Query 005365
Match_columns 700
No_of_seqs 409 out of 3054
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 22:18:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005365.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005365hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 4E-174 9E-179 1491.5 62.2 699 1-699 2-753 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 1E-166 2E-171 1431.1 66.1 676 24-699 1-730 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 1E-168 2E-173 1344.3 32.2 547 7-553 1-549 (550)
4 TIGR02468 sucrsPsyn_pln sucros 100.0 1.7E-50 3.8E-55 474.7 39.7 396 276-698 169-653 (1050)
5 KOG0853 Glycosyltransferase [C 100.0 9.9E-51 2.2E-55 442.7 23.9 440 193-699 1-450 (495)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 1.1E-44 2.3E-49 405.8 37.5 387 277-699 1-423 (439)
7 TIGR03449 mycothiol_MshA UDP-N 100.0 4.1E-37 8.8E-42 339.9 35.3 371 279-698 1-384 (405)
8 cd03800 GT1_Sucrose_synthase T 100.0 1E-35 2.2E-40 325.6 37.1 372 278-699 1-385 (398)
9 PRK00654 glgA glycogen synthas 100.0 7.6E-36 1.6E-40 336.7 34.8 376 277-695 1-444 (466)
10 TIGR02095 glgA glycogen/starch 100.0 1.8E-34 4E-39 326.1 36.2 382 277-695 1-454 (473)
11 cd03796 GT1_PIG-A_like This fa 100.0 3.3E-34 7.2E-39 316.8 34.7 346 278-699 1-350 (398)
12 PRK10307 putative glycosyl tra 100.0 7.1E-34 1.5E-38 315.4 34.0 365 277-699 1-390 (412)
13 PLN02939 transferase, transfer 100.0 5.3E-33 1.1E-37 322.9 41.8 408 255-695 456-948 (977)
14 PRK15427 colanic acid biosynth 100.0 1.7E-33 3.7E-38 312.1 35.3 259 404-699 117-388 (406)
15 cd03791 GT1_Glycogen_synthase_ 100.0 5.2E-33 1.1E-37 314.2 35.1 383 278-695 1-458 (476)
16 PLN02316 synthase/transferase 100.0 7.5E-33 1.6E-37 327.1 37.6 358 276-697 587-1014(1036)
17 PLN02871 UDP-sulfoquinovose:DA 100.0 5E-33 1.1E-37 313.8 33.7 347 274-699 56-417 (465)
18 cd04962 GT1_like_5 This family 100.0 1.1E-32 2.5E-37 299.2 34.4 340 277-699 1-353 (371)
19 TIGR02149 glgA_Coryne glycogen 100.0 1.2E-32 2.7E-37 301.6 33.7 350 277-699 1-369 (388)
20 PRK14098 glycogen synthase; Pr 100.0 2.2E-32 4.7E-37 309.4 35.6 385 274-694 4-466 (489)
21 cd03805 GT1_ALG2_like This fam 100.0 2.9E-32 6.2E-37 299.1 33.9 361 277-699 1-381 (392)
22 cd03818 GT1_ExpC_like This fam 100.0 1E-31 2.3E-36 296.6 34.4 332 316-699 15-383 (396)
23 PRK14099 glycogen synthase; Pr 100.0 2.1E-31 4.6E-36 301.1 36.5 387 276-695 3-460 (485)
24 cd05844 GT1_like_7 Glycosyltra 100.0 1.8E-31 4E-36 289.3 33.0 264 405-699 82-353 (367)
25 cd03819 GT1_WavL_like This fam 100.0 3E-31 6.5E-36 285.7 32.4 327 298-700 8-349 (355)
26 PRK15484 lipopolysaccharide 1, 100.0 3.1E-31 6.8E-36 291.6 32.7 342 275-699 1-360 (380)
27 TIGR03088 stp2 sugar transfera 100.0 3.7E-31 8E-36 289.1 31.6 335 278-699 3-355 (374)
28 cd04955 GT1_like_6 This family 100.0 1.5E-30 3.3E-35 280.8 33.9 339 278-699 1-347 (363)
29 cd03795 GT1_like_4 This family 100.0 3.3E-30 7.3E-35 277.2 34.2 339 278-700 1-350 (357)
30 PRK15490 Vi polysaccharide bio 100.0 7.8E-30 1.7E-34 284.1 35.3 361 297-700 171-559 (578)
31 cd03799 GT1_amsK_like This is 100.0 9.8E-30 2.1E-34 273.3 34.0 256 404-699 78-344 (355)
32 cd03821 GT1_Bme6_like This fam 100.0 1.2E-29 2.5E-34 271.4 33.8 351 278-699 1-362 (375)
33 cd03812 GT1_CapH_like This fam 100.0 3E-30 6.6E-35 278.3 29.2 335 278-697 1-346 (358)
34 cd03816 GT1_ALG1_like This fam 100.0 5.2E-30 1.1E-34 285.1 31.9 353 274-699 1-401 (415)
35 PRK09922 UDP-D-galactose:(gluc 100.0 2.6E-30 5.7E-35 281.8 27.0 331 277-699 1-343 (359)
36 PRK15179 Vi polysaccharide bio 100.0 1.1E-29 2.5E-34 294.5 33.2 428 201-699 204-676 (694)
37 cd03802 GT1_AviGT4_like This f 100.0 1.8E-29 3.8E-34 269.8 31.7 304 277-676 1-306 (335)
38 cd03817 GT1_UGDG_like This fam 100.0 2.8E-29 6.1E-34 268.8 33.3 347 278-699 1-360 (374)
39 cd03794 GT1_wbuB_like This fam 100.0 4.9E-29 1.1E-33 267.6 33.2 366 278-699 1-382 (394)
40 cd03801 GT1_YqgM_like This fam 100.0 1.4E-28 3E-33 260.8 35.0 350 278-699 1-358 (374)
41 cd03822 GT1_ecORF704_like This 100.0 1.4E-28 2.9E-33 264.3 34.6 337 278-699 1-351 (366)
42 cd03792 GT1_Trehalose_phosphor 100.0 2.2E-29 4.9E-34 275.5 27.5 257 404-699 84-354 (372)
43 cd03808 GT1_cap1E_like This fa 100.0 3.6E-28 7.8E-33 257.9 33.8 343 278-699 1-346 (359)
44 KOG1111 N-acetylglucosaminyltr 100.0 1.2E-29 2.6E-34 261.8 21.5 336 277-684 1-341 (426)
45 cd03820 GT1_amsD_like This fam 100.0 2.3E-28 5E-33 258.3 31.4 333 278-698 1-335 (348)
46 cd03823 GT1_ExpE7_like This fa 100.0 3.2E-28 6.9E-33 259.9 32.3 338 278-698 1-345 (359)
47 cd03809 GT1_mtfB_like This fam 100.0 1.9E-28 4.1E-33 263.1 29.4 345 278-699 1-353 (365)
48 cd03814 GT1_like_2 This family 100.0 3.9E-28 8.5E-33 260.1 31.7 336 278-698 1-348 (364)
49 cd03806 GT1_ALG11_like This fa 100.0 4E-28 8.6E-33 270.3 32.4 210 465-695 182-406 (419)
50 cd03811 GT1_WabH_like This fam 100.0 5.1E-28 1.1E-32 255.7 31.7 342 278-700 1-350 (353)
51 cd03813 GT1_like_3 This family 100.0 3.6E-29 7.9E-34 283.1 23.5 271 404-699 172-459 (475)
52 PLN02949 transferase, transfer 100.0 5.6E-27 1.2E-31 263.1 35.5 216 466-699 214-440 (463)
53 PLN02846 digalactosyldiacylgly 100.0 1.6E-27 3.6E-32 264.5 28.2 333 275-676 3-361 (462)
54 cd03825 GT1_wcfI_like This fam 100.0 2.1E-27 4.5E-32 256.3 28.4 318 277-699 1-347 (365)
55 cd04951 GT1_WbdM_like This fam 100.0 8E-27 1.7E-31 251.2 32.9 330 278-698 1-342 (360)
56 cd03807 GT1_WbnK_like This fam 100.0 4.9E-27 1.1E-31 250.2 30.1 336 278-699 1-349 (365)
57 cd03798 GT1_wlbH_like This fam 100.0 1.2E-26 2.5E-31 247.2 32.7 257 404-699 92-359 (377)
58 cd04946 GT1_AmsK_like This fam 100.0 5.2E-27 1.1E-31 260.5 28.6 267 403-700 125-395 (407)
59 PLN02275 transferase, transfer 100.0 7.9E-27 1.7E-31 255.9 29.6 314 316-675 23-370 (371)
60 cd03804 GT1_wbaZ_like This fam 100.0 1.7E-27 3.7E-32 257.9 23.6 255 404-698 82-343 (351)
61 PRK10125 putative glycosyl tra 100.0 4.8E-27 1.1E-31 260.2 27.3 236 404-672 93-365 (405)
62 TIGR02918 accessory Sec system 99.9 1.7E-26 3.6E-31 261.6 26.2 262 404-699 210-483 (500)
63 TIGR03087 stp1 sugar transfera 99.9 2.4E-26 5.3E-31 254.0 24.9 260 404-699 103-379 (397)
64 cd04949 GT1_gtfA_like This fam 99.9 4.7E-25 1E-29 240.6 28.1 259 404-698 98-361 (372)
65 PLN02501 digalactosyldiacylgly 99.9 5.1E-24 1.1E-28 239.7 23.9 244 393-686 425-685 (794)
66 PRK00726 murG undecaprenyldiph 99.9 3E-22 6.4E-27 218.0 29.9 322 277-698 2-340 (357)
67 TIGR01133 murG undecaprenyldip 99.9 6.5E-22 1.4E-26 213.9 28.9 301 316-699 19-338 (348)
68 COG0297 GlgA Glycogen synthase 99.9 1.7E-21 3.6E-26 216.8 30.7 384 277-695 1-459 (487)
69 cd03785 GT1_MurG MurG is an N- 99.9 1.6E-21 3.5E-26 211.0 29.8 312 298-698 8-340 (350)
70 cd03793 GT1_Glycogen_synthase_ 99.9 7.5E-22 1.6E-26 220.5 24.8 275 403-694 146-563 (590)
71 PHA01630 putative group 1 glyc 99.9 5.1E-22 1.1E-26 214.2 22.6 234 411-697 52-312 (331)
72 PHA01633 putative glycosyl tra 99.9 2.5E-20 5.4E-25 199.8 29.3 221 428-698 70-322 (335)
73 PRK05749 3-deoxy-D-manno-octul 99.9 1.3E-20 2.8E-25 210.3 25.4 261 405-700 124-406 (425)
74 PF00534 Glycos_transf_1: Glyc 99.9 3.3E-21 7.2E-26 187.3 13.8 159 524-696 13-172 (172)
75 cd03788 GT1_TPS Trehalose-6-Ph 99.9 2.5E-20 5.4E-25 209.9 22.9 271 405-699 131-445 (460)
76 TIGR02400 trehalose_OtsA alpha 99.9 1.5E-19 3.1E-24 202.7 28.1 281 394-699 117-440 (456)
77 cd01635 Glycosyltransferase_GT 99.9 7.1E-20 1.5E-24 183.0 23.1 121 531-660 109-229 (229)
78 PLN03063 alpha,alpha-trehalose 99.8 1.1E-17 2.4E-22 198.7 25.3 276 405-700 147-462 (797)
79 PRK13609 diacylglycerol glucos 99.8 4.4E-18 9.6E-23 187.0 20.1 241 393-697 95-353 (380)
80 PLN02605 monogalactosyldiacylg 99.7 3.6E-16 7.8E-21 172.3 23.7 238 405-698 100-364 (382)
81 cd04950 GT1_like_1 Glycosyltra 99.7 2E-15 4.4E-20 165.8 27.6 223 403-676 100-338 (373)
82 PRK09814 beta-1,6-galactofuran 99.7 1.1E-15 2.3E-20 165.5 24.6 235 405-698 63-314 (333)
83 PRK14501 putative bifunctional 99.7 7.6E-16 1.6E-20 182.8 21.8 279 394-699 123-446 (726)
84 PRK13608 diacylglycerol glucos 99.7 4.2E-15 9.1E-20 164.4 24.6 242 393-698 95-354 (391)
85 TIGR00236 wecB UDP-N-acetylglu 99.7 6E-15 1.3E-19 161.4 25.4 256 391-693 75-345 (365)
86 COG0438 RfaG Glycosyltransfera 99.7 6.4E-15 1.4E-19 153.9 23.2 268 406-698 84-358 (381)
87 PRK00025 lpxB lipid-A-disaccha 99.7 8.9E-15 1.9E-19 160.6 23.9 241 394-694 77-353 (380)
88 KOG1387 Glycosyltransferase [C 99.6 1.8E-13 4E-18 141.4 26.1 272 403-698 148-441 (465)
89 cd03786 GT1_UDP-GlcNAc_2-Epime 99.6 1.3E-13 2.8E-18 150.1 24.6 248 392-689 78-344 (363)
90 TIGR03713 acc_sec_asp1 accesso 99.6 2.3E-13 4.9E-18 154.8 26.2 204 469-699 269-505 (519)
91 TIGR02398 gluc_glyc_Psyn gluco 99.6 6.6E-13 1.4E-17 148.9 26.9 270 405-699 132-466 (487)
92 TIGR02094 more_P_ylases alpha- 99.5 2.7E-12 5.9E-17 147.9 26.5 299 391-696 148-580 (601)
93 KOG2941 Beta-1,4-mannosyltrans 99.5 6.6E-12 1.4E-16 130.2 23.0 350 318-698 33-425 (444)
94 PLN03064 alpha,alpha-trehalose 99.4 1.7E-11 3.7E-16 145.8 26.5 272 405-699 231-545 (934)
95 PF13692 Glyco_trans_1_4: Glyc 99.4 3.9E-13 8.4E-18 125.2 8.2 127 529-676 5-133 (135)
96 TIGR00215 lpxB lipid-A-disacch 99.4 2.2E-10 4.8E-15 126.6 26.1 246 392-693 79-362 (385)
97 cd04299 GT1_Glycogen_Phosphory 99.3 3E-10 6.6E-15 133.4 25.4 295 394-696 238-669 (778)
98 PF05693 Glycogen_syn: Glycoge 99.3 5.8E-10 1.3E-14 125.0 24.4 274 407-697 145-563 (633)
99 PF13579 Glyco_trans_4_4: Glyc 99.3 2.5E-11 5.5E-16 114.7 11.3 146 300-489 1-146 (160)
100 PF13439 Glyco_transf_4: Glyco 99.2 1.1E-10 2.4E-15 112.2 13.2 166 297-531 9-176 (177)
101 TIGR02919 accessory Sec system 99.2 3.7E-09 8E-14 118.0 24.4 187 471-696 238-425 (438)
102 PF13524 Glyco_trans_1_2: Glyc 99.1 2.2E-10 4.7E-15 100.1 9.3 80 615-700 1-80 (92)
103 PF09314 DUF1972: Domain of un 99.1 3.2E-09 6.9E-14 104.4 16.2 165 276-492 1-173 (185)
104 COG0707 MurG UDP-N-acetylgluco 99.0 4.9E-07 1.1E-11 98.5 31.1 308 299-697 10-339 (357)
105 PF00982 Glyco_transf_20: Glyc 98.9 1.5E-07 3.2E-12 106.2 23.3 270 405-699 141-458 (474)
106 PF08323 Glyco_transf_5: Starc 98.9 4.3E-09 9.2E-14 109.1 10.0 185 278-489 1-232 (245)
107 PRK12446 undecaprenyldiphospho 98.8 1.4E-06 3.1E-11 95.2 26.9 77 603-688 244-331 (352)
108 cd03784 GT1_Gtf_like This fami 98.8 2.8E-07 6E-12 102.1 19.8 93 585-694 285-383 (401)
109 PF13477 Glyco_trans_4_2: Glyc 98.8 2E-07 4.3E-12 87.3 14.5 123 316-480 15-139 (139)
110 PRK10117 trehalose-6-phosphate 98.7 1E-06 2.2E-11 98.6 22.2 271 405-699 123-437 (474)
111 TIGR03492 conserved hypothetic 98.7 4.6E-06 9.9E-11 92.7 25.2 254 403-695 91-377 (396)
112 COG0380 OtsA Trehalose-6-phosp 98.5 1.6E-05 3.4E-10 88.9 24.2 270 405-698 147-462 (486)
113 PLN02205 alpha,alpha-trehalose 98.5 1.3E-05 2.9E-10 96.4 24.4 269 407-699 203-535 (854)
114 TIGR01426 MGT glycosyltransfer 98.5 3.7E-05 8E-10 85.1 25.3 91 586-692 273-369 (392)
115 COG1519 KdtA 3-deoxy-D-manno-o 98.4 0.0001 2.3E-09 80.2 25.5 249 405-700 123-404 (419)
116 PF13528 Glyco_trans_1_3: Glyc 98.3 3.5E-05 7.5E-10 82.5 20.0 113 528-674 195-316 (318)
117 TIGR03568 NeuC_NnaA UDP-N-acet 98.3 0.00023 5E-09 78.3 25.8 85 587-689 261-345 (365)
118 TIGR00661 MJ1255 conserved hyp 98.3 5E-05 1.1E-09 81.9 20.1 79 586-675 227-311 (321)
119 PHA03392 egt ecdysteroid UDP-g 98.0 0.0022 4.7E-08 73.7 26.0 96 586-695 344-445 (507)
120 PF02350 Epimerase_2: UDP-N-ac 97.9 0.00032 7E-09 76.6 16.9 252 390-690 55-326 (346)
121 PLN02448 UDP-glycosyltransfera 97.9 0.0064 1.4E-07 69.0 27.9 93 588-696 323-430 (459)
122 TIGR03590 PseG pseudaminic aci 97.8 0.0022 4.7E-08 67.9 19.7 94 529-644 174-268 (279)
123 PF02684 LpxB: Lipid-A-disacch 97.6 0.0036 7.8E-08 68.8 19.5 245 392-692 72-350 (373)
124 COG1819 Glycosyl transferases, 97.5 0.003 6.6E-08 70.4 16.9 94 585-694 281-380 (406)
125 PF13844 Glyco_transf_41: Glyc 97.4 0.0018 4E-08 72.6 13.2 154 529-698 286-446 (468)
126 KOG3742 Glycogen synthase [Car 97.4 0.00022 4.8E-09 77.0 5.2 83 601-692 493-587 (692)
127 PLN02410 UDP-glucoronosyl/UDP- 97.3 0.15 3.2E-06 57.9 28.1 95 587-696 323-423 (451)
128 PLN03007 UDP-glucosyltransfera 97.3 0.17 3.8E-06 57.8 29.0 77 588-676 345-438 (482)
129 PF04007 DUF354: Protein of un 97.3 0.026 5.7E-07 61.2 20.6 63 606-676 243-308 (335)
130 PLN02208 glycosyltransferase f 97.3 0.086 1.9E-06 59.6 25.4 66 627-696 340-416 (442)
131 PLN02562 UDP-glycosyltransfera 97.1 0.2 4.3E-06 56.8 25.5 87 588-690 328-421 (448)
132 PLN02554 UDP-glycosyltransfera 97.0 0.37 8E-06 55.1 27.0 59 627-688 371-447 (481)
133 PRK10017 colanic acid biosynth 96.9 0.49 1.1E-05 53.2 26.4 93 578-685 297-395 (426)
134 PLN02173 UDP-glucosyl transfer 96.9 1 2.3E-05 50.9 28.8 93 587-696 316-421 (449)
135 COG0763 LpxB Lipid A disacchar 96.8 0.048 1E-06 59.2 16.5 239 403-691 83-353 (381)
136 PLN00414 glycosyltransferase f 96.7 1.6 3.4E-05 49.5 29.3 86 599-696 319-417 (446)
137 PLN02670 transferase, transfer 96.5 1.2 2.6E-05 50.8 26.5 50 627-676 368-427 (472)
138 COG3914 Spy Predicted O-linked 96.5 0.097 2.1E-06 59.3 16.9 149 528-692 430-587 (620)
139 PF08288 PIGA: PIGA (GPI ancho 96.5 0.015 3.3E-07 49.8 8.1 72 357-439 13-86 (90)
140 COG0381 WecB UDP-N-acetylgluco 96.5 1.2 2.6E-05 48.8 24.6 133 538-692 218-351 (383)
141 PLN02210 UDP-glucosyl transfer 96.5 2.3 4.9E-05 48.4 29.6 70 599-676 331-413 (456)
142 PRK01021 lpxB lipid-A-disaccha 96.4 0.21 4.5E-06 57.9 19.5 78 606-694 483-583 (608)
143 PF12000 Glyco_trans_4_3: Gkyc 96.4 0.038 8.3E-07 54.0 11.7 110 395-531 57-170 (171)
144 PLN02992 coniferyl-alcohol glu 96.1 2.5 5.5E-05 48.3 25.9 76 589-676 339-425 (481)
145 COG3980 spsG Spore coat polysa 95.7 0.22 4.8E-06 51.9 13.5 122 545-694 175-305 (318)
146 PF07429 Glyco_transf_56: 4-al 95.6 1.5 3.3E-05 47.3 20.1 140 529-676 187-331 (360)
147 PRK14986 glycogen phosphorylas 95.0 0.24 5.2E-06 59.1 12.9 141 524-670 541-702 (815)
148 PRK02797 4-alpha-L-fucosyltran 95.0 2.9 6.3E-05 44.6 19.5 135 529-671 148-287 (322)
149 COG2327 WcaK Polysaccharide py 94.9 7.4 0.00016 42.9 26.5 87 587-688 265-357 (385)
150 PRK14089 ipid-A-disaccharide s 94.3 1.4 3E-05 48.2 16.0 77 540-642 184-260 (347)
151 TIGR02093 P_ylase glycogen/sta 94.3 0.15 3.3E-06 60.5 8.9 142 523-670 524-686 (794)
152 COG0058 GlgP Glucan phosphoryl 94.1 0.54 1.2E-05 55.6 12.9 135 524-663 485-631 (750)
153 COG4671 Predicted glycosyl tra 93.8 12 0.00026 40.7 23.5 92 572-677 264-364 (400)
154 PRK14985 maltodextrin phosphor 93.7 0.39 8.4E-06 57.2 10.7 141 523-669 526-687 (798)
155 cd04300 GT1_Glycogen_Phosphory 93.3 0.4 8.6E-06 57.3 10.1 141 523-669 527-688 (797)
156 PLN03015 UDP-glucosyl transfer 93.3 18 0.0004 41.2 26.5 50 627-676 364-424 (470)
157 PF04101 Glyco_tran_28_C: Glyc 93.3 0.039 8.4E-07 53.4 1.4 91 588-693 55-155 (167)
158 COG4641 Uncharacterized protei 93.2 0.13 2.7E-06 55.8 5.4 102 588-699 237-344 (373)
159 COG1817 Uncharacterized protei 93.2 4.2 9.1E-05 43.3 16.1 57 613-676 253-312 (346)
160 cd03789 GT1_LPS_heptosyltransf 92.6 15 0.00033 38.4 21.1 84 542-642 140-223 (279)
161 PRK10422 lipopolysaccharide co 92.4 19 0.00041 39.2 24.9 84 543-641 203-286 (352)
162 TIGR02201 heptsyl_trn_III lipo 91.1 25 0.00055 38.0 24.0 84 543-641 201-284 (344)
163 PF00343 Phosphorylase: Carboh 90.8 3.5 7.6E-05 48.8 13.7 140 524-669 442-602 (713)
164 PF06258 Mito_fiss_Elm1: Mitoc 90.6 14 0.00031 39.7 17.4 92 542-646 168-259 (311)
165 PF11440 AGT: DNA alpha-glucos 89.7 30 0.00064 36.5 18.8 142 527-676 184-351 (355)
166 PLN03004 UDP-glycosyltransfera 89.4 1.8 3.8E-05 49.2 9.7 85 588-688 334-430 (451)
167 PRK10916 ADP-heptose:LPS hepto 88.9 38 0.00083 36.7 22.5 42 590-641 244-285 (348)
168 PF01975 SurE: Survival protei 88.4 4.5 9.7E-05 40.6 10.8 37 277-339 1-37 (196)
169 PF11997 DUF3492: Domain of un 87.8 0.89 1.9E-05 47.9 5.6 79 405-483 172-256 (268)
170 KOG1050 Trehalose-6-phosphate 87.2 17 0.00037 43.6 16.3 137 535-677 285-439 (732)
171 PF05159 Capsule_synth: Capsul 86.4 24 0.00051 36.9 15.5 86 540-642 138-224 (269)
172 PF10933 DUF2827: Protein of u 86.1 6.7 0.00014 42.7 11.0 153 528-698 192-346 (364)
173 PF04464 Glyphos_transf: CDP-G 86.1 9.7 0.00021 41.7 12.9 225 406-676 79-334 (369)
174 COG3660 Predicted nucleoside-d 84.5 56 0.0012 34.3 16.1 91 543-646 184-275 (329)
175 TIGR02195 heptsyl_trn_II lipop 84.4 63 0.0014 34.7 21.2 81 543-641 195-275 (334)
176 PRK13932 stationary phase surv 82.6 26 0.00056 36.7 13.3 35 402-436 88-133 (257)
177 PLN00164 glucosyltransferase; 82.5 2.5 5.5E-05 48.4 6.4 66 627-696 368-446 (480)
178 PLN02555 limonoid glucosyltran 80.1 7.7 0.00017 44.4 9.2 95 587-696 336-442 (480)
179 TIGR00087 surE 5'/3'-nucleotid 79.5 37 0.00081 35.2 13.2 36 402-437 83-129 (244)
180 PF00201 UDPGT: UDP-glucoronos 79.4 2.2 4.7E-05 48.8 4.6 62 626-691 351-418 (500)
181 COG1618 Predicted nucleotide k 78.7 54 0.0012 32.0 12.8 36 273-329 2-37 (179)
182 PLN02863 UDP-glucoronosyl/UDP- 76.4 28 0.0006 39.9 12.3 78 589-676 344-431 (477)
183 PF08660 Alg14: Oligosaccharid 76.3 18 0.0004 35.3 9.4 78 384-484 75-158 (170)
184 COG1797 CobB Cobyrinic acid a, 76.3 92 0.002 35.0 15.6 77 560-646 246-333 (451)
185 PLN02764 glycosyltransferase f 75.3 6.3 0.00014 44.8 6.7 87 599-695 324-421 (453)
186 PLN02167 UDP-glycosyltransfera 73.3 7.2 0.00016 44.6 6.6 50 627-676 369-432 (475)
187 PRK13933 stationary phase surv 72.2 62 0.0013 33.8 12.6 35 402-436 84-129 (253)
188 PF04413 Glycos_transf_N: 3-De 70.9 28 0.0006 34.6 9.3 69 405-486 95-163 (186)
189 PRK13935 stationary phase surv 69.8 82 0.0018 32.9 12.8 35 402-436 83-128 (253)
190 PLN02152 indole-3-acetate beta 69.7 14 0.0003 42.1 7.8 78 587-676 326-415 (455)
191 COG1703 ArgK Putative periplas 69.1 71 0.0015 34.2 12.1 103 316-438 70-176 (323)
192 PF03016 Exostosin: Exostosin 69.0 12 0.00026 39.4 6.8 71 602-673 227-300 (302)
193 TIGR03609 S_layer_CsaB polysac 68.7 1.6E+02 0.0035 31.0 16.6 87 540-642 189-275 (298)
194 COG2910 Putative NADH-flavin r 67.7 5.5 0.00012 39.4 3.4 34 277-339 1-34 (211)
195 PRK02122 glucosamine-6-phospha 65.8 16 0.00034 43.5 7.4 106 206-338 291-408 (652)
196 PF12038 DUF3524: Domain of un 64.0 46 0.001 32.4 8.9 81 405-494 59-141 (168)
197 PF10087 DUF2325: Uncharacteri 63.1 22 0.00047 31.2 6.1 74 574-651 12-90 (97)
198 TIGR00715 precor6x_red precorr 62.2 38 0.00081 35.5 8.7 55 613-675 198-254 (256)
199 PF06925 MGDG_synth: Monogalac 61.9 72 0.0016 30.7 10.2 68 393-486 80-151 (169)
200 COG0496 SurE Predicted acid ph 61.3 1.1E+02 0.0025 31.8 11.8 34 405-438 83-127 (252)
201 PLN02534 UDP-glycosyltransfera 58.7 47 0.001 38.2 9.4 77 588-676 344-442 (491)
202 TIGR02193 heptsyl_trn_I lipopo 58.2 1.8E+02 0.0039 30.9 13.4 81 543-642 199-279 (319)
203 PLN02207 UDP-glycosyltransfera 57.9 24 0.00052 40.3 6.9 50 627-676 361-424 (468)
204 PRK13934 stationary phase surv 57.6 1.5E+02 0.0033 31.2 12.1 34 403-436 82-127 (266)
205 PRK03359 putative electron tra 56.9 40 0.00087 35.3 7.8 34 405-438 112-149 (256)
206 PRK12342 hypothetical protein; 55.7 36 0.00078 35.6 7.2 42 394-438 101-146 (254)
207 PF04392 ABC_sub_bind: ABC tra 55.5 1.6E+02 0.0034 31.1 12.3 92 563-661 138-233 (294)
208 PRK00346 surE 5'(3')-nucleotid 53.5 2.3E+02 0.0049 29.6 12.6 35 402-436 79-124 (250)
209 PRK06988 putative formyltransf 53.0 67 0.0015 34.6 9.0 18 317-337 17-34 (312)
210 PF01075 Glyco_transf_9: Glyco 52.5 1E+02 0.0022 31.2 10.1 90 537-642 117-208 (247)
211 COG1647 Esterase/lipase [Gener 52.2 1.4E+02 0.0031 30.6 10.3 44 391-436 72-115 (243)
212 PF04230 PS_pyruv_trans: Polys 50.2 2.8E+02 0.006 27.8 14.3 47 588-643 237-283 (286)
213 PF03033 Glyco_transf_28: Glyc 49.4 17 0.00036 33.4 3.3 28 299-338 8-35 (139)
214 COG0859 RfaF ADP-heptose:LPS h 47.2 1.1E+02 0.0024 33.1 9.7 87 537-642 188-276 (334)
215 PLN02863 UDP-glucoronosyl/UDP- 42.9 2.2E+02 0.0048 32.6 11.6 39 276-339 9-47 (477)
216 PF09752 DUF2048: Uncharacteri 42.6 2E+02 0.0043 31.5 10.5 42 393-436 164-205 (348)
217 PLN02764 glycosyltransferase f 42.6 2.7E+02 0.0058 31.7 12.1 26 405-433 108-133 (453)
218 PF11071 DUF2872: Protein of u 42.3 1.5E+02 0.0033 27.7 8.0 64 607-676 68-140 (141)
219 KOG2452 Formyltetrahydrofolate 41.5 30 0.00065 38.5 4.0 38 277-345 1-38 (881)
220 PLN00016 RNA-binding protein; 40.2 29 0.00063 38.1 3.9 20 316-339 71-90 (378)
221 PRK08057 cobalt-precorrin-6x r 39.1 3E+02 0.0065 28.6 10.9 40 394-436 57-100 (248)
222 PF08672 APC2: Anaphase promot 38.4 19 0.0004 29.0 1.4 36 5-40 13-51 (60)
223 KOG1021 Acetylglucosaminyltran 38.3 3.2E+02 0.0068 31.2 11.9 87 603-695 335-424 (464)
224 PRK10964 ADP-heptose:LPS hepto 38.1 1.7E+02 0.0038 31.1 9.4 43 589-641 235-277 (322)
225 PRK08229 2-dehydropantoate 2-r 37.2 30 0.00064 37.4 3.3 19 316-338 16-34 (341)
226 PF00731 AIRC: AIR carboxylase 36.6 3E+02 0.0064 26.5 9.5 121 568-697 10-147 (150)
227 COG3171 Uncharacterized protei 35.8 33 0.00073 30.9 2.7 33 230-262 25-61 (119)
228 PF13407 Peripla_BP_4: Peripla 34.8 2.8E+02 0.0061 27.9 10.0 38 608-645 51-89 (257)
229 PF10649 DUF2478: Protein of u 34.6 4.4E+02 0.0095 25.6 13.6 106 316-437 18-132 (159)
230 PLN02657 3,8-divinyl protochlo 34.4 45 0.00098 37.0 4.3 52 259-339 43-94 (390)
231 COG0569 TrkA K+ transport syst 34.4 1.6E+02 0.0035 30.0 7.9 33 405-437 66-102 (225)
232 COG4195 Phage-related replicat 32.6 52 0.0011 32.5 3.7 58 244-318 8-65 (208)
233 PLN02534 UDP-glycosyltransfera 31.7 5.3E+02 0.012 29.7 12.4 37 277-338 9-45 (491)
234 PF03358 FMN_red: NADPH-depend 31.0 72 0.0016 29.8 4.5 38 277-336 1-38 (152)
235 CHL00194 ycf39 Ycf39; Provisio 30.5 46 0.00099 35.5 3.4 19 316-338 15-33 (317)
236 COG1832 Predicted CoA-binding 30.4 3.5E+02 0.0075 25.7 8.5 106 277-432 17-124 (140)
237 PF15024 Glyco_transf_18: Glyc 30.2 1.3E+02 0.0029 34.9 7.0 85 586-678 320-430 (559)
238 COG1010 CobJ Precorrin-3B meth 29.9 2.1E+02 0.0046 29.6 7.6 21 316-340 63-83 (249)
239 KOG4626 O-linked N-acetylgluco 29.7 3E+02 0.0065 32.5 9.5 142 538-694 769-916 (966)
240 KOG2884 26S proteasome regulat 29.6 5.1E+02 0.011 26.5 10.0 58 613-676 168-227 (259)
241 TIGR00639 PurN phosphoribosylg 29.4 5.7E+02 0.012 25.3 11.2 45 393-442 70-114 (190)
242 PF05728 UPF0227: Uncharacteri 29.1 5.3E+02 0.011 25.5 10.4 30 408-438 62-91 (187)
243 PLN02152 indole-3-acetate beta 28.9 5.3E+02 0.012 29.4 11.7 112 300-433 14-132 (455)
244 PRK05647 purN phosphoribosylgl 28.2 3.2E+02 0.007 27.3 8.8 18 393-413 71-88 (200)
245 PF10649 DUF2478: Protein of u 27.9 1.1E+02 0.0024 29.7 5.1 37 606-642 87-129 (159)
246 PRK13940 glutamyl-tRNA reducta 27.8 9.1E+02 0.02 27.1 13.4 47 602-651 233-279 (414)
247 COG0373 HemA Glutamyl-tRNA red 27.7 7.8E+02 0.017 27.7 12.3 89 599-698 226-320 (414)
248 COG4088 Predicted nucleotide k 27.7 3E+02 0.0066 28.2 8.1 49 386-436 56-108 (261)
249 TIGR00557 pdxA 4-hydroxythreon 27.4 2.7E+02 0.0058 30.3 8.4 32 404-435 251-289 (320)
250 PRK09739 hypothetical protein; 27.4 92 0.002 30.9 4.7 36 276-329 3-38 (199)
251 TIGR02990 ectoine_eutA ectoine 27.0 3.2E+02 0.0068 28.3 8.7 34 404-437 180-215 (239)
252 PF03308 ArgK: ArgK protein; 26.7 6.1E+02 0.013 26.7 10.6 108 301-436 41-152 (266)
253 PRK00676 hemA glutamyl-tRNA re 26.4 8.8E+02 0.019 26.5 12.5 125 556-697 173-305 (338)
254 PLN03004 UDP-glycosyltransfera 26.4 7.1E+02 0.015 28.3 12.1 19 468-486 204-222 (451)
255 PRK10427 putative PTS system f 26.3 1.2E+02 0.0026 27.6 4.8 43 275-339 1-43 (114)
256 TIGR02853 spore_dpaA dipicolin 26.2 4.7E+02 0.01 27.8 10.0 17 316-336 15-31 (287)
257 COG2085 Predicted dinucleotide 25.7 71 0.0015 32.4 3.5 22 316-341 15-36 (211)
258 TIGR03646 YtoQ_fam YtoQ family 25.5 4.1E+02 0.0088 25.0 7.9 64 572-643 12-110 (144)
259 PRK03371 pdxA 4-hydroxythreoni 25.5 3.1E+02 0.0067 29.8 8.5 32 404-435 257-295 (326)
260 PRK00232 pdxA 4-hydroxythreoni 25.3 3.3E+02 0.0071 29.7 8.7 32 404-435 258-296 (332)
261 PLN02778 3,5-epimerase/4-reduc 24.5 76 0.0017 33.6 3.7 31 274-329 7-37 (298)
262 PRK07206 hypothetical protein; 24.4 2.4E+02 0.0051 31.3 7.8 27 405-431 70-96 (416)
263 PF06377 Adipokin_hormo: Adipo 24.0 26 0.00056 26.8 -0.0 14 234-247 2-15 (48)
264 PRK05866 short chain dehydroge 24.0 1.4E+02 0.0031 31.4 5.7 19 316-338 55-73 (293)
265 TIGR01319 glmL_fam conserved h 23.7 2.8E+02 0.006 31.6 7.9 61 551-616 116-176 (463)
266 PRK06249 2-dehydropantoate 2-r 23.2 77 0.0017 33.9 3.5 19 316-338 19-37 (313)
267 cd01020 TroA_b Metal binding p 23.2 2.9E+02 0.0063 28.7 7.7 89 605-698 46-135 (264)
268 PF05908 DUF867: Protein of un 23.1 61 0.0013 32.5 2.4 31 278-329 28-59 (194)
269 PF02571 CbiJ: Precorrin-6x re 22.9 5.5E+02 0.012 26.7 9.6 35 613-647 195-230 (249)
270 COG2120 Uncharacterized protei 22.8 1.4E+02 0.0031 30.7 5.2 41 276-341 10-50 (237)
271 PRK13931 stationary phase surv 22.8 9E+02 0.02 25.4 12.6 33 404-436 86-129 (261)
272 cd07373 2A5CPDO_A The alpha su 22.7 2.2E+02 0.0048 29.9 6.8 72 244-329 24-108 (271)
273 PRK03743 pdxA 4-hydroxythreoni 22.7 3.7E+02 0.0079 29.4 8.4 32 404-435 258-296 (332)
274 COG0482 TrmU Predicted tRNA(5- 22.7 2.3E+02 0.0049 31.2 6.8 16 319-338 21-36 (356)
275 PF02585 PIG-L: GlcNAc-PI de-N 22.4 94 0.002 28.2 3.4 26 388-416 86-111 (128)
276 PRK06732 phosphopantothenate-- 22.1 1.2E+02 0.0025 31.1 4.4 19 316-338 31-49 (229)
277 COG2086 FixA Electron transfer 22.1 2.2E+02 0.0047 29.9 6.4 34 405-438 111-148 (260)
278 COG0052 RpsB Ribosomal protein 21.9 1.4E+02 0.0029 31.1 4.7 35 404-438 155-189 (252)
279 TIGR00288 conserved hypothetic 21.9 4.1E+02 0.0089 25.8 7.7 66 224-336 68-136 (160)
280 PRK06849 hypothetical protein; 21.7 2.2E+02 0.0047 31.4 6.8 19 316-338 19-37 (389)
281 PF03401 TctC: Tripartite tric 21.6 1.1E+02 0.0024 32.2 4.2 45 649-693 199-243 (274)
282 TIGR03499 FlhF flagellar biosy 21.5 8.2E+02 0.018 25.7 10.8 18 316-337 213-232 (282)
283 COG2236 Predicted phosphoribos 21.4 2.2E+02 0.0048 28.5 6.0 48 384-432 9-56 (192)
284 PF03668 ATP_bind_2: P-loop AT 21.3 2.3E+02 0.0051 30.1 6.4 26 299-329 250-275 (284)
285 PF02374 ArsA_ATPase: Anion-tr 20.8 2.2E+02 0.0048 30.5 6.3 67 277-367 1-71 (305)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=4.2e-174 Score=1491.49 Aligned_cols=699 Identities=76% Similarity=1.209 Sum_probs=666.8
Q ss_pred CcccccccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhh--HhhhcccCCCcHHHHHhhcceee
Q 005365 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAI 78 (700)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (700)
|+.++|+|++||+|+++++|++|||+|++||+||+++||++||+|||+++|+++. +.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 5668999999999999999999999999999999999999999999999999994 44577899999999999999999
Q ss_pred EcCCeEEEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCCCCCCceeeeecccccCCCCCCCCCCCCCchhh
Q 005365 79 VLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVE 158 (700)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (700)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||+|+||||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhHhhhhhhcCCCCCcchHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCcc
Q 005365 159 FLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLER 238 (700)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (700)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccHHHHHHHHHHHHHhhcCCCccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHH
Q 005365 239 GWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEML 318 (700)
Q Consensus 239 ~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa 318 (700)
||||||+||+|||++|+++|++|||++||+|++||||+|||+|||+||||+|.+++|+||||||.+||++||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHH
Q 005365 319 LRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEI 398 (700)
Q Consensus 319 ~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l 398 (700)
++|+++||+|+|+|+|+||.+++..++.|+++.|.+.++++++|+|+|+++.++++++|++|+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999998
Q ss_pred HHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 399 AKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 399 ~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
.+..+++|||||+|||+++++|.++++++|||+|+|+|++++.++..++.+|+..+..|++++++++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 77777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccC-------------------------
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP------------------------- 533 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g------------------------- 533 (700)
+|.++++++++.++||.+|..|++|++++++|||+++++++++||||+|...|+|
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 9999999999999999999999999999999999998999999999998766653
Q ss_pred -------------------CchhhhchhhHHHHHHHHhhcCCCccEEEEecC-Ch------hhHHHHHHHHHHHHHcCCC
Q 005365 534 -------------------YTEEKRRLKSFHPEIEELLYSDVENKEHLKESK-DL------EEQAEMKKMYSLIDQYKLN 587 (700)
Q Consensus 534 -------------------~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~G-d~------ee~~~~~~l~~li~~l~L~ 587 (700)
|+.+.||++.+++|+..+....++.+++++|+| ++ ++.+++++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 334458999999999988766667888888876 22 2334567889999999999
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHH
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 667 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ea 667 (700)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++||||||+|||||++||++|+|.+|.+|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999998768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 668 AAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 668 LAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|++|.+++++|..||+.|++|+++|++++.+
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e 753 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYE 753 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 99999999888889999999999999999865
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=9.8e-167 Score=1431.09 Aligned_cols=676 Identities=71% Similarity=1.150 Sum_probs=641.6
Q ss_pred HHHHHHHHHHHHhcCCCccchhHHHHHHHhhh--HhhhcccCCCcHHHHHhhcceeeEcCCeEEEEEcCCCceEEEEEEe
Q 005365 24 RNEILALLSRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVN 101 (700)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (700)
|++|++||+||+++||++||+|||+++|++++ +.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 78999999999999999999999999999994 3346689999999999999999999999999999999999999999
Q ss_pred cCcceeeecCHHHHhhhcccccCCCCCCCceeeeecccccCCCCCCCCCCCCCchhhhhhHhhhhhhcCCCCCcchHHHH
Q 005365 102 VHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181 (700)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (700)
++||+||+||++|||+|||+|||++.+++++|||||+|||++|||||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCC
Q 005365 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAP 261 (700)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p 261 (700)
||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCC
Q 005365 262 DPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPD 341 (700)
Q Consensus 262 ~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~ 341 (700)
||++||+|++||||+|||+|+|+||||+|.+++|+||+|||.+||++||||||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccceeEecCccceEEEEecCCCccc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHH
Q 005365 342 AVGTTCGQRLEKVYGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420 (700)
Q Consensus 342 ~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~-~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva 420 (700)
..++.|+++.|.+.++++++|+|+|+++..+ ++++|++|+++|||+..|+.++.+.+.+..+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 8899999999999999999999999999877 799999999999999999999999998777789999999999999999
Q ss_pred HHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccc
Q 005365 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAF 500 (700)
Q Consensus 421 ~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~ 500 (700)
.++++++|||+|+|+|++.+.++..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||+++..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999998888999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEeecCCCCCCCcceecCCCCccccccC--------------------------------------------Cch
Q 005365 501 TLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP--------------------------------------------YTE 536 (700)
Q Consensus 501 ~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g--------------------------------------------~~~ 536 (700)
++|+++.+.|||+++++|+++||||+|..+|.| |+.
