005355 390 DNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV--DESNIEQFINEVAILSQINHRNVVKLLGCCLE--------T 458 (700)
Q Consensus 390 ~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 458 (700)
+.|....+||+|.||.||+|+.+ .++.||+|+.... ...-....++|+.+|..+.|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 44555678999999999999966 5788999875432 22334567899999999999999999988753 2
Q ss_pred CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCC
Q 005355 459 EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGA 538 (700)
Q Consensus 459 ~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl 538 (700)
...+|||++++ -+|.-+|.....+ ++..++.+++.+++.||.|+|... |+|||+|+.|+||+.++.+||+|||+
T Consensus 97 ~t~ylVf~~ce-hDLaGlLsn~~vr--~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCE-HDLAGLLSNRKVR--FSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhh-hhHHHHhcCcccc--ccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccc
Confidence 34689999995 4888888765433 899999999999999999999999 99999999999999999999999999
Q ss_pred CcccccCCce---eeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh
Q 005355 539 SRSVMIDQTH---LTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE 614 (700)
Q Consensus 539 ~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 614 (700)
++.+...... ..+..+.|+.|++||.+.+ ..|+.+.|||.-|||+.||+++.+-+.+........++......+..
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 9876543322 2344567999999999876 57999999999999999999999998877655544444433322222
Q ss_pred cchhhhcchhhhhcc------------CHHH------HHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 615 NRLFEVLDARVLKEA------------KEEE------IITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 615 ~~~~~~~d~~~~~~~------------~~~~------~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.|.....-.+.... -.+. .++..+|+.++|..||.+|+++.+++.
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 222211111110000 0111 125778999999999999999988875
No 382
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=3.8e-31 Score=267.36 Aligned_cols=220 Identities=25% Similarity=0.198 Sum_probs=177.1
Q ss_pred eCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHHHHHhc
Q 005355 401 GGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD 479 (700)
Q Consensus 401 G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~ 479 (700)
|.||.||++.+. +++.||+|++.... .+.+|...+....|||++++++.+.+.+..+++|||+++++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999975 68899999986532 234455555566799999999999999999999999999999999976
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeeeeccccc
Q 005355 480 QTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559 (700)
Q Consensus 480 ~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y 559 (700)
.. .+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++++|||++...... .....++..|
T Consensus 79 ~~---~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y 148 (237)
T cd05576 79 FL---NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMY 148 (237)
T ss_pred hc---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccc
Confidence 53 3899999999999999999999999 999999999999999999999999987654321 1223356789
Q ss_pred ccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHH
Q 005355 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAM 639 (700)
Q Consensus 560 ~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 639 (700)
+|||.+....++.++||||+|++++||++|..|+....... .. ... .+.+......+.+
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------------~~-----~~~----~~~~~~~~~~~~~ 207 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------------NT-----HTT----LNIPEWVSEEARS 207 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------------cc-----ccc----cCCcccCCHHHHH
Confidence 99999988889999999999999999999998875322110 00 000 0112234457889
Q ss_pred HHHHHhccCCCCCCCHH
Q 005355 640 LAKRCLNMIGKKRPTMK 656 (700)
Q Consensus 640 li~~cl~~~p~~RPs~~ 656 (700)
++.+||+.||++||++.
T Consensus 208 li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 208 LLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHccCCHHHhcCCC
Confidence 99999999999999973
No 383
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=283.68 Aligned_cols=239 Identities=23% Similarity=0.279 Sum_probs=197.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEe
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYE 466 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 466 (700)
++.|.....+|.|+|+.|-++... .++..+||++.... .+-.+|+.++... +|+||+++.+.+.+..+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 667888888999999999998865 67889999987642 2235677666665 79999999999999999999999
Q ss_pred eCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEE-CCCCcEEEeecCCCcccccC
Q 005355 467 FIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILL-DDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 467 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl-~~~~~~kl~DfGl~~~~~~~ 545 (700)
.+.++-|.+.+..... ....+..|+.+|+.|+.|||.+| ++||||||+|||+ +..++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~----~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE----FCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hccccHHHHHHHhcch----hHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 9999998888876542 33777889999999999999999 9999999999999 58899999999999876433
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
.....-|..|.|||++....+++++||||||++||+||+|+.||.....+. .+...+..++
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~------ei~~~i~~~~--------- 530 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI------EIHTRIQMPK--------- 530 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH------HHHHhhcCCc---------
Confidence 223346889999999999999999999999999999999999998665441 1222222222
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+....+...++|+.+||+.||.+||+|.++..
T Consensus 531 ---~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 531 ---FSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ---cccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 22456677889999999999999999999876
No 384
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.8e-31 Score=286.09 Aligned_cols=257 Identities=25% Similarity=0.370 Sum_probs=210.1
Q ss_pred HHHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEE----
Q 005355 383 MELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCL---- 456 (700)
Q Consensus 383 ~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~---- 456 (700)
..+...++.|.+.+.||+|.+|.||+++.. +++.+|||+.......+ +++..|.++|+.. .|||++.++|++.
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d-eEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE-EEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc-HHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 344455788999999999999999999954 78899999887654444 6778899999887 6999999999986
Q ss_pred -eCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEee
Q 005355 457 -ETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535 (700)
Q Consensus 457 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~D 535 (700)
..++++|||||+.+||..|+++... ...+.|..+..|++.++.||.+||.+. ++|||||-.|||++.++.|||.|
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEee
Confidence 3578899999999999999998876 445999999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccccCCceeeeeeecccccccccccccC-----CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHH
Q 005355 536 FGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS-----QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLE 610 (700)
Q Consensus 536 fGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 610 (700)
||++..+... .....+..||+.|||||++... .|+..+|+||||++..||.-|.+|+...-+.. +
T Consensus 167 FGvSaQldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr-------a-- 236 (953)
T KOG0587|consen 167 FGVSAQLDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR-------A-- 236 (953)
T ss_pred eeeeeeeecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh-------h--
Confidence 9999876433 3334556799999999998653 46778999999999999999999986543321 1
Q ss_pred HHHhcchhhhc-chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 611 AMKENRLFEVL-DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 611 ~~~~~~~~~~~-d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
++.+. .+...-..+..-..++.++|..||..|-++||++.++++
T Consensus 237 ------LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 ------LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ------hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 11111 111112224566778999999999999999999999886
No 385
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=260.97 Aligned_cols=249 Identities=24% Similarity=0.394 Sum_probs=205.7
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc---cChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcce
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL---VDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 462 (700)
..++|+++++||+|+|.+|..++++ ..+.+|+|+++. .+..+++-...|-.++.+. +||.+|.+..+|..+...+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 3578999999999999999999975 678899998764 3455567778888888875 7999999999999999999
Q ss_pred EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 463 LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 463 lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+|.||+++|+|.-++.++++ ++++.+..+..+|.-||.|||++| |+.||||.+|+|||..|.+||+|+|+.+.-
T Consensus 328 fvieyv~ggdlmfhmqrqrk---lpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEecCcceeeehhhhhc---CcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcC
Confidence 99999999999988887654 999999999999999999999999 999999999999999999999999999854
Q ss_pred ccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchh-hhhHHHHHHHHHHhcchhhhc
Q 005355 543 MIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEE-DKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 543 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 621 (700)
. .....+.+.+||+.|.|||++.+..|...+|.|+|||+++||+.|+.||+....+. +.+...++.+.+-+.++
T Consensus 402 l-~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi---- 476 (593)
T KOG0695|consen 402 L-GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI---- 476 (593)
T ss_pred C-CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc----
Confidence 3 33445667889999999999999999999999999999999999999998554332 22333344444433322
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCC
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRP 653 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RP 653 (700)
..+...+.....+++.-|+.||.+|.
T Consensus 477 ------riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 477 ------RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ------cccceeehhhHHHHHHhhcCCcHHhc
Confidence 11223344556688999999999985
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.2e-30 Score=293.24 Aligned_cols=259 Identities=22% Similarity=0.280 Sum_probs=171.6
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-C----CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeE------EE
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-N----GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGC------CL 456 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~ 456 (700)
..++|++.++||+|+||.||+|++. + +..||||++...... +.+..| .+....+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4678999999999999999999976 4 689999987643221 111111 1112222222222211 24
Q ss_pred eCCcceEEEeeCCCCCHHHHHhccCCCC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 005355 457 ETEVPLLVYEFIPNGTLYQYIHDQTEEF-----------------PITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIK 519 (700)
Q Consensus 457 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~-----------------~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik 519 (700)
.....++|+||+++++|.+++....... ......+..++.||+.||+|||+++ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 5567899999999999999997543110 1123446679999999999999999 9999999
Q ss_pred CCcEEECC-CCcEEEeecCCCcccccCCceeeeeeecccccccccccccC----------------------CCCcccce
Q 005355 520 SANILLDD-KYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSS----------------------QFTEKSDV 576 (700)
Q Consensus 520 ~~NILl~~-~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~ksDV 576 (700)
|+|||+++ ++.+||+|||+++.+............+++.|+|||.+... .+..++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 57999999999986644444444556789999999965322 23456799
Q ss_pred ehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcc-----hhhhcchhhhhc------cCHHHHHHHHHHHHHHh
Q 005355 577 YSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENR-----LFEVLDARVLKE------AKEEEIITVAMLAKRCL 645 (700)
Q Consensus 577 wSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~------~~~~~~~~l~~li~~cl 645 (700)
|||||+||||+++..++.... . .+...+.... +...+.+....+ ..........+|+.+||
T Consensus 363 wSlGviL~el~~~~~~~~~~~----~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNL----I----QFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHH----H----HHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 999999999999766543210 0 1111111100 111111110000 00001123458999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 005355 646 NMIGKKRPTMKEAAFE 661 (700)
Q Consensus 646 ~~~p~~RPs~~evl~~ 661 (700)
+.||++|||++|+++.
T Consensus 435 ~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 435 RFKGRQRISAKAALAH 450 (566)
T ss_pred cCCcccCCCHHHHhCC
Confidence 9999999999999984
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.6e-30 Score=284.81 Aligned_cols=261 Identities=20% Similarity=0.255 Sum_probs=182.8
Q ss_pred HhcCCCccceEeeeCCeEEEEEEE-----------------cCCcEEEEEEccccChhhHHHHH--------------HH
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGML-----------------TNGRIVAIKKSKLVDESNIEQFI--------------NE 436 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~~~--------------~E 436 (700)
..++|++.++||+|+||.||+|.+ ..++.||||++........++|. .|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 477899999999999999999964 23567999998765443334443 46
Q ss_pred HHHHhhcCCCce-----eeEEeEEEe--------CCcceEEEeeCCCCCHHHHHhccCC---------------------
Q 005355 437 VAILSQINHRNV-----VKLLGCCLE--------TEVPLLVYEFIPNGTLYQYIHDQTE--------------------- 482 (700)
Q Consensus 437 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~E~~~~gsL~~~l~~~~~--------------------- 482 (700)
+.++.+++|.++ +++++++.. ....+|||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 667777766554 667777643 3567999999999999999975321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeeeecccccccc
Q 005355 483 EFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDP 562 (700)
Q Consensus 483 ~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aP 562 (700)
...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++...............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 113567889999999999999999999 99999999999999999999999999975533222222223357899999
Q ss_pred cccccCC----------------------CCcccceehHHHHHHHHHhCCC-CCCCCCchhhh-----hHHHHHHHHHHh
Q 005355 563 EYFRSSQ----------------------FTEKSDVYSFGVVLVELLTGQK-PIRSTDSEEDK-----SLVGYFLEAMKE 614 (700)
Q Consensus 563 E~~~~~~----------------------~s~ksDVwSlG~il~elltg~~-p~~~~~~~~~~-----~~~~~~~~~~~~ 614 (700)
|.+.... ...+.||||+|+++++|+++.. |+......... .... .....+.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~-~~r~~~~ 458 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN-RWRMYKG 458 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH-HHHhhcc
Confidence 9875432 1235799999999999999875 66432211100 0000 0001111
Q ss_pred cchhhhcchhhhhccCHHHHHHHHHHHHHHhccCC---CCCCCHHHHHH
Q 005355 615 NRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIG---KKRPTMKEAAF 660 (700)
Q Consensus 615 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p---~~RPs~~evl~ 660 (700)
... + -...........+|+.++|..+| .+|+|++|+++
T Consensus 459 ~~~----~----~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 459 QKY----D----FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cCC----C----cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 110 0 01112335668889999999766 68999999986
No 388
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=2.1e-30 Score=261.54 Aligned_cols=238 Identities=30% Similarity=0.411 Sum_probs=194.9
Q ss_pred CCeEEEEEEEc-CCcEEEEEEccccChhh-HHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHHHHHhc
Q 005355 402 GQGTVYKGMLT-NGRIVAIKKSKLVDESN-IEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHD 479 (700)
Q Consensus 402 ~fg~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~ 479 (700)
+||.||+|++. +++.+++|++....... .+.+.+|++.+++++|+|++++++.+......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999987 48999999987655444 68899999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeeeeccccc
Q 005355 480 QTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGY 559 (700)
Q Consensus 480 ~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y 559 (700)
... +++..++.++.+++.++++||+.+ ++|+||+|+||+++.++.++|+|||.+....... ......++..|
T Consensus 81 ~~~---~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~ 152 (244)
T smart00220 81 RGR---LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEY 152 (244)
T ss_pred ccC---CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCC
Confidence 543 889999999999999999999999 9999999999999999999999999998654332 23345578899
Q ss_pred ccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHH
Q 005355 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAM 639 (700)
Q Consensus 560 ~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 639 (700)
++||.+....++.++|||+||+++++|++|..||......+ ............. ..........+.+
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~------~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 219 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL------ELFKKIGKPKPPF-------PPPEWKISPEAKD 219 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH------HHHHHHhccCCCC-------ccccccCCHHHHH
Confidence 99999998889999999999999999999999997532211 1111111111110 0000004457889
Q ss_pred HHHHHhccCCCCCCCHHHHHH
Q 005355 640 LAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 640 li~~cl~~~p~~RPs~~evl~ 660 (700)
++.+||..+|++||++.++++
T Consensus 220 ~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 220 LIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHccCCchhccCHHHHhh
Confidence 999999999999999999986
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.6e-32 Score=276.66 Aligned_cols=243 Identities=25% Similarity=0.326 Sum_probs=204.8
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcCCc-EEEEEEcc---ccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTNGR-IVAIKKSK---LVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~-~vavK~~~---~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 464 (700)
..+++.+..||-|+||.|-++.....+ .+|+|+++ ..+..+.+.+..|-.||...+.+.||+++..|.+....|++
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 455666778999999999999976443 37777654 46677788999999999999999999999999999999999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
||-+-+|.|+..|++... ++......++..+++|++|||+++ ||+|||||+|.+|+.+|-+||.|||+++.+..
T Consensus 499 mEaClGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred HHhhcCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 999999999999987654 899999999999999999999999 99999999999999999999999999997754
Q ss_pred CCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchh
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDAR 624 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 624 (700)
. ..+-+.+||+.|.|||++.+...+.++|.||||++++||++|.+||.+.++..-.+++ +.-+ |
T Consensus 573 g--~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I---LkGi---------d-- 636 (732)
T KOG0614|consen 573 G--RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI---LKGI---------D-- 636 (732)
T ss_pred C--CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH---Hhhh---------h--
Confidence 3 3455678999999999999999999999999999999999999999987764432222 1111 1
Q ss_pred hhhccCHHHHHHHHHHHHHHhccCCCCCCC
Q 005355 625 VLKEAKEEEIITVAMLAKRCLNMIGKKRPT 654 (700)
Q Consensus 625 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPs 654 (700)
..+.+........+|++++...+|.+|.-
T Consensus 637 -~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 637 -KIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred -hhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 12334445556778999999999999976
No 390
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.1e-30 Score=271.38 Aligned_cols=209 Identities=26% Similarity=0.402 Sum_probs=180.1
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEE-cCCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcc
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGML-TNGRIVAIKKSKLVD---ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVP 461 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 461 (700)
+....-|..++.||-|+||+|.++.. +....+|+|.+...+ ..+...++.|-.||..-..+.||+|+-.|.+.+.+
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL 704 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL 704 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce
Confidence 33455688899999999999999984 446778999876533 45567788999999999999999999999999999
Q ss_pred eEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 462 LLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 462 ~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
|+||||+++|++..+|.+..- +.++.+..++.++..|+++.|+.| +|||||||+|||||.+|.+||+||||+.-
T Consensus 705 YFVMdYIPGGDmMSLLIrmgI---FeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRMGI---FEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred EEEEeccCCccHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeecccccc
Confidence 999999999999999988753 888899999999999999999999 99999999999999999999999999875
Q ss_pred cccCCc--------e---------------------------------eeeeeecccccccccccccCCCCcccceehHH
Q 005355 542 VMIDQT--------H---------------------------------LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFG 580 (700)
Q Consensus 542 ~~~~~~--------~---------------------------------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG 580 (700)
+..... + .....+||+.|+|||++....++...|.||.|
T Consensus 779 fRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~g 858 (1034)
T KOG0608|consen 779 FRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVG 858 (1034)
T ss_pred ceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhh
Confidence 531100 0 01124699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCchh
Q 005355 581 VVLVELLTGQKPIRSTDSEE 600 (700)
Q Consensus 581 ~il~elltg~~p~~~~~~~~ 600 (700)
||||||+.|+.||....+.+
T Consensus 859 vil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 859 VILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred HHHHHHhhCCCCccCCCCCc
Confidence 99999999999998777654
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-30 Score=237.68 Aligned_cols=210 Identities=26% Similarity=0.414 Sum_probs=174.4
Q ss_pred HHHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc-cChhhHHHHHHHHHHHhh-cCCCceeeEEeEEEeCCc
Q 005355 384 ELEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL-VDESNIEQFINEVAILSQ-INHRNVVKLLGCCLETEV 460 (700)
Q Consensus 384 e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~ 460 (700)
.+++..+....+..||+|++|.|-+.++. +|...|+|++.. .+.+..++.++|+.+..+ ..+|.+|.++|.......
T Consensus 40 ~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 40 NFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred ccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 36677777888889999999999888864 799999998775 344556778889988766 479999999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 461 PLLVYEFIPNGTLYQYIHDQ-TEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
.++.||.| ..||..+-++. .....+++..+-+|+..+++||.|||++-+ ++|||+||+||||+.+|++|++|||++
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIs 196 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGIS 196 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccc
Confidence 99999999 56888776542 234569999999999999999999999753 999999999999999999999999999
Q ss_pred cccccCCceeeeeeeccccccccccccc----CCCCcccceehHHHHHHHHHhCCCCCCCCCc
Q 005355 540 RSVMIDQTHLTTRVQGTFGYLDPEYFRS----SQFTEKSDVYSFGVVLVELLTGQKPIRSTDS 598 (700)
Q Consensus 540 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDVwSlG~il~elltg~~p~~~~~~ 598 (700)
..+.. +-..+...|-..|||||.+.. ..|+.|+||||||+++.||.+++.||+....
T Consensus 197 G~L~d--SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 197 GYLVD--SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred eeehh--hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 75421 112222457789999999854 4789999999999999999999999986554
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.9e-31 Score=252.63 Aligned_cols=263 Identities=25% Similarity=0.320 Sum_probs=201.8
Q ss_pred CccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCC-----cceEE
Q 005355 393 NTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETE-----VPLLV 464 (700)
Q Consensus 393 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 464 (700)
+-.+.||.|+||.||..++. +|+.||+|++...- -...+.+.+|+++|..++|.|++..++.....+ +.|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34478999999999999964 89999999977532 234578999999999999999999998765443 44678
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
.|.| ..+|..+|-.. ..++.+.+.-+..||++||.|||+.+ |.||||||.|.|++.|-.+||+|||+++.-..
T Consensus 136 TELm-QSDLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 136 TELM-QSDLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHH-HhhhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccch
Confidence 8888 44677766533 34899999999999999999999999 99999999999999999999999999997766
Q ss_pred CCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHH-----HH---Hhc
Q 005355 545 DQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLE-----AM---KEN 615 (700)
Q Consensus 545 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~-----~~---~~~ 615 (700)
++...++..+.|..|.|||++.+ ..|+.+.||||.|||+.||+..+..|....+-+...++...+. .+ -++
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 66666777788999999999987 4699999999999999999999999987776665444433221 11 111
Q ss_pred chhhhcchhhhh---------ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 005355 616 RLFEVLDARVLK---------EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 616 ~~~~~~d~~~~~---------~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L 662 (700)
....++...... ..+...-.+...+...++..+|+.|.+..+.+..+
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 111111111100 00112223456788889999999999999988765
No 393
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.5e-29 Score=255.60 Aligned_cols=263 Identities=26% Similarity=0.330 Sum_probs=196.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcC-----C---CceeeEEeEEEe--
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQIN-----H---RNVVKLLGCCLE-- 457 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~-- 457 (700)
..+|.+.++||.|.|++||++.+. +.+.||+|+.+..... .+....||++|++++ | .+||+|++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 478999999999999999999965 5788999998764332 366789999999983 3 469999999974
Q ss_pred --CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC-------
Q 005355 458 --TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK------- 528 (700)
Q Consensus 458 --~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~------- 528 (700)
..+.+||+|++ +-+|..+|.....++ ++...+..|++||+.||.|||... .|||.||||+|||+..+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrG-lpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~e~~~~~~ 231 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRG-LPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCSTEIDPAKD 231 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCC-CcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeeccccchhhh
Confidence 45789999999 778999998765544 999999999999999999999875 39999999999999300
Q ss_pred --------------------------------------------------------------------------------
Q 005355 529 -------------------------------------------------------------------------------- 528 (700)
Q Consensus 529 -------------------------------------------------------------------------------- 528 (700)
T Consensus 232 ~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~ 311 (590)
T KOG1290|consen 232 AREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRING 311 (590)
T ss_pred hhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCc
Confidence
Q ss_pred -------------------------------------------------------------------------------C
Q 005355 529 -------------------------------------------------------------------------------Y 529 (700)
Q Consensus 529 -------------------------------------------------------------------------------~ 529 (700)
.
T Consensus 312 ~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di 391 (590)
T KOG1290|consen 312 NESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDI 391 (590)
T ss_pred cccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccce
Confidence 0
Q ss_pred cEEEeecCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCch---hhhhHHH
Q 005355 530 RAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSE---EDKSLVG 606 (700)
Q Consensus 530 ~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~---~~~~~~~ 606 (700)
++||+|||-+.-.. ..++..+.|..|+|||++.+..|+..+||||++|++|||+||...|+...-+ .+.+.+.
T Consensus 392 ~vKIaDlGNACW~~----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA 467 (590)
T KOG1290|consen 392 RVKIADLGNACWVH----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA 467 (590)
T ss_pred eEEEeeccchhhhh----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence 13444444443221 1122334688899999999999999999999999999999999999755432 2222233
Q ss_pred HHHHHHHh-------------------cchhh-------hcchhhh--hccCHHHHHHHHHHHHHHhccCCCCCCCHHHH
Q 005355 607 YFLEAMKE-------------------NRLFE-------VLDARVL--KEAKEEEIITVAMLAKRCLNMIGKKRPTMKEA 658 (700)
Q Consensus 607 ~~~~~~~~-------------------~~~~~-------~~d~~~~--~~~~~~~~~~l~~li~~cl~~~p~~RPs~~ev 658 (700)
.+.+..-. +.+.. -+...+. -+.+.+...++.+++.-||+.+|++|||+.+.
