Query 005360
Match_columns 700
No_of_seqs 507 out of 2636
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 23:08:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005360.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005360hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eh1_A Flavohemoprotein; struc 100.0 2.5E-28 8.6E-33 250.0 20.6 168 310-496 2-181 (243)
2 1tvc_A Methane monooxygenase c 99.9 2E-27 7E-32 244.6 17.5 168 312-496 11-186 (250)
3 4fk8_A Ferredoxin--NADP reduct 99.9 7.4E-27 2.5E-31 243.3 19.0 154 310-475 18-175 (271)
4 1qfj_A Protein (flavin reducta 99.9 1.3E-26 4.5E-31 235.7 19.9 202 313-533 4-208 (232)
5 4g1v_A Flavohemoglobin; three 99.9 3.4E-26 1.2E-30 251.7 24.9 170 310-495 148-340 (399)
6 2eix_A NADH-cytochrome B5 redu 99.9 3.6E-26 1.2E-30 234.1 18.4 209 311-534 11-226 (243)
7 3lo8_A Ferredoxin--NADP reduct 99.9 1.1E-25 3.9E-30 239.2 20.5 216 312-536 29-280 (311)
8 3vo2_A Putative uncharacterize 99.9 2.1E-25 7.2E-30 237.2 22.2 215 313-536 35-279 (310)
9 2qdx_A Ferredoxin reductase; o 99.9 1.9E-25 6.4E-30 230.9 21.1 173 311-495 3-182 (257)
10 3jqq_A Ferredoxin NADP reducta 99.9 1.1E-25 3.9E-30 240.0 19.7 174 313-496 17-250 (316)
11 1gvh_A Flavohemoprotein; oxido 99.9 2E-25 6.8E-30 245.2 21.1 170 311-496 152-328 (396)
12 2pia_A Phthalate dioxygenase r 99.9 1.5E-24 5.3E-29 231.7 26.9 149 311-474 8-162 (321)
13 1fdr_A Flavodoxin reductase; f 99.9 3.2E-25 1.1E-29 227.7 19.9 206 311-534 4-221 (248)
14 1cqx_A Flavohemoprotein; globi 99.9 9.9E-25 3.4E-29 240.2 23.4 169 311-496 154-334 (403)
15 1umk_A B5R, NADH-cytochrome B5 99.9 3.7E-25 1.3E-29 230.9 16.5 208 311-532 16-255 (275)
16 1krh_A Benzoate 1,2-dioxygenas 99.9 8.8E-25 3E-29 235.0 18.0 203 312-534 109-316 (338)
17 2r6h_A NADH:ubiquinone oxidore 99.9 1.5E-24 5.2E-29 227.9 19.2 206 312-533 10-269 (290)
18 2cnd_A NADH-dependent nitrate 99.9 1.7E-24 5.7E-29 225.2 17.2 210 311-533 12-250 (270)
19 2bgi_A Ferredoxin-NADP(H) redu 99.9 4.8E-24 1.7E-28 222.4 18.7 207 312-533 17-240 (272)
20 1fnb_A Ferredoxin-NADP+ reduct 99.9 1.3E-23 4.3E-28 223.8 21.8 213 313-534 39-281 (314)
21 2bmw_A Ferredoxin--NADP reduct 99.9 2.4E-23 8.2E-28 220.5 20.8 212 313-533 23-270 (304)
22 1ep3_B Dihydroorotate dehydrog 99.9 1.7E-23 5.7E-28 217.1 19.0 193 313-532 7-204 (262)
23 2b5o_A FNR, ferredoxin--NADP r 99.9 2E-23 6.9E-28 229.7 17.8 214 312-533 123-368 (402)
24 2rc5_A Ferredoxin-NADP reducta 99.9 3.6E-23 1.2E-27 220.2 15.0 209 313-535 23-283 (314)
25 3a1f_A Cytochrome B-245 heavy 99.8 2.6E-21 8.9E-26 189.0 9.3 97 400-496 1-100 (186)
26 2gpj_A Siderophore-interacting 99.8 1.3E-17 4.5E-22 171.8 17.9 191 311-533 8-205 (252)
27 1ddg_A Sulfite reductase (NADP 99.7 4.4E-18 1.5E-22 185.2 8.7 177 338-534 145-337 (374)
28 4dql_A Bifunctional P-450/NADP 99.7 1.3E-16 4.4E-21 174.6 12.7 179 338-532 156-351 (393)
29 1f20_A Nitric-oxide synthase; 99.6 2.4E-15 8.1E-20 166.8 14.7 170 354-534 207-396 (435)
30 2qtl_A MSR;, methionine syntha 99.6 1.2E-15 4.2E-20 172.9 9.7 187 341-535 278-502 (539)
31 1tll_A Nitric-oxide synthase, 99.6 2.8E-15 9.6E-20 175.0 9.5 179 341-533 418-616 (688)
32 2bpo_A CPR, P450R, NADPH-cytoc 99.5 3.6E-15 1.2E-19 174.1 6.7 188 339-535 414-646 (682)
33 3qfs_A CPR, P450R, NADPH--cyto 99.5 7.1E-14 2.4E-18 155.3 12.7 170 354-532 231-418 (458)
34 3qe2_A CPR, P450R, NADPH--cyto 99.5 9.8E-14 3.3E-18 160.2 11.3 171 354-533 391-579 (618)
35 3lyu_A Putative hydrogenase; t 99.4 4.9E-14 1.7E-18 132.4 5.3 117 400-535 3-124 (142)
36 3lrx_A Putative hydrogenase; a 99.4 1.2E-13 4.3E-18 132.0 2.5 68 398-475 5-73 (158)
37 3lrx_A Putative hydrogenase; a 93.6 0.048 1.7E-06 51.1 4.0 30 666-695 115-145 (158)
38 1qfj_A Protein (flavin reducta 93.5 0.024 8.4E-07 56.2 1.9 35 664-698 194-231 (232)
39 3lyu_A Putative hydrogenase; t 92.5 0.077 2.6E-06 48.8 3.6 26 666-691 110-135 (142)
40 2r6h_A NADH:ubiquinone oxidore 92.0 0.071 2.4E-06 54.7 3.0 33 664-696 255-289 (290)
41 2gpj_A Siderophore-interacting 90.7 0.12 4E-06 52.3 3.0 44 653-696 178-226 (252)
42 1krh_A Benzoate 1,2-dioxygenas 89.2 0.16 5.3E-06 53.5 2.6 35 664-698 301-337 (338)
43 2bgi_A Ferredoxin-NADP(H) redu 86.4 0.43 1.5E-05 48.4 3.8 34 663-696 225-266 (272)
44 3vo2_A Putative uncharacterize 83.6 0.73 2.5E-05 47.8 4.0 38 648-685 238-283 (310)
45 3lo8_A Ferredoxin--NADP reduct 83.2 0.81 2.8E-05 47.3 4.2 38 648-685 240-284 (311)
46 2eix_A NADH-cytochrome B5 redu 82.9 0.67 2.3E-05 45.9 3.3 30 663-692 210-241 (243)
47 1ep3_B Dihydroorotate dehydrog 82.1 0.85 2.9E-05 45.9 3.8 45 650-695 177-222 (262)
48 1fdr_A Flavodoxin reductase; f 80.0 0.89 3E-05 45.2 3.0 33 663-695 205-246 (248)
49 2rc5_A Ferredoxin-NADP reducta 77.7 0.52 1.8E-05 48.9 0.4 30 667-696 269-299 (314)
50 2bmw_A Ferredoxin--NADP reduct 76.3 1.8 6.2E-05 44.4 4.1 37 648-684 232-276 (304)
51 2b5o_A FNR, ferredoxin--NADP r 75.5 2 6.9E-05 46.3 4.4 38 648-685 330-375 (402)
52 1fnb_A Ferredoxin-NADP+ reduct 75.4 2 6.9E-05 44.4 4.2 38 648-685 242-287 (314)
53 1umk_A B5R, NADH-cytochrome B5 65.8 1.9 6.7E-05 43.4 1.4 25 664-688 242-267 (275)
54 2cnd_A NADH-dependent nitrate 62.7 2.5 8.6E-05 42.4 1.6 30 664-693 236-268 (270)
55 1tll_A Nitric-oxide synthase, 60.7 3 0.0001 48.4 1.9 39 313-351 253-298 (688)
56 1f20_A Nitric-oxide synthase; 55.1 4.6 0.00016 44.0 2.1 39 313-351 32-77 (435)
57 1ddg_A Sulfite reductase (NADP 45.0 8.8 0.0003 40.8 2.3 38 314-351 14-57 (374)
58 3s2u_A UDP-N-acetylglucosamine 36.1 26 0.00088 36.7 4.2 25 417-441 3-29 (365)
59 4dql_A Bifunctional P-450/NADP 33.2 16 0.00055 39.1 2.0 38 314-351 9-51 (393)
60 2qtl_A MSR;, methionine syntha 30.9 19 0.00064 40.3 2.1 38 314-351 117-160 (539)
61 2bpo_A CPR, P450R, NADPH-cytoc 28.8 22 0.00076 40.9 2.3 38 314-351 262-304 (682)
62 3qfs_A CPR, P450R, NADPH--cyto 27.2 22 0.00075 38.9 1.8 38 314-351 65-107 (458)
63 3qe2_A CPR, P450R, NADPH--cyto 25.9 23 0.0008 40.2 1.8 38 314-351 225-267 (618)
No 1
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.96 E-value=2.5e-28 Score=249.99 Aligned_cols=168 Identities=15% Similarity=0.195 Sum_probs=140.0
Q ss_pred cccceEEEEEEEecCCeEEEEEeCCC---CcccCCCcEEEEEeCCCCC--ceeeeeEeecCCCCCCCeEEEEEEeC----
Q 005360 310 SRNRARLLSARALPCGVVELNFSKSP---GLYYNPTSILFVNVPSISK--LQWHPFTVTSNCNMEQDKLSILVKTE---- 380 (700)
Q Consensus 310 ~~~~~~vvs~~~l~~~~~~l~~~~~~---~~~~~pGq~v~L~~p~~s~--~q~HPFTIas~p~~~~~~l~l~IK~~---- 380 (700)
.++.+++++++.+++++.+++++.++ ...++||||++|++|..+. .++|||||+|.|. ++.++|.||..
T Consensus 2 ~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~--~~~~~i~vk~~~~~~ 79 (243)
T 4eh1_A 2 DGRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASN--GREYRISVKREGVGS 79 (243)
T ss_dssp CCEEEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEEEECCSSCSSCEEEEEEBCSCCC--SSCEEEEEECTTTTS
T ss_pred CcEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCcCCCCEEEEEEecCCCccccceeeEeccCCC--CCeEEEEEEEeecCC
Confidence 35678999999999999999998754 2579999999999986442 3789999999874 47899999998
Q ss_pred ---CCchHHHHhhhccCCCceEEEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEE
Q 005360 381 ---GSWTQKLYQQISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLIC 457 (700)
Q Consensus 381 ---Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw 457 (700)
|.+|++|++.++. ++++.++||||.+..+ ..+++++|||||+||||++++++++.++.. .+ ++|+|
T Consensus 80 ~~~G~~S~~l~~~l~~---G~~v~v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~~~------~~-v~l~~ 148 (243)
T 4eh1_A 80 DNPGLVSHYLHNNVKV---GDSVKLYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQNK------SG-VTYLY 148 (243)
T ss_dssp SSCCHHHHHHHHHCCT---TCEEEEEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHTTC------CS-EEEEE
T ss_pred CCCCeehhHHHhcCCC---CCEEEEEccCcccCcC-CCCCCEEEEEccccHHHHHHHHHHHHHcCC------Ce-EEEEE
Confidence 8899999865443 3789999999998764 678899999999999999999999987532 34 99999
Q ss_pred EECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCC
Q 005360 458 VFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDS 496 (700)
Q Consensus 458 ~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~ 496 (700)
++|+.+++.+.+++.++.. +. +++++++++++.
T Consensus 149 ~~r~~~~~~~~~el~~l~~-----~~-~~~~~~~~s~~~ 181 (243)
T 4eh1_A 149 ACNSAKEHTFAQETAQLIA-----QQ-GWMQQVWYRDES 181 (243)
T ss_dssp EESSGGGCTTHHHHHHHHH-----HH-TCEEEEEESSCC
T ss_pred EeCChhhhhHHHHHHHHHH-----hC-CeEEEEEEccCC
Confidence 9999999999999976642 22 788888888765
No 2
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.95 E-value=2e-27 Score=244.65 Aligned_cols=168 Identities=18% Similarity=0.292 Sum_probs=138.8
Q ss_pred cceEEEEEEEecCCeEEEEEeC-C-C----CcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC--CCc
Q 005360 312 NRARLLSARALPCGVVELNFSK-S-P----GLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE--GSW 383 (700)
Q Consensus 312 ~~~~vvs~~~l~~~~~~l~~~~-~-~----~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~ 383 (700)
..+++++++.+++++.+++++. + + ...++||||+.|++|+ ..++|||||+|.|. +++.++|.||.. |.+
T Consensus 11 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~--~~~~R~ySi~s~~~-~~~~l~i~vk~~~~G~~ 87 (250)
T 1tvc_A 11 FEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPG--TDVSRSYSPANLPN-PEGRLEFLIRVLPEGRF 87 (250)
T ss_dssp EEEEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTS--CSSSEEECCBCCSS-SSCCEEEEECCCTTSSS
T ss_pred EEEEEEEEEEcCCCeEEEEEEecCCCCcccccCcCCCcEEEEEeCC--CccccccccCCCCC-CCCeEEEEEEECCCCCc
Confidence 3567888888999999999987 6 4 4679999999999985 35889999999985 467899999997 999
Q ss_pred hHHHHhhhccCCCceEEEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCC
Q 005360 384 TQKLYQQISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSA 463 (700)
Q Consensus 384 T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~ 463 (700)
|++|++.++. ++++.++||||.+......+++++|||||+||||++++++++.++.. .++++|+|++|+.+
T Consensus 88 s~~l~~~l~~---Gd~v~v~gP~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~------~~~v~l~~~~r~~~ 158 (250)
T 1tvc_A 88 SDYLRNDARV---GQVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWTA------PNETRIYFGVNTEP 158 (250)
T ss_dssp HHHHHHHSSS---SSEEEEEEEECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHHTC------CSCEEEEEECSSST
T ss_pred hHHHHhcCCC---CCEEEEEcCccccccCccCCceEEEEEeccCHHHHHHHHHHHHhcCC------CceEEEEEEeCCHH
Confidence 9999854443 36899999999987644446899999999999999999999987632 46899999999999
Q ss_pred chhhHHHhcccCCCCcccCCCceEEEEEEeCCC
Q 005360 464 DLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDS 496 (700)
Q Consensus 464 ~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~ 496 (700)
++.+.++|.++.. +..+++++.++|+++
T Consensus 159 ~~~~~~el~~l~~-----~~~~~~~~~~~s~~~ 186 (250)
T 1tvc_A 159 ELFYIDELKSLER-----SMRNLTVKACVWHPS 186 (250)
T ss_dssp TCCCHHHHHHHHH-----HSSSCEEEECCSSCS
T ss_pred HhhhHHHHHHHHH-----hCCCeEEEEEeccCC
Confidence 9999898876542 235688888888764
No 3
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.95 E-value=7.4e-27 Score=243.35 Aligned_cols=154 Identities=19% Similarity=0.269 Sum_probs=132.8
Q ss_pred cccceEEEEEEEecCCeEEEEEeCCCCcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC--CCchHHH
Q 005360 310 SRNRARLLSARALPCGVVELNFSKSPGLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE--GSWTQKL 387 (700)
Q Consensus 310 ~~~~~~vvs~~~l~~~~~~l~~~~~~~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~~L 387 (700)
.+..+++++++.+++++.+++++.+..+.++||||++|++|..+..++|||||+|.|. ++.+++.||.. |.+|+.|
T Consensus 18 ~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~--~~~~~~~v~~~~~G~~s~~l 95 (271)
T 4fk8_A 18 KFDTATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNY--EEHLEFFSIKVQNGPLTSRL 95 (271)
T ss_dssp CEEEEEEEEEEEEETTEEEEEECCCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSSEEEEEECCTTCTTHHHH
T ss_pred cceeEEEEEEEEcCCCEEEEEEEcCCCCCcCCCCEEEEEccCCCceeeeeEeccCCCC--CCcEEEEEEEECCCchhhHH
Confidence 3566789999999999999999988778899999999999976677899999999874 56799999986 9999999
Q ss_pred HhhhccCCCceEEEEE-ccCCCCCCCC-CCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCch
Q 005360 388 YQQISSSVDRLEVSVE-GPYGPNSAHF-LRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADL 465 (700)
Q Consensus 388 ~~~~~~~~~~~~v~Ve-GPyG~~~~~~-~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l 465 (700)
.+...+ +++.++ ||||++.... ..+++++|||||+||||++++++++.++.. .++++|+|++|+.+++
T Consensus 96 ~~l~~G----d~v~v~~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~------~~~v~l~~~~r~~~~~ 165 (271)
T 4fk8_A 96 QHLKVG----DPVLIGKKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYER------FDKVVLTHTCRLKGEL 165 (271)
T ss_dssp TTCCTT----CEEEEESCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHH------CSEEEEEECCCSHHHH
T ss_pred hcCCCC----CEEEEecCCCcceecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcCC------CCCEEEEEecCCHHHH
Confidence 765444 689999 9999987533 368999999999999999999999876532 4699999999999999
Q ss_pred hhHHHhcccC
Q 005360 466 SMLNIMLPVS 475 (700)
Q Consensus 466 ~~~d~L~~~~ 475 (700)
.+.+++.++.
T Consensus 166 ~~~~el~~l~ 175 (271)
T 4fk8_A 166 AYMDYIKHDL 175 (271)
T ss_dssp HHHHHHHTCC
T ss_pred hHHHHHHHHH
Confidence 9999998765
No 4
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.94 E-value=1.3e-26 Score=235.69 Aligned_cols=202 Identities=14% Similarity=0.147 Sum_probs=155.7
Q ss_pred ceEEEEEEEecCCeEEEEEeCCCCcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC--CCchHHHHhh
Q 005360 313 RARLLSARALPCGVVELNFSKSPGLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE--GSWTQKLYQQ 390 (700)
Q Consensus 313 ~~~vvs~~~l~~~~~~l~~~~~~~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~~L~~~ 390 (700)
.+++++++.+++++.+++++.+..+.++||||+.|++|. .++|||||+|.|. +++.+++.||.. |++|+++.+.
T Consensus 4 ~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~---~~~R~ySi~s~~~-~~~~l~l~i~~~~~G~~s~~~~~~ 79 (232)
T 1qfj_A 4 SCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDE---RDKRPFSMASTPD-EKGFIELHIGASEINLYAKAVMDR 79 (232)
T ss_dssp EEEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSS---SCEEEEECCSCTT-STTCEEEEEC------CCHHHHHH
T ss_pred EEEEEEEEecCCCEEEEEEecCCCCCcCCCCEEEEECCC---CceeeeecCCCCC-CCCcEEEEEEEccCCchhHHHHHh
Confidence 468899999999999999987777789999999999985 5889999999985 457899999995 4678876665
Q ss_pred hccCCCceEEEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchhhHHH
Q 005360 391 ISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLSMLNI 470 (700)
Q Consensus 391 ~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~~~d~ 470 (700)
++. ++++.++||||.+......+++++|||||+||||++++++++.++.. .++++|+|++|+.+++.+.++
T Consensus 80 l~~---Gd~v~v~gP~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~------~~~v~l~~~~r~~~~~~~~~e 150 (232)
T 1qfj_A 80 ILK---DHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARNP------NRDITIYWGGREEQHLYDLCE 150 (232)
T ss_dssp HHH---HSEEEEEEEECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHHCT------TCCEEEEEEESSGGGCTTHHH
T ss_pred CCC---CCEEEEeCCccceEeCCCCCCcEEEEEecccHhHHHHHHHHHHhcCC------CCcEEEEEeeCCHHHhhhHHH
Confidence 544 37899999999987644457899999999999999999999987632 568999999999999999999
Q ss_pred hcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhhhcc-CCCCCCCCeEeEeCCcchHHH
Q 005360 471 MLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQSIWF-KSNPSDSPVSGALGCNSWLWL 533 (700)
Q Consensus 471 L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~vcGp~~~~~~ 533 (700)
|.++.. +..+++++..++++++++....+.+.+.+.. .+. .+...+.+|||++|+..