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 999999999999999999999999999665554 334
Q ss_pred hhhchhhHHHHHHHHhhcCCCccEEEEecCCh-------hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHH
Q 005365 537 EKRRLKSFHPEIEELLYSDVENKEHLKESKDL-------EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 609 (700)
Q Consensus 537 ~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~-------ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~l 609 (700)
+.||++.+++|+..+....++.+++++|++.. ++.+++++++++++++++.++|+|+|++.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 45899999999987654445677888887642 34457789999999999999999999887677788999998
Q ss_pred HccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 610 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 610 a~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
++++|+||+||++|+||++++||||||+|||||++||++|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87689999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHh
Q 005365 690 SLGGLKRIEE 699 (700)
Q Consensus 690 s~~ar~ra~e 699 (700)
+++|++++.+
T Consensus 721 s~~a~~rV~~ 730 (784)
T TIGR02470 721 SQGGLQRIYE 730 (784)
T ss_pred HHHHHHHHHH
Confidence 9999999865
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=1e-168 Score=1344.27 Aligned_cols=547 Identities=72% Similarity=1.187 Sum_probs=471.5
Q ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhhHhhhc--ccCCCcHHHHHhhcceeeEcCCeE
Q 005365 7 TRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK--HLTEGAFGEVLRATQEAIVLPPWV 84 (700)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 84 (700)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++++++++ +..+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 699999999999999999999999999999999999999999999999876655 557899999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCCCCCCceeeeecccccCCCCCCCCCCCCCchhhhhhHhh
Q 005365 85 ALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHL 164 (700)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (700)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCcchHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCccH
Q 005365 165 SAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTA 244 (700)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 244 (700)
|||||+|++++++||||||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHC
Q 005365 245 ERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ 324 (700)
Q Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~ 324 (700)
+||+|||++|+++|++|||++||+|++||||+++||++||||||+|+|++|+||||||++||+|||||||++|..++..+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCC
Q 005365 325 GLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQG 404 (700)
Q Consensus 325 GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~ 404 (700)
|.+|.|+|+|+||.+|+..++.|+++.|++.++++.+|+|+||++.++++++|+||+++|||++.|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
+||+||+||++++++|.++++++|+|+|+|.|++++.||..++.+|+.++.+|||+|++++|.++|+.||+|||+|+||+
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhh
Q 005365 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 553 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~ 553 (700)
++.++.+|||+++.+|++|++|+++|||++|+|||++||||+|..+|+|+.+++|++..+++.+++|++
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llf 549 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLF 549 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999975
No 4
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.7e-50 Score=474.66 Aligned_cols=396 Identities=24% Similarity=0.428 Sum_probs=316.1
Q ss_pred ceEEEEEccccccccCCc-CCC-CCcCcchhhhHHHHHHHHHHHHHHHHHCC--CceeeccEEEeccCCC-CCCCCCccc
Q 005365 276 VFNVVILTPHGYFAQDDV-LGY-PDTGGQVVYILDQVRALEDEMLLRIKQQG--LDITPQILIITRLLPD-AVGTTCGQR 350 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~-lG~-p~~GG~~vyvld~araL~~eLa~~L~~~G--heV~~~i~VvT~~~p~-~~~~~~~~~ 350 (700)
.|+|++||.||.|.+++. +|+ +|+|||.+||+ +||++|+++| |+|+ |+||...+ ..+..|.++
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 589999999999987776 885 99999999999 5555668898 8999 99998754 344556666
Q ss_pred eeEe------------cCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHH-------c----CCCCe
Q 005365 351 LEKV------------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKE-------L----QGKPD 407 (700)
Q Consensus 351 ~e~i------------~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~-------~----~~~pD 407 (700)
.|.+ ...++++|+|+|+++... ++++..+|||+..|...+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~----~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDK----YIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCCC----CcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5443 344689999999998633 5778999999999999999876541 1 12499
Q ss_pred EEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCC----CCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 408 LIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYP----DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 408 lIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~----~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
|||+|||+++.++..+++.+++|+|+|.|++...++. .+...|..+...|++..++.+|..+++.||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999998766643 222345566778899999999999999999999999999
Q ss_pred HHhhhhhhcccccc---------------ccccCCCeEEeecCCCCCCCccee---------------------------
Q 005365 484 IAGSKDTVGQYESH---------------TAFTLPGLYRVVHGIDVFDPKFNI--------------------------- 521 (700)
Q Consensus 484 ~~~~k~~~~~y~~~---------------~~~~~p~l~~v~nGId~~~~k~~v--------------------------- 521 (700)
++.+...++.|... .+..+|.+.+|++|+|+ .+|..
T Consensus 393 ~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~--~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l 470 (1050)
T TIGR02468 393 IEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEF--SHIVPHDGDMDGETEGNEEHPAKPDPPIWSEI 470 (1050)
T ss_pred HHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcH--HHccCCCccccchhcccccccccccchhhHHH
Confidence 87554444322110 01125678888999883 22211
Q ss_pred ----cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccE-EEEecCChhh------HHHHHHHHHHHHHcCCCCcE
Q 005365 522 ----VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE-HLKESKDLEE------QAEMKKMYSLIDQYKLNGQF 590 (700)
Q Consensus 522 ----Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l-~i~g~Gd~ee------~~~~~~l~~li~~l~L~~~V 590 (700)
..+.....+|+|++.+.||+..|++|+..+....+...+ +++|.++..+ .++...+.++++++++.++|
T Consensus 471 ~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V 550 (1050)
T TIGR02468 471 MRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQV 550 (1050)
T ss_pred HhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeE
Confidence 122333568899999999999999999998754333334 3455543211 23456788999999999999
Q ss_pred EEeccccCcCChhHHHHHHHccC----cEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHH
Q 005365 591 RWISSQMNRVRNGELYRYICDTK----GAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 591 ~flG~~~d~v~~~el~~~la~~a----DvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
.|+| .++.+++..+|+. + |+||+||++|+||++++||||||+|||||+.||+.|+|.++.+|++++|+|++
T Consensus 551 ~FlG----~v~~edvp~lYr~-Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~e 625 (1050)
T TIGR02468 551 AYPK----HHKQSDVPDIYRL-AAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQ 625 (1050)
T ss_pred EecC----CCCHHHHHHHHHH-hhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHH
Confidence 9999 5556888888875 5 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++|++|..++ +|++.|++|+++|++++.
T Consensus 626 aLA~AL~~LL----~Dpelr~~m~~~gr~~v~ 653 (1050)
T TIGR02468 626 AIADALLKLV----ADKQLWAECRQNGLKNIH 653 (1050)
T ss_pred HHHHHHHHHh----hCHHHHHHHHHHHHHHHH
Confidence 9999999998 899999999999999875
No 5
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=9.9e-51 Score=442.69 Aligned_cols=440 Identities=40% Similarity=0.588 Sum_probs=379.4
Q ss_pred ecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCccchhhhhcC
Q 005365 193 MLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGR 272 (700)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 272 (700)
|.||++++.+.+|+++.+|+..++.. .+||+..|.+.++..++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCcccee
Q 005365 273 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLE 352 (700)
Q Consensus 273 ~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e 352 (700)
++. ++|.||+||+++|+++++++|+.++..+.-+++.+++++|.|++...|...+ +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 454 8999999999999999999999999999999999998899999999887755 3445
Q ss_pred EecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEE
Q 005365 353 KVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (700)
Q Consensus 353 ~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V 432 (700)
...++.+++|+++|++ ...+|. ..+||++..|+ .+...+.+.+.+ ||++|.++++++..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 5556668999999994 344566 77899999998 455566666666 999999999999999999999999999
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCC-eEEeecC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPG-LYRVVHG 511 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~-l~~v~nG 511 (700)
++.|.+...++...+.+|+.+...|+++++|+++...++.+| ++++++++++....+++|+++..++.|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999998 8888999
Q ss_pred CCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecC-----ChhhHHHHHHHHHHHHHcCC
Q 005365 512 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESK-----DLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 512 Id~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~G-----d~ee~~~~~~l~~li~~l~L 586 (700)
++.+.++++++++|.|..++++... .+.+.+.+ ...++..+.++|+. +.++.+++++|+++++++++
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~------~~~~~i~~--~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFT------LLHDSIPE--PSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHH------hhhcccCC--CCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 9999999999999999998887221 11111111 11122333344422 66788899999999999999
Q ss_pred C-CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 587 N-GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 587 ~-~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
. +.|.|+.. ....+.|++++++-.+|++|+. |.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.
T Consensus 344 ~g~~v~~~~s----~~~~~~yrl~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~ 417 (495)
T KOG0853|consen 344 LGQFVWFLPS----TTRVAKYRLAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQ 417 (495)
T ss_pred cCceEEEecC----CchHHHHHHHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-ch
Confidence 5 54555552 3345669999998889999999 9999999999999999999999999999999999999999 55
Q ss_pred H---HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 666 E---QAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 666 e---aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+ .+|+++.++. .||++|.+|+++|++++++
T Consensus 418 e~~~~~a~~~~kl~----~~p~l~~~~~~~G~~rV~e 450 (495)
T KOG0853|consen 418 EAVAELADALLKLR----RDPELWARMGKNGLKRVKE 450 (495)
T ss_pred HHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHH
Confidence 5 4777777665 9999999999999999986
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=1.1e-44 Score=405.82 Aligned_cols=387 Identities=27% Similarity=0.485 Sum_probs=286.3
Q ss_pred eEEEEEccccccccCC-cCCC-CCcCcchhhhHHHHHHHHHHHHHHHHHCCC--ceeeccEEEeccCCCCC-CCCCccce
Q 005365 277 FNVVILTPHGYFAQDD-VLGY-PDTGGQVVYILDQVRALEDEMLLRIKQQGL--DITPQILIITRLLPDAV-GTTCGQRL 351 (700)
Q Consensus 277 mkI~iis~h~~~~~~~-~lG~-p~~GG~~vyvld~araL~~eLa~~L~~~Gh--eV~~~i~VvT~~~p~~~-~~~~~~~~ 351 (700)
+||+++|+|++|+|.+ ++|+ |+.||+++|+. +|+++|+++|| +|+ |+|+..++.. ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999988 7785 99999999999 67777799997 999 9998755421 22333333
Q ss_pred eEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcE
Q 005365 352 EKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ 431 (700)
Q Consensus 352 e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~ 431 (700)
+.+ .++++++|+|+... .|.++..+++|+..|...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 24789999988653 23445667888888887777766543 23799999999888899999999999999
Q ss_pred EEEecCCccccCC---CCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEe
Q 005365 432 CTIAHALEKTKYP---DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRV 508 (700)
Q Consensus 432 V~t~H~l~~~~~~---~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v 508 (700)
|+|.|+....... .....+..+...|++..+...|+.+++.+|.||++|..++. +.+..+ ..+....+.+|
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~---~~~~~~---~~~~~~ki~vI 214 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIE---EQYALY---DSYQPERMQVI 214 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHH---HHHHhc---cCCCccceEEE
Confidence 9999986433211 11111222223344445555678899999999999976543 222111 11222357788
Q ss_pred ecCCCCCCCccee------------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEE-EecCChh
Q 005365 509 VHGIDVFDPKFNI------------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL-KESKDLE 569 (700)
Q Consensus 509 ~nGId~~~~k~~v------------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i-~g~Gd~e 569 (700)
+||+|. .++.. .+++....+|+|++.+.||++.+++|+..+.......++++ +|.|+..
T Consensus 215 pnGvd~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~ 292 (439)
T TIGR02472 215 PPGVDL--SRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDI 292 (439)
T ss_pred CCCcCh--hhcCCCCccccchhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCcccc
Confidence 999984 22211 12233457889999999999999999986432222334443 4444321
Q ss_pred h------HHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHcc---CcEEEeCCCCCCccHHHHHHHHcCCCEE
Q 005365 570 E------QAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT---KGAFVQPALYEAFGLTVVEAMTCGLPTF 640 (700)
Q Consensus 570 e------~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~---aDvfV~PS~~E~fGl~vlEAMA~GlPVV 640 (700)
. .++.+++.++++++++.++|+|+| .++.+++..+|+.+ +|+||+||.+|+||++++||||||+|||
T Consensus 293 ~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV 368 (439)
T TIGR02472 293 RKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIV 368 (439)
T ss_pred ccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEE
Confidence 1 123455677889999999999999 55568888888752 2999999999999999999999999999
Q ss_pred EcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 641 ATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 641 AT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +|++.+++|+++|++++.+
T Consensus 369 ~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~ 423 (439)
T TIGR02472 369 ATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRNGIEGVRR 423 (439)
T ss_pred EeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 8999999999999998865
No 7
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=4.1e-37 Score=339.90 Aligned_cols=371 Identities=20% Similarity=0.245 Sum_probs=267.8
Q ss_pred EEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCcc
Q 005365 279 VVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 358 (700)
Q Consensus 279 I~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~ 358 (700)
|++++.|..|.. +++..+.||.++|+. +|+++|+++||+|+ |+|+......+. ..+ ..+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~~~---~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP----VVE---VAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC----ccc---cCC
Confidence 578888887653 355667799999999 77777899999999 999764322111 111 123
Q ss_pred ceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 359 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 359 ~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
++++++++.....+ .+...+..++..|.....+.+......+||+||+|.+.+++++..+++..++|+|+|.|+.
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 67888887654322 1111122223334333443333333458999999998888888888888999999999987
Q ss_pred ccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCc
Q 005365 439 EKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 518 (700)
Q Consensus 439 ~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k 518 (700)
...+. ..+..... .........|+..++.+|.|+++|+...+.+.+.++ .....+..++||++.. .
T Consensus 135 ~~~~~----~~~~~~~~-~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~-------~~~~ki~vi~ngvd~~--~ 200 (405)
T TIGR03449 135 AAVKN----AALADGDT-PEPEARRIGEQQLVDNADRLIANTDEEARDLVRHYD-------ADPDRIDVVAPGADLE--R 200 (405)
T ss_pred HHHHH----HhccCCCC-CchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHHcC-------CChhhEEEECCCcCHH--H
Confidence 53220 01100000 000111223667899999999999876654443332 1123467889999741 1
Q ss_pred cee-----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCC--ccEEEEecCChhhHHHHHHHHHHHHHcC
Q 005365 519 FNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE--NKEHLKESKDLEEQAEMKKMYSLIDQYK 585 (700)
Q Consensus 519 ~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~--~~l~i~g~Gd~ee~~~~~~l~~li~~l~ 585 (700)
+.. ++++....+|.|++.+.||++.++++++.+....++ ..++++|+++++..++.+++++++++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~ 280 (405)
T TIGR03449 201 FRPGDRATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELG 280 (405)
T ss_pred cCCCcHHHHHHhcCCCCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcC
Confidence 110 123344678999999999999999999999877665 5667777543221134467888999999
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
+.++|+|+| .++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.||.+|++.++.+|++++++|+
T Consensus 281 l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~ 355 (405)
T TIGR03449 281 IADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDP 355 (405)
T ss_pred CCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCH
Confidence 999999999 5667899999997 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 666 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 666 eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++++++|.+++ +|++.+++|++++++.++
T Consensus 356 ~~la~~i~~~l----~~~~~~~~~~~~~~~~~~ 384 (405)
T TIGR03449 356 ADWADALARLL----DDPRTRIRMGAAAVEHAA 384 (405)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHH
Confidence 99999999998 899999999999998764
No 8
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=1e-35 Score=325.63 Aligned_cols=372 Identities=28% Similarity=0.443 Sum_probs=278.9
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+|++.|++|.. .-|.|+.||.++++. +|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 6889998876532 235689999999999 66667799999999 998654322111 01112
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.++.+++++..... ..++..+++++..|...+.+.+.... .+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRREG-GRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhcC-CCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36778887765431 12233456666666666666665532 3899999999888888888999999999999998
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
............|. +........|+.+++.+|.|+++|......+.+..... ......++||++..
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~-------~~~~~vi~ng~~~~-- 199 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAY-------PRRIRVVPPGVDLE-- 199 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHcccc-------ccccEEECCCCCcc--
Confidence 76543222111111 11222233477889999999999987765544433211 12266788998732
Q ss_pred cce------------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhH-HHHHHHHHHHHHc
Q 005365 518 KFN------------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQ-AEMKKMYSLIDQY 584 (700)
Q Consensus 518 k~~------------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~-~~~~~l~~li~~l 584 (700)
.+. ..++.....+|.|++.+.||++.+++++..+....++..++++|++..... .....++++++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~ 279 (398)
T cd03800 200 RFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELAREL 279 (398)
T ss_pred ceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhc
Confidence 111 112334467899999999999999999999987777788888887754322 2234567888889
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCC
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 664 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D 664 (700)
++.++|.|+| .++.+++..+++. +|++++||..|+||++++|||+||+|||+|+.||..|+++++.+|++++++|
T Consensus 280 ~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~ 354 (398)
T cd03800 280 GVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRD 354 (398)
T ss_pred CCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCC
Confidence 9999999999 6667899999997 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 665 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 665 ~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++++|.+++ +|++.+++|+++|++++++
T Consensus 355 ~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~ 385 (398)
T cd03800 355 PEALAAALRRLL----TDPALRRRLSRAGLRRARA 385 (398)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 999999999998 8999999999999998854
No 9
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=7.6e-36 Score=336.73 Aligned_cols=376 Identities=16% Similarity=0.184 Sum_probs=252.6
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCc-cceeEe-
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-QRLEKV- 354 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~-~~~e~i- 354 (700)
|||+++|.+.+|. ..+||...++. .|+++|+++||+|+ |+|+.++........ .....+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998864 34799999999 66667799999999 999876542111000 001110
Q ss_pred --------cCccceEEEEecCCCcccccccccccccchhhH---H---HHHHHHHHHHHHHcCCCCeEEEEcCCCchHHH
Q 005365 355 --------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYL---E---TYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420 (700)
Q Consensus 355 --------~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l---~---~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva 420 (700)
...+++++++++.... ..+..++.+. . .|...+...+. ....+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~~~-~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEFAE-GLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHHHH-hcCCCCceEEECCcHHHHHH
Confidence 1124677887765321 1222223222 1 23344444443 33458999999999999999
Q ss_pred HHHHHhc-----CCcEEEEecCCccccCCCC------chhhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHHHhhh
Q 005365 421 SLLAHKL-----GVTQCTIAHALEKTKYPDS------DIYWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSK 488 (700)
Q Consensus 421 ~lla~~~-----giP~V~t~H~l~~~~~~~~------~~~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k 488 (700)
.++++.. ++|+|+|+|++........ +..+..+. ....+...+...+.+++.||.|+|+|+..++.+.
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888653 7999999999854321100 00111000 0000111122345678999999999987765443
Q ss_pred hhhccccc--cccccCCCeEEeecCCCCCCCccee------------------------------cC-CCCccccccCCc
Q 005365 489 DTVGQYES--HTAFTLPGLYRVVHGIDVFDPKFNI------------------------------VS-PGADMSIYFPYT 535 (700)
Q Consensus 489 ~~~~~y~~--~~~~~~p~l~~v~nGId~~~~k~~v------------------------------Ip-~G~d~~~F~g~~ 535 (700)
+....+.- ........+..|+||||.. .++. ++ +.....+|+||+
T Consensus 214 ~~~~~~gl~~~~~~~~~ki~vI~NGid~~--~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl 291 (466)
T PRK00654 214 TPEFGYGLEGLLRARSGKLSGILNGIDYD--IWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRL 291 (466)
T ss_pred cccCCcChHHHHHhcccCceEecCCCCcc--ccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeecc
Confidence 31100000 0001123477899999842 1110 11 233467789999
Q ss_pred hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEE-eccccCcCChhHHHHHHHccCc
Q 005365 536 EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRW-ISSQMNRVRNGELYRYICDTKG 614 (700)
Q Consensus 536 ~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~f-lG~~~d~v~~~el~~~la~~aD 614 (700)
.++||++.+++|++.+... +.+++++|.|+.+ +.+++++++++++ +++.+ .|+ +.+.+..+++. +|
T Consensus 292 ~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~~---~~~~l~~l~~~~~--~~v~~~~g~-----~~~~~~~~~~~-aD 358 (466)
T PRK00654 292 TEQKGLDLVLEALPELLEQ--GGQLVLLGTGDPE---LEEAFRALAARYP--GKVGVQIGY-----DEALAHRIYAG-AD 358 (466)
T ss_pred ccccChHHHHHHHHHHHhc--CCEEEEEecCcHH---HHHHHHHHHHHCC--CcEEEEEeC-----CHHHHHHHHhh-CC
Confidence 9999999999999998754 6778888877643 3456777887775 45665 452 23445567775 99
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC------CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg------~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++++|+++++++|.++++.. .|++.+.+
T Consensus 359 v~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~-~~~~~~~~ 437 (466)
T PRK00654 359 MFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELY-RQPPLWRA 437 (466)
T ss_pred EEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHh-cCHHHHHH
Confidence 9999999999999999999999999999999999999988 8999999999999999999987322 47788999
Q ss_pred HHHHHHH
Q 005365 689 ISLGGLK 695 (700)
Q Consensus 689 ms~~ar~ 695 (700)
|+++|.+
T Consensus 438 ~~~~~~~ 444 (466)
T PRK00654 438 LQRQAMA 444 (466)
T ss_pred HHHHHhc
Confidence 9988863
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.8e-34 Score=326.13 Aligned_cols=382 Identities=15% Similarity=0.139 Sum_probs=257.5
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCcc-----ce
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQ-----RL 351 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~-----~~ 351 (700)
|||+++|...+|- -.+||...++- .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998763 34799999999 66666799999999 9998765432110000 00
Q ss_pred e--------E----ecCccceEEEEecCCCccccccc---ccc--cccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCC
Q 005365 352 E--------K----VYGTKYSDILRVPFRTEKGVVRK---WIS--RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS 414 (700)
Q Consensus 352 e--------~----i~~~~~v~I~rvp~~~~~~~~~~---~ls--r~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~ 414 (700)
+ . ....++++++++..... +.. ..+ ..+.......|...+...+.+ ...+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~---~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw 137 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSL---FDRPGGIYGDDYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDW 137 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHH---cCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCc
Confidence 0 0 01113566666654321 000 000 011111223344555554443 3568999999999
Q ss_pred CchHHHHHHHHhcC---CcEEEEecCCccccCCCC-ch-----hhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 415 DGNIVASLLAHKLG---VTQCTIAHALEKTKYPDS-DI-----YWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 415 ~~~lva~lla~~~g---iP~V~t~H~l~~~~~~~~-~~-----~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
.+++++.++++..+ +|+|+|+|++........ .. .|..+. ..+.+...+...+.+++.||.|+++|+..+
T Consensus 138 ~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~ 217 (473)
T TIGR02095 138 HTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYA 217 (473)
T ss_pred HHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHH
Confidence 99999998888776 999999999864321111 00 011000 001111123335678999999999998776
Q ss_pred Hhhhhhhccccccc--cccCCCeEEeecCCCCCCCccee------------------------------cC--CCCcccc
Q 005365 485 AGSKDTVGQYESHT--AFTLPGLYRVVHGIDVFDPKFNI------------------------------VS--PGADMSI 530 (700)
Q Consensus 485 ~~~k~~~~~y~~~~--~~~~p~l~~v~nGId~~~~k~~v------------------------------Ip--~G~d~~~ 530 (700)
+.+......+.-.. ......+..|+||||.. .++. ++ ++....+
T Consensus 218 ~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~--~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~ 295 (473)
T TIGR02095 218 REILTPEFGYGLDGVLKARSGKLRGILNGIDTE--VWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFG 295 (473)
T ss_pred HHhcCCcCCccchhHHHhcCCCeEEEeCCCCcc--ccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEE
Confidence 54433210010000 00123577899999842 2210 11 1344578
Q ss_pred ccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH
Q 005365 531 YFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610 (700)
Q Consensus 531 F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la 610 (700)
|+|++.++||++.+++|++.+... +.+++++|.|+.+ ..+++++++++++ +++.|.+ ..+.+++..+++
T Consensus 296 ~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~~---~~~~l~~~~~~~~--~~v~~~~----~~~~~~~~~~~~ 364 (473)
T TIGR02095 296 VISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDPE---LEEALRELAERYP--GNVRVII----GYDEALAHLIYA 364 (473)
T ss_pred EEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCHH---HHHHHHHHHHHCC--CcEEEEE----cCCHHHHHHHHH
Confidence 999999999999999999998754 4778888887642 3356677776654 6788887 445567778888
Q ss_pred ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC------CeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 005365 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQAAEILVDFFEKCKADPS 684 (700)
Q Consensus 611 ~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg------~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~ 684 (700)
. +|++|+||.+|+||++++|||+||+|||+|++||+.|+|.++ .+|++++++|+++++++|.++++....|++
T Consensus 365 ~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~ 443 (473)
T TIGR02095 365 G-ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPS 443 (473)
T ss_pred h-CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 6 999999999999999999999999999999999999999998 899999999999999999998854444999
Q ss_pred HHHHHHHHHHH
Q 005365 685 YWDKISLGGLK 695 (700)
Q Consensus 685 ~~~~ms~~ar~ 695 (700)
.|++|++++++
T Consensus 444 ~~~~~~~~~~~ 454 (473)
T TIGR02095 444 LWEALQKNAMS 454 (473)
T ss_pred HHHHHHHHHhc
Confidence 99999998864
No 11
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=3.3e-34 Score=316.82 Aligned_cols=346 Identities=15% Similarity=0.190 Sum_probs=243.5
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++.++ |..||.++++. +|++.|+++||+|+ |+|+..+...+. +.. .
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~~~--~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------RYL--T 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------ccc--c
Confidence 7999998776 45699999999 67777799999999 999764322111 111 2
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchH--HHHHHHHhcCCcEEEEe
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI--VASLLAHKLGVTQCTIA 435 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~l--va~lla~~~giP~V~t~ 435 (700)
.++.++++|...... ...+ .....+...+.+.+.+. +|||||+|.....+ .+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~-~~~~~~~~~l~~~~~~~---~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTL-PTFFGTFPLLRNILIRE---RITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Cccc-cchhhhHHHHHHHHHhc---CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888887653210 0011 11111222233333333 89999999865543 46677888999999999
Q ss_pred cCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC-
Q 005365 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV- 514 (700)
Q Consensus 436 H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~- 514 (700)
|+..... .....+ ..+ ..+..++++|.|+++|....+......+ ........++||+|.
T Consensus 121 h~~~~~~--~~~~~~---------~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~-------~~~~k~~vi~ngvd~~ 180 (398)
T cd03796 121 HSLFGFA--DASSIH---------TNK--LLRFSLADVDHVICVSHTSKENTVLRAS-------LDPERVSVIPNAVDSS 180 (398)
T ss_pred ccccccc--chhhHH---------hhH--HHHHhhccCCEEEEecHhHhhHHHHHhC-------CChhhEEEEcCccCHH
Confidence 9864211 000000 001 1345688999999999776542211111 112246788999983
Q ss_pred -CCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEe
Q 005365 515 -FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI 593 (700)
Q Consensus 515 -~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~fl 593 (700)
+.+.....+++....+|.|+..+.||++.+++++..+....++..+.++|.|. ..+.++++++++++.++|+|+
T Consensus 181 ~f~~~~~~~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~-----~~~~l~~~~~~~~l~~~v~~~ 255 (398)
T cd03796 181 DFTPDPSKRDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP-----KRILLEEMREKYNLQDRVELL 255 (398)
T ss_pred HcCCCcccCCCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc-----hHHHHHHHHHHhCCCCeEEEe
Confidence 11111112234446779999999999999999999988777778888887663 235688889999999999999
Q ss_pred ccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHH
Q 005365 594 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILV 673 (700)
Q Consensus 594 G~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~ 673 (700)
| .++.+++..+++. +|++|+||..|+||++++||||||+|||+|+.||.+|++.++. ++++++ |+++++++|.
T Consensus 256 G----~~~~~~~~~~l~~-ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~~-~~~~l~~~l~ 328 (398)
T cd03796 256 G----AVPHERVRDVLVQ-GHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAEP-DVESIVRKLE 328 (398)
T ss_pred C----CCCHHHHHHHHHh-CCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecCC-CHHHHHHHHH
Confidence 9 6667899999997 9999999999999999999999999999999999999998764 455544 8999999999
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 674 DFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 674 ~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++ .++.....+++++++++.+
T Consensus 329 ~~l----~~~~~~~~~~~~~~~~~~~ 350 (398)
T cd03796 329 EAI----SILRTGKHDPWSFHNRVKK 350 (398)
T ss_pred HHH----hChhhhhhHHHHHHHHHHh
Confidence 998 5666566778888887765
No 12
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=7.1e-34 Score=315.38 Aligned_cols=365 Identities=13% Similarity=0.118 Sum_probs=249.7
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC--CCCC-CCCCccceeE
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL--PDAV-GTTCGQRLEK 353 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~--p~~~-~~~~~~~~e~ 353 (700)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+.. |... ...+......
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998776 45689999998 67777799999999 999652 2110 0000100001
Q ss_pred ecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc--hHHHHHHHHhcCCcE
Q 005365 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQ 431 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~--~lva~lla~~~giP~ 431 (700)
....++++++|+|...... ...+. .+..+ ..|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLHL-GSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHHH-HHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1112468999988643210 00000 11111 12333333333332225899999987543 456777888899999
Q ss_pred EEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecC
Q 005365 432 CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 511 (700)
Q Consensus 432 V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nG 511 (700)
++++|+.+........ .++. ....++.. ..|+.+++.||.|+++|...++.+++. + .....+.+++||
T Consensus 135 v~~~~d~~~~~~~~~~-~~~~-~~~~~~~~--~~~~~~~~~ad~ii~~S~~~~~~~~~~-~-------~~~~~i~vi~ng 202 (412)
T PRK10307 135 WLHIQDYEVDAAFGLG-LLKG-GKVARLAT--AFERSLLRRFDNVSTISRSMMNKAREK-G-------VAAEKVIFFPNW 202 (412)
T ss_pred EEEeccCCHHHHHHhC-CccC-cHHHHHHH--HHHHHHHhhCCEEEecCHHHHHHHHHc-C-------CCcccEEEECCC
Confidence 9999986532110000 0000 00011111 237788999999999997776544332 1 122346778999
Q ss_pred CCCCCCccee--------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHH
Q 005365 512 IDVFDPKFNI--------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKM 577 (700)
Q Consensus 512 Id~~~~k~~v--------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l 577 (700)
++. +.+.- ++++....+|.|++.+.||++.+++|++.+. ..++..++++|.|. ..+++
T Consensus 203 vd~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~kg~~~li~a~~~l~-~~~~~~l~ivG~g~-----~~~~l 274 (412)
T PRK10307 203 SEV--ARFQPVADADVDALRAQLGLPDGKKIVLYSGNIGEKQGLELVIDAARRLR-DRPDLIFVICGQGG-----GKARL 274 (412)
T ss_pred cCH--hhcCCCCccchHHHHHHcCCCCCCEEEEEcCccccccCHHHHHHHHHHhc-cCCCeEEEEECCCh-----hHHHH
Confidence 984 22211 1233346789999999999999999998874 34566777777653 33567
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCC----ccHHHHHHHHcCCCEEEcCCCC--ccccc
Q 005365 578 YSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA----FGLTVVEAMTCGLPTFATCKGG--PAEII 651 (700)
Q Consensus 578 ~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~----fGl~vlEAMA~GlPVVAT~~GG--~~EiI 651 (700)
+++++++++. +|+|+| .++.+++..+++. +|++|+||..|+ +|.+++|||+||+|||+|+.|| ..|++
T Consensus 275 ~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i 348 (412)
T PRK10307 275 EKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLV 348 (412)
T ss_pred HHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHH
Confidence 8888889987 699999 5567899999997 999999999998 5778899999999999999876 46888
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 652 VNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 652 ~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
. .+|++++++|++++|++|.+++ +|++.+++|+++|++++++
T Consensus 349 ~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~ 390 (412)
T PRK10307 349 E--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAREYAER 390 (412)
T ss_pred h--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 6 5999999999999999999998 8999999999999999875
No 13
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.3e-33 Score=322.90 Aligned_cols=408 Identities=15% Similarity=0.165 Sum_probs=267.5
Q ss_pred HHhhcCCCccchhhhhc--CC--CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceee
Q 005365 255 LDLLEAPDPCTLETFLG--RI--PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITP 330 (700)
Q Consensus 255 ~~~~~~p~~~~~~~~~~--~~--pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~ 330 (700)
.++.+.+|..-+..|+. +. .+.|||++||....|- ..+||..-++- .|.++|+++||+|.
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~- 519 (977)
T PLN02939 456 LSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE- 519 (977)
T ss_pred HHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE-
Confidence 45666777666666653 22 2459999999988764 46899999988 56666799999999
Q ss_pred ccEEEeccCCCCCCCCC-cc-----cee-EecC-----------ccceEEEEecCCCcccccccccccccchh------h
Q 005365 331 QILIITRLLPDAVGTTC-GQ-----RLE-KVYG-----------TKYSDILRVPFRTEKGVVRKWISRFEVWP------Y 386 (700)
Q Consensus 331 ~i~VvT~~~p~~~~~~~-~~-----~~e-~i~~-----------~~~v~I~rvp~~~~~~~~~~~lsr~~i~~------~ 386 (700)
|+++.++....... .. ..+ .+.+ .+++.++.+...... .+..|..++. .
T Consensus 520 ---VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~R 592 (977)
T PLN02939 520 ---IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFKR 592 (977)
T ss_pred ---EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHHH
Confidence 99998753320000 00 000 0100 123444444211000 0122222331 1
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHH------hcCCcEEEEecCCccccCCC------Cchhhhhcc
Q 005365 387 LETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH------KLGVTQCTIAHALEKTKYPD------SDIYWKNLD 454 (700)
Q Consensus 387 l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~------~~giP~V~t~H~l~~~~~~~------~~~~w~~~~ 454 (700)
+..|...++..+. ..+.+|||||+|.|..++++.++.+ ..++|+|+|+|++....... .+..|..+.
T Consensus 593 F~~FsrAaLe~~~-~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~ 671 (977)
T PLN02939 593 FSYFSRAALELLY-QSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLD 671 (977)
T ss_pred HHHHHHHHHHHHH-hcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHcc
Confidence 2233444444443 3356899999999999997554433 23579999999986443211 111111110
Q ss_pred --ccc--chhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccc-cccccccCCCeEEeecCCCCC--CCcce-------
Q 005365 455 --DKY--HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQY-ESHTAFTLPGLYRVVHGIDVF--DPKFN------- 520 (700)
Q Consensus 455 --~~y--~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y-~~~~~~~~p~l~~v~nGId~~--~~k~~------- 520 (700)
... .+...+..-+..+..||.|+|+|+..+..+....+.- .......-..+..|+||||.. .+...
T Consensus 672 ~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Y 751 (977)
T PLN02939 672 RPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQY 751 (977)
T ss_pred ChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCcccccccccc
Confidence 000 0111121223456679999999998887665422110 000111223578899999842 22100
Q ss_pred -------------------ecC---CCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHH
Q 005365 521 -------------------IVS---PGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMY 578 (700)
Q Consensus 521 -------------------vIp---~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~ 578 (700)
-++ +......|+||+.++||++.+++|+..+.. .+..++++|.|.. ..+.+.++
T Consensus 752 s~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGdGp~--~~~e~eL~ 827 (977)
T PLN02939 752 NANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGSSPV--PHIQREFE 827 (977)
T ss_pred ChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeCCCc--HHHHHHHH
Confidence 011 123456789999999999999999988874 3567888887732 23456788
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc-----
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN----- 653 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d----- 653 (700)
++++++++.++|.|+| ..+......+|+. +|+||+||++|+||++++|||+||+|+|++++||+.|+|.+
T Consensus 828 ~La~~l~l~drV~FlG----~~de~lah~IYAa-ADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~ 902 (977)
T PLN02939 828 GIADQFQSNNNIRLIL----KYDEALSHSIYAA-SDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDET 902 (977)
T ss_pred HHHHHcCCCCeEEEEe----ccCHHHHHHHHHh-CCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccc
Confidence 8999999999999999 4444556778886 99999999999999999999999999999999999999976
Q ss_pred ----CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 654 ----GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 654 ----g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
+.+||+++++|+++++++|.+++..+..||+.|++|++++.+
T Consensus 903 i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~ 948 (977)
T PLN02939 903 IPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN 948 (977)
T ss_pred cccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 579999999999999999999886556789999999988753
No 14
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.7e-33 Score=312.08 Aligned_cols=259 Identities=18% Similarity=0.218 Sum_probs=203.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHH--hcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAH--KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~--~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~ 481 (700)
.+||+||+|++..+..+..+++ ..+.|.++++|+....... + ...+.. .....++++|.|+++|.
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~-----~---~~~~~~-----~~~~~~~~ad~vv~~S~ 183 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE-----V---LNHYTP-----EYQQLFRRGDLMLPISD 183 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch-----h---hhhhhH-----HHHHHHHhCCEEEECCH
Confidence 4799999999887777776665 3445778899986432110 0 001110 12346789999999997
Q ss_pred HHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee----cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCC
Q 005365 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI----VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (700)
Q Consensus 482 ~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v----Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~ 557 (700)
..++.+.+. + .....+.+++||++. ..+.. .+......+|+|++.+.||++.++++++.+....++
T Consensus 184 ~~~~~l~~~-g-------~~~~ki~vi~nGvd~--~~f~~~~~~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~ 253 (406)
T PRK15427 184 LWAGRLQKM-G-------CPPEKIAVSRMGVDM--TRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQGVA 253 (406)
T ss_pred HHHHHHHHc-C-------CCHHHEEEcCCCCCH--HHcCCCccccCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCC
Confidence 765543321 1 111236678899983 22221 112223467899999999999999999999877777
Q ss_pred ccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC------CCccHHHHH
Q 005365 558 NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVE 631 (700)
Q Consensus 558 ~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~------E~fGl~vlE 631 (700)
..+.++|.|+ ..++++++++++++.++|.|+| .++.+++..+|+. +|+||+||.. ||||++++|
T Consensus 254 ~~l~ivG~G~-----~~~~l~~~~~~~~l~~~V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llE 323 (406)
T PRK15427 254 FRYRILGIGP-----WERRLRTLIEQYQLEDVVEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALME 323 (406)
T ss_pred EEEEEEECch-----hHHHHHHHHHHcCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHH
Confidence 7888888763 3467889999999999999999 6667899999997 9999999974 999999999
Q ss_pred HHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHHh
Q 005365 632 AMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA-DPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 632 AMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~-dp~~~~~ms~~ar~ra~e 699 (700)
|||||+|||+|+.||.+|+|.+|.+|++++++|++++|++|.+++ + ||+.+++|+++|++++.+
T Consensus 324 Ama~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~ 388 (406)
T PRK15427 324 AMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFS----QLDTDELAPVVKRAREKVET 388 (406)
T ss_pred HHhCCCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 7 999999999999999875
No 15
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=5.2e-33 Score=314.19 Aligned_cols=383 Identities=16% Similarity=0.151 Sum_probs=255.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCc--ccee---
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG--QRLE--- 352 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~--~~~e--- 352 (700)
||+++|+..+|- ..+||...++. .|+++|+++||+|+ |+|+.++........ ....
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999987754 36899999999 56666799999999 999876543211000 0000
Q ss_pred ------------EecCccceEEEEecCCCccc--cc--ccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc
Q 005365 353 ------------KVYGTKYSDILRVPFRTEKG--VV--RKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG 416 (700)
Q Consensus 353 ------------~i~~~~~v~I~rvp~~~~~~--~~--~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~ 416 (700)
.....+++.+++++...... .+ ..+.....-...+..|...+...+.+ ...+|||||+|.|.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~~t 140 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDWHT 140 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECchHH
Confidence 00112356777665433210 00 00000011111122344445544444 246899999999999
Q ss_pred hHHHHHHHHhc------CCcEEEEecCCccccCCCCc------hhhh--hcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 417 NIVASLLAHKL------GVTQCTIAHALEKTKYPDSD------IYWK--NLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 417 ~lva~lla~~~------giP~V~t~H~l~~~~~~~~~------~~w~--~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
++++..+++.. ++|+|+|+|++......... ..|. .....+.+...+..++.++..||.|+++|..
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 98888887763 89999999998654321110 0010 0000111222344577889999999999987
Q ss_pred HHHhhhhhhcccc--ccccccCCCeEEeecCCCCCCCccee------------------------------c--CCCCcc
Q 005365 483 EIAGSKDTVGQYE--SHTAFTLPGLYRVVHGIDVFDPKFNI------------------------------V--SPGADM 528 (700)
Q Consensus 483 ~~~~~k~~~~~y~--~~~~~~~p~l~~v~nGId~~~~k~~v------------------------------I--p~G~d~ 528 (700)
.++.+.+...-+. .........+..|+||++.. .+.. + .+....
T Consensus 221 ~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~--~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~ 298 (476)
T cd03791 221 YAREILTPEFGEGLDGLLRARAGKLSGILNGIDYD--VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPL 298 (476)
T ss_pred HHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCc--ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCE
Confidence 7654433210000 00001124688999999842 1110 0 134445
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRY 608 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~ 608 (700)
.+|+|++.+.||++.++++++.+... +.+++++|.|+.+ ..+.++++++++ .++|.|++ ..+.+++..+
T Consensus 299 i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~~---~~~~~~~~~~~~--~~~v~~~~----~~~~~~~~~~ 367 (476)
T cd03791 299 FGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDPE---YEEALRELAARY--PGRVAVLI----GYDEALAHLI 367 (476)
T ss_pred EEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCHH---HHHHHHHHHHhC--CCcEEEEE----eCCHHHHHHH
Confidence 68999999999999999999998764 3678888887543 345666666665 56788776 3344566677
Q ss_pred HHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCC------eEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 609 ICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK------SGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 609 la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~------~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
++. +|++++||.+|+||++++|||+||+|||+|++||+.|+|.++. +|++++++|+++++++|.++++.+ .+
T Consensus 368 ~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~-~~ 445 (476)
T cd03791 368 YAG-ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALY-RD 445 (476)
T ss_pred HHh-CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHH-cC
Confidence 776 9999999999999999999999999999999999999999988 999999999999999999987432 46
Q ss_pred HHHHHHHHHHHHH
Q 005365 683 PSYWDKISLGGLK 695 (700)
Q Consensus 683 p~~~~~ms~~ar~ 695 (700)
++.|.+|++++.+
T Consensus 446 ~~~~~~~~~~~~~ 458 (476)
T cd03791 446 PEAWRKLQRNAMA 458 (476)
T ss_pred HHHHHHHHHHHhc
Confidence 8999999998865
No 16
>PLN02316 synthase/transferase
Probab=100.00 E-value=7.5e-33 Score=327.13 Aligned_cols=358 Identities=14% Similarity=0.050 Sum_probs=241.4
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCC-CCccce-eE
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT-TCGQRL-EK 353 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~-~~~~~~-e~ 353 (700)
+|||++||.+..|- ..+||...++. .|+++|+++||+|. |+|+.++..... ...... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 59999999998864 35799999999 66666799999999 999986531100 000000 00
Q ss_pred e-----------cCccceEEEEecCCCcccccccccccccch------hhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc
Q 005365 354 V-----------YGTKYSDILRVPFRTEKGVVRKWISRFEVW------PYLETYTEDVAVEIAKELQGKPDLIIGNYSDG 416 (700)
Q Consensus 354 i-----------~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~------~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~ 416 (700)
+ ...+++.++.+.... + +..+..++ ..+..|...++..+. ....+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~-~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLL-QSGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHH-hcCCCCCEEEECCChH
Confidence 0 011245555554321 1 11111122 223334444444443 3355899999999999
Q ss_pred hHHHHHHHHh------cCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhh
Q 005365 417 NIVASLLAHK------LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT 490 (700)
Q Consensus 417 ~lva~lla~~------~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~ 490 (700)
++++.++++. .++|+|+|+|++.... ++ -..++..||.|+|+|+..+..+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 9988888764 3589999999864211 00 1245788999999998876544331
Q ss_pred hccccccccccCCCeEEeecCCCCC--CCc---cee------------------------cC-CCCccccccCCchhhhc
Q 005365 491 VGQYESHTAFTLPGLYRVVHGIDVF--DPK---FNI------------------------VS-PGADMSIYFPYTEEKRR 540 (700)
Q Consensus 491 ~~~y~~~~~~~~p~l~~v~nGId~~--~~k---~~v------------------------Ip-~G~d~~~F~g~~~~~Kg 540 (700)
.. . ......+..|+||||.. .+. +-. ++ .......|+||+.++||
T Consensus 780 ~~-l----~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKG 854 (1036)
T PLN02316 780 SA-I----APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKG 854 (1036)
T ss_pred cC-c----ccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccC
Confidence 10 0 00113578999999852 111 000 11 12335678999999999
Q ss_pred hhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC--CCcEEEeccccCcCChhHHHHHHHccCcEEEe
Q 005365 541 LKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL--NGQFRWISSQMNRVRNGELYRYICDTKGAFVQ 618 (700)
Q Consensus 541 l~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L--~~~V~flG~~~d~v~~~el~~~la~~aDvfV~ 618 (700)
++.+++|+..++.. +.+++|+|.|. +..+.+.+.++++++++ +++|.|.|..+ ......+|+. +|+||+
T Consensus 855 vdlLi~Al~~ll~~--~~qlVIvG~Gp--d~~~e~~l~~La~~Lg~~~~~rV~f~g~~d----e~lah~iyaa-ADiflm 925 (1036)
T PLN02316 855 IHLIKHAIWRTLER--NGQVVLLGSAP--DPRIQNDFVNLANQLHSSHHDRARLCLTYD----EPLSHLIYAG-ADFILV 925 (1036)
T ss_pred HHHHHHHHHHHhhc--CcEEEEEeCCC--CHHHHHHHHHHHHHhCccCCCeEEEEecCC----HHHHHHHHHh-CcEEEe
Confidence 99999999998753 57788888762 22345778888888876 67899998432 2222367775 999999
Q ss_pred CCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC-------------CeEEEECCCCHHHHHHHHHHHHHhccCCHHH
Q 005365 619 PALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG-------------KSGYHIDPYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 619 PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg-------------~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
||++|+||++++|||+||+|+|++++||++|+|.++ .+||++++.|+++++++|.+++... ++.