T Consensus 468 ~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~c 547 (590)
T KOG1290|consen 468 LIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQC 547 (590)
T ss_pred HHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHH
Confidence 22222211 11100 0111111 13467788899999999999999999999999
Q ss_pred HH
Q 005355 659 AF 660 (700)
Q Consensus 659 l~ 660 (700)
++
T Consensus 548 l~ 549 (590)
T KOG1290|consen 548 LK 549 (590)
T ss_pred hc
Confidence 96
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=7e-30 Score=276.98 Aligned_cols=245 Identities=27% Similarity=0.387 Sum_probs=189.4
Q ss_pred CCccceEeeeCCeE-EEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 392 FNTNRILGQGGQGT-VYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 392 ~~~~~~lG~G~fg~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
|.-.+++|.|..|+ ||+|... ++.||||++-. ...+...+|+..|+.- +||||+++++.-.++...||..|.+
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 45567799999985 7999986 88999998763 3335578999999987 6999999999999999999999999
Q ss_pred CCCHHHHHhccCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC-----CCcEEEeecCCCcccc
Q 005355 470 NGTLYQYIHDQTEE-FPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD-----KYRAKVSDFGASRSVM 543 (700)
Q Consensus 470 ~gsL~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~-----~~~~kl~DfGl~~~~~ 543 (700)
..+|.+++...... ........+.+..|+++||++||+.+ ||||||||.||||+. ..+++|+|||+++...
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 56999999874111 11121445778899999999999999 999999999999965 3579999999999887
Q ss_pred cCCcee--eeeeecccccccccccccCCCCcccceehHHHHHHHHHhC-CCCCCCCCchhhhhHHHHHHHHHHhcchhhh
Q 005355 544 IDQTHL--TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTG-QKPIRSTDSEEDKSLVGYFLEAMKENRLFEV 620 (700)
Q Consensus 544 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (700)
.+.... .....||.+|+|||++.....+.++|||||||++|+.++| ..||...-..+. + +..+...
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-N--------Il~~~~~-- 731 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-N--------ILTGNYT-- 731 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-h--------hhcCccc--
Confidence 665443 3356799999999999999989999999999999999985 899975432211 0 1111100
Q ss_pred cchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 621 LDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 621 ~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+. ..... .+. +..+||.+|++.+|..||++.+|+.
T Consensus 732 L~--~L~~~-~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 732 LV--HLEPL-PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ee--eeccC-chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00 00000 111 6778999999999999999999975
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=4.9e-29 Score=232.05 Aligned_cols=255 Identities=23% Similarity=0.316 Sum_probs=192.9
Q ss_pred hcCCCccceEeeeCCeEEEEEE-EcCCcEEEEEEccccChhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeC--CcceEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN-HRNVVKLLGCCLET--EVPLLV 464 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 464 (700)
.++|++.+++|+|.++.||.|. ..+.++++||+++. ...+.+.+|+.||..|. ||||+++++...+. ..+.||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 5788999999999999999999 45788999999984 44477899999999997 99999999998765 466799
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC-CcEEEeecCCCcccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDFGASRSVM 543 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~-~~~kl~DfGl~~~~~ 543 (700)
+||+.+.+...+... ++...+..++.++++||.|+|+.| |.|||+||.|++||.. ..++|+|+|++....
T Consensus 114 FE~v~n~Dfk~ly~t------l~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYPT------LTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhhccccHHHHhhh------hchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcC
Confidence 999988877666532 778889999999999999999999 9999999999999864 579999999998765
Q ss_pred cCCceeeeeeeccccccccccccc-CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHH--------HHHHHh
Q 005355 544 IDQTHLTTRVQGTFGYLDPEYFRS-SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYF--------LEAMKE 614 (700)
Q Consensus 544 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~--------~~~~~~ 614 (700)
+..... ..+.+..|--||.+-. +.|+..-|+|||||+|..|+..+.||....... ++++..+ ......
T Consensus 185 p~~eYn--VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~-DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 185 PGKEYN--VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred CCceee--eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH-HHHHHHHHHhChHHHHHHHHH
Confidence 444332 2234566789998865 557788999999999999999998885333221 1111111 000000
Q ss_pred cchhhhcchhhhh----------------ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 615 NRLFEVLDARVLK----------------EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 615 ~~~~~~~d~~~~~----------------~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
.. -.+|++... +...-..++..+|+.+.|..|..+|||++|...
T Consensus 262 Y~--i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 262 YQ--IDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred Hc--cCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 00 012221111 111122467889999999999999999999876
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=3.4e-27 Score=232.09 Aligned_cols=210 Identities=38% Similarity=0.581 Sum_probs=183.8
Q ss_pred EeeeCCeEEEEEEEcC-CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHHH
Q 005355 398 LGQGGQGTVYKGMLTN-GRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQ 475 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 475 (700)
||+|.+|.||++...+ ++.+++|+....... ..+.+.+|++.++.++|++++++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999864 899999998865443 45789999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC-CCcEEEeecCCCcccccCCceeeeeee
Q 005355 476 YIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGASRSVMIDQTHLTTRVQ 554 (700)
Q Consensus 476 ~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~-~~~~kl~DfGl~~~~~~~~~~~~~~~~ 554 (700)
++.... ..+++..++.++.+++++|++||+.+ ++|+||+|.||+++. ++.++|+|||.+........ ......
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~ 154 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIV 154 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhccc
Confidence 998653 23899999999999999999999999 999999999999999 89999999999976543321 123345
Q ss_pred cccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHH
Q 005355 555 GTFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEE 633 (700)
Q Consensus 555 gt~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 633 (700)
+...|++||.+... ..+.++|+|++|+++++|
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------- 187 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------- 187 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence 78899999999887 888999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 634 IITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 634 ~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 356779999999999999999999865
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-28 Score=256.01 Aligned_cols=197 Identities=24% Similarity=0.369 Sum_probs=170.4
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC--------hhhHHHHHHHHHHHhhcC---CCceeeEEeEEE
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD--------ESNIEQFINEVAILSQIN---HRNVVKLLGCCL 456 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~ 456 (700)
..+|..++.+|+|+||.|+.+.++ +...|+||.++... ....-.+-.|++||..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 456888999999999999999987 46678999765421 111223556999999997 999999999999
Q ss_pred eCCcceEEEeeCC-CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEee
Q 005355 457 ETEVPLLVYEFIP-NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535 (700)
Q Consensus 457 ~~~~~~lv~E~~~-~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~D 535 (700)
+++..+|++|-.. +-+|.++|..+.+ +++.++..|++|++.|+++||+++ |||||||-+|++++.+|-+||+|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp~---m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKPR---MDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccCc---cchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEee
Confidence 9999999999875 4589999988765 999999999999999999999999 99999999999999999999999
Q ss_pred cCCCcccccCCceeeeeeecccccccccccccCCCC-cccceehHHHHHHHHHhCCCCCC
Q 005355 536 FGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT-EKSDVYSFGVVLVELLTGQKPIR 594 (700)
Q Consensus 536 fGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDVwSlG~il~elltg~~p~~ 594 (700)
||.+... .+.......||..|.|||++.+..|- ..-|||++|++||.++....||.
T Consensus 714 fgsaa~~---ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYT---KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhh---cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998755 34456677899999999999998874 56799999999999999999885
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=6.1e-28 Score=235.92 Aligned_cols=261 Identities=24% Similarity=0.339 Sum_probs=195.2
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccc--cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeC------C
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKL--VDESNIEQFINEVAILSQINHRNVVKLLGCCLET------E 459 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 459 (700)
..+|.-++.+|.|.- .|..+.+. .+++||+|+... .+....++..+|+.++..++|+|+++++.++.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456777788899888 66666544 588999998654 3344467788999999999999999999998644 3
Q ss_pred cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
..++|||+| ..+|...+.-. ++-+.+..+..|++.|++|||+.+ |+||||||+||++..+..+||.|||++
T Consensus 95 e~y~v~e~m-~~nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVILME-----LDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhh-hhHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence 558999999 66899988722 778889999999999999999999 999999999999999999999999999
Q ss_pred cccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHH--------HHHHHH
Q 005355 540 RSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLV--------GYFLEA 611 (700)
Q Consensus 540 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~--------~~~~~~ 611 (700)
+....+ ...+..+.|..|.|||++.+..+.+.+||||+||++.||++|..-|.+.+.-..-... ..+...
T Consensus 166 r~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~q 243 (369)
T KOG0665|consen 166 RTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQ 243 (369)
T ss_pred cccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHH
Confidence 854332 3456677888999999999999999999999999999999999998865522110000 000000
Q ss_pred HH-----------hc---chhhhcchhh-hh--ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 612 MK-----------EN---RLFEVLDARV-LK--EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 612 ~~-----------~~---~~~~~~d~~~-~~--~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
+. +. .+.+.+...+ +. +.+.-......+++.+||..+|++|-+++++|..
T Consensus 244 L~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 244 LQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00 00 0000000000 00 1111233457889999999999999999999873
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=3.9e-28 Score=249.68 Aligned_cols=268 Identities=20% Similarity=0.234 Sum_probs=208.6
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcC------CCceeeEEeEEEe
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQIN------HRNVVKLLGCCLE 457 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~ 457 (700)
-+..-.+|.+.-..|+|-|++|.+|.+. -|..||||++...... .+.=+.|++||++|+ ..|.++++..|..
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 3555678888889999999999999976 4789999999865433 355678999999995 3589999999999
Q ss_pred CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC-CcEEEeec
Q 005355 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK-YRAKVSDF 536 (700)
Q Consensus 458 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~-~~~kl~Df 536 (700)
.++++||+|-+ ..+|.++|++...+..|....+..++.|+.-||..|...+ |+|.||||+|||+++. ..+||+||
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccC
Confidence 99999999988 6799999999887777899999999999999999999999 9999999999999875 57899999
Q ss_pred CCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH-----HH
Q 005355 537 GASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL-----EA 611 (700)
Q Consensus 537 Gl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~-----~~ 611 (700)
|.|.....++ .+....+-.|.|||++.+..|+...|+||+||+||||.||+..|.+........+..... .+
T Consensus 582 GSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Km 658 (752)
T KOG0670|consen 582 GSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKM 658 (752)
T ss_pred cccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHH
Confidence 9986543222 222334557999999999999999999999999999999999998776543222221111 11
Q ss_pred HHhcch---------------------------hhhcch------hh-----hhccCHHHHHHHHHHHHHHhccCCCCCC
Q 005355 612 MKENRL---------------------------FEVLDA------RV-----LKEAKEEEIITVAMLAKRCLNMIGKKRP 653 (700)
Q Consensus 612 ~~~~~~---------------------------~~~~d~------~~-----~~~~~~~~~~~l~~li~~cl~~~p~~RP 653 (700)
+..+.+ ...+.+ .+ ..+........+.+|+.+||..||++|.
T Consensus 659 lRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRi 738 (752)
T KOG0670|consen 659 LRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRI 738 (752)
T ss_pred hhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcC
Confidence 111100 001111 11 1112244566799999999999999999
Q ss_pred CHHHHHH
Q 005355 654 TMKEAAF 660 (700)
Q Consensus 654 s~~evl~ 660 (700)
|..++|.
T Consensus 739 t~nqAL~ 745 (752)
T KOG0670|consen 739 TVNQALK 745 (752)
T ss_pred CHHHHhc
Confidence 9999876
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=2.2e-26 Score=229.68 Aligned_cols=199 Identities=35% Similarity=0.550 Sum_probs=174.7
Q ss_pred CCccceEeeeCCeEEEEEEEcC-CcEEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCC
Q 005355 392 FNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
|++.+.||+|++|.||++...+ ++.+++|.+...... ..+.+.+|++.+++++|+|++++++.+......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5677899999999999999874 889999998865554 67889999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+++|.+++...... +++..+..++.+++.++.+||+.+ ++|+||++.||+++.++.++|+|||.+..........
T Consensus 81 ~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 81 GGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred CCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 99999999865432 789999999999999999999998 9999999999999999999999999998765432112
Q ss_pred eeeeeccccccccccc-ccCCCCcccceehHHHHHHHHHhCCCCCCC
Q 005355 550 TTRVQGTFGYLDPEYF-RSSQFTEKSDVYSFGVVLVELLTGQKPIRS 595 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~-~~~~~s~ksDVwSlG~il~elltg~~p~~~ 595 (700)
.....++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 2344578899999998 667788899999999999999999999964
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=4.6e-28 Score=256.32 Aligned_cols=255 Identities=27% Similarity=0.374 Sum_probs=208.0
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
...++|.++..+|.|+||.|||+++. .++..|||.++........-+.+|+-+++..+|+||+.++|.+...+..++.|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 34678999999999999999999965 68999999999888888888899999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+.+|+|.+.-+... ++++.++....++.++||+|||+.+ -+|||||-.|||+++.+.+|++|||.+..+...
T Consensus 92 EycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitat 165 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITAT 165 (829)
T ss_pred EecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhh
Confidence 9999999999887654 4999999999999999999999999 789999999999999999999999998765322
Q ss_pred Cceeeeeeeccccccccccc---ccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcc
Q 005355 546 QTHLTTRVQGTFGYLDPEYF---RSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLD 622 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~---~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 622 (700)
-.......||+.|||||+. +...|..+.|||++|+...|+---++|....-+.. ++.++..- ..+
T Consensus 166 -i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-------~l~LmTkS----~~q 233 (829)
T KOG0576|consen 166 -IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-------ALFLMTKS----GFQ 233 (829)
T ss_pred -hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-------HHHHhhcc----CCC
Confidence 2234456799999999985 45678999999999999999988887754332211 11122111 111
Q ss_pred hhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 623 ARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 623 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
+.-+++ ...-.+.+.++++.+|..+|++||+++.+++
T Consensus 234 pp~lkD-k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 234 PPTLKD-KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCcccC-CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 111111 2334556888999999999999999987765
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.5e-27 Score=226.01 Aligned_cols=256 Identities=22% Similarity=0.293 Sum_probs=190.9
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeE-EEeCCcceEE
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGC-CLETEVPLLV 464 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lv 464 (700)
..+.|.+.+.||+|.||.+-++.++ ....+++|.+.. ......+|.+|..---.| .|.||+.-++. |...+..+++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~-p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR-PQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc-chhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3578999999999999999999987 466788887654 234457899998776556 59999988875 5667788899
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC--CCCcEEEeecCCCccc
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD--DKYRAKVSDFGASRSV 542 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~--~~~~~kl~DfGl~~~~ 542 (700)
+||.+.|+|.+-+.... +-+..-.+++.|++.||.|||+.+ +||||||.+||||- +..++||+|||+.+..
T Consensus 101 qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred eccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeeccccccc
Confidence 99999999999887644 788888999999999999999999 99999999999993 3458999999998754
Q ss_pred ccCCceeeeeeecccccccccccccC-----CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcch
Q 005355 543 MIDQTHLTTRVQGTFGYLDPEYFRSS-----QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRL 617 (700)
Q Consensus 543 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (700)
.. ......-+..|.+||..... ...+.+|||.||++++.+++|..||+. ....+...++|.. +..+..
T Consensus 174 g~----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk-a~~~d~~Y~~~~~--w~~rk~ 246 (378)
T KOG1345|consen 174 GT----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK-ASIMDKPYWEWEQ--WLKRKN 246 (378)
T ss_pred Cc----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchh-hhccCchHHHHHH--HhcccC
Confidence 21 12223356689999987543 345679999999999999999999983 3333344444332 221111
Q ss_pred hhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 005355 618 FEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGG 664 (700)
Q Consensus 618 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~ 664 (700)
+.++..+ ....+.+..+.++-|..++++|=-..++.++-..
T Consensus 247 -----~~~P~~F-~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 247 -----PALPKKF-NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred -----ccCchhh-cccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 1221221 2344567788899999999999666666555433
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=3.6e-26 Score=231.88 Aligned_cols=265 Identities=24% Similarity=0.357 Sum_probs=197.4
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEc----CCcEEEEEEccccChhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCC
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLT----NGRIVAIKKSKLVDESNIEQFINEVAILSQI-NHRNVVKLLGCCLETE 459 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 459 (700)
+....+.|...++||+|.|++||++++. ..+.||+|.+..... ...+.+|+++|..+ .+.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 4455678899999999999999999954 367899998776433 35689999999998 5999999999999999
Q ss_pred cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC-CCcEEEeecCC
Q 005355 460 VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD-KYRAKVSDFGA 538 (700)
Q Consensus 460 ~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~-~~~~kl~DfGl 538 (700)
...+|+||++.....++... ++...+..+++.++.||+++|++| ||||||||.|+|.+. .+.-.|.|||+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence 99999999999999998865 678899999999999999999999 999999999999975 46789999999
Q ss_pred Cccccc----------------C-----------------C----------ceeeeeeeccccccccccccc-CCCCccc
Q 005355 539 SRSVMI----------------D-----------------Q----------THLTTRVQGTFGYLDPEYFRS-SQFTEKS 574 (700)
Q Consensus 539 ~~~~~~----------------~-----------------~----------~~~~~~~~gt~~y~aPE~~~~-~~~s~ks 574 (700)
+..... . . ........||++|.|||++.. ...+.++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 872100 0 0 000112459999999999865 5688999
Q ss_pred ceehHHHHHHHHHhCCCCCCCCCchhhh--hHHHHHH------HHHHhcc--hh---------------hhcc-hhhhh-
Q 005355 575 DVYSFGVVLVELLTGQKPIRSTDSEEDK--SLVGYFL------EAMKENR--LF---------------EVLD-ARVLK- 627 (700)
Q Consensus 575 DVwSlG~il~elltg~~p~~~~~~~~~~--~~~~~~~------~~~~~~~--~~---------------~~~d-~~~~~- 627 (700)
||||.|||++.++++..||-....+-+. .++..+. -+.-.++ +. +-++ ..+.+
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 9999999999999999999644432111 0000000 0000111 00 0010 00000
Q ss_pred --------ccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 628 --------EAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 628 --------~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
......+..+.+|+.+||..||.+|.|++|.|+
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 001112236889999999999999999999987
No 404
>PF13947 GUB_WAK_bind: Wall-associated receptor kinase galacturonan-binding
Probab=99.92 E-value=1.6e-25 Score=195.01 Aligned_cols=101 Identities=37% Similarity=0.729 Sum_probs=85.6
Q ss_pred CCCcccCcCCeeccCCCCCCCCCCCCCCCeeeeCCCCCCCcceeccccceEEEeeccCCCceEEEeeeeeecccCCCCC-
Q 005355 13 EDLCQYSCGNVTINYPFGIGDGCYFDKRYEVICDDSSGSPKAFLAGVNNLELLNSDRYDGNLLRVNIPVISLKTTGHPN- 91 (700)
Q Consensus 13 ~~~C~~~CG~v~ipyPFg~~~~C~~~~~f~l~C~~~~~~p~~~l~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~- 91 (700)
+++||++||||+||||||||++|++.++|+|+|++++++|+|++.+. +++|++|++++ ++++|..|+++.+......
T Consensus 1 ~~~C~~~CGnv~IpYPFgi~~~C~~~~~F~L~C~~~~~~~~l~l~~~-~~~V~~I~~~~-~~i~v~~~~~~~~~~~~~~~ 78 (106)
T PF13947_consen 1 KPGCPSSCGNVSIPYPFGIGPGCGRDPGFELTCNNNTSPPKLLLSSG-NYEVLSISYEN-GTIRVSDPISSNCYSSSSSN 78 (106)
T ss_pred CCCCCCccCCEeecCCCccCCCCCCCCCcEEECCCCCCCceeEecCC-cEEEEEEecCC-CEEEEEeccccceecCCCCc
Confidence 47899999999999999999999995599999999888899999666 89999999999 9999999987764443221
Q ss_pred ----CcccCCCCeeeccCCceEEEeeccc
Q 005355 92 ----GVNLSGIPLTFSRWHNRFAAIGCRN 116 (700)
Q Consensus 92 ----~~~~~~~pf~~s~~~n~~~~~gC~~ 116 (700)
.+++.. ||.+|+++|+|+++||++
T Consensus 79 ~~~~~~~~~~-~~~~s~~~N~~~~~GC~t 106 (106)
T PF13947_consen 79 SSNSNLSLNG-PFFFSSSSNKFTVVGCNT 106 (106)
T ss_pred ccccEEeecC-CceEccCCcEEEEECCCC
Confidence 233444 899999999999999985
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1.2e-25 Score=265.40 Aligned_cols=195 Identities=19% Similarity=0.213 Sum_probs=139.1
Q ss_pred hcCC-CceeeEEeEE-------EeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 005355 442 QINH-RNVVKLLGCC-------LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPI 513 (700)
Q Consensus 442 ~l~h-~niv~l~~~~-------~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~i 513 (700)
.++| +||+++++.+ .+.+..++++|++ +++|.++|.... ..+++.+++.++.||++||+|||+++ |
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~g---I 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQG---I 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 4555 5788888876 3334567888987 669999997543 34899999999999999999999999 9
Q ss_pred eecCCCCCcEEECCC-------------------CcEEEeecCCCcccccCCc---------------eeeeeeeccccc
Q 005355 514 YHRDIKSANILLDDK-------------------YRAKVSDFGASRSVMIDQT---------------HLTTRVQGTFGY 559 (700)
Q Consensus 514 vH~Dik~~NILl~~~-------------------~~~kl~DfGl~~~~~~~~~---------------~~~~~~~gt~~y 559 (700)
+||||||+||||+.. +.+|++|||+++....... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 999999999999654 4556666666653210000 001113478889
Q ss_pred ccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHH
Q 005355 560 LDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAM 639 (700)
Q Consensus 560 ~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~ 639 (700)
||||++.+..++.++|||||||+||||++|..|+..... .. ..+.. ..+.+.. .........
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-----~~----~~~~~----~~~~~~~-----~~~~~~~~~ 243 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-----TM----SSLRH----RVLPPQI-----LLNWPKEAS 243 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-----HH----HHHHH----hhcChhh-----hhcCHHHHH
Confidence 999999999999999999999999999998887642110 00 00110 0111111 112334567
Q ss_pred HHHHHhccCCCCCCCHHHHHH
Q 005355 640 LAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 640 li~~cl~~~p~~RPs~~evl~ 660 (700)
++.+||+.+|.+||++.|+++
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHhCCCChhhCcChHHHhh
Confidence 889999999999999999986
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=2.6e-24 Score=206.71 Aligned_cols=170 Identities=22% Similarity=0.263 Sum_probs=128.0
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceee
Q 005355 471 GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLT 550 (700)
Q Consensus 471 gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~ 550 (700)
|+|.++++.... .+++..++.++.|++.||+|||+++ ||+|||++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc----
Confidence 689999986432 4999999999999999999999876 999999999999999 99987543221
Q ss_pred eeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccC
Q 005355 551 TRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAK 630 (700)
Q Consensus 551 ~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 630 (700)
..|++.|||||++.+..++.++||||||+++|||++|+.||....... .........+..... .+. ...
T Consensus 64 --~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~---~~~----~~~ 132 (176)
T smart00750 64 --SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPADDP---RDR----SNL 132 (176)
T ss_pred --CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhccCCc---ccc----ccH
Confidence 258899999999999999999999999999999999999996443211 111111111111000 000 001
Q ss_pred HHHH--HHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhh
Q 005355 631 EEEI--ITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRAS 668 (700)
Q Consensus 631 ~~~~--~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~ 668 (700)
.... ..+.+++.+||+.+|++||++.|+++.+..+...
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 1222 2689999999999999999999999998776543
No 407
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.9e-23 Score=218.09 Aligned_cols=262 Identities=22% Similarity=0.240 Sum_probs=199.8
Q ss_pred CCCccceEeeeCCeEEEEEEEcCC--cEEEEEEccccChhhHHHHHHHHHHHhhcCC----CceeeEEeEE-EeCCcceE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLTNG--RIVAIKKSKLVDESNIEQFINEVAILSQINH----RNVVKLLGCC-LETEVPLL 463 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l 463 (700)
+|.+.++||+|+||.||++..... ..+|+|............+..|..++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 899999999999999999997643 4789998765433333368889999988863 6899999988 47778899
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC-----CcEEEeecCC
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK-----YRAKVSDFGA 538 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~-----~~~kl~DfGl 538 (700)
||+.+ +.+|.++..... ...++....+.++.|++.+|.+||+.| ++||||||.|+++... ..+.|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 889999887665 345999999999999999999999999 9999999999999754 4699999999
Q ss_pred Cc--ccccCCce----e---eeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHH
Q 005355 539 SR--SVMIDQTH----L---TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFL 609 (700)
Q Consensus 539 ~~--~~~~~~~~----~---~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~ 609 (700)
++ ........ . .....||..|.+++...+...+.+.|+||++.++.||+.|..||........... +.