T Consensus 151 l~~l~~-----~~~~~~~~~~~s~~~~~~~g~~g~v~~~~~~~~~~-~~~~~vyvCGp~~m~~~ 208 (232)
T 1qfj_A 151 LEALSL-----KHPGLQVVPVVEQPEAGWRGRTGTVLTAVLQDHGT-LAEHDIYIAGRFEMAKI 208 (232)
T ss_dssp HHHHHH-----HCTTEEEEEEESSCCTTCCSEESCHHHHHHHHCSC-CTTCEEEEESCHHHHHH
T ss_pred HHHHHH-----HCCCeEEEEEEcCCCCCcCCceeeHHHHHHHhcCC-ccccEEEEECCHHHHHH
Confidence 876542 3457999989998765554433322222211 111 23567899999998854
No 5
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.94 E-value=3.4e-26 Score=251.67 Aligned_cols=170 Identities=14% Similarity=0.159 Sum_probs=139.1
Q ss_pred cccceEEEEEEEecCCeEEEEEeCCC--Cc-----ccCCCcEEEEEeCC----CCCceeeeeEeecCCCCCCCeEEEEEE
Q 005360 310 SRNRARLLSARALPCGVVELNFSKSP--GL-----YYNPTSILFVNVPS----ISKLQWHPFTVTSNCNMEQDKLSILVK 378 (700)
Q Consensus 310 ~~~~~~vvs~~~l~~~~~~l~~~~~~--~~-----~~~pGq~v~L~~p~----~s~~q~HPFTIas~p~~~~~~l~l~IK 378 (700)
.++.+++++++.+++++.++++..++ .+ .++||||+.|+++. ....++|||||++.|+ ++.++|.||
T Consensus 148 ~~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~l~~~~~~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~--~~~~~i~Vk 225 (399)
T 4g1v_A 148 GWKPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQENQYDALRHYSLCSAST--KNGLRFAVK 225 (399)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEEECTTSCCCGGGCCCCTTCEEEEEECCCSTTCCSCEEEEEEBSCSCC--TTCEEEEEE
T ss_pred cceEEEEEEEEEcCCCeEEEEEEcCCCCcCCcCCCCCCCCCEEEEEEeCCCCCCccceeeeecccCCCC--CCeEEEEEE
Confidence 45678999999999999999998764 23 79999999999753 3346899999999984 578999999
Q ss_pred e--------CCCchHHHHhhhccCCCceEEEEEccCCCCCCCCC----CCCeEEEEEcCCChhhHHHHHHHHHHhcCCCC
Q 005360 379 T--------EGSWTQKLYQQISSSVDRLEVSVEGPYGPNSAHFL----RHESLVMVSGGSGISPFISIVRELIFQSNNNP 446 (700)
Q Consensus 379 ~--------~Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~~----~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~ 446 (700)
. .|.+|++|++.++. ++++.++||||.+..+.. ..++++|||||+||||++++++++.++..
T Consensus 226 ~~~~~~~~~~G~~S~~L~~~l~~---Gd~v~v~gP~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~~~--- 299 (399)
T 4g1v_A 226 MEAARENFPAGLVSEYLHKDAKV---GDEIKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKCNP--- 299 (399)
T ss_dssp CCCCBTTBCCCHHHHHHHHTCCT---TCEEEEEEEECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHHCT---
T ss_pred eccCCCCCCCCEehhHHHhCCCC---CCEEEEEecccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHcCC---
Confidence 8 56799999865544 378999999999765433 47899999999999999999999987643
Q ss_pred CCCCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCC
Q 005360 447 DYKIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRD 495 (700)
Q Consensus 447 ~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~ 495 (700)
.++++|+|++|+.+++.+.+++.++.. +..+++++++++++
T Consensus 300 ---~~~v~l~~~~r~~~~~~~~~el~~l~~-----~~~~~~~~~~~s~~ 340 (399)
T 4g1v_A 300 ---NRPIYWIQSSYDEKTQAFKKHVDELLA-----ECANVDKIIVHTDT 340 (399)
T ss_dssp ---TSCEEEEEEESSSTTSTTHHHHHHHHT-----TCSSEEEEEEETTT
T ss_pred ---CCCEEEEEecCCHHHhhhHHHHHHHHH-----hCCCcEEEEEEeCC
Confidence 578999999999999999999887653 34567777777654
No 6
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.94 E-value=3.6e-26 Score=234.09 Aligned_cols=209 Identities=15% Similarity=0.116 Sum_probs=160.8
Q ss_pred ccceEEEEEEEecCCeEEEEEeCCC---CcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC--CCchH
Q 005360 311 RNRARLLSARALPCGVVELNFSKSP---GLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE--GSWTQ 385 (700)
Q Consensus 311 ~~~~~vvs~~~l~~~~~~l~~~~~~---~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~ 385 (700)
++.+++++++.+++++.++++..++ ...++||||+.|++|..+..++||||++|.+. +++.++|.||.. |.+|+
T Consensus 11 ~~~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~-~~~~~~l~vk~~~~G~~S~ 89 (243)
T 2eix_A 11 YKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPVSSDD-EKGYFDLIIKVYEKGQMSQ 89 (243)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTT-CCSEEEEEEECCTTCHHHH
T ss_pred eEEEEEEEEEEeCCCeEEEEEEcCCCCcccCcCCceEEEEEEeeCCCEEEeeeeecCCCC-CCCEEEEEEEEcCCCCcch
Confidence 4567899999999999998888654 35799999999999865567899999999875 568999999996 88999
Q ss_pred HHHhhhccCCCceEEEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCch
Q 005360 386 KLYQQISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADL 465 (700)
Q Consensus 386 ~L~~~~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l 465 (700)
.|.++..+ +++.++||||++..+....++++|||||+||||++++++++.++.+ ..++++|+|++|+.+|+
T Consensus 90 ~l~~l~~G----d~v~v~gP~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~-----~~~~v~l~~~~r~~~~~ 160 (243)
T 2eix_A 90 YIDHLNPG----DFLQVRGPKGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKNPK-----EKTIINLIFANVNEDDI 160 (243)
T ss_dssp HHHTCCTT----CEEEEEEEECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCTT-----CCCEEEEEEEEEEGGGC
T ss_pred HhhcCCCC----CEEEEECCeEEEEeCCCCCcEEEEEecCccHHHHHHHHHHHHhCCC-----CCcEEEEEEEcCCHHHh
Confidence 99765444 6899999999975433457899999999999999999999976421 25789999999999999
Q ss_pred hhHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhh-hhc-cCCCCCCCCeEeEeCCcchHHHH
Q 005360 466 SMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQ-SIW-FKSNPSDSPVSGALGCNSWLWLA 534 (700)
Q Consensus 466 ~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~-~~~-~~p~~~~~~~~~vcGp~~~~~~~ 534 (700)
.+.++|.++.. +..+++++..++++++++....+.+.+ .+. ..+.+.++..+.+|||++|+...
T Consensus 161 ~~~~el~~l~~-----~~~~~~~~~~~s~~~~~~~g~~g~v~~~~l~~~~~~~~~~~~vy~CGp~~m~~~v 226 (243)
T 2eix_A 161 LLRTELDDMAK-----KYSNFKVYYVLNNPPAGWTGGVGFVSADMIKQHFSPPSSDIKVMMCGPPMMNKAM 226 (243)
T ss_dssp TTHHHHHHHHH-----HCTTEEEEEEEEECCTTCCSEESSCCHHHHHHHSCCTTSSEEEEEESSHHHHHHH
T ss_pred hHHHHHHHHHH-----HCCCeEEEEEeCCCCccccCcCCccCHHHHHHhcCCCCCCeEEEEECCHHHHHHH
Confidence 99999876542 234789999999876554433332221 111 12333345678999999998543
No 7
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.94 E-value=1.1e-25 Score=239.22 Aligned_cols=216 Identities=12% Similarity=0.056 Sum_probs=159.9
Q ss_pred cceEEEEEEEec-----CCeEEEEEeCCCCcccCCCcEEEEEeCCCC------CceeeeeEeecCCCC---CCCeEEEEE
Q 005360 312 NRARLLSARALP-----CGVVELNFSKSPGLYYNPTSILFVNVPSIS------KLQWHPFTVTSNCNM---EQDKLSILV 377 (700)
Q Consensus 312 ~~~~vvs~~~l~-----~~~~~l~~~~~~~~~~~pGq~v~L~~p~~s------~~q~HPFTIas~p~~---~~~~l~l~I 377 (700)
..+++++++.++ +++++++++.+..+.++||||++|++|..+ ..++|||||+|+|.+ +++.++|+|
T Consensus 29 ~~~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~V 108 (311)
T 3lo8_A 29 FTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCV 108 (311)
T ss_dssp EEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEE
T ss_pred eEEEEEeeEeccCCCCCCccEEEEEeCCCCCcccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEE
Confidence 457899999999 899999999887789999999999999752 258999999999853 247899999
Q ss_pred EeC---------------CCchHHHHhhhccCCCceEEEEEccCCCCCCCC--CCCCeEEEEEcCCChhhHHHHHHHHHH
Q 005360 378 KTE---------------GSWTQKLYQQISSSVDRLEVSVEGPYGPNSAHF--LRHESLVMVSGGSGISPFISIVRELIF 440 (700)
Q Consensus 378 K~~---------------Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~--~~~~~vvlIAGG~GITp~lsil~~l~~ 440 (700)
|.. |.+|+.|+++..+ .++.++||||.+.... ..+++++|||||+||||+++++++++.
T Consensus 109 k~~~~~~~~~~~~~~~~~G~~S~~L~~l~~G----d~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~ 184 (311)
T 3lo8_A 109 RRAVYYDPETGKEDPSKNGVCSNFLCNSKPG----DKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFM 184 (311)
T ss_dssp ECCCCCCTTTCCCCGGGSCHHHHHHHTCCTT----CEEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHT
T ss_pred EEEEecccccCcCCcCCCCchhhHHhcCCCc----CEEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHH
Confidence 964 8899999985443 6899999999986422 367899999999999999999999986
Q ss_pred hcCCCCCCCCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhhhccC-----CC
Q 005360 441 QSNNNPDYKIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQSIWFK-----SN 515 (700)
Q Consensus 441 ~~~~~~~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~~-----p~ 515 (700)
+.. +.....++++|+|++|+.+++.+.++|.++.. ....+++++.++|++++++....+...+.+... +.
T Consensus 185 ~~~-~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~~----~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~ 259 (311)
T 3lo8_A 185 EDV-PNYRFGGLAWLFLGVANSDSLLYDEEFTSYLK----QYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKL 259 (311)
T ss_dssp EEC-TTCCCCSEEEEEEEESSGGGCSSHHHHHHHHH----HCTTTEEEEEEETTTC-------CCHHHHHHHTHHHHHHH
T ss_pred hcc-ccccCCCCEEEEEecCChHHhhHHHHHHHHHH----hCCCcEEEEEEECCCCcccCCCcceehHHHHHHHHHHHHh
Confidence 543 11112368999999999999999999987642 122479999999998654432222111111100 00
Q ss_pred CCCCCeEeEeCCcchHHHHHH
Q 005360 516 PSDSPVSGALGCNSWLWLAVV 536 (700)
Q Consensus 516 ~~~~~~~~vcGp~~~~~~~~~ 536 (700)
..+...+.+|||++|+--..-
T Consensus 260 ~~~~~~vyvCGp~~m~~~v~~ 280 (311)
T 3lo8_A 260 LDGGAHIYFCGLKGMMPGIQD 280 (311)
T ss_dssp HHTTCEEEEEECGGGHHHHHH
T ss_pred hcCCcEEEEECCHHHHHHHHH
Confidence 124568899999999865443
No 8
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.93 E-value=2.1e-25 Score=237.18 Aligned_cols=215 Identities=14% Similarity=0.140 Sum_probs=161.6
Q ss_pred ceEEEEEEEecCC-----eEEEEEeCCCCcccCCCcEEEEEeCCCC----CceeeeeEeecCCCC---CCCeEEEEEEeC
Q 005360 313 RARLLSARALPCG-----VVELNFSKSPGLYYNPTSILFVNVPSIS----KLQWHPFTVTSNCNM---EQDKLSILVKTE 380 (700)
Q Consensus 313 ~~~vvs~~~l~~~-----~~~l~~~~~~~~~~~pGq~v~L~~p~~s----~~q~HPFTIas~p~~---~~~~l~l~IK~~ 380 (700)
.+++++++.++++ +.+++++.+..+.+.||||++|++|..+ ..++|||||+|+|.. +++.++|.||..
T Consensus 35 ~~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~ 114 (310)
T 3vo2_A 35 VGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRL 114 (310)
T ss_dssp EEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEECC
T ss_pred EEEEEEEEEccCCCCCccEEEEEEeCCCCCcccCCCEEEEECCCcCCCCCcCcceeeecCCCCcccCCCCCEEEEEEEEE
Confidence 4688899999887 9999999877788999999999998643 247899999999852 367899999985
Q ss_pred -----------CCchHHHHhhhccCCCceEEEEEccCCCCCC-CCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCC
Q 005360 381 -----------GSWTQKLYQQISSSVDRLEVSVEGPYGPNSA-HFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDY 448 (700)
Q Consensus 381 -----------Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~-~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~ 448 (700)
|.+|+.|+++..+ +++.++||||.+.. +....++++|||||+||||+++++++++.+.. ....
T Consensus 115 ~~~~~~~~~~~G~~S~~L~~l~~G----d~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~-~~~~ 189 (310)
T 3vo2_A 115 VYTNDQGEIVKGVCSNFLCDLKPG----ADVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEH-EDYK 189 (310)
T ss_dssp EEECTTSCEEECHHHHHHHTCCTT----CEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCC-TTCC
T ss_pred EeccCCCCcCCcchhhHHhcCCCC----CEEEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhc-cccc
Confidence 8899999985444 68999999998753 23467899999999999999999999986532 1112
Q ss_pred CCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhhhccC-----C-CCCCCCeE
Q 005360 449 KIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQSIWFK-----S-NPSDSPVS 522 (700)
Q Consensus 449 ~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~~-----p-~~~~~~~~ 522 (700)
..++++|+|++|+.+++.+.++|.++.. ....++++++++|++++++....+.....+... + ...+...+
T Consensus 190 ~~~~v~L~~g~r~~~d~~~~~el~~l~~----~~~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~v 265 (310)
T 3vo2_A 190 FSGLAWLFLGVPTSDSLLYKEELEKMKE----MAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYV 265 (310)
T ss_dssp CCSEEEEEEEESSGGGCCSHHHHHHHHH----HCTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTEEE
T ss_pred CCCcEEEEEEecChhhcccHHHHHHHHH----hCCCCEEEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcccCCcEE
Confidence 2478999999999999999999987652 122479999999998655443222211111110 0 01246788
Q ss_pred eEeCCcchHHHHHH
Q 005360 523 GALGCNSWLWLAVV 536 (700)
Q Consensus 523 ~vcGp~~~~~~~~~ 536 (700)
.+|||++|+.-..-
T Consensus 266 yvCGp~~M~~~v~~ 279 (310)
T 3vo2_A 266 YMCGLKGMEKGIDD 279 (310)
T ss_dssp EEEESTTHHHHHHH
T ss_pred EEeCCHHHHHHHHH
Confidence 99999999865433
No 9
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.93 E-value=1.9e-25 Score=230.88 Aligned_cols=173 Identities=18% Similarity=0.273 Sum_probs=139.2
Q ss_pred ccceEEEEEEEecCCeEEEEEeCCCCcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC--CCchHHHH
Q 005360 311 RNRARLLSARALPCGVVELNFSKSPGLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE--GSWTQKLY 388 (700)
Q Consensus 311 ~~~~~vvs~~~l~~~~~~l~~~~~~~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~~L~ 388 (700)
+..+++++++.+++++.+++++.++.+.++||||+.|++|..+..++|||||+|.|. ++.++++||.. |.+|++|.
T Consensus 3 ~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~--~~~~~~~i~~~~~G~~s~~l~ 80 (257)
T 2qdx_A 3 LYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNY--EEHLEFFSIKVPDGPLTSRLQ 80 (257)
T ss_dssp SEEEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTT--SSEEEEEEECCTTCTTHHHHT
T ss_pred eEEEEEEEEEEcCCCeEEEEEeCCCCCccCCCCEEEEEecCCCCceeeeeEeecCCC--CCeEEEEEEEeCCCcchhHHH
Confidence 456789999999999999999987778899999999999865667899999999884 47899999986 88999997
Q ss_pred hhhccCCCceEEEEE-ccCCCCCCCCC-CCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchh
Q 005360 389 QQISSSVDRLEVSVE-GPYGPNSAHFL-RHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLS 466 (700)
Q Consensus 389 ~~~~~~~~~~~v~Ve-GPyG~~~~~~~-~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~ 466 (700)
++..+ +++.+. ||||.+..+.. ..++++|||||+||||++++++++..+.. .++++|+|++|+.+++.
T Consensus 81 ~l~~G----d~v~v~~gp~G~f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~------~~~v~l~~~~r~~~~~~ 150 (257)
T 2qdx_A 81 HLKEG----DELMVSRKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYER------YEKVILVHGVRWVSELA 150 (257)
T ss_dssp TCCTT----CEEEECSCCBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHHH------CSEEEEEEEESSGGGCT
T ss_pred hCCCC----CEEEEecCCCCCccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcCC------CCeEEEEEEcCCHHHhH
Confidence 64443 678999 99999764322 37899999999999999999999876532 46899999999999999
Q ss_pred hHHHhc-ccCCCCcc-cC-CCceEEEEEEeCC
Q 005360 467 MLNIML-PVSDAPTE-LS-KLQLQIEAYVTRD 495 (700)
Q Consensus 467 ~~d~L~-~~~~~~~~-l~-~~~l~i~iyvTr~ 495 (700)
+.++|. ++...+.. .. ..+++++..+|++
T Consensus 151 ~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~ 182 (257)
T 2qdx_A 151 YADFITKVLPEHEYFGDQVKEKLIYYPLVTRE 182 (257)
T ss_dssp THHHHHTTGGGCTTTHHHHHHHEEEEEEESSS
T ss_pred hHHHHHHHHHhchhhhccCCCcEEEEEEecCC
Confidence 999987 55310000 00 2468888888876
No 10
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.93 E-value=1.1e-25 Score=239.97 Aligned_cols=174 Identities=14% Similarity=0.167 Sum_probs=139.2
Q ss_pred ceEEEEEEEec-----CCeEEEEEeCCCCcccCCCcEEEEEeCCCC----------------------------------
Q 005360 313 RARLLSARALP-----CGVVELNFSKSPGLYYNPTSILFVNVPSIS---------------------------------- 353 (700)
Q Consensus 313 ~~~vvs~~~l~-----~~~~~l~~~~~~~~~~~pGq~v~L~~p~~s---------------------------------- 353 (700)
.+++++++.+. +++.++++..+..++|.||||+.|..|+.+
T Consensus 17 ~~~v~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~GQ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~g 96 (316)
T 3jqq_A 17 KCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELDNNPNNQINKDHNIINTTNHTNHNNIALSHIKK 96 (316)
T ss_dssp EEEEEEEEECSCTTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC-----------------------------------
T ss_pred EEEEEeeEEccCCCCCCceEEEEEeCCCCcceecCcEeEEECCCcccccccccccccccccccccccccccccccccCCC
Confidence 46888888886 889999999988899999999999998753
Q ss_pred CceeeeeEeecCCCCCCCeEEEEEEeC--------------CCchHHHHhhhccCCCceEEEEEccCCCCCCCCC---CC
Q 005360 354 KLQWHPFTVTSNCNMEQDKLSILVKTE--------------GSWTQKLYQQISSSVDRLEVSVEGPYGPNSAHFL---RH 416 (700)
Q Consensus 354 ~~q~HPFTIas~p~~~~~~l~l~IK~~--------------Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~~---~~ 416 (700)
..++|||||+|+|. ++.++|+||+. |.+|+.|.++..+ .++.|+||||.+..+.. ..