T Consensus 926 PS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~---~~~ 1002 (1036)
T PLN02316 926 PSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAW---YDG 1002 (1036)
T ss_pred CCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhh---hhh
Confidence 999999999999999999999999999999999884 6999999999999999999998422 233
Q ss_pred HHHHHHHHHHHH
Q 005365 686 WDKISLGGLKRI 697 (700)
Q Consensus 686 ~~~ms~~ar~ra 697 (700)
...+++.+++.+
T Consensus 1003 ~~~~~~~~r~~m 1014 (1036)
T PLN02316 1003 RDWFNSLCKRVM 1014 (1036)
T ss_pred HHHHHHHHHHHH
Confidence 333444444443
No 17
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=5e-33 Score=313.79 Aligned_cols=347 Identities=16% Similarity=0.195 Sum_probs=236.1
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
.++|||+++. +..|. +..||.+.++. +++++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~~~-------~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSPF-------SYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCcCC-------cccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 4568999997 32221 45699999999 66777799999999 998653211 01
Q ss_pred ecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc-hHHHHHHHHhcCCcEE
Q 005365 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQC 432 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~-~lva~lla~~~giP~V 432 (700)
.. ++.++++..... +. ..+... .+ .+...+.+.+.+. +||+||+|.... .+.+..+++..++|+|
T Consensus 107 ~~---g~~v~~~~~~~~-~~----~~~~~~-~~--~~~~~l~~~i~~~---kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 FH---GAKVIGSWSFPC-PF----YQKVPL-SL--ALSPRIISEVARF---KPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred cc---CceeeccCCcCC-cc----CCCcee-ec--cCCHHHHHHHHhC---CCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 11 234433322111 00 000000 00 0111334444444 899999987543 3456667788899999
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
++.|+............| . +... +..++..++.+|.|+++|....+.+.+... .....+.+++||+
T Consensus 173 ~~~h~~~~~~~~~~~~~~--~---~~~~--~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~-------~~~~kv~vi~nGv 238 (465)
T PLN02871 173 MSYHTHVPVYIPRYTFSW--L---VKPM--WDIIRFLHRAADLTLVTSPALGKELEAAGV-------TAANRIRVWNKGV 238 (465)
T ss_pred EEEecCchhhhhcccchh--h---HHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHcCC-------CCcCeEEEeCCcc
Confidence 999976432211111111 0 0111 112456788999999999776654433210 1123467788999
Q ss_pred CCC--CCcce---------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHH
Q 005365 513 DVF--DPKFN---------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLI 581 (700)
Q Consensus 513 d~~--~~k~~---------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li 581 (700)
|.. .+... ..++.....+|.|++.+.||++.++++++.+ ++..++++|.| ++ .+++++++
T Consensus 239 d~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~----~~~~l~ivG~G--~~---~~~l~~~~ 309 (465)
T PLN02871 239 DSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL----PGARLAFVGDG--PY---REELEKMF 309 (465)
T ss_pred CccccCCccccHHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhC----CCcEEEEEeCC--hH---HHHHHHHh
Confidence 842 11100 0122334578999999999999999888765 36677777755 32 34555555
Q ss_pred HHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc---CCeEE
Q 005365 582 DQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN---GKSGY 658 (700)
Q Consensus 582 ~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d---g~~G~ 658 (700)
+. .+|.|+| .++.+++..+|+. +|+||+||..|+||++++||||||+|||+|+.||..|++++ +.+|+
T Consensus 310 ~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~ 380 (465)
T PLN02871 310 AG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGF 380 (465)
T ss_pred cc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceE
Confidence 43 4699999 5566899999997 99999999999999999999999999999999999999999 99999
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 659 HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 659 lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++|+++++++|.+++ +|++.+++|+++|++++++
T Consensus 381 lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~ 417 (465)
T PLN02871 381 LYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEVEK 417 (465)
T ss_pred EeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998 8999999999999998753
No 18
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.1e-32 Score=299.21 Aligned_cols=340 Identities=20% Similarity=0.250 Sum_probs=236.3
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||++++. |..||.++++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 79999973 33599999999 67777799999999 99865332110 00
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHh----cCCcEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK----LGVTQC 432 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~----~giP~V 432 (700)
.+++.+..++.... +. .....+.......+.+.+.+. +||+||+|++.....+..++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~l~~~i~~~---~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-PL-------FQYPPYDLALASKIAEVAKRY---KLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-ch-------hhcchhHHHHHHHHHHHHhcC---CccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333332211 00 001112222233444444443 8999999986554433333332 379999
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
++.|+........ ...+. ..++.+++.+|.|++.|....+.+.+.+. ....+.+++||+
T Consensus 116 ~~~h~~~~~~~~~--------~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~--------~~~~i~vi~n~~ 174 (371)
T cd04962 116 TTLHGTDITLVGQ--------DPSFQ-----PATRFSIEKSDGVTAVSESLRQETYELFD--------ITKEIEVIPNFV 174 (371)
T ss_pred EEEcCCccccccc--------cccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHhcC--------CcCCEEEecCCc
Confidence 9999753321110 01111 12456788999999999877654443321 112366788888
Q ss_pred CCCC--Ccc--e-----ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHH
Q 005365 513 DVFD--PKF--N-----IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQ 583 (700)
Q Consensus 513 d~~~--~k~--~-----vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~ 583 (700)
+... +.. . -.+++....+|+|+..+.||++.+++++..+... .+..++++|.|.. .+.+++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~-~~~~l~i~G~g~~-----~~~~~~~~~~ 248 (371)
T cd04962 175 DEDRFRPKPDEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKVRKE-VPARLLLVGDGPE-----RSPAERLARE 248 (371)
T ss_pred CHhhcCCCchHHHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHHHHhc-CCceEEEEcCCcC-----HHHHHHHHHH
Confidence 7321 100 0 0122333467899999999999999999988755 3467777776633 2457778888
Q ss_pred cCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCC
Q 005365 584 YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 663 (700)
Q Consensus 584 l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~ 663 (700)
+++.++|.|+|.+ +++..+++. +|++|+||..|+||++++|||+||+|||+|+.||.+|++.++.+|++++++
T Consensus 249 ~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~ 321 (371)
T cd04962 249 LGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVG 321 (371)
T ss_pred cCCCceEEEecCc------ccHHHHHHh-cCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCC
Confidence 9999999999953 357888886 999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 664 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 664 D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+++++++|..++ +||+.+.+|+++|++.+.+
T Consensus 322 ~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 353 (371)
T cd04962 322 DVEAMAEYALSLL----EDDELWQEFSRAARNRAAE 353 (371)
T ss_pred CHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 9999999999998 8999999999999998654
No 19
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=1.2e-32 Score=301.59 Aligned_cols=350 Identities=19% Similarity=0.269 Sum_probs=244.3
Q ss_pred eEEEEEccccccccCCcCCCCC-cCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEec
Q 005365 277 FNVVILTPHGYFAQDDVLGYPD-TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~-~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~ 355 (700)
|||++++..+. |+ .||.++++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987654 33 499999999 666666777 7888 77643211 0
Q ss_pred CccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEe
Q 005365 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIA 435 (700)
Q Consensus 356 ~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~ 435 (700)
..+++.+.+.+..... ......+..+..++. ......+||+||+|.+..++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1124666665432210 011112222222221 1111236999999998887777777778899999999
Q ss_pred cCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCC
Q 005365 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (700)
Q Consensus 436 H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~ 515 (700)
|+.......... .....+.+..+ .++.+++.+|.|+++|+...+.+.+.+.. +....+.+++||++..
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~------~~~~~i~vi~ng~~~~ 181 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPD------LDPEKVHVIYNGIDTK 181 (388)
T ss_pred eccccccccccc----ccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCC------CCcceEEEecCCCChh
Confidence 987543211000 01111223333 36778999999999998776655443311 1223467889999742
Q ss_pred CCccee-----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc
Q 005365 516 DPKFNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY 584 (700)
Q Consensus 516 ~~k~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l 584 (700)
.+.. ++++....+|.|++.+.||++.++++++.+. ++..++++|+|... .+..+++++.+.++
T Consensus 182 --~~~~~~~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~---~~~~l~i~g~g~~~-~~~~~~~~~~~~~~ 255 (388)
T TIGR02149 182 --EYKPDDGNVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDAVHYIP---KDVQVVLCAGAPDT-PEVAEEVRQAVALL 255 (388)
T ss_pred --hcCCCchHHHHHHhCCCCCceEEEEEcccccccCHHHHHHHHHHHh---hcCcEEEEeCCCCc-HHHHHHHHHHHHHh
Confidence 1110 1233346789999999999999999999874 35567776654322 13446677777777
Q ss_pred CC-CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCC
Q 005365 585 KL-NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 663 (700)
Q Consensus 585 ~L-~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~ 663 (700)
+. .++|.|++. .++.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|+++++.+|++++++
T Consensus 256 ~~~~~~v~~~~~---~~~~~~~~~~~~~-aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~ 331 (388)
T TIGR02149 256 DRNRTGIIWINK---MLPKEELVELLSN-AEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPD 331 (388)
T ss_pred ccccCceEEecC---CCCHHHHHHHHHh-CCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCC
Confidence 65 345887652 5667999999997 999999999999999999999999999999999999999999999999999
Q ss_pred CH------HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 664 HG------EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 664 D~------eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+ ++++++|.+++ +|++.+++|+++|++++.+
T Consensus 332 ~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~ 369 (388)
T TIGR02149 332 NSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRAEE 369 (388)
T ss_pred CCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 98 99999999988 8999999999999998764
No 20
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=2.2e-32 Score=309.44 Aligned_cols=385 Identities=15% Similarity=0.154 Sum_probs=250.6
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCC--Ccc--
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT--CGQ-- 349 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~--~~~-- 349 (700)
|| |||+++|....|- ..+||..=.+- .|.++|+++||+|. |+++.++.-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 66 9999999988864 57899887777 55666799999999 9998765432110 000
Q ss_pred ceeEe--cCccceEEEEec---CC--Ccccc-c--ccccccccch-------------hhHHHHHHHHHHHHHHHcCCCC
Q 005365 350 RLEKV--YGTKYSDILRVP---FR--TEKGV-V--RKWISRFEVW-------------PYLETYTEDVAVEIAKELQGKP 406 (700)
Q Consensus 350 ~~e~i--~~~~~v~I~rvp---~~--~~~~~-~--~~~lsr~~i~-------------~~l~~f~~~~~~~l~~~~~~~p 406 (700)
....+ .......+.++- .. ...-+ + ..+..|..++ ..+..|...++..+. ....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~-~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQ-RLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 00011 000011222110 00 00000 0 0111222222 112223333444443 334589
Q ss_pred eEEEEcCCCchHHHHHHHHhc-------CCcEEEEecCCccccCCCCc-----hhhhhcccccchhhhhhHHHHHHhhCC
Q 005365 407 DLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYPDSD-----IYWKNLDDKYHFSCQFTADLIAMNHTD 474 (700)
Q Consensus 407 DlIh~h~~~~~lva~lla~~~-------giP~V~t~H~l~~~~~~~~~-----~~w~~~~~~y~~~~~~~~E~~al~~AD 474 (700)
||||+|.|.+++++.+++++. ++|+|+|+|++......... ..+............+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999998887654 79999999997543211100 001100000000011233566899999
Q ss_pred EEEecCHHHHHhhhhh-hccccccccc--cCCCeEEeecCCCCCCCcceec-----------------------------
Q 005365 475 FIITSTFQEIAGSKDT-VGQYESHTAF--TLPGLYRVVHGIDVFDPKFNIV----------------------------- 522 (700)
Q Consensus 475 ~IIt~S~~~~~~~k~~-~~~y~~~~~~--~~p~l~~v~nGId~~~~k~~vI----------------------------- 522 (700)
.|+|+|+..++.+++. ...|.-.... .-..+..|+||||.. .++..
T Consensus 223 ~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~--~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lg 300 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTR--QWNPSTDKLIKKRYSIERLDGKLENKKALLEEVG 300 (489)
T ss_pred cceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCcccc--ccCCcccccccccCCcchhhhHHHHHHHHHHHhC
Confidence 9999998877654431 0001100000 023578899999842 11100
Q ss_pred ---CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCc
Q 005365 523 ---SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 599 (700)
Q Consensus 523 ---p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~ 599 (700)
.++.....|+|++.+.||++.+++|+..+... +..++++|.|+.. +.+.++++++++ +++|.|+| .
T Consensus 301 l~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~~~lvivG~G~~~---~~~~l~~l~~~~--~~~V~~~g----~ 369 (489)
T PRK14098 301 LPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--DIQLVICGSGDKE---YEKRFQDFAEEH--PEQVSVQT----E 369 (489)
T ss_pred CCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--CcEEEEEeCCCHH---HHHHHHHHHHHC--CCCEEEEE----e
Confidence 11233567899999999999999999998753 6788888887643 346777888776 47899999 5
Q ss_pred CChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc----CCeEEEECCCCHHHHHHHHHHH
Q 005365 600 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN----GKSGYHIDPYHGEQAAEILVDF 675 (700)
Q Consensus 600 v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d----g~~G~lv~p~D~eaLAeaI~~l 675 (700)
++.+++..+++. +|+||+||.+|+||++.+|||+||+|+|++++||..|+|.+ +.+|++++++|+++++++|.++
T Consensus 370 ~~~~~~~~~~a~-aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~ 448 (489)
T PRK14098 370 FTDAFFHLAIAG-LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEA 448 (489)
T ss_pred cCHHHHHHHHHh-CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHH
Confidence 556788888986 99999999999999999999999999999999999999864 6799999999999999999987
Q ss_pred HHhccCCHHHHHHHHHHHH
Q 005365 676 FEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 676 l~~~~~dp~~~~~ms~~ar 694 (700)
++ +..|++.|+++++++.
T Consensus 449 l~-~~~~~~~~~~~~~~~~ 466 (489)
T PRK14098 449 LA-LYHDEERWEELVLEAM 466 (489)
T ss_pred HH-HHcCHHHHHHHHHHHh
Confidence 63 2378999999988764
No 21
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=2.9e-32 Score=299.11 Aligned_cols=361 Identities=19% Similarity=0.214 Sum_probs=241.7
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+... +. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~---~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPSH---CF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCchh---cc--hhccCC
Confidence 79999976532 489999999 66677799999999 9986432110 00 011111
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHH--HHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIA--KELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI 434 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~--~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t 434 (700)
.-.+++.+.+... .. .++. . .+..+.......+. .....++|+||+|....+... +....+.|++++
T Consensus 53 ~~~i~~~~~~~~~--~~----~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 TLPVRVRGDWLPR--SI----FGRF--H-ILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred eeEEEEEeEEEcc--hh----hHhH--H-HHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 0012222221110 00 0000 0 11111111111111 112348999999875544332 222334899999
Q ss_pred ecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC
Q 005365 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (700)
Q Consensus 435 ~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~ 514 (700)
.|........... .++ ..++.. ....|+.+++.+|.|+++|...++.+.+.++... .....+++||++.
T Consensus 122 ~h~~~~~~~~~~~-~~~---~~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~------~~~~~vi~n~vd~ 190 (392)
T cd03805 122 CHFPDQLLAQRGS-LLK---RLYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTFPSLA------KNPREVVYPCVDT 190 (392)
T ss_pred EecChHHhcCCCc-HHH---HHHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHhcccc------cCCcceeCCCcCH
Confidence 9943221100000 111 111111 1123778899999999999877665544433211 1112467888873
Q ss_pred CCCcce-----------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcC---CCccEEEEecCChh---hHHHHHHH
Q 005365 515 FDPKFN-----------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSD---VENKEHLKESKDLE---EQAEMKKM 577 (700)
Q Consensus 515 ~~~k~~-----------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~---~~~~l~i~g~Gd~e---e~~~~~~l 577 (700)
..+. ..++.....+|.|+..+.||++.++++++.+.... ++..++++|.|+.. +..+.+++
T Consensus 191 --~~~~~~~~~~~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l 268 (392)
T cd03805 191 --DSFESTSEDPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEEL 268 (392)
T ss_pred --HHcCcccccccccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHH
Confidence 2221 12334445678899999999999999999998775 67888888877532 23456788
Q ss_pred HHHHHH-cCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCe
Q 005365 578 YSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKS 656 (700)
Q Consensus 578 ~~li~~-l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~ 656 (700)
++++++ +++.++|.|+| .++.+++..+++. +|++++||..|+||++++|||+||+|||+|+.||..|++.++.+
T Consensus 269 ~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~ 343 (392)
T cd03805 269 QRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGET 343 (392)
T ss_pred HHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCc
Confidence 899999 99999999999 5667899999996 99999999999999999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 657 GYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 657 G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+++++ |+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 344 g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 344 GFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred eEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 999986 9999999999998 8999999999999998865
No 22
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1e-31 Score=296.60 Aligned_cols=332 Identities=15% Similarity=0.219 Sum_probs=223.1
Q ss_pred HHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHH---
Q 005365 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTE--- 392 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~--- 392 (700)
+|+++|+++||+|+ ++|....... .+ ++++++++...... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888899999999 9987643211 11 47788777553211 122233322211
Q ss_pred ---HHHHHHHH--HcCCCCeEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCccccCCCC----chhhhhcccccchhhh
Q 005365 393 ---DVAVEIAK--ELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDS----DIYWKNLDDKYHFSCQ 462 (700)
Q Consensus 393 ---~~~~~l~~--~~~~~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H~l~~~~~~~~----~~~w~~~~~~y~~~~~ 462 (700)
.+.+.+.. ..+.+|||||+|...+. +..+.+. .++|+|...|.+........ ...... ....+...+
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSL-DDALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCch-hHHHHHHHh
Confidence 12222222 22448999999975432 2334444 35888876653322111000 000000 000111111
Q ss_pred hhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-------------cCCCCccc
Q 005365 463 FTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-------------VSPGADMS 529 (700)
Q Consensus 463 ~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-------------Ip~G~d~~ 529 (700)
.......++.+|.||++|...++.+.+.+. ..+.+|+||++. ..+.. ++++....
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~----------~ki~vI~ngvd~--~~f~~~~~~~~~~~~~~~~~~~~~~i 214 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPAELR----------SRISVIHDGIDT--DRLRPDPQARLRLPNGRVLTPGDEVI 214 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcHhhc----------cceEEeCCCccc--cccCCCchhhhcccccccCCCCCeEE
Confidence 111345789999999999877654333221 246788999984 22211 12233457
Q ss_pred cccCC-chhhhchhhHHHHHHHHhhcCCCccEEEEecCChh------hH-HHHHHHHHHHHHcC---CCCcEEEeccccC
Q 005365 530 IYFPY-TEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLE------EQ-AEMKKMYSLIDQYK---LNGQFRWISSQMN 598 (700)
Q Consensus 530 ~F~g~-~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~e------e~-~~~~~l~~li~~l~---L~~~V~flG~~~d 598 (700)
+|.|+ +.+.||++.+++|+..+....++..++++|.+... .. .+.+. ++++++ ..++|.|+|
T Consensus 215 ~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~V~f~G---- 287 (396)
T cd03818 215 TFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQH---MLDELGGRLDLSRVHFLG---- 287 (396)
T ss_pred EEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHH---HHHHhhcccCcceEEEeC----
Confidence 78997 89999999999999999887788888888864210 00 12222 233333 247899999
Q ss_pred cCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHh
Q 005365 599 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 599 ~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~ 678 (700)
.++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||..|++.++.+|++++++|++++|++|.+++
T Consensus 288 ~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll-- 364 (396)
T cd03818 288 RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELL-- 364 (396)
T ss_pred CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHH--
Confidence 6667899999996 9999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCHHHHHHHHHHHHHHHHh
Q 005365 679 CKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 679 ~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|++.+.+|+++|++++.+
T Consensus 365 --~~~~~~~~l~~~ar~~~~~ 383 (396)
T cd03818 365 --DDPARRARLRRAARRTALR 383 (396)
T ss_pred --hCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999875
No 23
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2.1e-31 Score=301.10 Aligned_cols=387 Identities=16% Similarity=0.150 Sum_probs=241.4
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCc-cceeEe
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-QRLEKV 354 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~-~~~e~i 354 (700)
.|||+++|....|- ..+||..-.+- .|.++|+++||+|. |+++.+..-...... .....+
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~~~~~~~~~~~ 63 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAGIEDAEQVHSF 63 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhhhcCceEEEEE
Confidence 48999999988764 57899887777 55667799999999 999876443110000 001111
Q ss_pred cC--ccceEEEEecCCCccc-cc--cccccccc-ch------h------hHHHHHHHHHHHHHHH-cCCCCeEEEEcCCC
Q 005365 355 YG--TKYSDILRVPFRTEKG-VV--RKWISRFE-VW------P------YLETYTEDVAVEIAKE-LQGKPDLIIGNYSD 415 (700)
Q Consensus 355 ~~--~~~v~I~rvp~~~~~~-~~--~~~lsr~~-i~------~------~l~~f~~~~~~~l~~~-~~~~pDlIh~h~~~ 415 (700)
.. ...+++......+-.- ++ ..+..|.. ++ + .+..|...++..+... ...+|||||+|.|.
T Consensus 64 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~ 143 (485)
T PRK14099 64 PDLFGGPARLLAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQ 143 (485)
T ss_pred eeeCCceEEEEEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcH
Confidence 10 0011222111110000 00 01111111 11 1 1122333333322221 13589999999999
Q ss_pred chHHHHHHHH--hcCCcEEEEecCCccccCCCC------chhhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHHHh
Q 005365 416 GNIVASLLAH--KLGVTQCTIAHALEKTKYPDS------DIYWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIAG 486 (700)
Q Consensus 416 ~~lva~lla~--~~giP~V~t~H~l~~~~~~~~------~~~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~ 486 (700)
+++++.++.. ..++|+|+|+|++........ +..+..+. ....+.......+.+++.||.|+|+|+..++.
T Consensus 144 ~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~e 223 (485)
T PRK14099 144 AGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALE 223 (485)
T ss_pred HHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHH
Confidence 9998877753 246899999999854321110 00111100 00000011112556789999999999877665
Q ss_pred hhhhhccccc--cccccCCCeEEeecCCCCC--CCcce-e-------------------------cC--CCCccccccCC
Q 005365 487 SKDTVGQYES--HTAFTLPGLYRVVHGIDVF--DPKFN-I-------------------------VS--PGADMSIYFPY 534 (700)
Q Consensus 487 ~k~~~~~y~~--~~~~~~p~l~~v~nGId~~--~~k~~-v-------------------------Ip--~G~d~~~F~g~ 534 (700)
+++...-+.- ........+..|+||||.. .+... . ++ +......|+||
T Consensus 224 i~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgR 303 (485)
T PRK14099 224 IQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISR 303 (485)
T ss_pred HhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEec
Confidence 4432110000 0001123578899999842 11100 0 11 12234457899
Q ss_pred chhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcE-EEeccccCcCChhHHHHHHHccC
Q 005365 535 TEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQF-RWISSQMNRVRNGELYRYICDTK 613 (700)
Q Consensus 535 ~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V-~flG~~~d~v~~~el~~~la~~a 613 (700)
+.++||++.+++|+..+... +..++++|.|+.+ ..+.+++++++++ +++ .|+|+ .+++..+|..++
T Consensus 304 L~~~KG~d~Li~A~~~l~~~--~~~lvivG~G~~~---~~~~l~~l~~~~~--~~v~~~~G~------~~~l~~~~~a~a 370 (485)
T PRK14099 304 LSWQKGLDLLLEALPTLLGE--GAQLALLGSGDAE---LEARFRAAAQAYP--GQIGVVIGY------DEALAHLIQAGA 370 (485)
T ss_pred CCccccHHHHHHHHHHHHhc--CcEEEEEecCCHH---HHHHHHHHHHHCC--CCEEEEeCC------CHHHHHHHHhcC
Confidence 99999999999999988753 5788888888653 3356677777664 455 78884 367888775349
Q ss_pred cEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC---------CeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 005365 614 GAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHIDPYHGEQAAEILVDFFEKCKADPS 684 (700)
Q Consensus 614 DvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg---------~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~ 684 (700)
|+||+||++|+||++++|||+||+|+|+|++||++|+|.++ .+|++++|+|+++++++|.+++. +.+|++
T Consensus 371 Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~-l~~d~~ 449 (485)
T PRK14099 371 DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAA-LFADPV 449 (485)
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHH-HhcCHH
Confidence 99999999999999999999999999999999999999876 68999999999999999997431 127999
Q ss_pred HHHHHHHHHHH
Q 005365 685 YWDKISLGGLK 695 (700)
Q Consensus 685 ~~~~ms~~ar~ 695 (700)
.|++|+++|++
T Consensus 450 ~~~~l~~~~~~ 460 (485)
T PRK14099 450 AWRRLQRNGMT 460 (485)
T ss_pred HHHHHHHHhhh
Confidence 99999999863
No 24
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1.8e-31 Score=289.32 Aligned_cols=264 Identities=19% Similarity=0.240 Sum_probs=207.0
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
+||+||+|....+..+..++++.|+|++++.|+........ +.... .+... ...++..++.+|.|+++|...+
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~----~~~~~-~~~~~--~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLA----LLLRS-RWALY--ARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccch----hhccc-chhHH--HHHHHHHHHhcCEEEECCHHHH
Confidence 89999999877778888888999999999999754322111 10000 01111 1235567899999999997665
Q ss_pred HhhhhhhccccccccccCCCeEEeecCCCCCCCccee--cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEE
Q 005365 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI--VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v--Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i 562 (700)
+.+.+. .+....+.+++||++. .++.. ........+|.|+..+.||.+.+++++..+....++..+++
T Consensus 155 ~~~~~~--------~~~~~~i~vi~~g~d~--~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i 224 (367)
T cd05844 155 DRLLAL--------GFPPEKVHVHPIGVDT--AKFTPATPARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVI 224 (367)
T ss_pred HHHHHc--------CCCHHHeEEecCCCCH--HhcCCCCCCCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEE
Confidence 433321 1222346778889873 22221 11223356789999999999999999999987777788888
Q ss_pred EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC------CCCccHHHHHHHHcC
Q 005365 563 KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCG 636 (700)
Q Consensus 563 ~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~------~E~fGl~vlEAMA~G 636 (700)
+|.|+ +.++++++++++++.++|+|+| .++.+++..+++. +|++|+||. .|+||++++|||+||
T Consensus 225 vG~g~-----~~~~~~~~~~~~~~~~~v~~~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G 294 (367)
T cd05844 225 IGDGP-----LLAALEALARALGLGGRVTFLG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASG 294 (367)
T ss_pred EeCch-----HHHHHHHHHHHcCCCCeEEECC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcC
Confidence 87652 3356788889999999999999 5667899999997 999999997 599999999999999
Q ss_pred CCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 637 LPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 637 lPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.+|+.+|++++.+
T Consensus 295 ~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~ 353 (367)
T cd05844 295 VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLL----ADPDLRARMGAAGRRRVEE 353 (367)
T ss_pred CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998 8999999999999998864
No 25
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=3e-31 Score=285.74 Aligned_cols=327 Identities=17% Similarity=0.173 Sum_probs=241.7
Q ss_pred CcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccc
Q 005365 298 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKW 377 (700)
Q Consensus 298 ~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~ 377 (700)
..||.++++. +|+++|+++||+|. |+|...+.. ...+ ..++.+++++......
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~~----~~~~~~~~~~~~~~~~----- 60 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AELE----AEGSRHIKLPFISKNP----- 60 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHHH----hcCCeEEEccccccch-----
Confidence 3499999999 67777799999999 887532111 1111 1135566665543211
Q ss_pred cccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhccccc
Q 005365 378 ISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKY 457 (700)
Q Consensus 378 lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y 457 (700)
+..+ .+...+.+.+.+. +||+||+|.....+.+.++++..++|++++.|+......
T Consensus 61 ------~~~~-~~~~~l~~~~~~~---~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 61 ------LRIL-LNVARLRRLIREE---KVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred ------hhhH-HHHHHHHHHHHHc---CCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 1111 1222334444443 899999998777777888888889999999998643220
Q ss_pred chhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCc-cee-------------cC
Q 005365 458 HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK-FNI-------------VS 523 (700)
Q Consensus 458 ~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k-~~v-------------Ip 523 (700)
.....++.+|.++++|....+.+++.++ +.......++||++..... ... .+
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~~~~~-------~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIRENYG-------VDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLP 182 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHHHhcC-------CChhhEEEecCCccccccCccccchHHHHHHHHHcCCC
Confidence 0123467899999999777654443222 1123467788998742111 000 12
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChh
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNG 603 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~ 603 (700)
+.....+|.|++.+.||++.+++++..+....++..++++|.++... ...+.+.+.++++++.++|.|+|+ .+
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~g~------~~ 255 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRR-FYYAELLELIKRLGLQDRVTFVGH------CS 255 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccc-hHHHHHHHHHHHcCCcceEEEcCC------cc
Confidence 33445778999999999999999999998776678888888876532 344666778888999999999995 35
Q ss_pred HHHHHHHccCcEEEeCC-CCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 604 ELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 604 el~~~la~~aDvfV~PS-~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
++..+++. +|++++|| ..|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|..++. .+
T Consensus 256 ~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~---~~ 331 (355)
T cd03819 256 DMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILS---LL 331 (355)
T ss_pred cHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHh---hC
Confidence 78899996 99999999 899999999999999999999999999999999999999999999999999976652 68
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 005365 683 PSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 683 p~~~~~ms~~ar~ra~e~ 700 (700)
++.+.+++++|++.+.++
T Consensus 332 ~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 332 PEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 26
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=3.1e-31 Score=291.63 Aligned_cols=342 Identities=16% Similarity=0.179 Sum_probs=243.2
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
|+-||++++..-+|.|. ...||+++++. +++++|+. +|+ |+|...+.-. ..|.
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~~- 53 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYTK- 53 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chhh-
Confidence 67899999998888764 34699999999 56656643 999 9998765311 1111
Q ss_pred cCccceEEEEecCCCccc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEE
Q 005365 355 YGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~-~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~ 433 (700)
..+++.++++++....+ ...+|.+- .-. .|...+...+......++||||.|... .+...+..+..+.|++.
T Consensus 54 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 54 -VNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred -ccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 11256777776654321 11222221 112 233334444433323479999998744 34444455556789999
Q ss_pred EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCC
Q 005365 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (700)
Q Consensus 434 t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId 513 (700)
+.|+.+.. ..++.++.||++|...++.+.+.+ ......+++||++
T Consensus 127 ~~h~~~~~--------------------------~~~~~~~~ii~~S~~~~~~~~~~~---------~~~~i~vIpngvd 171 (380)
T PRK15484 127 HMHNAFEP--------------------------ELLDKNAKIIVPSQFLKKFYEERL---------PNADISIVPNGFC 171 (380)
T ss_pred EEecccCh--------------------------hHhccCCEEEEcCHHHHHHHHhhC---------CCCCEEEecCCCC
Confidence 99964210 124468999999977655433321 1224678889998
Q ss_pred CCCCccee-----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCCh----hhHHHHHHHH
Q 005365 514 VFDPKFNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDL----EEQAEMKKMY 578 (700)
Q Consensus 514 ~~~~k~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~----ee~~~~~~l~ 578 (700)
.. .+.. ++++....+|.|++.+.||++.+++|+..+....++..++++|.|.. +...+.++++
T Consensus 172 ~~--~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~ 249 (380)
T PRK15484 172 LE--TYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVL 249 (380)
T ss_pred HH--HcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHH
Confidence 42 1110 12234457789999999999999999999988888888999987643 2234555677
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC-CCccHHHHHHHHcCCCEEEcCCCCcccccccCCeE
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSG 657 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G 657 (700)
+++++++ .+|.|+| .++.+++..+|+. +|++|+||.+ |+||++++||||||+|||+|+.||++|++.++.+|
T Consensus 250 ~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G 322 (380)
T PRK15484 250 EAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITG 322 (380)
T ss_pred HHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCce
Confidence 7776665 5799999 5567899999997 9999999975 99999999999999999999999999999999999
Q ss_pred E-EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 658 Y-HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 658 ~-lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+ +++|.|++++|++|..++ +|++. .+|+++|++.+.+
T Consensus 323 ~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~ 360 (380)
T PRK15484 323 YHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFS 360 (380)
T ss_pred EEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHH
Confidence 9 568899999999999998 88885 7899999988754
No 27
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=3.7e-31 Score=289.10 Aligned_cols=335 Identities=15% Similarity=0.170 Sum_probs=234.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++..+. +.||.+.++. +|++.|.+.|+++. |++....+. ...... .
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~~----~~~~~~----~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVSA----FRKRIQ----R 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCCh----hHHHHH----h
Confidence 677776543 3599999999 56666688999988 776322111 111111 1
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcE-EEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~-V~t~H 436 (700)
.++.+++++..... .+ .+...+.+.+.+. +||+||+|...+ ..+..+++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~~-----------~~----~~~~~l~~~l~~~---~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPGK-----------DV----AVYPQLYRLLRQL---RPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCCC-----------Ch----HHHHHHHHHHHHh---CCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 24667766543210 01 1123345555555 899999987543 34455666777775 45556
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+...... ....|. +.+ .++...+.+|.++++|....+.+.+.++ .....+..++||++.
T Consensus 113 ~~~~~~~--~~~~~~-----~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~~~-------~~~~~~~vi~ngvd~-- 171 (374)
T TIGR03088 113 GRDVFDL--DGSNWK-----YRW-----LRRLYRPLIHHYVAVSRDLEDWLRGPVK-------VPPAKIHQIYNGVDT-- 171 (374)
T ss_pred Ccccccc--hhhHHH-----HHH-----HHHHHHhcCCeEEEeCHHHHHHHHHhcC-------CChhhEEEeccCccc--
Confidence 4322111 011111 111 1334556789999999877665444332 112346789999984
Q ss_pred Cccee-------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCC----CccEEEEecCChhhHHHHHHHHH
Q 005365 517 PKFNI-------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV----ENKEHLKESKDLEEQAEMKKMYS 579 (700)
Q Consensus 517 ~k~~v-------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~----~~~l~i~g~Gd~ee~~~~~~l~~ 579 (700)
..+.. .+......+|.|++.+.||+..+++++..+....+ +..++++|.| +. .+.+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g--~~---~~~~~~ 246 (374)
T TIGR03088 172 ERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDG--PA---RGACEQ 246 (374)
T ss_pred cccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCC--ch---HHHHHH
Confidence 22211 11223356789999999999999999999887654 3456666654 32 356788
Q ss_pred HHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEE
Q 005365 580 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYH 659 (700)
Q Consensus 580 li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~l 659 (700)
.++++++.+++.|+|.+ +++..+++. +|++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|++
T Consensus 247 ~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~ 319 (374)
T TIGR03088 247 MVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGAL 319 (374)
T ss_pred HHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEE
Confidence 88899999999999943 457888886 99999999999999999999999999999999999999999999999
Q ss_pred ECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 660 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 660 v~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++++|++++|++|.+++ +|++.+.+++++|++++.+
T Consensus 320 ~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~ 355 (374)
T TIGR03088 320 VPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQ 355 (374)
T ss_pred eCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 8999999999999998864
No 28
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.5e-30 Score=280.81 Aligned_cols=339 Identities=14% Similarity=0.119 Sum_probs=233.6
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+|++.+++| |..||++.++. +++++|.++||+|+ |+|........ . ...
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~------~---~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK------E---TEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc------c---ccc
Confidence 69999998886 34699999999 67777799999999 99865432210 0 111
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.+++++++|.....+. .. .... ...+.+.+. ...++|+||...... ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~~--------~~--~~~~-~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGGL--------GT--IIYD-ILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccch--------hh--hHHH-HHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 3577887776532110 00 0000 011111111 123566666654444 33444556669999999998
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
..... ..|.... ..+ ....++.+++.+|.|+++|....+.+++.++. +. ..++||++....
T Consensus 118 ~~~~~-----~~~~~~~--~~~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~---------~~-~~i~ngv~~~~~ 178 (363)
T cd04955 118 LEWKR-----AKWGRPA--KRY--LKFGEKLAVKFADRLIADSPGIKEYLKEKYGR---------DS-TYIPYGADHVVS 178 (363)
T ss_pred cceee-----cccccch--hHH--HHHHHHHHHhhccEEEeCCHHHHHHHHHhcCC---------CC-eeeCCCcChhhc
Confidence 74332 1222111 111 12236678899999999997776655443331 22 678899984321
Q ss_pred cc--ee---c-CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHH-HcCCCCcE
Q 005365 518 KF--NI---V-SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLID-QYKLNGQF 590 (700)
Q Consensus 518 k~--~v---I-p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~-~l~L~~~V 590 (700)
.. .. . .......+|+|+..+.||++.+++++..+.. +..++++|.|+... .+.+.++ .+++.++|
T Consensus 179 ~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~---~~~l~ivG~~~~~~-----~~~~~~~~~~~~~~~V 250 (363)
T cd04955 179 SEEDEILKKYGLEPGRYYLLVGRIVPENNIDDLIEAFSKSNS---GKKLVIVGNADHNT-----PYGKLLKEKAAADPRI 250 (363)
T ss_pred chhhhhHHhcCCCCCcEEEEEecccccCCHHHHHHHHHhhcc---CceEEEEcCCCCcc-----hHHHHHHHHhCCCCcE
Confidence 11 00 0 1122356799999999999999999988753 67788888774332 2223333 56788899
Q ss_pred EEeccccCcCChhHHHHHHHccCcEEEeCCCC-CCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHH
Q 005365 591 RWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 669 (700)
Q Consensus 591 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLA 669 (700)
+|+| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+|+.|+..|++.+ +|++++++|+ ++
T Consensus 251 ~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~ 321 (363)
T cd04955 251 IFVG----PIYDQELLELLRY-AALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LA 321 (363)
T ss_pred EEcc----ccChHHHHHHHHh-CCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HH
Confidence 9999 5667899999997 9999999998 9999999999999999999999999999966 7999988776 99
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 670 EILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 670 eaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++|..++ +|++.+.+++++|++++.+
T Consensus 322 ~~i~~l~----~~~~~~~~~~~~~~~~~~~ 347 (363)
T cd04955 322 SLLEELE----ADPEEVSAMAKAARERIRE 347 (363)
T ss_pred HHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 9999998 8999999999999998764
No 29
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.3e-30 Score=277.19 Aligned_cols=339 Identities=17% Similarity=0.194 Sum_probs=238.2
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++.++ |+.||.+.++. +|+++|.++||+|+ |++......... ...
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~--- 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------EER--- 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------hhc---
Confidence 6899987665 44699999999 77777899999999 887653322110 111
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.+..+.+++...... ..+... .....+. ....+||+||.|+..............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~~----------~~~~~~----~~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNVA----------STPFSP----SFFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccccc----------cccccH----HHHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 133455554322100 000000 1111111 2234899999988655433333333368899999996
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
...... .. +.+... .++..++.||.|+++|....+.+..... + . .....++||++....
T Consensus 116 ~~~~~~----~~-------~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~~~~~-~------~-~~~~~i~~gi~~~~~ 174 (357)
T cd03795 116 DIVKQK----LL-------LKLYRP--LQRRFLRRADAIVATSPNYAETSPVLRR-F------R-DKVRVIPLGLDPARY 174 (357)
T ss_pred hhhccc----hh-------hhhhhH--HHHHHHHhcCEEEeCcHHHHHHHHHhcC-C------c-cceEEecCCCChhhc
Confidence 422110 00 111111 2456789999999999776543332221 1 1 346778899984211
Q ss_pred cce--------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 518 KFN--------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 518 k~~--------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
... ..+......+|.|+..+.||++.+++++.++. +..++++|.|+. ...+.+.++++++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~----~~~l~i~G~g~~-----~~~~~~~~~~~~~~~~ 245 (357)
T cd03795 175 PRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP----DAPLVIVGEGPL-----EAELEALAAALGLLDR 245 (357)
T ss_pred CCcchhhhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhcc----CcEEEEEeCChh-----HHHHHHHHHhcCCcce
Confidence 110 12334456789999999999999999999875 677888887632 3567778888899999
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc-CCeEEEECCCCHH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN-GKSGYHIDPYHGE 666 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d-g~~G~lv~p~D~e 666 (700)
|.|+| .++.+++..+++. ||++++||. .|+||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|++
T Consensus 246 V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~ 320 (357)
T cd03795 246 VRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPA 320 (357)
T ss_pred EEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHH
Confidence 99999 6667899999996 999999996 59999999999999999999999999999986 8999999999999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
+++++|.+++ +|++.+++|+++|++++.++
T Consensus 321 ~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~ 350 (357)
T cd03795 321 ALAEAIRRLL----EDPELRERLGEAARERAEEE 350 (357)
T ss_pred HHHHHHHHHH----HCHHHHHHHHHHHHHHHHHh
Confidence 9999999998 89999999999999998763
No 30
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.98 E-value=7.8e-30 Score=284.08 Aligned_cols=361 Identities=13% Similarity=0.069 Sum_probs=237.2
Q ss_pred CCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcc-----
Q 005365 297 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEK----- 371 (700)
Q Consensus 297 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~----- 371 (700)
-..||.++.+..+|-++.+...+.=+-.|+.|..+|-++|++.....+.++-...-.-...++..+-+++..-+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (578)
T PRK15490 171 LGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIE 250 (578)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcccc
Confidence 346999999998887665554444444577787788899998766655544211111122233444444421111
Q ss_pred -cccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEE-ecCCccccCCCCchh
Q 005365 372 -GVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI-AHALEKTKYPDSDIY 449 (700)
Q Consensus 372 -~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t-~H~l~~~~~~~~~~~ 449 (700)
+.++.+++. +.|..-.-...+...+++. +||+||+|...+++.+.++++..|+|++++ .|+..... ...