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~---~~ 250 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK---FE 250 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH---HH
Confidence 99 33222211 1 2235599999999999999999999999999999999999999976553322111 11
Q ss_pred HHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhc
Q 005355 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669 (700)
Q Consensus 610 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~ 669 (700)
...... .... .....+..+.++...+-..+..++|....+...|+......
T Consensus 251 ~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 251 KDPRKL----LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHhhhh----cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 111111 1110 11122344555666666689999999999999987776554
No 408
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-23 Score=197.31 Aligned_cols=267 Identities=19% Similarity=0.232 Sum_probs=209.7
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEE-EcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCC-CceeeEEeEEEeCCcceE
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH-RNVVKLLGCCLETEVPLL 463 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~l 463 (700)
.+..+.|+++++||.|+||.+|.|. ..+|+.||||..+.. ....++..|..+.+.|++ ..|..+..+..+.+.-.+
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 3456889999999999999999999 458999999986642 223567889999999975 678888888889999999
Q ss_pred EEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC---CCCcEEEeecCCCc
Q 005355 464 VYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD---DKYRAKVSDFGASR 540 (700)
Q Consensus 464 v~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~---~~~~~kl~DfGl~~ 540 (700)
|||.+ +.+|.++..-..++ ++.+.++.++-|++.-++|+|.++ ++||||||+|+|.. ....+.++|||+++
T Consensus 89 VMdLL-GPsLEdLfnfC~R~--ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNFCSRR--FTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eeecc-CccHHHHHHHHhhh--hhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchh
Confidence 99999 88999998766544 888999999999999999999999 99999999999995 44579999999999
Q ss_pred ccccCCce------eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHh
Q 005355 541 SVMIDQTH------LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKE 614 (700)
Q Consensus 541 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 614 (700)
........ ......||.+|.+-....+...+.+.|+-|+|.+|..+.-|..||++..........+.+.+....
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s 242 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMS 242 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcC
Confidence 77543222 234466999999998888888999999999999999999999999987765544333322221111
Q ss_pred cchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhc
Q 005355 615 NRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669 (700)
Q Consensus 615 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~ 669 (700)
. ..+......+.++...+.-|-...-++-|...-+.+.++-|...+
T Consensus 243 -----~----~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l 288 (341)
T KOG1163|consen 243 -----T----PIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL 288 (341)
T ss_pred -----C----CHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence 0 111122334556777888888889999999888888776665443
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1e-22 Score=199.92 Aligned_cols=266 Identities=17% Similarity=0.218 Sum_probs=209.0
Q ss_pred HHhcCCCccceEeeeCCeEEEEEE-EcCCcEEEEEEccccChhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcceEE
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGM-LTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 464 (700)
+..-.|++.++||+|.||.++.|+ +-+++.||||......+ ..+++.|.+.++.|. .+.|..++-+-.+..+-.||
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 346689999999999999999999 44799999998665333 356888999999984 79999999988899899999
Q ss_pred EeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC-----CCcEEEeecCCC
Q 005355 465 YEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD-----KYRAKVSDFGAS 539 (700)
Q Consensus 465 ~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~-----~~~~kl~DfGl~ 539 (700)
+|++ +.||+|+..-..+. ++.+.+..+|.|++.-++|+|++. +|.|||||+|+||.. ...+.|+|||++
T Consensus 103 idLL-GPSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhh-CcCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9999 88999988655443 899999999999999999999999 999999999999953 346899999999
Q ss_pred cccccCCce------eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH
Q 005355 540 RSVMIDQTH------LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613 (700)
Q Consensus 540 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 613 (700)
+........ ......||.+||+-....+.+.+.+.|+-|||-+++..|-|..||.+...+..+...+.+.+...
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr 256 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR 256 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence 987544332 23456799999999999999999999999999999999999999998877665443332222111
Q ss_pred hcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhc
Q 005355 614 ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669 (700)
Q Consensus 614 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~ 669 (700)
.-.+ .+.....+.+++.-+.-.-..+-.+-|..+-+...+..+...+
T Consensus 257 ~T~i---------~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 257 STPI---------EVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred cCCH---------HHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 1111 1122234445555555555678889999988888777766544
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=7.6e-23 Score=215.25 Aligned_cols=168 Identities=20% Similarity=0.153 Sum_probs=131.6
Q ss_pred HHHHHhcCCCccceEeeeCCeEEEEEEEc--CCcEEEEEEcccc-----ChhhHHHHHHHHHHHhhcCCCceee-EEeEE
Q 005355 384 ELEMATDNFNTNRILGQGGQGTVYKGMLT--NGRIVAIKKSKLV-----DESNIEQFINEVAILSQINHRNVVK-LLGCC 455 (700)
Q Consensus 384 e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~ 455 (700)
......++|++.+.||+|+||+||+|.++ +++.||||+.... .....+.|.+|+++|++++|+|++. +++
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~-- 89 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA-- 89 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE--
Confidence 34455788999999999999999999875 5777899986432 2234567999999999999999985 443
Q ss_pred EeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCcEEECCCCcEEEe
Q 005355 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDI-KSANILLDDKYRAKVS 534 (700)
Q Consensus 456 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Di-k~~NILl~~~~~~kl~ 534 (700)
.+..+|||||+++++|.. +.. .. ...++.|+++||.|||+++ |+|||| ||+|||++.++.+||+
T Consensus 90 --~~~~~LVmE~~~G~~L~~-~~~------~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLi 154 (365)
T PRK09188 90 --TGKDGLVRGWTEGVPLHL-ARP------HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVI 154 (365)
T ss_pred --cCCcEEEEEccCCCCHHH-hCc------cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEE
Confidence 246799999999999963 211 11 1467889999999999999 999999 9999999999999999
Q ss_pred ecCCCcccccCCce-------eeeeeecccccccccccccC
Q 005355 535 DFGASRSVMIDQTH-------LTTRVQGTFGYLDPEYFRSS 568 (700)
Q Consensus 535 DfGl~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~ 568 (700)
|||+++.+...... ......+++.|+|||++...
T Consensus 155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99999876432211 11345688899999998654
No 411
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=6.4e-24 Score=202.59 Aligned_cols=252 Identities=19% Similarity=0.329 Sum_probs=194.8
Q ss_pred CCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccC--hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVD--ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
...+..+|.+...|..|+|+|+ |..+++|++...+ .....+|.+|.-.|+.+.||||+.+++.|.....+.++..||
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 3444567889999999999998 4555667665432 233467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCce
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTH 548 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~ 548 (700)
+.|+|+.+|+.... ..++..++.+++.++++|++|||+...+ |.---|.++.++||++.+++|+--. .+ + +.
T Consensus 270 p~gslynvlhe~t~-vvvd~sqav~faldiargmaflhslep~-ipr~~lns~hvmidedltarismad-~k-f----sf 341 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLEPM-IPRFYLNSKHVMIDEDLTARISMAD-TK-F----SF 341 (448)
T ss_pred cchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcchh-hhhhhcccceEEecchhhhheeccc-ce-e----ee
Confidence 99999999998643 3467889999999999999999998742 4444689999999999998875211 11 0 01
Q ss_pred eeeeeecccccccccccccCCC---CcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhh
Q 005355 549 LTTRVQGTFGYLDPEYFRSSQF---TEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARV 625 (700)
Q Consensus 549 ~~~~~~gt~~y~aPE~~~~~~~---s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 625 (700)
........+.||+||.++..+- -.++|+|||.++||||.|...||....+.|..- .+.-..+
T Consensus 342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm---------------kialegl 406 (448)
T KOG0195|consen 342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM---------------KIALEGL 406 (448)
T ss_pred eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh---------------hhhhccc
Confidence 1111234678999999987653 357999999999999999999998776554321 1122233
Q ss_pred hhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 626 LKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 626 ~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
.-..++.....+..|+.-|++.||.+||.+..++-.|++++
T Consensus 407 rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 34456667788999999999999999999999999998864
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=2.3e-20 Score=196.47 Aligned_cols=261 Identities=31% Similarity=0.401 Sum_probs=198.9
Q ss_pred CCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChh---hHHHHHHHHHHHhhcCCC-ceeeEEeEEEeCCcceEEEee
Q 005355 392 FNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDES---NIEQFINEVAILSQINHR-NVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~E~ 467 (700)
|.+.+.||.|+|+.||++... ..+++|.+...... ....+.+|+.++..+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 677889999999999999987 78899987653322 467899999999999988 799999999777778999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCC-cEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKY-RAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~-~~kl~DfGl~~~~~~~~ 546 (700)
+.+++|.+++........++......++.|++.++.|+|+.+ ++|||+||+||+++... .+++.|||+++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977765432124889999999999999999999999 99999999999999988 79999999998554333
Q ss_pred ce-----eeeeeeccccccccccccc---CCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchh
Q 005355 547 TH-----LTTRVQGTFGYLDPEYFRS---SQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLF 618 (700)
Q Consensus 547 ~~-----~~~~~~gt~~y~aPE~~~~---~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (700)
.. ......++..|+|||.+.. .......|+|++|++++++++|..||...... .........+......
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTP 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCc
Confidence 22 2456679999999999988 57889999999999999999999997655431 0001111111111100
Q ss_pred hhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 619 EVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 619 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.................+.+++.+++..+|..|.++.+....
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 -SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred -ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000001223467889999999999999999887764
No 413
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=4.2e-22 Score=221.92 Aligned_cols=251 Identities=19% Similarity=0.259 Sum_probs=184.7
Q ss_pred CCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccC-hhhHHHHHHHHHH--HhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVD-ESNIEQFINEVAI--LSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
++...+.||.+.|=+|.+|++++|. |+||++-..+ .-....|.++++- ...++|||.+.+.-+-......|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 6778899999999999999998887 8889865433 3344445444443 4556899999998887777788899999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccc--cC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM--ID 545 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~--~~ 545 (700)
+. -+|+|.|....- +..-+...|+.||+.||..+|..+ |.|||||.+||||+.-.-+.|+||.--+... .+
T Consensus 103 vk-hnLyDRlSTRPF---L~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 103 VK-HNLYDRLSTRPF---LVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred Hh-hhhhhhhccchH---HHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 84 489998876543 778889999999999999999999 9999999999999999899999998665432 22
Q ss_pred Cc----eeeeeeecccccccccccccC----------C-CCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHH
Q 005355 546 QT----HLTTRVQGTFGYLDPEYFRSS----------Q-FTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFL 609 (700)
Q Consensus 546 ~~----~~~~~~~gt~~y~aPE~~~~~----------~-~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 609 (700)
+. ..+.+.....+|+|||.+... . .+++.||||+||++.||++ |++||.-. ++..
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~a--- 246 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLLA--- 246 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHHh---
Confidence 22 223333455689999987441 2 5778999999999999998 68888522 1111
Q ss_pred HHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhc
Q 005355 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGI 665 (700)
Q Consensus 610 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l 665 (700)
.+.+. .......++..+ ...++.|+..|++.||.+|.+++++|+.-+++
T Consensus 247 --Yr~~~--~~~~e~~Le~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 247 --YRSGN--ADDPEQLLEKIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred --HhccC--ccCHHHHHHhCc---CccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 11111 001111111111 12577899999999999999999999985443
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=5.9e-22 Score=222.08 Aligned_cols=253 Identities=21% Similarity=0.283 Sum_probs=189.9
Q ss_pred CccceEeeeCCeEEEEEEEc-CCcEEEEEEcc-----ccChhh-HHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 393 NTNRILGQGGQGTVYKGMLT-NGRIVAIKKSK-----LVDESN-IEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 393 ~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~-----~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
...+++|.|.+|.|+..... ..+..+.|... ...... ...+..|+.+-..+.|+|++..+....+.....-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 45678999999977777643 33444444322 111111 222667888888899999988888777776666669
Q ss_pred eeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 466 EFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 466 E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
||+++ +|..++.... .+....+..++.|++.|++|||+.| |.|||+|++|++++.++.+||+|||.+..+..+
T Consensus 401 E~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 9999998752 2888899999999999999999999 999999999999999999999999999877544
Q ss_pred Cc---eeeeeeecccccccccccccCCCCc-ccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhc
Q 005355 546 QT---HLTTRVQGTFGYLDPEYFRSSQFTE-KSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVL 621 (700)
Q Consensus 546 ~~---~~~~~~~gt~~y~aPE~~~~~~~s~-ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (700)
.. .......|+..|+|||++.+..|.. ..||||.|+++..|++|+.||......+... . .+.......+.
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~-~~~~~~~~~~~ 547 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----K-TNNYSDQRNIF 547 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----h-hhccccccccc
Confidence 33 4556678999999999999999876 6899999999999999999998665443321 0 01110000000
Q ss_pred chhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 622 DARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 622 d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
. -........+.+...++.+||+.+|.+|.|+++|++
T Consensus 548 ~--~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 548 E--GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred c--ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 0 011122344556788999999999999999999986
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=1.2e-20 Score=184.70 Aligned_cols=173 Identities=12% Similarity=0.143 Sum_probs=135.6
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhh---HHH------HHHHHHHHhhcCCCceeeEEeEEE
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESN---IEQ------FINEVAILSQINHRNVVKLLGCCL 456 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~---~~~------~~~E~~~l~~l~h~niv~l~~~~~ 456 (700)
....++|+..++||.|+||.||+... ++..+|||.+....... ... +.+|+..+.+++|++|..+.+++.
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 56689999999999999999999766 57789999986433222 222 578999999999999999998866
Q ss_pred eC--------CcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC
Q 005355 457 ET--------EVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK 528 (700)
Q Consensus 457 ~~--------~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~ 528 (700)
.. ...+|+|||++|.+|.++.. ++. ....+++.+|..||+.+ ++|||++|.||+++++
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~ 171 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKN 171 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCC
Confidence 43 34689999999999988742 332 24569999999999999 9999999999999998
Q ss_pred CcEEEeecCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHHHH
Q 005355 529 YRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELL 587 (700)
Q Consensus 529 ~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ell 587 (700)
+ ++|+|||.......+... ..++....+..++|+|+||+++..+.
T Consensus 172 g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 8 999999988654221111 01344456678999999999987654
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=6.9e-20 Score=177.43 Aligned_cols=139 Identities=19% Similarity=0.175 Sum_probs=107.7
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccccChh--h------------------------HHHHHHHHHHHhhcCCCce
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDES--N------------------------IEQFINEVAILSQINHRNV 448 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~ni 448 (700)
...||+|+||.||+|...+|+.||||+++..... . ......|++++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999878999999987653211 0 1122359999999987776
Q ss_pred eeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCCCCCcEEECC
Q 005355 449 VKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYL-HSAASIPIYHRDIKSANILLDD 527 (700)
Q Consensus 449 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~~~~ivH~Dik~~NILl~~ 527 (700)
....... ....+|||||+++++|...+... ..+++..+..++.|++.+|.+| |+.+ |+||||||+|||+++
T Consensus 82 ~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~~ 153 (190)
T cd05147 82 PCPEPIL--LKSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYHD 153 (190)
T ss_pred CCCcEEE--ecCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEEC
Confidence 4333222 22348999999988776553322 2488999999999999999999 6888 999999999999984
Q ss_pred CCcEEEeecCCCccc
Q 005355 528 KYRAKVSDFGASRSV 542 (700)
Q Consensus 528 ~~~~kl~DfGl~~~~ 542 (700)
+.++|+|||++...
T Consensus 154 -~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 -GKLYIIDVSQSVEH 167 (190)
T ss_pred -CcEEEEEccccccC
Confidence 78999999999643
No 417
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81 E-value=9e-20 Score=183.85 Aligned_cols=233 Identities=21% Similarity=0.294 Sum_probs=151.5
Q ss_pred CCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccC---hhhHHHHHHHHHHHhhcCC----------CceeeEEeEEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVD---ESNIEQFINEVAILSQINH----------RNVVKLLGCCL 456 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 456 (700)
.+...+.||.|+++.||.+++. .++.+|||+..... ....+++++|......+.+ -.++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3455678999999999999987 58999999755422 2346777777765555322 12222222221
Q ss_pred ---------eC---C-----cceEEEeeCCCCCHHHHHhc---cCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 005355 457 ---------ET---E-----VPLLVYEFIPNGTLYQYIHD---QTE-EFPITWEIRLRIAIEVSDALCYLHSAASIPIYH 515 (700)
Q Consensus 457 ---------~~---~-----~~~lv~E~~~~gsL~~~l~~---~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH 515 (700)
.. . ..+++|+-+ .++|.+++.. ... ...+....++.+..|+++.+++||+.| ++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEe
Confidence 11 1 225677777 6788888643 221 123455667778899999999999999 999
Q ss_pred cCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeeeeccccccccccccc--------CCCCcccceehHHHHHHHHH
Q 005355 516 RDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRS--------SQFTEKSDVYSFGVVLVELL 587 (700)
Q Consensus 516 ~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~ksDVwSlG~il~ell 587 (700)
+||+|+|++++.+|.++|+||+....... . ......+..|.+||.... -.++.+.|.|+||+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~--~--~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT--R--YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE--E--EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc--e--eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 99999999999999999999987654321 1 111335578999997643 25788999999999999999
Q ss_pred hCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCC
Q 005355 588 TGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKR 652 (700)
Q Consensus 588 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 652 (700)
++..||........... ...... +.++.+.+||..+|+.+|.+|
T Consensus 245 C~~lPf~~~~~~~~~~~--------------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW--------------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG--------------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc--------------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999986644332111 223444 778889999999999999988
No 418
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.81 E-value=1.5e-19 Score=193.36 Aligned_cols=219 Identities=25% Similarity=0.448 Sum_probs=167.5
Q ss_pred HhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe-eecCC
Q 005355 440 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPI-YHRDI 518 (700)
Q Consensus 440 l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~i-vH~Di 518 (700)
|+.+.|.|+.+++|.+.+....+.|.+|+..|+|.|.+..... .+++.....+.++|++||+|||+.. | +|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~--~~d~~F~~s~~rdi~~Gl~ylh~s~---i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI--KLDYFFILSFIRDISKGLAYLHNSP---IGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc--CccHHHHHHHHHHHHHHHHHHhcCc---ceeeeee
Confidence 3578999999999999999999999999999999999988433 4899999999999999999999876 5 99999
Q ss_pred CCCcEEECCCCcEEEeecCCCccccc-CCceeeeeeecccccccccccccC-------CCCcccceehHHHHHHHHHhCC
Q 005355 519 KSANILLDDKYRAKVSDFGASRSVMI-DQTHLTTRVQGTFGYLDPEYFRSS-------QFTEKSDVYSFGVVLVELLTGQ 590 (700)
Q Consensus 519 k~~NILl~~~~~~kl~DfGl~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~ksDVwSlG~il~elltg~ 590 (700)
++.|.++|..+.+||+|||+...... .............-|.|||.+... ..+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 99999999999999999999876532 111111222245679999998763 2467899999999999999999
Q ss_pred CCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhchhhc
Q 005355 591 KPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIRASI 669 (700)
Q Consensus 591 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~~~~ 669 (700)
.||......+.. .+.+.. ++. .......+.+... .+..+.+..++.+||..+|.+||+++.+...++.+....
T Consensus 156 ~~~~~~~~~~~~--~eii~~-~~~-~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 156 GPFDLRNLVEDP--DEIILR-VKK-GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred CccccccccCCh--HHHHHH-HHh-cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 999875544432 111111 222 1111222222211 144447899999999999999999999999998876543
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=6.6e-19 Score=171.18 Aligned_cols=139 Identities=22% Similarity=0.210 Sum_probs=110.6
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccccChh--------------------------hHHHHHHHHHHHhhcCCCce
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDES--------------------------NIEQFINEVAILSQINHRNV 448 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~ni 448 (700)
.+.||+|+||.||+|...+|+.||||++...... ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999878999999987653211 01234578999999999987
Q ss_pred eeEEeEEEeCCcceEEEeeCCCCCHHHH-HhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEEC
Q 005355 449 VKLLGCCLETEVPLLVYEFIPNGTLYQY-IHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLD 526 (700)
Q Consensus 449 v~l~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~ 526 (700)
.....+... ..+|||||++++++... +... .++......++.|++.+|.+||+ .+ |+||||||+|||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~----~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKDV----PLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhhc----cCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE
Confidence 554443332 34899999998865443 3322 37888999999999999999999 89 99999999999999
Q ss_pred CCCcEEEeecCCCcccc
Q 005355 527 DKYRAKVSDFGASRSVM 543 (700)
Q Consensus 527 ~~~~~kl~DfGl~~~~~ 543 (700)
++.++|+|||++....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 7899999999997653
No 420
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=3.7e-19 Score=203.07 Aligned_cols=202 Identities=22% Similarity=0.318 Sum_probs=165.5
Q ss_pred chHHHHHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcC---CCceeeEEeEEEe
Q 005355 381 TSMELEMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN---HRNVVKLLGCCLE 457 (700)
Q Consensus 381 ~~~e~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 457 (700)
...+.+.....|.+.+.||+|+||+||+|...+++.||+|..+...... |.--.+++.+|+ -+.|..+..+..-
T Consensus 689 ~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 689 PNTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred ccceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHcc
Confidence 3445666778899999999999999999998889999999987655443 222233344443 3445555566667
Q ss_pred CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEEC-------CCCc
Q 005355 458 TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLD-------DKYR 530 (700)
Q Consensus 458 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~-------~~~~ 530 (700)
.+..+||+||.+.|+|.+++...+ .++|...+.++.|++..+.+||..+ |||+||||+|+||. ++.-
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~~~---~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINTNK---VMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred CCcceeeeeccccccHHHhhccCC---CCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccc
Confidence 788899999999999999998443 3999999999999999999999999 99999999999993 3456
Q ss_pred EEEeecCCCcccccC-CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCC
Q 005355 531 AKVSDFGASRSVMID-QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQK 591 (700)
Q Consensus 531 ~kl~DfGl~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~ 591 (700)
++|+|||.+..+..- ........++|-.+-.+|+..+..|+..+|.|.|+.+++-||.|+.
T Consensus 840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999999999876532 3345667789999999999999999999999999999999999964
No 421
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.78 E-value=6.8e-20 Score=195.63 Aligned_cols=225 Identities=26% Similarity=0.306 Sum_probs=179.5
Q ss_pred eEeeeCCeEEEEEE----EcCCcEEEEEEccccChhh--HHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcceEEEeeCC
Q 005355 397 ILGQGGQGTVYKGM----LTNGRIVAIKKSKLVDESN--IEQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
.+|+|.||.|++.. .+.+..+|+|.++...... ......|..++...+ ||.++++...+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37899999999765 3346778888765422211 124566888888886 9999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL 549 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~ 549 (700)
+|.|...+..... .++.....+...++-|++++|+.+ |+|||+|++||+++.+|.+++.|||+++........
T Consensus 81 gg~lft~l~~~~~---f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM---FDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA- 153 (612)
T ss_pred cchhhhccccCCc---hHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence 9999988876653 677777788889999999999999 999999999999999999999999999865433222
Q ss_pred eeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhcc
Q 005355 550 TTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEA 629 (700)
Q Consensus 550 ~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 629 (700)
+||..|||||++. .....+|.||||++++||++|..||.. +. . ..++... -..