T Consensus 97 ~~~~R~ySIaS~p~--~~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~G----d~v~v~gP~G~f~l~~~~~~~~ 170 (316)
T 3jqq_A 97 QRCARLYSISSSNN--MENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKIN----DDIYLTGAHGYFNLPNDAIQKN 170 (316)
T ss_dssp CCCCEEEEBCSCTT--SSSEEEEEECCBC---------CCBCHHHHHHHTCCTT----CEEEEEEEECCCCCCTTHHHHT
T ss_pred cccceeeecccCCC--CCeEEEEEEEEEecccccccCcCCCCchhHHHhhCCCC----CEEEEEecCCceEcCCcccCCC
Confidence 36899999999985 36899999974 8899999665444 67999999999754332 26
Q ss_pred CeEEEEEcCCChhhHHHHHHHHHHhcCC----CCCCCCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEE
Q 005360 417 ESLVMVSGGSGISPFISIVRELIFQSNN----NPDYKIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYV 492 (700)
Q Consensus 417 ~~vvlIAGG~GITp~lsil~~l~~~~~~----~~~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyv 492 (700)
++++|||||+||||++|+++++.++... ......++++|+|++|+.+++.+.++|.++.. ....+++++.++
T Consensus 171 ~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~----~~~~~~~~~~~~ 246 (316)
T 3jqq_A 171 TNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYFQK----MYPNNINIHYVF 246 (316)
T ss_dssp CCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGCTTHHHHHHHHH----HCTTTEEEEEEE
T ss_pred CcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHHHhhcHHHHHHHHH----hCCCcEEEEEEE
Confidence 8999999999999999999999865310 01123578999999999999999999986642 122478999999
Q ss_pred eCCC
Q 005360 493 TRDS 496 (700)
Q Consensus 493 Tr~~ 496 (700)
|+++
T Consensus 247 s~~~ 250 (316)
T 3jqq_A 247 SYKQ 250 (316)
T ss_dssp GGGC
T ss_pred CCCc
Confidence 9874
No 11
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.93 E-value=2e-25 Score=245.24 Aligned_cols=170 Identities=14% Similarity=0.197 Sum_probs=141.1
Q ss_pred ccceEEEEEEEecCCeEEEEEeCCCC---cccCCCcEEEEEeCCCC--CceeeeeEeecCCCCCCCeEEEEEEeC--CCc
Q 005360 311 RNRARLLSARALPCGVVELNFSKSPG---LYYNPTSILFVNVPSIS--KLQWHPFTVTSNCNMEQDKLSILVKTE--GSW 383 (700)
Q Consensus 311 ~~~~~vvs~~~l~~~~~~l~~~~~~~---~~~~pGq~v~L~~p~~s--~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~ 383 (700)
++.+++++++.+++++.+++++.+++ ..++||||+.|++|..+ ..++|||||+|.|. ++.++|.||.. |.+
T Consensus 152 ~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~G~~ 229 (396)
T 1gvh_A 152 TRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKREEGGQV 229 (396)
T ss_dssp EEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEECCTTCHH
T ss_pred cEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEEcCCCcc
Confidence 45789999999999999999987642 47999999999998433 36899999999884 56899999997 889
Q ss_pred hHHHHhhhccCCCceEEEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCC
Q 005360 384 TQKLYQQISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSA 463 (700)
Q Consensus 384 T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~ 463 (700)
|++|++.++. ++++.+.||+|.+..+....++++|||||+||||++++++++.++.. .++++|+|++|+.+
T Consensus 230 S~~L~~~l~~---Gd~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~~------~~~v~l~~~~r~~~ 300 (396)
T 1gvh_A 230 SNWLHNHANV---GDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGH------TAQVNWFHAAENGD 300 (396)
T ss_dssp HHHHHHTCCT---TCEEEEEEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHTC------CSCEEEEEEESCTT
T ss_pred hHHHHhcCCC---CCEEEEEcCCcceECCCCCCCCEEEEecchhHhHHHHHHHHHHhcCC------CCcEEEEEEeCCHH
Confidence 9999985443 37899999999875433457899999999999999999999987632 57899999999999
Q ss_pred chhhHHHhcccCCCCcccCCCceEEEEEEeCCC
Q 005360 464 DLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDS 496 (700)
Q Consensus 464 ~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~ 496 (700)
++.+.+++.++.. +..++++++++++++
T Consensus 301 ~~~~~~el~~l~~-----~~~~~~~~~~~s~~~ 328 (396)
T 1gvh_A 301 VHAFADEVKELGQ-----SLPRFTAHTWYRQPS 328 (396)
T ss_dssp TCCSHHHHHHHHH-----TSSSEEEEEEESSCC
T ss_pred HhhhHHHHHHHHH-----HCCCeEEEEEECCCC
Confidence 9999998876642 345788888888764
No 12
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.93 E-value=1.5e-24 Score=231.67 Aligned_cols=149 Identities=19% Similarity=0.338 Sum_probs=125.7
Q ss_pred ccceEEEEEEEecCCeEEEEEeCCCC---cccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC--CC-ch
Q 005360 311 RNRARLLSARALPCGVVELNFSKSPG---LYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE--GS-WT 384 (700)
Q Consensus 311 ~~~~~vvs~~~l~~~~~~l~~~~~~~---~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg-~T 384 (700)
+..+++++++.+++++.++++..++. ..++||||+.|++|. + ++|||||+|.|. +++.++|.||.. |. +|
T Consensus 8 ~~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~-g--~~R~ySi~s~~~-~~~~l~i~Vk~~~~G~g~S 83 (321)
T 2pia_A 8 FLRLKIASKEKIARDIWSFELTDPQGAPLPPFEAGANLTVAVPN-G--SRRTYSLCNDSQ-ERNRYVIAVKRDSNGRGGS 83 (321)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECTTCCCCCCCCTTCEEEEECTT-S--CEEEEECCSCTT-CCSEEEEEEECCTTSCSHH
T ss_pred cEEEEEEEEEEcCCCEEEEEEEcCCCCcCCCCCCCCEEEEECCC-C--CcEEEEeCCCCC-CCCeEEEEEEEecCCcchh
Confidence 45678999999999999999997653 268999999999985 2 899999999885 467899999974 65 89
Q ss_pred HHHHhhhccCCCceEEEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCc
Q 005360 385 QKLYQQISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSAD 464 (700)
Q Consensus 385 ~~L~~~~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~ 464 (700)
++|++.++. ++++.++||+|.+..+ ...++++|||||+||||++++++++.++. .++++|+|++|+.++
T Consensus 84 ~~L~~~l~~---Gd~v~v~gP~g~f~l~-~~~~~~vliagG~GItP~~s~l~~l~~~~-------~~~v~l~~~~r~~~~ 152 (321)
T 2pia_A 84 ISFIDDTSE---GDAVEVSLPRNEFPLD-KRAKSFILVAGGIGITPMLSMARQLRAEG-------LRSFRLYYLTRDPEG 152 (321)
T ss_dssp HHHHHSCCT---TCEEEECCCBCCSCCC-TTCSEEEEEEEGGGHHHHHHHHHHHHHHC-------SSEEEEEEEESCGGG
T ss_pred HHHHhcCCC---CCEEEEeCCccccccC-CCCCCEEEEEecccHhHHHHHHHHHHHcC-------CCcEEEEEEECChhh
Confidence 999955443 3689999999997653 34789999999999999999999998752 268999999999999
Q ss_pred hhhHHHhccc
Q 005360 465 LSMLNIMLPV 474 (700)
Q Consensus 465 l~~~d~L~~~ 474 (700)
+.+.++|.++
T Consensus 153 ~~~~~el~~l 162 (321)
T 2pia_A 153 TAFFDELTSD 162 (321)
T ss_dssp CTTHHHHHST
T ss_pred hHHHHHHhcC
Confidence 9999999754
No 13
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.93 E-value=3.2e-25 Score=227.72 Aligned_cols=206 Identities=17% Similarity=0.156 Sum_probs=154.3
Q ss_pred ccceEEEEEEEecCCeEEEEEeCCCCcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC--CCchHHHH
Q 005360 311 RNRARLLSARALPCGVVELNFSKSPGLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE--GSWTQKLY 388 (700)
Q Consensus 311 ~~~~~vvs~~~l~~~~~~l~~~~~~~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~~L~ 388 (700)
+..+++++++.+++++.+++++ ++...++||||+.|++|..+..++|||||+|.|. ++.++++||.. |.+|++|+
T Consensus 4 ~~~~~V~~~~~~~~~~~~l~l~-~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~--~~~l~~~v~~~~~G~~s~~l~ 80 (248)
T 1fdr_A 4 WVTGKVTKVQNWTDALFSLTVH-APVLPFTAGQFTKLGLEIDGERVQRAYSYVNSPD--NPDLEFYLVTVPDGKLSPRLA 80 (248)
T ss_dssp EEEEEEEEEEECSSSEEEEEEE-CCCCCCCTTCEEEEEECC---CEEEEEECCSCTT--CSSEEEEEECCTTCSSHHHHH
T ss_pred eEEEEEEEEEEcCCCEEEEEEe-CCCCCcCCCCcEEEEccCCCCeeeeeecccCCCC--CCcEEEEEEEeCCCchhhHHH
Confidence 3467899999999999999997 4567899999999999965667899999999885 37899999986 89999998
Q ss_pred hhhccCCCceEEEEE-ccCCCCCCCCC-CCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchh
Q 005360 389 QQISSSVDRLEVSVE-GPYGPNSAHFL-RHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLS 466 (700)
Q Consensus 389 ~~~~~~~~~~~v~Ve-GPyG~~~~~~~-~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~ 466 (700)
+...+ +++.++ ||+|.+..+.. +.++++|||||+||||++++++++.++. ..++++|+|++|+.+++.
T Consensus 81 ~l~~G----d~v~v~~gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~~------~~~~v~l~~~~r~~~~~~ 150 (248)
T 1fdr_A 81 ALKPG----DEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDLD------RFKNLVLVHAARYAADLS 150 (248)
T ss_dssp TCCTT----CEEEEESSCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSCT------TCSEEEEEEEESSGGGCT
T ss_pred hCCCc----CEEEEecCCcceeEcCCCCCCceEEEEEecccHHHHHHHHHHHHhhC------CCCcEEEEEEcCCHHHhh
Confidence 65443 679999 99999754322 3789999999999999999999975432 257899999999999999
Q ss_pred hHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhhhcc--------CCCCCCCCeEeEeCCcchHHHH
Q 005360 467 MLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQSIWF--------KSNPSDSPVSGALGCNSWLWLA 534 (700)
Q Consensus 467 ~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~--------~p~~~~~~~~~vcGp~~~~~~~ 534 (700)
+.++|.++.. ....+++++..+|++++. ....+.+.+.+.. .+.+.+...+.+|||++|+...
T Consensus 151 ~~~el~~l~~----~~~~~~~~~~~~s~~~~~-~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp~~m~~~v 221 (248)
T 1fdr_A 151 YLPLMQELEK----RYEGKLRIQTVVSRETAA-GSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNPQMVRDT 221 (248)
T ss_dssp THHHHHHHHH----HTTTSEEEEEEESSSCCT-TEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHH----hCcCcEEEEEEEecCCCC-CCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCCHHHHHHH
Confidence 9998876542 123578999899987532 1112222221110 1122345678999999998543
No 14
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.93 E-value=9.9e-25 Score=240.21 Aligned_cols=169 Identities=17% Similarity=0.243 Sum_probs=138.6
Q ss_pred ccceEEEEEEEecCCeEEEEEeCCCC---cccCCCcEEEEEeCCCC--CceeeeeEeecCCCCCCCeEEEEEEeC-----
Q 005360 311 RNRARLLSARALPCGVVELNFSKSPG---LYYNPTSILFVNVPSIS--KLQWHPFTVTSNCNMEQDKLSILVKTE----- 380 (700)
Q Consensus 311 ~~~~~vvs~~~l~~~~~~l~~~~~~~---~~~~pGq~v~L~~p~~s--~~q~HPFTIas~p~~~~~~l~l~IK~~----- 380 (700)
++.+++++++.+++++.++++..+++ ..++||||+.|++|..+ ..++|||||+|.|. ++.++|.||..
T Consensus 154 ~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~~~~~ 231 (403)
T 1cqx_A 154 WRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPN--GRTYRISVKREGGGPQ 231 (403)
T ss_dssp CEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEEEETTTTEEEEEEEECCSCCC--SSCEEEEEECCCBTTB
T ss_pred ceeEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCEEEEEEecCCCCcceeecceecCCCC--CCeEEEEEEECCCCCC
Confidence 45789999999999999999987542 47999999999998422 36899999999874 57899999996
Q ss_pred --CCchHHHHhhhccCCCceEEEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEE
Q 005360 381 --GSWTQKLYQQISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICV 458 (700)
Q Consensus 381 --Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~ 458 (700)
|.+|++|++.++. ++++.+.||+|.+..+....++++|||||+||||++++++++.+ . ..++++|+|+
T Consensus 232 ~~G~~S~~L~~~l~~---Gd~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-~------~~~~v~l~~~ 301 (403)
T 1cqx_A 232 PPGYVSNLLHDHVNV---GDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-A------PPRQVVFVHG 301 (403)
T ss_dssp CCCHHHHHHHHHCCT---TCEEEECCCBCSCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-S------SCCCEEEEEE
T ss_pred CCCeehHHHhhCCCC---CCEEEEecCccCcccCCCCCCCEEEEEecccHhhHHHHHHHHHh-C------CCCcEEEEEE
Confidence 6699999975443 37899999999875433467899999999999999999999875 2 2578999999
Q ss_pred ECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCC
Q 005360 459 FKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDS 496 (700)
Q Consensus 459 vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~ 496 (700)
+|+.+++.+.+++.++.. +..++++++++++++
T Consensus 302 ~r~~~~~~~~~el~~l~~-----~~~~~~~~~~~s~~~ 334 (403)
T 1cqx_A 302 ARNSAVHAMRDRLREAAK-----TYENLDLFVFYDQPL 334 (403)
T ss_dssp ESCSSSCHHHHHHHHHHH-----HCTTEEEEEEESSCC
T ss_pred eCChhhCcHHHHHHHHHH-----hCCCcEEEEEECCCC
Confidence 999999999998876642 345688888888764
No 15
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.92 E-value=3.7e-25 Score=230.87 Aligned_cols=208 Identities=15% Similarity=0.220 Sum_probs=157.5
Q ss_pred ccceEEEEEEEecCCeEEEEEeCCC---CcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC-------
Q 005360 311 RNRARLLSARALPCGVVELNFSKSP---GLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE------- 380 (700)
Q Consensus 311 ~~~~~vvs~~~l~~~~~~l~~~~~~---~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~------- 380 (700)
+..+++++++.+++++.++++..+. ...+.||||+.|+++..+..++|||||+|.|. +++.++|.||..
T Consensus 16 ~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~ 94 (275)
T 1umk_A 16 KYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDD-DKGFVDLVIKVYFKDTHPK 94 (275)
T ss_dssp CEEEEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEEETTEEEEEEECCSSCTT-CCSEEEEEEECCCSSSBTT
T ss_pred cEEEEEEEEEEcCCCeEEEEEEcCCcccccCCCCCcEEEEEEeeCCcEEEeccccCCccC-CCCeEEEEEEEeccCcccc
Confidence 4567899999999999999998654 35799999999999866677999999999875 568999999986
Q ss_pred ----CCchHHHHhhhccCCCceEEEEEccCCCCCCC------C----------CCCCeEEEEEcCCChhhHHHHHHHHHH
Q 005360 381 ----GSWTQKLYQQISSSVDRLEVSVEGPYGPNSAH------F----------LRHESLVMVSGGSGISPFISIVRELIF 440 (700)
Q Consensus 381 ----Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~~------~----------~~~~~vvlIAGG~GITp~lsil~~l~~ 440 (700)
|.+|++|.++..+ +++.++||||.+... . ...++++|||||+||||++++++++.+
T Consensus 95 ~~~~G~~S~~L~~l~~G----d~v~v~gP~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~ 170 (275)
T 1umk_A 95 FPAGGKMSQYLESMQIG----DTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMK 170 (275)
T ss_dssp BTTCCHHHHHHHHCCTT----CEEEEEEEECSEEEEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHT
T ss_pred cCCCChhHHHHhcCCCC----CEEEEEcCccceEecCCccccccccccccccccCCceEEEEecCccHhHHHHHHHHHHh
Confidence 8899999765444 689999999986320 1 246899999999999999999999976
Q ss_pred hcCCCCCCCCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhh-hc-cCCCCCC
Q 005360 441 QSNNNPDYKIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQS-IW-FKSNPSD 518 (700)
Q Consensus 441 ~~~~~~~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~-~~-~~p~~~~ 518 (700)
+.. ..++++|+|++|+.+|+.+.++|.++.. ....+++++..++++.+++....+.+.+. +. ..+.+.+
T Consensus 171 ~~~-----~~~~v~l~~~~r~~~d~~~~~el~~l~~----~~~~~~~~~~~~s~~~~~~~~~~g~v~~~~l~~~l~~~~~ 241 (275)
T 1umk_A 171 DPD-----DHTVCHLLFANQTEKDILLRPELEELRN----KHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEE 241 (275)
T ss_dssp CTT-----CCCEEEEEEEESSGGGCTTHHHHHHHHH----HCTTTEEEEEEESSCCSSCSSEESSCCHHHHHHHSCCGGG
T ss_pred CCC-----CCcEEEEEEEcCCHHHhhHHHHHHHHHH----hCcCcEEEEEEEcCCCccccCccCccCHHHHHHhcCCCCC
Confidence 421 3578999999999999999999876542 12236888777787654544333322211 11 1122234
Q ss_pred CCeEeEeCCcchHH
Q 005360 519 SPVSGALGCNSWLW 532 (700)
Q Consensus 519 ~~~~~vcGp~~~~~ 532 (700)
...+.+|||++|+.