T Consensus 251 ~~~~~~~~~~--~~~~~~~~~~~l~~~ir~~---rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~----~~r 321 (578)
T PRK15490 251 SPELRLLLSH--LPPVCKYGIKHLVPHLCER---KLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV----RKR 321 (578)
T ss_pred chHHHHHHhc--CChHHHHHHHHHHHHHHHc---CCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc----hhh
Confidence 112222211 1111112223344555555 999999999888888888898899999654 66521111 000
Q ss_pred hhhcccccchhhhhhHHHHHHhhCCE------EEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee--
Q 005365 450 WKNLDDKYHFSCQFTADLIAMNHTDF------IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-- 521 (700)
Q Consensus 450 w~~~~~~y~~~~~~~~E~~al~~AD~------IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-- 521 (700)
+ +..|...+..++. +++.|....+.+.+.++ +....+.+|+||++.. .+..
T Consensus 322 ~------------~~~e~~~~~~a~~i~~~sd~v~~s~~v~~~l~~~lg-------ip~~KI~VIyNGVD~~--rf~p~~ 380 (578)
T PRK15490 322 L------------FKPEYEPLYQALAVVPGVDFMSNNHCVTRHYADWLK-------LEAKHFQVVYNGVLPP--STEPSS 380 (578)
T ss_pred H------------HHHHHHHhhhhceeEecchhhhccHHHHHHHHHHhC-------CCHHHEEEEeCCcchh--hcCccc
Confidence 0 0011122333333 44455333332222222 2223478899999842 1111
Q ss_pred -------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCC
Q 005365 522 -------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNG 588 (700)
Q Consensus 522 -------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~ 588 (700)
+++......+++++.+.|+...+++++..+....++..++++|.| ++.++++++++++++.+
T Consensus 381 ~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG-----~~~eeLk~la~elgL~d 455 (578)
T PRK15490 381 EVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDG-----DLRAEAQKRAEQLGILE 455 (578)
T ss_pred hhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCc-----hhHHHHHHHHHHcCCCC
Confidence 122223455788999999999999999988877777778888765 23467888999999999
Q ss_pred cEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHH
Q 005365 589 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQA 668 (700)
Q Consensus 589 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaL 668 (700)
+|+|+|++ +++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||.+|+|.+|.+|++++++|++++
T Consensus 456 ~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aL 528 (578)
T PRK15490 456 RILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNL 528 (578)
T ss_pred cEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhH
Confidence 99999953 467888886 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 669 AEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 669 AeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
++++..+. ++..+...+..|+++|+++++++
T Consensus 529 a~ai~lA~-aL~~ll~~~~~mg~~ARe~V~e~ 559 (578)
T PRK15490 529 DQACRYAE-KLVNLWRSRTGICQQTQSFLQER 559 (578)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 88774321 12245556678999999998753
No 31
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.98 E-value=9.8e-30 Score=273.34 Aligned_cols=256 Identities=20% Similarity=0.258 Sum_probs=203.3
Q ss_pred CCCeEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 404 ~~pDlIh~h~~~~-~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
.+||+||+|+... ...+.+.++..++|++++.|+......... ..++..++.+|.++++|..
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA-----------------IDLDEKLARADFVVAISEY 140 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch-----------------HHHHHHHhhCCEEEECCHH
Confidence 3899999998644 445555555568999999997532211000 1245678899999999987
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee----cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI----VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v----Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~ 558 (700)
.++.+++.++ .......+++||++. ..+.. ........+|+|+..+.||++.+++++..+....++.
T Consensus 141 ~~~~l~~~~~-------~~~~~~~vi~~~~d~--~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~ 211 (355)
T cd03799 141 NRQQLIRLLG-------CDPDKIHVVHCGVDL--ERFPPRPPPPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDF 211 (355)
T ss_pred HHHHHHHhcC-------CCcccEEEEeCCcCH--HHcCCccccccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCe
Confidence 7765554432 122357788999973 22221 1223335678899999999999999999988776677
Q ss_pred cEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC------CCccHHHHHH
Q 005365 559 KEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEA 632 (700)
Q Consensus 559 ~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~------E~fGl~vlEA 632 (700)
.++++|.++. ...+.+.++++++.++|+|+| .++.+++..+++. +|++++||.. |+||++++||
T Consensus 212 ~l~i~G~~~~-----~~~~~~~~~~~~~~~~v~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea 281 (355)
T cd03799 212 RLDIVGDGPL-----RDELEALIAELGLEDRVTLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEA 281 (355)
T ss_pred EEEEEECCcc-----HHHHHHHHHHcCCCCeEEECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHH
Confidence 8888887743 356778888889999999999 5667899999997 9999999998 9999999999
Q ss_pred HHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 633 MTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 633 MA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+++ +|++.+.+|+++|++++++
T Consensus 282 ~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~ 344 (355)
T cd03799 282 MAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLL----DDPELRREMGEAGRARVEE 344 (355)
T ss_pred HHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 8999999999999998865
No 32
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.97 E-value=1.2e-29 Score=271.42 Aligned_cols=351 Identities=15% Similarity=0.131 Sum_probs=239.5
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++++.+ |..||.+.++. +|++.|+++||+|+ |+|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6889987664 45699999999 67777799999999 887653321100 0000
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCC--CchHHHHHHHHhcCCcEEEEe
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS--DGNIVASLLAHKLGVTQCTIA 435 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~--~~~lva~lla~~~giP~V~t~ 435 (700)
............ ... .... ..+.......+ .....+||+||.|.. .....+...++..++|++++.
T Consensus 52 -~~~~~~~~~~~~--~~~-----~~~~---~~~~~~~~~~~-~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINVA--YGL-----NLAR---YLFPPSLLAWL-RLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccchh--hhh-----hhhh---hccChhHHHHH-HHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 000000000000 000 0000 00001111111 122348999999873 334456666777899999999
Q ss_pred cCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCC
Q 005365 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (700)
Q Consensus 436 H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~ 515 (700)
|+....... ....+. .....+..+...++.++.++++|........... .......++||++..
T Consensus 120 ~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~---------~~~~~~vi~~~~~~~ 183 (375)
T cd03821 120 HGMLDPWAL-PHKALK------KRLAWFLFERRLLQAAAAVHATSEQEAAEIRRLG---------LKAPIAVIPNGVDIP 183 (375)
T ss_pred ccccccccc-ccchhh------hHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhC---------CcccEEEcCCCcChh
Confidence 986433211 011111 1111223356778899999999966654322211 123467788998842
Q ss_pred CCcce---------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC
Q 005365 516 DPKFN---------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 516 ~~k~~---------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L 586 (700)
..... ..++.....+|.|+..+.||++.+++++..+....++..++++|.++... ...++.+++++++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~---~~~~~~~~~~~~~ 260 (375)
T cd03821 184 PFAALPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGY---RAELKQIAAALGL 260 (375)
T ss_pred ccCcchhhhhhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcch---HHHHHHHHHhcCc
Confidence 21111 12344556789999999999999999999998877788899998876543 2445556688899
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHH
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
.++|.|+| .++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.||..|++.+ .+|+++++ +++
T Consensus 261 ~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~ 333 (375)
T cd03821 261 EDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVD 333 (375)
T ss_pred cceEEEcC----CCChHHHHHHHhh-CCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChH
Confidence 99999999 5566899999997 99999999999999999999999999999999999999998 78998876 559
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++|.+++ +|++.+++++++|++.+.+
T Consensus 334 ~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 362 (375)
T cd03821 334 ALAAALRRAL----ELPQRLKAMGENGRALVEE 362 (375)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 9999999998 8999999999999998654
No 33
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.97 E-value=3e-30 Score=278.25 Aligned_cols=335 Identities=14% Similarity=0.125 Sum_probs=236.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++.. ..||.+.++. +++++|++.||+|+ +++...... ....... .
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~~----~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEIE----K 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHHH----H
Confidence 688887543 2499999999 56666688999999 888653221 0111111 1
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcE-EEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~-V~t~H 436 (700)
.++.+++++.... ..+ .+...+.+.+.+ .+||+||+|......++..+++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYKLIKK---NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHHHHhc---CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 1455665543321 111 122223333333 3899999998777667777777777775 55677
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
........... .... ...+...++.+|.++++|....+.+... .....+.+++||++...
T Consensus 113 ~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---------~~~~~~~vi~ngvd~~~ 172 (358)
T cd03812 113 NTSDSHDKKKK--------ILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---------VKNKKFKVIPNGIDLEK 172 (358)
T ss_pred cccccccccch--------hhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---------CCcccEEEEeccCcHHH
Confidence 65433211100 0000 1124567888999999997766543322 12234778899998421
Q ss_pred Ccce----------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC
Q 005365 517 PKFN----------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 517 ~k~~----------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L 586 (700)
.... -...+....+|.|++.+.||++.+++++..+....++..++++|.|+. .+.+++.++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~-----~~~~~~~~~~~~~ 247 (358)
T cd03812 173 FIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGEL-----EEEIKKKVKELGL 247 (358)
T ss_pred cCCCchhhhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCch-----HHHHHHHHHhcCC
Confidence 1110 022344457799999999999999999999988888888888887743 3567778888999
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHH
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
.++|.|+|+ .+++..+++. ||++|+||.+|+||++++||||||+|||+|+.||.+|++.+ ..|++..+++++
T Consensus 248 ~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~ 319 (358)
T cd03812 248 EDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPE 319 (358)
T ss_pred CCcEEEecc------cCCHHHHHHh-cCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHH
Confidence 999999995 3467888886 99999999999999999999999999999999999999998 467777777899
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 667 QAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
++|++|.+++ +||+.+++++..+....
T Consensus 320 ~~a~~i~~l~----~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 320 IWAEEILKLK----SEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHHHHHHHH----hCcchhhhhhhhhhccc
Confidence 9999999998 89999998888776543
No 34
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.97 E-value=5.2e-30 Score=285.15 Aligned_cols=353 Identities=12% Similarity=0.023 Sum_probs=233.5
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
|...||++++... +|.+..+. +++++|+++||+|+ |+|...+... . .
T Consensus 1 ~~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~~----~----~ 47 (415)
T cd03816 1 PKRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPPH----D----E 47 (415)
T ss_pred CCccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCCC----H----H
Confidence 3446888887522 45566667 67778899999999 9986532210 0 0
Q ss_pred ecCccceEEEEecCCC-cccccccccccccchhhHHHHHH---HHHHHHHHHcCCCCeEEEEcCCCc---hHHHHHHHHh
Q 005365 354 VYGTKYSDILRVPFRT-EKGVVRKWISRFEVWPYLETYTE---DVAVEIAKELQGKPDLIIGNYSDG---NIVASLLAHK 426 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~-~~~~~~~~lsr~~i~~~l~~f~~---~~~~~l~~~~~~~pDlIh~h~~~~---~lva~lla~~ 426 (700)
.....++.+++++... ..+. ...+..+...... .+.+.+.. ..+||+||+|.... ...+.++++.
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~ 119 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLL 119 (415)
T ss_pred HhcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 0112357777776653 1110 0111112211111 12222222 23799999976433 3456666777
Q ss_pred cCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeE
Q 005365 427 LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLY 506 (700)
Q Consensus 427 ~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~ 506 (700)
.++|+|++.|+.+...... . .+ ......++..+ .|+..++.||.||++|....+.+.+ .+ .....+.
T Consensus 120 ~~~~~V~~~h~~~~~~~~~-~-~~-~~~~~~~~~~~--~e~~~~~~ad~ii~vS~~~~~~l~~-~~-------~~~~ki~ 186 (415)
T cd03816 120 RRTKLIIDWHNYGYTILAL-K-LG-ENHPLVRLAKW--YEKLFGRLADYNLCVTKAMKEDLQQ-FN-------NWKIRAT 186 (415)
T ss_pred hCCeEEEEcCCchHHHHhc-c-cC-CCCHHHHHHHH--HHHHHhhcCCEeeecCHHHHHHHHh-hh-------ccCCCee
Confidence 8999999999864321100 0 00 00111122222 3778899999999999776654433 22 1123456
Q ss_pred EeecCCCCCCCcceec-----------------------------CCCCccccccCCchhhhchhhHHHHHHHHhhc---
Q 005365 507 RVVHGIDVFDPKFNIV-----------------------------SPGADMSIYFPYTEEKRRLKSFHPEIEELLYS--- 554 (700)
Q Consensus 507 ~v~nGId~~~~k~~vI-----------------------------p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~--- 554 (700)
+|+||.+ ..+..+ ++.....++.|++.+.||++.+++|+..+...
T Consensus 187 vI~Ng~~---~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~ 263 (415)
T cd03816 187 VLYDRPP---EQFRPLPLEEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAAT 263 (415)
T ss_pred ecCCCCH---HHceeCcHHHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcc
Confidence 6777732 111110 11122345678999999999999999998753
Q ss_pred ---CCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCC---CCCCccHH
Q 005365 555 ---DVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA---LYEAFGLT 628 (700)
Q Consensus 555 ---~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS---~~E~fGl~ 628 (700)
.++..++++|.|. ..++++++++++++.+.+.+.| +++.+++..+|+. +|++|.|+ ..|+||++
T Consensus 264 ~~~~~~i~l~ivG~G~-----~~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l~~-aDv~v~~~~~~~~~~~p~~ 333 (415)
T cd03816 264 GPKLPKLLCIITGKGP-----LKEKYLERIKELKLKKVTIRTP----WLSAEDYPKLLAS-ADLGVSLHTSSSGLDLPMK 333 (415)
T ss_pred cccCCCEEEEEEecCc-----cHHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHHHh-CCEEEEccccccccCCcHH
Confidence 2456677777663 2367888889999976455556 5567999999997 99999753 34789999
Q ss_pred HHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC---HHHHHHHHHHHHHHHHh
Q 005365 629 VVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD---PSYWDKISLGGLKRIEE 699 (700)
Q Consensus 629 vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d---p~~~~~ms~~ar~ra~e 699 (700)
++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| |+.+++|+++|++++++
T Consensus 334 ~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 334 VVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred HHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999994 9999999999998 67 99999999999998764
No 35
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.97 E-value=2.6e-30 Score=281.82 Aligned_cols=331 Identities=14% Similarity=0.168 Sum_probs=220.2
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHC--CCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ--GLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~--GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
|||+++++. + +..||+++++. +++++|.++ ||+|. ++++..+... . .....
T Consensus 1 mkI~~~~~~-~---------~~~GG~e~~~~--------~l~~~L~~~~~g~~v~----v~~~~~~~~~--~---~~~~~ 53 (359)
T PRK09922 1 MKIAFIGEA-V---------SGFGGMETVIS--------NVINTFEESKINCEMF----FFCRNDKMDK--A---WLKEI 53 (359)
T ss_pred CeeEEeccc-c---------cCCCchhHHHH--------HHHHHhhhcCcceeEE----EEecCCCCCh--H---HHHhc
Confidence 899999754 3 34599999999 666667999 77777 7776433110 0 00000
Q ss_pred cCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCc--EE
Q 005365 355 YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVT--QC 432 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP--~V 432 (700)
.-.......++++. ... .....+.+.+++. +||+||+|.....+.+..+++..++| ++
T Consensus 54 ~~~~~~~~~~~~~~----------~~~-------~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (359)
T PRK09922 54 KYAQSFSNIKLSFL----------RRA-------KHVYNFSKWLKET---QPDIVICIDVISCLYANKARKKSGKQFKIF 113 (359)
T ss_pred chhcccccchhhhh----------ccc-------HHHHHHHHHHHhc---CCCEEEEcCHHHHHHHHHHHHHhCCCCeEE
Confidence 00000000011100 000 1112334445444 89999999866666677677766665 45
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
.+.|...... + .+ +...+..+|.++++|....+.+.+. + .....+.+++||+
T Consensus 114 ~~~h~~~~~~-------~-----~~--------~~~~~~~~d~~i~~S~~~~~~~~~~-~-------~~~~ki~vi~N~i 165 (359)
T PRK09922 114 SWPHFSLDHK-------K-----HA--------ECKKITCADYHLAISSGIKEQMMAR-G-------ISAQRISVIYNPV 165 (359)
T ss_pred EEecCccccc-------c-----hh--------hhhhhhcCCEEEEcCHHHHHHHHHc-C-------CCHHHEEEEcCCC
Confidence 5556421110 0 00 0012367999999997765543321 1 1123467889999
Q ss_pred CCCCCccee-cC--CCCccccccCCch--hhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC
Q 005365 513 DVFDPKFNI-VS--PGADMSIYFPYTE--EKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN 587 (700)
Q Consensus 513 d~~~~k~~v-Ip--~G~d~~~F~g~~~--~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~ 587 (700)
+. +.+.. .+ ......+|+|++. +.||+..+++++..+. ++..++++|.|. + .+.++++++++++.
T Consensus 166 d~--~~~~~~~~~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~--~---~~~l~~~~~~~~l~ 235 (359)
T PRK09922 166 EI--KTIIIPPPERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGS--D---FEKCKAYSRELGIE 235 (359)
T ss_pred CH--HHccCCCcccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCc--c---HHHHHHHHHHcCCC
Confidence 73 21111 11 1123467889875 4599999999988763 256677777663 2 35678889999999
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC-CCCcccccccCCeEEEECCCCHH
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~-~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
++|.|+|++.+ +.+++..+|+. +|++|+||.+|+||++++||||||+|||+|+ .||+.|+|.+|.+|++++++|++
T Consensus 236 ~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 236 QRIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred CeEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999997653 24778888886 9999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCHH--HHHHHHHHHHHHHHh
Q 005365 667 QAAEILVDFFEKCKADPS--YWDKISLGGLKRIEE 699 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~--~~~~ms~~ar~ra~e 699 (700)
++|++|.+++ +|++ ....+++++++...+
T Consensus 313 ~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 313 EFVGKLNKVI----SGEVKYQHDAIPNSIERFYEV 343 (359)
T ss_pred HHHHHHHHHH----hCcccCCHHHHHHHHHHhhHH
Confidence 9999999998 7776 355666666665543
No 36
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.97 E-value=1.1e-29 Score=294.48 Aligned_cols=428 Identities=12% Similarity=0.110 Sum_probs=261.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCchHH-------HHHHhhcCCccccCccHHHHHHHHHHHHHhhcCCCccchhhhhcCC
Q 005365 201 LNSLQHVLRKAEEYLTTVVPETPFSEL-------ALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRI 273 (700)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 273 (700)
.+.=..++++|.+..+.=. .-|.+. ..-+|.+|=|----++--|+.-+-+++...-+- .+...+..-
T Consensus 204 ~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--- 277 (694)
T PRK15179 204 LWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRR-RNAEYDAGP--- 277 (694)
T ss_pred HHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhc-CcccccCCC---
Confidence 4444556666655544332 122221 224677777765556667777777777654421 111111100
Q ss_pred Ccce-EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCC------------ceeeccEEEeccCC
Q 005365 274 PMVF-NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGL------------DITPQILIITRLLP 340 (700)
Q Consensus 274 pm~m-kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~Gh------------eV~~~i~VvT~~~p 340 (700)
-.+. ||+++.+.. ..||.|++++ .|+.+|.++|. ++. |++....
T Consensus 278 ~~~~~rIl~vi~sl-----------~~GGAEr~~~--------~La~~l~~~~~~~~~~~g~g~~~~~~----V~~~~~~ 334 (694)
T PRK15179 278 ESFVGPVLMINGSL-----------GAGGAERQFV--------NTAVALQSAIQQGQSIAGYGVLGPVQ----VVCRSLR 334 (694)
T ss_pred CCCcceEEEEeCCC-----------CCCcHHHHHH--------HHHHHHHhcccCcccccCccCCCCcE----EEEEecc
Confidence 0124 788886443 3599999999 55555677744 234 4332111
Q ss_pred CCCCC-CCccceeEecCccceEEEEecCCCccccc--cccccc-----ccchhhHHHHHHHHHHHHHHHcCCCCeEEEEc
Q 005365 341 DAVGT-TCGQRLEKVYGTKYSDILRVPFRTEKGVV--RKWISR-----FEVWPYLETYTEDVAVEIAKELQGKPDLIIGN 412 (700)
Q Consensus 341 ~~~~~-~~~~~~e~i~~~~~v~I~rvp~~~~~~~~--~~~lsr-----~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h 412 (700)
...++ .+...++ ..++.+..++.....+.. ..++.. ..+-.........+.+.+++. +|||||+|
T Consensus 335 ~~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~---kpDIVH~h 407 (694)
T PRK15179 335 SREGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSS---VPSVVHIW 407 (694)
T ss_pred cccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHc---CCcEEEEe
Confidence 11111 1111111 124555555443321100 000000 000011122334455555554 89999999
Q ss_pred CCCchHHHHHHHHhcCCcEEE-EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhh
Q 005365 413 YSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTV 491 (700)
Q Consensus 413 ~~~~~lva~lla~~~giP~V~-t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~ 491 (700)
....++++.++++..++|+|+ +.|+....... ..|+ ..|.... ..+....++.+|++|....+.+.+.+
T Consensus 408 ~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~---~~~~---~~~~~l~----~~l~~~~~~i~Vs~S~~~~~~l~~~~ 477 (694)
T PRK15179 408 QDGSIFACALAALLAGVPRIVLSVRTMPPVDRP---DRYR---VEYDIIY----SELLKMRGVALSSNSQFAAHRYADWL 477 (694)
T ss_pred CCcHHHHHHHHHHHcCCCEEEEEeCCCccccch---hHHH---HHHHHHH----HHHHhcCCeEEEeCcHHHHHHHHHHc
Confidence 999888888888889999876 55764322111 0111 0111111 11112234566666755543333222
Q ss_pred ccccccccccCCCeEEeecCCCCCCCcce-------------e-cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCC
Q 005365 492 GQYESHTAFTLPGLYRVVHGIDVFDPKFN-------------I-VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (700)
Q Consensus 492 ~~y~~~~~~~~p~l~~v~nGId~~~~k~~-------------v-Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~ 557 (700)
+ +....+.+|+|||+.. ++. . .+.+.....++|++.+.||.+.+++|+..+....++
T Consensus 478 g-------~~~~kI~VI~NGVd~~--~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~ 548 (694)
T PRK15179 478 G-------VDERRIPVVYNGLAPL--KSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPK 548 (694)
T ss_pred C-------CChhHEEEECCCcCHH--hcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcC
Confidence 2 1223477899999842 111 0 122233556889999999999999999999888788
Q ss_pred ccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC
Q 005365 558 NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 637 (700)
Q Consensus 558 ~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl 637 (700)
..++|+|.|. ..++++++++++++.++|.|+|++. ++..+|+. +|+||+||.+|+||++++|||+||+
T Consensus 549 ~~LvIvG~G~-----~~~~L~~l~~~lgL~~~V~flG~~~------dv~~ll~a-aDv~VlpS~~Egfp~vlLEAMA~G~ 616 (694)
T PRK15179 549 VRFIMVGGGP-----LLESVREFAQRLGMGERILFTGLSR------RVGYWLTQ-FNAFLLLSRFEGLPNVLIEAQFSGV 616 (694)
T ss_pred eEEEEEccCc-----chHHHHHHHHHcCCCCcEEEcCCcc------hHHHHHHh-cCEEEeccccccchHHHHHHHHcCC
Confidence 8888888763 2367889999999999999999643 56778886 9999999999999999999999999
Q ss_pred CEEEcCCCCcccccccCCeEEEECCCCH--HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 638 PTFATCKGGPAEIIVNGKSGYHIDPYHG--EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 638 PVVAT~~GG~~EiI~dg~~G~lv~p~D~--eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|||+|+.||++|+|.++.+|++++++|+ ++++++|.+++..+..+ ..++++|++++.+
T Consensus 617 PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~----~~l~~~ar~~a~~ 676 (694)
T PRK15179 617 PVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAAD----PGIARKAADWASA 676 (694)
T ss_pred eEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhcc----HHHHHHHHHHHHH
Confidence 9999999999999999999999998874 68999999988433344 4566777777754
No 37
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.97 E-value=1.8e-29 Score=269.77 Aligned_cols=304 Identities=17% Similarity=0.191 Sum_probs=210.9
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||+++++..+|. +.|..||.++++. +|++.|.++||+|+ +++...+.... ..
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 7999999876652 2367899999999 66667799999999 99865432110 00
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H 436 (700)
......+... ...............+.+.+.+ .+||+||+|....... +++..++|+|++.|
T Consensus 54 ---~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLRL---------DAPGRDRAEAEALALAERALAA---GDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCccc---------ccchhhHhhHHHHHHHHHHHhc---CCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0100000000 0000001111222223333333 3899999998777655 56778999999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+....... + ........+.++++|....+.... .....+++||++ .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~~~~------------~~~~~vi~ngvd--~ 161 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRPWPP------------LPWVATVHNGID--L 161 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhhccc------------ccccEEecCCcC--h
Confidence 86433210 0 012356678899999665432111 145778899998 3
Q ss_pred CcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC-CCCcEEEecc
Q 005365 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK-LNGQFRWISS 595 (700)
Q Consensus 517 ~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~-L~~~V~flG~ 595 (700)
+.+...+...+..+|.|+..+.||.+.+++++... +..++++|.|+..+ .+...+.+.. +.++|.|+|
T Consensus 162 ~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~~-----~~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~v~~~G- 230 (335)
T cd03802 162 DDYPFRGPKGDYLLFLGRISPEKGPHLAIRAARRA-----GIPLKLAGPVSDPD-----YFYREIAPELLDGPDIEYLG- 230 (335)
T ss_pred hhCCCCCCCCCEEEEEEeeccccCHHHHHHHHHhc-----CCeEEEEeCCCCHH-----HHHHHHHHhcccCCcEEEeC-
Confidence 34443455666788999999999999999887543 56788888875432 2233333332 568899999
Q ss_pred ccCcCChhHHHHHHHccCcEEEeCCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHH
Q 005365 596 QMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVD 674 (700)
Q Consensus 596 ~~d~v~~~el~~~la~~aDvfV~PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ 674 (700)
.++.+++..+++. +|++|+||. .|+||++++||||||+|||+|+.||..|++.++.+|+++++ +++++++|..
T Consensus 231 ---~~~~~~~~~~~~~-~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~ 304 (335)
T cd03802 231 ---EVGGAEKAELLGN-ARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVAR 304 (335)
T ss_pred ---CCCHHHHHHHHHh-CcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHH
Confidence 5566899999997 999999997 59999999999999999999999999999999999999986 9999999998
Q ss_pred HH
Q 005365 675 FF 676 (700)
Q Consensus 675 ll 676 (700)
+.
T Consensus 305 l~ 306 (335)
T cd03802 305 AD 306 (335)
T ss_pred Hh
Confidence 86
No 38
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.97 E-value=2.8e-29 Score=268.82 Aligned_cols=347 Identities=18% Similarity=0.230 Sum_probs=240.7
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++..++ |+.||...++. .++++|+++||+|+ ++|...+...... ...
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~------~~~-- 51 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE------EVV-- 51 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc------ccc--
Confidence 6899987654 56789999998 77777899999999 8886644321110 000
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H 436 (700)
.....+.+.... ......+. +...+...+.. .+||+||++... .+..+..++++.++|++++.|
T Consensus 52 -~~~~~~~~~~~~-------~~~~~~~~----~~~~~~~~~~~---~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 52 -VVRPFRVPTFKY-------PDFRLPLP----IPRALIIILKE---LGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred -cccccccccchh-------hhhhcccc----HHHHHHHHHhh---cCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 111111111100 00000111 11112222333 389999998743 345677788889999999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhh-hHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQF-TADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~-~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~ 515 (700)
+..... ....... ......... ..++..++.||.|++.|....+. +..+. .. .....+++|++..
T Consensus 117 ~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~----~~~~~----~~-~~~~vi~~~~~~~ 182 (374)
T cd03817 117 TMYEDY-THYVPLG----RLLARAVVRRKLSRRFYNRCDAVIAPSEKIADL----LREYG----VK-RPIEVIPTGIDLD 182 (374)
T ss_pred CCHHHH-HHHHhcc----cchhHHHHHHHHHHHHhhhCCEEEeccHHHHHH----HHhcC----CC-CceEEcCCccchh
Confidence 864311 1000000 000000011 23667889999999999765443 32221 11 1266778888732
Q ss_pred CCccee-----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc
Q 005365 516 DPKFNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY 584 (700)
Q Consensus 516 ~~k~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l 584 (700)
.+.. ..+.....+|.|+..+.||++.+++++..+....++..++++|.|. ..+.+.++++++
T Consensus 183 --~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~-----~~~~~~~~~~~~ 255 (374)
T cd03817 183 --RFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP-----EREELEELAREL 255 (374)
T ss_pred --ccCccchhHHHHhcCCCCCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc-----hHHHHHHHHHHc
Confidence 2111 1223345678999999999999999999988776677888888763 235677788888
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCC
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 664 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D 664 (700)
++.++|.|+| .++.+++..+++. +|++++||..|++|++++|||+||+|||+|+.|+..|++.++.+|++++++|
T Consensus 256 ~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~ 330 (374)
T cd03817 256 GLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGD 330 (374)
T ss_pred CCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCC
Confidence 9999999999 5667899999997 9999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 665 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 665 ~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
. +++++|..++ +|++.+++|++++++.+.+
T Consensus 331 ~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 331 E-ALAEALLRLL----QDPELRRRLSKNAEESAEK 360 (374)
T ss_pred H-HHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 7 9999999998 8999999999999998765
No 39
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.97 E-value=4.9e-29 Score=267.61 Aligned_cols=366 Identities=17% Similarity=0.171 Sum_probs=245.4
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++.+.+| ..||.+.++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFPP---------ELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccCC---------ccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 68999976653 3488899999 66667799999999 8886533221111000 001112
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCC--CchHHHHHHHHhcCCcEEEEe
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS--DGNIVASLLAHKLGVTQCTIA 435 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~--~~~lva~lla~~~giP~V~t~ 435 (700)
.++++++++...... ..++.+ +..+ ..|.......+.. ...+||+||++.+ .....+..+++..++|++++.
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 356777776554321 000000 1111 1222222333321 2348999999862 233455666677799999999
Q ss_pred cCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCC
Q 005365 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (700)
Q Consensus 436 H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~ 515 (700)
|+.+............. ...+.+.. ..++..++.+|.++++|....+.+. ..+ ........++||++..
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~d~vi~~s~~~~~~~~-~~~-------~~~~~~~~i~~~~~~~ 200 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRLLR--KLERLIYRRADAIVVISPGMREYLV-RRG-------VPPEKISVIPNGVDLE 200 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHHHH--HHHHHHHhcCCEEEEECHHHHHHHH-hcC-------CCcCceEEcCCCCCHH
Confidence 98754332111100000 00011122 2366789999999999977765443 111 1223467778888631
Q ss_pred CCcce---------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC
Q 005365 516 DPKFN---------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 516 ~~k~~---------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L 586 (700)
..... ....+....+|.|+..+.||++.+++++..+... ++..++++|.|.. .+.+.+.+...++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~~~l~i~G~~~~-----~~~~~~~~~~~~~ 274 (394)
T cd03794 201 LFKPPPADESLRKELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-PDIRFLIVGDGPE-----KEELKELAKALGL 274 (394)
T ss_pred HcCCccchhhhhhccCCCCcEEEEEecCcccccCHHHHHHHHHHHhhc-CCeEEEEeCCccc-----HHHHHHHHHHcCC
Confidence 11100 1123344567899999999999999999998776 6677888776643 2345555556666
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCc-----cHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEEC
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF-----GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHID 661 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~f-----Gl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~ 661 (700)
++|.|+| .++.+++..+++. +|++++|+..|++ |++++|||+||+|||+|+.+|..+++.++.+|++++
T Consensus 275 -~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~ 348 (394)
T cd03794 275 -DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVP 348 (394)
T ss_pred -CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeC
Confidence 4699999 6667899999997 9999999998875 888999999999999999999999999989999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 662 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 662 p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++|+++++++|.+++ .|++.+++|+++|++++.+
T Consensus 349 ~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 349 PGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred CCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 999999999999998 8999999999999998874
No 40
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.97 E-value=1.4e-28 Score=260.83 Aligned_cols=350 Identities=19% Similarity=0.266 Sum_probs=246.5
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++... |..||...++. .|++.|.+.||+|+ +++......... .....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~------~~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDE------EEVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCce------eeecC-
Confidence 6899987654 22589999999 66777789999999 888654332111 00000
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.......... ..........+...+...+... +||+||.+...........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRLLRRE---RFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHHhhhc---CCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 0001111112222233333333 899999998777766657778889999999999
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
......... .. .........+...++.+|.+++.|....+.+.+.... .......+++|++....
T Consensus 118 ~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~ 182 (374)
T cd03801 118 LEFGRPGNE--LG------LLLKLARALERRALRRADRIIAVSEATREELRELGGV-------PPEKITVIPNGVDTERF 182 (374)
T ss_pred chhhccccc--hh------HHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCC-------CCCcEEEecCccccccc
Confidence 765432211 00 0001111235677999999999997776544443321 11246778888874221
Q ss_pred c--------ceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 518 K--------FNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 518 k--------~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
. .....+.....+|.|+....||++.+++++..+....++..+++.|.+ .....+.+.+++++..++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~-----~~~~~~~~~~~~~~~~~~ 257 (374)
T cd03801 183 RPAPRAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDG-----PLREELEALAAELGLGDR 257 (374)
T ss_pred CccchHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCc-----HHHHHHHHHHHHhCCCcc
Confidence 1 111123334678999999999999999999999877677888888855 334567777788889999
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 669 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLA 669 (700)
|.|+| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+|+.++..|++.++.+|+++++.|+++++
T Consensus 258 v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 332 (374)
T cd03801 258 VTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALA 332 (374)
T ss_pred eEEEe----ccChhhHHHHHHh-cCEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHH
Confidence 99999 5567899999997 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 670 EILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 670 eaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++|.+++ +|++.+.+|++++++.+.+
T Consensus 333 ~~i~~~~----~~~~~~~~~~~~~~~~~~~ 358 (374)
T cd03801 333 EAILRLL----DDPELRRRLGEAARERVAE 358 (374)
T ss_pred HHHHHHH----cChHHHHHHHHHHHHHHHH
Confidence 9999998 8999999999999866553
No 41
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.97 E-value=1.4e-28 Score=264.27 Aligned_cols=337 Identities=14% Similarity=0.144 Sum_probs=229.4
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++. + |..||.+.++. +|+++|++.||+|+ +++............ ..
T Consensus 1 kI~~v~~~-~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPY-P---------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCC-C---------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 68999864 2 34699999999 67777799999999 777543221110000 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc---hH---HHHHHHHhcCCcE
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG---NI---VASLLAHKLGVTQ 431 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~---~l---va~lla~~~giP~ 431 (700)
....... . .... ....+.+.+... +||+||++.+.+ .. ......+..++|+
T Consensus 52 ~~~~~~~--~-------------~~~~-----~~~~~~~~~~~~---~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV--L-------------DNPL-----DYRRAARAIRLS---GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee--c-------------CCch-----hHHHHHHHHhhc---CCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0 0000 011223333333 899999976322 12 2222234479999
Q ss_pred EEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecC
Q 005365 432 CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 511 (700)
Q Consensus 432 V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nG 511 (700)
|++.|+..... . .+. ....++..++.+|.|+++|... .++.+.... .....+++||
T Consensus 109 i~~~h~~~~~~----~-~~~----------~~~~~~~~~~~~d~ii~~s~~~---~~~~~~~~~------~~~~~~i~~~ 164 (366)
T cd03822 109 VVTLHTVLLHE----P-RPG----------DRALLRLLLRRADAVIVMSSEL---LRALLLRAY------PEKIAVIPHG 164 (366)
T ss_pred EEEEecCCccc----c-chh----------hhHHHHHHHhcCCEEEEeeHHH---HHHHHhhcC------CCcEEEeCCC
Confidence 99999861110 0 000 0112446688999999997222 233333221 1346778889
Q ss_pred CCCCCCcce------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC
Q 005365 512 IDVFDPKFN------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK 585 (700)
Q Consensus 512 Id~~~~k~~------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~ 585 (700)
++....... ..++.....+|+|+..+.||++.+++++..+....++..++++|.+............+++++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~ 244 (366)
T cd03822 165 VPDPPAEPPESLKALGGLDGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLG 244 (366)
T ss_pred CcCcccCCchhhHhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcC
Confidence 873222111 02334456789999999999999999999998877778888888765432211111114578889
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCC--CccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 663 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E--~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~ 663 (700)
+.++|.|+|. .++.+++..+++. +|++++||.+| +||++++|||+||+|||+|+.|+ .+.+.++.+|++++++
T Consensus 245 ~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~ 319 (366)
T cd03822 245 LADRVIFINR---YLPDEELPELFSA-ADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPG 319 (366)
T ss_pred CCCcEEEecC---cCCHHHHHHHHhh-cCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCC
Confidence 9999999982 2667899999997 99999999999 99999999999999999999999 7777888899999999
Q ss_pred CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 664 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 664 D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+++++++|..++ +|++.+.+|++++++.+.+
T Consensus 320 d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~~ 351 (366)
T cd03822 320 DPAALAEAIRRLL----ADPELAQALRARAREYARA 351 (366)
T ss_pred CHHHHHHHHHHHH----cChHHHHHHHHHHHHHHhh
Confidence 9999999999998 8999999999999988754
No 42
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.97 E-value=2.2e-29 Score=275.49 Aligned_cols=257 Identities=16% Similarity=0.157 Sum_probs=188.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.+||+||+|.+....+ ..+.+..++|+|++.|+..... ....|+ + .+..++.+|.+++.|...
T Consensus 84 ~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------~------~~~~~~~~d~~i~~~~~~ 146 (372)
T cd03792 84 LDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVWD-------F------LQPYIEDYDAAVFHLPEY 146 (372)
T ss_pred CCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHHH-------H------HHHHHHhCCEEeecHHHh
Confidence 4899999998764332 2223334899999999753211 111111 1 234578899999888332
Q ss_pred HHhhhhhhccccccccccCCCeEEeecCCCCCCC---cce-----------ecCCCCccccccCCchhhhchhhHHHHHH
Q 005365 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP---KFN-----------IVSPGADMSIYFPYTEEKRRLKSFHPEIE 549 (700)
Q Consensus 484 ~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~---k~~-----------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~ 549 (700)
+. ..+ .+...+++||+|.... .++ -++++....+|.|++.+.||++.++++++
T Consensus 147 ~~---~~~----------~~~~~vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~ 213 (372)
T cd03792 147 VP---PQV----------PPRKVIIPPSIDPLSGKNRELSPADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYR 213 (372)
T ss_pred cC---CCC----------CCceEEeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHH
Confidence 21 111 1223378899985321 000 02334456789999999999999999999
Q ss_pred HHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHH
Q 005365 550 ELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 629 (700)
Q Consensus 550 ~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~v 629 (700)
.+....++..++++|.|........+.++++.+..++.++|.|+|... ++.+++..+++. +|+||+||.+|+||+++
T Consensus 214 ~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~-ad~~v~~s~~Eg~g~~~ 290 (372)
T cd03792 214 KVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPP--VSDLEVNALQRA-STVVLQKSIREGFGLTV 290 (372)
T ss_pred HHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCC--CCHHHHHHHHHh-CeEEEeCCCccCCCHHH
Confidence 988776788899998875422122234455555678888999999542 356888899886 99999999999999999
Q ss_pred HHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 630 VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 630 lEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+||||||+|||+|+.||..++|.++.+|++++ ++++++++|.+++ .|++.+++|+++|++++.+
T Consensus 291 lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~~i~~ll----~~~~~~~~~~~~a~~~~~~ 354 (372)
T cd03792 291 TEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAVRILYLL----RDPELRRKMGANAREHVRE 354 (372)
T ss_pred HHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999987 4678889999988 8999999999999998754
No 43
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.97 E-value=3.6e-28 Score=257.93 Aligned_cols=343 Identities=15% Similarity=0.203 Sum_probs=238.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++.. .||.+.++. .|++.|.++||+|+ +++....... . ...
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~------~----~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE------E----LEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc------c----ccc
Confidence 57888754 278888888 67777799999999 8886533211 0 011
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHH-hcCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~-~~giP~V~t~H 436 (700)
.++.++.+|..... .+ .+..+. ....+.+.+.+ .+||+||++.......+.+.++ ..+.+++++.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~~-~~~~~~~~~~~---~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDLK-ALLRLYRLLRK---ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHHH-HHHHHHHHHHh---cCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 24566666654311 01 111111 11223333433 3899999998777777776666 44567788888
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+......... ..+ .. ....++..++.+|.+++.|....+.+.+..... ........++|++...
T Consensus 113 ~~~~~~~~~~-~~~-------~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 176 (359)
T cd03808 113 GLGFVFTSGG-LKR-------RL--YLLLERLALRFTDKVIFQNEDDRDLALKLGIIK------KKKTVLIPGSGVDLDR 176 (359)
T ss_pred Ccchhhccch-hHH-------HH--HHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCC------cCceEEecCCCCChhh
Confidence 7643321111 000 11 112356778899999999977765443332110 0122344456666321
Q ss_pred Cccee--cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEec
Q 005365 517 PKFNI--VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 594 (700)
Q Consensus 517 ~k~~v--Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG 594 (700)
..... .+++....+|.|+..+.||++.+++++..+....++..++++|.+...+. .... ++.+.+..++|+|+|
T Consensus 177 ~~~~~~~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~--~~~~--~~~~~~~~~~v~~~g 252 (359)
T cd03808 177 FSPSPEPIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENP--AAIL--EIEKLGLEGRVEFLG 252 (359)
T ss_pred cCccccccCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchh--hHHH--HHHhcCCcceEEEee
Confidence 11111 13345577899999999999999999999987777888899888765432 1111 466677888999999
Q ss_pred cccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHH
Q 005365 595 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVD 674 (700)
Q Consensus 595 ~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ 674 (700)
+ .+++..+++. +|++++||..|+||++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.+
T Consensus 253 ~------~~~~~~~~~~-adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~ 325 (359)
T cd03808 253 F------RDDVPELLAA-ADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIER 325 (359)
T ss_pred c------cccHHHHHHh-ccEEEecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHH
Confidence 5 3568888886 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 675 FFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 675 ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++ .|++.+.+++++|++++.+
T Consensus 326 l~----~~~~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 326 LI----EDPELRARMGQAARKRAEE 346 (359)
T ss_pred HH----hCHHHHHHHHHHHHHHHHH
Confidence 87 8999999999999999754
No 44
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.97 E-value=1.2e-29 Score=261.80 Aligned_cols=336 Identities=15% Similarity=0.177 Sum_probs=233.9
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
++|+|+|++.|| .+||.+.++. .|++.|.+.||.|. |+|..+.+..|-. ..
T Consensus 1 ~~i~mVsdff~P---------~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~gir------yl-- 51 (426)
T KOG1111|consen 1 SRILMVSDFFYP---------STGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIR------YL-- 51 (426)
T ss_pred CcceeeCccccc---------CCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCcccee------ee--
Confidence 479999999995 4699999999 88889999999999 9998887765432 22
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchH--HHHHHHHhcCCcEEEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI--VASLLAHKLGVTQCTI 434 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~l--va~lla~~~giP~V~t 434 (700)
+.+..++.+|+... .+....|.+...+.-+...+.++ +..+||+|.+.+.+ -+...++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lrE---~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLRE---RIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhhh---ceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 23578888887542 12223333322222233344444 78999999987766 4777888999999999
Q ss_pred ecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC
Q 005365 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (700)
Q Consensus 435 ~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~ 514 (700)
-|++.-..-..+ .|- ..... ..+...|.+||+|+..++.+ +- . .......+.+|+|.++.