T Consensus 154 ----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---~~----~------------~~Il~~~--~~~ 206 (612)
T KOG0603|consen 154 ----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---DT----M------------KRILKAE--LEM 206 (612)
T ss_pred ----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---HH----H------------HHHhhhc--cCC
Confidence 7999999999998 677899999999999999999999975 11 0 0111111 123
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCCCH
Q 005355 630 KEEEIITVAMLAKRCLNMIGKKRPTM 655 (700)
Q Consensus 630 ~~~~~~~l~~li~~cl~~~p~~RPs~ 655 (700)
+.+......+++.+++..+|..|.-.
T Consensus 207 p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 207 PRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred chhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 45666778889999999999999765
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=2.2e-18 Score=164.98 Aligned_cols=187 Identities=16% Similarity=0.070 Sum_probs=139.1
Q ss_pred CccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhh----HHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcceEEEee
Q 005355 393 NTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESN----IEQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 393 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
.+...|++|+||+||.+.. .+.+++.+.+....... ...+.+|+++|+++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3557899999999997766 57788877766544321 235789999999995 5889999886 446999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCcEEECCCCcEEEeecCCCcccccCC
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDI-KSANILLDDKYRAKVSDFGASRSVMIDQ 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Di-k~~NILl~~~~~~kl~DfGl~~~~~~~~ 546 (700)
+.+.+|.+.+.. . ...++.|++.+|.++|++| |+|||| ||+|||++.++.++|+|||++.......
T Consensus 80 I~G~~L~~~~~~---------~-~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR---------G-DLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh---------h-hHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999888654321 1 1357789999999999999 999999 7999999999999999999998543222
Q ss_pred ce----e--------eeeeecccccccccccccC-CCC-cccceehHHHHHHHHHhCCCCCCCCC
Q 005355 547 TH----L--------TTRVQGTFGYLDPEYFRSS-QFT-EKSDVYSFGVVLVELLTGQKPIRSTD 597 (700)
Q Consensus 547 ~~----~--------~~~~~gt~~y~aPE~~~~~-~~s-~ksDVwSlG~il~elltg~~p~~~~~ 597 (700)
.. . ......++.|++|+...-. ..+ ...+.++.|..+|.++|+..+.-...
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 10 0 0012256777777754322 223 56788999999999999988875544
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=1e-17 Score=163.75 Aligned_cols=137 Identities=16% Similarity=0.183 Sum_probs=107.5
Q ss_pred CCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhc-----CCCceeeEEeEEEeCC---c-ce
Q 005355 392 FNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI-----NHRNVVKLLGCCLETE---V-PL 462 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~~ 462 (700)
+.-.+.||+|+||.||. +......+||+.........+.+.+|+.+++.+ .||||+++++++.++. . ..
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34457899999999996 433333479987765455567899999999999 5799999999998874 2 23
Q ss_pred EEEee--CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCcEEECC----CCcEEEee
Q 005355 463 LVYEF--IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDAL-CYLHSAASIPIYHRDIKSANILLDD----KYRAKVSD 535 (700)
Q Consensus 463 lv~E~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL-~~LH~~~~~~ivH~Dik~~NILl~~----~~~~kl~D 535 (700)
+|+|| ..+++|.+++.+.. +++. ..++.|++.++ +|||+++ |+||||||+|||++. +.+++|+|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred EEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 78999 55799999996632 5555 35678888777 9999999 999999999999974 34899999
Q ss_pred cCCC
Q 005355 536 FGAS 539 (700)
Q Consensus 536 fGl~ 539 (700)
|+-+
T Consensus 153 g~G~ 156 (210)
T PRK10345 153 NIGE 156 (210)
T ss_pred CCCC
Confidence 5544
No 424
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.73 E-value=7.6e-19 Score=184.21 Aligned_cols=241 Identities=21% Similarity=0.305 Sum_probs=161.2
Q ss_pred CCccceEeeeCCeEEEEEEEcCC----cEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEe-------EE-----
Q 005355 392 FNTNRILGQGGQGTVYKGMLTNG----RIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLG-------CC----- 455 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-------~~----- 455 (700)
.++.+..+...++.+.......+ +.+..+..+...........+++-.+....|-+..-+.+ ..
T Consensus 246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v 325 (516)
T KOG1033|consen 246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKV 325 (516)
T ss_pred ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccc
Confidence 34445566666666665553322 233444444333233333444444444443333332222 11
Q ss_pred EeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEee
Q 005355 456 LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSD 535 (700)
Q Consensus 456 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~D 535 (700)
.....+++.|+++...+|.++|.+.......++...+.++.|++.|+.| ++ .+|+|+||.||+...+..+||.|
T Consensus 326 ~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgD 399 (516)
T KOG1033|consen 326 GKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGD 399 (516)
T ss_pred ccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhh
Confidence 1133578999999999999999876555558889999999999999999 77 99999999999999999999999
Q ss_pred cCCCcccccCC-----ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHH
Q 005355 536 FGASRSVMIDQ-----THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFL 609 (700)
Q Consensus 536 fGl~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 609 (700)
||+........ ....+...||..||+||.+.+..|+.|+||||||++|+||+. =...+. ...+.
T Consensus 400 Fgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----------r~~t~ 469 (516)
T KOG1033|consen 400 FGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----------RIATL 469 (516)
T ss_pred hhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----------HHHhh
Confidence 99998765444 224456679999999999999999999999999999999998 222211 11122
Q ss_pred HHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHH
Q 005355 610 EAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKE 657 (700)
Q Consensus 610 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~e 657 (700)
..+..+.+ ++....+.+ .=..|+.+++.+.|.+||++.+
T Consensus 470 ~d~r~g~i----p~~~~~d~p-----~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 470 TDIRDGII----PPEFLQDYP-----EEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred hhhhcCCC----ChHHhhcCc-----HHHHHHHHhcCCCcccCchHHH
Confidence 22222222 222222222 2345899999999999995444
No 425
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=6.8e-17 Score=162.59 Aligned_cols=196 Identities=23% Similarity=0.258 Sum_probs=137.8
Q ss_pred CCCceeeEEeEEEe---------------------------CCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHH
Q 005355 444 NHRNVVKLLGCCLE---------------------------TEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAI 496 (700)
Q Consensus 444 ~h~niv~l~~~~~~---------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 496 (700)
+|||||+++++|.+ ....|+||... .-+|..++-... .+......++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC----CchHHHHHHHH
Confidence 59999999987753 22336788766 458888886554 56677778899
Q ss_pred HHHHHHHHHHhcCCCCeeecCCCCCcEEE--CC--CCcEEEeecCCCccccc-----CCceeeeeeeccccccccccccc
Q 005355 497 EVSDALCYLHSAASIPIYHRDIKSANILL--DD--KYRAKVSDFGASRSVMI-----DQTHLTTRVQGTFGYLDPEYFRS 567 (700)
Q Consensus 497 qi~~aL~~LH~~~~~~ivH~Dik~~NILl--~~--~~~~kl~DfGl~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~ 567 (700)
|+++|+.|||+++ |.|||+|++|||| |+ -..+.|+|||.+-.... +........-|.-.-||||+...
T Consensus 349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999999 9999999999999 33 34689999997643221 01111112336667899999854
Q ss_pred CC------CCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHH
Q 005355 568 SQ------FTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLA 641 (700)
Q Consensus 568 ~~------~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li 641 (700)
.+ ...|+|.|+.|.+.||++....||......- .+.. ...+.+ ....+...++.+.+|+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~-L~~r-----~Yqe~q---------LPalp~~vpp~~rqlV 490 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML-LDTR-----TYQESQ---------LPALPSRVPPVARQLV 490 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe-echh-----hhhhhh---------CCCCcccCChHHHHHH
Confidence 32 2369999999999999999999997522110 0000 011111 1223445666788999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 005355 642 KRCLNMIGKKRPTMKEAAFEL 662 (700)
Q Consensus 642 ~~cl~~~p~~RPs~~evl~~L 662 (700)
...|+.||.+|++..-....|
T Consensus 491 ~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 491 FDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHhcCCccccCCccHHHhHH
Confidence 999999999999987666555
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=2.2e-16 Score=156.44 Aligned_cols=134 Identities=23% Similarity=0.306 Sum_probs=113.7
Q ss_pred ceEeeeCCeEEEEEEEcCCcEEEEEEccccCh--------hhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 396 RILGQGGQGTVYKGMLTNGRIVAIKKSKLVDE--------SNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
+.||+|++|.||+|.+ .+..|+||+...... .....+.+|++++..++|+++.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 6799999999999988 577899997543211 1234678899999999999988877777778888999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
+++++|.+++.... + .+..++.+++.+|.+||+.+ ++|+|++|.|||++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986432 2 78899999999999999999 99999999999999 78999999998863
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=2.3e-16 Score=158.08 Aligned_cols=144 Identities=17% Similarity=0.134 Sum_probs=111.5
Q ss_pred hcCCCccceEeeeCCeEEEEEE--EcCCcEEEEEEccccChh------------------------hHHHHHHHHHHHhh
Q 005355 389 TDNFNTNRILGQGGQGTVYKGM--LTNGRIVAIKKSKLVDES------------------------NIEQFINEVAILSQ 442 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~ 442 (700)
..-|++.+.||+|+||.||+|. ..+|+.||||++...... ....+..|++++.+
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3357888999999999999998 457999999987643210 11235689999999
Q ss_pred cCCC--ceeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 005355 443 INHR--NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKS 520 (700)
Q Consensus 443 l~h~--niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~ 520 (700)
+.+. .+.++++. ...++||||+++.+|...+.... .+.......++.||+.+|++||+.+. ++||||||
T Consensus 107 L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~g~--iiH~Dikp 177 (237)
T smart00090 107 LYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKEGE--LVHGDLSE 177 (237)
T ss_pred HHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhcCC--EEeCCCCh
Confidence 9753 34444442 23589999999988876653221 25666778999999999999999873 99999999
Q ss_pred CcEEECCCCcEEEeecCCCccc
Q 005355 521 ANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 521 ~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+||+++ ++.++|+|||.+...
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhcc
Confidence 999999 789999999988643
No 428
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.68 E-value=2.6e-17 Score=184.18 Aligned_cols=209 Identities=26% Similarity=0.355 Sum_probs=147.7
Q ss_pred hcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..+|..+++|-.|+||.||..+++ ..+.+|+|+-+.. .+.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~------lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN------LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccc------hhhhc--cccccCCccee------------------
Confidence 578999999999999999999987 4667888543321 01110 22222233322
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCC-
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQ- 546 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~- 546 (700)
|+=...++... +++... +.+++|||+.+ |+|||+||+|.||+.-|.+|++|||+++......
T Consensus 136 ---gDc~tllk~~g---~lPvdm--------vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ---GDCATLLKNIG---PLPVDM--------VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ---chhhhhcccCC---CCcchh--------hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence 33333333222 244333 78999999999 9999999999999999999999999988542111
Q ss_pred -------------ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHH
Q 005355 547 -------------THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMK 613 (700)
Q Consensus 547 -------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 613 (700)
......++||+.|.|||++..+.|...+|+|++|+|+||.+-|..||.+..+++....+ +.
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v------is 272 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV------IS 272 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh------hh
Confidence 11123457999999999999999999999999999999999999999988777632211 11
Q ss_pred hcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCC
Q 005355 614 ENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPT 654 (700)
Q Consensus 614 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs 654 (700)
.. ....+.....+.+.++++.++|+.+|..|.-
T Consensus 273 d~--------i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 273 DD--------IEWPEEDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred hh--------ccccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 10 0011223445667889999999999999953
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.67 E-value=5.1e-16 Score=152.12 Aligned_cols=141 Identities=22% Similarity=0.196 Sum_probs=110.6
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccCh----------------------hhHHHHHHHHHHHhhcC
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDE----------------------SNIEQFINEVAILSQIN 444 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~ 444 (700)
.....|.+.+.||+|+||.||++...+++.||||++..... .....+..|+.++..+.
T Consensus 12 ~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 91 (198)
T cd05144 12 KRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY 91 (198)
T ss_pred HcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH
Confidence 33334778899999999999999988899999997553221 01123677888999887
Q ss_pred CC--ceeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCc
Q 005355 445 HR--NVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSAN 522 (700)
Q Consensus 445 h~--niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~N 522 (700)
|+ .+...++ ....++||||+++++|.++... .....++.+++.++.++|+.+ ++||||||+|
T Consensus 92 ~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~N 155 (198)
T cd05144 92 EEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFN 155 (198)
T ss_pred HcCCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCccc
Confidence 77 4444443 3455899999999998765421 234678899999999999999 9999999999
Q ss_pred EEECCCCcEEEeecCCCcccc
Q 005355 523 ILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 523 ILl~~~~~~kl~DfGl~~~~~ 543 (700)
|++++++.++|+|||++....
T Consensus 156 ill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 156 ILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EEEcCCCcEEEEECCccccCC
Confidence 999999999999999996553
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=5.8e-16 Score=151.86 Aligned_cols=130 Identities=22% Similarity=0.334 Sum_probs=106.8
Q ss_pred eEeeeCCeEEEEEEEcCCcEEEEEEccccC--------hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeC
Q 005355 397 ILGQGGQGTVYKGMLTNGRIVAIKKSKLVD--------ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFI 468 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 468 (700)
.||+|+||.||+|.+. +..|++|...... ....+++.+|++++..++|+++.....+....+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 4899999999999964 7889999754321 112356788999999999887665555566677779999999
Q ss_pred CCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 469 PNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 469 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++++|.+++.... . .++.+++.+|.+||+.+ ++|+|++|+||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN----D------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH----H------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999875431 1 78999999999999999 99999999999999 78999999998864
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.65 E-value=9.1e-16 Score=173.07 Aligned_cols=137 Identities=20% Similarity=0.287 Sum_probs=112.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcCCcEEEEEE-cc-ccC------hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKK-SK-LVD------ESNIEQFINEVAILSQINHRNVVKLLGCCLETEV 460 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~-~~-~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 460 (700)
...|...++||+|+||+||+|.+.... +++|+ .. ... ....+.+.+|+++++.++|++++....+......
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 344567889999999999999986443 34432 21 111 1224568899999999999999988887777778
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.++||||+++++|.+++. ....++.+++++|.+||+.+ ++||||||+|||+ .++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 899999999999999885 34678999999999999999 9999999999999 57799999999996
Q ss_pred c
Q 005355 541 S 541 (700)
Q Consensus 541 ~ 541 (700)
.
T Consensus 476 ~ 476 (535)
T PRK09605 476 Y 476 (535)
T ss_pred c
Confidence 4
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.7e-14 Score=139.96 Aligned_cols=135 Identities=21% Similarity=0.270 Sum_probs=98.0
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccccChh--hHHHH----------------------HHHHHHHhhcCCC--ce
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDES--NIEQF----------------------INEVAILSQINHR--NV 448 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~E~~~l~~l~h~--ni 448 (700)
.+.||+|+||+||+|...+++.||||++...... ....+ ..|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 5689999999999999888999999986643211 11111 3466666666443 24
Q ss_pred eeEEeEEEeCCcceEEEeeCCCCCHHHH-HhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCcEEEC
Q 005355 449 VKLLGCCLETEVPLLVYEFIPNGTLYQY-IHDQTEEFPITWEIRLRIAIEVSDALCYLHS-AASIPIYHRDIKSANILLD 526 (700)
Q Consensus 449 v~l~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~Dik~~NILl~ 526 (700)
.+.++. ...++||||++++++... +.... .. .....++.+++.++.++|+ .+ |+|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE
Confidence 444443 346899999998543321 11111 11 5678899999999999999 88 99999999999999
Q ss_pred CCCcEEEeecCCCccc
Q 005355 527 DKYRAKVSDFGASRSV 542 (700)
Q Consensus 527 ~~~~~kl~DfGl~~~~ 542 (700)
++.++|+|||.+...
T Consensus 150 -~~~~~liDfg~a~~~ 164 (187)
T cd05119 150 -DGKVYIIDVPQAVEI 164 (187)
T ss_pred -CCcEEEEECcccccc
Confidence 889999999999754
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=3.4e-14 Score=132.08 Aligned_cols=135 Identities=24% Similarity=0.237 Sum_probs=114.1
Q ss_pred ccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCC--CceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 394 TNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH--RNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 394 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .++++++......+..++++||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 45789999999999999864 7899998765433 4678999999999976 58999999888888899999999887
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 472 TLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 472 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
++..+ +......++.+++++|++||......++|+|++|+||++++.+.+++.|||.+..
T Consensus 79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77544 4566678899999999999986434499999999999999989999999998864
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.56 E-value=5.4e-14 Score=141.25 Aligned_cols=135 Identities=19% Similarity=0.293 Sum_probs=105.9
Q ss_pred cceEe-eeCCeEEEEEEEcCCcEEEEEEccccC-------------hhhHHHHHHHHHHHhhcCCCce--eeEEeEEEeC
Q 005355 395 NRILG-QGGQGTVYKGMLTNGRIVAIKKSKLVD-------------ESNIEQFINEVAILSQINHRNV--VKLLGCCLET 458 (700)
Q Consensus 395 ~~~lG-~G~fg~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 458 (700)
...|| .|+.|+||++... +..++||++.... ......+.+|++++.+++|+++ ++.++.....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35788 8999999999875 7788998764311 1234567889999999998775 6777764433
Q ss_pred Cc----ceEEEeeCCC-CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEE
Q 005355 459 EV----PLLVYEFIPN-GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKV 533 (700)
Q Consensus 459 ~~----~~lv~E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl 533 (700)
.. .++|+|++++ .+|.+++... .++.. .+.+|+.+|.+||+.| |+||||||+|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEE
Confidence 22 2599999997 6999988653 25544 3568999999999999 999999999999999889999
Q ss_pred eecCCCcc
Q 005355 534 SDFGASRS 541 (700)
Q Consensus 534 ~DfGl~~~ 541 (700)
+|||.+..
T Consensus 184 IDfg~~~~ 191 (239)
T PRK01723 184 IDFDRGEL 191 (239)
T ss_pred EECCCccc
Confidence 99998864
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.54 E-value=5.6e-16 Score=174.12 Aligned_cols=255 Identities=22% Similarity=0.290 Sum_probs=192.4
Q ss_pred HhcCCCccceEeeeCCeEEEEEEEc--CCcEEEEEEccccC--hhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcce
Q 005355 388 ATDNFNTNRILGQGGQGTVYKGMLT--NGRIVAIKKSKLVD--ESNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVPL 462 (700)
Q Consensus 388 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 462 (700)
....|.+.+.||+|.|+.|-..... ....+|+|...... ....+....|..+-..+. |+|++.+++...+.+..+
T Consensus 18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 3456778888999999999887753 24456777655443 333455566888877776 999999999999999999
Q ss_pred EEEeeCCCCCHHHHH-hccCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeeecCCCCCcEEECCCC-cEEEeecCCC
Q 005355 463 LVYEFIPNGTLYQYI-HDQTEEFPITWEIRLRIAIEVSDALCYLH-SAASIPIYHRDIKSANILLDDKY-RAKVSDFGAS 539 (700)
Q Consensus 463 lv~E~~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~~~~~ivH~Dik~~NILl~~~~-~~kl~DfGl~ 539 (700)
++.|+..++++.+.+ +.... ..+......++.|+..++.|+| ..+ +.|+||||+|.+++..+ .++++|||++
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~--~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDST--GTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred cccCcccccccccccccCCcc--CCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhh
Confidence 999999999999988 43321 2666777789999999999999 888 99999999999999999 9999999999
Q ss_pred ccccc--CCceeeeeeec-ccccccccccccC-CCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhc
Q 005355 540 RSVMI--DQTHLTTRVQG-TFGYLDPEYFRSS-QFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKEN 615 (700)
Q Consensus 540 ~~~~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 615 (700)
..+.. ..........| ++.|+|||...+. ......|+||.|+++.-+++|..||......... .. ..+...
T Consensus 173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~----~~~~~~ 247 (601)
T KOG0590|consen 173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YS----SWKSNK 247 (601)
T ss_pred ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ce----eecccc
Confidence 88765 23333445568 9999999999885 4567899999999999999999999765543311 11 111110
Q ss_pred -chhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 616 -RLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 616 -~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
... ............+++.+++..+|..|.+.+++..
T Consensus 248 ~~~~--------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 248 GRFT--------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccc--------cCccccCChhhhhcccccccCCchhccccccccc
Confidence 000 1111223345667889999999999999888754
No 436
>PF08488 WAK: Wall-associated kinase; InterPro: IPR013695 This domain is found together with the eukaryotic protein kinase domain IPR000719 from INTERPRO in plant wall-associated kinases (WAKs) and related proteins. WAKs are serine-threonine kinases which might be involved in signalling to the cytoplasm and are required for cell expansion []. ; GO: 0004674 protein serine/threonine kinase activity, 0016021 integral to membrane
Probab=99.44 E-value=2e-13 Score=116.08 Aligned_cols=98 Identities=20% Similarity=0.488 Sum_probs=69.1
Q ss_pred CCCccCcccc--CCCCC-Ccccceeeeeccc-cCCCCCcceEEEEeecceecccccccccccCCCccceEEEEEeccCcc
Q 005355 143 SRGCYDFVCA--LPPNL-TQDFNASMLYHFS-QSIPQKCQSVLMVEENWLQSEFLTNANVLRDHQQFPAVLEFAEDRGNC 218 (700)
Q Consensus 143 ~~~C~g~gCc--~~~~~-~~~~~~~~~~~~~-~~~~~~c~~a~~~e~~~~~~~~~~~~~~~~~~~~~p~vLdWai~~~~C 218 (700)
+++|+|.+|| .||.+ ++.+++++..... .....+|.+|||||+.||.++ .+++......+.+||||||+|...+.
T Consensus 1 n~~CsG~~CCQt~iP~~~~qv~~~~i~~~~~~~~~~~~Ck~AFL~d~~~~~~n-~t~p~~~~~~~y~pv~L~W~i~t~~~ 79 (103)
T PF08488_consen 1 NSSCSGIGCCQTSIPSGLLQVFNVTIESTDGNNQTSNGCKVAFLVDEDWFSSN-ITDPEDFHAMGYVPVVLDWFIDTSDS 79 (103)
T ss_pred CCccCCcceeccCCCCCCceEEEEEeEecCCCcccCCCceEEEEecccccccc-CCChHHhccCCeeEEEEEEEEecCCc
Confidence 3579999999 67764 5778888774333 222379999999999999765 55556666778899999999975443
Q ss_pred ccccccccccccCCcccccCCCceeeecc
Q 005355 219 VEEYNSRTTCNKDNRCSIQLTSGYSCLCH 247 (700)
Q Consensus 219 ~~~~~~~~~C~s~s~c~~~~~~gy~C~C~ 247 (700)
. ....++|..... . ....+|.|+
T Consensus 80 ~--~~~s~~C~~~~~-y---~~~~~C~C~ 102 (103)
T PF08488_consen 80 S--FSNSLACKNNTE-Y---SSSNRCSCS 102 (103)
T ss_pred C--cCcCccCCCcee-c---cCCCcEeCC
Confidence 2 233478877744 2 122388886
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.40 E-value=2.5e-12 Score=140.49 Aligned_cols=140 Identities=20% Similarity=0.196 Sum_probs=100.8
Q ss_pred ceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhH----------------------------------------HHHHH
Q 005355 396 RILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNI----------------------------------------EQFIN 435 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~ 435 (700)
+.||.|++|.||+|++++|+.||||+.+....... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 67999999999999999999999998754321110 12455
Q ss_pred HHHHHhhcC----CCceeeEEeEE-EeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHH-HHHHHHhcC
Q 005355 436 EVAILSQIN----HRNVVKLLGCC-LETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD-ALCYLHSAA 509 (700)
Q Consensus 436 E~~~l~~l~----h~niv~l~~~~-~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~-aL~~LH~~~ 509 (700)
|++.+.+++ |.+-+.+-..+ ......+|||||+++++|.++....... . .+..++.+++. .+..+|..|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~--~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG--L---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC--C---CHHHHHHHHHHHHHHHHHhCC
Confidence 666666552 33323322222 2244579999999999999887543211 2 23456666666 478899999
Q ss_pred CCCeeecCCCCCcEEECCCCcEEEeecCCCcccc
Q 005355 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVM 543 (700)
Q Consensus 510 ~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~ 543 (700)
++|+|++|.||++++++++++.|||++..+.