T Consensus 242 ~~~vyvCGp~~m~~ 255 (275)
T 1umk_A 242 EPLVLMCGPPPMIQ 255 (275)
T ss_dssp CCEEEEESCHHHHH
T ss_pred CeEEEEECCHHHHH
Confidence 56889999999986
No 16
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.92 E-value=8.8e-25 Score=235.05 Aligned_cols=203 Identities=15% Similarity=0.189 Sum_probs=157.1
Q ss_pred cceEEEEEEEecCCeEEEEEeCCC---CcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC--CCchHH
Q 005360 312 NRARLLSARALPCGVVELNFSKSP---GLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE--GSWTQK 386 (700)
Q Consensus 312 ~~~~vvs~~~l~~~~~~l~~~~~~---~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~~ 386 (700)
..+++++++.+++++.+++++.+. ...++||||+.|++|.. .++|||||+|.|. ++.++|.||.. |.+|++
T Consensus 109 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~--~~~l~~~vk~~~~G~~S~~ 184 (338)
T 1krh_A 109 FEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGT--TETRSYSFSSQPG--NRLTGFVVRNVPQGKMSEY 184 (338)
T ss_dssp EEEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEECTTS--SCEEEEECCSCTT--CSEEEEEEECCTTCHHHHH
T ss_pred EEEEEEEEEEcCCCEEEEEEEeCCCCCCCCcCCCCeEEEEcCCC--CccccccccCCCC--CCeEEEEEEEcCCCCchhh
Confidence 457889999999999999998765 47899999999999863 5899999999874 67899999997 889999
Q ss_pred HHhhhccCCCceEEEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchh
Q 005360 387 LYQQISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLS 466 (700)
Q Consensus 387 L~~~~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~ 466 (700)
|++.++. ++++.++||||++.... ..++++|||||+||||++++++++.++.. .++++|+|++|+.+|+.
T Consensus 185 L~~~l~~---Gd~v~v~gP~G~f~~~~-~~~~~vliagGtGiaP~~s~l~~l~~~~~------~~~v~l~~~~r~~~d~~ 254 (338)
T 1krh_A 185 LSVQAKA---GDKMSFTGPFGSFYLRD-VKRPVLMLAGGTGIAPFLSMLQVLEQKGS------EHPVRLVFGVTQDCDLV 254 (338)
T ss_dssp HHTTCCT---TCEEEEEEEECSCSCCC-CSSCEEEEEEGGGHHHHHHHHHHHHHHCC------SSCEEEEEEESSGGGCC
T ss_pred HhhccCC---CCEEEEECCccceEeCC-CCceEEEEEccccHhHHHHHHHHHHHcCC------CCeEEEEEEeCCHHHhh
Confidence 9865543 36899999999986532 34899999999999999999999987632 56899999999999999
Q ss_pred hHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhhhccCCCCCCCCeEeEeCCcchHHHH
Q 005360 467 MLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQSIWFKSNPSDSPVSGALGCNSWLWLA 534 (700)
Q Consensus 467 ~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~~p~~~~~~~~~vcGp~~~~~~~ 534 (700)
+.++|.++.. +..+++++.+++++++.+. ..+.+.+.+...-.++++..+.+|||++|+..+
T Consensus 255 ~~~el~~l~~-----~~~~~~~~~~~s~~~~~~~-~~g~v~~~l~~~~~~~~~~~vy~CGp~~m~~~v 316 (338)
T 1krh_A 255 ALEQLDALQQ-----KLPWFEYRTVVAHAESQHE-RKGYVTGHIEYDWLNGGEVDVYLCGPVPMVEAV 316 (338)
T ss_dssp CHHHHHHHHH-----HCTTEEEEEEETTCCSSSS-EESCSGGGCCGGGGGGGCSEEEEEEEHHHHHHH
T ss_pred hHHHHHHHHH-----hCCCeEEEEEEecCCCCCC-ccCccCHHHHHhhcccCCcEEEEECCHHHHHHH
Confidence 8898876542 3457999999998765543 222222222100001134568999999998643
No 17
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.92 E-value=1.5e-24 Score=227.87 Aligned_cols=206 Identities=11% Similarity=0.117 Sum_probs=156.5
Q ss_pred cceEEEEEEEecCCeEEEEEeCCC--CcccCCCcEEEEEeCCC-----------------------------CCceeeee
Q 005360 312 NRARLLSARALPCGVVELNFSKSP--GLYYNPTSILFVNVPSI-----------------------------SKLQWHPF 360 (700)
Q Consensus 312 ~~~~vvs~~~l~~~~~~l~~~~~~--~~~~~pGq~v~L~~p~~-----------------------------s~~q~HPF 360 (700)
..+++++++.+++++.++++..++ .+.++||||+.|.+|.. +..++|||
T Consensus 10 ~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~R~y 89 (290)
T 2r6h_A 10 WECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAY 89 (290)
T ss_dssp EEEEEEEEEESSSSEEEEEEECSTTCCCCCCTTCEEEEEECSEEEEGGGCCCCTTTHHHHHHTTGGGCEEEECSCEEEEE
T ss_pred EEEEEEEeeecCCCeEEEEEEcCCCCccccCCCceEEEEcccccccccccccchhhcccccccccccccccCCCCcceee
Confidence 457899999999999999998764 56799999999999852 34689999
Q ss_pred EeecCCCCCCCeEEEEEEe-----------------CCCchHHHHhhhccCCCceEEEEEccCCCCCCCCCCCCeEEEEE
Q 005360 361 TVTSNCNMEQDKLSILVKT-----------------EGSWTQKLYQQISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVS 423 (700)
Q Consensus 361 TIas~p~~~~~~l~l~IK~-----------------~Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIA 423 (700)
||+|.|. +++.++|.||. .|.+|++|+++..+ +++.++||||.+... ...++++|||
T Consensus 90 Si~s~~~-~~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~l~~G----d~v~v~gP~G~f~~~-~~~~~~vlia 163 (290)
T 2r6h_A 90 SMANYPA-EGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPG----DKVMMSGPYGDFHIQ-DTDAEMLYIG 163 (290)
T ss_dssp ECCSCTT-CCSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTTCCTT----CEEEEEEEECCCCCC-SSSCEEEEEE
T ss_pred eccCCCC-CCCEEEEEEEEeccccccccccccccCCCcchhhHHhcCCCC----CEEEEEecccCCcCC-CCCCeEEEEE
Confidence 9999985 46789999996 47789999984433 679999999998753 4678999999
Q ss_pred cCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCCC--CCCc
Q 005360 424 GGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSE--QPKT 501 (700)
Q Consensus 424 GG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~--~~~~ 501 (700)
||+||||+++++++++++.. ..++++|+|++|+.+++.+.++|.++.. +..+++++.+++++.+ .+..
T Consensus 164 gGtGitP~~s~l~~~~~~~~-----~~~~v~l~~~~r~~~d~~~~~el~~l~~-----~~~~~~~~~~~s~~~~~~~~~g 233 (290)
T 2r6h_A 164 GGAGMAPLRAQILHLFRTLK-----TGRKVSYWYGARSKNEIFYEEDFREIER-----EFPNFKFHIALSDPQPEDNWTG 233 (290)
T ss_dssp EGGGHHHHHHHHHHHHHTSC-----CCSCEEEEEEESSGGGCCSHHHHHHHHH-----HCTTEEEEEEESSCCGGGCCCS
T ss_pred CccCHHHHHHHHHHHHHhcC-----CCCcEEEEEEcCCHHHHHHHHHHHHHHH-----hCCCeEEEEEEccCCcccCCCC
Confidence 99999999999999886532 2468999999999999999999876542 3457899999988632 2222
Q ss_pred chhhhhhhh----ccCCCCCCCCeEeEeCCcchHHH
Q 005360 502 DTLKELQSI----WFKSNPSDSPVSGALGCNSWLWL 533 (700)
Q Consensus 502 ~~~~~~~~~----~~~p~~~~~~~~~vcGp~~~~~~ 533 (700)
..+.+.+.+ .......+...+.+|||++|+..
T Consensus 234 ~~g~v~~~~~~~~l~~~~~~~~~~vyvCGp~~m~~~ 269 (290)
T 2r6h_A 234 YVGFIHQVIYDNYLKDHDAPEDIEYYMCGPGPMANA 269 (290)
T ss_dssp CBSCHHHHHHHHTTTTCSCGGGEEEEEECCHHHHHH
T ss_pred eeEecCHHHHHhHHhhccCcCCcEEEEECCHHHHHH
Confidence 222222111 11101123457899999998754
No 18
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.92 E-value=1.7e-24 Score=225.17 Aligned_cols=210 Identities=21% Similarity=0.224 Sum_probs=154.8
Q ss_pred ccceEEEEEEEecCCeEEEEEeCCC---CcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC-------
Q 005360 311 RNRARLLSARALPCGVVELNFSKSP---GLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE------- 380 (700)
Q Consensus 311 ~~~~~vvs~~~l~~~~~~l~~~~~~---~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~------- 380 (700)
+..+++++++.+++++.++++..+. ...++||||++|.++..+..++|||||+|.+. +++.++|.||..
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~-~~~~~~l~vk~~~~~~~~~ 90 (270)
T 2cnd_A 12 RIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVD-EIGHFDLLVKVYFKNEHPK 90 (270)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTT-CCSEEEEEEECCCSSCBTT
T ss_pred eEEEEEEEEEEeCCCeEEEEEECCCCccccCCCCCCEEEEEeeeCCcEEEEeeccCCCcc-CCCEEEEEEEEeccCcccc
Confidence 4567899999999999999998654 35799999999999866677999999999885 468999999973
Q ss_pred ----CCchHHHHhhhccCCCceEEEEEccCCCCCC------CC----CCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCC
Q 005360 381 ----GSWTQKLYQQISSSVDRLEVSVEGPYGPNSA------HF----LRHESLVMVSGGSGISPFISIVRELIFQSNNNP 446 (700)
Q Consensus 381 ----Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~------~~----~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~ 446 (700)
|.+|++|.++..+ +++.++||||.+.. .. ...++++|||||+||||++++++++.++..
T Consensus 91 ~~~~G~~s~~l~~l~~G----d~v~v~gP~G~~~~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~--- 163 (270)
T 2cnd_A 91 FPNGGLMTQYLDSLPVG----SYIDVKGPLGHVEYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQP--- 163 (270)
T ss_dssp BTTCCHHHHHHHHCCTT----CEEEEEEEECSEECCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHTTT---
T ss_pred cCCCCchhhHHhcCCCC----CEEEEECCcccceeccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhcCC---
Confidence 7799999755444 68999999998311 11 247899999999999999999999986521
Q ss_pred CCCCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCC---CCCCCcchhhhhhh-hc-cCCCCCCCCe
Q 005360 447 DYKIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRD---SEQPKTDTLKELQS-IW-FKSNPSDSPV 521 (700)
Q Consensus 447 ~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~---~~~~~~~~~~~~~~-~~-~~p~~~~~~~ 521 (700)
...++++|+|++|+.+|+.+.++|.++.. ....+++++..++++ ++++....+.+.+. +. .-+...+...
T Consensus 164 -~~~~~v~l~~~~r~~~d~~~~~el~~l~~----~~~~~~~~~~~~s~~~~~~~~~~~~~g~v~~~~l~~~l~~~~~~~~ 238 (270)
T 2cnd_A 164 -EDHTEMHLVYANRTEDDILLRDELDRWAA----EYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLREHVPEGGDDTL 238 (270)
T ss_dssp -TCCCEEEEEEEESCGGGCTTHHHHHHHHH----HCTTTEEEEEEESCCSCGGGCCCSEESSCCHHHHHHHSCCCSSSEE
T ss_pred -CCCcEEEEEEEcCCHHHcchHHHHHHHHH----HCcCcEEEEEEECCCCCCCCCcccccccCCHHHHHHhcCCCcCCEE
Confidence 12578999999999999999999876642 122368888777763 22332222222211 11 1122334567
Q ss_pred EeEeCCcchHHH
Q 005360 522 SGALGCNSWLWL 533 (700)
Q Consensus 522 ~~vcGp~~~~~~ 533 (700)
+.+|||++|+..
T Consensus 239 vyvCGp~~m~~~ 250 (270)
T 2cnd_A 239 ALACGPPPMIQF 250 (270)
T ss_dssp EEEECCHHHHHT
T ss_pred EEEECCHHHHHH
Confidence 899999999853
No 19
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.91 E-value=4.8e-24 Score=222.39 Aligned_cols=207 Identities=14% Similarity=0.181 Sum_probs=154.9
Q ss_pred cceEEEEEEEecCCeEEEEEeCCCCcccCCCcEEEEEeCCC-CCceeeeeEeecCCCCCCCeEEEEEEeC--CCchHHHH
Q 005360 312 NRARLLSARALPCGVVELNFSKSPGLYYNPTSILFVNVPSI-SKLQWHPFTVTSNCNMEQDKLSILVKTE--GSWTQKLY 388 (700)
Q Consensus 312 ~~~~vvs~~~l~~~~~~l~~~~~~~~~~~pGq~v~L~~p~~-s~~q~HPFTIas~p~~~~~~l~l~IK~~--Gg~T~~L~ 388 (700)
..+++++++.+++++.+++++.++...++||||+.|++|.. +..++|||||+|.|. ++.+++.||.. |.+|++|.
T Consensus 17 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~--~~~~~l~v~~~~~G~~s~~l~ 94 (272)
T 2bgi_A 17 DAQTVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAW--DEELEFYSIKVPDGPLTSRLQ 94 (272)
T ss_dssp EEEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEECTTSCEEEEEEECCSCTT--CSEEEEEEECCTTCTTHHHHT
T ss_pred EEEEEEEEEEcCCCEEEEEEeCCCCCccCCCCEEEEEeccCCCCeeeeeeeeccCCC--CCeEEEEEEEccCCCchhHHH
Confidence 35789999999999999999987777899999999999853 567899999999884 47899999986 88999997
Q ss_pred hhhccCCCceEEEEE-ccCCCCCCCCC-CCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchh
Q 005360 389 QQISSSVDRLEVSVE-GPYGPNSAHFL-RHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLS 466 (700)
Q Consensus 389 ~~~~~~~~~~~v~Ve-GPyG~~~~~~~-~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~ 466 (700)
++..+ +++.++ ||||.+..+.. .+++++|||||+||||++++++++.++.. .++++|+|++|+.+++.
T Consensus 95 ~l~~G----d~v~v~~gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~------~~~v~l~~~~r~~~~~~ 164 (272)
T 2bgi_A 95 HIKVG----EQIILRPKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYEK------FDEVIMMHACRTVAELE 164 (272)
T ss_dssp TCCTT----CEEEEEEEEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGTS------CSEEEEEEEESSSGGGH
T ss_pred hCCCC----CEEEEeeCCCCcccccccccCCeEEEEeecccHHHHHHHHHHHHhcCC------CCcEEEEEEeCCHHHhh
Confidence 55443 678899 99999764332 37899999999999999999998765422 56899999999999999
Q ss_pred hHHHhc-ccCCCCcc-cC-CCceEEEEEEeCCCCCCCcchhhhhhhhcc--------CCCC-CCCCeEeEeCCcchHHH
Q 005360 467 MLNIML-PVSDAPTE-LS-KLQLQIEAYVTRDSEQPKTDTLKELQSIWF--------KSNP-SDSPVSGALGCNSWLWL 533 (700)
Q Consensus 467 ~~d~L~-~~~~~~~~-l~-~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~--------~p~~-~~~~~~~vcGp~~~~~~ 533 (700)
+.++|. ++...+.. .. ..+++++..+|+++.. ..+.+.+.+.. .|.. .+...+.+|||++|+..
T Consensus 165 ~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~~---~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~~m~~~ 240 (272)
T 2bgi_A 165 YGRQLVEALQEDPLIGELVEGKLKYYPTTTREEFH---HMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGSLAFNVD 240 (272)
T ss_dssp HHHHHHHHHHHCTTTTTTSTTTEEEEEEESSSCCS---SBCCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEECHHHHHH
T ss_pred HHHHHHHHHHhcchhhcccCCcEEEEEEecCCccc---cCceechHHHhhhHhhhcccccCCCCCcEEEEECCHHHHHH
Confidence 999987 55310000 01 3578888888887321 11111111110 1211 24567899999999753
No 20
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.91 E-value=1.3e-23 Score=223.76 Aligned_cols=213 Identities=15% Similarity=0.149 Sum_probs=156.8
Q ss_pred ceEEEEEEEecC-----CeEEEEEeCCCCcccCCCcEEEEEeCCC----CCceeeeeEeecCCCC---CCCeEEEEEEe-
Q 005360 313 RARLLSARALPC-----GVVELNFSKSPGLYYNPTSILFVNVPSI----SKLQWHPFTVTSNCNM---EQDKLSILVKT- 379 (700)
Q Consensus 313 ~~~vvs~~~l~~-----~~~~l~~~~~~~~~~~pGq~v~L~~p~~----s~~q~HPFTIas~p~~---~~~~l~l~IK~- 379 (700)
..++++++.+++ ++.++++..+....++||||+.|++|.. ...++|||||+|+|.+ +++.++|.||.
T Consensus 39 ~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~ 118 (314)
T 1fnb_A 39 VGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVKRL 118 (314)
T ss_dssp EEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSSBCCCEEEECCSCSSCTTSSSCEEEEEEECC
T ss_pred EEEEEEEEEecCCCCCCcEEEEEEecCCCCCcCCCCEEEEecCCCCcCCCcCCceeEecCCCCcccCCCCCEEEEEEEEE
Confidence 468889999987 8999999987668899999999999864 2357899999999852 25789999996
Q ss_pred ----------CCCchHHHHhhhccCCCceEEEEEccCCCCCC-CCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCC
Q 005360 380 ----------EGSWTQKLYQQISSSVDRLEVSVEGPYGPNSA-HFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDY 448 (700)
Q Consensus 380 ----------~Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~-~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~ 448 (700)
.|.+|+.|+++..+ +++.++||+|++.. +....++++|||||+||||+++++++++.+.. +...
T Consensus 119 ~y~~~~g~~~~G~~S~~L~~l~~G----d~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~-~~~~ 193 (314)
T 1fnb_A 119 IYTNDAGETIKGVCSNFLCDLKPG----AEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKH-DDYK 193 (314)
T ss_dssp EEECTTSCEEECHHHHHHHHCCTT----CEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCB-TTBC
T ss_pred EeccCCCCcCCCchhhHhhcCCCC----CEEEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhcc-cccc
Confidence 37789999985444 67999999998753 22346899999999999999999999876532 1111
Q ss_pred CCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhhhcc-----CC-CCCCCCeE
Q 005360 449 KIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQSIWF-----KS-NPSDSPVS 522 (700)
Q Consensus 449 ~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~-----~p-~~~~~~~~ 522 (700)
..++++|+|++|+.+|+.+.++|.++.. ....+++++..+|++++++....+...+.+.. .+ ...+...+
T Consensus 194 ~~~~v~L~~g~R~~~d~~~~~el~~l~~----~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~~v 269 (314)
T 1fnb_A 194 FNGLAWLFLGVPTSSSLLYKEEFEKMKE----KAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYV 269 (314)
T ss_dssp CCSEEEEEEEESSGGGCCSHHHHHHHHH----HCTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTTSTTEEE
T ss_pred CCCCEEEEEecCCHHHhhhHHHHHHHHH----hCCCcEEEEEEECCCCcccCCCceechHHHHHhHHHHHHHHhcCCeEE
Confidence 2468999999999999999999876542 12236899999998764443222211111110 00 11245678
Q ss_pred eEeCCcchHHHH
Q 005360 523 GALGCNSWLWLA 534 (700)
Q Consensus 523 ~vcGp~~~~~~~ 534 (700)
.+|||++|+-..