T Consensus 121 dHSlfGfad~~s--i~~--n~ll~---------~sL~~id~~IcVshtskent---vl-r---~~L~p~kvsvIPnAv~~ 180 (426)
T KOG1111|consen 121 DHSLFGFADIGS--ILT--NKLLP---------LSLANIDRIICVSHTSKENT---VL-R---GALAPAKVSVIPNAVVT 180 (426)
T ss_pred ccccccccchhh--hhh--cceee---------eeecCCCcEEEEeecCCCce---EE-E---eccCHhHeeeccceeec
Confidence 999743321111 111 11111 24667899999996554311 00 0 00111123334444331
Q ss_pred --CCC-cceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEE
Q 005365 515 --FDP-KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFR 591 (700)
Q Consensus 515 --~~~-k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~ 591 (700)
|.| ....-+++.-+.+..+|+-..||.+.+++.++++....|+.++.++|. |+ ....+++..+++.+.++|.
T Consensus 181 ~~f~P~~~~~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GD--GP---k~i~lee~lEk~~l~~rV~ 255 (426)
T KOG1111|consen 181 HTFTPDAADKPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGD--GP---KRIDLEEMLEKLFLQDRVV 255 (426)
T ss_pred cccccCccccCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecC--Cc---ccchHHHHHHHhhccCceE
Confidence 111 111111222344455566778999999999999999888877766654 44 3356777888899999999
Q ss_pred EeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHH
Q 005365 592 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 671 (700)
Q Consensus 592 flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAea 671 (700)
++| .++.+++-+.+.+ .|+|++||+.|+||++++|||+||+|||+|.+||++|++.++ -......++++++++
T Consensus 256 ~lG----~v~h~~Vr~vl~~-G~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~ 328 (426)
T KOG1111|consen 256 MLG----TVPHDRVRDVLVR-GDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGA 328 (426)
T ss_pred Eec----ccchHHHHHHHhc-CcEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHH
Confidence 999 7778999999997 999999999999999999999999999999999999999664 222444589999999
Q ss_pred HHHHHHhccCCHH
Q 005365 672 LVDFFEKCKADPS 684 (700)
Q Consensus 672 I~~ll~~~~~dp~ 684 (700)
+.+.+.+....|.
T Consensus 329 v~~ai~~~~~~p~ 341 (426)
T KOG1111|consen 329 VEKAITKLRTLPL 341 (426)
T ss_pred HHHHHHHhccCch
Confidence 9999988877755
No 45
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.97 E-value=2.3e-28 Score=258.28 Aligned_cols=333 Identities=14% Similarity=0.151 Sum_probs=232.7
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++...+ .||.+.++. +|+++|+++||+|+ +++....+. ... ...
T Consensus 1 kI~i~~~~~~~----------~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~--~~~-------~~~ 49 (348)
T cd03820 1 KILFVIPSLGN----------AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEP--PFY-------ELD 49 (348)
T ss_pred CeEEEeccccC----------CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCC--Ccc-------ccC
Confidence 68888866542 589999999 67777799999999 888654320 000 011
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCC-cEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGV-TQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~gi-P~V~t~H 436 (700)
.++.+..++....... +.+ ..+...+.+.+.. .+||+||.+... ..........+. |++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~l~~---~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSKL----------LAR-FKKLRRLRKLLKN---NKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccch----------hcc-ccchHHHHHhhcc---cCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 2344444443321100 000 0111223333333 389999998866 222223333444 9999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+....... ...| ...++..++.+|.+++.|..... .... ........++||++...
T Consensus 114 ~~~~~~~~--~~~~------------~~~~~~~~~~~d~ii~~s~~~~~---~~~~-------~~~~~~~vi~~~~~~~~ 169 (348)
T cd03820 114 NSPDAYKK--RLRR------------LLLRRLLYRRADAVVVLTEEDRA---LYYK-------KFNKNVVVIPNPLPFPP 169 (348)
T ss_pred CCccchhh--hhHH------------HHHHHHHHhcCCEEEEeCHHHHH---Hhhc-------cCCCCeEEecCCcChhh
Confidence 76432210 0011 00255779999999999976641 1111 12234777888987422
Q ss_pred CcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005365 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 596 (700)
Q Consensus 517 ~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~ 596 (700)
.... .+......+|+|+..+.||++.+++++..+....++..++++|.+... ..+.++++++++.++|.|.|.
T Consensus 170 ~~~~-~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~-----~~~~~~~~~~~~~~~v~~~g~- 242 (348)
T cd03820 170 EEPS-SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPER-----EALEALIKELGLEDRVILLGF- 242 (348)
T ss_pred cccc-CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCCH-----HHHHHHHHHcCCCCeEEEcCC-
Confidence 2111 245556788999999999999999999999877778888888876432 456677888999999999994
Q ss_pred cCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC-CcccccccCCeEEEECCCCHHHHHHHHHHH
Q 005365 597 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675 (700)
Q Consensus 597 ~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G-G~~EiI~dg~~G~lv~p~D~eaLAeaI~~l 675 (700)
.+++..+++. +|++++||.+|+||++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.++
T Consensus 243 -----~~~~~~~~~~-ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~l 316 (348)
T cd03820 243 -----TKNIEEYYAK-ASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRL 316 (348)
T ss_pred -----cchHHHHHHh-CCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHH
Confidence 4678889987 999999999999999999999999999999864 567788887899999999999999999999
Q ss_pred HHhccCCHHHHHHHHHHHHHHHH
Q 005365 676 FEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 676 l~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
+ +||+.+++|+++|++.++
T Consensus 317 l----~~~~~~~~~~~~~~~~~~ 335 (348)
T cd03820 317 M----EDEELRKRMGANARESAE 335 (348)
T ss_pred H----cCHHHHHHHHHHHHHHHH
Confidence 8 899999999999977654
No 46
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.97 E-value=3.2e-28 Score=259.93 Aligned_cols=338 Identities=14% Similarity=0.128 Sum_probs=226.7
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++...| ..+||.+.++. .|+++|+++||+|+ |++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68999866543 23689999999 66666789999999 888653322111000
Q ss_pred cceEEEEecC--CCcccccccccccccchhhH-HHHHHHHHHHHHHHcCCCCeEEEEcCCCch-HHHHHHHHhcCCcEEE
Q 005365 358 KYSDILRVPF--RTEKGVVRKWISRFEVWPYL-ETYTEDVAVEIAKELQGKPDLIIGNYSDGN-IVASLLAHKLGVTQCT 433 (700)
Q Consensus 358 ~~v~I~rvp~--~~~~~~~~~~lsr~~i~~~l-~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~-lva~lla~~~giP~V~ 433 (700)
.+..+...+. ........ .......+. ..+...+.+.+.+. +||+||+|..... ......++..++|+++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALPR---DLFHLSDYDNPAVVAEFARLLEDF---RPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCchh---hhhHHHhccCHHHHHHHHHHHHHc---CCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111100 00000000 000000010 11222233334333 8999999875332 3344556778899999
Q ss_pred EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCC
Q 005365 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (700)
Q Consensus 434 t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId 513 (700)
+.|+.+..... . .......|.++++|....+.+.+... .......++||++
T Consensus 126 ~~hd~~~~~~~------~---------------~~~~~~~d~ii~~s~~~~~~~~~~~~--------~~~~~~vi~n~~~ 176 (359)
T cd03823 126 TLHDYWLICPR------Q---------------GLFKKGGDAVIAPSRFLLDRYVANGL--------FAEKISVIRNGID 176 (359)
T ss_pred EEeeeeeecch------h---------------hhhccCCCEEEEeCHHHHHHHHHcCC--------CccceEEecCCcC
Confidence 99976432210 0 01122339999999776554333211 1234678889988
Q ss_pred CCCCccee--cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEE
Q 005365 514 VFDPKFNI--VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFR 591 (700)
Q Consensus 514 ~~~~k~~v--Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~ 591 (700)
........ .+......+|.|+..+.||++.+++++..+.. ++..++++|.+..... ..... +..++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~~~l~i~G~~~~~~~-----~~~~~---~~~~~v~ 246 (359)
T cd03823 177 LDRAKRPRRAPPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR--GDIELVIVGNGLELEE-----ESYEL---EGDPRVE 246 (359)
T ss_pred hhhccccccCCCCCceEEEEEecCccccCHHHHHHHHHHHHh--cCcEEEEEcCchhhhH-----HHHhh---cCCCeEE
Confidence 43221111 23334456789999999999999999998876 5778888887754321 11111 5668899
Q ss_pred EeccccCcCChhHHHHHHHccCcEEEeCCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHH
Q 005365 592 WISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670 (700)
Q Consensus 592 flG~~~d~v~~~el~~~la~~aDvfV~PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAe 670 (700)
|+| .++.+++..+++. +|++++||. .|+||++++|||+||+|||+|+.||..|++.++.+|++++++|++++++
T Consensus 247 ~~g----~~~~~~~~~~~~~-ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~ 321 (359)
T cd03823 247 FLG----AYPQEEIDDFYAE-IDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAA 321 (359)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHH
Confidence 999 5667999999997 999999997 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 671 ILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 671 aI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
+|.+++ +|++.+++++++++++..
T Consensus 322 ~i~~l~----~~~~~~~~~~~~~~~~~~ 345 (359)
T cd03823 322 ALERLI----DDPDLLERLRAGIEPPRS 345 (359)
T ss_pred HHHHHH----hChHHHHHHHHhHHHhhh
Confidence 999998 799999999999988764
No 47
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.97 E-value=1.9e-28 Score=263.06 Aligned_cols=345 Identities=18% Similarity=0.176 Sum_probs=237.2
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++.+..++ ..||++.|+. +|+++|++.||+|+ +++............ ..
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hh--
Confidence 688888665531 4699999999 66677799999999 877653322111000 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecC
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~ 437 (700)
.... . ... .....+.............+.. .+||+||++.+..... +..++|+++++|+
T Consensus 54 -~~~~--~-~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL--L-LRL---------PRRLLWGLLFLLRAGDRLLLLL---LGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc--c-ccc---------ccccccchhhHHHHHHHHHhhh---cCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 0 000 0011111111111112222222 3899999988665544 5678999999998
Q ss_pred CccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC
Q 005365 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (700)
Q Consensus 438 l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~ 517 (700)
............+ ........++..++.+|.+++.|...++.+.+.++.. ...+..++||++....
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~-------~~~~~vi~~~~~~~~~ 178 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLRYLGVP-------PDKIVVIPLGVDPRFR 178 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHhCcC-------HHHEEeeccccCcccc
Confidence 7654433221111 0011112356789999999999987776555544311 1235677888874222
Q ss_pred cce--------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 518 KFN--------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 518 k~~--------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
... ..+......+|.|+..+.||++.+++++..+....++..++++|.+...... ..+.+++.++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~----~~~~~~~~~~~~~ 254 (365)
T cd03809 179 PPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEE----LLARLRELGLGDR 254 (365)
T ss_pred CCCchHHHHHHhcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHH----HHHHHHHcCCCCe
Confidence 111 2233445678999999999999999999999887667788888876544322 2233366788999
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 669 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLA 669 (700)
|.|+| .++.+++..+++. +|++++||..|+||++++|||+||+|||+|+.|+..|++. .+|++++++|+++++
T Consensus 255 v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~ 327 (365)
T cd03809 255 VRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALA 327 (365)
T ss_pred EEECC----CCChhHHHHHHhh-hhhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHH
Confidence 99999 5667899999997 9999999999999999999999999999999999999994 579999999999999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 670 EILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 670 eaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++|.+++ +|++.+.+++++|++.+.+
T Consensus 328 ~~i~~l~----~~~~~~~~~~~~~~~~~~~ 353 (365)
T cd03809 328 AAIERLL----EDPALREELRERGLARAKR 353 (365)
T ss_pred HHHHHHh----cCHHHHHHHHHHHHHHHHh
Confidence 9999987 8999999999999876653
No 48
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.97 E-value=3.9e-28 Score=260.13 Aligned_cols=336 Identities=18% Similarity=0.213 Sum_probs=230.7
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++..+. |..||.+.++. .|+++|+++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899987654 34589999999 67777899999999 888653221110 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc-hHHHHHHHHhcCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~-~lva~lla~~~giP~V~t~H 436 (700)
....+...+......+ . .... ....+.+.+... +||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~-~-----~~~~-----~~~~~~~~~~~~---~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI-R-----LALP-----PRRRVRRLLDAF---APDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce-E-----eccc-----chhhHHHHHHhc---CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222222111110 0 0000 011122233333 899999976433 45667778889999999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+............+ ...+. ...++...+.+|.+++.|....+ .+.. ...+....+++|++.
T Consensus 116 ~~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~d~i~~~s~~~~~----~~~~------~~~~~~~~~~~g~~~-- 176 (364)
T cd03814 116 TDFPEYLRYYGLGP-----LSWLA--WAYLRWFHNRADRVLVPSPSLAD----ELRA------RGFRRVRLWPRGVDT-- 176 (364)
T ss_pred cChHHHhhhcccch-----HhHhh--HHHHHHHHHhCCEEEeCCHHHHH----HHhc------cCCCceeecCCCccc--
Confidence 76432111000000 00000 11245678899999999977654 1111 112345667778763
Q ss_pred Ccceec-----------CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC
Q 005365 517 PKFNIV-----------SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK 585 (700)
Q Consensus 517 ~k~~vI-----------p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~ 585 (700)
..+... +++....+|.|+..+.||.+.+++++..+... ++..++++|.|... ..++ +
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-~~~~l~i~G~~~~~-----~~~~------~ 244 (364)
T cd03814 177 ELFHPRRRDEALRARLGPPDRPVLLYVGRLAPEKNLEALLDADLPLRRR-PPVRLVIVGDGPAR-----ARLE------A 244 (364)
T ss_pred cccCcccccHHHHHHhCCCCCeEEEEEeccccccCHHHHHHHHHHhhhc-CCceEEEEeCCchH-----HHHh------c
Confidence 111100 12234567999999999999999999999876 67788888876432 2222 4
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
..++|.|+| .++.+++..+++. +|++++||..|+||++++||||||+|||+++.|+..|+++++.+|++++++|.
T Consensus 245 ~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~ 319 (364)
T cd03814 245 RYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDA 319 (364)
T ss_pred cCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCH
Confidence 567899999 5667899999997 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 666 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 666 eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++++++|.+++ .|++.+++|++++++.+.
T Consensus 320 ~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~ 348 (364)
T cd03814 320 EAFAAALAALL----ADPELRRRMAARARAEAE 348 (364)
T ss_pred HHHHHHHHHHH----cCHHHHHHHHHHHHHHHh
Confidence 99999999998 899999999999998764
No 49
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.97 E-value=4e-28 Score=270.33 Aligned_cols=210 Identities=17% Similarity=0.165 Sum_probs=165.9
Q ss_pred HHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceec----CCCCccccccCCchhhhc
Q 005365 465 ADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV----SPGADMSIYFPYTEEKRR 540 (700)
Q Consensus 465 ~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vI----p~G~d~~~F~g~~~~~Kg 540 (700)
.++.+++.||.|+++|....+.+++.++.. ....+++||+++. .+... ..+....+|.|+..+.||
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~--------~~~~vi~~gvd~~--~~~~~~~~~~~~~~~il~vgr~~~~K~ 251 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSLWKRN--------TKPSIVYPPCDVE--ELLKLPLDEKTRENQILSIAQFRPEKN 251 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHHhCcC--------CCcEEEcCCCCHH--HhcccccccccCCcEEEEEEeecCCCC
Confidence 477889999999999987766554443211 2467888998842 22111 223446789999999999
Q ss_pred hhhHHHHHHHHhhcCCC-----ccEEEEecCCh-hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCc
Q 005365 541 LKSFHPEIEELLYSDVE-----NKEHLKESKDL-EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKG 614 (700)
Q Consensus 541 l~~Ll~Ai~~Ll~~~~~-----~~l~i~g~Gd~-ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aD 614 (700)
+..+++|+..+....++ .+++++|++.. ++.++.++++++++++++.++|.|+| .++.+++..+|+. +|
T Consensus 252 ~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g----~v~~~~l~~~l~~-ad 326 (419)
T cd03806 252 HPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVV----NAPFEELLEELST-AS 326 (419)
T ss_pred HHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEec----CCCHHHHHHHHHh-Ce
Confidence 99999999999876544 67788876532 22346788999999999999999999 6678999999997 99
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc-ccccc---cCCeEEEECCCCHHHHHHHHHHHHHhccCC-HHHHHHH
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIV---NGKSGYHIDPYHGEQAAEILVDFFEKCKAD-PSYWDKI 689 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~-~EiI~---dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d-p~~~~~m 689 (700)
++|+||..|+||++++||||||+|||+++.||+ .|++. +|.+|++++ |++++|++|.+++ ++ +..++.+
T Consensus 327 v~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll----~~~~~~~~~~ 400 (419)
T cd03806 327 IGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL----SLSEEERLRI 400 (419)
T ss_pred EEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH----hCCHHHHHHH
Confidence 999999999999999999999999999999886 57887 899999985 9999999999998 54 4455555
Q ss_pred HHHHHH
Q 005365 690 SLGGLK 695 (700)
Q Consensus 690 s~~ar~ 695 (700)
++++++
T Consensus 401 ~~~~~~ 406 (419)
T cd03806 401 RRAARS 406 (419)
T ss_pred HHHHHH
Confidence 444444
No 50
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.97 E-value=5.1e-28 Score=255.73 Aligned_cols=342 Identities=16% Similarity=0.200 Sum_probs=234.3
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++++... .||...++. +++++|+++||+|+ +++............. ..
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~~------~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLPS------NV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCcccccccc------ch
Confidence 6788876432 489999999 67777799999999 8876533221110000 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H 436 (700)
............ ... ..+...+.+.+... +||+||++.. ...+.+.+..+. ++|++++.|
T Consensus 52 ~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~~~~---~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLKS-----------LRD----LLAILRLRRLLRKE---KPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeeccc-----------ccc----hhHHHHHHHHHHhc---CCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 000000000000 001 11122334444443 8999999887 555555544444 899999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+............+ ..+...++.+|.+++.|....+.+.+.++. .......++||++...
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-------~~~~~~vi~~~~~~~~ 172 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKLLGI-------PPDKIEVIYNPIDIEE 172 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHhhcC-------CccccEEecCCcChhh
Confidence 87654322111000 124567899999999997776544444331 1234677888887321
Q ss_pred Ccc--e-----ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 517 PKF--N-----IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 517 ~k~--~-----vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
... . ..++.....+|.|+..+.||++.+++++..+....++..++++|.+.. .+.+.++++++++.++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~-----~~~~~~~~~~~~~~~~ 247 (353)
T cd03811 173 IRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL-----REELEALAKELGLADR 247 (353)
T ss_pred cCcccchhhhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc-----HHHHHHHHHhcCCCcc
Confidence 111 1 112334467889999999999999999999987767788888887643 2456688888999999
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 669 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLA 669 (700)
|.|+|.. +++..+++. +|++++||.+|++|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++
T Consensus 248 v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~ 320 (353)
T cd03811 248 VHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALA 320 (353)
T ss_pred EEEeccc------CCHHHHHHh-CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHH
Confidence 9999953 346778886 999999999999999999999999999999999999999999999999999999995
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 670 EILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 670 eaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
+.+..+ ..+..+++.+.++++++++.+.++
T Consensus 321 ~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~ 350 (353)
T cd03811 321 AAALAL-LDLLLDPELRERLAAAARERVARE 350 (353)
T ss_pred HHHHHH-HhccCChHHHHHHHHHHHHHHHHH
Confidence 444433 244589999999999888887653
No 51
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.97 E-value=3.6e-29 Score=283.10 Aligned_cols=271 Identities=17% Similarity=0.205 Sum_probs=208.7
Q ss_pred CCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEecCCccccCC--CCchhhhh--ccc-ccchhhhhhHHHHHHhhCCEEE
Q 005365 404 GKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWKN--LDD-KYHFSCQFTADLIAMNHTDFII 477 (700)
Q Consensus 404 ~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H~l~~~~~~--~~~~~w~~--~~~-~y~~~~~~~~E~~al~~AD~II 477 (700)
.++|+||+|.. ..++.+.+++++.|+|+|+|.|+....... .....|.. +.. ..++. ...++.+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEEE
Confidence 47899999864 456778888999999999999997432100 00000110 000 01111 123667899999999
Q ss_pred ecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-----cCCCCccccccCCchhhhchhhHHHHHHHHh
Q 005365 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-----VSPGADMSIYFPYTEEKRRLKSFHPEIEELL 552 (700)
Q Consensus 478 t~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-----Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll 552 (700)
++|....+...+ .+ .....+.+|+||++. ..+.. .++.....+|.|+..+.||++.+++|++.+.
T Consensus 250 ~~s~~~~~~~~~-~g-------~~~~ki~vIpNgid~--~~f~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 319 (475)
T cd03813 250 TLYEGNRERQIE-DG-------ADPEKIRVIPNGIDP--ERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVR 319 (475)
T ss_pred ecCHHHHHHHHH-cC-------CCHHHeEEeCCCcCH--HHcCCccccccCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 999766442211 11 112246788999984 22221 1233446789999999999999999999998
Q ss_pred hcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHH
Q 005365 553 YSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEA 632 (700)
Q Consensus 553 ~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEA 632 (700)
...++..++++|.++. ...+.++++++++++++.++|+|+| . .++..+++. +|++|+||..|+||++++||
T Consensus 320 ~~~p~~~l~IvG~g~~-~~~~~~e~~~li~~l~l~~~V~f~G----~---~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEA 390 (475)
T cd03813 320 KKIPDAEGWVIGPTDE-DPEYAEECRELVESLGLEDNVKFTG----F---QNVKEYLPK-LDVLVLTSISEGQPLVILEA 390 (475)
T ss_pred HhCCCeEEEEECCCCc-ChHHHHHHHHHHHHhCCCCeEEEcC----C---ccHHHHHHh-CCEEEeCchhhcCChHHHHH
Confidence 8888888999888752 2356788999999999999999999 2 456778886 99999999999999999999
Q ss_pred HHcCCCEEEcCCCCccccccc------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 633 MTCGLPTFATCKGGPAEIIVN------GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 633 MA~GlPVVAT~~GG~~EiI~d------g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
||||+|||+|+.||.+|++.+ |.+|++++++|++++|++|.+++ +|++.+++|+++|++++++
T Consensus 391 ma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~ 459 (475)
T cd03813 391 MAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLL----KDPELRRAMGEAGRKRVER 459 (475)
T ss_pred HHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 67999999999999999999998 8999999999999999875
No 52
>PLN02949 transferase, transferring glycosyl groups
Probab=99.96 E-value=5.6e-27 Score=263.06 Aligned_cols=216 Identities=16% Similarity=0.159 Sum_probs=169.8
Q ss_pred HHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC-cceec-CCCCccccccCCchhhhchhh
Q 005365 466 DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP-KFNIV-SPGADMSIYFPYTEEKRRLKS 543 (700)
Q Consensus 466 E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~-k~~vI-p~G~d~~~F~g~~~~~Kgl~~ 543 (700)
+....+.||.|+++|...++.+++.++. .....++++|++.... ....- +++....+|.|++.++||++.
T Consensus 214 ~~~~~~~ad~ii~nS~~t~~~l~~~~~~--------~~~i~vvyp~vd~~~~~~~~~~~~~~~~~il~vGR~~~~Kg~~l 285 (463)
T PLN02949 214 YGLVGRCAHLAMVNSSWTKSHIEALWRI--------PERIKRVYPPCDTSGLQALPLERSEDPPYIISVAQFRPEKAHAL 285 (463)
T ss_pred HHHHcCCCCEEEECCHHHHHHHHHHcCC--------CCCeEEEcCCCCHHHcccCCccccCCCCEEEEEEeeeccCCHHH
Confidence 5566799999999998776555443321 1235678888873111 11110 123345789999999999999
Q ss_pred HHHHHHHHhhc----CCCccEEEEecCCh-hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEe
Q 005365 544 FHPEIEELLYS----DVENKEHLKESKDL-EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ 618 (700)
Q Consensus 544 Ll~Ai~~Ll~~----~~~~~l~i~g~Gd~-ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~ 618 (700)
+++|+..+... .++.+++++|++.. ++.++.++++++++++++.++|+|+| .++.+++..+|+. ++++|+
T Consensus 286 lI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g----~v~~~el~~ll~~-a~~~v~ 360 (463)
T PLN02949 286 QLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHK----NVSYRDLVRLLGG-AVAGLH 360 (463)
T ss_pred HHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeC----CCCHHHHHHHHHh-CcEEEe
Confidence 99999987653 35678888887642 23356688999999999999999999 5667899999997 999999
Q ss_pred CCCCCCccHHHHHHHHcCCCEEEcCCCCcc-ccccc---CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 619 PALYEAFGLTVVEAMTCGLPTFATCKGGPA-EIIVN---GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 619 PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~-EiI~d---g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
||.+|+||++++||||||+|||+++.||+. |++.+ |.+|++++ |++++|++|.++++ .+++.+++|+++|+
T Consensus 361 ~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~---~~~~~r~~m~~~ar 435 (463)
T PLN02949 361 SMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLR---MRETERLEIAAAAR 435 (463)
T ss_pred CCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHh---CCHHHHHHHHHHHH
Confidence 999999999999999999999999999985 77765 67899985 99999999999982 36889999999999
Q ss_pred HHHHh
Q 005365 695 KRIEE 699 (700)
Q Consensus 695 ~ra~e 699 (700)
+++.+
T Consensus 436 ~~~~~ 440 (463)
T PLN02949 436 KRANR 440 (463)
T ss_pred HHHHH
Confidence 98853
No 53
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=1.6e-27 Score=264.45 Aligned_cols=333 Identities=14% Similarity=0.094 Sum_probs=207.4
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCC-CceeeccEEEeccCCCCCC-C------C
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQG-LDITPQILIITRLLPDAVG-T------T 346 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~G-heV~~~i~VvT~~~p~~~~-~------~ 346 (700)
+.|||+|++..+. |..+|+.+.++ .++..|+++| |+|+ |+.+..+.... . .
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 4699999998776 56789999999 7777889999 7999 99876543210 0 0
Q ss_pred Cccce--e-EecCccceEEEEecCCCcccccccccc--cccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCc-hHH-
Q 005365 347 CGQRL--E-KVYGTKYSDILRVPFRTEKGVVRKWIS--RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIV- 419 (700)
Q Consensus 347 ~~~~~--e-~i~~~~~v~I~rvp~~~~~~~~~~~ls--r~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~-~lv- 419 (700)
++... | .+....+-++.|+|.-.... .+...+ +..+++ ..++.+.+.+. +|||||.+.... ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~-yp~r~~~~~r~~~~-----~~~i~~~l~~~---~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKF-YPGKFSTDKRSILP-----VGDISETIPDE---EADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEeccccccc-CcccccccccccCC-----hHHHHHHHHhc---CCCEEEEcCchhhhhHH
Confidence 00000 0 00000012444544322110 000000 011111 23455566555 899999988543 443
Q ss_pred -HHHHHHhcCCcEEEEecCCccccCCCC-chhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhcccccc
Q 005365 420 -ASLLAHKLGVTQCTIAHALEKTKYPDS-DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESH 497 (700)
Q Consensus 420 -a~lla~~~giP~V~t~H~l~~~~~~~~-~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~ 497 (700)
+..++++.++ +|.++|+-.. .|... ...+.. ....++..++ ..-.++|.+++.|.... +....
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~-~~l~~~~~~~----~~r~~~d~vi~pS~~~~----~l~~~---- 197 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVK-AFLLKYINSW----VVDIYCHKVIRLSAATQ----DYPRS---- 197 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHHHhccchHH-HHHHHHHHHH----HHHHhcCEEEccCHHHH----HHhhC----
Confidence 6667777765 8889998421 11100 000000 0001111111 11234899999996432 21110
Q ss_pred ccccCCCeEEeecCCCCC--CCc---ceecCCCCc----cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCCh
Q 005365 498 TAFTLPGLYRVVHGIDVF--DPK---FNIVSPGAD----MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDL 568 (700)
Q Consensus 498 ~~~~~p~l~~v~nGId~~--~~k---~~vIp~G~d----~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ 568 (700)
....++||+.. .+. .....++.+ ..+|+||+.++||++.+++++..+....++.++.|+|.|
T Consensus 198 -------~i~~v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdG-- 268 (462)
T PLN02846 198 -------IICNVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSG-- 268 (462)
T ss_pred -------EEecCceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCC--
Confidence 12234688731 111 111112222 256999999999999999999998876667667777666
Q ss_pred hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcc
Q 005365 569 EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 648 (700)
Q Consensus 569 ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~ 648 (700)
++ .++++++++++++..++ |.|.. +.+ .+++. +|+||+||.+|+||++++||||||+|||+++.++ .
T Consensus 269 p~---~~~L~~~a~~l~l~~~v-f~G~~----~~~---~~~~~-~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~ 335 (462)
T PLN02846 269 ED---SDEVKAAAEKLELDVRV-YPGRD----HAD---PLFHD-YKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-N 335 (462)
T ss_pred cc---HHHHHHHHHhcCCcEEE-ECCCC----CHH---HHHHh-CCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-c
Confidence 33 35778888888887555 77732 233 35554 8999999999999999999999999999999998 5
Q ss_pred cccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 649 EIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 649 EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+++.++.+|+.++ |+++++++|..++
T Consensus 336 ~~v~~~~ng~~~~--~~~~~a~ai~~~l 361 (462)
T PLN02846 336 EFFKQFPNCRTYD--DGKGFVRATLKAL 361 (462)
T ss_pred ceeecCCceEecC--CHHHHHHHHHHHH
Confidence 9999999999985 8999999999998
No 54
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.96 E-value=2.1e-27 Score=256.31 Aligned_cols=318 Identities=17% Similarity=0.165 Sum_probs=211.7
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||++++... ..||.+.++. .++++|+++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997532 2489999999 66667799999999 8764311
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc--CCcEEEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL--GVTQCTI 434 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~--giP~V~t 434 (700)
. +.+.+... +||+||.|......+......+. ++|+|++
T Consensus 42 ------------~------------------------~~~~~~~~---~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ------------A------------------------LISKIEII---NADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ------------h------------------------hhhChhcc---cCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 01112222 89999998866555444444444 9999999
Q ss_pred ecCCccccCC----CCchhhhh------ccccc---chhhhhhH--HHHHHhhCCEEEecCHHHHHhhhhhhcccccccc
Q 005365 435 AHALEKTKYP----DSDIYWKN------LDDKY---HFSCQFTA--DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTA 499 (700)
Q Consensus 435 ~H~l~~~~~~----~~~~~w~~------~~~~y---~~~~~~~~--E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~ 499 (700)
.|+.+..... .....|.. ....+ .+..+... .......++.++++|....+.+++.+ .
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~~-------~ 155 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSSS-------L 155 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhcc-------c
Confidence 9987543211 00001100 00000 01111111 11122557788888866554333321 1
Q ss_pred ccCCCeEEeecCCCCCCCc-c--------eecCCCCccccccCCch--hhhchhhHHHHHHHHhhc-CCCccEEEEecCC
Q 005365 500 FTLPGLYRVVHGIDVFDPK-F--------NIVSPGADMSIYFPYTE--EKRRLKSFHPEIEELLYS-DVENKEHLKESKD 567 (700)
Q Consensus 500 ~~~p~l~~v~nGId~~~~k-~--------~vIp~G~d~~~F~g~~~--~~Kgl~~Ll~Ai~~Ll~~-~~~~~l~i~g~Gd 567 (700)
+.-..+.+++||++....+ . .-+++......|.++.. +.||+..++++++.+... .++..++++|.++
T Consensus 156 ~~~~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~ 235 (365)
T cd03825 156 FKGIPIEVIPNGIDTTIFRPRDKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASD 235 (365)
T ss_pred cCCCceEEeCCCCcccccCCCcHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCc
Confidence 2224577888898742110 0 00122222233444443 379999999999988764 3455666666553
Q ss_pred hhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc
Q 005365 568 LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 647 (700)
Q Consensus 568 ~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~ 647 (700)
... . .++..+|.|+|+..+ .+++..+++. +|++++||..|+||++++|||+||+|||+++.||.
T Consensus 236 ~~~-----~-------~~~~~~v~~~g~~~~---~~~~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~ 299 (365)
T cd03825 236 PEI-----P-------PDLPFPVHYLGSLND---DESLALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGI 299 (365)
T ss_pred hhh-----h-------ccCCCceEecCCcCC---HHHHHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCC
Confidence 321 0 145678999995442 5788899986 99999999999999999999999999999999999
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 648 AEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 648 ~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
.|++.++.+|+++++.|+++++++|.+++ +|++.+.+|++++++++.+
T Consensus 300 ~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~~ 347 (365)
T cd03825 300 PDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPDEREELGEAARELAEN 347 (365)
T ss_pred hhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998 8999999999999998764
No 55
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.96 E-value=8e-27 Score=251.24 Aligned_cols=330 Identities=18% Similarity=0.197 Sum_probs=222.0
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||++++++. ..||.+.++. +|++.|+++||+|+ |++...... .... ..
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-~~~~-------~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGESE-VKPP-------ID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCCC-ccch-------hh-
Confidence 477776542 2499999999 66777799999999 887542211 0000 00
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHh-cCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H 436 (700)
......++.... .+.++. ....+.+.+++. +||+||+|......++.++.+. .++|++++.|
T Consensus 49 -~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~---~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSKN------------PLSFLL-ALWKLRKILRQF---KPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEeccccc------------chhhHH-HHHHHHHHHHhc---CCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 011112222111 011111 112233334443 8999999987776666655544 3678999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+..... .+ ... ..+.....++.++++|....+.+.+... +....+..++||++...
T Consensus 112 ~~~~~~------~~------~~~-----~~~~~~~~~~~~~~~s~~~~~~~~~~~~-------~~~~~~~~i~ng~~~~~ 167 (360)
T cd04951 112 SKNEGG------RL------RML-----AYRLTDFLSDLTTNVSKEALDYFIASKA-------FNANKSFVVYNGIDTDR 167 (360)
T ss_pred ccCchh------HH------HHH-----HHHHHhhccCceEEEcHHHHHHHHhccC-------CCcccEEEEccccchhh
Confidence 753211 00 000 1123344578888888666543332211 22235778899987321
Q ss_pred Ccce-----------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC
Q 005365 517 PKFN-----------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK 585 (700)
Q Consensus 517 ~k~~-----------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~ 585 (700)
-... -++++....+|.|+..+.||++.+++++..+....++..++++|.|.. .+.+.+.+++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-----~~~~~~~~~~~~ 242 (360)
T cd04951 168 FRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL-----RATLERLIKALG 242 (360)
T ss_pred cCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc-----HHHHHHHHHhcC
Confidence 1000 012334457889999999999999999999987777788888886643 246777888889
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
+.++|.|+|++ +++..+++. +|++++||..|+||++++|||+||+|||+++.|+..|++++ +|+.++++|+
T Consensus 243 ~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~ 313 (360)
T cd04951 243 LSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDP 313 (360)
T ss_pred CCCcEEEeccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCH
Confidence 98999999953 457788886 99999999999999999999999999999999999999976 8999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 666 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 666 eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++++++|.++++ .+++.+..++++ ++.+.
T Consensus 314 ~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~ 342 (360)
T cd04951 314 EALANKIDEILK---MSGEERDIIGAR-RERIV 342 (360)
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHH-HHHHH
Confidence 999999999983 567777777766 65554
No 56
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.96 E-value=4.9e-27 Score=250.24 Aligned_cols=336 Identities=15% Similarity=0.149 Sum_probs=235.2
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCc
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~ 357 (700)
||+++.+... .||.++++. .|+++|.++||+|. +++...... .......
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~----~~~~~~~---- 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGE----LGEELEE---- 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchh----hhHHHHh----
Confidence 5777775442 289999999 67777799999999 887543211 1111110
Q ss_pred cceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHh-cCCcEEEEec
Q 005365 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAH 436 (700)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H 436 (700)
.++.++.++..... ..+ .+...+.+.+.+. +||+||++.......+...++. .++|++++.|
T Consensus 50 ~~i~v~~~~~~~~~----------~~~----~~~~~~~~~~~~~---~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPGR----------PDP----GALLRLYKLIRRL---RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEeccccc----------ccH----HHHHHHHHHHHhh---CCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 24556555443210 011 1122334444444 8999999877766666666665 6889999999
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+...... .|.. .. ....+....+.+|.++++|....+...+. .+.......++||++...
T Consensus 113 ~~~~~~~-----~~~~-----~~--~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--------~~~~~~~~vi~~~~~~~~ 172 (365)
T cd03807 113 HSDLDLG-----KKST-----RL--VARLRRLLSSFIPLIVANSAAAAEYHQAI--------GYPPKKIVVIPNGVDTER 172 (365)
T ss_pred CCccccc-----chhH-----hH--HHHHHHHhccccCeEEeccHHHHHHHHHc--------CCChhheeEeCCCcCHHh
Confidence 8754421 1110 00 11124456778999999997765533332 122234667888887421
Q ss_pred Cc--ce---------ecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHH-Hc
Q 005365 517 PK--FN---------IVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLID-QY 584 (700)
Q Consensus 517 ~k--~~---------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~-~l 584 (700)
.. .. -+++.....+|.|+..+.||++.+++++..+....++..++++|.+... . ....... ++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~--~---~~~~~~~~~~ 247 (365)
T cd03807 173 FSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDR--A---NLELLALKEL 247 (365)
T ss_pred cCCcccchHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcch--h---HHHHHHHHhc
Confidence 10 00 0123344567999999999999999999999877777788888776433 2 2333343 78
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCC
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 664 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D 664 (700)
++.++|.|+|.+ +++..+++. +|++++||.+|+||++++|||+||+|||+|+.||..|++.+ +|++++++|
T Consensus 248 ~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~ 318 (365)
T cd03807 248 GLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGD 318 (365)
T ss_pred CCCceEEEcccc------ccHHHHHHh-CCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCC
Confidence 889999999943 467888886 99999999999999999999999999999999999999977 899999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 665 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 665 ~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++++|.+++ +|++.+.++++++++++.+
T Consensus 319 ~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 319 PEALAEAIEALL----ADPALRQALGEAARERIEE 349 (365)
T ss_pred HHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 999999999998 8999999999999998875
No 57
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.96 E-value=1.2e-26 Score=247.17 Aligned_cols=257 Identities=23% Similarity=0.367 Sum_probs=197.6
Q ss_pred CCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 404 ~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
.+||+||+|+.. ....+..+++..++|++++.|+.......... .....++..++.+|.+++.|..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~~ 158 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSEA 158 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCHH
Confidence 489999998744 34566777788899999999987554422111 0111245678999999999977
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee----------cCCCCccccccCCchhhhchhhHHHHHHHHh
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELL 552 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll 552 (700)
..+.+++.. ..-.....+++|++. ..+.. ........+|.|+..+.||++.++++++.+.
T Consensus 159 ~~~~~~~~~--------~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 159 LADELKALG--------IDPEKVTVIPNGVDT--ERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred HHHHHHHhc--------CCCCceEEcCCCcCc--ccCCCcchHHHHhccCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 765444331 112346677788873 22211 1223445688999999999999999999998
Q ss_pred hcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHH
Q 005365 553 YSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEA 632 (700)
Q Consensus 553 ~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEA 632 (700)
...++..+++.|.+.. .+.+.+.++++++.++|.++| .++.+++..+++. ||++++||..|++|++++||
T Consensus 229 ~~~~~~~l~i~g~~~~-----~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea 298 (377)
T cd03798 229 KKRPDVHLVIVGDGPL-----REALEALAAELGLEDRVTFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEA 298 (377)
T ss_pred hcCCCeEEEEEcCCcc-----hHHHHHHHHhcCCcceEEEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHH
Confidence 7766777777776532 245677777888989999999 6667999999997 99999999999999999999
Q ss_pred HHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 633 MTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 633 MA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+++ +++.. +++.++++.+.+
T Consensus 299 ~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~--~~~~~~~~~~~~ 359 (377)
T cd03798 299 MACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL----ADPWL--RLGRAARRRVAE 359 (377)
T ss_pred HhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh----cCcHH--HHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 77775 666666666543
No 58
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=5.2e-27 Score=260.46 Aligned_cols=267 Identities=15% Similarity=0.160 Sum_probs=199.3
Q ss_pred CCCCeEEEEcCCCc-hHHHHHHHHhcCCc-EEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecC
Q 005365 403 QGKPDLIIGNYSDG-NIVASLLAHKLGVT-QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (700)
Q Consensus 403 ~~~pDlIh~h~~~~-~lva~lla~~~giP-~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S 480 (700)
..++|++|+++... +..+..+.++.+.+ +|.++|+....... ....+. ...+.+++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDR--------YPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhh--------ccccch-----HHHHHHHhcCCEEEECC
Confidence 35778999965433 34455566777766 89999976432100 001111 11234578999999999
Q ss_pred HHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccE
Q 005365 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (700)
Q Consensus 481 ~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l 560 (700)
....+.+++.++... .....+++|++...........+....+|.|++.+.||++.+++++..+....++.++
T Consensus 192 ~~~~~~l~~~~~~~~-------~ki~vi~~gv~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l 264 (407)
T cd04946 192 EQGRNYLQKRYPAYK-------EKIKVSYLGVSDPGIISKPSKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKI 264 (407)
T ss_pred HHHHHHHHHHCCCcc-------ccEEEEECCcccccccCCCCCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceE
Confidence 888776666554332 2356788898742211111123344567899999999999999999999887665554
Q ss_pred EEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCCCCCCccHHHHHHHHcCCCE
Q 005365 561 HLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPT 639 (700)
Q Consensus 561 ~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~E~fGl~vlEAMA~GlPV 639 (700)
.+...|+++. .+.+++++++.+..++|.|+| .++.+++.++++. .+|+||+||.+||+|++++||||||+||
T Consensus 265 ~~~iiG~g~~---~~~l~~~~~~~~~~~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PV 337 (407)
T cd04946 265 KWTHIGGGPL---EDTLKELAESKPENISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPV 337 (407)
T ss_pred EEEEEeCchH---HHHHHHHHHhcCCCceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCE
Confidence 4433333332 356777787888888999999 5667899999964 3789999999999999999999999999
Q ss_pred EEcCCCCcccccccCCeEEEECCC-CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 640 FATCKGGPAEIIVNGKSGYHIDPY-HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 640 VAT~~GG~~EiI~dg~~G~lv~p~-D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
|+|++||.+|+|.++.+|++++++ |+++++++|.+++ +||+.+++|+++|++++.++
T Consensus 338 Ias~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~ 395 (407)
T cd04946 338 IATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFI----DNEEEYQTMREKAREKWEEN 395 (407)
T ss_pred EeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999874 8999999999998 79999999999999998763
No 59
>PLN02275 transferase, transferring glycosyl groups
Probab=99.96 E-value=7.9e-27 Score=255.90 Aligned_cols=314 Identities=11% Similarity=-0.007 Sum_probs=200.6
Q ss_pred HHHHHHHHCCC-ceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchh---hHHHH-
Q 005365 316 EMLLRIKQQGL-DITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWP---YLETY- 390 (700)
Q Consensus 316 eLa~~L~~~Gh-eV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~---~l~~f- 390 (700)
.++.+|+++|| +|+ |+|...+. . ........+++++|+|......- + ..++. |+...
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~~---~-----~~~~~~~~~v~v~r~~~~~~~~~----~--~~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGSE---P-----IPALLNHPSIHIHLMVQPRLLQR----L--PRVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCCC---C-----CHHHhcCCcEEEEECCCcccccc----c--ccchHHHHHHHHHH
Confidence 45666788886 799 88753211 1 01111223689999975211100 1 11222 22221
Q ss_pred --HHHHHHHHHHHcCCCCeEEEEcCCCc---hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhH
Q 005365 391 --TEDVAVEIAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTA 465 (700)
Q Consensus 391 --~~~~~~~l~~~~~~~pDlIh~h~~~~---~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~ 465 (700)
...+.+.+.. ...+||+||+|.... ...+.++++..++|+|++.|+.+......+. . .....+++..+ .