T Consensus 278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999997654
No 438
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.39 E-value=2.4e-13 Score=134.35 Aligned_cols=202 Identities=20% Similarity=0.287 Sum_probs=141.2
Q ss_pred HHhhcCCCceeeEEeEEEeCC-----cceEEEeeCCCCCHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 005355 439 ILSQINHRNVVKLLGCCLETE-----VPLLVYEFIPNGTLYQYIHDQTE-EFPITWEIRLRIAIEVSDALCYLHSAASIP 512 (700)
Q Consensus 439 ~l~~l~h~niv~l~~~~~~~~-----~~~lv~E~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ 512 (700)
-|-++-|.|||++..++.+.. ...++.|||..|+|..+|++... +..+......+|+.||+.||.|||+.. |+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-PP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-Cc
Confidence 345567999999998876543 45789999999999999987643 345888889999999999999999987 66
Q ss_pred eeecCCCCCcEEECCCCcEEEeecCCCcccccC----CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHh
Q 005355 513 IYHRDIKSANILLDDKYRAKVSDFGASRSVMID----QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLT 588 (700)
Q Consensus 513 ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~ellt 588 (700)
|+|+++..+.|++..++-+|+.--.-.. .... .........+-++|.+||.=.....+.++|||+||...+||..
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 9999999999999999999885321111 1100 0111122336789999998887888889999999999999988
Q ss_pred CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 589 GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 589 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
+..--..... ....+.... +.+. .+. -..-+.++.+|++..|..||+|++++..
T Consensus 278 lEiq~tnseS---~~~~ee~ia----~~i~-~le-----------n~lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 278 LEIQSTNSES---KVEVEENIA----NVII-GLE-----------NGLQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred heeccCCCcc---eeehhhhhh----hhee-ecc-----------CccccCcCcccccCCCCCCcchhhhhcC
Confidence 7643211111 000000000 0000 000 0112347999999999999999998764
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=8.8e-13 Score=141.71 Aligned_cols=249 Identities=21% Similarity=0.248 Sum_probs=183.8
Q ss_pred hcCCCccceEee--eCCeEEEEEEE--c-CCcEEEEEEccccC--hhhHHHHHHHHHHHhhc-CCCceeeEEeEEEeCCc
Q 005355 389 TDNFNTNRILGQ--GGQGTVYKGML--T-NGRIVAIKKSKLVD--ESNIEQFINEVAILSQI-NHRNVVKLLGCCLETEV 460 (700)
Q Consensus 389 ~~~~~~~~~lG~--G~fg~Vy~~~~--~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 460 (700)
...|...+.+|. |.+|.||.+.. . ++..+|+|+-+... +.....=.+|+...+.+ .|+|.++....+...+.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 456677788999 99999999987 3 57889999855422 23333334566666666 49999999999999999
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCcEEECCC-CcEEEee
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSD----ALCYLHSAASIPIYHRDIKSANILLDDK-YRAKVSD 535 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~----aL~~LH~~~~~~ivH~Dik~~NILl~~~-~~~kl~D 535 (700)
.++-+|++ +.+|.++.+.... .++...++....+... ||.++|+.. ++|-|+||.||++..+ ...+++|
T Consensus 193 lfiqtE~~-~~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 193 LFIQTELC-GESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred ceeeeccc-cchhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCC
Confidence 99999988 4788888776533 2677778888888888 999999999 9999999999999999 8899999
Q ss_pred cCCCcccccCCce----eeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCCCCCchhhhhHHHHHHHH
Q 005355 536 FGASRSVMIDQTH----LTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRSTDSEEDKSLVGYFLEA 611 (700)
Q Consensus 536 fGl~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 611 (700)
||+...+....-. ......+...|++||..+ ..++.++|+|++|.++.+-..+..+........
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~----------- 334 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS----------- 334 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCC-----------
Confidence 9999877644321 122235778899999886 567889999999999999988776654321111
Q ss_pred HHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 005355 612 MKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAF 660 (700)
Q Consensus 612 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~ 660 (700)
|.++-...+..++.......+..++..|+..+|..|++.+++..
T Consensus 335 -----W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 335 -----WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -----ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111111222333333445666899999999999999888766
No 440
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.30 E-value=3.9e-11 Score=130.16 Aligned_cols=166 Identities=17% Similarity=0.201 Sum_probs=129.9
Q ss_pred cCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHH
Q 005355 412 TNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIR 491 (700)
Q Consensus 412 ~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~ 491 (700)
.++.+|.|...+..+....+...+-++.|+.++||||+++++........|||+|-+ ..|..++.. +.....
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~------l~~~~v 106 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE------LGKEEV 106 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH------hHHHHH
Confidence 368888888887766655667788899999999999999999999999999999988 467777765 345667
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeeeecccccccccccccCCCC
Q 005355 492 LRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFT 571 (700)
Q Consensus 492 ~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 571 (700)
..-+.||+.||.|||+.+. ++|++|....|+++..|..||++|.++........ ......--..|..|+.+....
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc--
Confidence 7788999999999986653 99999999999999999999999988754321111 111111223566777665433
Q ss_pred cccceehHHHHHHHHHhCC
Q 005355 572 EKSDVYSFGVVLVELLTGQ 590 (700)
Q Consensus 572 ~ksDVwSlG~il~elltg~ 590 (700)
-..|.|.||++++|++.|.
T Consensus 182 ~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cchhhhhHHHHHHHHhCcc
Confidence 4569999999999999993
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=3.5e-11 Score=114.61 Aligned_cols=130 Identities=20% Similarity=0.146 Sum_probs=96.9
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCcee-eEEeEEEeCCcceEEEeeCCCCCH
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVV-KLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
.+.|+.|.++.||+++.. ++.|++|....... ....+..|+.+++.+.+.+++ +++... ....++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 357889999999999876 78899998764332 223567899999988655543 455443 3345899999999887
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 474 YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA--SIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 474 ~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~--~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.+.. . ....++.+++++|+.||+.+ ...++|+|++|.||+++ ++.++++||+.+.
T Consensus 79 ~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 6430 1 11245679999999999987 22359999999999999 5689999999875
No 442
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.20 E-value=9.6e-11 Score=129.45 Aligned_cols=147 Identities=16% Similarity=0.133 Sum_probs=96.9
Q ss_pred HHhcCCCccceEeeeCCeEEEEEEEcC-CcEEEEEEccccChh----------------------------------hHH
Q 005355 387 MATDNFNTNRILGQGGQGTVYKGMLTN-GRIVAIKKSKLVDES----------------------------------NIE 431 (700)
Q Consensus 387 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~ 431 (700)
.....|+. +.||.|++|.||+|++++ |+.||||+....-.. ..+
T Consensus 117 ~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~ 195 (537)
T PRK04750 117 EWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK 195 (537)
T ss_pred HHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence 33456776 789999999999999987 999999987642110 011
Q ss_pred ------HHHHHHHHHhhcC----CCceeeEEeEEEe-CCcceEEEeeCCCCCHHHHH--hccCC-CCCCCHHHHHHHHHH
Q 005355 432 ------QFINEVAILSQIN----HRNVVKLLGCCLE-TEVPLLVYEFIPNGTLYQYI--HDQTE-EFPITWEIRLRIAIE 497 (700)
Q Consensus 432 ------~~~~E~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~E~~~~gsL~~~l--~~~~~-~~~l~~~~~~~i~~q 497 (700)
+|.+|+..+.+++ +.+.+.+=.++.+ ....+|||||++|++|.++. ..... ...+....+..++.|
T Consensus 196 ~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 196 TLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred HHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 2344555555542 3433433333332 45668999999999998753 22210 001222333333333
Q ss_pred HHHHHHHHHhcCCCCeeecCCCCCcEEECCCC----cEEEeecCCCccccc
Q 005355 498 VSDALCYLHSAASIPIYHRDIKSANILLDDKY----RAKVSDFGASRSVMI 544 (700)
Q Consensus 498 i~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~----~~kl~DfGl~~~~~~ 544 (700)
++..| ++|+|+||.||+++.++ ++++.|||++..+..
T Consensus 276 -------if~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 276 -------VFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -------HHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 34577 99999999999999888 999999999987643
No 443
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.16 E-value=6.7e-10 Score=106.75 Aligned_cols=135 Identities=18% Similarity=0.147 Sum_probs=98.5
Q ss_pred ceEeeeCCeEEEEEEEcC-------CcEEEEEEcccc-------------C---------hhhHHHHH----HHHHHHhh
Q 005355 396 RILGQGGQGTVYKGMLTN-------GRIVAIKKSKLV-------------D---------ESNIEQFI----NEVAILSQ 442 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~-------------~---------~~~~~~~~----~E~~~l~~ 442 (700)
..||.|--+.||.|...+ +..+|||+.+.. + ....+.+. +|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 478999964321 0 11123333 79999999
Q ss_pred cCC--CceeeEEeEEEeCCcceEEEeeCCCCCHHH-HHhccCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCC
Q 005355 443 INH--RNVVKLLGCCLETEVPLLVYEFIPNGTLYQ-YIHDQTEEFPITWEIRLRIAIEVSDALCYL-HSAASIPIYHRDI 518 (700)
Q Consensus 443 l~h--~niv~l~~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~~~~ivH~Di 518 (700)
+.. -++.+++++ ...+|||||+.+..+.. .+++. .++.+....+..+++.+|..| |+.+ |+|+||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKECN---LVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 853 466666654 45689999997654322 22221 255566778889999999999 7888 999999
Q ss_pred CCCcEEECCCCcEEEeecCCCccc
Q 005355 519 KSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 519 k~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
++.|||+++ +.+.|+|||.+...
T Consensus 152 s~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 152 SEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred CHHHEEEEC-CcEEEEECCCceeC
Confidence 999999974 58999999988754
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.14 E-value=8.8e-10 Score=115.98 Aligned_cols=168 Identities=23% Similarity=0.349 Sum_probs=129.0
Q ss_pred eEEEEEEEc-CCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEE----eCCcceEEEeeCCC-CCHHHHH
Q 005355 404 GTVYKGMLT-NGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCL----ETEVPLLVYEFIPN-GTLYQYI 477 (700)
Q Consensus 404 g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~lv~E~~~~-gsL~~~l 477 (700)
.+.|++... +|..+++|+++............-+++++++.|.|+|++.+++. .+...++||+|.++ ++|.++-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 578998854 89999999995433333334455678899999999999999987 33466899999985 5787775
Q ss_pred hccC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccC
Q 005355 478 HDQT------------EEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMID 545 (700)
Q Consensus 478 ~~~~------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~ 545 (700)
.... .+...++..+|.++.|+..||.++|+.| +.-+-|.+++||++.+.+++|+..|....+..+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 4321 1234788999999999999999999999 888999999999999999999999887665443
Q ss_pred CceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCCCC
Q 005355 546 QTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKP 592 (700)
Q Consensus 546 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p 592 (700)
.. |-+.. -.+-|.=.||.+++.|.+|..-
T Consensus 447 ~~---------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 447 PT---------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CC---------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 31 11111 1256888899999999998543
No 445
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=1.4e-10 Score=124.86 Aligned_cols=257 Identities=19% Similarity=0.225 Sum_probs=180.9
Q ss_pred ccchHH-HHHHhcCCCccceEeeeCCeEEEEEEEc--CCcEEEEEEccccChhhHHH--HHHHHHHHhhc-CCCceeeEE
Q 005355 379 LFTSME-LEMATDNFNTNRILGQGGQGTVYKGMLT--NGRIVAIKKSKLVDESNIEQ--FINEVAILSQI-NHRNVVKLL 452 (700)
Q Consensus 379 ~~~~~e-~~~~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~ 452 (700)
++...+ ......+|..+..||.|.|+.|+....+ ++..+++|.+...-.....+ -..|+.+...+ .|.++++.+
T Consensus 253 i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~ 332 (524)
T KOG0601|consen 253 IFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN 332 (524)
T ss_pred eecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC
Confidence 333334 4445678999999999999999987744 57789999765433322222 24566666655 589999988
Q ss_pred eEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC-CcE
Q 005355 453 GCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK-YRA 531 (700)
Q Consensus 453 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~-~~~ 531 (700)
..+......++--||++++++...+.-. ..+.+..++++..|++.++.++|+.. ++|+|+||+||++..+ +..
T Consensus 333 ~~W~~~r~~~ip~e~~~~~s~~l~~~~~---~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 333 SSWSQLRQGYIPLEFCEGGSSSLRSVTS---QMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred CCccccccccCchhhhcCcchhhhhHHH---HhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhh
Confidence 8888888888999999999887776322 23788889999999999999999988 9999999999999876 788
Q ss_pred EEeecCCCcccccCCceeeeeeecccccc--cccccccCCCCcccceehHHHHHHHHHhCCCCCCC-CCchhhhhHHHHH
Q 005355 532 KVSDFGASRSVMIDQTHLTTRVQGTFGYL--DPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIRS-TDSEEDKSLVGYF 608 (700)
Q Consensus 532 kl~DfGl~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~~-~~~~~~~~~~~~~ 608 (700)
++.|||....+.... . .....-+++ +++......+-.+.|++|||.-+.+.+++..--.. ....
T Consensus 407 ~~~~~~~~t~~~~~~---~-~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~--------- 473 (524)
T KOG0601|consen 407 KLGDFGCWTRLAFSS---G-VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL--------- 473 (524)
T ss_pred hccccccccccceec---c-cccccccccccchhhccccccccccccccccccccccccCcccCcccccce---------
Confidence 999999886421111 1 111223344 56666667888999999999999999998643211 1100
Q ss_pred HHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhch
Q 005355 609 LEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFELGGIR 666 (700)
Q Consensus 609 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~L~~l~ 666 (700)
.+..+. . ... ......+..+.+.++..++..||.+.++..+.+-.+
T Consensus 474 --~i~~~~--------~-p~~-~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 474 --TIRSGD--------T-PNL-PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred --eeeccc--------c-cCC-CchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 011111 1 111 112256777889999999999999998887665543
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.04 E-value=1.4e-09 Score=108.24 Aligned_cols=142 Identities=21% Similarity=0.263 Sum_probs=109.7
Q ss_pred ceEeeeCCeEEEEEEEcCCcEEEEEEccccCh-hhHHHHHHHHHHHhhcCC--CceeeEEeEEEeCC---cceEEEeeCC
Q 005355 396 RILGQGGQGTVYKGMLTNGRIVAIKKSKLVDE-SNIEQFINEVAILSQINH--RNVVKLLGCCLETE---VPLLVYEFIP 469 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~---~~~lv~E~~~ 469 (700)
+.|+.|..+.||++...+|+.+++|....... .....+..|+++++.+++ .++.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999987678999998765332 134678899999999975 34577777766542 5689999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 005355 470 NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAA---------------------------------------- 509 (700)
Q Consensus 470 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---------------------------------------- 509 (700)
+.+|.+.+.. ..++...+..++.+++++|..||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888776532 12677778888888888888888521
Q ss_pred -------------CCCeeecCCCCCcEEECC--CCcEEEeecCCCcc
Q 005355 510 -------------SIPIYHRDIKSANILLDD--KYRAKVSDFGASRS 541 (700)
Q Consensus 510 -------------~~~ivH~Dik~~NILl~~--~~~~kl~DfGl~~~ 541 (700)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 134799999999999998 66789999998753
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=1.7e-09 Score=100.18 Aligned_cols=131 Identities=23% Similarity=0.304 Sum_probs=101.5
Q ss_pred ceEeeeCCeEEEEEEEcCCcEEEEEE-ccc-c-C-----hhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEee
Q 005355 396 RILGQGGQGTVYKGMLTNGRIVAIKK-SKL-V-D-----ESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~~vavK~-~~~-~-~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 467 (700)
..+.+|+-+.+|.+.+. |..+++|. ... . . .-..+.-.+|+.++.+++--.|...+=+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999875 44566773 211 1 1 11234567899999998766666555566777888999999
Q ss_pred CCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 468 IPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 468 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
+++..|.+++... ...++..+=..+.-||..+ |+|+||.++||++.... +.++||||+..
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999998765 2457777888889999999 99999999999998874 99999999963
No 448
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.00 E-value=6.2e-09 Score=95.93 Aligned_cols=143 Identities=22% Similarity=0.264 Sum_probs=107.6
Q ss_pred ccceEeeeCCeEEEEEEEcCCcEEEEEEcc-c-------cChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEE
Q 005355 394 TNRILGQGGQGTVYKGMLTNGRIVAIKKSK-L-------VDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 394 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~-~-------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 465 (700)
.+.+|-||+-+.|+++.+. |+...||.-. . ...-...+..+|+++|.+++--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 5678999999999999986 7777777421 1 11122456788999999986555555555566777778999
Q ss_pred eeCCC-CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC---CcEEEeecCCCcc
Q 005355 466 EFIPN-GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK---YRAKVSDFGASRS 541 (700)
Q Consensus 466 E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~---~~~kl~DfGl~~~ 541 (700)
||+++ .++.+++....... ........++.+|=+.+.-||..+ |+|+||..+||+|..+ ..+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 48889887654432 333344788999999999999999 9999999999999543 3458999999863
No 449
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.98 E-value=8.4e-11 Score=132.74 Aligned_cols=252 Identities=23% Similarity=0.274 Sum_probs=177.9
Q ss_pred HHHHhcCCCccceEeeeCCeEEEEEEEc-CCcEEEEEEcccc---ChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCc
Q 005355 385 LEMATDNFNTNRILGQGGQGTVYKGMLT-NGRIVAIKKSKLV---DESNIEQFINEVAILSQINHRNVVKLLGCCLETEV 460 (700)
Q Consensus 385 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 460 (700)
.....+.+.+.+-+-.|.++.++.+.-. .+...++|..... ...+.+..+.+-.++-..++|-++....-+.-...
T Consensus 799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP 878 (1205)
T KOG0606|consen 799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSP 878 (1205)
T ss_pred ccCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCC
Confidence 3455677888888999999999987744 3444444433221 12222333444444444456667666655666777
Q ss_pred ceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 461 PLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 461 ~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
..|+++|..+++|...|+... ..+.+........+..++++||... +.|+|++|.|+|+..++..+++||+...
T Consensus 879 ~~L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred cchhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccc
Confidence 899999999999999998765 2556666677788899999999987 8999999999999999999999998333
Q ss_pred cccc---------------------CC---------ceeeeeeecccccccccccccCCCCcccceehHHHHHHHHHhCC
Q 005355 541 SVMI---------------------DQ---------THLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQ 590 (700)
Q Consensus 541 ~~~~---------------------~~---------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~ 590 (700)
.... .. ........+|+.|.+||...+......+|+|++|++++|.++|.
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~ 1032 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGI 1032 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCC
Confidence 2110 00 00122345899999999999999999999999999999999999
Q ss_pred CCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHH
Q 005355 591 KPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMK 656 (700)
Q Consensus 591 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~ 656 (700)
.||........ .+.+..+... ....+.+...+..+++.+.+..+|.+|..+.
T Consensus 1033 pp~na~tpq~~-------f~ni~~~~~~-------~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1033 PPFNAETPQQI-------FENILNRDIP-------WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCcchhhh-------hhccccCCCC-------CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 99986654432 1111111110 1122345566788899999999999998876
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.89 E-value=1.2e-08 Score=104.81 Aligned_cols=273 Identities=17% Similarity=0.173 Sum_probs=169.2
Q ss_pred CccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhh-cCCCceeeEEeEE-------EeCCcceEE
Q 005355 393 NTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQ-INHRNVVKLLGCC-------LETEVPLLV 464 (700)
Q Consensus 393 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~-------~~~~~~~lv 464 (700)
...+.||+|+.+.+|-.--- +.. +.|+...-......+.. +.|.. -.||-+-.=+.+- ......-++
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa~~aqk~---a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPAAQAQKV---AELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCCccccCCccceeeecchh-hch-hheeecCCCchHHHHHH---HHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 44678999999999864311 122 34555443333322222 22322 2455433311111 111224567
Q ss_pred EeeCCCC-CHHHHHhccCCC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 465 YEFIPNG-TLYQYIHDQTEE---FPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 465 ~E~~~~g-sL~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
|..+++. .+..++.-..++ ....|..+++.++.++.+.+.||..| .+-+|++++|+|+++++.+.|.|-..-.
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEccccee
Confidence 7766553 233333322111 23689999999999999999999999 8999999999999999999999854332
Q ss_pred ccccCCceeeeeeecccccccccccc-----cCCCCcccceehHHHHHHHHHhC-CCCCCCCCchhhh-hHHHHHHHHHH
Q 005355 541 SVMIDQTHLTTRVQGTFGYLDPEYFR-----SSQFTEKSDVYSFGVVLVELLTG-QKPIRSTDSEEDK-SLVGYFLEAMK 613 (700)
Q Consensus 541 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDVwSlG~il~elltg-~~p~~~~~~~~~~-~~~~~~~~~~~ 613 (700)
.. .........+|...|++||... +..-+...|.|.||+++++|+.| +.||.+....... ... ...+.
T Consensus 166 i~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~---E~~Ia 240 (637)
T COG4248 166 IN--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPL---ETDIA 240 (637)
T ss_pred ec--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcc---hhhhh
Confidence 21 3333444566889999999754 34567789999999999999986 9999765421110 000 01111
Q ss_pred hcchhhhcchhh-----hhccC-HHHHHHHHHHHHHHhccC--CCCCCCHHHHHHHHHhchhhcCCCccCCCC
Q 005355 614 ENRLFEVLDARV-----LKEAK-EEEIITVAMLAKRCLNMI--GKKRPTMKEAAFELGGIRASIGDSIMQHNC 678 (700)
Q Consensus 614 ~~~~~~~~d~~~-----~~~~~-~~~~~~l~~li~~cl~~~--p~~RPs~~evl~~L~~l~~~~~~~~~~~~~ 678 (700)
.+.+...-+.+. ..+.+ .-.++.+..|..+|+..- +.-|||++.++..|..++.++.++.....+
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a~H 313 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSAMH 313 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhcccc
Confidence 122211111110 11111 223456777888888653 568999999999999999999988876554
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.88 E-value=1.8e-08 Score=96.61 Aligned_cols=125 Identities=25% Similarity=0.274 Sum_probs=83.3
Q ss_pred EEEEEEEcCCcEEEEEEccccCh--------------------------hhHHHHHHHHHHHhhcCCC--ceeeEEeEEE
Q 005355 405 TVYKGMLTNGRIVAIKKSKLVDE--------------------------SNIEQFINEVAILSQINHR--NVVKLLGCCL 456 (700)
Q Consensus 405 ~Vy~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 456 (700)
.||.|...++..+|||+.+.... .......+|.+.|.++... ++.+++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999988899999996443100 1133467899999999765 566666442
Q ss_pred eCCcceEEEeeCC--CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCCeeecCCCCCcEEECCCCcEEE
Q 005355 457 ETEVPLLVYEFIP--NGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY-LHSAASIPIYHRDIKSANILLDDKYRAKV 533 (700)
Q Consensus 457 ~~~~~~lv~E~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~-LH~~~~~~ivH~Dik~~NILl~~~~~~kl 533 (700)
...|||||++ +..+..+.... ++.+....++.+++..+.. +|..| |+|+||.+.|||++++ .+.|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEE
Confidence 4489999998 55554443322 2233456677788886665 57888 9999999999999988 9999
Q ss_pred eecCCCccc
Q 005355 534 SDFGASRSV 542 (700)
Q Consensus 534 ~DfGl~~~~ 542 (700)
+|||.+...