T Consensus 270 yvCGp~~m~~~v 281 (314)
T 1fnb_A 270 YMCGLKGMEKGI 281 (314)
T ss_dssp EEEECTTHHHHH
T ss_pred EEECCHHHHHHH
Confidence 999999998643
No 21
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.91 E-value=2.4e-23 Score=220.49 Aligned_cols=212 Identities=13% Similarity=0.181 Sum_probs=154.2
Q ss_pred ceEEEEEEEecC-----CeEEEEEeCCC-CcccCCCcEEEEEeCCCC----CceeeeeEeecCCCC---CCCeEEEEEEe
Q 005360 313 RARLLSARALPC-----GVVELNFSKSP-GLYYNPTSILFVNVPSIS----KLQWHPFTVTSNCNM---EQDKLSILVKT 379 (700)
Q Consensus 313 ~~~vvs~~~l~~-----~~~~l~~~~~~-~~~~~pGq~v~L~~p~~s----~~q~HPFTIas~p~~---~~~~l~l~IK~ 379 (700)
..++++.+.+++ ++.+++|..+. .+.++||||+.|.+|..+ .+++|||||+|+|.. +++.++|.||.
T Consensus 23 ~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~~~~~~~~~~~l~l~Vk~ 102 (304)
T 2bmw_A 23 IGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQ 102 (304)
T ss_dssp EEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBCTTSCBCCCEEEEBCSCTTTTTTSSSEEEEEEEC
T ss_pred EEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCcccCCCCCCcceecCCCCcccCCCCCEEEEEEEE
Confidence 468899999998 89999998653 478999999999998642 357899999998742 35789999997
Q ss_pred ------------CCCchHHHHhhhccCCCceEEEEEccCCCCCC-CCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCC--
Q 005360 380 ------------EGSWTQKLYQQISSSVDRLEVSVEGPYGPNSA-HFLRHESLVMVSGGSGISPFISIVRELIFQSNN-- 444 (700)
Q Consensus 380 ------------~Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~-~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~-- 444 (700)
.|.+|++|+++..+ .++.++||||.+.. +....++++|||||+||||+++++++++.+...
T Consensus 103 ~~y~~~~~~~~~~G~~S~~L~~l~~G----d~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~ 178 (304)
T 2bmw_A 103 LEYKHPESGETVYGVCSTYLTHIEPG----SEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAA 178 (304)
T ss_dssp CEECSSSSSSCEECHHHHHHHTCCTT----CEEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHH
T ss_pred EEeeccccCcCCCcchhhHHhcCCCC----CEEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhc
Confidence 46699999985444 68999999998753 223568999999999999999999998765310
Q ss_pred -CCCCCCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhh----hhh---hhccCCCC
Q 005360 445 -NPDYKIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLK----ELQ---SIWFKSNP 516 (700)
Q Consensus 445 -~~~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~----~~~---~~~~~p~~ 516 (700)
......++++|+|++|+.+|+.+.|+|.++.. ....+++++..+|++++++....+. +.+ .+... .+
T Consensus 179 ~~~~~~~~~v~l~~g~r~~~d~~~~~el~~~~~----~~~~~~~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~~~-~~ 253 (304)
T 2bmw_A 179 NPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQ----KYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQL-IK 253 (304)
T ss_dssp CTTCCCCSCEEEEEEESSGGGCTTHHHHHHHHH----HCTTTEEEEEEETTTCBCTTSSBCCHHHHHHHTHHHHHHH-HT
T ss_pred ccccccCCCEEEEEEeCChHhcchHHHHHHHHH----hCCCcEEEEEEEcCCCCCCCCCcceehHHHHHhHHHHHHH-hh
Confidence 00012468999999999999999999976542 1124789999999886443221111 111 11100 01
Q ss_pred CCCCeEeEeCCcchHHH
Q 005360 517 SDSPVSGALGCNSWLWL 533 (700)
Q Consensus 517 ~~~~~~~vcGp~~~~~~ 533 (700)
.+...+.+|||++|+.-
T Consensus 254 ~~~~~vyvCGp~~m~~~ 270 (304)
T 2bmw_A 254 NQKTHTYICGPPPMEEG 270 (304)
T ss_dssp STTEEEEEEECTTHHHH
T ss_pred cCCcEEEEECCHHHHHH
Confidence 23567899999998754
No 22
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.91 E-value=1.7e-23 Score=217.10 Aligned_cols=193 Identities=17% Similarity=0.185 Sum_probs=146.4
Q ss_pred ceEEEEEEEecCCeEEEEEeCCC-CcccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEe--CCCchHHHHh
Q 005360 313 RARLLSARALPCGVVELNFSKSP-GLYYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKT--EGSWTQKLYQ 389 (700)
Q Consensus 313 ~~~vvs~~~l~~~~~~l~~~~~~-~~~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~--~Gg~T~~L~~ 389 (700)
.+++++++.+++++.+++++.+. ...++||||+.|++|..+..++|||||+|.|. ++++++|.||. .|..|+.|++
T Consensus 7 ~~~V~~~~~~t~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~~~R~ySi~s~~~-~~~~l~~~vk~~~~G~~S~~l~~ 85 (262)
T 1ep3_B 7 MMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDK-RAKTCTILYRIGDETTGTYKLSK 85 (262)
T ss_dssp EEEEEEEEEEETTEEEEEEESGGGGGCCSTTCEEEECCSCTTCCSCEEEECCEEET-TTTEEEEEEECCCTTSHHHHHHT
T ss_pred ceEEEEEEEecCCEEEEEEEcCcccccCCCCceEEEEcCCCCceeeEEEEeeeecC-CCCEEEEEEEEecCCchHHHHhc
Confidence 57899999999999999998765 35789999999999875567999999999875 46799999999 8999999986
Q ss_pred hhccCCCceEEEEEccCCC-CCCCCC-CCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchhh
Q 005360 390 QISSSVDRLEVSVEGPYGP-NSAHFL-RHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLSM 467 (700)
Q Consensus 390 ~~~~~~~~~~v~VeGPyG~-~~~~~~-~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~~ 467 (700)
+..+ +++.++||+|+ +..+.. ..++++|||||+||||++++++++.++ .++++|+|++|+++|+.+
T Consensus 86 l~~G----d~v~v~gP~G~~f~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~--------~~~v~l~~~~r~~~~~~~ 153 (262)
T 1ep3_B 86 LESG----AKVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKT--------GCQMTILLGFASENVKIL 153 (262)
T ss_dssp CCTT----CEEEEEEEESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHH--------TCEEEEEEEESSGGGCCC
T ss_pred CCCC----CEEEEEcccCCCccCCCccCCCeEEEEECcCcHHHHHHHHHHHHHc--------CCeEEEEEEcCCHHHhhh
Confidence 5444 68999999999 543222 378999999999999999999999865 258999999999999999
Q ss_pred HHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhhhccCCCCCCCCeEeEeCCcchHH
Q 005360 468 LNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQSIWFKSNPSDSPVSGALGCNSWLW 532 (700)
Q Consensus 468 ~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~~p~~~~~~~~~vcGp~~~~~ 532 (700)
.++|.++.. . ++++. +++ ++....+.+.+.+... .+ +...+.+|||++|+.
T Consensus 154 ~~el~~l~~-----~----~~~~~-~~~--~~~~~~g~v~~~l~~~-~~-~~~~vyvCGp~~m~~ 204 (262)
T 1ep3_B 154 ENEFSNLKN-----V----TLKIA-TDD--GSYGTKGHVGMLMNEI-DF-EVDALYTCGAPAMLK 204 (262)
T ss_dssp HHHHHTSTT-----E----EEEEE-ETT--CSSSEESCHHHHHHHC-CS-CCSEEEEESCHHHHH
T ss_pred HHHHhhhcc-----C----cEEEE-ECC--CCCcceeehHHHHHhh-cc-CCCEEEEECCHHHHH
Confidence 999875431 1 33322 332 2222222222222211 11 245789999999874
No 23
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.90 E-value=2e-23 Score=229.71 Aligned_cols=214 Identities=13% Similarity=0.121 Sum_probs=156.2
Q ss_pred cceEEEEEEEecC-----CeEEEEEeCCC-CcccCCCcEEEEEeCCC---C-CceeeeeEeecCCCC---CCCeEEEEEE
Q 005360 312 NRARLLSARALPC-----GVVELNFSKSP-GLYYNPTSILFVNVPSI---S-KLQWHPFTVTSNCNM---EQDKLSILVK 378 (700)
Q Consensus 312 ~~~~vvs~~~l~~-----~~~~l~~~~~~-~~~~~pGq~v~L~~p~~---s-~~q~HPFTIas~p~~---~~~~l~l~IK 378 (700)
..+++++++.+++ ++.+++++.+. ...|+||||+.|++|.. + .+++|||||+|.|.+ +++.++|+||
T Consensus 123 ~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySIas~p~~~~~~~~~l~l~Vk 202 (402)
T 2b5o_A 123 FLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVR 202 (402)
T ss_dssp EEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEETTTEECCCEEEEBCSCTTTTTTSSCEEEEEEE
T ss_pred EEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCCcCCCccCceeeeccCCCccccCCCCEEEEEEE
Confidence 4578999999998 99999998765 37899999999999863 2 358999999999852 2578999999
Q ss_pred e------------CCCchHHHHhhhccCCCceEEEEEccCCCCCC-CCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCC
Q 005360 379 T------------EGSWTQKLYQQISSSVDRLEVSVEGPYGPNSA-HFLRHESLVMVSGGSGISPFISIVRELIFQSNNN 445 (700)
Q Consensus 379 ~------------~Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~-~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~ 445 (700)
. .|.+|+.|+++ .. + .+++.++||||.+.. +....++++|||||+||||+++++++++++.. .
T Consensus 203 ~~~y~~~~~~~~~~G~~S~~L~~l-~~-G-~d~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~-~ 278 (402)
T 2b5o_A 203 QLEYQDPESGETVYGVCSTYLCNL-PV-G-TDDVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQH-E 278 (402)
T ss_dssp CCEEECTTTCCEEECHHHHHHHTC-CT-T-CCCEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCC-S
T ss_pred EeeecccccCcCCCCchhHHHhhC-CC-C-CceEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhcc-c
Confidence 7 57799999983 33 2 156899999999753 22346899999999999999999999886532 1
Q ss_pred CCCCCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhhhcc------CCCCCCC
Q 005360 446 PDYKIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQSIWF------KSNPSDS 519 (700)
Q Consensus 446 ~~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~------~p~~~~~ 519 (700)
.....++++|+|++|+.+|+.+.|+|.++.. ....+++++..++++++++....+.....+.. ...+.+.
T Consensus 279 ~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~----~~~~~~~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~ 354 (402)
T 2b5o_A 279 DYKFKGKAWLIFGVPYTANILYKDDFEKMAA----ENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPN 354 (402)
T ss_dssp SCCCCSEEEEEEEESSGGGCTTHHHHHHHHH----HCTTTEEEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHHHTSTT
T ss_pred cccccCCEEEEEecCCHHHhHHHHHHHHHHH----hCCCcEEEEEEECCCCcccCCCccchHHHHHHhHHHHHHHhccCC
Confidence 1112478999999999999999999986642 12237899999998864443222111111110 0001235
Q ss_pred CeEeEeCCcchHHH
Q 005360 520 PVSGALGCNSWLWL 533 (700)
Q Consensus 520 ~~~~vcGp~~~~~~ 533 (700)
..+.+|||++|+--
T Consensus 355 ~~vyvCGP~~M~~~ 368 (402)
T 2b5o_A 355 THVYMCGLKGMQPP 368 (402)
T ss_dssp EEEEEEECGGGHHH
T ss_pred cEEEEECCHHHHHH
Confidence 67899999999854
No 24
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.89 E-value=3.6e-23 Score=220.16 Aligned_cols=209 Identities=15% Similarity=0.171 Sum_probs=152.6
Q ss_pred ceEEEEEEEecCC--------------eEEEEEeCCCC-cccCCCcEEEEEeCCCC----C-------ceeeeeEeecCC
Q 005360 313 RARLLSARALPCG--------------VVELNFSKSPG-LYYNPTSILFVNVPSIS----K-------LQWHPFTVTSNC 366 (700)
Q Consensus 313 ~~~vvs~~~l~~~--------------~~~l~~~~~~~-~~~~pGq~v~L~~p~~s----~-------~q~HPFTIas~p 366 (700)
.+++++++.++++ +.+++++.+.. +.++||||+.|++|... . +++|||||+|+|
T Consensus 23 ~~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~~~~~~~~R~ySi~s~p 102 (314)
T 2rc5_A 23 KAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIASPS 102 (314)
T ss_dssp EEEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHHHHHTTCSCCBCCCEEEECCSCT
T ss_pred EEEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccccCccchhhcCCCceeeeccCCc
Confidence 5688999999987 99999987654 78999999999998642 2 478999999987
Q ss_pred CC---CCCeEEEEEEeC------------CCchHHHHhhhccCCCceEEEEEccCCCCCCCC--CCCCeEEEEEcCCChh
Q 005360 367 NM---EQDKLSILVKTE------------GSWTQKLYQQISSSVDRLEVSVEGPYGPNSAHF--LRHESLVMVSGGSGIS 429 (700)
Q Consensus 367 ~~---~~~~l~l~IK~~------------Gg~T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~--~~~~~vvlIAGG~GIT 429 (700)
.. +++.++|.||.. |.+|+.|+++..+ +++.++||||.+.... ...++++|||||+|||
T Consensus 103 ~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~l~~G----d~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIa 178 (314)
T 2rc5_A 103 YSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCDLKPG----DEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIA 178 (314)
T ss_dssp TCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHTCCTT----CEEEEEEEECSSSCCCSSCBCSCEEEEEEGGGGH
T ss_pred cccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhcCCCc----CEEEEEeccCCceeCCCCCCCCCEEEEECCccHH
Confidence 41 357899999983 4489999984433 6899999999875322 3478999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCC-Ccchhhhhh
Q 005360 430 PFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQP-KTDTLKELQ 508 (700)
Q Consensus 430 p~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~-~~~~~~~~~ 508 (700)
|++++++++..+.. ....++++|+|++|+.+++.+.++|.++.. +..+++++.++|++.+.+ ....+...+
T Consensus 179 P~~s~l~~l~~~~~---~~~~~~v~l~~g~r~~~d~~~~~el~~l~~-----~~~~~~~~~~~s~~~~~~~~g~~~~v~~ 250 (314)
T 2rc5_A 179 PFIGMSEELLEHKL---IKFTGNITLVYGAPYSDELVMMDYLKGLES-----KHKNFKLITAISREEKNSFDGGRMYISH 250 (314)
T ss_dssp HHHHHHHHHHTTCS---SCBCSCEEEEEEESSGGGSCSHHHHHHHHH-----HHSSEEEEEEETTTCBCTTTSSBCCHHH
T ss_pred HHHHHHHHHHHhcc---cCCCCcEEEEEEeCCHHHHhHHHHHHHHHH-----hCCcEEEEEEECCCCCcccCCCceehhH
Confidence 99999999876421 112468999999999999999999876542 224789999999875332 211111111
Q ss_pred -------hhccCCCCCCCCeEeEe-CCcchHHHHH
Q 005360 509 -------SIWFKSNPSDSPVSGAL-GCNSWLWLAV 535 (700)
Q Consensus 509 -------~~~~~p~~~~~~~~~vc-Gp~~~~~~~~ 535 (700)
.+... .+.+..+ .+| ||++|+....
T Consensus 251 ~l~~~~~~l~~~-~~~~~~~-yvCGGp~~m~~~v~ 283 (314)
T 2rc5_A 251 RVREQAEAVKKI-LNGGGRF-YICGGPKGMEKGVI 283 (314)
T ss_dssp HHHHTHHHHHHH-HHHTCEE-EEEESSTTTHHHHH
T ss_pred HHHHhHHHHHHH-hhcCCeE-EEeCCcHHHHHHHH
Confidence 11000 0012345 999 9999986543
No 25
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.84 E-value=2.6e-21 Score=189.04 Aligned_cols=97 Identities=20% Similarity=0.427 Sum_probs=71.1
Q ss_pred EEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCC-CCCCCCCeEEEEEEECCCCchh-hHHHhcccCCC
Q 005360 400 VSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNN-NPDYKIPNVHLICVFKKSADLS-MLNIMLPVSDA 477 (700)
Q Consensus 400 v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~-~~~~~~~~I~Liw~vR~~~~l~-~~d~L~~~~~~ 477 (700)
|.|+||||.+..+..++++++|||||+||||+++++++++++..+ ......++|+|+|++|+.+++. +.++|.++...
T Consensus 1 v~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~~~~w~~~~l~~l~~~ 80 (186)
T 3a1f_A 1 IAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQ 80 (186)
T ss_dssp CCTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTTTTHHHHHHHHHHHHH
T ss_pred CeEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcchHHHHHHHHHHHHHH
Confidence 357899999865446789999999999999999999999876310 0112367999999999999999 66777654320
Q ss_pred Cccc-CCCceEEEEEEeCCC
Q 005360 478 PTEL-SKLQLQIEAYVTRDS 496 (700)
Q Consensus 478 ~~~l-~~~~l~i~iyvTr~~ 496 (700)
..+. ...++++++|+|+++
T Consensus 81 ~~~~~~~~~~~~~~~~t~~~ 100 (186)
T 3a1f_A 81 MQERNNAGFLSYNIYLTGWD 100 (186)
T ss_dssp HHHTTCTTSEEEEEEETTC-
T ss_pred HhhccCCCeEEEEEEEcCCC
Confidence 0000 134799999999874
No 26
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.75 E-value=1.3e-17 Score=171.83 Aligned_cols=191 Identities=6% Similarity=0.044 Sum_probs=135.3
Q ss_pred ccceEEEEEEEecCCeEEEEEeCCCC--c-ccCCCcEEEEEeCCC-CCceeeeeEeecCCCCCCCeEEEEEEeC---CCc
Q 005360 311 RNRARLLSARALPCGVVELNFSKSPG--L-YYNPTSILFVNVPSI-SKLQWHPFTVTSNCNMEQDKLSILVKTE---GSW 383 (700)
Q Consensus 311 ~~~~~vvs~~~l~~~~~~l~~~~~~~--~-~~~pGq~v~L~~p~~-s~~q~HPFTIas~p~~~~~~l~l~IK~~---Gg~ 383 (700)
++..++++++.+++++.++++..++. + .+.||||+.|.+|.. +....||||+++.+. +.+++.++.. |..
T Consensus 8 ~~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~~~~~G~~ 84 (252)
T 2gpj_A 8 PRELEVIRSTYITPHMLRITLGGAGLAGFPADQESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVLHDTDGPA 84 (252)
T ss_dssp CEEEEEEEEEEEETTEEEEEEESGGGTTCCSCCTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEECCSSCCHH
T ss_pred cEEEEEEEEEEcCCCEEEEEEEcCChhhcCCCCCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEEeCCCCcH
Confidence 45678999999999999999987542 2 479999999999853 456889999999763 5777777664 779
Q ss_pred hHHHHhhhccCCCceEEEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCC
Q 005360 384 TQKLYQQISSSVDRLEVSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSA 463 (700)
Q Consensus 384 T~~L~~~~~~~~~~~~v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~ 463 (700)
|+.|.+...+ +++.+.||.|.+..+ ...++++|||||+||||++++++++.. ..++++++.+|+.+
T Consensus 85 S~~l~~l~~G----d~l~v~gP~G~f~l~-~~~~~~lliagGtGitPi~s~l~~l~~---------~~~~~~~~~~~~~~ 150 (252)
T 2gpj_A 85 SSWAKTAQVG----ELIQIGGPGLKKLIN-FEADWFLLAGDMTALPAISVNLAKLPN---------NAVGYAVIEVLSEA 150 (252)
T ss_dssp HHHHHHCCTT----CEEEEEEEECCCCCC-SSSSEEEEEEEGGGHHHHHHHHHHSCT---------TCEEEEEEEESSGG
T ss_pred HHHHhhCCCC----CEEEEecCCCCCcCC-CCCceEEEEcchhhHHHHHHHHHhCCC---------CCcEEEEEEECCHH
Confidence 9999765444 789999999987543 245789999999999999999998732 24788888999987
Q ss_pred chhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhhhhhccCCCCCCCCeEeEeCCcchHHH
Q 005360 464 DLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKELQSIWFKSNPSDSPVSGALGCNSWLWL 533 (700)
Q Consensus 464 ~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~~~~~~~p~~~~~~~~~vcGp~~~~~~ 533 (700)
++.. +. ...+++++...+.+. .... ....+.+...+.+.+...+.+|||++||..