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~-~--~~~~~~~~~~~--~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSL-G--RSHPLVRLYRW--Y 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhccc-C--CCCHHHHHHHH--H
Confidence 1122222211 134899999976433 3466677788899999999987421110000 0 00011122222 3
Q ss_pred HHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC-CCCcc--eecCCCC-ccccccCCchhhhch
Q 005365 466 DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV-FDPKF--NIVSPGA-DMSIYFPYTEEKRRL 541 (700)
Q Consensus 466 E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~-~~~k~--~vIp~G~-d~~~F~g~~~~~Kgl 541 (700)
|+..++.||.||++|....+.+.+.++ .+ ..+++||+.. +.+.. .-..++. ...++.|++.+.||+
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~~~g---------~~-i~vi~n~~~~~f~~~~~~~~~~~~~~~~i~~~grl~~~k~~ 228 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQNWG---------IR-ATVLYDQPPEFFRPASLEIRLRPNRPALVVSSTSWTPDEDF 228 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHhcC---------CC-eEEECCCCHHHcCcCCchhcccCCCcEEEEEeCceeccCCH
Confidence 778899999999999776654433222 12 4566777421 11100 0011111 234566999999999
Q ss_pred hhHHHHHHHHhh-----------------cCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhH
Q 005365 542 KSFHPEIEELLY-----------------SDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE 604 (700)
Q Consensus 542 ~~Ll~Ai~~Ll~-----------------~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~e 604 (700)
+.+++|+..+.. ..++..++++|.| + +.++++++++++++.+ +.|.|. .++.++
T Consensus 229 ~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G--~---~~~~l~~~~~~~~l~~-v~~~~~---~~~~~~ 299 (371)
T PLN02275 229 GILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKG--P---QKAMYEEKISRLNLRH-VAFRTM---WLEAED 299 (371)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCC--C---CHHHHHHHHHHcCCCc-eEEEcC---CCCHHH
Confidence 999999987742 2345666676665 3 2367888999999987 888662 355789
Q ss_pred HHHHHHccCcEEEeCC---CCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHH
Q 005365 605 LYRYICDTKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675 (700)
Q Consensus 605 l~~~la~~aDvfV~PS---~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~l 675 (700)
+..+|+. +|++|.|+ ..|+||++++||||||+|||+|+.||.+|+|++|.+|++++ |++++|++|.++
T Consensus 300 ~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 300 YPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred HHHHHHh-CCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 9999997 99999863 24899999999999999999999999999999999999997 799999999876
No 60
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.96 E-value=1.7e-27 Score=257.92 Aligned_cols=255 Identities=18% Similarity=0.167 Sum_probs=181.5
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCC------CchhhhhcccccchhhhhhHHHHHHhhCCEEE
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPD------SDIYWKNLDDKYHFSCQFTADLIAMNHTDFII 477 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~------~~~~w~~~~~~y~~~~~~~~E~~al~~AD~II 477 (700)
.++|+||.+..... ..+.+..++|.+..+|+.....+.. ....+......+........|..+++++|.|+
T Consensus 82 ~~~D~v~~~~~~~~---~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 158 (351)
T cd03804 82 SGYDLVISSSHAVA---KGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFI 158 (351)
T ss_pred cCCCEEEEcCcHHh---ccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 48999998654222 2222456789999888742211110 00000000000011111223667789999999
Q ss_pred ecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCC
Q 005365 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (700)
Q Consensus 478 t~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~ 557 (700)
++|...++.+++.++. ...+++||++ ...+...+...+..+|.|++.+.||++.+++++..+.
T Consensus 159 ~~S~~~~~~~~~~~~~----------~~~vi~~~~d--~~~~~~~~~~~~~il~~G~~~~~K~~~~li~a~~~~~----- 221 (351)
T cd03804 159 ANSRFVARRIKKYYGR----------DATVIYPPVD--TDRFTPAEEKEDYYLSVGRLVPYKRIDLAIEAFNKLG----- 221 (351)
T ss_pred ECCHHHHHHHHHHhCC----------CcEEECCCCC--HhhcCcCCCCCCEEEEEEcCccccChHHHHHHHHHCC-----
Confidence 9998877655443321 2356788887 3333333334456789999999999999999998762
Q ss_pred ccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC
Q 005365 558 NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 637 (700)
Q Consensus 558 ~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl 637 (700)
.+++++|.|... +.+++ +..++|+|+| .++.+++..+++. +|++|+||. |+||++++|||+||+
T Consensus 222 ~~l~ivG~g~~~-----~~l~~-----~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~ 285 (351)
T cd03804 222 KRLVVIGDGPEL-----DRLRA-----KAGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGT 285 (351)
T ss_pred CcEEEEECChhH-----HHHHh-----hcCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCC
Confidence 568888876321 22332 4568899999 6667999999997 999999999 999999999999999
Q ss_pred CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHHHHH
Q 005365 638 PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADP-SYWDKISLGGLKRIE 698 (700)
Q Consensus 638 PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp-~~~~~ms~~ar~ra~ 698 (700)
|||+|+.||..|++.++.+|++++++|++++|++|..++ +|+ ..+++++++++++..
T Consensus 286 Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~ 343 (351)
T cd03804 286 PVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFE----KNEDFDPQAIRAHAERFSE 343 (351)
T ss_pred CEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHH----hCcccCHHHHHHHHHhcCH
Confidence 999999999999999999999999999999999999998 677 667778887765543
No 61
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.96 E-value=4.8e-27 Score=260.22 Aligned_cols=236 Identities=15% Similarity=0.083 Sum_probs=156.8
Q ss_pred CCCeEEEEcCCCch---HHHH------HHHHhcCCcEEEEecCCcccc----CCCCchhhhhcc-----------cccch
Q 005365 404 GKPDLIIGNYSDGN---IVAS------LLAHKLGVTQCTIAHALEKTK----YPDSDIYWKNLD-----------DKYHF 459 (700)
Q Consensus 404 ~~pDlIh~h~~~~~---lva~------lla~~~giP~V~t~H~l~~~~----~~~~~~~w~~~~-----------~~y~~ 459 (700)
.+|||||.|...+. +... +..+..++|+|.|.|+.+... |...-..|+.-- ..+..
T Consensus 93 ~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~ 172 (405)
T PRK10125 93 PGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDR 172 (405)
T ss_pred cCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccch
Confidence 38999999886653 3111 112345799999999997542 111111222100 00011
Q ss_pred hhhh-hH----HHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCc----cee--cCCCCcc
Q 005365 460 SCQF-TA----DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK----FNI--VSPGADM 528 (700)
Q Consensus 460 ~~~~-~~----E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k----~~v--Ip~G~d~ 528 (700)
+.+. .. -..+.+.++.+|++|...++.+...++ .....+|+||||..... ... .+++...
T Consensus 173 ~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~---------~~~i~vI~NGid~~~~~~~~~~~~~~~~~~~~~ 243 (405)
T PRK10125 173 AHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYG---------PGRCRIINNGIDMATEAILAELPPVRETQGKPK 243 (405)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcC---------CCCEEEeCCCcCcccccccccccccccCCCCCE
Confidence 1000 00 112245578999999777654433222 23477899999842111 111 1233445
Q ss_pred ccccCCc--hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 529 SIYFPYT--EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 529 ~~F~g~~--~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
.+|.++. .+.||+..+++|+..+. ++..++++|.|+.. ...+|.++|+..+ ..++.
T Consensus 244 il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~~~----------------~~~~v~~~g~~~~---~~~l~ 301 (405)
T PRK10125 244 IAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFSPF----------------TAGNVVNHGFETD---KRKLM 301 (405)
T ss_pred EEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCCcc----------------cccceEEecCcCC---HHHHH
Confidence 6777873 46789999999998762 35667777765321 0246899996543 47888
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 672 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI 672 (700)
.+|+. +|+||+||.+|+||++++||||||+|||+|++||++|++.++ +|++++|+|+++||+.+
T Consensus 302 ~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~ 365 (405)
T PRK10125 302 SALNQ-MDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS 365 (405)
T ss_pred HHHHh-CCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHHHhcc
Confidence 88986 999999999999999999999999999999999999999875 99999999999999854
No 62
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.95 E-value=1.7e-26 Score=261.57 Aligned_cols=262 Identities=21% Similarity=0.215 Sum_probs=192.0
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCC--chhhhhcccccchhhhhhHHHHHHhhCCEEEecCH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS--DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~--~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~ 481 (700)
.++||+|++-......+ ++....++|.+.+.|+-........ ...|.. .|.+ -...++.+|.||++|.
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~---~y~~------~~~~~~~~D~iI~~S~ 279 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWNN---YYEY------QFSNADYIDFFITATD 279 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHH---HHHH------HHhchhhCCEEEECCH
Confidence 37999999654443333 3455568899999997543222111 111321 1111 1123677899999998
Q ss_pred HHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccE
Q 005365 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (700)
Q Consensus 482 ~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l 560 (700)
..++.+.+.++++.. ..+.++.+++|++ ...... ........+|+|++.+.||++.+++|+..+....++..+
T Consensus 280 ~~~~~l~~~~~~~~~----~~~ki~viP~g~~--~~~~~~~~~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l 353 (500)
T TIGR02918 280 IQNQILKNQFKKYYN----IEPRIYTIPVGSL--DELQYPEQERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTF 353 (500)
T ss_pred HHHHHHHHHhhhhcC----CCCcEEEEcCCCc--ccccCcccccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEE
Confidence 887777666654421 1245678888865 211111 111223568899999999999999999999888888888
Q ss_pred EEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEE
Q 005365 561 HLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTF 640 (700)
Q Consensus 561 ~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVV 640 (700)
.++|.|+ ..+.++++++++++.++|.|+|.+ ++..+++. +|+||+||.+|+||++++||||||+|||
T Consensus 354 ~i~G~G~-----~~~~l~~~i~~~~l~~~V~f~G~~-------~~~~~~~~-adv~v~pS~~Egfgl~~lEAma~G~PVI 420 (500)
T TIGR02918 354 DIYGEGG-----EKQKLQKIINENQAQDYIHLKGHR-------NLSEVYKD-YELYLSASTSEGFGLTLMEAVGSGLGMI 420 (500)
T ss_pred EEEECch-----hHHHHHHHHHHcCCCCeEEEcCCC-------CHHHHHHh-CCEEEEcCccccccHHHHHHHHhCCCEE
Confidence 8888763 236788999999999999999942 24555665 9999999999999999999999999999
Q ss_pred EcCCC-CcccccccCCeEEEECCC----C----HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 641 ATCKG-GPAEIIVNGKSGYHIDPY----H----GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 641 AT~~G-G~~EiI~dg~~G~lv~p~----D----~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|+++ |++|+|++|.+|++++++ | ++++|++|..++ + ++.+++|+++|++.+++
T Consensus 421 ~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 421 GFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIAEG 483 (500)
T ss_pred EecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHHHh
Confidence 99986 899999999999999843 3 888999999987 4 45789999999987653
No 63
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.95 E-value=2.4e-26 Score=254.01 Aligned_cols=260 Identities=13% Similarity=0.094 Sum_probs=179.3
Q ss_pred CCCeEEEEcCCCchHHHHHHH-HhcCCcEEEEecCCccccCCCCc--hhhhhcccccch--hhhhhHHHHHHhhCCEEEe
Q 005365 404 GKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYPDSD--IYWKNLDDKYHF--SCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla-~~~giP~V~t~H~l~~~~~~~~~--~~w~~~~~~y~~--~~~~~~E~~al~~AD~IIt 478 (700)
.++|+||++..... ..+. +..++|.|++.|+.+...+.... ..|. ....|+. ......|+.+++.+|.|++
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 38999999764432 2222 34589999999986432211000 0000 0001111 0111247888999999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-------cCCCCccccccCCchhhhchhhHH----HH
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-------VSPGADMSIYFPYTEEKRRLKSFH----PE 547 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-------Ip~G~d~~~F~g~~~~~Kgl~~Ll----~A 547 (700)
+|..+++.+++.... ....+.+++||+|.. .+.. .+++....+|.|++...||++.++ ++
T Consensus 179 ~S~~~~~~l~~~~~~-------~~~~v~vipngvd~~--~f~~~~~~~~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~ 249 (397)
T TIGR03087 179 VSRAEAELFRRLAPE-------AAGRITAFPNGVDAD--FFSPDRDYPNPYPPGKRVLVFTGAMDYWPNIDAVVWFAERV 249 (397)
T ss_pred cCHHHHHHHHHhCCC-------CCCCeEEeecccchh--hcCCCccccCCCCCCCcEEEEEEecCCccCHHHHHHHHHHH
Confidence 998877655433211 112467889999842 2211 122335678999999999999887 44
Q ss_pred HHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC-CCCcc
Q 005365 548 IEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFG 626 (700)
Q Consensus 548 i~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~-~E~fG 626 (700)
+..+....++..++++|.|..+ .+ ++++..++|+|+|+++ ++..+++. +|++|+||. .||+|
T Consensus 250 ~~~l~~~~p~~~l~ivG~g~~~------~~----~~l~~~~~V~~~G~v~------~~~~~~~~-adv~v~Ps~~~eG~~ 312 (397)
T TIGR03087 250 FPAVRARRPAAEFYIVGAKPSP------AV----RALAALPGVTVTGSVA------DVRPYLAH-AAVAVAPLRIARGIQ 312 (397)
T ss_pred HHHHHHHCCCcEEEEECCCChH------HH----HHhccCCCeEEeeecC------CHHHHHHh-CCEEEecccccCCcc
Confidence 5556666678888888876431 12 2334456799999553 46788886 999999997 59999
Q ss_pred HHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 627 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++++||||||+|||+|+.|+. .+...+.+|++++ +|++++|++|.+++ +|++.+++|+++|++++.+
T Consensus 313 ~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~ 379 (397)
T TIGR03087 313 NKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-ADPADFAAAILALL----ANPAEREELGQAARRRVLQ 379 (397)
T ss_pred cHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHH
Confidence 999999999999999997643 3334456799997 89999999999998 8999999999999999865
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.94 E-value=4.7e-25 Score=240.60 Aligned_cols=259 Identities=21% Similarity=0.268 Sum_probs=196.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCC-chhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS-DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~-~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
.++|+||++....... ..+......+.+.+.|+......... ...|+. .+.. ....++++|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYEY------VFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhHH------HHhChhhCCEEEEccHH
Confidence 4899999977554433 23344445677888887543221110 111211 1111 11236789999999988
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee---cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCcc
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI---VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 559 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v---Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~ 559 (700)
.++.+.+.++.. ..+.++++|++. ..+.. .+......+|.|++.+.||++.+++++..+....++..
T Consensus 168 ~~~~l~~~~~~~--------~~v~~ip~g~~~--~~~~~~~~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~ 237 (372)
T cd04949 168 QKQDLQKQFGNY--------NPIYTIPVGSID--PLKLPAQFKQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT 237 (372)
T ss_pred HHHHHHHHhCCC--------CceEEEcccccC--hhhcccchhhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE
Confidence 877665555421 126678888873 22222 23344567899999999999999999999998888899
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCE
Q 005365 560 EHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 639 (700)
Q Consensus 560 l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPV 639 (700)
++++|.|... ..+.++++++++.++|.|.|+. +++.++++. +|++|+||..|+||++++|||+||+||
T Consensus 238 l~i~G~g~~~-----~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~Pv 305 (372)
T cd04949 238 LDIYGYGDEE-----EKLKELIEELGLEDYVFLKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPV 305 (372)
T ss_pred EEEEEeCchH-----HHHHHHHHHcCCcceEEEcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCE
Confidence 9999887542 4566777889999999999943 357788886 999999999999999999999999999
Q ss_pred EEcCCC-CcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 640 FATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 640 VAT~~G-G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
|+|+.+ |+.+++.++.+|++++++|++++|++|..++ +|++.+++|+++|++.+.
T Consensus 306 I~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~ 361 (372)
T cd04949 306 ISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELL----NDPKLLQKFSEAAYENAE 361 (372)
T ss_pred EEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHH
Confidence 999987 8999999999999999999999999999998 899999999999998754
No 65
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.92 E-value=5.1e-24 Score=239.74 Aligned_cols=244 Identities=10% Similarity=0.059 Sum_probs=165.8
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCC-chHH--HHHHHHhcCCcEEEEecCCccccCCCC-chhhhhcccccchhhhhhHHHH
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSD-GNIV--ASLLAHKLGVTQCTIAHALEKTKYPDS-DIYWKNLDDKYHFSCQFTADLI 468 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~-~~lv--a~lla~~~giP~V~t~H~l~~~~~~~~-~~~w~~~~~~y~~~~~~~~E~~ 468 (700)
++.+.+... +|||||.+.+. .++. |..+|++++ |+|.++|+.... |... ...+ ...+.... .. .
T Consensus 425 dI~~~L~~f---~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Yl~~y~~g~-----L~~~llk~-l~-~ 492 (794)
T PLN02501 425 DTSQFIPSK---DADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-YIKREKNGA-----LQAFFVKH-IN-N 492 (794)
T ss_pred HHHHHhhcc---CCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-HHhHhcchh-----HHHHHHHH-HH-H
Confidence 444555544 89999997743 3556 888999999 999999986532 2110 0000 00100000 01 1
Q ss_pred HHhh--CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceec-------CCCC----ccccccCCc
Q 005365 469 AMNH--TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-------SPGA----DMSIYFPYT 535 (700)
Q Consensus 469 al~~--AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vI-------p~G~----d~~~F~g~~ 535 (700)
.+.. ||.|++.|..... +. . .....+||||. ..|..- ..|. ...+|+|++
T Consensus 493 ~v~r~hcD~VIaPS~atq~-----L~---~-------~vI~nVnGVDt--e~F~P~~r~~~~r~lgi~~~~kgiLfVGRL 555 (794)
T PLN02501 493 WVTRAYCHKVLRLSAATQD-----LP---K-------SVICNVHGVNP--KFLKIGEKVAEERELGQQAFSKGAYFLGKM 555 (794)
T ss_pred HHHHhhCCEEEcCCHHHHH-----hc---c-------cceeecccccc--cccCCcchhHHHHhcCCccccCceEEEEcc
Confidence 2222 8999999944431 11 0 11222369983 222210 0111 236899999
Q ss_pred hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcE
Q 005365 536 EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGA 615 (700)
Q Consensus 536 ~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDv 615 (700)
.++||+..+++|+..+....++..++|+|.| +. .+.++++++++++ +|.|+|.+.+ ...+|+. +|+
T Consensus 556 a~EKGld~LLeAla~L~~~~pnvrLvIVGDG--P~---reeLe~la~eLgL--~V~FLG~~dd------~~~lyas-aDV 621 (794)
T PLN02501 556 VWAKGYRELIDLLAKHKNELDGFNLDVFGNG--ED---AHEVQRAAKRLDL--NLNFLKGRDH------ADDSLHG-YKV 621 (794)
T ss_pred cccCCHHHHHHHHHHHHhhCCCeEEEEEcCC--cc---HHHHHHHHHHcCC--EEEecCCCCC------HHHHHHh-CCE
Confidence 9999999999999998776666667777655 33 3567788888887 4999995443 2356775 999
Q ss_pred EEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHH
Q 005365 616 FVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYW 686 (700)
Q Consensus 616 fV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~ 686 (700)
||+||.+|+||++++||||||+|||+|+.+|. +++.++.+|+++ +|+++++++|.+++ .|+..+
T Consensus 622 FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LL----sd~~~r 685 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEAL----ANEPQP 685 (794)
T ss_pred EEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHH----hCchhh
Confidence 99999999999999999999999999999986 447778888865 69999999999998 565543
No 66
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.91 E-value=3e-22 Score=218.04 Aligned_cols=322 Identities=14% Similarity=0.085 Sum_probs=206.2
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||+|++.. .||.+.... +|++.|.++||+|+ ++|..... .. ...+.
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~~----~~~~~--- 48 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-EA----RLVPK--- 48 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-hh----hcccc---
Confidence 898888632 278777777 67777899999999 88864311 00 01111
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H 436 (700)
.++++++++.....+. ...++.............+.+.+++. +||+||+|.+..++.+.++++..++|+|++.|
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~ik~~---~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 122 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLLKGVLQARKILKRF---KPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQ 122 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEECCCcchhHHHHHHHHcCCCEEEEcC
Confidence 2567777776432110 00000000111111122233334433 89999999877777777888889999998766
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+.... ..+++.++.+|.++++++.... + .....+.+++||++...
T Consensus 123 ~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~---~----------~~~~~i~vi~n~v~~~~ 167 (357)
T PRK00726 123 NAVPG----------------------LANKLLARFAKKVATAFPGAFP---E----------FFKPKAVVTGNPVREEI 167 (357)
T ss_pred CCCcc----------------------HHHHHHHHHhchheECchhhhh---c----------cCCCCEEEECCCCChHh
Confidence 42110 0134567789999999864321 1 22345778889987311
Q ss_pred Ccc---e---ecCCCCccccccCCchhhhchhhHH-HHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCc
Q 005365 517 PKF---N---IVSPGADMSIYFPYTEEKRRLKSFH-PEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQ 589 (700)
Q Consensus 517 ~k~---~---vIp~G~d~~~F~g~~~~~Kgl~~Ll-~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~ 589 (700)
... . .++++....+++|+....|+...++ ++++++... + ..+.++|.| +. +.+.+..+ +++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-~-~~~~~~G~g--~~----~~~~~~~~-~~~~-- 236 (357)
T PRK00726 168 LALAAPPARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPEA-L-QVIHQTGKG--DL----EEVRAAYA-AGIN-- 236 (357)
T ss_pred hcccchhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhhC-c-EEEEEcCCC--cH----HHHHHHhh-cCCc--
Confidence 000 0 1122333456778777777765555 888777532 2 223344444 32 23344444 6664
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--------cccccccCCeEEEEC
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYHID 661 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG--------~~EiI~dg~~G~lv~ 661 (700)
|.|+|++ +++..+|+. +|+++.+|- +.+++|||+||+|||++..++ ..+.+.+..+|++++
T Consensus 237 v~~~g~~------~~~~~~~~~-~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~ 305 (357)
T PRK00726 237 AEVVPFI------DDMAAAYAA-ADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIP 305 (357)
T ss_pred EEEeehH------hhHHHHHHh-CCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEE
Confidence 9999954 467888886 999999862 689999999999999997653 235677778999999
Q ss_pred CCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 662 PYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 662 p~D--~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++| +++++++|.+++ +|++.+++|++++++++.
T Consensus 306 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~~ 340 (357)
T PRK00726 306 QSDLTPEKLAEKLLELL----SDPERLEAMAEAARALGK 340 (357)
T ss_pred cccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcCC
Confidence 888 999999999998 899999999999988754
No 67
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.90 E-value=6.5e-22 Score=213.89 Aligned_cols=301 Identities=13% Similarity=0.078 Sum_probs=192.7
Q ss_pred HHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhh---HHHHHH
Q 005365 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPY---LETYTE 392 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~---l~~f~~ 392 (700)
+|+++|.++||+|+ ++|+..... .+.. ...++++++++.....+ .+.....+. ......
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~--------~~~~-~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE--------KRLV-PKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch--------hccc-ccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67788899999999 988532110 0000 11256777777643211 000111111 112223
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
.+.+.+++. +||+||+|....++.+.++++..++|+|+..++... .+ .+++..+.
T Consensus 81 ~l~~~i~~~---~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~--------~~--------------~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILKKF---KPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP--------GL--------------TNKLLSRF 135 (348)
T ss_pred HHHHHHHhc---CCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc--------cH--------------HHHHHHHH
Confidence 344444444 899999998777777777888889999854332110 00 13456778
Q ss_pred CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcc------eecCCCCccccccCCchhhhchhh-HH
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKF------NIVSPGADMSIYFPYTEEKRRLKS-FH 545 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~------~vIp~G~d~~~F~g~~~~~Kgl~~-Ll 545 (700)
+|.+++.|+...+ .+. ...++||++...... .-++++....++.|+....|++.. +.
T Consensus 136 ~d~ii~~~~~~~~----~~~------------~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~ 199 (348)
T TIGR01133 136 AKKVLISFPGAKD----HFE------------AVLVGNPVRQEIRSLPVPRERFGLREGKPTILVLGGSQGAKILNELVP 199 (348)
T ss_pred hCeeEECchhHhh----cCC------------ceEEcCCcCHHHhcccchhhhcCCCCCCeEEEEECCchhHHHHHHHHH
Confidence 9999999965543 111 245677775211000 012333445667877766777654 45
Q ss_pred HHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCc
Q 005365 546 PEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 625 (700)
Q Consensus 546 ~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~f 625 (700)
++++.+... +..++ ...|+++. +.+++.++++++.+.+.|.. .++..+|+. +|++|.+| +
T Consensus 200 ~a~~~l~~~--~~~~~-~~~g~~~~----~~l~~~~~~~~l~~~v~~~~--------~~~~~~l~~-ad~~v~~~---g- 259 (348)
T TIGR01133 200 KALAKLAEK--GIQIV-HQTGKNDL----EKVKNVYQELGIEAIVTFID--------ENMAAAYAA-ADLVISRA---G- 259 (348)
T ss_pred HHHHHHhhc--CcEEE-EECCcchH----HHHHHHHhhCCceEEecCcc--------cCHHHHHHh-CCEEEECC---C-
Confidence 777776542 34443 34444422 46677777787766555652 156778886 99999875 2
Q ss_pred cHHHHHHHHcCCCEEEcCCCC-------cccccccCCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 626 GLTVVEAMTCGLPTFATCKGG-------PAEIIVNGKSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 626 Gl~vlEAMA~GlPVVAT~~GG-------~~EiI~dg~~G~lv~p~D--~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
|++++|||+||+|+|+++.+| ..+++.++.+|++++++| +++++++|.+++ +||+.+++|+++++++
T Consensus 260 ~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~ 335 (348)
T TIGR01133 260 ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKL 335 (348)
T ss_pred hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhc
Confidence 789999999999999998754 235788899999999876 999999999998 8999999999999987
Q ss_pred HHh
Q 005365 697 IEE 699 (700)
Q Consensus 697 a~e 699 (700)
+.+
T Consensus 336 ~~~ 338 (348)
T TIGR01133 336 AKP 338 (348)
T ss_pred CCc
Confidence 653
No 68
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.90 E-value=1.7e-21 Score=216.83 Aligned_cols=384 Identities=16% Similarity=0.164 Sum_probs=243.9
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe--
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV-- 354 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i-- 354 (700)
|||+.+|...+|- -++||..-.+- .|.++|++.|++|+ |+.+.++ .....+....+.+
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~-~~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYP-KVQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCch-hhhhhhccccceeeE
Confidence 7899999887753 47899888888 55666799999999 9888776 3222222211110
Q ss_pred ----c-CccceEEEEecC-CC-ccc-cc--cccccc--------ccchhhHHHHHHHHHHHHHHHcC--CCCeEEEEcCC
Q 005365 355 ----Y-GTKYSDILRVPF-RT-EKG-VV--RKWISR--------FEVWPYLETYTEDVAVEIAKELQ--GKPDLIIGNYS 414 (700)
Q Consensus 355 ----~-~~~~v~I~rvp~-~~-~~~-~~--~~~lsr--------~~i~~~l~~f~~~~~~~l~~~~~--~~pDlIh~h~~ 414 (700)
. +.....+..... .. ... ++ ....+| .+-.-.+..|...+...+.. .. ..|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~-~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPL-GLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhh-cCCCCCCCEEEeecH
Confidence 0 000011111111 00 000 00 111222 11112233333333333212 12 36999999999
Q ss_pred CchHHHHHHHHh----cCCcEEEEecCCccccCCC-Cchhhhhcc-cccc-----hhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 415 DGNIVASLLAHK----LGVTQCTIAHALEKTKYPD-SDIYWKNLD-DKYH-----FSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 415 ~~~lva~lla~~----~giP~V~t~H~l~~~~~~~-~~~~w~~~~-~~y~-----~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
..+++..+++.. ..+|.|+|+|++....... ....|..+. ..|. +..+...++..+..||.|.++|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999999884 4789999999985543221 111111111 0111 1122334667788999999999988
Q ss_pred HHhhhhhhcccc----ccccccCCCeEEeecCCCCC--CCc-c---------eec----------------C--CCCccc
Q 005365 484 IAGSKDTVGQYE----SHTAFTLPGLYRVVHGIDVF--DPK-F---------NIV----------------S--PGADMS 529 (700)
Q Consensus 484 ~~~~k~~~~~y~----~~~~~~~p~l~~v~nGId~~--~~k-~---------~vI----------------p--~G~d~~ 529 (700)
+..+. ...|. +......-.+.-|.||+|.. .++ - ... + ......
T Consensus 220 a~Ei~--t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~ 297 (487)
T COG0297 220 AGEIY--TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLF 297 (487)
T ss_pred HHhhc--cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEE
Confidence 76544 12221 00000113467788999842 110 0 011 1 112234
Q ss_pred cccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHH
Q 005365 530 IYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 609 (700)
Q Consensus 530 ~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~l 609 (700)
.+.+|+..+||++.+++++..++... .++++.|.||.. ....+..+++.+.. ++...- .. ++.+...+
T Consensus 298 ~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~~---le~~~~~la~~~~~--~~~~~i----~~-~~~la~~i 365 (487)
T COG0297 298 GFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDPE---LEEALRALASRHPG--RVLVVI----GY-DEPLAHLI 365 (487)
T ss_pred EEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcHH---HHHHHHHHHHhcCc--eEEEEe----ee-cHHHHHHH
Confidence 56789999999999999999999765 778999999653 44667777776654 444443 11 34566666
Q ss_pred HccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc--------CCeEEEECCCCHHHHHHHHHHHHHhccC
Q 005365 610 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--------GKSGYHIDPYHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 610 a~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--------g~~G~lv~p~D~eaLAeaI~~ll~~~~~ 681 (700)
...+|++++||++|+||++-++||..|+++|++.+||.++.|.+ ..+||++.+.++++++.+|...+.-...
T Consensus 366 ~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~ 445 (487)
T COG0297 366 YAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRA 445 (487)
T ss_pred HhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhC
Confidence 55799999999999999999999999999999999999999986 4799999999999999999998866666
Q ss_pred CHHHHHHHHHHHHH
Q 005365 682 DPSYWDKISLGGLK 695 (700)
Q Consensus 682 dp~~~~~ms~~ar~ 695 (700)
++..|+.+..++..
T Consensus 446 ~~~~w~~~~~~~m~ 459 (487)
T COG0297 446 PPLLWRKVQPNAMG 459 (487)
T ss_pred CHHHHHHHHHhhcc
Confidence 67769998888763
No 69
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.90 E-value=1.6e-21 Score=211.00 Aligned_cols=312 Identities=14% Similarity=0.124 Sum_probs=200.3
Q ss_pred CcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCccc--ccc
Q 005365 298 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKG--VVR 375 (700)
Q Consensus 298 ~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~--~~~ 375 (700)
.+||.+.++. +|++.|.++||+|+ |+|...... .+... ..++++.++|+....+ .++
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~ 66 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLVP-KAGIPLHTIPVGGLRRKGSLK 66 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhccc-ccCCceEEEEecCcCCCChHH
Confidence 3588888777 67777899999999 988653211 01111 1246778887653211 111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhccc
Q 005365 376 KWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDD 455 (700)
Q Consensus 376 ~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~ 455 (700)
.+. ..+.. ......+.+.+++. +||+||+|....++.+.++++..++|+++..|+....
T Consensus 67 ~~~---~~~~~-~~~~~~~~~~i~~~---~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~-------------- 125 (350)
T cd03785 67 KLK---APFKL-LKGVLQARKILKKF---KPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPG-------------- 125 (350)
T ss_pred HHH---HHHHH-HHHHHHHHHHHHhc---CCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCcc--------------
Confidence 000 00111 11122233444443 8999999887767777788888999998765542110
Q ss_pred ccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce--------ecCCCCc
Q 005365 456 KYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN--------IVSPGAD 527 (700)
Q Consensus 456 ~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~--------vIp~G~d 527 (700)
+ .++..++.+|.|++.|+...+. +....+..++||++. ..+. .+++...
T Consensus 126 ---~-----~~~~~~~~~~~vi~~s~~~~~~-------------~~~~~~~~i~n~v~~--~~~~~~~~~~~~~~~~~~~ 182 (350)
T cd03785 126 ---L-----ANRLLARFADRVALSFPETAKY-------------FPKDKAVVTGNPVRE--EILALDRERARLGLRPGKP 182 (350)
T ss_pred ---H-----HHHHHHHhhCEEEEcchhhhhc-------------CCCCcEEEECCCCch--HHhhhhhhHHhcCCCCCCe
Confidence 0 1334567799999999765431 111346677888863 1111 1233333
Q ss_pred cccccCCchhhhchhh-HHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 528 MSIYFPYTEEKRRLKS-FHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~-Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
..++.++....|+... +.++++.+.. ++..++ ...|+++ .+++.+.++++ .++|.|.|++ +++.
T Consensus 183 ~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~-~i~G~g~----~~~l~~~~~~~--~~~v~~~g~~------~~~~ 247 (350)
T cd03785 183 TLLVFGGSQGARAINEAVPEALAELLR--KRLQVI-HQTGKGD----LEEVKKAYEEL--GVNYEVFPFI------DDMA 247 (350)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEE-EEcCCcc----HHHHHHHHhcc--CCCeEEeehh------hhHH
Confidence 4556666556666654 4477776652 233322 2233332 14455666655 4689999954 4678
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--------cccccccCCeEEEECCC--CHHHHHHHHHHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYHIDPY--HGEQAAEILVDFF 676 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG--------~~EiI~dg~~G~lv~p~--D~eaLAeaI~~ll 676 (700)
.+|+. +|++|.+|- +++++|||+||+|||+++.++ ..+.+.++.+|++++++ |+++++++|.+++
T Consensus 248 ~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll 322 (350)
T cd03785 248 AAYAA-ADLVISRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL 322 (350)
T ss_pred HHHHh-cCEEEECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 88886 999998762 689999999999999987654 34667777899999987 8999999999998
Q ss_pred HhccCCHHHHHHHHHHHHHHHH
Q 005365 677 EKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 677 ~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
.|++.+++|+++|++++.
T Consensus 323 ----~~~~~~~~~~~~~~~~~~ 340 (350)
T cd03785 323 ----SDPERLKAMAEAARSLAR 340 (350)
T ss_pred ----cCHHHHHHHHHHHHhcCC
Confidence 899999999999998764
No 70
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.89 E-value=7.5e-22 Score=220.54 Aligned_cols=275 Identities=17% Similarity=0.159 Sum_probs=175.9
Q ss_pred CCCCeEEEEcCCCchHHHHHHH-HhcCCcEEEEecCCccccCCCCc---hh-------hhhcccccchhhhhhHHHHHHh
Q 005365 403 QGKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYPDSD---IY-------WKNLDDKYHFSCQFTADLIAMN 471 (700)
Q Consensus 403 ~~~pDlIh~h~~~~~lva~lla-~~~giP~V~t~H~l~~~~~~~~~---~~-------w~~~~~~y~~~~~~~~E~~al~ 471 (700)
..++||+|+|.|..+..+..+. +..++|.|+|.|+.....+...+ .+ |.+-.....+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 3579999999999999888888 55789999999988766642111 11 1111122333444556999999
Q ss_pred hCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecC------------------------CCC-
Q 005365 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS------------------------PGA- 526 (700)
Q Consensus 472 ~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp------------------------~G~- 526 (700)
.||.++|+|......++..++.. |+. +++||+++ .+|.-.. -+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll~~~--------pd~-ViPNGid~--~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~ 294 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLLKRK--------PDV-VLPNGLNV--KKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFD 294 (590)
T ss_pred hCCEEEECChHHHHHHHHHhCCC--------CCE-EeCCCcch--hhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCC
Confidence 99999999998888777776632 233 89999984 2221111 122
Q ss_pred --cccc-c-cCCchh-hhchhhHHHHHHHHhhc----CCCccEE---EEecCCh---h----hHHHHHHHH---------
Q 005365 527 --DMSI-Y-FPYTEE-KRRLKSFHPEIEELLYS----DVENKEH---LKESKDL---E----EQAEMKKMY--------- 578 (700)
Q Consensus 527 --d~~~-F-~g~~~~-~Kgl~~Ll~Ai~~Ll~~----~~~~~l~---i~g~Gd~---e----e~~~~~~l~--------- 578 (700)
++.+ | .||.+. .||++.+++|+..+-.. ..+..++ ++-++.. . ..+-.++++
T Consensus 295 ~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~ 374 (590)
T cd03793 295 LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEK 374 (590)
T ss_pred CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHH
Confidence 2333 4 599988 99999999999887662 2222222 1111100 0 001011111
Q ss_pred ----------------------------------------------------------HHHHHcCCC----Cc--EEEec
Q 005365 579 ----------------------------------------------------------SLIDQYKLN----GQ--FRWIS 594 (700)
Q Consensus 579 ----------------------------------------------------------~li~~l~L~----~~--V~flG 594 (700)
..+.+.+|. ++ |.|++
T Consensus 375 i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P 454 (590)
T cd03793 375 IGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHP 454 (590)
T ss_pred hhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcc
Confidence 112222232 22 44444
Q ss_pred c---ccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc----ccccccC-CeEEEEC-----
Q 005365 595 S---QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEIIVNG-KSGYHID----- 661 (700)
Q Consensus 595 ~---~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~----~EiI~dg-~~G~lv~----- 661 (700)
. ..|.+-..+.+++++. ||+||+||++|+||++++||||||+|||+|+.+|+ .|++.++ ..|+++.
T Consensus 455 ~~L~~~~~~~g~~y~E~~~g-~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~ 533 (590)
T cd03793 455 EFLSSTNPLLGLDYEEFVRG-CHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFK 533 (590)
T ss_pred cccCCCCCcCCcchHHHhhh-ceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCcc
Confidence 1 1123334457777775 99999999999999999999999999999999999 5666555 3677776
Q ss_pred --CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 662 --PYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 662 --p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
+.++++++++|.+++ . .+.++.+.++++
T Consensus 534 ~~~e~v~~La~~m~~~~----~-~~~r~~~~~r~~ 563 (590)
T cd03793 534 SPDESVQQLTQYMYEFC----Q-LSRRQRIIQRNR 563 (590)
T ss_pred chHHHHHHHHHHHHHHh----C-CcHHHHHHHHHH
Confidence 345677777777765 3 356666666655
No 71
>PHA01630 putative group 1 glycosyl transferase
Probab=99.89 E-value=5.1e-22 Score=214.23 Aligned_cols=234 Identities=16% Similarity=0.147 Sum_probs=160.7
Q ss_pred EcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHH-HhhCCEEEecCHHHHHhhhh
Q 005365 411 GNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA-MNHTDFIITSTFQEIAGSKD 489 (700)
Q Consensus 411 ~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~a-l~~AD~IIt~S~~~~~~~k~ 489 (700)
.|+....+.++...++.|+|+++++|+... +... .+... .+.+|.||++|....+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~------------------l~~~--~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA------------------ISHT--ALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech------------------hhHH--HHHHHhhccCCEEEECCHHHHHHHHH
Confidence 555555555666666778999999998211 1111 13345 67899999999776654332
Q ss_pred hhcccccccccc-CCCeEEeecCCCCCCCcceecC---CCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEec
Q 005365 490 TVGQYESHTAFT-LPGLYRVVHGIDVFDPKFNIVS---PGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKES 565 (700)
Q Consensus 490 ~~~~y~~~~~~~-~p~l~~v~nGId~~~~k~~vIp---~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~ 565 (700)
. .+. ...+.+|+||+|. +.+...+ .+.....|.++..+.||++.+++|++.+....++..++++|.
T Consensus 112 ~--------g~~~~~~i~vIpNGVd~--~~f~~~~~~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~ 181 (331)
T PHA01630 112 S--------GLKIPQPIYVIPHNLNP--RMFEYKPKEKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSS 181 (331)
T ss_pred c--------CCCCCCCEEEECCCCCH--HHcCCCccccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeC
Confidence 2 111 1246788999983 2222111 111123355677899999999999999987766777777774
Q ss_pred CChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC
Q 005365 566 KDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG 645 (700)
Q Consensus 566 Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G 645 (700)
+..+ ..+ .++.+ +.| .++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.|
T Consensus 182 ~~~~-----~~l------~~~~~---~~~----~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~g 242 (331)
T PHA01630 182 NMLD-----PRL------FGLNG---VKT----PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKG 242 (331)
T ss_pred cccc-----hhh------ccccc---eec----cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCC
Confidence 3211 111 12222 234 4667999999997 999999999999999999999999999999999
Q ss_pred CcccccccCCeEEEECC-------------------CCHHHHHHHHHHHHHhccCC---HHHHHHHHHHHHHHH
Q 005365 646 GPAEIIVNGKSGYHIDP-------------------YHGEQAAEILVDFFEKCKAD---PSYWDKISLGGLKRI 697 (700)
Q Consensus 646 G~~EiI~dg~~G~lv~p-------------------~D~eaLAeaI~~ll~~~~~d---p~~~~~ms~~ar~ra 697 (700)
|..|++.++.+|+++++ .|.+++++++.+++ .| ++.++.++.+++...
T Consensus 243 g~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~ 312 (331)
T PHA01630 243 AWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYR 312 (331)
T ss_pred CchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHH
Confidence 99999999988887753 27788888888887 44 345555555554443
No 72
>PHA01633 putative glycosyl transferase group 1
Probab=99.88 E-value=2.5e-20 Score=199.84 Aligned_cols=221 Identities=14% Similarity=0.108 Sum_probs=152.7
Q ss_pred CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEE
Q 005365 428 GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYR 507 (700)
Q Consensus 428 giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~ 507 (700)
+.|+++|+|+..... .| ...|.+.+.+|++|...++.+++. + +.. . ..
T Consensus 70 ~~~~~tt~~g~~~~~-------------~y---------~~~m~~~~~vIavS~~t~~~L~~~-G-------~~~-~-i~ 117 (335)
T PHA01633 70 KKYFYTTCDGIPNIE-------------IV---------NKYLLQDVKFIPNSKFSAENLQEV-G-------LQV-D-LP 117 (335)
T ss_pred CCceEEeeCCcCchH-------------HH---------HHHHhcCCEEEeCCHHHHHHHHHh-C-------CCC-c-ee
Confidence 468899999864210 11 123556779999997776544432 1 111 1 34
Q ss_pred eecCCCCC--CCcc----------eecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc--cEEEEecCChhhHHH
Q 005365 508 VVHGIDVF--DPKF----------NIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN--KEHLKESKDLEEQAE 573 (700)
Q Consensus 508 v~nGId~~--~~k~----------~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~--~l~i~g~Gd~ee~~~ 573 (700)
+++|+|.. .+.- ....+.....+|+|++.++||++.+++|++.+....++. ++++.+.|+.
T Consensus 118 I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~----- 192 (335)
T PHA01633 118 VFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK----- 192 (335)
T ss_pred eeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH-----
Confidence 77899842 1110 000022234567899999999999999999998766543 2344444421
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc
Q 005365 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 653 (700)
Q Consensus 574 ~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d 653 (700)
..+++++.++|+|+|+.. .++.+++.++|+. +|+||+||.+|+||++++||||||+|||+|+.||+.|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 134567888999996432 4556899999997 99999999999999999999999999999999999997542
Q ss_pred ------------------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 654 ------------------GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 654 ------------------g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
..+||.+++.|++++|++|..+++. .|++.+ +.+++++++
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~~---~~~~~~~a~ 322 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREER---SMKLKELAK 322 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhhh---hHHHHHHHH
Confidence 2257889999999999999998631 344333 555555554
No 73
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.87 E-value=1.3e-20 Score=210.33 Aligned_cols=261 Identities=14% Similarity=0.079 Sum_probs=171.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
+||+||.+...........+++.|+|++++.|.+... +...|.. ..+ ..+..++.+|.|++.|...+
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~-------~~~--~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQK-------FKR--FYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHH-------HHH--HHHHHHHhCCEEEECCHHHH
Confidence 8999998754432223344677899999876644211 1112211 111 24567889999999997776
Q ss_pred HhhhhhhccccccccccCCC-eEEeecC-CCCCCCcce------e---cCCCCccccccCCchhhhchhhHHHHHHHHhh
Q 005365 485 AGSKDTVGQYESHTAFTLPG-LYRVVHG-IDVFDPKFN------I---VSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 553 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~-l~~v~nG-Id~~~~k~~------v---Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~ 553 (700)
+.+.+. + .+. +.++.|. ++.+..... . ..++....+|.+. ..|+...+++|+..+..