T Consensus 148 IDf~qav~~ 156 (188)
T PF01163_consen 148 IDFGQAVDS 156 (188)
T ss_dssp --GTTEEET
T ss_pred EecCcceec
Confidence 999988654
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.83 E-value=7.4e-08 Score=97.99 Aligned_cols=139 Identities=15% Similarity=0.140 Sum_probs=98.8
Q ss_pred eEeeeCCeEEEEEEEcCCcEEEEEEccccChh-----------hHHHHHHHHHHHhhcCCCc--eeeEEeEEEe-----C
Q 005355 397 ILGQGGQGTVYKGMLTNGRIVAIKKSKLVDES-----------NIEQFINEVAILSQINHRN--VVKLLGCCLE-----T 458 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~-----~ 458 (700)
.+-.-....|++..+ +|+.+.||+....... ....+.+|...+.++...+ .+.++++... .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 333333344667666 4788999976432211 1124778999888874333 3344545433 2
Q ss_pred CcceEEEeeCCCC-CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC-------CCc
Q 005355 459 EVPLLVYEFIPNG-TLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD-------KYR 530 (700)
Q Consensus 459 ~~~~lv~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~-------~~~ 530 (700)
...+||+|++++. +|.+++..... .+.+......++.+++..+.-||..| |+|+|+++.|||++. +..
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCce
Confidence 3468999999886 89999864321 23566777899999999999999999 999999999999975 578
Q ss_pred EEEeecCCCc
Q 005355 531 AKVSDFGASR 540 (700)
Q Consensus 531 ~kl~DfGl~~ 540 (700)
+.|+||+.+.
T Consensus 184 ~~LIDl~r~~ 193 (268)
T PRK15123 184 LSVIDLHRAQ 193 (268)
T ss_pred EEEEECCccc
Confidence 9999999885
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.58 E-value=3.4e-07 Score=90.13 Aligned_cols=134 Identities=22% Similarity=0.220 Sum_probs=97.3
Q ss_pred CCccceEeeeCCeEEEEEEEcCCcEEEEEEccccC----------------------hhhHHHHHHHHHHHhhcCCC--c
Q 005355 392 FNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVD----------------------ESNIEQFINEVAILSQINHR--N 447 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~E~~~l~~l~h~--n 447 (700)
..+..+||-|--+.||.|....|.++|||.-+... ...+....+|.++|.+|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45678999999999999999999999999432210 01234467899999998654 6
Q ss_pred eeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC
Q 005355 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD 527 (700)
Q Consensus 448 iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~ 527 (700)
+.+.+++ +...+|||++++..|...- ++.+....++..|++-+.-+-..| |||+|+++-|||+++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEec
Confidence 6666653 4557999999886665433 122233344555555555555778 999999999999999
Q ss_pred CCcEEEeecCCCc
Q 005355 528 KYRAKVSDFGASR 540 (700)
Q Consensus 528 ~~~~kl~DfGl~~ 540 (700)
+|.+.++||--+.
T Consensus 238 dg~~~vIDwPQ~v 250 (304)
T COG0478 238 DGDIVVIDWPQAV 250 (304)
T ss_pred CCCEEEEeCcccc
Confidence 9999999996554
No 454
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.56 E-value=2.1e-08 Score=109.79 Aligned_cols=151 Identities=22% Similarity=0.234 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCcee--------eeeeecccccccccccc
Q 005355 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHL--------TTRVQGTFGYLDPEYFR 566 (700)
Q Consensus 495 ~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~--------~~~~~gt~~y~aPE~~~ 566 (700)
+.+++.||.|||...+ +||++|.|++|.++.++..||..|+.+.......... ..-.+....|.|||++.
T Consensus 105 l~~v~dgl~flh~sAk--~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAK--VVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCcc--eeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3456699999998764 9999999999999999999999999876543321111 11133566899999999
Q ss_pred cCCCCcccceehHHHHHHHHHh-CCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHh
Q 005355 567 SSQFTEKSDVYSFGVVLVELLT-GQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCL 645 (700)
Q Consensus 567 ~~~~s~ksDVwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl 645 (700)
....+.++|+||+|++++-+.. |+.-+........... ....+..-......+.+.++.+=+.+++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~-------------~~~~~~~~~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF-------------SRNLLNAGAFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhh-------------hhcccccccccccccCcHHHHHHHHHHh
Confidence 9899999999999999999995 4444433321111000 0011111111223456677888899999
Q ss_pred ccCCCCCCCHHHHHH
Q 005355 646 NMIGKKRPTMKEAAF 660 (700)
Q Consensus 646 ~~~p~~RPs~~evl~ 660 (700)
..++.-||++.++..
T Consensus 250 ~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLS 264 (700)
T ss_pred cCCcccCcchhhhhc
Confidence 999999998877665
No 455
>PRK09902 hypothetical protein; Provisional
Probab=98.53 E-value=2.1e-06 Score=82.77 Aligned_cols=139 Identities=19% Similarity=0.144 Sum_probs=103.1
Q ss_pred EeeeCCeEEEEEEEcCCcEEEEEEccc------cChhhHHHHHHHHHHHhhcCC--CceeeEEeEEEeC----CcceEEE
Q 005355 398 LGQGGQGTVYKGMLTNGRIVAIKKSKL------VDESNIEQFINEVAILSQINH--RNVVKLLGCCLET----EVPLLVY 465 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~~~~~vavK~~~~------~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~----~~~~lv~ 465 (700)
-|+||-+-|++.... |+.+-+|+... .-+.....|.+|+..|.++.. -.+.+++..-... -..+||+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 366888999997775 55788997542 113356789999999999853 2355555222221 2347999
Q ss_pred eeCCC-CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCc--EEEeecCCCcc
Q 005355 466 EFIPN-GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYR--AKVSDFGASRS 541 (700)
Q Consensus 466 E~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~--~kl~DfGl~~~ 541 (700)
|-+++ -+|.+++...... +.+...+..++.++++.++-||+.+ +.|+|+.+.|||++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~-~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVS-PYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcC-CcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97754 5899988664321 3677888899999999999999999 999999999999986666 99999987654
No 456
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.51 E-value=1.1e-06 Score=86.42 Aligned_cols=106 Identities=20% Similarity=0.249 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhhcC--CCceeeEEeEEEeCC----cceEEEeeCCCC-CHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 005355 430 IEQFINEVAILSQIN--HRNVVKLLGCCLETE----VPLLVYEFIPNG-TLYQYIHDQTEEFPITWEIRLRIAIEVSDAL 502 (700)
Q Consensus 430 ~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~----~~~lv~E~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL 502 (700)
.....+|...+..+. .-.+.+.+++..... ..+||+|++++. +|.+++..... ++......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence 346778888887774 333455566655432 347999999874 89999986433 56667788999999999
Q ss_pred HHHHhcCCCCeeecCCCCCcEEECCCC---cEEEeecCCCcc
Q 005355 503 CYLHSAASIPIYHRDIKSANILLDDKY---RAKVSDFGASRS 541 (700)
Q Consensus 503 ~~LH~~~~~~ivH~Dik~~NILl~~~~---~~kl~DfGl~~~ 541 (700)
+-||..| |+|+|+++.|||++.+. .+.++||+.++.
T Consensus 132 ~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 132 AKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999 99999999999998887 899999997764
No 457
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.40 E-value=1.5e-06 Score=95.87 Aligned_cols=147 Identities=19% Similarity=0.169 Sum_probs=97.1
Q ss_pred hcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChh----------------------------------------
Q 005355 389 TDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDES---------------------------------------- 428 (700)
Q Consensus 389 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~---------------------------------------- 428 (700)
...|.. +.|+.++-|.||+|++++|+.||||+....-..
T Consensus 125 F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~ 203 (517)
T COG0661 125 FSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLR 203 (517)
T ss_pred HHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHH
Confidence 344443 679999999999999999999999976542110
Q ss_pred hHHHHHHHHHHHhhcC-----CCceeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHH-H
Q 005355 429 NIEQFINEVAILSQIN-----HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDA-L 502 (700)
Q Consensus 429 ~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~a-L 502 (700)
..-++.+|+..+.+++ .+++.-..=+..-....+|+|||++|..+.+........ ++.+. ++..++++ +
T Consensus 204 ~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g--~d~k~---ia~~~~~~f~ 278 (517)
T COG0661 204 EELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG--IDRKE---LAELLVRAFL 278 (517)
T ss_pred HHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC--CCHHH---HHHHHHHHHH
Confidence 0112445666655542 333332222233356679999999999999985433222 44333 33333332 2
Q ss_pred HHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCccccc
Q 005355 503 CYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMI 544 (700)
Q Consensus 503 ~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~ 544 (700)
..+-..| ++|.|..|.||+++.++++-+.|||+...+..
T Consensus 279 ~q~~~dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 279 RQLLRDG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHhcC---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 2333356 99999999999999999999999999987643
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.27 E-value=8.2e-06 Score=79.05 Aligned_cols=139 Identities=17% Similarity=0.228 Sum_probs=92.9
Q ss_pred HHHhcCCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHH---------HHHHHHHhhcCC---CceeeEEe
Q 005355 386 EMATDNFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQF---------INEVAILSQINH---RNVVKLLG 453 (700)
Q Consensus 386 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~---------~~E~~~l~~l~h---~niv~l~~ 453 (700)
.....+|...+++-......|.+-..+ ++.+.+|..........+.| .+++..+.+++. .....++.
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 455788888888888777777776664 78899997665433322222 223333333322 22222222
Q ss_pred E-----EEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCC
Q 005355 454 C-----CLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDK 528 (700)
Q Consensus 454 ~-----~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~ 528 (700)
+ +.-....+|+|||++|..|.++.. +++ .++..+++++.-||+.| ++|+|..|.|++++++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~ 171 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN 171 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC
Confidence 2 222344468999999988876642 332 35567788899999999 9999999999999966
Q ss_pred CcEEEeecCCCc
Q 005355 529 YRAKVSDFGASR 540 (700)
Q Consensus 529 ~~~kl~DfGl~~ 540 (700)
.+++.||+..+
T Consensus 172 -~i~iID~~~k~ 182 (229)
T PF06176_consen 172 -GIRIIDTQGKR 182 (229)
T ss_pred -cEEEEECcccc
Confidence 59999998665
No 459
>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]
Probab=98.24 E-value=1.3e-06 Score=103.99 Aligned_cols=79 Identities=24% Similarity=0.551 Sum_probs=66.1
Q ss_pred ccccCCcccccCCCceeeeccCCCcc---------ccCCcccccccccCCCCCcccCCCCCCccCCC-----CCCcccCC
Q 005355 227 TCNKDNRCSIQLTSGYSCLCHRSFNG---------LNDGYCVGDLLCDSASSPYNCSGCPNGYLLDD-----TDSCYQNT 292 (700)
Q Consensus 227 ~C~s~s~c~~~~~~gy~C~C~~Gy~G---------~~~~~~~~~~~c~~~~~py~c~~c~~~~~~~~-----~d~C~~~~ 292 (700)
-|...++|.....+||.|+|+.-|-| |....|.-.++|.-..|.|.|. |++++.++. .++|..+.
T Consensus 3871 pCqhgG~C~~~~~ggy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~Cn-C~~gyTG~~Ce~~Gi~eCs~n~ 3949 (4289)
T KOG1219|consen 3871 PCQHGGTCISQPKGGYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCN-CPNGYTGKRCEARGISECSKNV 3949 (4289)
T ss_pred cccCCCEecCCCCCceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEe-CCCCccCceeeccccccccccc
Confidence 45555778777788999999999999 7788898889999999999996 888876653 57899887
Q ss_pred CC--CCcCCCCCCCCC
Q 005355 293 TA--KTDTISPSPSPY 306 (700)
Q Consensus 293 ~~--~~~~~~p~~~~~ 306 (700)
|. +.|.+.++.+.|
T Consensus 3950 C~~gg~C~n~~gsf~C 3965 (4289)
T KOG1219|consen 3950 CGTGGQCINIPGSFHC 3965 (4289)
T ss_pred ccCCceeeccCCceEe
Confidence 74 679999998888
No 460
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.22 E-value=1.8e-05 Score=78.82 Aligned_cols=138 Identities=17% Similarity=0.190 Sum_probs=84.4
Q ss_pred ceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCc--eeeEEeEEEeCCcceEEEeeCCCCC-
Q 005355 396 RILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRN--VVKLLGCCLETEVPLLVYEFIPNGT- 472 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~E~~~~gs- 472 (700)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 57899999999983 25567888876422 2345788999999986433 4677777777777789999998863
Q ss_pred HHHHH---------------------hccCCCCCCCHHHHH-HHHH----------HHHH-HHHHHHhc-CCCCeeecCC
Q 005355 473 LYQYI---------------------HDQTEEFPITWEIRL-RIAI----------EVSD-ALCYLHSA-ASIPIYHRDI 518 (700)
Q Consensus 473 L~~~l---------------------~~~~~~~~l~~~~~~-~i~~----------qi~~-aL~~LH~~-~~~~ivH~Di 518 (700)
+...+ |..... ........ .+.. .+.+ ...+|... ..+.++|+|+
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~-~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCD-TSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCC-CCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 22111 111000 01111100 0000 0111 12222211 1234789999
Q ss_pred CCCcEEECCCCcEEEeecCCCc
Q 005355 519 KSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 519 k~~NILl~~~~~~kl~DfGl~~ 540 (700)
.|.||++++++ +.|+||+.+.
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcC
Confidence 99999999887 9999998774
No 461
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.10 E-value=5.4e-05 Score=74.17 Aligned_cols=151 Identities=21% Similarity=0.210 Sum_probs=99.7
Q ss_pred cchHHHHHHhcCCCccceEe---eeCCeEEEEEEEcCCcEEEEEEccccChhh------------------------HHH
Q 005355 380 FTSMELEMATDNFNTNRILG---QGGQGTVYKGMLTNGRIVAIKKSKLVDESN------------------------IEQ 432 (700)
Q Consensus 380 ~~~~e~~~~~~~~~~~~~lG---~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~------------------------~~~ 432 (700)
.+...+....++..+....| .|.-+.||+|...++..+|||+.+...... ...
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 34556666666666666555 555668999998889999999866532111 011
Q ss_pred HHHHHHHHhhcC--CCceeeEEeEEEeCCcceEEEeeCCCCC-HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHh-c
Q 005355 433 FINEVAILSQIN--HRNVVKLLGCCLETEVPLLVYEFIPNGT-LYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHS-A 508 (700)
Q Consensus 433 ~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~E~~~~gs-L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~ 508 (700)
...|...|+++. +-.+.+.+.+. .-.|||||+...- -.-.|.+ .++..+....+..++++.+.-|-. .
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~~~a 186 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLYKEA 186 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHHHhc
Confidence 235666676663 33344444333 3379999996531 1111111 123444677788889999888887 6
Q ss_pred CCCCeeecCCCCCcEEECCCCcEEEeecCCCccc
Q 005355 509 ASIPIYHRDIKSANILLDDKYRAKVSDFGASRSV 542 (700)
Q Consensus 509 ~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~ 542 (700)
+ +||+||+.-|||+. ++.+.|+||+-+...
T Consensus 187 ~---LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 187 G---LVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred C---cccccchhhheEEE-CCeEEEEECcccccc
Confidence 6 99999999999999 779999999988654
No 462
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.08 E-value=4.4e-05 Score=76.31 Aligned_cols=143 Identities=23% Similarity=0.260 Sum_probs=85.1
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC--ceeeEEeEEEeC---CcceEEEeeCC
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHR--NVVKLLGCCLET---EVPLLVYEFIP 469 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~E~~~ 469 (700)
++.|+.|..+.||+....+ ..+++|..... .....+.+|..+++.+... .+.+++...... ...+++|++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 4679999999999999876 69999986654 4557788899998888533 356677644332 34589999999
Q ss_pred CCCHHH----------------HH---hcc-CCCCCCCHHH---------HHHH------------HHHHHH-HHHHHHh
Q 005355 470 NGTLYQ----------------YI---HDQ-TEEFPITWEI---------RLRI------------AIEVSD-ALCYLHS 507 (700)
Q Consensus 470 ~gsL~~----------------~l---~~~-~~~~~l~~~~---------~~~i------------~~qi~~-aL~~LH~ 507 (700)
+.++.. .+ +.. .......... .... ...+.+ .++.+++
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 988877 11 111 0111111100 0000 111222 2333332
Q ss_pred ----cCCCCeeecCCCCCcEEEC-CCCcEEEeecCCCc
Q 005355 508 ----AASIPIYHRDIKSANILLD-DKYRAKVSDFGASR 540 (700)
Q Consensus 508 ----~~~~~ivH~Dik~~NILl~-~~~~~kl~DfGl~~ 540 (700)
.....++|+|+.+.|||++ +++.+-|+||+.+.
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 1334499999999999999 66677899998774
No 463
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.02 E-value=2.3e-05 Score=75.53 Aligned_cols=104 Identities=26% Similarity=0.370 Sum_probs=82.5
Q ss_pred HHHHHHHhhcCC-CceeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 005355 434 INEVAILSQINH-RNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIP 512 (700)
Q Consensus 434 ~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ 512 (700)
..|.-+++.+++ +++++++|.| ..+++.|+.+.+++...-.....-...+|..+.+||.++++.+.+|++...-.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC----GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC----CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 458888888876 6999999999 34789999987766532111011123789999999999999999999865445
Q ss_pred eeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 513 IYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 513 ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
+...|++++|+-+++++++|++|...+..
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcch
Confidence 99999999999999999999999987653
No 464
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.99 E-value=7.6e-05 Score=75.49 Aligned_cols=139 Identities=17% Similarity=0.147 Sum_probs=85.7
Q ss_pred EeeeCC-eEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcC-CCceeeEEeEEEeCCcceEEEeeCCCCCHHH
Q 005355 398 LGQGGQ-GTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGTLYQ 475 (700)
Q Consensus 398 lG~G~f-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~ 475 (700)
|-.|.. ..||+.... +..+.||+..... ...+.+|+++++.+. +--+.+++++....+..++|||+++|.+|..
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 444555 788998765 4788889876543 345678999988873 4456677877776667899999999887764
Q ss_pred HH-------------------hccCC-CCCCCH--HHHHHHHH--------------------HHHHHHHHHHh----cC
Q 005355 476 YI-------------------HDQTE-EFPITW--EIRLRIAI--------------------EVSDALCYLHS----AA 509 (700)
Q Consensus 476 ~l-------------------~~~~~-~~~l~~--~~~~~i~~--------------------qi~~aL~~LH~----~~ 509 (700)
.. +.... ..+... ...+.... .+...+..|-. ..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 161 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE 161 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence 42 11110 001110 00000000 01111222211 12
Q ss_pred CCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 510 SIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 510 ~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.+.++|+|+.|.|||++++..+.|+||+.+.
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 2458999999999999998778999998774
No 465
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.96 E-value=0.00018 Score=69.56 Aligned_cols=129 Identities=22% Similarity=0.280 Sum_probs=92.9
Q ss_pred ccceEeeeCCeEEEEEEEcCCcEEEEEEccccC----------------hhhHHHHHHHHHHHhhcC------CCceeeE
Q 005355 394 TNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVD----------------ESNIEQFINEVAILSQIN------HRNVVKL 451 (700)
Q Consensus 394 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv~l 451 (700)
....||+|+.=.||. +.+.....||+..... ....++..+|+.-...+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 346799999999986 4556677888776544 223456677777666655 8899999
Q ss_pred EeEEEeCCcceEEEeeCCC------CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEE
Q 005355 452 LGCCLETEVPLLVYEFIPN------GTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILL 525 (700)
Q Consensus 452 ~~~~~~~~~~~lv~E~~~~------gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl 525 (700)
+|....+..+-+|+|.+.+ .+|.+++.... ++. .... .+-+-..||-+++ |+.+|++|.||++
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~-~~~~---~L~~f~~~l~~~~---Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG----LTE-ELRQ---ALDEFKRYLLDHH---IVIRDLNPHNIVV 151 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC----ccH-HHHH---HHHHHHHHHHHcC---CeecCCCcccEEE
Confidence 9999999999999998764 37888885543 554 3333 3344456777777 9999999999999
Q ss_pred CCC---C-cEEEee
Q 005355 526 DDK---Y-RAKVSD 535 (700)
Q Consensus 526 ~~~---~-~~kl~D 535 (700)
..+ . .+.|+|
T Consensus 152 ~~~~~~~~~lvlID 165 (199)
T PF10707_consen 152 QRRDSGEFRLVLID 165 (199)
T ss_pred EecCCCceEEEEEe
Confidence 532 2 577776
No 466
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.96 E-value=5.3e-05 Score=70.18 Aligned_cols=129 Identities=21% Similarity=0.278 Sum_probs=90.1
Q ss_pred CCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCC
Q 005355 392 FNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g 471 (700)
.+..+.|++|++|.||++.+. +..+|+|+-.. +.....+..|+++|..+.-.++-+=+-.+-+ .++.|||+.+.
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~--ds~r~~l~kEakiLeil~g~~~~p~vy~yg~---~~i~me~i~G~ 97 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWR-GGEVALKVRRR--DSPRRNLEKEAKILEILAGEGVTPEVYFYGE---DFIRMEYIDGR 97 (201)
T ss_pred hhhhhhhhcccccEEEEeecc-CceEEEEEecC--CcchhhHHHHHHHHHHhhhcCCCceEEEech---hhhhhhhhcCc
Confidence 345678999999999999997 56889998664 3345778899999999886665543322222 24559999888
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC-C-CcEEECCCCcEEEeecCCCc
Q 005355 472 TLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIK-S-ANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 472 sL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik-~-~NILl~~~~~~kl~DfGl~~ 540 (700)
+|.+.-... +. +-...++++---|...| |-|+.|. | .||++.+ ..+.|+||.-+.
T Consensus 98 ~L~~~~~~~------~r----k~l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~-~~~~iIDFd~At 154 (201)
T COG2112 98 PLGKLEIGG------DR----KHLLRVLEKAYKLDRLG---IEHGELSRPWKNVLVND-RDVYIIDFDSAT 154 (201)
T ss_pred chhhhhhcc------cH----HHHHHHHHHHHHHHHhc---cchhhhcCCceeEEecC-CcEEEEEccchh
Confidence 887776432 12 22334555545566667 9999998 4 4555554 499999998876
No 467
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.95 E-value=3.6e-05 Score=84.63 Aligned_cols=139 Identities=17% Similarity=0.152 Sum_probs=90.6
Q ss_pred ceEeeeCCeEEEEEEEcCCcEEEEEEccccChh-------------------------------------hHHHHHHHHH
Q 005355 396 RILGQGGQGTVYKGMLTNGRIVAIKKSKLVDES-------------------------------------NIEQFINEVA 438 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~-------------------------------------~~~~~~~E~~ 438 (700)
+.||.-..|.||+|++++|+.||||+.+..-+. ..-+|.+|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 679999999999999999999999975542110 0112445555
Q ss_pred HHhhc----CCCc------eeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHH-HHHh
Q 005355 439 ILSQI----NHRN------VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALC-YLHS 507 (700)
Q Consensus 439 ~l~~l----~h~n------iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~-~LH~ 507 (700)
-..+. .|-+ |.+++.. -....+|+|||++|..+.|.-.-...+ ++...+.. .+.++.. -|-.
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~~g--i~~~~i~~---~l~~~~~~qIf~ 319 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDKRG--ISPHDILN---KLVEAYLEQIFK 319 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHHcC--CCHHHHHH---HHHHHHHHHHHh
Confidence 44443 3444 3333322 234568999999998777764322222 55554433 3333322 2223
Q ss_pred cCCCCeeecCCCCCcEEECC----CCcEEEeecCCCccccc
Q 005355 508 AASIPIYHRDIKSANILLDD----KYRAKVSDFGASRSVMI 544 (700)
Q Consensus 508 ~~~~~ivH~Dik~~NILl~~----~~~~kl~DfGl~~~~~~ 544 (700)
.| ++|.|=.|.||+++. ++.+.+.|||+......