T Consensus 151 d~~~---l~---------~~~~~~v~~~~~~~~-~~~g--~~~~~~l~~~~~~~~~~~vy~CGP~~m~~a 205 (252)
T 2gpj_A 151 DIQP---LV---------HPEHVELHWVINPEA-DPEG--RPLVERIAQLPWLAGEPAVWIACEFNSMRA 205 (252)
T ss_dssp GCCC---CC---------CCTEEEEEEEECSSC-CTTC--HHHHHHHTTSCCCSSCEEEEEEEEHHHHHH
T ss_pred Hhhc---cc---------CCCCcEEEEEeCCCC-Cccc--HHHHHHHHhccCCCCCcEEEEEcCHHHHHH
Confidence 7542 11 123566665544432 1101 122222222222234567899999999854
No 27
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=99.72 E-value=4.4e-18 Score=185.21 Aligned_cols=177 Identities=14% Similarity=0.098 Sum_probs=128.5
Q ss_pred ccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC----------CCchHHHHhhhccCCCceEEEEEc-cC
Q 005360 338 YYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE----------GSWTQKLYQQISSSVDRLEVSVEG-PY 406 (700)
Q Consensus 338 ~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~----------Gg~T~~L~~~~~~~~~~~~v~VeG-Py 406 (700)
+++||||+.+..| .+.|||||+|+|..+++.++|.||.. |..|+.|.+.++. +.++.+.| |.
T Consensus 145 ~~~~Gq~v~l~~~----~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~G~~S~~L~~~l~~---Gd~v~v~~~~~ 217 (374)
T 1ddg_A 145 QLDAEALINLLRP----LTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEE---EGEVRVFIEHN 217 (374)
T ss_dssp CCCHHHHHHHSCB----CCCEEEEBCCCTTTSCSEEEEEEEECEEEETTEEEECHHHHHHHHSCCS---SCEEEEEEECC
T ss_pred CCCHHHHHhhccC----CCCccceecCCCCCCCCEEEEEEEEEEeecCCCCCCCCchHHHHhcCCC---CCEEEEEEeeC
Confidence 6899999988765 48899999999864478999999975 7899999984433 36788998 55
Q ss_pred CCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCC-CchhhHHHhcccCCCCcccCCCc
Q 005360 407 GPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKS-ADLSMLNIMLPVSDAPTELSKLQ 485 (700)
Q Consensus 407 G~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~-~~l~~~d~L~~~~~~~~~l~~~~ 485 (700)
|.+..+....++++|||||+||||++++++++..... ..++.|+|++|+. +|+.+.||+.++.. +...
T Consensus 218 g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~~------~~~~~L~~G~R~~~~d~ly~~El~~~~~-----~~~~ 286 (374)
T 1ddg_A 218 DNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEA------PGKNWLFFGNPHFTEDFLYQVEWQRYVK-----EGVL 286 (374)
T ss_dssp TTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHTC------CSCEEEEEEESCHHHHCTTHHHHHHHHH-----TTSC
T ss_pred CCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcCC------CCCEEEEEEeCCchhhhhHHHHHHHHHH-----hCCC
Confidence 5765433456789999999999999999999887632 4689999999998 78899999987642 3345
Q ss_pred eEEEEEEeCCCCCCCcchhhhhh---hhccCCCCCCCCeEeEeC-CcchHHHH
Q 005360 486 LQIEAYVTRDSEQPKTDTLKELQ---SIWFKSNPSDSPVSGALG-CNSWLWLA 534 (700)
Q Consensus 486 l~i~iyvTr~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~vcG-p~~~~~~~ 534 (700)
.+++..+||+.++.......+.+ .++.. ..+...+.+|| |++|+--.
T Consensus 287 ~~l~~a~Srd~~~k~yVq~~l~~~~~~l~~~--l~~~~~vYvCG~p~~M~~~V 337 (374)
T 1ddg_A 287 TRIDLAWSRDQKEKVYVQDKLREQGAELWRW--INDGAHIYVCGDANRMAKDV 337 (374)
T ss_dssp CEEEEEETTSSSSCCCHHHHHHHTHHHHHHH--HHTTCEEEEEECTTTHHHHH
T ss_pred cEEEEEEecCCCCCccHHHHHHHhHHHHHHH--HhCCcEEEEECCCHHHHHHH
Confidence 68888889875322111111111 11100 01356789999 89987543
No 28
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=99.67 E-value=1.3e-16 Score=174.64 Aligned_cols=179 Identities=16% Similarity=0.162 Sum_probs=125.5
Q ss_pred ccCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC------------CCchHHHHhhhccCCCceEEEEEcc
Q 005360 338 YYNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE------------GSWTQKLYQQISSSVDRLEVSVEGP 405 (700)
Q Consensus 338 ~~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~------------Gg~T~~L~~~~~~~~~~~~v~VeGP 405 (700)
+..++|++.+ +| ..+.|||||+|+|..+++.+++.|+.. |..|+.|.++.. ++.+.+.|+||
T Consensus 156 ~~p~~~~l~~-lp---~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~--Gd~v~v~v~~P 229 (393)
T 4dql_A 156 EMKFSEFIAL-LP---SIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQE--GDTITCFISTP 229 (393)
T ss_dssp CCCHHHHHHT-SC---BCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCT--TCEEEEEEECC
T ss_pred CCCHHHHHHh-CC---CCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCC--cCEEEEEEEcC
Confidence 4556776544 34 458899999999865568899999875 669999998543 45566779999
Q ss_pred CCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECC-CCchhhHHHhcccCCCCcccCCC
Q 005360 406 YGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKK-SADLSMLNIMLPVSDAPTELSKL 484 (700)
Q Consensus 406 yG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~-~~~l~~~d~L~~~~~~~~~l~~~ 484 (700)
+|.+..+....++++|||||+||||+++++++.....+ + ....+++.|+|++|+ .+|..+.+|+.++. +..
T Consensus 230 ~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~-~-g~~~~~v~L~~G~R~~~~d~ly~~el~~~~------~~~ 301 (393)
T 4dql_A 230 QSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKE-Q-GQSLGEAHLYFGCRSPHEDYLYQEELENAQ------SEG 301 (393)
T ss_dssp SSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHH-T-TCCCCCEEEEEEESCTTTCCTTHHHHHHHH------HTT
T ss_pred CCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHh-c-CCCCCCEEEEEEECCcchhhHHHHHHHHHH------hCC
Confidence 99986544456789999999999999999998532211 1 112468999999999 58999999998764 235
Q ss_pred ceEEEEEEeCCCCCCCcchhhhhh----hhccCCCCCCCCeEeEeCCcchHH
Q 005360 485 QLQIEAYVTRDSEQPKTDTLKELQ----SIWFKSNPSDSPVSGALGCNSWLW 532 (700)
Q Consensus 485 ~l~i~iyvTr~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~vcGp~~~~~ 532 (700)
+++++...+|++++...-.+...+ .++. ...+...+.+|||.++|-
T Consensus 302 ~l~l~~a~Sr~~~~~k~yVq~~l~~~~~~l~~--~l~~~~~vYvCGp~~~M~ 351 (393)
T 4dql_A 302 IITLHTAFSRMPNQPKTYVQHVMEQDGKKLIE--LLDQGAHFYICGDGSQMA 351 (393)
T ss_dssp SCEEEEEESSCTTSCCCCHHHHHHHTHHHHHH--HHHTTCEEEEEEETTTHH
T ss_pred CeEEEEEEeCCCCCCCcchhhHHHhCHHHHHH--HHhCCcEEEEECCchhhH
Confidence 678999999865333222221111 1110 012457889999987764
No 29
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=99.62 E-value=2.4e-15 Score=166.83 Aligned_cols=170 Identities=16% Similarity=0.110 Sum_probs=117.9
Q ss_pred CceeeeeEeecCCCCCCCeEEEEEEeC-------------CCchHHHHhhhccCCCceEEEEEc-cCCCCCCCCCCCCeE
Q 005360 354 KLQWHPFTVTSNCNMEQDKLSILVKTE-------------GSWTQKLYQQISSSVDRLEVSVEG-PYGPNSAHFLRHESL 419 (700)
Q Consensus 354 ~~q~HPFTIas~p~~~~~~l~l~IK~~-------------Gg~T~~L~~~~~~~~~~~~v~VeG-PyG~~~~~~~~~~~v 419 (700)
..+.|||||+|+|...++.+++.|+.. |..|+.|.++..+ .++.+.| |.|.+..+....+++
T Consensus 207 ~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~G----d~v~v~~~~~g~F~lp~~~~~pi 282 (435)
T 1f20_A 207 LLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQAD----DVVPCFVRGAPSFHLPRNPQVPC 282 (435)
T ss_dssp BCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCTT----CEEEEEEECCTTSSCCSCTTSCE
T ss_pred CCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCCC----CEEEEEEecCCCccCCCCCCCCE
Confidence 358899999999864467899999863 7789999875443 6799999 666775433446789
Q ss_pred EEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCC-chhhHHHhcccCCCCcccCCCceEEEEEEeCCCCC
Q 005360 420 VMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSA-DLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQ 498 (700)
Q Consensus 420 vlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~-~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~ 498 (700)
+|||||+||||+++++++...... +.....+++.|+|++|+.+ |..+.+|+.++.. ....++++..+||+.++
T Consensus 283 ilIagGtGIAP~~s~l~~~~~~~~-~~~~~~~~~~L~~G~R~~~~d~ly~~El~~~~~-----~~~~~~l~~a~Sr~~~~ 356 (435)
T 1f20_A 283 ILVGPGTGIAPFRSFWQQRQFDIQ-HKGMNPCPMVLVFGCRQSKIDHIYREETLQAKN-----KGVFRELYTAYSREPDR 356 (435)
T ss_dssp EEECCGGGGHHHHHHHHHHHHHHH-HHCCCCCCEEEEEEESCTTTSCTTHHHHHHHHH-----TTSEEEEEEEESSCTTS
T ss_pred EEEECCcCcHHHHHHHHHHHHhhh-hccCCCCCEEEEEeecccccchhHHHHHHHHHH-----cCCccEEEEEECCCCCC
Confidence 999999999999999999876420 0011256899999999997 7788999887642 34456888899998643
Q ss_pred CCcchhhhh-----hhhccCCCCCCCCeEeEeCCcchHHHH
Q 005360 499 PKTDTLKEL-----QSIWFKSNPSDSPVSGALGCNSWLWLA 534 (700)
Q Consensus 499 ~~~~~~~~~-----~~~~~~p~~~~~~~~~vcGp~~~~~~~ 534 (700)
+..-.+... +.+.... ..+...+.+|||++|+--.
T Consensus 357 ~k~yVq~~l~~~l~~~~~~~l-~~~~~~vYvCGp~~M~~~V 396 (435)
T 1f20_A 357 PKKYVQDVLQEQLAESVYRAL-KEQGGHIYVCGDVTMAADV 396 (435)
T ss_dssp CCCCHHHHHHHHSHHHHHHHH-HTSCCEEEEEECHHHHHHH
T ss_pred CCcchhhHHHhhhHHHHHHHH-hcCCcEEEEeCChhHHHHH
Confidence 222111111 1111000 0145678999999987543
No 30
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=99.59 E-value=1.2e-15 Score=172.94 Aligned_cols=187 Identities=17% Similarity=0.168 Sum_probs=123.3
Q ss_pred CCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC-------------CCchHHHHhhhccC-------CCce--
Q 005360 341 PTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE-------------GSWTQKLYQQISSS-------VDRL-- 398 (700)
Q Consensus 341 pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~-------------Gg~T~~L~~~~~~~-------~~~~-- 398 (700)
|+|++...+|. .+.|||||+|+|..+++.++|.||.. |..|+.|.+.+... ..+.
T Consensus 278 p~~~ll~~lp~---l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~~~~~~~~~Gd~~ 354 (539)
T 2qtl_A 278 PLSLLLEHLPK---LQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSG 354 (539)
T ss_dssp CHHHHHHHSCB---CCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC------------
T ss_pred CHHHHHHhCcC---CcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhccccccCCCCCcc
Confidence 55666555663 58899999999854568999999975 77899999984100 0124
Q ss_pred -----EEEEEccCC-CCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCC-CchhhHHHh
Q 005360 399 -----EVSVEGPYG-PNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKS-ADLSMLNIM 471 (700)
Q Consensus 399 -----~v~VeGPyG-~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~-~~l~~~d~L 471 (700)
+|.+.||+| .+..+.....+++||||||||||+++++++.....+.+......++.|+|++|+. +|+.+.||+
T Consensus 355 ~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~R~~~~D~ly~dEL 434 (539)
T 2qtl_A 355 KALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFRKEL 434 (539)
T ss_dssp --CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEESCTTTCCTTHHHH
T ss_pred ccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEECCcchhhHHHHHH
Confidence 899999997 5543333457899999999999999999996432210101135689999999999 799999999
Q ss_pred cccCCCCcccCCCceEEEEEEeCCCCC--CCcchhhhhhhhccC-CC----C-CCCCeEeEeCCc-chHHHHH
Q 005360 472 LPVSDAPTELSKLQLQIEAYVTRDSEQ--PKTDTLKELQSIWFK-SN----P-SDSPVSGALGCN-SWLWLAV 535 (700)
Q Consensus 472 ~~~~~~~~~l~~~~l~i~iyvTr~~~~--~~~~~~~~~~~~~~~-p~----~-~~~~~~~vcGp~-~~~~~~~ 535 (700)
.++.. ....+++++.+||+.++ |....+.+.+.+... +. . .+...+.+|||+ +|+.-..
T Consensus 435 ~~~~~-----~g~~~~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~~M~~~V~ 502 (539)
T 2qtl_A 435 RHFLK-----HGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDVH 502 (539)
T ss_dssp HHHHH-----TTSSCEEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCHHHHHHHH
T ss_pred HHHHH-----hCCCcEEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCHHHHHHHH
Confidence 87652 34456888899987531 111111111111110 00 0 135678999998 8875433
No 31
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=99.57 E-value=2.8e-15 Score=175.00 Aligned_cols=179 Identities=16% Similarity=0.134 Sum_probs=123.7
Q ss_pred CCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEeC-------------CCchHHHHhhhccCCCceEEEEEc-cC
Q 005360 341 PTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKTE-------------GSWTQKLYQQISSSVDRLEVSVEG-PY 406 (700)
Q Consensus 341 pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~~-------------Gg~T~~L~~~~~~~~~~~~v~VeG-Py 406 (700)
|+||+...+|. .+.|||||+|+|...++.+++.|++. |..|+.|.++..+ .++.+.| |.
T Consensus 418 p~~~l~~~lp~---l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~l~~G----d~v~v~~~p~ 490 (688)
T 1tll_A 418 PATLLLTQLSL---LQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQAD----DVVPCFVRGA 490 (688)
T ss_dssp CHHHHHHHSCB---CCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTTCCTT----SEEEEEEECC
T ss_pred CHHHHHHhCcc---cceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHhCCCC----CEEEEEeccC
Confidence 56666555663 58899999999864367899999864 6789999875443 6789999 66
Q ss_pred CCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCC-chhhHHHhcccCCCCcccCCCc
Q 005360 407 GPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSA-DLSMLNIMLPVSDAPTELSKLQ 485 (700)
Q Consensus 407 G~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~-~l~~~d~L~~~~~~~~~l~~~~ 485 (700)
|.+..+.....+++|||||+||||++++++++..... +.....+++.|+|++|+.+ |..+.+|+.++.. ....
T Consensus 491 g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~-~~~~~~~~v~L~~G~R~~~~D~ly~dEL~~~~~-----~~~~ 564 (688)
T 1tll_A 491 PSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQ-HKGMNPCPMVLVFGCRQSKIDHIYREETLQAKN-----KGVF 564 (688)
T ss_dssp GGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHH-HSCCCCCCEEEEEEESCTTTTCTTHHHHHHHHH-----TTSE
T ss_pred CCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhh-hccCCCCCEEEEEEeccchhhhhHHHHHHHHHH-----cCCc
Confidence 6765433346789999999999999999999876421 0011357899999999998 7888999886642 3445
Q ss_pred eEEEEEEeCCCCCCCcchhhh-h----hhhccCCCCCCCCeEeEeCCcchHHH
Q 005360 486 LQIEAYVTRDSEQPKTDTLKE-L----QSIWFKSNPSDSPVSGALGCNSWLWL 533 (700)
Q Consensus 486 l~i~iyvTr~~~~~~~~~~~~-~----~~~~~~p~~~~~~~~~vcGp~~~~~~ 533 (700)
++++..+||+.+++..-.+.. . ..+.... ..+...+.+|||++|+.-
T Consensus 565 ~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l-~~~~~~vYvCGp~~M~~~ 616 (688)
T 1tll_A 565 RELYTAYSREPDRPKKYVQDVLQEQLAESVYRAL-KEQGGHIYVCGDVTMAAD 616 (688)
T ss_dssp EEEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHH-HTSCCEEEEEEEHHHHHH
T ss_pred eEEEEEECCCCCCCccchhhhhHHhHHHHHHHhh-ccCCcEEEEeCCHHHHHH
Confidence 788889999864332211111 1 1111000 024567899999998754
No 32
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=99.53 E-value=3.6e-15 Score=174.07 Aligned_cols=188 Identities=13% Similarity=0.120 Sum_probs=128.2
Q ss_pred cCCCcEEEEEeCCCCCceeeeeEeecCCCCCCCeEEEEEEe--------------CCCchHHHHhhhccC--------CC
Q 005360 339 YNPTSILFVNVPSISKLQWHPFTVTSNCNMEQDKLSILVKT--------------EGSWTQKLYQQISSS--------VD 396 (700)
Q Consensus 339 ~~pGq~v~L~~p~~s~~q~HPFTIas~p~~~~~~l~l~IK~--------------~Gg~T~~L~~~~~~~--------~~ 396 (700)
-.|+||+...+|. .+.|||||+|+|..+++.++|.|+. .|..|+.|.++..+. ..