T Consensus 191 ~~l~~~-g---------~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~~~~~~~vil~~~~--~~~~~~~ll~A~~~l~~ 258 (425)
T PRK05749 191 ERFLAL-G---------AKNEVTVTGNLKFDIEVPPELAARAATLRRQLAPNRPVWIAAST--HEGEEELVLDAHRALLK 258 (425)
T ss_pred HHHHHc-C---------CCCCcEecccccccCCCChhhHHHHHHHHHHhcCCCcEEEEeCC--CchHHHHHHHHHHHHHH
Confidence 543321 1 111 3333442 221111000 0 0022233445554 35778889999999887
Q ss_pred cCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCc--------CChhHHHHHHHccCcEEEe-CCCCCC
Q 005365 554 SDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR--------VRNGELYRYICDTKGAFVQ-PALYEA 624 (700)
Q Consensus 554 ~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~--------v~~~el~~~la~~aDvfV~-PS~~E~ 624 (700)
..++..++++|.| ++. .+++.++++++|+.. +.|.|..... -..+++..+|+. +|++++ +|..|+
T Consensus 259 ~~~~~~liivG~g--~~r--~~~l~~~~~~~gl~~-~~~~~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~ 332 (425)
T PRK05749 259 QFPNLLLILVPRH--PER--FKEVEELLKKAGLSY-VRRSQGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKR 332 (425)
T ss_pred hCCCcEEEEcCCC--hhh--HHHHHHHHHhCCCcE-EEccCCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCC
Confidence 6677666666544 321 256788888888863 5555521100 024689999996 999554 788899
Q ss_pred ccHHHHHHHHcCCCEEEcCC-CCcccccccC-CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 625 FGLTVVEAMTCGLPTFATCK-GGPAEIIVNG-KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 625 fGl~vlEAMA~GlPVVAT~~-GG~~EiI~dg-~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
+|.+++|||+||+|||+++. ++..|+++.. .+|++++++|+++++++|..++ +||+.+++|+++|++++.++
T Consensus 333 ~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 333 GGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred CCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999864 6677776553 4688888999999999999998 89999999999999998753
No 74
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.86 E-value=3.3e-21 Score=187.29 Aligned_cols=159 Identities=24% Similarity=0.421 Sum_probs=138.8
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhhc-CCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCCh
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLYS-DVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRN 602 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~-~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~ 602 (700)
......+|+|+..+.||++.+++++..+... .++..++++|.++ +...+...++.+++.++|+|+| .++.
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~i~~~~----~~~~ 83 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE-----YKKELKNLIEKLNLKENIIFLG----YVPD 83 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC-----HHHHHHHHHHHTTCGTTEEEEE----SHSH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc-----cccccccccccccccccccccc----cccc
Confidence 3444568899999999999999999998864 5677788887443 3356788889999999999999 5556
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|..++ .|
T Consensus 84 ~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~l----~~ 158 (172)
T PF00534_consen 84 DELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEKLL----ND 158 (172)
T ss_dssp HHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHHHH----HH
T ss_pred ccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHHHH----CC
Confidence 899999997 9999999999999999999999999999999999999999999999999999999999999999 79
Q ss_pred HHHHHHHHHHHHHH
Q 005365 683 PSYWDKISLGGLKR 696 (700)
Q Consensus 683 p~~~~~ms~~ar~r 696 (700)
++.++.|+++|++|
T Consensus 159 ~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 159 PELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999986
No 75
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.86 E-value=2.5e-20 Score=209.93 Aligned_cols=271 Identities=13% Similarity=0.047 Sum_probs=185.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
+.|+|+.|.+...+++..+.++. +.|+++..|..++.. . .|..+. +...-...+-.+|.|...+...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~----e-~~~~lp-------~~~~ll~~~l~~D~igF~t~~~ 198 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSS----E-IFRCLP-------WREELLRGLLGADLIGFQTERY 198 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCCh----H-HHhhCC-------ChHHHHHHHhcCCEEEECCHHH
Confidence 57999999988777777776543 579999999765332 1 122111 1001123466699999998665
Q ss_pred HHhhhhhhccc--ccc---ccc---c-CCCeEEeecCCCCCCCcce----------------ecCCCCccccccCCchhh
Q 005365 484 IAGSKDTVGQY--ESH---TAF---T-LPGLYRVVHGIDVFDPKFN----------------IVSPGADMSIYFPYTEEK 538 (700)
Q Consensus 484 ~~~~k~~~~~y--~~~---~~~---~-~p~l~~v~nGId~~~~k~~----------------vIp~G~d~~~F~g~~~~~ 538 (700)
...+.+..... .+. ... . ...+..+++|||. ..+. -..++....+|.+++.+.
T Consensus 199 ~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~ 276 (460)
T cd03788 199 ARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDP--DAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYS 276 (460)
T ss_pred HHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcH--HHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCcccc
Confidence 44332221110 000 000 0 0135677889973 2211 112344567889999999
Q ss_pred hchhhHHHHHHHHhhcCCC----ccEEEEecC---Chhh-HHHHHHHHHHHHHcCCC------CcEEEeccccCcCChhH
Q 005365 539 RRLKSFHPEIEELLYSDVE----NKEHLKESK---DLEE-QAEMKKMYSLIDQYKLN------GQFRWISSQMNRVRNGE 604 (700)
Q Consensus 539 Kgl~~Ll~Ai~~Ll~~~~~----~~l~i~g~G---d~ee-~~~~~~l~~li~~l~L~------~~V~flG~~~d~v~~~e 604 (700)
||+..+++|++.++...++ ..++++|.+ ++++ ....+++.+++++++.. ..|.+++ ..++.++
T Consensus 277 Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~---g~v~~~e 353 (460)
T cd03788 277 KGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLY---RSLPREE 353 (460)
T ss_pred CCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEe---CCCCHHH
Confidence 9999999999999887765 345556543 3332 23345555665554321 2355553 1567899
Q ss_pred HHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC----EEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhcc
Q 005365 605 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCK 680 (700)
Q Consensus 605 l~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP----VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~ 680 (700)
+..+|+. ||+||+||..|+||++++||||||+| ||+|+.+|..+. +.+|++++|.|++++|++|.++++
T Consensus 354 l~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~l~--- 426 (460)
T cd03788 354 LAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRALT--- 426 (460)
T ss_pred HHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHHHc---
Confidence 9999996 99999999999999999999999999 999998888887 468999999999999999999982
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 005365 681 ADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 681 ~dp~~~~~ms~~ar~ra~e 699 (700)
.+++.++.+++++++++.+
T Consensus 427 ~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 427 MPLEERRERHRKLREYVRT 445 (460)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 4568889999999988764
No 76
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.85 E-value=1.5e-19 Score=202.75 Aligned_cols=281 Identities=12% Similarity=0.078 Sum_probs=187.4
Q ss_pred HHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 394 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
++..+.+.. ..-|+|+.|.+.-.+++..+.++. ..++.+..|..++.. . .| +...+...-...|-.
T Consensus 117 fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~----e-~f-------~~lp~r~~il~gll~ 183 (456)
T TIGR02400 117 FAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSS----E-IY-------RTLPWRRELLEGLLA 183 (456)
T ss_pred HHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCCh----H-HH-------hhCCcHHHHHHHHhc
Confidence 333444432 245899999999888888887664 357778888654332 1 11 111111112346888
Q ss_pred CCEEEecCHHHHHhhhhhhccccc----cccc----cCCCeEEeecCCCCCCCcceec----------------CCCCcc
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYES----HTAF----TLPGLYRVVHGIDVFDPKFNIV----------------SPGADM 528 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~----~~~~----~~p~l~~v~nGId~~~~k~~vI----------------p~G~d~ 528 (700)
||.|-..|+...+.+.......-. .... ..-.+..+++|||. ..|.-. -.+...
T Consensus 184 ~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~--~~f~~~~~~~~~~~~~~~lr~~~~~~~v 261 (456)
T TIGR02400 184 YDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDV--DRFAEQAKKPSVQKRIAELRESLKGRKL 261 (456)
T ss_pred CCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCH--HHHHHHhcChhHHHHHHHHHHHcCCCeE
Confidence 999999999887655443321100 0000 01124456677763 222100 012335
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCc----cEEEEecCChhhHHHHHHHHHHHHHc----CC-CC-----cEEEec
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVEN----KEHLKESKDLEEQAEMKKMYSLIDQY----KL-NG-----QFRWIS 594 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~----~l~i~g~Gd~ee~~~~~~l~~li~~l----~L-~~-----~V~flG 594 (700)
.++++|+.+.||+..+++|++.++...|+. .+++++++.....++.+++++.++++ +. .+ .|.+++
T Consensus 262 Il~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~ 341 (456)
T TIGR02400 262 IIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLN 341 (456)
T ss_pred EEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEc
Confidence 678889999999999999999998877653 24444432211112233444444433 11 11 145554
Q ss_pred cccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC----EEEcCCCCcccccccCCeEEEECCCCHHHHHH
Q 005365 595 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 670 (700)
Q Consensus 595 ~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP----VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAe 670 (700)
..++.+++..+|+. +|+||+||..||||++++||||||+| +|+|+.+|..+.+. +|++++|.|++++|+
T Consensus 342 ---~~~~~~el~aly~a-aDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~ 414 (456)
T TIGR02400 342 ---RSYDREELMALYRA-ADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMAD 414 (456)
T ss_pred ---CCCCHHHHHHHHHh-CcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHH
Confidence 25668999999996 99999999999999999999999999 99999999888883 799999999999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 671 ILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 671 aI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+|.++++ .+++.++++.+++++++.+
T Consensus 415 aI~~aL~---~~~~er~~r~~~~~~~v~~ 440 (456)
T TIGR02400 415 AIARALT---MPLEEREERHRAMMDKLRK 440 (456)
T ss_pred HHHHHHc---CCHHHHHHHHHHHHHHHhh
Confidence 9999983 5788999999999998765
No 77
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.85 E-value=7.1e-20 Score=182.98 Aligned_cols=121 Identities=27% Similarity=0.417 Sum_probs=99.4
Q ss_pred ccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH
Q 005365 531 YFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610 (700)
Q Consensus 531 F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la 610 (700)
|.|+..+.||++.+++++..+....++..+.++|.+.... ...+.+.+.+..++|.++|.. +..+....+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~-----~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~ 179 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPERE-----YLEELLAALLLLDRVIFLGGL----DPEELLALLL 179 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChH-----HHHHHHHhcCCcccEEEeCCC----CcHHHHHHHh
Confidence 8889999999999999999998777788888888775432 223335667788899999943 2334444444
Q ss_pred ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEE
Q 005365 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI 660 (700)
Q Consensus 611 ~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv 660 (700)
+.+|++++||..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 180 ~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 180 AAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred hcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 35999999999999999999999999999999999999999999999875
No 78
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.79 E-value=1.1e-17 Score=198.66 Aligned_cols=276 Identities=12% Similarity=0.103 Sum_probs=189.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+.-.+++..+.++ ...++.+-.|..++..-. |+...+...-...|-.||.|-..|...
T Consensus 147 ~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~------------fr~lp~r~~il~gll~aDligF~t~~y 214 (797)
T PLN03063 147 EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEI------------YKTLPSRSELLRAVLTADLIGFHTYDF 214 (797)
T ss_pred CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHH------------HhhCCCHHHHHHHHhcCCEEEeCCHHH
Confidence 3489999998888888877765 356888888876544311 111111111234677899999999876
Q ss_pred HHhhhhhhccc---c-cccccc----CCCeEEeecCCCCCCCccee----------------cCCCCccccccCCchhhh
Q 005365 484 IAGSKDTVGQY---E-SHTAFT----LPGLYRVVHGIDVFDPKFNI----------------VSPGADMSIYFPYTEEKR 539 (700)
Q Consensus 484 ~~~~k~~~~~y---~-~~~~~~----~p~l~~v~nGId~~~~k~~v----------------Ip~G~d~~~F~g~~~~~K 539 (700)
..-+.+..... + ...... ...+..+++||+. ..+.. ...+....++++++.+.|
T Consensus 215 ~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~--~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~K 292 (797)
T PLN03063 215 ARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDP--ERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIK 292 (797)
T ss_pred HHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCH--HHHHHHhcChhHHHHHHHHHHhcCCCeEEEEeccccccc
Confidence 65443322111 0 000010 1235577888873 22210 123445677899999999
Q ss_pred chhhHHHHHHHHhhcCCCcc--EEEE--ecCChhhHHHHHHHHHHHHHcC--CCC---cEEEec--cccCcCChhHHHHH
Q 005365 540 RLKSFHPEIEELLYSDVENK--EHLK--ESKDLEEQAEMKKMYSLIDQYK--LNG---QFRWIS--SQMNRVRNGELYRY 608 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~--l~i~--g~Gd~ee~~~~~~l~~li~~l~--L~~---~V~flG--~~~d~v~~~el~~~ 608 (700)
|+..+++|++.++...|+.. ++++ +++...+.++.+++++.++++. +.+ .+.|.| +....++.+++..+
T Consensus 293 Gi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~al 372 (797)
T PLN03063 293 GIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCAL 372 (797)
T ss_pred CHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHH
Confidence 99999999999998877653 3332 2222222234455666666653 322 223333 11135678999999
Q ss_pred HHccCcEEEeCCCCCCccHHHHHHHHcCCC----EEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 005365 609 ICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPS 684 (700)
Q Consensus 609 la~~aDvfV~PS~~E~fGl~vlEAMA~GlP----VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~ 684 (700)
|+. ||+||+||..||||++++||||||+| +|+|..+|.++.+ +.+|++++|.|++++|++|.++++ .+++
T Consensus 373 y~~-ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~ 446 (797)
T PLN03063 373 YAI-TDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDE 446 (797)
T ss_pred HHh-CCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHH
Confidence 996 99999999999999999999999999 9999999999987 567999999999999999999983 4888
Q ss_pred HHHHHHHHHHHHHHhC
Q 005365 685 YWDKISLGGLKRIEEK 700 (700)
Q Consensus 685 ~~~~ms~~ar~ra~e~ 700 (700)
.+++..+++++++.++
T Consensus 447 er~~r~~~~~~~v~~~ 462 (797)
T PLN03063 447 ERETRHRHNFQYVKTH 462 (797)
T ss_pred HHHHHHHHHHHhhhhC
Confidence 8888888888887653
No 79
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.79 E-value=4.4e-18 Score=187.02 Aligned_cols=241 Identities=12% Similarity=0.079 Sum_probs=150.1
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
.+.+.+.+. +||+||++++..+......++..++|+++..++..... . ++.+.
T Consensus 95 ~l~~~l~~~---~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------~------------------~~~~~ 147 (380)
T PRK13609 95 RLKLLLQAE---KPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------I------------------WVHRE 147 (380)
T ss_pred HHHHHHHHh---CcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------c------------------cccCC
Confidence 344445444 89999998766555444444556789886665431110 1 23667
Q ss_pred CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce------------ecCCCCcc-ccccCCchhhh
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN------------IVSPGADM-SIYFPYTEEKR 539 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~------------vIp~G~d~-~~F~g~~~~~K 539 (700)
+|.+++.|....+.+.+ +. .....+.. .|+++.. .+. -++++... .++.|+....|
T Consensus 148 ad~i~~~s~~~~~~l~~----~g----i~~~ki~v--~G~p~~~-~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k 216 (380)
T PRK13609 148 VDRYFVATDHVKKVLVD----IG----VPPEQVVE--TGIPIRS-SFELKINPDIIYNKYQLCPNKKILLIMAGAHGVLG 216 (380)
T ss_pred CCEEEECCHHHHHHHHH----cC----CChhHEEE--ECcccCh-HHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCc
Confidence 99999999766543322 11 11111222 2444311 110 01112222 23446666678
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP 619 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 619 (700)
++..+++++.+ .++..++++++++++ ..+++++++++++ ++|+|+|+++ ++.++|+. +|++|.
T Consensus 217 ~~~~li~~l~~----~~~~~~viv~G~~~~---~~~~l~~~~~~~~--~~v~~~g~~~------~~~~l~~~-aD~~v~- 279 (380)
T PRK13609 217 NVKELCQSLMS----VPDLQVVVVCGKNEA---LKQSLEDLQETNP--DALKVFGYVE------NIDELFRV-TSCMIT- 279 (380)
T ss_pred CHHHHHHHHhh----CCCcEEEEEeCCCHH---HHHHHHHHHhcCC--CcEEEEechh------hHHHHHHh-ccEEEe-
Confidence 88777776643 245566666544432 2355666666554 6799999653 46778886 999985
Q ss_pred CCCCCccHHHHHHHHcCCCEEEcC-CCCc----ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 620 ALYEAFGLTVVEAMTCGLPTFATC-KGGP----AEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 620 S~~E~fGl~vlEAMA~GlPVVAT~-~GG~----~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
++.|++++|||+||+|||+++ .+|. .+.+.+ +|+.+...|+++++++|.+++ +||+.+++|+++++
T Consensus 280 ---~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~~l~~~i~~ll----~~~~~~~~m~~~~~ 350 (380)
T PRK13609 280 ---KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDEEVFAKTEALL----QDDMKLLQMKEAMK 350 (380)
T ss_pred ---CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 466999999999999999985 5552 223432 455555679999999999998 89999999999987
Q ss_pred HHH
Q 005365 695 KRI 697 (700)
Q Consensus 695 ~ra 697 (700)
+..
T Consensus 351 ~~~ 353 (380)
T PRK13609 351 SLY 353 (380)
T ss_pred HhC
Confidence 654
No 80
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.73 E-value=3.6e-16 Score=172.30 Aligned_cols=238 Identities=14% Similarity=0.079 Sum_probs=148.0
Q ss_pred CCeEEEEcCCCc-hHHHHHHHH-----hcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 405 KPDLIIGNYSDG-NIVASLLAH-----KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 405 ~pDlIh~h~~~~-~lva~lla~-----~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
+||+||++++.. ...+..+++ ..++|+++++.++.... .. +..+.+|.+++
T Consensus 100 ~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----~~------------------w~~~~~d~~~~ 156 (382)
T PLN02605 100 KPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----PT------------------WFHKGVTRCFC 156 (382)
T ss_pred CcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----cc------------------cccCCCCEEEE
Confidence 899999965332 222222332 24789988777642110 11 23567999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCCCC-CCCcc---------eecCCCCccccccCCchhhhchhhHHHHH
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV-FDPKF---------NIVSPGADMSIYFPYTEEKRRLKSFHPEI 548 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~-~~~k~---------~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai 548 (700)
.|...++.+.+. + +....+.++.++++. +.... .-++++....+|.|+....|++..+++++
T Consensus 157 ~s~~~~~~l~~~-g-------~~~~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l 228 (382)
T PLN02605 157 PSEEVAKRALKR-G-------LEPSQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARAL 228 (382)
T ss_pred CCHHHHHHHHHc-C-------CCHHHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHH
Confidence 997665433222 1 111223333334421 10000 01234445677889888888888888888
Q ss_pred HHHhh----cCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCC
Q 005365 549 EELLY----SDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 624 (700)
Q Consensus 549 ~~Ll~----~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~ 624 (700)
..+.. ..++..+.++. |+++ ...+.+.+. ....+|+|+|+++ ++..+|+. +|++|.++
T Consensus 229 ~~~~~~~~~~~~~~~~~vi~-G~~~--~~~~~L~~~----~~~~~v~~~G~~~------~~~~l~~a-aDv~V~~~---- 290 (382)
T PLN02605 229 GDSLYDKNLGKPIGQVVVIC-GRNK--KLQSKLESR----DWKIPVKVRGFVT------NMEEWMGA-CDCIITKA---- 290 (382)
T ss_pred HHhhccccccCCCceEEEEE-CCCH--HHHHHHHhh----cccCCeEEEeccc------cHHHHHHh-CCEEEECC----
Confidence 76541 12334333332 3222 112333332 2345799999653 57888886 99999865
Q ss_pred ccHHHHHHHHcCCCEEEcCC------CCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC-HHHHHHHHHHHHHHH
Q 005365 625 FGLTVVEAMTCGLPTFATCK------GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD-PSYWDKISLGGLKRI 697 (700)
Q Consensus 625 fGl~vlEAMA~GlPVVAT~~------GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d-p~~~~~ms~~ar~ra 697 (700)
.|++++|||+||+|+|+|+. |+...+ .++..|+.+ +|+++++++|.+++ .| ++.+++|++++++++
T Consensus 291 g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~~g~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~ 363 (382)
T PLN02605 291 GPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VDNGFGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA 363 (382)
T ss_pred CcchHHHHHHcCCCEEEecCCCccchhhHHHH-HhCCceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc
Confidence 48899999999999999983 444444 445567665 69999999999998 66 999999999998876
Q ss_pred H
Q 005365 698 E 698 (700)
Q Consensus 698 ~ 698 (700)
.
T Consensus 364 ~ 364 (382)
T PLN02605 364 R 364 (382)
T ss_pred C
Confidence 4
No 81
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.72 E-value=2e-15 Score=165.82 Aligned_cols=223 Identities=13% Similarity=0.017 Sum_probs=145.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 403 ~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
+.+.++++.+.+....++ +...+.++|+.+++..... .... .+ ....|+.++++||.|+++|..
T Consensus 100 ~~~~~i~~~~~P~~~~~~---~~~~~~~~Vyd~~D~~~~~-~~~~-~~-----------~~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPVA---ALLQASLVVYDCVDDLSAF-PGGP-PE-----------LLEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHHH---hhcCCCeEEEEcccchhcc-CCCC-HH-----------HHHHHHHHHHhCCEEEECCHH
Confidence 445666666554443333 3356789999998754322 1110 10 013477889999999999966
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-----------cCCCCccccccCCchhhhchhhHHHHHHHH
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-----------VSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~L 551 (700)
..+ .+..+. +....++||+|. ..+.. ...+.....|+|++.+.++++.+. + +
T Consensus 164 l~~----~~~~~~-------~~i~~i~ngvd~--~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~ll~-~---l 226 (373)
T cd04950 164 LYE----AKRRLN-------PNVVLVPNGVDY--EHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLELLE-A---L 226 (373)
T ss_pred HHH----HHhhCC-------CCEEEcccccCH--HHhhcccccCCChhHHhcCCCCEEEEEeccccccCHHHHH-H---H
Confidence 543 333221 457778999983 22211 112334678999998866654333 3 3
Q ss_pred hhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC-----CCcc
Q 005365 552 LYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-----EAFG 626 (700)
Q Consensus 552 l~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-----E~fG 626 (700)
....++..++++|.++... . ... +...++|+|+| .++.+++..|++. +|++++|+.. +++|
T Consensus 227 a~~~p~~~~vliG~~~~~~--~---~~~----~~~~~nV~~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P 292 (373)
T cd04950 227 AKARPDWSFVLIGPVDVSI--D---PSA----LLRLPNVHYLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSP 292 (373)
T ss_pred HHHCCCCEEEEECCCcCcc--C---hhH----hccCCCEEEeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCc
Confidence 3345678888888773211 1 111 11246799999 6667999999997 9999999863 4689
Q ss_pred HHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
++++||||||+|||+|+.++. ++.+..+++ .++|+++++++|.+++
T Consensus 293 ~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~~~~~ai~~~l 338 (373)
T cd04950 293 LKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPEEFVAAIEKAL 338 (373)
T ss_pred chHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHHHHHHHHHHHH
Confidence 999999999999999986544 444444444 4569999999999976
No 82
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.71 E-value=1.1e-15 Score=165.47 Aligned_cols=235 Identities=14% Similarity=0.090 Sum_probs=150.5
Q ss_pred CC-eEEEEcCCCch---HHHHH--HHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 405 KP-DLIIGNYSDGN---IVASL--LAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 405 ~p-DlIh~h~~~~~---lva~l--la~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
++ |+||.+++... +...+ ..++.|+|+|+++|+.++....... + + ...|+..+++||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~---------~-~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNY---------Y-L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccc---------h-h---hHHHHHHHHhCCEEEE
Confidence 56 99999885442 11222 2234479999999998654321110 0 0 1236778999999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~ 558 (700)
.|...++.+++ +. +....+..+.+............+......+|.|++.+.+.+ .. ..++.
T Consensus 130 ~S~~~~~~l~~----~g----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~yaG~l~k~~~l-------~~---~~~~~ 191 (333)
T PRK09814 130 HSKKMKDRLVE----EG----LTTDKIIVQGIFDYLNDIELVKTPSFQKKINFAGNLEKSPFL-------KN---WSQGI 191 (333)
T ss_pred CCHHHHHHHHH----cC----CCcCceEecccccccccccccccccCCceEEEecChhhchHH-------Hh---cCCCC
Confidence 99766554432 21 111112222221111000111012233467899998843321 11 23456
Q ss_pred cEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC-CC----------CCCccH
Q 005365 559 KEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP-AL----------YEAFGL 627 (700)
Q Consensus 559 ~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P-S~----------~E~fGl 627 (700)
.++++|.|.... ...++|.|+| .++.+|+..+++. |+.+.+ +. .-++|.
T Consensus 192 ~l~i~G~g~~~~--------------~~~~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~ 251 (333)
T PRK09814 192 KLTVFGPNPEDL--------------ENSANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPH 251 (333)
T ss_pred eEEEECCCcccc--------------ccCCCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchH
Confidence 677777663211 2457899999 6667999999985 433332 11 136789
Q ss_pred HHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 628 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 628 ~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++.|+||||+|||+++.++.+++|+++.+|++++ +.++++++|..+ +++.+++|++++++.+.
T Consensus 252 K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~~ 314 (333)
T PRK09814 252 KLSLYLAAGLPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI------TEEEYQEMVENVKKISK 314 (333)
T ss_pred HHHHHHHCCCCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 778899988874 45778999999998775
No 83
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.69 E-value=7.6e-16 Score=182.82 Aligned_cols=279 Identities=14% Similarity=0.086 Sum_probs=181.0
Q ss_pred HHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 394 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
++..+.+... .-|+|..|.+...+++..+.++. ..++.+-.|..++........+| ...-...|-.
T Consensus 123 fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~------------~~~ll~~ll~ 189 (726)
T PRK14501 123 FAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPW------------REEILEGLLG 189 (726)
T ss_pred HHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCCC------------hHHHHHHHhc
Confidence 3334444332 45999999999888888886653 45788888876543311111111 1112346778
Q ss_pred CCEEEecCHHHHHhhhhhhccc---c-ccccccC----CCeEEeecCCCCCCCcce----------------ecCCCCcc
Q 005365 473 TDFIITSTFQEIAGSKDTVGQY---E-SHTAFTL----PGLYRVVHGIDVFDPKFN----------------IVSPGADM 528 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y---~-~~~~~~~----p~l~~v~nGId~~~~k~~----------------vIp~G~d~ 528 (700)
+|.|-..+......+.+..... . ....... ..+..+++|||. .++. -..++...
T Consensus 190 ~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~--~~f~~~~~~~~~~~~~~~lr~~~~~~~~ 267 (726)
T PRK14501 190 ADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDY--DKFHNSAQDPEVQEEIRRLRQDLRGRKI 267 (726)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcH--HHHHHHhcCchHHHHHHHHHHHcCCCEE
Confidence 9999988877654433322111 0 0000111 125566788873 2221 11234446
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCC----ccEEEEecC--Ch-h-hHHHHHHHHHHHHHcC----C---CCcEEEe
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVE----NKEHLKESK--DL-E-EQAEMKKMYSLIDQYK----L---NGQFRWI 593 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~----~~l~i~g~G--d~-e-e~~~~~~l~~li~~l~----L---~~~V~fl 593 (700)
.++++|+...||+..+++|++.++...|+ ..+++++.+ ++ + ..+..+++.+++.+.+ . .+-+.|.
T Consensus 268 il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~ 347 (726)
T PRK14501 268 ILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFY 347 (726)
T ss_pred EEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEe
Confidence 77899999999999999999999887775 345666544 22 2 1223334444444432 1 1223455
Q ss_pred ccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHc-----CCCEEEcCCCCcccccccCCeEEEECCCCHHHH
Q 005365 594 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-----GLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQA 668 (700)
Q Consensus 594 G~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~-----GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaL 668 (700)
| .++.+++..+|+. ||+||+||..||||++++||||| |+||++...|+..+++ .|++++|.|++++
T Consensus 348 ~----~~~~~~l~~ly~~-aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~l 418 (726)
T PRK14501 348 R----SLPFEELVALYRA-ADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGI 418 (726)
T ss_pred C----CCCHHHHHHHHHh-ccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHH
Confidence 6 6678999999996 99999999999999999999999 5577777888888876 3899999999999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 669 AEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 669 AeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|++|.+++. .+++.+.+..+++++++.+
T Consensus 419 a~ai~~~l~---~~~~e~~~r~~~~~~~v~~ 446 (726)
T PRK14501 419 AAAIKRALE---MPEEEQRERMQAMQERLRR 446 (726)
T ss_pred HHHHHHHHc---CCHHHHHHHHHHHHHHHHh
Confidence 999999982 2344555555677777653
No 84
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.68 E-value=4.2e-15 Score=164.42 Aligned_cols=242 Identities=14% Similarity=0.135 Sum_probs=148.2
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
.+.+.+.+. +||+||++.+...+.....++..++|+++...+... ...| ..+.
T Consensus 95 ~l~~~l~~~---kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~------~~~w------------------~~~~ 147 (391)
T PRK13608 95 KLINLLIKE---KPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRL------HKNW------------------ITPY 147 (391)
T ss_pred HHHHHHHHh---CcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCc------cccc------------------ccCC
Confidence 444555554 899999976554433333334568898764443210 0112 2456
Q ss_pred CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce------------ecCCCCcc-ccccCCchhhh
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN------------IVSPGADM-SIYFPYTEEKR 539 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~------------vIp~G~d~-~~F~g~~~~~K 539 (700)
+|.+++.|+..++.+.+. + ++.-...+.|+++.. .+. -++++... .++.|+....|
T Consensus 148 ~d~~~v~s~~~~~~l~~~-g---------i~~~ki~v~GiPv~~-~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k 216 (391)
T PRK13608 148 STRYYVATKETKQDFIDV-G---------IDPSTVKVTGIPIDN-KFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSK 216 (391)
T ss_pred CCEEEECCHHHHHHHHHc-C---------CCHHHEEEECeecCh-HhcccccHHHHHHHcCCCCCCCEEEEECCCcccch
Confidence 999999997765543321 1 111112223444311 111 01122222 34578888789
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP 619 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 619 (700)
++..+++++. ...++..++++++++.+ ..+++. +.++..++|.|+|++ +++..+|+. ||++|.
T Consensus 217 ~~~~li~~~~---~~~~~~~~vvv~G~~~~---l~~~l~---~~~~~~~~v~~~G~~------~~~~~~~~~-aDl~I~- 279 (391)
T PRK13608 217 GFDTMITDIL---AKSANAQVVMICGKSKE---LKRSLT---AKFKSNENVLILGYT------KHMNEWMAS-SQLMIT- 279 (391)
T ss_pred hHHHHHHHHH---hcCCCceEEEEcCCCHH---HHHHHH---HHhccCCCeEEEecc------chHHHHHHh-hhEEEe-
Confidence 9988887752 23345556555433321 122333 333445689999964 357888886 999997
Q ss_pred CCCCCccHHHHHHHHcCCCEEEcCC-CC----cccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 620 ALYEAFGLTVVEAMTCGLPTFATCK-GG----PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 620 S~~E~fGl~vlEAMA~GlPVVAT~~-GG----~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
.+.|+++.|||+||+|+|+++. +| ....+.+...|+.+ +|+++++++|.+++ +|++.+++|+++++
T Consensus 280 ---k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~~l~~~i~~ll----~~~~~~~~m~~~~~ 350 (391)
T PRK13608 280 ---KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPEEAIKIVASLT----NGNEQLTNMISTME 350 (391)
T ss_pred ---CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHHHHHHHHHHHh----cCHHHHHHHHHHHH
Confidence 3579999999999999999963 33 22334455566654 59999999999998 89999999999998
Q ss_pred HHHH
Q 005365 695 KRIE 698 (700)
Q Consensus 695 ~ra~ 698 (700)
+.+.
T Consensus 351 ~~~~ 354 (391)
T PRK13608 351 QDKI 354 (391)
T ss_pred HhcC
Confidence 8653
No 85
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.68 E-value=6e-15 Score=161.38 Aligned_cols=256 Identities=13% Similarity=0.108 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHcCCCCeEEEEcC-CCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHH-
Q 005365 391 TEDVAVEIAKELQGKPDLIIGNY-SDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLI- 468 (700)
Q Consensus 391 ~~~~~~~l~~~~~~~pDlIh~h~-~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~- 468 (700)
...+.+.+.+. +||+||+|. +...+.+.+++++.|+|++++-++. .+. .....|... . .+.
T Consensus 75 ~~~l~~~l~~~---~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~--~~~~~~~~~------~-----~r~~ 137 (365)
T TIGR00236 75 LEGLEELLLEE---KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTG--DRYSPMPEE------I-----NRQL 137 (365)
T ss_pred HHHHHHHHHHc---CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcC--CCCCCCccH------H-----HHHH
Confidence 34455555555 899999986 4556778889999999998765443 110 000011100 0 112
Q ss_pred HHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCC-----C-ccee---cCCCCccccccC-C-ch
Q 005365 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFD-----P-KFNI---VSPGADMSIYFP-Y-TE 536 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~-----~-k~~v---Ip~G~d~~~F~g-~-~~ 536 (700)
..+.+|.++++|...++.+.+. | .....+..+.|++ |... . +-.+ ........++.+ + ..
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~~-G-------~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~ 209 (365)
T TIGR00236 138 TGHIADLHFAPTEQAKDNLLRE-N-------VKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRREN 209 (365)
T ss_pred HHHHHHhccCCCHHHHHHHHHc-C-------CCcccEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhh
Confidence 2335899999997766544321 2 1112355666664 3100 0 0000 011112233333 2 23
Q ss_pred hhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 537 EKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 537 ~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
..|++..+++++.++....++..+++.+.++... .+. +.+.++..++|.|+| .+...++..++++ +|++
T Consensus 210 ~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~---~~~---~~~~~~~~~~v~~~~----~~~~~~~~~~l~~-ad~v 278 (365)
T TIGR00236 210 VGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVV---REP---LHKHLGDSKRVHLIE----PLEYLDFLNLAAN-SHLI 278 (365)
T ss_pred hhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHH---HHH---HHHHhCCCCCEEEEC----CCChHHHHHHHHh-CCEE
Confidence 4588999999999987666666666665544321 122 333445667899998 5556788888887 9999
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
+.+| |..++|||+||+|||++ +.|+..|++.+| +|++++ .|++++++++..++ +|++.+++|++++
T Consensus 279 v~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv~-~d~~~i~~ai~~ll----~~~~~~~~~~~~~ 345 (365)
T TIGR00236 279 LTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLVG-TDKENITKAAKRLL----TDPDEYKKMSNAS 345 (365)
T ss_pred EECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEeC-CCHHHHHHHHHHHH----hChHHHHHhhhcC
Confidence 9987 66789999999999996 778899998876 566664 79999999999998 7999888887654
No 86
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.67 E-value=6.4e-15 Score=153.85 Aligned_cols=268 Identities=19% Similarity=0.224 Sum_probs=181.3
Q ss_pred CeEEEEcCCCchH---HHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 406 PDLIIGNYSDGNI---VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 406 pDlIh~h~~~~~l---va~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
+|++|.+...... .........+.+.+...|.............-. ...... .............+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLL--LGLLRL-LLKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhh--HHHHHH-HHHHHHHhccccccEEEECCHH
Confidence 5999986644433 344555566788888888775433211110000 000000 0000011112247888888866
Q ss_pred HHHhhhhhhccccccccccCCCeEEeecCCCCCCCc---ceecCCC-CccccccCCchhhhchhhHHHHHHHHhhcCCCc
Q 005365 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK---FNIVSPG-ADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (700)
Q Consensus 483 ~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k---~~vIp~G-~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~ 558 (700)
.....+..... .....++++++...-. +.+.+.. ....+|+|+..+.|++..+++++..+....++.
T Consensus 161 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~ 231 (381)
T COG0438 161 LKELLEALGVP---------NKIVVIPNGIDTEKFAPARIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDI 231 (381)
T ss_pred HHHHHHHhCCC---------CCceEecCCcCHHHcCccccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCe
Confidence 52221111110 1345566777632111 2222222 256789999999999999999999998766556
Q ss_pred cEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC
Q 005365 559 KEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 638 (700)
Q Consensus 559 ~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP 638 (700)
.+.++|.++.. .+.+.+++.+++..+.|.|+| .++.+++..+++. +|++++||.+|+||++++|||+||+|
T Consensus 232 ~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~p 302 (381)
T COG0438 232 KLVIVGDGPER----REELEKLAKKLGLEDNVKFLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTP 302 (381)
T ss_pred EEEEEcCCCcc----HHHHHHHHHHhCCCCcEEEec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCc
Confidence 77888877542 234555778888888899999 4445788888876 99999999999999999999999999
Q ss_pred EEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 639 TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 639 VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
||+|+.++..|++.++.+|+++++.|++++++++..++ ++++.++.+++.+++++.
T Consensus 303 vi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~ 358 (381)
T COG0438 303 VIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLL----EDPELREELGEAARERVE 358 (381)
T ss_pred EEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHH
Confidence 99999999999999887899888778999999999998 777888888876665553
No 87
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.66 E-value=8.9e-15 Score=160.58 Aligned_cols=241 Identities=15% Similarity=0.153 Sum_probs=148.3
Q ss_pred HHHHHHHHcCCCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhh
Q 005365 394 VAVEIAKELQGKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~ 472 (700)
+.+.+++. +||+||++.+. ........+++.|+|+++..+.. .|..... .. +...+.
T Consensus 77 ~~~~l~~~---kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~---~~------~~~~~~ 134 (380)
T PRK00025 77 LKRRLLAE---PPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQG---RA------FKIAKA 134 (380)
T ss_pred HHHHHHHc---CCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCch---HH------HHHHHH
Confidence 44444444 89999997543 22222334566799988765432 1110000 00 123667
Q ss_pred CCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC------c------ceecCCCCccc-cccC-Cchhh
Q 005365 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP------K------FNIVSPGADMS-IYFP-YTEEK 538 (700)
Q Consensus 473 AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~------k------~~vIp~G~d~~-~F~g-~~~~~ 538 (700)
+|.|+++|+...+.+ .++. .+ .++.|.++.+. + +. ++++.... ++.| +....
T Consensus 135 ~d~i~~~~~~~~~~~----~~~g------~~---~~~~G~p~~~~~~~~~~~~~~~~~l~-~~~~~~~il~~~gsr~~~~ 200 (380)
T PRK00025 135 TDHVLALFPFEAAFY----DKLG------VP---VTFVGHPLADAIPLLPDRAAARARLG-LDPDARVLALLPGSRGQEI 200 (380)
T ss_pred HhhheeCCccCHHHH----HhcC------CC---eEEECcCHHHhcccccChHHHHHHcC-CCCCCCEEEEECCCCHHHH
Confidence 899999996654422 2111 11 12233322110 0 11 11222222 2333 23333
Q ss_pred -hchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc-CCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 539 -RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY-KLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 539 -Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l-~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
+.+..++++++.+....++..++++++ +++ ..+++.+.++++ ++. +.+.. +++..+|+. +|++
T Consensus 201 ~~~~~~l~~a~~~l~~~~~~~~~ii~~~-~~~---~~~~~~~~~~~~~~~~--v~~~~--------~~~~~~~~~-aDl~ 265 (380)
T PRK00025 201 KRLLPPFLKAAQLLQQRYPDLRFVLPLV-NPK---RREQIEEALAEYAGLE--VTLLD--------GQKREAMAA-ADAA 265 (380)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEecC-Chh---hHHHHHHHHhhcCCCC--eEEEc--------ccHHHHHHh-CCEE
Confidence 346788899988876666666666543 232 224556666665 543 55542 467888886 9999
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEc-----------------CCCCcccccccCC--eEEEECCCCHHHHHHHHHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFAT-----------------CKGGPAEIIVNGK--SGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT-----------------~~GG~~EiI~dg~--~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
|.+| |.+.+|||+||+|+|++ +.+++++++.++. .+++.+..|++++++++.+++
T Consensus 266 v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll- 339 (380)
T PRK00025 266 LAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLL- 339 (380)
T ss_pred EECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHh-
Confidence 9997 88889999999999987 5677788887764 557778889999999999998
Q ss_pred hccCCHHHHHHHHHHHH
Q 005365 678 KCKADPSYWDKISLGGL 694 (700)
Q Consensus 678 ~~~~dp~~~~~ms~~ar 694 (700)
+|++.+++|++++.
T Consensus 340 ---~~~~~~~~~~~~~~ 353 (380)
T PRK00025 340 ---ADGARRQALLEGFT 353 (380)
T ss_pred ---cCHHHHHHHHHHHH
Confidence 89999999999864
No 88
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.62 E-value=1.8e-13 Score=141.43 Aligned_cols=272 Identities=17% Similarity=0.166 Sum_probs=181.1
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCcccc--------CCCC-chhhhhcccccchhhhhhHHHHHHhhC
Q 005365 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTK--------YPDS-DIYWKNLDDKYHFSCQFTADLIAMNHT 473 (700)
Q Consensus 403 ~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~--------~~~~-~~~w~~~~~~y~~~~~~~~E~~al~~A 473 (700)
+..||+.+-....+- .-...++..++|++.-+|-....+ .+.+ -..|.++.-.-.|++. -..+-..|
T Consensus 148 r~~Pdi~IDtMGY~f-s~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~l---Y~~~G~~a 223 (465)
T KOG1387|consen 148 RFPPDIFIDTMGYPF-SYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALL---YQSAGSKA 223 (465)
T ss_pred hCCchheEecCCCcc-hhHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHH---HHhccccc
Confidence 348999887442221 122344467899999999432111 0011 2223322111111111 12345689
Q ss_pred CEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCc--ceecCCCCccccccCCchhhhchhhHHHHHHHH
Q 005365 474 DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK--FNIVSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (700)
Q Consensus 474 D~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k--~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~L 551 (700)
|.++++|.....-++..++.. ...+|++..++.+-+ +..-.......++.+..+|+|+.. +++..+..
T Consensus 224 d~vm~NssWT~nHI~qiW~~~---------~~~iVyPPC~~e~lks~~~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~ 293 (465)
T KOG1387|consen 224 DIVMTNSSWTNNHIKQIWQSN---------TCSIVYPPCSTEDLKSKFGTEGERENQLLSLAQFRPEKNHK-ILQLFALY 293 (465)
T ss_pred eEEEecchhhHHHHHHHhhcc---------ceeEEcCCCCHHHHHHHhcccCCcceEEEEEeecCcccccH-HHHHHHHH
Confidence 999999977654444444321 233444444421111 111011223456788899999988 44433332
Q ss_pred hhcC------CCccEEEEecCCh-hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCC
Q 005365 552 LYSD------VENKEHLKESKDL-EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 624 (700)
Q Consensus 552 l~~~------~~~~l~i~g~Gd~-ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~ 624 (700)
.... +..++.++|+--+ ++.+..+.|++++++++++++|.|.- .++.+++..++.. |.+.|+.-+.|-
T Consensus 294 ~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~~lv~lL~~-a~iGvh~MwNEH 368 (465)
T KOG1387|consen 294 LKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEK----NVPYEKLVELLGK-ATIGVHTMWNEH 368 (465)
T ss_pred HhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEe----cCCHHHHHHHhcc-ceeehhhhhhhh
Confidence 2222 3467888887544 34567789999999999999999987 6788999999997 999999999999
Q ss_pred ccHHHHHHHHcCCCEEEcCCCCc-cccccc---CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 625 FGLTVVEAMTCGLPTFATCKGGP-AEIIVN---GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 625 fGl~vlEAMA~GlPVVAT~~GG~-~EiI~d---g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
||+.|+|+||+|+-.|+.+.||+ -+||.+ ..+||+.+ +.++.|++|.++.. .|++.+..|+++||..+.