T Consensus 320 ~G---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 320 TG---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred cC---CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 56 999999999999983 67899999999986643
No 468
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.93 E-value=8.8e-07 Score=96.07 Aligned_cols=183 Identities=19% Similarity=0.141 Sum_probs=130.3
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCc-eeeEEeEEEeCCcceEEEeeCCCC-C
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRN-VVKLLGCCLETEVPLLVYEFIPNG-T 472 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E~~~~g-s 472 (700)
..-++++++++++|.+....+....+..... ....-++++|.+++||| .+..++-+..++..++++++...+ +
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 3457889999999887543333334443322 44567899999999999 777777777778888999998776 2
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeee
Q 005355 473 LYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTR 552 (700)
Q Consensus 473 L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~ 552 (700)
-...+... ...+..-+...+.+.-++++++||+.- =+|+| ||+..+ ...|..||+....+.... ....
T Consensus 322 ~~~~~~~s--e~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~t 389 (829)
T KOG0576|consen 322 SALEMTVS--EIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPRT 389 (829)
T ss_pred ccccCChh--hHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc--cccc
Confidence 21111111 111334455566677788999999864 48998 777766 588999999887654332 3445
Q ss_pred eecccccccccccccCCCCcccceehHHHHHHHHHhCCCCCC
Q 005355 553 VQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVELLTGQKPIR 594 (700)
Q Consensus 553 ~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~elltg~~p~~ 594 (700)
..+++.++|||+.....+..+.|+|++++=-.+|.-|.+|-.
T Consensus 390 ~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 390 AIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred CCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 668999999999999999999999999987667776766543
No 469
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.85 E-value=0.0013 Score=70.62 Aligned_cols=75 Identities=20% Similarity=0.245 Sum_probs=55.0
Q ss_pred ceEeeeCCeEEEEEEEcCC-cEEEEEEcccc-----C--hhhHHHHHHHHHHHhhcC---CCceeeEEeEEEeCCcceEE
Q 005355 396 RILGQGGQGTVYKGMLTNG-RIVAIKKSKLV-----D--ESNIEQFINEVAILSQIN---HRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~-----~--~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 464 (700)
+.||.|.+..||++...+| +.|+||..... . +...+++..|.+.|+.+. ..++.+++.+ +.+..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 5789999999999998776 58999974321 1 224567788888888863 3457777766 44567899
Q ss_pred EeeCCCCC
Q 005355 465 YEFIPNGT 472 (700)
Q Consensus 465 ~E~~~~gs 472 (700)
||++++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 470
>PLN02876 acyl-CoA dehydrogenase
Probab=97.79 E-value=0.00023 Score=84.76 Aligned_cols=148 Identities=16% Similarity=0.232 Sum_probs=91.5
Q ss_pred cceEeeeCCeEEEEEEEcCC---cEEEEEEccccC-hhhHHHHHHHHHHHhhcC-CCce--eeEEeEEEeC---CcceEE
Q 005355 395 NRILGQGGQGTVYKGMLTNG---RIVAIKKSKLVD-ESNIEQFINEVAILSQIN-HRNV--VKLLGCCLET---EVPLLV 464 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv 464 (700)
.+.++.|.+..+|+....++ ..+++|+..... ......+.+|+++++.+. |.++ .+++.++.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 46789999999999887653 467778754322 122356889999999985 6654 7778877654 467899
Q ss_pred EeeCCCCCHHH--------------------H---HhccCCC--------CCCC--HHHHHHHHH---------------
Q 005355 465 YEFIPNGTLYQ--------------------Y---IHDQTEE--------FPIT--WEIRLRIAI--------------- 496 (700)
Q Consensus 465 ~E~~~~gsL~~--------------------~---l~~~~~~--------~~l~--~~~~~~i~~--------------- 496 (700)
|||+++..+.+ . ||..... .+.. ..++..+..
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 99998764321 1 1111100 0001 111211111
Q ss_pred HHHHHHHHHHhcCC--------CCeeecCCCCCcEEECC-CCc-EEEeecCCCccc
Q 005355 497 EVSDALCYLHSAAS--------IPIYHRDIKSANILLDD-KYR-AKVSDFGASRSV 542 (700)
Q Consensus 497 qi~~aL~~LH~~~~--------~~ivH~Dik~~NILl~~-~~~-~kl~DfGl~~~~ 542 (700)
.+...+.+|..+-+ +.++|+|+++.|||++. +.. +-|.||+++..-
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 12334566644321 34999999999999985 333 579999987643
No 471
>PRK10593 hypothetical protein; Provisional
Probab=97.63 E-value=0.00072 Score=70.41 Aligned_cols=80 Identities=10% Similarity=0.048 Sum_probs=58.0
Q ss_pred CCCccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCC---CceeeEEeEEEe---CCcceEE
Q 005355 391 NFNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINH---RNVVKLLGCCLE---TEVPLLV 464 (700)
Q Consensus 391 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~---~~~~~lv 464 (700)
.....+.||.|..+.||+....++ .+.+|..+.. .....+..|.+.|+.+.- -.+.++++.+.. .+..+||
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV 91 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL 91 (297)
T ss_pred hhheeeecCCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence 334456799999999999876555 4666764431 123578899999998853 367888887754 3568999
Q ss_pred EeeCCCCCH
Q 005355 465 YEFIPNGTL 473 (700)
Q Consensus 465 ~E~~~~gsL 473 (700)
||++++.++
T Consensus 92 mE~i~G~~~ 100 (297)
T PRK10593 92 LERLRGVSV 100 (297)
T ss_pred EeccCCEec
Confidence 999998765
No 472
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.56 E-value=0.00053 Score=68.93 Aligned_cols=73 Identities=18% Similarity=0.234 Sum_probs=45.8
Q ss_pred ceEeeeCCe-EEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC---ceeeEEeEEEeC---CcceEEEeeC
Q 005355 396 RILGQGGQG-TVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHR---NVVKLLGCCLET---EVPLLVYEFI 468 (700)
Q Consensus 396 ~~lG~G~fg-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~---~~~~lv~E~~ 468 (700)
+.|+.|+.. .||+. +..+++|..... .....+.+|.+++..+... .+.++++..... ...+++||++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 467777766 58874 235677865542 2345788999999887532 344444433322 2358899999
Q ss_pred CCCCHH
Q 005355 469 PNGTLY 474 (700)
Q Consensus 469 ~~gsL~ 474 (700)
+|.++.
T Consensus 77 ~G~~l~ 82 (235)
T cd05155 77 EGETAT 82 (235)
T ss_pred cCCCCC
Confidence 987664
No 473
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.56 E-value=0.00075 Score=67.77 Aligned_cols=140 Identities=21% Similarity=0.257 Sum_probs=80.4
Q ss_pred ceEeeeCCeEEEEEEEcC--CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCc-eeeEEeEEEeCCcceEEEeeCCCCC
Q 005355 396 RILGQGGQGTVYKGMLTN--GRIVAIKKSKLVDESNIEQFINEVAILSQINHRN-VVKLLGCCLETEVPLLVYEFIPNGT 472 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E~~~~gs 472 (700)
+.|..|-...+|+....+ ++.|++|+....... .....+|+.+++.+.... ..++++... ..++|||+++.+
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~ 78 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT 78 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence 567778888999988664 678899976543221 123347888888885333 344444332 248999999876
Q ss_pred HHHH-----------------HhccCCCC--------CC-CHHHHHHHHH----------------------HHHHHHHH
Q 005355 473 LYQY-----------------IHDQTEEF--------PI-TWEIRLRIAI----------------------EVSDALCY 504 (700)
Q Consensus 473 L~~~-----------------l~~~~~~~--------~l-~~~~~~~i~~----------------------qi~~aL~~ 504 (700)
+... +|...... .. .++.+..+.. .+.+.+..
T Consensus 79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 158 (235)
T cd05157 79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW 158 (235)
T ss_pred CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence 5321 11111111 01 1222222211 11111122
Q ss_pred H----Hhc-CCCCeeecCCCCCcEEECC-CCcEEEeecCCCc
Q 005355 505 L----HSA-ASIPIYHRDIKSANILLDD-KYRAKVSDFGASR 540 (700)
Q Consensus 505 L----H~~-~~~~ivH~Dik~~NILl~~-~~~~kl~DfGl~~ 540 (700)
| ... ....++|+|+.+.|||+++ +..+.|+||..+.
T Consensus 159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 2 211 2234899999999999998 5789999998774
No 474
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.56 E-value=0.00079 Score=64.70 Aligned_cols=125 Identities=29% Similarity=0.479 Sum_probs=89.9
Q ss_pred cCCCccceEeeeCC-eEEEEEEEcCCcEEEEEEccc---cCh------------------hhHHHHHHHHHHHhhcC---
Q 005355 390 DNFNTNRILGQGGQ-GTVYKGMLTNGRIVAIKKSKL---VDE------------------SNIEQFINEVAILSQIN--- 444 (700)
Q Consensus 390 ~~~~~~~~lG~G~f-g~Vy~~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~E~~~l~~l~--- 444 (700)
.+++.++.||.|.. |.||+++.. |+.+|+|.++. ... .....|..|-+.+.+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 88999999999999 999999986 78999998222 100 11235778888877764
Q ss_pred CCce--eeEEeEEEeC-C-----------------cceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 005355 445 HRNV--VKLLGCCLET-E-----------------VPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCY 504 (700)
Q Consensus 445 h~ni--v~l~~~~~~~-~-----------------~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~ 504 (700)
+.++ ++.+|+..=. + ...||.||++... .+. ..-+.+|.+-|..
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~----~~~~~~~~~dl~~ 179 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ----IRDIPQMLRDLKI 179 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc----hhHHHHHHHHHHH
Confidence 5566 8889887422 0 1136777765432 122 3345677888899
Q ss_pred HHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 505 LHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 505 LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
||+.+ |+-+|+++.|.. .-||+|||.+
T Consensus 180 ~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 180 LHKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHCC---eeeccCcccccc-----CCEEEecccC
Confidence 99999 999999999986 4588999854
No 475
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.53 E-value=0.00057 Score=79.78 Aligned_cols=196 Identities=18% Similarity=0.188 Sum_probs=137.0
Q ss_pred HHHHHHHHhhcCCCceeeEEeEEEeCCcce----EEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 005355 433 FINEVAILSQINHRNVVKLLGCCLETEVPL----LVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSA 508 (700)
Q Consensus 433 ~~~E~~~l~~l~h~niv~l~~~~~~~~~~~----lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 508 (700)
..-|++.+.++.|+|++.++.+-.+....- +..|++...++...+..... ++....+.+..++.+||+|+|+.
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~---i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGS---IPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccc---cCHHHHHHHHHHHhhhHHHHHHh
Confidence 345666777889999999999887654332 44577778888888876543 88899999999999999999998
Q ss_pred CCCCeeecCCCCC---cEEECCCCcEEEe--ecCCCcccccCCceeeeeeecccccccccccccCCCCc--ccceehHHH
Q 005355 509 ASIPIYHRDIKSA---NILLDDKYRAKVS--DFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTE--KSDVYSFGV 581 (700)
Q Consensus 509 ~~~~ivH~Dik~~---NILl~~~~~~kl~--DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~--ksDVwSlG~ 581 (700)
. +.|.-+..+ +--.+..+.+.++ ||+.+.......... ...-+..+.+||......+.. +.|+|.+|.
T Consensus 306 ~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~--~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgl 380 (1351)
T KOG1035|consen 306 S---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF--SDLLAEIRNADEDLKENTAKKSRLTDLWCLGL 380 (1351)
T ss_pred c---cceeEEecccccccccCccceeecchhhhcccccCCCcccch--hhcCccccccccccccccchhhhhhHHHHHHH
Confidence 6 666555555 5555677778877 898887654333222 222455677888877665544 479999999
Q ss_pred HHHHHHhCCCCCCCCCchhhhhHHHHHHHHHHhcchhhhcchhhhhccCHHHHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 005355 582 VLVELLTGQKPIRSTDSEEDKSLVGYFLEAMKENRLFEVLDARVLKEAKEEEIITVAMLAKRCLNMIGKKRPTMKEAAFE 661 (700)
Q Consensus 582 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPs~~evl~~ 661 (700)
.+..+..|..+-..... ...+++. .....+.+...+|+..++++|+++.+++..
T Consensus 381 l~~~~~~~~~i~~~~~~------------------~~~~l~~--------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~ 434 (1351)
T KOG1035|consen 381 LLLQLSQGEDISEKSAV------------------PVSLLDV--------LSTSELLDALPKCLDEDSEERLSALELLTH 434 (1351)
T ss_pred HHhhhhhcCcccccccc------------------hhhhhcc--------ccchhhhhhhhhhcchhhhhccchhhhhhc
Confidence 99999998655321110 0111111 111146678899999999999999999885
Q ss_pred H
Q 005355 662 L 662 (700)
Q Consensus 662 L 662 (700)
.
T Consensus 435 ~ 435 (1351)
T KOG1035|consen 435 P 435 (1351)
T ss_pred h
Confidence 4
No 476
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.46 E-value=0.0006 Score=69.51 Aligned_cols=137 Identities=15% Similarity=0.149 Sum_probs=77.3
Q ss_pred EeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCCce-eeEEeEEEeCCcceEEEeeCCCCCHHHH
Q 005355 398 LGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV-VKLLGCCLETEVPLLVYEFIPNGTLYQY 476 (700)
Q Consensus 398 lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~~~gsL~~~ 476 (700)
+..|-...+|+... +++.+++|..........-...+|.++++.+....+ .+++... ...+|+||+++.++...
T Consensus 4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~----~~~~v~e~i~G~~~~~~ 78 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN----EHWLLVEWLEGEVITLD 78 (256)
T ss_pred CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe----CCEEEEEeccCcccccc
Confidence 45577788998874 467888887554322211235778888888854323 3444432 13799999998665321
Q ss_pred -----------------HhccCC-CCCCCHH-HHHHHHHHH---------HHHHHHHHhc-----CCCCeeecCCCCCcE
Q 005355 477 -----------------IHDQTE-EFPITWE-IRLRIAIEV---------SDALCYLHSA-----ASIPIYHRDIKSANI 523 (700)
Q Consensus 477 -----------------l~~~~~-~~~l~~~-~~~~i~~qi---------~~aL~~LH~~-----~~~~ivH~Dik~~NI 523 (700)
||.... ..+++.. .+..+..++ ...+..+... ....++|+|+.|.||
T Consensus 79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni 158 (256)
T TIGR02721 79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL 158 (256)
T ss_pred cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence 111111 1112221 111211111 1112222221 123489999999999
Q ss_pred EECCCCcEEEeecCCCc
Q 005355 524 LLDDKYRAKVSDFGASR 540 (700)
Q Consensus 524 Ll~~~~~~kl~DfGl~~ 540 (700)
++++++ +.|+||..+.
T Consensus 159 l~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 159 VVTPQG-LKLIDWEYAS 174 (256)
T ss_pred EEeCCC-CEEEeccccC
Confidence 999876 7899998775
No 477
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.04 E-value=0.004 Score=65.16 Aligned_cols=140 Identities=24% Similarity=0.326 Sum_probs=82.0
Q ss_pred ceEeeeCCeEEEEEEEcC-------CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCc-eeeEEeEEEeCCcceEEEee
Q 005355 396 RILGQGGQGTVYKGMLTN-------GRIVAIKKSKLVDESNIEQFINEVAILSQINHRN-VVKLLGCCLETEVPLLVYEF 467 (700)
Q Consensus 396 ~~lG~G~fg~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E~ 467 (700)
+.|..|-...+|+....+ ++.+++|+...... ...+..+|.+++..+.... ..++++.+. -.+|+||
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~r~~E~~~~~~l~~~g~~P~~~~~~~----~~~v~e~ 78 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-LLIDRERELVVFARLSERNLGPKLYGIFP----NGRIEEF 78 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-ceechHHHHHHHHHHHhCCCCCceEEEeC----CCchhhe
Confidence 455666667899888654 57899998665332 2245678888888875333 334555443 2468999
Q ss_pred CCCCCHHHH-----------------HhccCCCC--------CCCHHHHHH--------------------------HHH
Q 005355 468 IPNGTLYQY-----------------IHDQTEEF--------PITWEIRLR--------------------------IAI 496 (700)
Q Consensus 468 ~~~gsL~~~-----------------l~~~~~~~--------~l~~~~~~~--------------------------i~~ 496 (700)
++|.++... +|...... +.-+..+.. +..
T Consensus 79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T cd05156 79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE 158 (302)
T ss_pred eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence 988765431 11111110 001111111 111
Q ss_pred HHHHHHHHHHh------cCCCCeeecCCCCCcEEECCC----CcEEEeecCCCc
Q 005355 497 EVSDALCYLHS------AASIPIYHRDIKSANILLDDK----YRAKVSDFGASR 540 (700)
Q Consensus 497 qi~~aL~~LH~------~~~~~ivH~Dik~~NILl~~~----~~~kl~DfGl~~ 540 (700)
++...+..|.. .....++|+|+.+.|||++++ +.+.++||..+.
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 22223334432 133458999999999999985 789999999885
No 478
>PRK05231 homoserine kinase; Provisional
Probab=96.98 E-value=0.019 Score=60.45 Aligned_cols=142 Identities=14% Similarity=0.162 Sum_probs=75.6
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC--ceeeEEe------EEEeCCcceEEEe
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHR--NVVKLLG------CCLETEVPLLVYE 466 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~------~~~~~~~~~lv~E 466 (700)
.+.|..|....+|+....+| .+++|+...... +....|+.++..|... .+.+.+. +....+..++++|
T Consensus 27 ~~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~~~---~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~ 102 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTTQG-EYVLTLFERLTA---EDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT 102 (319)
T ss_pred cchhccccccceEEEEeCCC-cEEEEEeccCCh---HHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence 34566777788999886655 688898753222 3333455555554211 1333332 1223456789999
Q ss_pred eCCCCCHH-----------HH---HhccCCC--------CCCCH-HHHHH------------HHHH-HHHHHHHHHhc--
Q 005355 467 FIPNGTLY-----------QY---IHDQTEE--------FPITW-EIRLR------------IAIE-VSDALCYLHSA-- 508 (700)
Q Consensus 467 ~~~~gsL~-----------~~---l~~~~~~--------~~l~~-~~~~~------------i~~q-i~~aL~~LH~~-- 508 (700)
|++|..+. +. +|..... ..+.| ..... ...+ +...++.+.+.
T Consensus 103 ~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 182 (319)
T PRK05231 103 FLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAW 182 (319)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccc
Confidence 99886431 11 1111111 01111 11111 1111 11222333211
Q ss_pred --CCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 509 --ASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 509 --~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
-...++|+|+.+.|||++++...-|+||+.+.
T Consensus 183 ~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 183 PALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred ccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 12349999999999999977656899999875
No 479
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.97 E-value=0.005 Score=63.41 Aligned_cols=75 Identities=21% Similarity=0.252 Sum_probs=49.0
Q ss_pred CccceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcC---CCceeeEEeEEEeCCcceEEEeeCC
Q 005355 393 NTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQIN---HRNVVKLLGCCLETEVPLLVYEFIP 469 (700)
Q Consensus 393 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~E~~~ 469 (700)
+..+.|+-|....+|+.. .+++.+.||.-. ......|..|++-|+.|. --.+.+++++....+..+||+||++
T Consensus 20 ~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~ 95 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE 95 (288)
T ss_dssp -EEEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred eeeEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence 445678988899999977 568899999876 233356788888888873 4568889998888888899999998
Q ss_pred CC
Q 005355 470 NG 471 (700)
Q Consensus 470 ~g 471 (700)
.+
T Consensus 96 ~~ 97 (288)
T PF03881_consen 96 MG 97 (288)
T ss_dssp --
T ss_pred CC
Confidence 66
No 480
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.89 E-value=0.009 Score=62.66 Aligned_cols=143 Identities=19% Similarity=0.213 Sum_probs=80.6
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC--ceeeEEeE------EEeCCcceEEEe
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHR--NVVKLLGC------CLETEVPLLVYE 466 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~------~~~~~~~~lv~E 466 (700)
.+.++.|....+|+....++ .+++|+..... ..+....|++++..|... .+.+++.. ....+..++++|
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e 103 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE 103 (307)
T ss_pred ccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence 45677777789999876544 57788765421 123455667777666322 23444432 122355689999
Q ss_pred eCCCCCHH-----------HH---HhccCCCC---------CCCHHHHH------------HHHHHHHHHHHHHHh----
Q 005355 467 FIPNGTLY-----------QY---IHDQTEEF---------PITWEIRL------------RIAIEVSDALCYLHS---- 507 (700)
Q Consensus 467 ~~~~gsL~-----------~~---l~~~~~~~---------~l~~~~~~------------~i~~qi~~aL~~LH~---- 507 (700)
|++|.++. .. +|...... .-.|.... .....+.+.+++|..
T Consensus 104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~ 183 (307)
T TIGR00938 104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR 183 (307)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence 99885431 11 12111110 01111110 011223345555543
Q ss_pred cCCCCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 508 AASIPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 508 ~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.-...++|+|+.+.||++++++.+.|.||+.+.
T Consensus 184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred cCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 112349999999999999998777899999774
No 481
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.80 E-value=0.0018 Score=65.72 Aligned_cols=134 Identities=19% Similarity=0.206 Sum_probs=93.6
Q ss_pred CCccceEeeeCCeEEEEEEEcCCcEEEEEEccccCh------------------h----hHHHHHHHHHHHhhcCC--Cc
Q 005355 392 FNTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDE------------------S----NIEQFINEVAILSQINH--RN 447 (700)
Q Consensus 392 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~------------------~----~~~~~~~E~~~l~~l~h--~n 447 (700)
+.+.+.||-|.-+.+|.+-..+|++.++|.-..... . .+-...+|...|+.|.. --
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 567889999999999999999999999984222100 0 01223567777777742 23
Q ss_pred eeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEECC
Q 005355 448 VVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILLDD 527 (700)
Q Consensus 448 iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~ 527 (700)
+.+.+++ +..++|||++.+-+|...-+-. . ...+...+..-+--|-.+| +||+|..--||++++
T Consensus 174 VPkpiD~----~RH~Vvmelv~g~Pl~~v~~v~------d---~~~ly~~lm~~Iv~la~~G---lIHgDFNEFNimv~d 237 (465)
T KOG2268|consen 174 VPKPIDH----NRHCVVMELVDGYPLRQVRHVE------D---PPTLYDDLMGLIVRLANHG---LIHGDFNEFNIMVKD 237 (465)
T ss_pred CCCcccc----cceeeHHHhhcccceeeeeecC------C---hHHHHHHHHHHHHHHHHcC---ceecccchheeEEec
Confidence 4444433 4457899999887776654322 1 2234445555566777889 999999999999999
Q ss_pred CCcEEEeecCCCcc
Q 005355 528 KYRAKVSDFGASRS 541 (700)
Q Consensus 528 ~~~~kl~DfGl~~~ 541 (700)
+..++++||--...
T Consensus 238 d~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 238 DDKIVVIDFPQMVS 251 (465)
T ss_pred CCCEEEeechHhhc
Confidence 99999999965543
No 482
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.74 E-value=0.024 Score=59.02 Aligned_cols=142 Identities=18% Similarity=0.175 Sum_probs=84.0
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhcCCC--ceeeEEeE------EEeCCcceEEEe
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQINHR--NVVKLLGC------CLETEVPLLVYE 466 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~------~~~~~~~~lv~E 466 (700)
.+.|..|....+|+.... +..+++|+.... ..+....|++++..+.+. .+.+++.. ....+..++|++
T Consensus 19 i~~i~~G~~n~~y~v~~~-~~~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 19 FEGISAGIENTNYFVTTD-SGRYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred eecccCccccceEEEEeC-CCcEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 456777777899998765 457888987642 235566788888777433 24444431 223455689999
Q ss_pred eCCCCCHHH----H----------HhccCCC--------CCCCHHHHH----------HHHHHHHHHHHHHHhc----CC
Q 005355 467 FIPNGTLYQ----Y----------IHDQTEE--------FPITWEIRL----------RIAIEVSDALCYLHSA----AS 510 (700)
Q Consensus 467 ~~~~gsL~~----~----------l~~~~~~--------~~l~~~~~~----------~i~~qi~~aL~~LH~~----~~ 510 (700)
|++|..+.. . +|..... ....|.... .....+..++.++.+. -.