T Consensus 414 ~~p~~~l~~~lp~---l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~g~~~~~~~~~~~ 490 (682)
T 2bpo_A 414 TVPMQFLVESVPQ---MTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQLAQNNVNIAETNL 490 (682)
T ss_dssp TSCHHHHHHHSCB---CCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHHHHTTCCTTTSCC
T ss_pred CCCHHHHHHhCcc---cccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhccccccccccccccc
Confidence 4688988777774 5889999999986546888888754 478999999866521 11
Q ss_pred ceEEEEEccCCCCC--------------CCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCC----CCCCCCCeEEEEEE
Q 005360 397 RLEVSVEGPYGPNS--------------AHFLRHESLVMVSGGSGISPFISIVRELIFQSNN----NPDYKIPNVHLICV 458 (700)
Q Consensus 397 ~~~v~VeGPyG~~~--------------~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~----~~~~~~~~I~Liw~ 458 (700)
+..+.++||+|.+. .+.....+++||||||||||+++++++...+... +......++.|+|+
T Consensus 491 G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~~L~fG 570 (682)
T 2bpo_A 491 PVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFYG 570 (682)
T ss_dssp CCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCEEEEEE
T ss_pred ccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCEEEEEe
Confidence 46799999999961 1112356899999999999999999998764310 01123568999999
Q ss_pred ECCCCchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCCCcchhhhh----hhhccCCCCCCCCeEeEeCC-cchHHH
Q 005360 459 FKKSADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQPKTDTLKEL----QSIWFKSNPSDSPVSGALGC-NSWLWL 533 (700)
Q Consensus 459 vR~~~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~vcGp-~~~~~~ 533 (700)
+|+.+|+.+.||+.++.. ....+++++..+||+++....-.+... +.++.. ..+...+.+||| ++|+.-
T Consensus 571 ~R~~~D~ly~dEl~~~~~----~~g~~~~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~--l~~~~~vYvCGpa~~M~~~ 644 (682)
T 2bpo_A 571 SRNTDDFLYQDEWPEYAK----KLDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEM--INNGAFIYVCGDAKGMAKG 644 (682)
T ss_dssp ESSSSSCTTTTTHHHHHH----HHGGGEEEEEEESCCTTSCCCCHHHHHHHTHHHHHHH--HTTTCEEEEEECSTTHHHH
T ss_pred cCChhhhhhHHHHHHHHH----hcCCceEEEEEECCCCCCCCcchHHHHHhhHHHHHHH--HhCCcEEEEeCCchHhHHH
Confidence 999999999999876531 123568899999995422221111111 111100 014577899999 788754
Q ss_pred HH
Q 005360 534 AV 535 (700)
Q Consensus 534 ~~ 535 (700)
..
T Consensus 645 V~ 646 (682)
T 2bpo_A 645 VS 646 (682)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 33
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=99.50 E-value=7.1e-14 Score=155.27 Aligned_cols=170 Identities=15% Similarity=0.190 Sum_probs=115.9
Q ss_pred CceeeeeEeecCCCCCCCeEEEEEEe-----------CCCchHHHHhhhccC--CCceEEEEEccCCCCCCCCCCCCeEE
Q 005360 354 KLQWHPFTVTSNCNMEQDKLSILVKT-----------EGSWTQKLYQQISSS--VDRLEVSVEGPYGPNSAHFLRHESLV 420 (700)
Q Consensus 354 ~~q~HPFTIas~p~~~~~~l~l~IK~-----------~Gg~T~~L~~~~~~~--~~~~~v~VeGPyG~~~~~~~~~~~vv 420 (700)
..+.|+|||+|+|..+++.+++.|+. .|..|+.|.+...+. ++..++.+.||+|.+..+.....+++
T Consensus 231 ~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~gg~~~~~~~v~v~~p~g~F~lp~~~~~piI 310 (458)
T 3qfs_A 231 RLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVI 310 (458)
T ss_dssp BCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCSSCSSCCCCEEEEEEECCSCCCCSSTTSCEE
T ss_pred CCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhccCCccCCceEEEEEecCCCcccCCCCCCceE
Confidence 56889999999986556889998864 377999999987651 11236999999998765444467999
Q ss_pred EEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCC-CchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCC
Q 005360 421 MVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKS-ADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQP 499 (700)
Q Consensus 421 lIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~-~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~ 499 (700)
|||||+||||+++++++.....+ + .....++.|+|++|+. +|+.+.+|+.++.. +....+++..++|+.++.
T Consensus 311 mIggGTGIAPfrs~lq~r~~l~~-~-g~~~~~~~Lf~G~R~~~~D~ly~dEl~~l~~-----~g~l~~l~~a~SRd~~~k 383 (458)
T 3qfs_A 311 MVGPGTGVAPFIGFIQERAWLRQ-Q-GKEVGETLLYYGCRRSDEDYLYREELAQFHR-----DGALTQLNVAFSREQSHK 383 (458)
T ss_dssp EECCGGGGHHHHHHHHHHHHHHH-H-TCCCCCEEEEEEESCTTTSCTTHHHHHHHHH-----HTSSSEEEEEETTSSSSC
T ss_pred EEcCCcchhhHHHHHHHHHHHHh-c-CCCCCCEEEEEEeCCchHhhhHHHHHHHHHH-----cCCCCEEEEEEECCCCCc
Confidence 99999999999999998642110 0 0124689999999996 79999999987652 222347888888875321
Q ss_pred C-cchhhhh--hhhccCCCCCCCCeEeEeCCc-chHH
Q 005360 500 K-TDTLKEL--QSIWFKSNPSDSPVSGALGCN-SWLW 532 (700)
Q Consensus 500 ~-~~~~~~~--~~~~~~p~~~~~~~~~vcGp~-~~~~ 532 (700)
. .++.... ..++.- ..+...+.+|||+ .|..
T Consensus 384 ~yVqd~l~~~~~~l~~~--l~~~~~vYvCGp~~~M~~ 418 (458)
T 3qfs_A 384 VYVQHLLKQDREHLWKL--IEGGAHIYVCGDARNMAR 418 (458)
T ss_dssp CCHHHHHHHTHHHHHHH--HHTTCEEEEEEETTTHHH
T ss_pred ccHhHHHHHhHHHHHHH--hcCCCEEEEECCCHHHHH
Confidence 1 1111100 011100 0246789999997 5643
No 34
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=99.46 E-value=9.8e-14 Score=160.22 Aligned_cols=171 Identities=15% Similarity=0.181 Sum_probs=117.3
Q ss_pred CceeeeeEeecCCCCCCCeEEEEEEe-----------CCCchHHHHhhhc-cC-CCceEEEEEccCCCCCCCCCCCCeEE
Q 005360 354 KLQWHPFTVTSNCNMEQDKLSILVKT-----------EGSWTQKLYQQIS-SS-VDRLEVSVEGPYGPNSAHFLRHESLV 420 (700)
Q Consensus 354 ~~q~HPFTIas~p~~~~~~l~l~IK~-----------~Gg~T~~L~~~~~-~~-~~~~~v~VeGPyG~~~~~~~~~~~vv 420 (700)
..+.|||||+|+|...++.+++.|+. .|..|+.|+++.. +. +...++.+.||+|++..+.....+++
T Consensus 391 ~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd~~~~~~v~v~~p~g~F~lp~~~~~pii 470 (618)
T 3qe2_A 391 RLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVI 470 (618)
T ss_dssp BCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC-----CCEEEEEEECCSCCCCSSTTSCEE
T ss_pred ccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCCCCcceEEEEEEecCcccCCCCCCCCeE
Confidence 46889999999986556788888754 3789999999876 30 01137999999998765444567899
Q ss_pred EEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCC-CchhhHHHhcccCCCCcccCCCceEEEEEEeCCCCCC
Q 005360 421 MVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKS-ADLSMLNIMLPVSDAPTELSKLQLQIEAYVTRDSEQP 499 (700)
Q Consensus 421 lIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~-~~l~~~d~L~~~~~~~~~l~~~~l~i~iyvTr~~~~~ 499 (700)
||||||||||+++++++...... + ....+++.|+|++|+. +|+.+.+|+.++.. .....+++...+|+.++.
T Consensus 471 mIg~GtGIAPfrs~l~~r~~~~~-~-g~~~~~~~L~~G~R~~~~D~ly~~el~~~~~-----~g~l~~l~~a~Srd~~~k 543 (618)
T 3qe2_A 471 MVGPGTGVAPFIGFIQERAWLRQ-Q-GKEVGETLLYYGCRRSDEDYLYREELAQFHR-----DGALTQLNVAFSREQSHK 543 (618)
T ss_dssp EECCGGGGHHHHHHHHHHHHHHH-T-TCCCCCEEEEEEESCTTTSCTTHHHHHHHHH-----HTSSSEEEEEETTSSSSC
T ss_pred EEcCCcchhhHHHHHHHHHHHHh-c-CCCCCCEEEEEecCCCccccchHHHHHHHHh-----cCCCcEEEEEEcCCCCCC
Confidence 99999999999999999875321 1 1124689999999999 59999999987642 222338888889875332
Q ss_pred C-cchhhh--hhhhccCCCCCCCCeEeEeCCc-chHHH
Q 005360 500 K-TDTLKE--LQSIWFKSNPSDSPVSGALGCN-SWLWL 533 (700)
Q Consensus 500 ~-~~~~~~--~~~~~~~p~~~~~~~~~vcGp~-~~~~~ 533 (700)
. .++... ...++. ...+...+.+|||+ +|+.-
T Consensus 544 ~yVqd~l~~~~~~l~~--~l~~~a~vYvCGp~~~M~~~ 579 (618)
T 3qe2_A 544 VYVQHLLKQDREHLWK--LIEGGAHIYVCGDARNMARD 579 (618)
T ss_dssp CCHHHHHHHTHHHHHH--HHHHTCEEEEEEETTTHHHH
T ss_pred CcHHHHHHHhHHHHHH--HHhCCcEEEEECCchHHHHH
Confidence 1 111110 001110 00245689999997 77644
No 35
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.44 E-value=4.9e-14 Score=132.43 Aligned_cols=117 Identities=9% Similarity=0.026 Sum_probs=74.9
Q ss_pred EEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchhhHHHhcccCCCCc
Q 005360 400 VSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLSMLNIMLPVSDAPT 479 (700)
Q Consensus 400 v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~~~d~L~~~~~~~~ 479 (700)
+.++||||++.+ ....+++++||||+||||++++++++.++ ..+++++ ++|+++++.+.|++.++..
T Consensus 3 ~~v~GP~G~~~~-~~~~~~~llIaGG~GiaPl~sm~~~l~~~--------~~~v~l~-g~R~~~~~~~~~el~~l~~--- 69 (142)
T 3lyu_A 3 LNVAGPLGTPVP-MEKFGKILAIGAYTGIVEVYPIAKAWQEI--------GNDVTTL-HVTFEPMVILKEELEKAVT--- 69 (142)
T ss_dssp ----CCCSCCBC-CCCCSEEEEEEETTHHHHHHHHHHHHHHT--------TCEEEEE-EEEEGGGCCSHHHHHTTSS---
T ss_pred eeeeCCCCCCcc-CCCCCeEEEEECcCcHHHHHHHHHHHHhc--------CCcEEEE-EeCCHHHhhHHHHHHHHHh---
Confidence 568999999875 34578999999999999999999998764 2479999 9999999999999976431
Q ss_pred ccCCCceEEEEEEeCCCCCCC----cchhhhhhhhcc-CCCCCCCCeEeEeCCcchHHHHH
Q 005360 480 ELSKLQLQIEAYVTRDSEQPK----TDTLKELQSIWF-KSNPSDSPVSGALGCNSWLWLAV 535 (700)
Q Consensus 480 ~l~~~~l~i~iyvTr~~~~~~----~~~~~~~~~~~~-~p~~~~~~~~~vcGp~~~~~~~~ 535 (700)
++.+..+++++.++.+ ...+...+.+.. .+.. +...+.+|||++||..+.
T Consensus 70 -----~~~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~~~~~~-~~~~vy~CGP~~Mm~av~ 124 (142)
T 3lyu_A 70 -----RHIVEPVPLNPNQDFLANMKNVSQRLKEKVRELLESE-DWDLVFMVGPVGDQKQVF 124 (142)
T ss_dssp -----EEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHSS-CCSEEEEESCHHHHHHHH
T ss_pred -----heEEEEeecccccCCCCCCCCCccchhHHHHHhcccC-CCCEEEEECCHHHHHHHH
Confidence 2333322333321111 111212221111 1111 345789999999986544
No 36
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.36 E-value=1.2e-13 Score=131.99 Aligned_cols=68 Identities=12% Similarity=0.131 Sum_probs=53.7
Q ss_pred eE-EEEEccCCCCCCCCCCCCeEEEEEcCCChhhHHHHHHHHHHhcCCCCCCCCCeEEEEEEECCCCchhhHHHhcccC
Q 005360 398 LE-VSVEGPYGPNSAHFLRHESLVMVSGGSGISPFISIVRELIFQSNNNPDYKIPNVHLICVFKKSADLSMLNIMLPVS 475 (700)
Q Consensus 398 ~~-v~VeGPyG~~~~~~~~~~~vvlIAGG~GITp~lsil~~l~~~~~~~~~~~~~~I~Liw~vR~~~~l~~~d~L~~~~ 475 (700)
++ +.++||+|++.+ ....++++|||||+||||++++++++.++ .++++|+ ++|+.+++.+.|++.++.
T Consensus 5 d~vl~v~gP~G~~f~-~~~~~~~llIaGG~GItPl~sm~~~l~~~--------~~~v~l~-g~r~~~d~~~~~el~~l~ 73 (158)
T 3lrx_A 5 DSLLNVAGPLGTPVP-MEKFGKILAIGAYTGIVEVYPIAKAWQEI--------GNDVTTL-HVTFEPMVILKEELEKAV 73 (158)
T ss_dssp -------CCCCCCBC-CCCCSEEEEEEETTHHHHHHHHHHHHHHH--------TCEEEEE-EECBGGGCCSHHHHHHHS
T ss_pred CEeeEEECCCCCCCc-cCCCCeEEEEEccCcHHHHHHHHHHHHhc--------CCcEEEE-EeCCHHHhhHHHHHHHHH
Confidence 67 599999999764 34678999999999999999999999764 2489999 999999999999997653
No 37
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=93.56 E-value=0.048 Score=51.14 Aligned_cols=30 Identities=13% Similarity=0.191 Sum_probs=24.2
Q ss_pred EEEEeCCcchHHHHHHHHhcCCCC-ceEEee
Q 005360 666 GVLVCGPRKMRHEVAKICSSGLAD-NLHFES 695 (700)
Q Consensus 666 gV~vcGP~~m~~~va~~c~~~~~~-~~hf~s 695 (700)
-||+|||+.|+++|++.+++.+.+ .+|+|.
T Consensus 115 ~vy~CGP~~mm~~v~~~l~~~Gv~~~vslE~ 145 (158)
T 3lrx_A 115 LVFMVGPVGDQKQVFEVVKEYGVPMKVDLHP 145 (158)
T ss_dssp EEEEESCHHHHHHHHHHHGGGTCCEEECC--
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCEEEEeeH
Confidence 399999999999999999997764 466664
No 38
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=93.48 E-value=0.024 Score=56.20 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=28.7
Q ss_pred eeEEEEeCCcchHHHHHHHH-hcCCC--CceEEeeccc
Q 005360 664 DVGVLVCGPRKMRHEVAKIC-SSGLA--DNLHFESISF 698 (700)
Q Consensus 664 ~vgV~vcGP~~m~~~va~~c-~~~~~--~~~hf~s~~f 698 (700)
+.-|++|||+.|+++|++.+ ++.+. .++|+|+++|
T Consensus 194 ~~~vyvCGp~~m~~~v~~~l~~~~g~~~~~i~~E~F~~ 231 (232)
T 1qfj_A 194 EHDIYIAGRFEMAKIARDLFCSERNAREDRLFGDAFAF 231 (232)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHSCCCGGGEECTHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHHcCCCHHHEEEeeecc
Confidence 44599999999999999998 77665 5788887764
No 39
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=92.47 E-value=0.077 Score=48.84 Aligned_cols=26 Identities=19% Similarity=0.169 Sum_probs=23.1
Q ss_pred EEEEeCCcchHHHHHHHHhcCCCCce
Q 005360 666 GVLVCGPRKMRHEVAKICSSGLADNL 691 (700)
Q Consensus 666 gV~vcGP~~m~~~va~~c~~~~~~~~ 691 (700)
-||+|||+.|+++|++.+++.+.+.+
T Consensus 110 ~vy~CGP~~Mm~av~~~l~~~~~~~~ 135 (142)
T 3lyu_A 110 LVFMVGPVGDQKQVFEVVKEYGVPML 135 (142)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCCBC
T ss_pred EEEEECCHHHHHHHHHHHHHcCCchh
Confidence 39999999999999999999877654
No 40
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=91.96 E-value=0.071 Score=54.70 Aligned_cols=33 Identities=24% Similarity=0.475 Sum_probs=28.4
Q ss_pred eeEEEEeCCcchHHHHHHHHhcCCC--CceEEeec
Q 005360 664 DVGVLVCGPRKMRHEVAKICSSGLA--DNLHFESI 696 (700)
Q Consensus 664 ~vgV~vcGP~~m~~~va~~c~~~~~--~~~hf~s~ 696 (700)
+.-|++|||+.|+++|.+.+++.+. +++|+|++
T Consensus 255 ~~~vyvCGp~~m~~~v~~~l~~~G~~~~~i~~e~F 289 (290)
T 2r6h_A 255 DIEYYMCGPGPMANAVKGMLENLGVPRNMLFFDDF 289 (290)
T ss_dssp GEEEEEECCHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred CcEEEEECCHHHHHHHHHHHHHcCCCHHHEEeccc
Confidence 4569999999999999999998555 67999876
No 41
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=90.69 E-value=0.12 Score=52.26 Aligned_cols=44 Identities=7% Similarity=0.016 Sum_probs=32.9
Q ss_pred hHHHHhhc--CCCeeEEEEeCCcchHHHHHHHHh-cCCC--CceEEeec
Q 005360 653 LNKILLDV--KGTDVGVLVCGPRKMRHEVAKICS-SGLA--DNLHFESI 696 (700)
Q Consensus 653 ~~~i~~~~--~~~~vgV~vcGP~~m~~~va~~c~-~~~~--~~~hf~s~ 696 (700)
+.+.+.+. ...+--|++|||+.|+++|++.++ +.+. +++|+|.+
T Consensus 178 ~~~~l~~~~~~~~~~~vy~CGP~~m~~av~~~l~~~~G~~~~~i~~e~f 226 (252)
T 2gpj_A 178 LVERIAQLPWLAGEPAVWIACEFNSMRALRRHFKQAHALPKSHFYTSSY 226 (252)
T ss_dssp HHHHHTTSCCCSSCEEEEEEEEHHHHHHHHHHHHHHCCCCGGGEEEEEE
T ss_pred HHHHHHhccCCCCCcEEEEEcCHHHHHHHHHHHHHhcCCCHHHeEEEEE
Confidence 55665553 123445999999999999999998 5444 67999986
No 42
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=89.19 E-value=0.16 Score=53.53 Aligned_cols=35 Identities=31% Similarity=0.456 Sum_probs=29.2
Q ss_pred eeEEEEeCCcchHHHHHHHHhcCCC--CceEEeeccc
Q 005360 664 DVGVLVCGPRKMRHEVAKICSSGLA--DNLHFESISF 698 (700)
Q Consensus 664 ~vgV~vcGP~~m~~~va~~c~~~~~--~~~hf~s~~f 698 (700)
+.-|++|||+.|.++|.+.+++.+. .++|+|++..
T Consensus 301 ~~~vy~CGp~~m~~~v~~~l~~~G~~~~~i~~e~F~~ 337 (338)
T 1krh_A 301 EVDVYLCGPVPMVEAVRSWLDTQGIQPANFLFEKFSA 337 (338)
T ss_dssp CSEEEEEEEHHHHHHHHHHHHHHTCCCSEEEEEEECC
T ss_pred CcEEEEECCHHHHHHHHHHHHHcCCCHHHEEEEeecC
Confidence 3459999999999999999988655 5799988754
No 43
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=86.42 E-value=0.43 Score=48.43 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=28.0
Q ss_pred CeeEEEEeCCcchHHHHHHHHhcCCC--------CceEEeec
Q 005360 663 TDVGVLVCGPRKMRHEVAKICSSGLA--------DNLHFESI 696 (700)
Q Consensus 663 ~~vgV~vcGP~~m~~~va~~c~~~~~--------~~~hf~s~ 696 (700)
++--|++|||+.|+++|.+.+++.+. ..+|+|.+
T Consensus 225 ~~~~vyvCGp~~m~~~v~~~l~~~G~~~~~i~~~~~i~~E~f 266 (272)
T 2bgi_A 225 ETDRAMVCGSLAFNVDVMKVLESYGLREGANSEPREFVVEKA 266 (272)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHTTTCCBCBTTBCBSEEEEES
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCCChHHcCCccceEeeee
Confidence 44569999999999999999998664 45888875
No 44
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=83.61 E-value=0.73 Score=47.78 Aligned_cols=38 Identities=21% Similarity=0.404 Sum_probs=27.8
Q ss_pred cCCCChHHHHhhc--------CCCeeEEEEeCCcchHHHHHHHHhc
Q 005360 648 GERPNLNKILLDV--------KGTDVGVLVCGPRKMRHEVAKICSS 685 (700)
Q Consensus 648 G~Rp~~~~i~~~~--------~~~~vgV~vcGP~~m~~~va~~c~~ 685 (700)
|+|...++.+.+. ...+..||+|||+.|+++|.+.+.+
T Consensus 238 g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGp~~M~~~v~~~L~~ 283 (310)
T 3vo2_A 238 GEKMYIQTRMAEYREELWELLKKDNTYVYMCGLKGMEKGIDDIMLN 283 (310)
T ss_dssp CCBCCHHHHHHTTHHHHHHHHTSTTEEEEEEESTTHHHHHHHHHHH
T ss_pred CcceehHHHHHHHHHHHHHhcccCCcEEEEeCCHHHHHHHHHHHHH
Confidence 4455566655542 3456779999999999999888875
No 45
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=83.24 E-value=0.81 Score=47.32 Aligned_cols=38 Identities=11% Similarity=0.227 Sum_probs=26.3
Q ss_pred cCCCChHHHHhhc-------CCCeeEEEEeCCcchHHHHHHHHhc
Q 005360 648 GERPNLNKILLDV-------KGTDVGVLVCGPRKMRHEVAKICSS 685 (700)
Q Consensus 648 G~Rp~~~~i~~~~-------~~~~vgV~vcGP~~m~~~va~~c~~ 685 (700)
|+|...++.+.+. -+++..|++|||+.|+++|.+.+++
T Consensus 240 g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp~~m~~~v~~~L~~ 284 (311)
T 3lo8_A 240 GGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGLKGMMPGIQDTLKK 284 (311)
T ss_dssp ---CCHHHHHHHTHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHH
T ss_pred CCcceehHHHHHHHHHHHHhhcCCcEEEEECCHHHHHHHHHHHHH
Confidence 5567777776643 0234569999999999999887776
No 46
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=82.89 E-value=0.67 Score=45.94 Aligned_cols=30 Identities=20% Similarity=0.385 Sum_probs=24.3
Q ss_pred CeeEEEEeCCcchHHHHHHHHhcCCC--CceE
Q 005360 663 TDVGVLVCGPRKMRHEVAKICSSGLA--DNLH 692 (700)
Q Consensus 663 ~~vgV~vcGP~~m~~~va~~c~~~~~--~~~h 692 (700)
.+.-|++|||+.|+++|.+.+++.+. +++|
T Consensus 210 ~~~~vy~CGp~~m~~~v~~~l~~~G~~~~~i~ 241 (243)
T 2eix_A 210 SDIKVMMCGPPMMNKAMQGHLETLGYTPEQWF 241 (243)
T ss_dssp SSEEEEEESSHHHHHHHHHHHHHHTCCGGGEE
T ss_pred CCeEEEEECCHHHHHHHHHHHHHcCCCHHHEE
Confidence 45569999999999999999998655 4454
No 47
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=82.14 E-value=0.85 Score=45.95 Aligned_cols=45 Identities=20% Similarity=0.291 Sum_probs=31.4
Q ss_pred CCChHHHHhhcCCCeeEEEEeCCcchHHHHHHHHhcCCCC-ceEEee
Q 005360 650 RPNLNKILLDVKGTDVGVLVCGPRKMRHEVAKICSSGLAD-NLHFES 695 (700)
Q Consensus 650 Rp~~~~i~~~~~~~~vgV~vcGP~~m~~~va~~c~~~~~~-~~hf~s 695 (700)
+-.+++++.+.....--|++|||+.|+++|.+ +++.+.+ .+++|+
T Consensus 177 ~g~v~~~l~~~~~~~~~vyvCGp~~m~~~v~~-l~~~gv~~~vs~e~ 222 (262)
T 1ep3_B 177 KGHVGMLMNEIDFEVDALYTCGAPAMLKAVAK-KYDQLERLYISMES 222 (262)
T ss_dssp ESCHHHHHHHCCSCCSEEEEESCHHHHHHHHH-HTTTCSSEEEECCC
T ss_pred eeehHHHHHhhccCCCEEEEECCHHHHHHHHH-HHhCCCCEEEEecc
Confidence 44577777764222335999999999999999 8876653 455543
No 48
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=79.99 E-value=0.89 Score=45.15 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=25.8
Q ss_pred CeeEEEEeCCcchHHHHHHHH-hcCCC--------CceEEee
Q 005360 663 TDVGVLVCGPRKMRHEVAKIC-SSGLA--------DNLHFES 695 (700)
Q Consensus 663 ~~vgV~vcGP~~m~~~va~~c-~~~~~--------~~~hf~s 695 (700)
.+.-|++|||+.|+++|.+.+ ++.+. ..+|+|.
T Consensus 205 ~~~~vy~CGp~~m~~~v~~~l~~~~G~~~~~i~~~~~~~~E~ 246 (248)
T 1fdr_A 205 ETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPGHMTAEH 246 (248)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHHHHCCCBCBTTBCCSEEEEE
T ss_pred cCCEEEEeCCHHHHHHHHHHHHHHcCCChHHcCCCccEEEEe
Confidence 445699999999999999999 77433 3477775
No 49
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=77.71 E-value=0.52 Score=48.88 Aligned_cols=30 Identities=20% Similarity=0.413 Sum_probs=25.0
Q ss_pred EEEe-CCcchHHHHHHHHhcCCCCceEEeec
Q 005360 667 VLVC-GPRKMRHEVAKICSSGLADNLHFESI 696 (700)
Q Consensus 667 V~vc-GP~~m~~~va~~c~~~~~~~~hf~s~ 696 (700)
+++| ||+.|.++|.+.+.+.+..++|+|.+
T Consensus 269 ~yvCGGp~~m~~~v~~~L~~~g~~~i~~e~f 299 (314)
T 2rc5_A 269 FYICGGPKGMEKGVIEEIQKISGNTGTYEEF 299 (314)
T ss_dssp EEEEESSTTTHHHHHHHHHHHHTCCSCHHHH
T ss_pred EEEeCCcHHHHHHHHHHHHHHHhccchHHHH
Confidence 5999 99999999999998855567777653
No 50
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=76.35 E-value=1.8 Score=44.44 Aligned_cols=37 Identities=22% Similarity=0.463 Sum_probs=25.1
Q ss_pred cCCCChHHHHhh--------cCCCeeEEEEeCCcchHHHHHHHHh
Q 005360 648 GERPNLNKILLD--------VKGTDVGVLVCGPRKMRHEVAKICS 684 (700)
Q Consensus 648 G~Rp~~~~i~~~--------~~~~~vgV~vcGP~~m~~~va~~c~ 684 (700)
|+|...++.+.+ ..+.+--|++|||+.|.++|.++++
T Consensus 232 ~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp~~m~~~v~~~l~ 276 (304)
T 2bmw_A 232 GGRMYIQDRVAEHADQLWQLIKNQKTHTYICGPPPMEEGIDAALS 276 (304)
T ss_dssp SSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECTTHHHHHHHHHH
T ss_pred CCcceehHHHHHhHHHHHHHhhcCCcEEEEECCHHHHHHHHHHHH
Confidence 446666666543 1233445999999999999876664
No 51
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=75.50 E-value=2 Score=46.31 Aligned_cols=38 Identities=13% Similarity=0.351 Sum_probs=27.7
Q ss_pred cCCCChHHHHhhc--------CCCeeEEEEeCCcchHHHHHHHHhc
Q 005360 648 GERPNLNKILLDV--------KGTDVGVLVCGPRKMRHEVAKICSS 685 (700)
Q Consensus 648 G~Rp~~~~i~~~~--------~~~~vgV~vcGP~~m~~~va~~c~~ 685 (700)
|+|...++.+.+. ...+--||+|||+.|.++|.+.+.+
T Consensus 330 g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP~~M~~~v~~~L~~ 375 (402)
T 2b5o_A 330 GGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLKGMQPPIDETFTA 375 (402)
T ss_dssp SCBCCHHHHHHHTHHHHHHHHTSTTEEEEEEECGGGHHHHHHHHHH
T ss_pred CCccchHHHHHHhHHHHHHHhccCCcEEEEECCHHHHHHHHHHHHH
Confidence 4566677666542 1234459999999999999998876
No 52
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=75.38 E-value=2 Score=44.38 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=25.9
Q ss_pred cCCCChHHHHhh--------cCCCeeEEEEeCCcchHHHHHHHHhc
Q 005360 648 GERPNLNKILLD--------VKGTDVGVLVCGPRKMRHEVAKICSS 685 (700)
Q Consensus 648 G~Rp~~~~i~~~--------~~~~~vgV~vcGP~~m~~~va~~c~~ 685 (700)
|+|-..++.+.+ ....+--||+|||+.|+++|.+.+.+
T Consensus 242 g~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp~~m~~~v~~~L~~ 287 (314)
T 1fnb_A 242 GEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGLKGMEKGIDDIMVS 287 (314)
T ss_dssp CCBCCHHHHHHTTHHHHHHHTTSTTEEEEEEECTTHHHHHHHHHHH
T ss_pred CCceechHHHHHhHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHH
Confidence 445566666553 22234459999999999999876654
No 53
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=65.80 E-value=1.9 Score=43.39 Aligned_cols=25 Identities=24% Similarity=0.248 Sum_probs=21.0
Q ss_pred eeEEEEeCCcchHH-HHHHHHhcCCC
Q 005360 664 DVGVLVCGPRKMRH-EVAKICSSGLA 688 (700)
Q Consensus 664 ~vgV~vcGP~~m~~-~va~~c~~~~~ 688 (700)
+.-|++|||+.|++ +|.+.+.+.+.
T Consensus 242 ~~~vyvCGp~~m~~~~v~~~L~~~G~ 267 (275)
T 1umk_A 242 EPLVLMCGPPPMIQYACLPNLDHVGH 267 (275)
T ss_dssp CCEEEEESCHHHHHHTTHHHHHHHTC
T ss_pred CeEEEEECCHHHHHHHHHHHHHHcCC
Confidence 44599999999999 89888887555
No 54
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=62.70 E-value=2.5 Score=42.39 Aligned_cols=30 Identities=23% Similarity=0.236 Sum_probs=22.4
Q ss_pred eeEEEEeCCcchHHH-HHHHHhcCCC--CceEE
Q 005360 664 DVGVLVCGPRKMRHE-VAKICSSGLA--DNLHF 693 (700)
Q Consensus 664 ~vgV~vcGP~~m~~~-va~~c~~~~~--~~~hf 693 (700)
+.-|++|||+.|+++ +.+...+.+. ++.||
T Consensus 236 ~~~vyvCGp~~m~~~~~~~~L~~~G~~~~~i~~ 268 (270)
T 2cnd_A 236 DTLALACGPPPMIQFAISPNLEKMKYDMANSFV 268 (270)
T ss_dssp SEEEEEECCHHHHHTTTHHHHHTTTCCHHHHEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHHcCCChhhcEE
Confidence 445999999999997 5778887665 34544
No 55
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=60.66 E-value=3 Score=48.35 Aligned_cols=39 Identities=28% Similarity=0.317 Sum_probs=28.4
Q ss_pred ceEEEEEEEecC-----CeEEEEEeCC--CCcccCCCcEEEEEeCC
Q 005360 313 RARLLSARALPC-----GVVELNFSKS--PGLYYNPTSILFVNVPS 351 (700)
Q Consensus 313 ~~~vvs~~~l~~-----~~~~l~~~~~--~~~~~~pGq~v~L~~p~ 351 (700)
..++++.+.++. ++..++|..+ .+..|+||+|+-|....
T Consensus 253 ~a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~P~N 298 (688)
T 1tll_A 253 AARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGN 298 (688)
T ss_dssp EEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCC
T ss_pred EEEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCCEEEEecCC
Confidence 356777777753 5777888764 35789999999998754
No 56
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=55.08 E-value=4.6 Score=44.02 Aligned_cols=39 Identities=28% Similarity=0.317 Sum_probs=28.5
Q ss_pred ceEEEEEEEecC-----CeEEEEEeCC--CCcccCCCcEEEEEeCC
Q 005360 313 RARLLSARALPC-----GVVELNFSKS--PGLYYNPTSILFVNVPS 351 (700)
Q Consensus 313 ~~~vvs~~~l~~-----~~~~l~~~~~--~~~~~~pGq~v~L~~p~ 351 (700)
..++++.+.++. ++..++|... .+..|+||+|+-|....
T Consensus 32 ~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N 77 (435)
T 1f20_A 32 AARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGN 77 (435)
T ss_dssp EEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCC
T ss_pred EEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecC
Confidence 356777777753 4777888764 35789999999998754
No 57
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=44.98 E-value=8.8 Score=40.84 Aligned_cols=38 Identities=24% Similarity=0.285 Sum_probs=28.1
Q ss_pred eEEEEEEEecC-----CeEEEEEeCC-CCcccCCCcEEEEEeCC
Q 005360 314 ARLLSARALPC-----GVVELNFSKS-PGLYYNPTSILFVNVPS 351 (700)
Q Consensus 314 ~~vvs~~~l~~-----~~~~l~~~~~-~~~~~~pGq~v~L~~p~ 351 (700)
.++++.+.+++ ++..++|..+ .+..|+||+++-|..+.
T Consensus 14 a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N 57 (374)
T 1ddg_A 14 ASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQN 57 (374)
T ss_dssp EEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCC
T ss_pred EEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCC
Confidence 46666666653 4777888763 46789999999998764
No 58
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=36.08 E-value=26 Score=36.67 Aligned_cols=25 Identities=24% Similarity=0.618 Sum_probs=22.0
Q ss_pred CeEEEEEcCCC--hhhHHHHHHHHHHh
Q 005360 417 ESLVMVSGGSG--ISPFISIVRELIFQ 441 (700)
Q Consensus 417 ~~vvlIAGG~G--ITp~lsil~~l~~~ 441 (700)
+++++.||||| |.|.+++++++.++
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhC
Confidence 57899999997 89999999998765
No 59
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=33.19 E-value=16 Score=39.07 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=29.5
Q ss_pred eEEEEEEEecC-----CeEEEEEeCCCCcccCCCcEEEEEeCC
Q 005360 314 ARLLSARALPC-----GVVELNFSKSPGLYYNPTSILFVNVPS 351 (700)
Q Consensus 314 ~~vvs~~~l~~-----~~~~l~~~~~~~~~~~pGq~v~L~~p~ 351 (700)
.++++.+.++. ++..++|..+.+..|+||+|+-|....
T Consensus 9 a~v~~n~~Lt~~~~~~~~~hie~~l~~~~~Y~~GD~l~v~p~N 51 (393)
T 4dql_A 9 TNVVASKELQQPGSARSTRHLEIELPKEASYQEGDHLGVIPRN 51 (393)
T ss_dssp EEEEEEEECSCTTCSCCEEEEEEECCTTCCCCTTCEEEECCCC
T ss_pred EEEEeEEEcCCCCCCceEEEEEEECCCCCccCCCCEEEEEccC
Confidence 46677777653 588888887778899999999988654
No 60
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=30.87 E-value=19 Score=40.31 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=28.7
Q ss_pred eEEEEEEEecC-----CeEEEEEeCCC-CcccCCCcEEEEEeCC
Q 005360 314 ARLLSARALPC-----GVVELNFSKSP-GLYYNPTSILFVNVPS 351 (700)
Q Consensus 314 ~~vvs~~~l~~-----~~~~l~~~~~~-~~~~~pGq~v~L~~p~ 351 (700)
.++++.+.++. ++..++|..+. ...|+||+|+-|..+.
T Consensus 117 a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N 160 (539)
T 2qtl_A 117 VPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPN 160 (539)
T ss_dssp EEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCC
T ss_pred EEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCC
Confidence 46777777763 57888888654 4689999999998765
No 61
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=28.80 E-value=22 Score=40.95 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=27.3
Q ss_pred eEEEEEEEec----CCeEEEEEeCC-CCcccCCCcEEEEEeCC
Q 005360 314 ARLLSARALP----CGVVELNFSKS-PGLYYNPTSILFVNVPS 351 (700)
Q Consensus 314 ~~vvs~~~l~----~~~~~l~~~~~-~~~~~~pGq~v~L~~p~ 351 (700)
.++++.+.++ .++..++|..+ .+..|+||+|+-|....
T Consensus 262 a~v~~~~~L~~~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N 304 (682)
T 2bpo_A 262 APIVKSRELFSSNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSN 304 (682)
T ss_dssp EEEEEEEECCCCSSCCEEEEEEECTTBTCCCCTTCEEEECCCC
T ss_pred EEEEEEEEccCCCCCCEEEEEEEcCCCCceecCCCEEEEEcCC
Confidence 4666666664 25777888753 46889999999998654
No 62
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=27.23 E-value=22 Score=38.93 Aligned_cols=38 Identities=18% Similarity=0.229 Sum_probs=28.1
Q ss_pred eEEEEEEEecC----CeEEEEEeCC-CCcccCCCcEEEEEeCC
Q 005360 314 ARLLSARALPC----GVVELNFSKS-PGLYYNPTSILFVNVPS 351 (700)
Q Consensus 314 ~~vvs~~~l~~----~~~~l~~~~~-~~~~~~pGq~v~L~~p~ 351 (700)
.++++.+.++. ++..++|..+ .+..|+||+|+-|....
T Consensus 65 a~v~~n~~Lt~~~~r~~~hie~dl~~s~l~Y~~GD~l~V~p~N 107 (458)
T 3qfs_A 65 AAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPAN 107 (458)
T ss_dssp EEEEEEEECCSSSSSCEEEEEEECTTSCCCCCTTCEEEECCCC
T ss_pred EEEEEEEEcCCCCCCCEEEEEEEeCCCCcccCCCCEEEEEeeC
Confidence 45666666653 5788888864 46889999999998654
No 63
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=25.91 E-value=23 Score=40.23 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=27.3
Q ss_pred eEEEEEEEec----CCeEEEEEeCCC-CcccCCCcEEEEEeCC
Q 005360 314 ARLLSARALP----CGVVELNFSKSP-GLYYNPTSILFVNVPS 351 (700)
Q Consensus 314 ~~vvs~~~l~----~~~~~l~~~~~~-~~~~~pGq~v~L~~p~ 351 (700)
.++++.+.++ .++..++|..+. +..|+||+|+-|....
T Consensus 225 a~v~~n~~Lt~~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N 267 (618)
T 3qe2_A 225 AAVTTNRKLNQGTERHLMHLELDISDSKIRYESGDHVAVYPAN 267 (618)
T ss_dssp EEEEEEEECSCCSSSCEEEEEEECTTSCCCCCTTCEEEECCCC
T ss_pred EEEEeEEEcCCCCCCcEEEEEEEcCCCCcccccCCEEEEEcCC
Confidence 4566666664 357788887643 5889999999987654
Done!