T Consensus 95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 174 (296)
T cd05153 95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP 174 (296)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence 998866432 1 1111100 011121110 0111233445555531 12
Q ss_pred CCeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 511 IPIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 511 ~~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
..++|+|+.|.|||++++..+.|.||+.+.
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 348999999999999998777899998774
No 483
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.63 E-value=0.018 Score=59.77 Aligned_cols=136 Identities=15% Similarity=0.228 Sum_probs=77.4
Q ss_pred EEEEEEEcCCcEEEEEEcc-ccChhhHHHHHHHHHHHhhcCC--CceeeEEeEEEeCC--cceEEEeeCCCCCHHHHHhc
Q 005355 405 TVYKGMLTNGRIVAIKKSK-LVDESNIEQFINEVAILSQINH--RNVVKLLGCCLETE--VPLLVYEFIPNGTLYQYIHD 479 (700)
Q Consensus 405 ~Vy~~~~~~~~~vavK~~~-~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~--~~~lv~E~~~~gsL~~~l~~ 479 (700)
.+|..... ++++++++-. ...........+|.++++.+.- --+...++.+.++. .++.||+|+++..+.+.+..
T Consensus 40 ~t~~~~~~-~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~ 118 (321)
T COG3173 40 DTFRLGDT-GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPP 118 (321)
T ss_pred ceEEEecC-CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCc
Confidence 44444443 6777777221 2233445667788888888743 34455666676665 67999999987322221111
Q ss_pred cCC-----------------------------------CCCCCHHHHHHHH--------HHHHHHHHHHHhcC-----CC
Q 005355 480 QTE-----------------------------------EFPITWEIRLRIA--------IEVSDALCYLHSAA-----SI 511 (700)
Q Consensus 480 ~~~-----------------------------------~~~l~~~~~~~i~--------~qi~~aL~~LH~~~-----~~ 511 (700)
... +..-.|....+.+ -....-..+|+.+. .+
T Consensus 119 ~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~ 198 (321)
T COG3173 119 ESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPP 198 (321)
T ss_pred ccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCc
Confidence 000 0000111111100 01222234444332 24
Q ss_pred CeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 512 PIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 512 ~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
.++|+|+.+.|++|+++..+-|.||+++..
T Consensus 199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~l 228 (321)
T COG3173 199 VLVHGDYRPGNLIIDPGRPTGVLDWELATL 228 (321)
T ss_pred eeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence 699999999999999988899999999864
No 484
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.61 E-value=0.016 Score=59.71 Aligned_cols=31 Identities=23% Similarity=0.487 Sum_probs=25.4
Q ss_pred CCeeecCCCCCcEEECCCCc-EEEeecCCCcc
Q 005355 511 IPIYHRDIKSANILLDDKYR-AKVSDFGASRS 541 (700)
Q Consensus 511 ~~ivH~Dik~~NILl~~~~~-~kl~DfGl~~~ 541 (700)
+.++|+|+.+.|||++++++ .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 34899999999999997555 56999998753
No 485
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.58 E-value=0.25 Score=52.17 Aligned_cols=79 Identities=18% Similarity=0.194 Sum_probs=50.6
Q ss_pred eEeeeCCeEEEEEEEcCC-cEEEEEEccc----c---ChhhHHHHHHHHHHHhhcC--CC-ceeeEEeEEEeCCcceEEE
Q 005355 397 ILGQGGQGTVYKGMLTNG-RIVAIKKSKL----V---DESNIEQFINEVAILSQIN--HR-NVVKLLGCCLETEVPLLVY 465 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~~~-~~vavK~~~~----~---~~~~~~~~~~E~~~l~~l~--h~-niv~l~~~~~~~~~~~lv~ 465 (700)
.||-|....||++...++ +.|+||.... . -+-..++..-|.+.|+... -| .+.+++. .+.+...+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence 578899999999997654 6899996331 1 1334566667888887653 34 3444443 3445557999
Q ss_pred eeCCCC-CHHHHH
Q 005355 466 EFIPNG-TLYQYI 477 (700)
Q Consensus 466 E~~~~g-sL~~~l 477 (700)
|+++.. .|.+.|
T Consensus 80 EdL~~~~ilR~~L 92 (370)
T TIGR01767 80 EDLSHHKIARKGL 92 (370)
T ss_pred hhCccchHHHHHH
Confidence 998653 343444
No 486
>PLN02236 choline kinase
Probab=96.51 E-value=0.019 Score=61.12 Aligned_cols=139 Identities=20% Similarity=0.231 Sum_probs=78.6
Q ss_pred eEeeeCCeEEEEEEEcC-----CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCce-eeEEeEEEeCCcceEEEeeCCC
Q 005355 397 ILGQGGQGTVYKGMLTN-----GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV-VKLLGCCLETEVPLLVYEFIPN 470 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~~~ 470 (700)
.|-.|-.-.+|+..+.+ ++.|++|+.........+ -.+|..+++.+...++ .++++.+... .|.||+++
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g 117 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHA 117 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCC
Confidence 34445666788877532 367889987654332222 3678888888854333 3455555322 58999987
Q ss_pred CCHHHH-----------------HhccCCC---CCCCHHHHHHHHHHH-----------------HHHHHHHH----h-c
Q 005355 471 GTLYQY-----------------IHDQTEE---FPITWEIRLRIAIEV-----------------SDALCYLH----S-A 508 (700)
Q Consensus 471 gsL~~~-----------------l~~~~~~---~~l~~~~~~~i~~qi-----------------~~aL~~LH----~-~ 508 (700)
.+|... +|..... ....++.+..+..++ ...+..|. . .
T Consensus 118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~ 197 (344)
T PLN02236 118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD 197 (344)
T ss_pred CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence 665421 1211100 012233333333221 11122222 1 1
Q ss_pred CCCCeeecCCCCCcEEECC-CCcEEEeecCCCc
Q 005355 509 ASIPIYHRDIKSANILLDD-KYRAKVSDFGASR 540 (700)
Q Consensus 509 ~~~~ivH~Dik~~NILl~~-~~~~kl~DfGl~~ 540 (700)
....++|+|+++.|||+++ ++.+.|+||..+.
T Consensus 198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 2234899999999999986 4689999998775
No 487
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.37 E-value=0.11 Score=55.62 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=49.9
Q ss_pred cceEeeeCCeEEEEEEEcC-CcEEEEEEccc---c---ChhhHHHHHHHHHHHhhcC--CC-ceeeEEeEEEeCCcceEE
Q 005355 395 NRILGQGGQGTVYKGMLTN-GRIVAIKKSKL---V---DESNIEQFINEVAILSQIN--HR-NVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~---~---~~~~~~~~~~E~~~l~~l~--h~-niv~l~~~~~~~~~~~lv 464 (700)
.+.||-|.-..||++...+ ++.|+||.... . -+-..++..-|.+.|+... -| .+.+++.+ +.+...+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence 4578999999999999743 56899996321 1 1334667778888888763 34 45555543 44455788
Q ss_pred EeeCCC
Q 005355 465 YEFIPN 470 (700)
Q Consensus 465 ~E~~~~ 470 (700)
||+++.
T Consensus 112 MEdL~~ 117 (409)
T PRK12396 112 MEDLSD 117 (409)
T ss_pred HHhCcc
Confidence 998864
No 488
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.35 E-value=0.00069 Score=80.76 Aligned_cols=162 Identities=14% Similarity=0.007 Sum_probs=116.4
Q ss_pred HHHHHHHHHHhhcCCCceeeEEeEEE--eCCcceEEEeeCCCCCHHHHHhccCCC-CCCCHHHHHHHHHHHHHHHHHHHh
Q 005355 431 EQFINEVAILSQINHRNVVKLLGCCL--ETEVPLLVYEFIPNGTLYQYIHDQTEE-FPITWEIRLRIAIEVSDALCYLHS 507 (700)
Q Consensus 431 ~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~lv~E~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~ 507 (700)
+....|..-++...|+++.....-.. +....+..++++..|.+.+.|.+..++ ..+..........+.+.+..-.|+
T Consensus 1274 emll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred HhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence 33444555555567888776655443 234557899999999999998776443 234444444444444666666665
Q ss_pred cC--CCCeeecCCCCCcEEECCCCcEEEeecCCCcccccCCceeeeeeecccccccccccccCCCCcccceehHHHHHHH
Q 005355 508 AA--SIPIYHRDIKSANILLDDKYRAKVSDFGASRSVMIDQTHLTTRVQGTFGYLDPEYFRSSQFTEKSDVYSFGVVLVE 585 (700)
Q Consensus 508 ~~--~~~ivH~Dik~~NILl~~~~~~kl~DfGl~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDVwSlG~il~e 585 (700)
.. ....+|+++|+-|.+|..+.++|++++|+.+.. ...........+++-|++|+....-.++.++|+|..++-+|+
T Consensus 1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIk-np~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIK-NPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred cccCCccchhhhhhhhccceecCCccccccccccccc-CchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 32 234799999999999999999999999999832 222333444557888999999999999999999999999999
Q ss_pred HHhCCCCC
Q 005355 586 LLTGQKPI 593 (700)
Q Consensus 586 lltg~~p~ 593 (700)
+-.|..+|
T Consensus 1433 rs~~n~~f 1440 (2724)
T KOG1826|consen 1433 RSDGNAYF 1440 (2724)
T ss_pred HhcccHHH
Confidence 98887765
No 489
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.34 E-value=0.031 Score=58.04 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=93.7
Q ss_pred CccceEeeeCCeEEEEEEEcCCcEEEEEEcccc-------Ch------------------hhHH-HHHHHHHHHhhcCCC
Q 005355 393 NTNRILGQGGQGTVYKGMLTNGRIVAIKKSKLV-------DE------------------SNIE-QFINEVAILSQINHR 446 (700)
Q Consensus 393 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~-------~~------------------~~~~-~~~~E~~~l~~l~h~ 446 (700)
.+.-.|..|--+.||.+.-.+|..+|||+.+.. +. ...+ ....|++-|.+|+..
T Consensus 147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 345578889999999999889999999975431 00 1111 123577777777543
Q ss_pred ceeeEEeEEEeCCcceEEEeeCCCCCH-HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCcEEE
Q 005355 447 NVVKLLGCCLETEVPLLVYEFIPNGTL-YQYIHDQTEEFPITWEIRLRIAIEVSDALCYLHSAASIPIYHRDIKSANILL 525 (700)
Q Consensus 447 niv~l~~~~~~~~~~~lv~E~~~~gsL-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl 525 (700)
.|.-.--.... ..+|||+|+....- .-.|+ ...++...+..+-.|++.-|.-|-+.. .+||.||+--|+|+
T Consensus 227 GIP~PePIlLk--~hVLVM~FlGrdgw~aPkLK----d~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Ly 298 (520)
T KOG2270|consen 227 GIPCPEPILLK--NHVLVMEFLGRDGWAAPKLK----DASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLY 298 (520)
T ss_pred CCCCCCceeee--cceEeeeeccCCCCcCcccc----cccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheE
Confidence 33322111111 23799999953111 11111 223777788888889999999888765 39999999999998
Q ss_pred CCCCcEEEeecCCCccc
Q 005355 526 DDKYRAKVSDFGASRSV 542 (700)
Q Consensus 526 ~~~~~~kl~DfGl~~~~ 542 (700)
.+. .+.|+|-+-+...
T Consensus 299 hdG-~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 299 HDG-KLYIIDVSQSVEH 314 (520)
T ss_pred ECC-EEEEEEccccccC
Confidence 654 8999999877644
No 490
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.07 E-value=0.074 Score=57.14 Aligned_cols=80 Identities=16% Similarity=0.153 Sum_probs=53.0
Q ss_pred cceEeeeCCeEEEEEEEcCCcEEEEEEccc----cCh---hhHHHHHHHHHHHhhcC---CCceeeEEeEEEeCCcceEE
Q 005355 395 NRILGQGGQGTVYKGMLTNGRIVAIKKSKL----VDE---SNIEQFINEVAILSQIN---HRNVVKLLGCCLETEVPLLV 464 (700)
Q Consensus 395 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~----~~~---~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 464 (700)
.+.||.|....||+.... ++.++||+... ... -...+-..|++.|+.+. ..++.+++.++. +..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 457899999999998764 56799997541 111 13344455677776653 357888888776 446889
Q ss_pred EeeCCC--CCHHHHH
Q 005355 465 YEFIPN--GTLYQYI 477 (700)
Q Consensus 465 ~E~~~~--gsL~~~l 477 (700)
||++++ ..+.+.+
T Consensus 114 ME~L~~~~~ilr~~L 128 (418)
T PLN02756 114 MRYLEPPHIILRKGL 128 (418)
T ss_pred EeecCCcceehhhhh
Confidence 999976 3344444
No 491
>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]
Probab=95.80 E-value=0.013 Score=71.75 Aligned_cols=48 Identities=19% Similarity=0.517 Sum_probs=33.4
Q ss_pred CCcccccCCCceeeeccCCCcc----------ccCCcccccccccCCCCCcccCCCCCC
Q 005355 231 DNRCSIQLTSGYSCLCHRSFNG----------LNDGYCVGDLLCDSASSPYNCSGCPNG 279 (700)
Q Consensus 231 ~s~c~~~~~~gy~C~C~~Gy~G----------~~~~~~~~~~~c~~~~~py~c~~c~~~ 279 (700)
..+|... ++||.|+|+.||.| |-...|.-.++|.+..+-|+|.|.+++
T Consensus 3914 GgtCip~-~n~f~CnC~~gyTG~~Ce~~Gi~eCs~n~C~~gg~C~n~~gsf~CncT~g~ 3971 (4289)
T KOG1219|consen 3914 GGTCIPF-YNGFLCNCPNGYTGKRCEARGISECSKNVCGTGGQCINIPGSFHCNCTPGI 3971 (4289)
T ss_pred CCEEEec-CCCeeEeCCCCccCceeecccccccccccccCCceeeccCCceEeccChhH
Confidence 3455433 67999999999999 333345555888888888888755443
No 492
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=95.63 E-value=0.014 Score=62.92 Aligned_cols=50 Identities=16% Similarity=0.235 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhhcCCCceeeEEeEEEeCC-cceEEEeeCCCCCHHHHHhccC
Q 005355 431 EQFINEVAILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGTLYQYIHDQT 481 (700)
Q Consensus 431 ~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~ 481 (700)
.++.....+++.+.|+|+...+++..... ...+|+|++ +.+|.+++....
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~ 77 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN 77 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc
Confidence 56777888999999999999998876543 357889988 779999987654
No 493
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.36 E-value=0.44 Score=49.85 Aligned_cols=28 Identities=36% Similarity=0.434 Sum_probs=24.6
Q ss_pred CeeecCCCCCcEEECCCCcEEEeecCCCc
Q 005355 512 PIYHRDIKSANILLDDKYRAKVSDFGASR 540 (700)
Q Consensus 512 ~ivH~Dik~~NILl~~~~~~kl~DfGl~~ 540 (700)
.++|+|+.+.||+++. +.+.|+||+.+.
T Consensus 188 ~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 188 GFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred ceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 4899999999999988 578999998664
No 494
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.19 E-value=0.034 Score=54.71 Aligned_cols=29 Identities=28% Similarity=0.467 Sum_probs=20.7
Q ss_pred CeeecCCCCCcEEE-CCCCcEEEeecCCCc
Q 005355 512 PIYHRDIKSANILL-DDKYRAKVSDFGASR 540 (700)
Q Consensus 512 ~ivH~Dik~~NILl-~~~~~~kl~DfGl~~ 540 (700)
.+.|+|+.+.|||+ +.++.++++||..+.
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~ 173 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG 173 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence 37899999999999 888999999999885
No 495
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.01 E-value=0.16 Score=53.77 Aligned_cols=139 Identities=17% Similarity=0.214 Sum_probs=76.7
Q ss_pred eEeeeCCeEEEEEEEcC----CcEEEEEEccccChhhHHHHHHHHHHHhhcCCCce-eeEEeEEEeCCcceEEEeeCCCC
Q 005355 397 ILGQGGQGTVYKGMLTN----GRIVAIKKSKLVDESNIEQFINEVAILSQINHRNV-VKLLGCCLETEVPLLVYEFIPNG 471 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~~~g 471 (700)
.|..|-.-.+|+....+ +..|++|+....... .-.-.+|..+++.+...++ .++++++. . .+|.+|+++.
T Consensus 21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~-~---G~i~~fi~g~ 95 (330)
T PLN02421 21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFG-N---GMIQSFINAR 95 (330)
T ss_pred EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeC-C---cEeehhhcCC
Confidence 44446666788876543 237888987653332 2233578888888864444 34555542 2 2588998776
Q ss_pred CHHH-------H----------HhccCC---CCCCCHHHHHHHHHHH----------------------HHHHHH----H
Q 005355 472 TLYQ-------Y----------IHDQTE---EFPITWEIRLRIAIEV----------------------SDALCY----L 505 (700)
Q Consensus 472 sL~~-------~----------l~~~~~---~~~l~~~~~~~i~~qi----------------------~~aL~~----L 505 (700)
+|.. . +|.... ..+-.+..+.++..++ .+-+.. +
T Consensus 96 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 175 (330)
T PLN02421 96 TLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT 175 (330)
T ss_pred CCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence 5421 0 111110 0111233333322221 111222 2
Q ss_pred HhcC-CCCeeecCCCCCcEEECC-CCcEEEeecCCCc
Q 005355 506 HSAA-SIPIYHRDIKSANILLDD-KYRAKVSDFGASR 540 (700)
Q Consensus 506 H~~~-~~~ivH~Dik~~NILl~~-~~~~kl~DfGl~~ 540 (700)
.+.+ +..+.|+|+.+.|||+++ ++.++++||..+.
T Consensus 176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 1112 223789999999999975 5789999999875
No 496
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=94.78 E-value=0.41 Score=50.20 Aligned_cols=30 Identities=13% Similarity=0.235 Sum_probs=27.0
Q ss_pred CeeecCCCCCcEEECCCCcEEEeecCCCcc
Q 005355 512 PIYHRDIKSANILLDDKYRAKVSDFGASRS 541 (700)
Q Consensus 512 ~ivH~Dik~~NILl~~~~~~kl~DfGl~~~ 541 (700)
.++|+|+.++|||+++++.+.|+||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 499999999999999999999999987753
No 497
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.45 E-value=0.16 Score=49.20 Aligned_cols=103 Identities=16% Similarity=0.082 Sum_probs=64.6
Q ss_pred EEEEEEccccChh-hHHHHHHHHHHHhhcCCCceeeEEeEEEeCCcceEEEeeCCCCCHHHHHhccCCCCCCCHHHHHHH
Q 005355 416 IVAIKKSKLVDES-NIEQFINEVAILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGTLYQYIHDQTEEFPITWEIRLRI 494 (700)
Q Consensus 416 ~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~l~~~~~~~i 494 (700)
...+|++...+-. ....|..+.+++.++. .|+++..- .....-++.|.+... ... ...+
T Consensus 87 ~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~---------------~i~-~~N~ 146 (308)
T PF07387_consen 87 PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKI---------------KIN-FSNF 146 (308)
T ss_pred hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCc---------------ccc-hhHH
Confidence 3455655544333 4466788888888874 45555521 233445888877321 000 1112
Q ss_pred HHHHHHHHHHHHhcCCCCeeecCCCCCcEEECCCCcEEEeecCCC
Q 005355 495 AIEVSDALCYLHSAASIPIYHRDIKSANILLDDKYRAKVSDFGAS 539 (700)
Q Consensus 495 ~~qi~~aL~~LH~~~~~~ivH~Dik~~NILl~~~~~~kl~DfGl~ 539 (700)
+..=+++|.-.|+.. ...+|+|-.|+||+-|..|.+||.|-+..
T Consensus 147 i~agi~~L~~fH~~~-~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 147 ITAGIKDLMDFHSEN-QHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred HHHhHHHHHHhhccC-CCeecCCCChhheeecCCCCEEecChhhh
Confidence 222246677788543 24999999999999999999999997643
No 498
>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins.; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.
Probab=94.15 E-value=0.027 Score=37.90 Aligned_cols=25 Identities=24% Similarity=0.820 Sum_probs=17.6
Q ss_pred ccccCCcccccCCCceeeeccCCCcc
Q 005355 227 TCNKDNRCSIQLTSGYSCLCHRSFNG 252 (700)
Q Consensus 227 ~C~s~s~c~~~~~~gy~C~C~~Gy~G 252 (700)
.|..+..|.+..+ .|.|.|+.||.|
T Consensus 7 ~C~~nA~C~~~~~-~~~C~C~~Gy~G 31 (36)
T PF12947_consen 7 GCHPNATCTNTGG-SYTCTCKPGYEG 31 (36)
T ss_dssp GS-TTCEEEE-TT-SEEEEE-CEEEC
T ss_pred CCCCCcEeecCCC-CEEeECCCCCcc
Confidence 4666667776544 899999999999
No 499
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.79 E-value=0.81 Score=44.85 Aligned_cols=74 Identities=19% Similarity=0.265 Sum_probs=51.4
Q ss_pred eEeeeCCeEEEEEEEcCCcEEEEEEccccChhhHHHHHHHHHHHhhc---CCCceeeEEeEEEeCCcceEEEeeCCCCCH
Q 005355 397 ILGQGGQGTVYKGMLTNGRIVAIKKSKLVDESNIEQFINEVAILSQI---NHRNVVKLLGCCLETEVPLLVYEFIPNGTL 473 (700)
Q Consensus 397 ~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~E~~~~gsL 473 (700)
.+.-|.--..|...+ +...+.||.-. ......|..|+.-|..| +.-.+.+++.+-.+.++.++|+||++-+.+
T Consensus 23 ~v~gG~inea~~v~d-g~~~~FvK~n~---~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~ 98 (286)
T COG3001 23 EVSGGDINEAWRLRD-GTDPFFVKCNQ---REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL 98 (286)
T ss_pred ccCCccccceeEeec-CCcceEEEecc---hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence 343343344454433 35678888644 34456788888877776 446688899999999999999999998665
Q ss_pred H
Q 005355 474 Y 474 (700)
Q Consensus 474 ~ 474 (700)
.
T Consensus 99 d 99 (286)
T COG3001 99 D 99 (286)
T ss_pred C
Confidence 5
No 500
>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins. The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....
Probab=93.61 E-value=0.028 Score=36.75 Aligned_cols=26 Identities=27% Similarity=0.787 Sum_probs=22.1
Q ss_pred ccccCCcccccCCCceeeeccCCCcc
Q 005355 227 TCNKDNRCSIQLTSGYSCLCHRSFNG 252 (700)
Q Consensus 227 ~C~s~s~c~~~~~~gy~C~C~~Gy~G 252 (700)
-|...++|.+....+|.|.|..||.|
T Consensus 5 ~C~n~g~C~~~~~~~y~C~C~~G~~G 30 (32)
T PF00008_consen 5 PCQNGGTCIDLPGGGYTCECPPGYTG 30 (32)
T ss_dssp SSTTTEEEEEESTSEEEEEEBTTEES
T ss_pred cCCCCeEEEeCCCCCEEeECCCCCcc
Confidence 47777888876578999999999999
Done!