T Consensus 369 FGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~---~~~~~r~~~r~~AR~s~~ 441 (465)
T KOG1387|consen 369 FGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVK---LNYDERNMMRRNARKSLA 441 (465)
T ss_pred cchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887 566663 34799985 67889999999984 789989999999998765
No 89
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.60 E-value=1.3e-13 Score=150.08 Aligned_cols=248 Identities=13% Similarity=0.110 Sum_probs=154.6
Q ss_pred HHHHHHHHHHcCCCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al 470 (700)
..+.+.+.+. +||+||+|.. ...+.+..+++..|+|++++.|+... +... ..|.. . -....
T Consensus 78 ~~l~~~l~~~---~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~-~~~~~-------~-----r~~~~ 139 (363)
T cd03786 78 IGLEAVLLEE---KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRG-MPDEE-------N-----RHAID 139 (363)
T ss_pred HHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCC-CCchH-------H-----HHHHH
Confidence 3444555554 8999999863 34566778888899999876665321 1001 01110 0 11235
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCC-----C--cc----eecCCCCccccccCCchh-
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFD-----P--KF----NIVSPGADMSIYFPYTEE- 537 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~-----~--k~----~vIp~G~d~~~F~g~~~~- 537 (700)
+.+|.++++|...++.+. ++ +.....++.+.|++ +... . .. .-+++..-..++.++...
T Consensus 140 ~~ad~~~~~s~~~~~~l~----~~----G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~ 211 (363)
T cd03786 140 KLSDLHFAPTEEARRNLL----QE----GEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENV 211 (363)
T ss_pred HHhhhccCCCHHHHHHHH----Hc----CCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCcccc
Confidence 678999999977654332 22 11222344555653 3110 0 00 011121112335555543
Q ss_pred --hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChhHHHHHHHccCc
Q 005365 538 --KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL-NGQFRWISSQMNRVRNGELYRYICDTKG 614 (700)
Q Consensus 538 --~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L-~~~V~flG~~~d~v~~~el~~~la~~aD 614 (700)
.|++..++++++.+... ++.+++.++++. .+.+++.++++++ .++|+|+| .....++..+++. ||
T Consensus 212 ~~~k~~~~l~~al~~l~~~----~~~vi~~~~~~~---~~~l~~~~~~~~~~~~~v~~~~----~~~~~~~~~l~~~-ad 279 (363)
T cd03786 212 DDGEQLEEILEALAELAEE----DVPVVFPNHPRT---RPRIREAGLEFLGHHPNVLLIS----PLGYLYFLLLLKN-AD 279 (363)
T ss_pred CChHHHHHHHHHHHHHHhc----CCEEEEECCCCh---HHHHHHHHHhhccCCCCEEEEC----CcCHHHHHHHHHc-Cc
Confidence 68999999999888532 345555444432 2456666777776 67899998 4445788888886 99
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEcCC-CCcccccccCCeEEEECCC-CHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPY-HGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~-GG~~EiI~dg~~G~lv~p~-D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
++|.||. | ++.|||+||+|||+++. +..++.+++| ..+..+ |+++++++|.+++ +|+..+.+|
T Consensus 280 ~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g---~~~~~~~~~~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 280 LVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG---TNVLVGTDPEAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred EEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee---eEEecCCCHHHHHHHHHHHh----cCchhhhcC
Confidence 9999984 4 47999999999999964 4466766544 434333 7999999999998 788777665
No 90
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.59 E-value=2.3e-13 Score=154.80 Aligned_cols=204 Identities=10% Similarity=0.118 Sum_probs=159.3
Q ss_pred HHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce--ecCCCCccccccC--CchhhhchhhH
Q 005365 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN--IVSPGADMSIYFP--YTEEKRRLKSF 544 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~--vIp~G~d~~~F~g--~~~~~Kgl~~L 544 (700)
.+..+|.+|+.|.+..+.++.+++++. ....+++|+.+. .+.. .-..-....++++ |+ ++|.++.+
T Consensus 269 ~~~~~d~iIv~T~~q~~~l~~~~~~~~-----~~~~v~~Ip~~~----~~~~~~~s~r~~~~~I~v~idrL-~ek~~~~~ 338 (519)
T TIGR03713 269 SLSRADLIIVDREDIERLLEENYRENY-----VEFDISRITPFD----TRLRLGQSQQLYETEIGFWIDGL-SDEELQQI 338 (519)
T ss_pred ChhhcCeEEEcCHHHHHHHHHHhhhcc-----cCCcceeeCccc----eEEecChhhcccceEEEEEcCCC-ChHHHHHH
Confidence 467899999999877777777776421 001122222211 1111 1112234567888 99 99999999
Q ss_pred HHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC-----------------------------CcEEEecc
Q 005365 545 HPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN-----------------------------GQFRWISS 595 (700)
Q Consensus 545 l~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~-----------------------------~~V~flG~ 595 (700)
++++..+....|+..+.+.|.++.+ ...+.++++++++++. ++|.|.|+
T Consensus 339 I~av~~~~~~~p~~~L~~~gy~~~~--~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy 416 (519)
T TIGR03713 339 LQQLLQYILKNPDYELKILTYNNDN--DITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTL 416 (519)
T ss_pred HHHHHHHHhhCCCeEEEEEEecCch--hHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEec
Confidence 9999999999999999999988642 2345677777777666 79999995
Q ss_pred ccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHH
Q 005365 596 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675 (700)
Q Consensus 596 ~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~l 675 (700)
+. ..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+.++|+||+||+++ +|..+|+++|..+
T Consensus 417 ~~----e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~ 485 (519)
T TIGR03713 417 TN----EEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII--DDISELLKALDYY 485 (519)
T ss_pred CC----HHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHH
Confidence 44 3578888887 99999999999999 9999999999999 67789999999999999 6999999999999
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHh
Q 005365 676 FEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 676 l~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
| .++..|++++..+.+.+.+
T Consensus 486 L----~~~~~wn~~~~~sy~~~~~ 505 (519)
T TIGR03713 486 L----DNLKNWNYSLAYSIKLIDD 505 (519)
T ss_pred H----hCHHHHHHHHHHHHHHHHH
Confidence 9 8999999999999987654
No 91
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.57 E-value=6.6e-13 Score=148.89 Aligned_cols=270 Identities=9% Similarity=-0.021 Sum_probs=181.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+...+++..+.++. ..++-+-.|..++..-.....+| ...-...|-.||.|=.-|...
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~------------r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPW------------REQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCc------------hHHHHHHHhcCCeEEeCCHHH
Confidence 45899999988888888886653 35777777866443311111112 111234577899999998877
Q ss_pred HHhhhhhhccccc----cc-----c----------------ccCC----CeEEeecCCCCCCCcceec------------
Q 005365 484 IAGSKDTVGQYES----HT-----A----------------FTLP----GLYRVVHGIDVFDPKFNIV------------ 522 (700)
Q Consensus 484 ~~~~k~~~~~y~~----~~-----~----------------~~~p----~l~~v~nGId~~~~k~~vI------------ 522 (700)
..-+.+.....-. .. . .... .+-.++.|||. .+|.-.
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~--~~f~~~~~~~~~~~~~~~ 277 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDP--ERIRSALAAASIREMMER 277 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecH--HHHHHHhcCchHHHHHHH
Confidence 6544443321100 00 0 0000 13445566662 222110
Q ss_pred ----CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc----cEEEEecCChh----hHHHHHHHHHHHHHc------
Q 005365 523 ----SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN----KEHLKESKDLE----EQAEMKKMYSLIDQY------ 584 (700)
Q Consensus 523 ----p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~----~l~i~g~Gd~e----e~~~~~~l~~li~~l------ 584 (700)
-.+....++++|++..||+...+.|++.++...|+. .++.++.+... ..+..+++.+++.+.
T Consensus 278 lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~ 357 (487)
T TIGR02398 278 IRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFAR 357 (487)
T ss_pred HHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCC
Confidence 013345667888999999999999999999988863 56666665432 233445666666654
Q ss_pred -CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC----CEEEcCCCCcccccccCCeEEE
Q 005365 585 -KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFATCKGGPAEIIVNGKSGYH 659 (700)
Q Consensus 585 -~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl----PVVAT~~GG~~EiI~dg~~G~l 659 (700)
+..+-+.|.+ .++.+++..+|+. |||++.+|..||++++..|+|||+. |+|.|..+|.++.+. .+++
T Consensus 358 ~~~~pv~~~~~----~v~~~el~alYr~-ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l~---~All 429 (487)
T TIGR02398 358 IGWTPLQFFTR----SLPYEEVSAWFAM-ADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELK---GALL 429 (487)
T ss_pred CCCccEEEEcC----CCCHHHHHHHHHh-CCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhcC---CCEE
Confidence 3344456666 7788999999996 9999999999999999999999999 999999999987773 4899
Q ss_pred ECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 660 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 660 v~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+|.|++++|++|.+.++ ..++.+++--+.-++++.+
T Consensus 430 VNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v~~ 466 (487)
T TIGR02398 430 TNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAVNY 466 (487)
T ss_pred ECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHhh
Confidence 999999999999999983 4555555555555555543
No 92
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.52 E-value=2.7e-12 Score=147.88 Aligned_cols=299 Identities=12% Similarity=0.122 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHh--------------cCCcEEEEecCCccccC---CCC-------
Q 005365 391 TEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK--------------LGVTQCTIAHALEKTKY---PDS------- 446 (700)
Q Consensus 391 ~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~--------------~giP~V~t~H~l~~~~~---~~~------- 446 (700)
.....+.++ .++.+||+||+|.+.++++...+.+. .+.++++|.|++.+... +..
T Consensus 148 ~~a~l~~l~-~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~ 226 (601)
T TIGR02094 148 GIGGVRALR-ALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFG 226 (601)
T ss_pred HHHHHHHHH-HcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhh
Confidence 334444443 34569999999999999877765332 13678999999865442 211
Q ss_pred ------chhhhhc---ccccc-hhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCC
Q 005365 447 ------DIYWKNL---DDKYH-FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 447 ------~~~w~~~---~~~y~-~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
++.|..+ ...+. ...++..-+.++..||.|.++|+...+..++..+.+..-.....-.+..|.|||+...
T Consensus 227 ~~~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~ 306 (601)
T TIGR02094 227 DYAANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPT 306 (601)
T ss_pred hhhhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccc
Confidence 0111110 00000 0012333457899999999999877664443333210000000112567889997521
Q ss_pred --C-------------c---------------------c---------ee----------------------------cC
Q 005365 517 --P-------------K---------------------F---------NI----------------------------VS 523 (700)
Q Consensus 517 --~-------------k---------------------~---------~v----------------------------Ip 523 (700)
+ . + .. +.
T Consensus 307 W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~d 386 (601)
T TIGR02094 307 WVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLD 386 (601)
T ss_pred cCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccC
Confidence 0 0 0 00 12
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhh--cC--CCccEEEEecCChh---hHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLY--SD--VENKEHLKESKDLE---EQAEMKKMYSLIDQYKLNGQFRWISSQ 596 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~--~~--~~~~l~i~g~Gd~e---e~~~~~~l~~li~~l~L~~~V~flG~~ 596 (700)
+.+.++.|+.|+...||.+.++.+++.+.. .. ....+++.|.++.. .++.++.+.+++++...+++|.|+-
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~-- 464 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLE-- 464 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEc--
Confidence 333356678899999999999999888874 21 24667888877643 2345677777777656778999985
Q ss_pred cCcCChhHHHHHHHccCcEEEe-CCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECC------------
Q 005365 597 MNRVRNGELYRYICDTKGAFVQ-PAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP------------ 662 (700)
Q Consensus 597 ~d~v~~~el~~~la~~aDvfV~-PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p------------ 662 (700)
+ -+..+.+.+..++|++++ ||+ +|++|++-+-||..|.+.+++-.|...|.. ++.|||.+.+
T Consensus 465 -~--Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d~ 540 (601)
T TIGR02094 465 -N--YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQDR 540 (601)
T ss_pred -C--CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccccccC
Confidence 1 246777777777999999 999 999999999999999999999999999987 6779999984
Q ss_pred CCHHHHHHHHHHHH-HhccCC-----HHHHHHHHHHHHHH
Q 005365 663 YHGEQAAEILVDFF-EKCKAD-----PSYWDKISLGGLKR 696 (700)
Q Consensus 663 ~D~eaLAeaI~~ll-~~~~~d-----p~~~~~ms~~ar~r 696 (700)
.|+++|.++|.+.+ ....++ |..|.+|.++|.+.
T Consensus 541 ~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~ 580 (601)
T TIGR02094 541 LDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIAT 580 (601)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhc
Confidence 89999999997655 323343 66799999998875
No 93
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=6.6e-12 Score=130.20 Aligned_cols=350 Identities=12% Similarity=0.064 Sum_probs=208.8
Q ss_pred HHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHH
Q 005365 318 LLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVE 397 (700)
Q Consensus 318 a~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~ 397 (700)
|..|++.|++|+ ++.-..+. +.+.+-..++++|+.+|..+.....++.+ +....-+..|..-+...
T Consensus 33 A~Sla~~gf~Vd----liGy~~s~--------p~e~l~~hprI~ih~m~~l~~~~~~p~~~--~l~lKvf~Qfl~Ll~aL 98 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVESI--------PLEELLNHPRIRIHGMPNLPFLQGGPRVL--FLPLKVFWQFLSLLWAL 98 (444)
T ss_pred HHHHHHcCCeEE----EEEecCCC--------ChHHHhcCCceEEEeCCCCcccCCCchhh--hhHHHHHHHHHHHHHHH
Confidence 456899999999 77644321 22233335678888887654322111100 00111112222111211
Q ss_pred HHHHcCCCCeEEEEcCCCc---hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCC
Q 005365 398 IAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD 474 (700)
Q Consensus 398 l~~~~~~~pDlIh~h~~~~---~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD 474 (700)
+. .+.+|+|....+.+ -.++.+.+...|.+++.+.|++..+. . -...........++..+ .|+..-+.||
T Consensus 99 ~~---~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl-~-l~~~~g~~h~lV~l~~~--~E~~fgk~a~ 171 (444)
T KOG2941|consen 99 FV---LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSL-Q-LKLKLGFQHPLVRLVRW--LEKYFGKLAD 171 (444)
T ss_pred Hh---ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHH-H-HHhhcCCCCchHHHHHH--HHHHhhcccc
Confidence 11 34799988844322 23566666778999999999875431 0 00000111122233333 3888889999
Q ss_pred EEEecCHHHHHhhhhhhccccccccccCCCe-----------EEeecCC-CCCCCcc------------eecCCCCcc--
Q 005365 475 FIITSTFQEIAGSKDTVGQYESHTAFTLPGL-----------YRVVHGI-DVFDPKF------------NIVSPGADM-- 528 (700)
Q Consensus 475 ~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l-----------~~v~nGI-d~~~~k~------------~vIp~G~d~-- 528 (700)
.-.|+|....+.+.+.++--..+..+.-|.. +.-..|- ..|..+. .-.++|...
T Consensus 172 ~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~ 251 (444)
T KOG2941|consen 172 YNLCVTKAMREDLIQNWGINRAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLL 251 (444)
T ss_pred cchhhHHHHHHHHHHhcCCceeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhc
Confidence 9999998777666666653222222222221 0000000 0000000 000011100
Q ss_pred ----cccc--CCchhhhchhhHHHHHHHH-----hhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEecccc
Q 005365 529 ----SIYF--PYTEEKRRLKSFHPEIEEL-----LYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 597 (700)
Q Consensus 529 ----~~F~--g~~~~~Kgl~~Ll~Ai~~L-----l~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~ 597 (700)
.+++ -.-.+..++..|++|+... .+...-+.++++..|.|+.+ +++.+.++++++.. |.+.-
T Consensus 252 ~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlk---E~Y~~~I~~~~~~~-v~~~t--- 324 (444)
T KOG2941|consen 252 PERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLK---EKYSQEIHEKNLQH-VQVCT--- 324 (444)
T ss_pred cCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchh---HHHHHHHHHhcccc-eeeee---
Confidence 0111 1113456777788888733 22222346777777777654 56778888888864 66553
Q ss_pred CcCChhHHHHHHHccCcEEEeC--CC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHH
Q 005365 598 NRVRNGELYRYICDTKGAFVQP--AL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVD 674 (700)
Q Consensus 598 d~v~~~el~~~la~~aDvfV~P--S~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ 674 (700)
.+...++...+++. ||..|+- |. -=..|++|+....||+||+|-+...+.|+|+||+||++++ |.+++|+.+..
T Consensus 325 pWL~aEDYP~ll~s-aDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~ 401 (444)
T KOG2941|consen 325 PWLEAEDYPKLLAS-ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQM 401 (444)
T ss_pred cccccccchhHhhc-cccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHH
Confidence 37777888888885 9977664 33 2357999999999999999999999999999999999997 89999999999
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHH
Q 005365 675 FFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 675 ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
+++..-.|.+..+++.+++++..+
T Consensus 402 lf~~fp~~a~~l~~lkkn~~e~~e 425 (444)
T KOG2941|consen 402 LFKNFPDNADELNQLKKNLREEQE 425 (444)
T ss_pred HHhcCCCCHHHHHHHHHhhHHHHh
Confidence 997666699999999999887643
No 94
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.44 E-value=1.7e-11 Score=145.84 Aligned_cols=272 Identities=11% Similarity=0.066 Sum_probs=179.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+.-.+++..+.++. ..++.+-.|..++..-. ++...+...-...|-.||.|=..|...
T Consensus 231 ~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Ei------------fr~LP~r~elL~glL~aDlIGFqT~~y 298 (934)
T PLN03064 231 EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEI------------HRTLPSRSELLRSVLAADLVGFHTYDY 298 (934)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHH------------HhhCCcHHHHHHHHhcCCeEEeCCHHH
Confidence 34899999999888888887664 46888888876544311 111122222234677899999999877
Q ss_pred HHhhhhhhccc---c-ccccccCCC----eEEeecCCCCCCCccee----------------cCCCCccccccCCchhhh
Q 005365 484 IAGSKDTVGQY---E-SHTAFTLPG----LYRVVHGIDVFDPKFNI----------------VSPGADMSIYFPYTEEKR 539 (700)
Q Consensus 484 ~~~~k~~~~~y---~-~~~~~~~p~----l~~v~nGId~~~~k~~v----------------Ip~G~d~~~F~g~~~~~K 539 (700)
..-+....... + ........+ +...+-||| ..++.- ...|....+.+.+++..|
T Consensus 299 ~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID--~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~K 376 (934)
T PLN03064 299 ARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGID--SDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIK 376 (934)
T ss_pred HHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEc--HHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeecccccc
Confidence 65433322111 0 001111111 223345665 222211 112444667788899999
Q ss_pred chhhHHHHHHHHhhcCCCcc--EEEE--ec---CChh-hHHHHHHHHHHHHHcC----CCC--cEEEeccccCcCChhHH
Q 005365 540 RLKSFHPEIEELLYSDVENK--EHLK--ES---KDLE-EQAEMKKMYSLIDQYK----LNG--QFRWISSQMNRVRNGEL 605 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~--l~i~--g~---Gd~e-e~~~~~~l~~li~~l~----L~~--~V~flG~~~d~v~~~el 605 (700)
|+...+.|++.++...|+.. ++++ .. ++.+ ......++.+++.+.+ -.+ -|.++. ..++.+++
T Consensus 377 GI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL 453 (934)
T PLN03064 377 GIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHAL 453 (934)
T ss_pred CHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHH
Confidence 99999999999998888753 4443 11 2222 2222233444444433 111 144443 34788999
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCC----CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccC
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl----PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~ 681 (700)
..+|+. |||||.||..|||+++..|||+|+. ++|.|..+|.++.+ +..+++|+|.|++++|++|.+++. .
T Consensus 454 ~AlY~~-ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M 527 (934)
T PLN03064 454 CALYAV-TDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---M 527 (934)
T ss_pred HHHHHh-CCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---C
Confidence 999996 9999999999999999999999954 44559999988888 556899999999999999999983 5
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 005365 682 DPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 682 dp~~~~~ms~~ar~ra~e 699 (700)
+++.+++..+++++++..
T Consensus 528 ~~~Er~~r~~~~~~~V~~ 545 (934)
T PLN03064 528 PEEEREKRHRHNFMHVTT 545 (934)
T ss_pred CHHHHHHHHHHHHhhccc
Confidence 899999999999888764
No 95
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.42 E-value=3.9e-13 Score=125.23 Aligned_cols=127 Identities=19% Similarity=0.221 Sum_probs=92.4
Q ss_pred ccccCCchhhhchhhHHH-HHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHP-EIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~-Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
..|.|+..+.|+++.+++ +++.+....++..+++.|.+.. +++++ ..++|+|+| .+ +++..
T Consensus 5 i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~-------~l~~~-----~~~~v~~~g----~~--~e~~~ 66 (135)
T PF13692_consen 5 IGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD-------ELKRL-----RRPNVRFHG----FV--EELPE 66 (135)
T ss_dssp EE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS--------HHCCH-----HHCTEEEE-----S---HHHHH
T ss_pred ccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH-------HHHHh-----cCCCEEEcC----CH--HHHHH
Confidence 456788889999999999 9999998888888888887532 12222 235899999 44 58999
Q ss_pred HHHccCcEEEeCCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 608 YICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 608 ~la~~aDvfV~PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 67 ~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 67 ILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp HHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred HHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 9997 999999985 68999999999999999999999 677777666678887 789999999999987
No 96
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.35 E-value=2.2e-10 Score=126.58 Aligned_cols=246 Identities=15% Similarity=0.148 Sum_probs=141.6
Q ss_pred HHHHHHHHHHcCCCCeEEEEcCCCc-hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~~~~-~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al 470 (700)
..+.+.+++. +||+|++....+ ++.....++.+|+|+++.+ +.+-. .|... . -+...
T Consensus 79 ~~~~~~l~~~---kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~w-------aw~~~--~---------~r~l~ 136 (385)
T TIGR00215 79 KEVVQLAKQA---KPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQVW-------AWRKW--R---------AKKIE 136 (385)
T ss_pred HHHHHHHHhc---CCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcHh-------hcCcc--h---------HHHHH
Confidence 3445555554 899999977433 4445557788999988643 21111 12110 0 12345
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CC-C---CC------cceecCCCCccccccC--Cchh
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DV-F---DP------KFNIVSPGADMSIYFP--YTEE 537 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~-~---~~------k~~vIp~G~d~~~F~g--~~~~ 537 (700)
+.+|.|+++++.+.+.+++ +. .+ ...+-|++ +. . .. ++. ++++....++.| +..+
T Consensus 137 ~~~d~v~~~~~~e~~~~~~----~g------~~-~~~vGnPv~~~~~~~~~~~~~~r~~lg-l~~~~~~Ilvl~GSR~ae 204 (385)
T TIGR00215 137 KATDFLLAILPFEKAFYQK----KN------VP-CRFVGHPLLDAIPLYKPDRKSAREKLG-IDHNGETLALLPGSRGSE 204 (385)
T ss_pred HHHhHhhccCCCcHHHHHh----cC------CC-EEEECCchhhhccccCCCHHHHHHHcC-CCCCCCEEEEECCCCHHH
Confidence 6799999999776543221 11 01 11122222 10 0 00 111 122223334443 4444
Q ss_pred -hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 538 -KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 538 -~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
.|.+..++++++.+....++..+++.+.+ +.. .+.+.++.+.++...+|.+.+ +++..+|+. ||++
T Consensus 205 i~k~~~~ll~a~~~l~~~~p~~~~vi~~~~-~~~---~~~~~~~~~~~~~~~~v~~~~--------~~~~~~l~a-ADl~ 271 (385)
T TIGR00215 205 VEKLFPLFLKAAQLLEQQEPDLRRVLPVVN-FKR---RLQFEQIKAEYGPDLQLHLID--------GDARKAMFA-ADAA 271 (385)
T ss_pred HHHhHHHHHHHHHHHHHhCCCeEEEEEeCC-chh---HHHHHHHHHHhCCCCcEEEEC--------chHHHHHHh-CCEE
Confidence 57888899999988777666666554443 221 134455556666666777765 234567775 9999
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEcC-----------------CCCcccccccCCeEE-EE-CCCCHHHHHHHHHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFATC-----------------KGGPAEIIVNGKSGY-HI-DPYHGEQAAEILVDFFE 677 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT~-----------------~GG~~EiI~dg~~G~-lv-~p~D~eaLAeaI~~ll~ 677 (700)
|++| |.+.+|||+||+|+|.+. .-+++.++.+....- +. +.-+++.+++.+.+++
T Consensus 272 V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll- 345 (385)
T TIGR00215 272 LLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLL- 345 (385)
T ss_pred eecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHh-
Confidence 9999 888889999999999872 112233333222111 11 2347889999999998
Q ss_pred hccCCH----HHHHHHHHHH
Q 005365 678 KCKADP----SYWDKISLGG 693 (700)
Q Consensus 678 ~~~~dp----~~~~~ms~~a 693 (700)
.|+ +.++++.+.-
T Consensus 346 ---~~~~~~~~~~~~~~~~~ 362 (385)
T TIGR00215 346 ---ENGLKAYKEMHRERQFF 362 (385)
T ss_pred ---cCCcccHHHHHHHHHHH
Confidence 888 7776665543
No 97
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.31 E-value=3e-10 Score=133.45 Aligned_cols=295 Identities=12% Similarity=0.124 Sum_probs=193.6
Q ss_pred HHHHHHHHcCCCCeEEEEcCCCchHHHH-----HHHHh----------cCCcEEEEecCCcccc---CCCC---------
Q 005365 394 VAVEIAKELQGKPDLIIGNYSDGNIVAS-----LLAHK----------LGVTQCTIAHALEKTK---YPDS--------- 446 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~~~lva~-----lla~~----------~giP~V~t~H~l~~~~---~~~~--------- 446 (700)
..+.+ +.++.+||+||+|.+.++++.. ++... .+..+|+|.|++.+.. ++..
T Consensus 238 gl~~L-r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~ 316 (778)
T cd04299 238 GVRAL-RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPY 316 (778)
T ss_pred HHHHH-HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHH
Confidence 33334 3345689999999999998877 44321 1457899999985433 1110
Q ss_pred ----chhhhhc---ccccc--hhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhcc-ccccccccCCCeEEeecCCCCCC
Q 005365 447 ----DIYWKNL---DDKYH--FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQ-YESHTAFTLPGLYRVVHGIDVFD 516 (700)
Q Consensus 447 ----~~~w~~~---~~~y~--~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~-y~~~~~~~~p~l~~v~nGId~~~ 516 (700)
+..|..+ ..... -...+..-..+++.|+.|.++|+-.-+..++.+.. |..... ..-.+..|.|||+...
T Consensus 317 ~~~lgl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~-~~~~i~~ITNGVh~~~ 395 (778)
T cd04299 317 ARELGLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV-EEVPIGHVTNGVHVPT 395 (778)
T ss_pred HHHcCCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc-ccCceeceeCCcchhh
Confidence 1111111 00000 00123334578999999999998764444443332 111100 0113667889987421
Q ss_pred ---Cc----c-e----------------------------------------e-------------------------cC
Q 005365 517 ---PK----F-N----------------------------------------I-------------------------VS 523 (700)
Q Consensus 517 ---~k----~-~----------------------------------------v-------------------------Ip 523 (700)
+. + . . +.
T Consensus 396 W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ld 475 (778)
T cd04299 396 WVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLD 475 (778)
T ss_pred hcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccC
Confidence 00 0 0 0 11
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhhcC----CCccEEEEecCCh---hhHHHHHHHHHHHHHcCCCCcEEEeccc
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLYSD----VENKEHLKESKDL---EEQAEMKKMYSLIDQYKLNGQFRWISSQ 596 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~----~~~~l~i~g~Gd~---ee~~~~~~l~~li~~l~L~~~V~flG~~ 596 (700)
+.+-++.|..|+...||.+.++..++.+.... ....+++.|.+.. ..+..++.+.+++++....++|.|+-
T Consensus 476 pd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle-- 553 (778)
T cd04299 476 PNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLE-- 553 (778)
T ss_pred CCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEc--
Confidence 22225667888999999999998887775421 2356777776653 22456677777777667778999985
Q ss_pred cCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECC------------
Q 005365 597 MNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP------------ 662 (700)
Q Consensus 597 ~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p------------ 662 (700)
+ -+..+.+.+-..+|++++||+ +|++|++=+-||.-|.+.+++-.|...|.. +|.|||.+.+
T Consensus 554 -~--Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~~d~ 629 (778)
T cd04299 554 -D--YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEYQDA 629 (778)
T ss_pred -C--CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChhhcch
Confidence 2 246777777778999999999 999999999999999999999999999998 7899999988
Q ss_pred CCHHHHHHHHHHHHH-hccC-----CHHHHHHHHHHHHHH
Q 005365 663 YHGEQAAEILVDFFE-KCKA-----DPSYWDKISLGGLKR 696 (700)
Q Consensus 663 ~D~eaLAeaI~~ll~-~~~~-----dp~~~~~ms~~ar~r 696 (700)
.|+++|.+.|.+-+- ...+ .|..|.+|.+++.+.
T Consensus 630 ~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~ 669 (778)
T cd04299 630 EEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMAT 669 (778)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHh
Confidence 567777777754331 2223 378899999988775
No 98
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.28 E-value=5.8e-10 Score=125.02 Aligned_cols=274 Identities=16% Similarity=0.160 Sum_probs=149.7
Q ss_pred eEEEEcCCCchHHHHHHHH-hcCCcEEEEecCCccccCCCC----------chhhhhcccccchhhhhhHHHHHHhhCCE
Q 005365 407 DLIIGNYSDGNIVASLLAH-KLGVTQCTIAHALEKTKYPDS----------DIYWKNLDDKYHFSCQFTADLIAMNHTDF 475 (700)
Q Consensus 407 DlIh~h~~~~~lva~lla~-~~giP~V~t~H~l~~~~~~~~----------~~~w~~~~~~y~~~~~~~~E~~al~~AD~ 475 (700)
=+.|+|-|..+....++.+ +..|..|+|.|+.-..++... ...+.+....+....+...|+.+...||.
T Consensus 145 ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~Adv 224 (633)
T PF05693_consen 145 VIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADV 224 (633)
T ss_dssp EEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSE
T ss_pred EEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCe
Confidence 3468899988764443332 235778999998643322111 11122223334445566779999999999
Q ss_pred EEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee------------------c----CCCC----ccc
Q 005365 476 IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI------------------V----SPGA----DMS 529 (700)
Q Consensus 476 IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v------------------I----p~G~----d~~ 529 (700)
..|+|...+...+..++.. |+ .+++||+++. ++.. + .... |..
T Consensus 225 FTTVSeITa~Ea~~LL~r~--------pD-vV~pNGl~v~--~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~t 293 (633)
T PF05693_consen 225 FTTVSEITAKEAEHLLKRK--------PD-VVTPNGLNVD--KFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKT 293 (633)
T ss_dssp EEESSHHHHHHHHHHHSS----------S-EE----B-GG--GTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGE
T ss_pred eeehhhhHHHHHHHHhCCC--------CC-EEcCCCcccc--ccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccce
Confidence 9999988887777777643 22 4568998742 1110 0 0111 112
Q ss_pred cc---cCCch-hhhchhhHHHHHHHHhhc----CCCccEEE---------------------------------------
Q 005365 530 IY---FPYTE-EKRRLKSFHPEIEELLYS----DVENKEHL--------------------------------------- 562 (700)
Q Consensus 530 ~F---~g~~~-~~Kgl~~Ll~Ai~~Ll~~----~~~~~l~i--------------------------------------- 562 (700)
+| .||.+ ..||.+.+++|+..|-.. ..+..++.
T Consensus 294 l~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~ 373 (633)
T PF05693_consen 294 LYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKR 373 (633)
T ss_dssp EEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 22 24443 359999999999887532 22332222
Q ss_pred -------------------------------------------EecCChhhHHHHHHHHHHHHHcCCC----Cc--EEEe
Q 005365 563 -------------------------------------------KESKDLEEQAEMKKMYSLIDQYKLN----GQ--FRWI 593 (700)
Q Consensus 563 -------------------------------------------~g~Gd~ee~~~~~~l~~li~~l~L~----~~--V~fl 593 (700)
.-..+. . +.+-..+.++++. ++ |.|+
T Consensus 374 ~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~-~----DpILn~irr~~L~N~~~drVKVIF~ 448 (633)
T PF05693_consen 374 LFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDS-N----DPILNMIRRLGLFNNPEDRVKVIFH 448 (633)
T ss_dssp HHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTT-T-----HHHHHHHHTT----TT-SEEEEE-
T ss_pred HHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCc-c----CHHHHHHHhCCCCCCCCCceEEEEe
Confidence 111111 1 2334445556663 34 4555
Q ss_pred cc---ccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccccc-----CCeEEEE-C--C
Q 005365 594 SS---QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN-----GKSGYHI-D--P 662 (700)
Q Consensus 594 G~---~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d-----g~~G~lv-~--p 662 (700)
+. ..|.+-+-+.+.++.. +|+.|+||+||++|.|.+|+.++|+|.|+|+..|..-.+.+ ...|+.| + .
T Consensus 449 P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~ 527 (633)
T PF05693_consen 449 PEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRD 527 (633)
T ss_dssp -S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSS
T ss_pred eccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCC
Confidence 42 1233434567788886 99999999999999999999999999999999998765553 3456554 2 3
Q ss_pred CCHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHH
Q 005365 663 YHGEQAAEILVDFFEK-CKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 663 ~D~eaLAeaI~~ll~~-~~~dp~~~~~ms~~ar~ra 697 (700)
.+.++.+++|.+.+.+ |..++..+..++.++.+.+
T Consensus 528 ~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS 563 (633)
T PF05693_consen 528 KNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLS 563 (633)
T ss_dssp S-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4666666666655544 4567777777777776544
No 99
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.27 E-value=2.5e-11 Score=114.68 Aligned_cols=146 Identities=14% Similarity=0.203 Sum_probs=79.9
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccc
Q 005365 300 GGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWIS 379 (700)
Q Consensus 300 GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~ls 379 (700)
||.++|+. +|+++|+++||+|+ |+|+..++.. .... ..++.+.++|.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchh------
Confidence 79999999 67777899999999 9986644321 1111 23688888887654210
Q ss_pred cccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccch
Q 005365 380 RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHF 459 (700)
Q Consensus 380 r~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~ 459 (700)
...+. +...+.+.+ .....+||+||+|.+..++++.++++..++|+|++.|+...... ..|.. .+
T Consensus 54 -~~~~~----~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~-----~~ 118 (160)
T PF13579_consen 54 -LRLLR----FLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKR-----RL 118 (160)
T ss_dssp -GGHCC----HHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH-----HH
T ss_pred -hhhHH----HHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchhh-----HH
Confidence 01111 112223333 22345899999998766667766665789999999998542221 12211 11
Q ss_pred hhhhhHHHHHHhhCCEEEecCHHHHHhhhh
Q 005365 460 SCQFTADLIAMNHTDFIITSTFQEIAGSKD 489 (700)
Q Consensus 460 ~~~~~~E~~al~~AD~IIt~S~~~~~~~k~ 489 (700)
.. ..++..++.||.|+++|+..++.+.+
T Consensus 119 ~~--~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 119 YR--WLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp HH--HHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred HH--HHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 12 23778899999999999777665444
No 100
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.23 E-value=1.1e-10 Score=112.23 Aligned_cols=166 Identities=17% Similarity=0.245 Sum_probs=85.8
Q ss_pred CCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCccccccc
Q 005365 297 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRK 376 (700)
Q Consensus 297 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~ 376 (700)
+..||.++++. +|+++|+++||+|+ |+|....+..... . .......+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~----~-------~~~~~~~~~~~~------ 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE----L-------VKIFVKIPYPIR------ 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST----E-------EEE---TT-SST------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh----c-------cceeeeeecccc------
Confidence 45699999999 67777799999999 9986654432111 0 011111111110
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccc--cCCCCchhhhhcc
Q 005365 377 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKT--KYPDSDIYWKNLD 454 (700)
Q Consensus 377 ~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~--~~~~~~~~w~~~~ 454 (700)
....+.......+.+.+.+. +|||||+|.+.....+....+ ++|.|.+.|+.... ..... .|
T Consensus 60 -----~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~--~~---- 123 (177)
T PF13439_consen 60 -----KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSK--LS---- 123 (177)
T ss_dssp -----SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTS--CC----
T ss_pred -----cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccc--cc----
Confidence 01111122334455566666 899999988665544444444 99999999987631 10000 00
Q ss_pred cccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccc
Q 005365 455 DKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 531 (700)
Q Consensus 455 ~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F 531 (700)
.+.... ...+....+.+|.+|++|...++.+.+ ++ ++ ..++.+|+||+|+..|
T Consensus 124 -~~~~~~-~~~~~~~~~~~~~ii~vS~~~~~~l~~-~~-------------------~~--~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 124 -PYSYLN-FRIERKLYKKADRIIAVSESTKDELIK-FG-------------------IP--PEKIHVIYNGIDTDRF 176 (177)
T ss_dssp -CHHHHH-HCTTHHHHCCSSEEEESSHHHHHHHHH-HT-----------------------SS-EEE----B-CCCH
T ss_pred -hhhhhh-hhhhhhHHhcCCEEEEECHHHHHHHHH-hC-------------------Cc--ccCCEEEECCccHHHc
Confidence 000000 111334578999999999877765555 43 22 4577788888887766
No 101
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.18 E-value=3.7e-09 Score=117.98 Aligned_cols=187 Identities=13% Similarity=0.080 Sum_probs=131.1
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccccCCchhhhchhhHHHHHHH
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEE 550 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~ 550 (700)
++.|.||++|+++.+.+++++.. ....+..|.-+. ++ ++ +-+ ......+.++ ....+++++.
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~--~~~~~~ip~g~i-~~-~~----~~~---r~~~~~l~~t-------~s~~I~~i~~ 299 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN--EYQEQISQLGYL-YP-FK----KDN---KYRKQALILT-------NSDQIEHLEE 299 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc--ccCceEEEEEEE-Ee-ec----ccc---CCcccEEEEC-------CHHHHHHHHH
Confidence 67899999998888877777753 122233333332 11 10 000 0111122222 1678899999
Q ss_pred HhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHH
Q 005365 551 LLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVV 630 (700)
Q Consensus 551 Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vl 630 (700)
|....|+..++| |.++.-. .+|.++ +++ ++-+.+.|+.+ ..+-..+.. ||+++-.|..|+|++++.
T Consensus 300 Lv~~lPd~~f~I-ga~te~s----~kL~~L-~~y--~nvvly~~~~~-----~~l~~ly~~-~dlyLdin~~e~~~~al~ 365 (438)
T TIGR02919 300 IVQALPDYHFHI-AALTEMS----SKLMSL-DKY--DNVKLYPNITT-----QKIQELYQT-CDIYLDINHGNEILNAVR 365 (438)
T ss_pred HHHhCCCcEEEE-EecCccc----HHHHHH-Hhc--CCcEEECCcCh-----HHHHHHHHh-ccEEEEccccccHHHHHH
Confidence 999999999999 6664411 456666 555 67677777443 245566665 999999999999999999
Q ss_pred HHHHcCCCEEEcC-CCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 631 EAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 631 EAMA~GlPVVAT~-~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
||++.|+|||+.+ .-|+.+++.+ |.+++.+|+++|+++|.+++ .||+.+++.-..-++.
T Consensus 366 eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL----~d~~~~~~~~~~q~~~ 425 (438)
T TIGR02919 366 RAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL----NDPNQFRELLEQQREH 425 (438)
T ss_pred HHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHH
Confidence 9999999999985 4567788866 88999999999999999998 8997777654444443
No 102
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.13 E-value=2.2e-10 Score=100.05 Aligned_cols=80 Identities=21% Similarity=0.362 Sum_probs=75.0
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
+++.|+..++++..++|+||||+|||+++.++..+++.+|..++.++ |+++++++|..++ +||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 45779989999999999999999999999999999999999999998 9999999999998 89999999999999
Q ss_pred HHHHhC
Q 005365 695 KRIEEK 700 (700)
Q Consensus 695 ~ra~e~ 700 (700)
+++.++
T Consensus 75 ~~v~~~ 80 (92)
T PF13524_consen 75 ERVLKR 80 (92)
T ss_pred HHHHHh
Confidence 999853
No 103
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=99.09 E-value=3.2e-09 Score=104.43 Aligned_cols=165 Identities=19% Similarity=0.209 Sum_probs=107.9
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEec
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~ 355 (700)
|.||+|+...|.|.. .||.|+++. +|+..|+++||+|+ |.|+...... .. .
T Consensus 1 mkkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~~---~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------KE---F 51 (185)
T ss_pred CceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------CC---c
Confidence 358999999999853 599999999 88888999999999 9998643211 11 1
Q ss_pred CccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHH-----HcCCCCeEEEEcCCC-chHHHHHHHH--hc
Q 005365 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAK-----ELQGKPDLIIGNYSD-GNIVASLLAH--KL 427 (700)
Q Consensus 356 ~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~-----~~~~~pDlIh~h~~~-~~lva~lla~--~~ 427 (700)
.-.+++++.+|.....+ +..+..++...+.. .-..+.|+||.+... ++++..++.+ +.
T Consensus 52 ~y~gv~l~~i~~~~~g~--------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~ 117 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKK 117 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhc
Confidence 12368899988765321 11222222221111 111257899987655 5555554443 34
Q ss_pred CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhc
Q 005365 428 GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVG 492 (700)
Q Consensus 428 giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~ 492 (700)
|+|++++.|++++.+ .+|.....+|. ...|+.+.+.||.+|+-|....+-+++.++
T Consensus 118 g~~v~vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~y~ 173 (185)
T PF09314_consen 118 GGKVVVNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKERYG 173 (185)
T ss_pred CCcEEECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHHcC
Confidence 779999999997665 46665544442 335889999999999999666554444443
No 104
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.02 E-value=4.9e-07 Score=98.53 Aligned_cols=308 Identities=14% Similarity=0.088 Sum_probs=167.6
Q ss_pred cCcchhhhHHHHHHHHHHHHHHHHHCCCc-eeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCccc--ccc
Q 005365 299 TGGQVVYILDQVRALEDEMLLRIKQQGLD-ITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKG--VVR 375 (700)
Q Consensus 299 ~GG~~vyvld~araL~~eLa~~L~~~Ghe-V~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~--~~~ 375 (700)
|||-..-.+ -++++|.++|++ |. ++.....- .+......++.+..++.....+ .++
T Consensus 10 TGGHv~pAl--------Al~~~l~~~g~~~v~----~~~~~~~~---------e~~l~~~~~~~~~~I~~~~~~~~~~~~ 68 (357)
T COG0707 10 TGGHVFPAL--------ALAEELAKRGWEQVI----VLGTGDGL---------EAFLVKQYGIEFELIPSGGLRRKGSLK 68 (357)
T ss_pred CccchhHHH--------HHHHHHHhhCccEEE----Eecccccc---------eeeeccccCceEEEEecccccccCcHH
Confidence 577555545 678889999996 44 44222110 0111111245666666554322 111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhccc
Q 005365 376 KWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDD 455 (700)
Q Consensus 376 ~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~ 455 (700)
++.+- -++......+.+.+++. +||+|++........+.++++.+|+|+++.-.+.... ..|+
T Consensus 69 ~~~~~----~~~~~~~~~a~~il~~~---kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G------~ank---- 131 (357)
T COG0707 69 LLKAP----FKLLKGVLQARKILKKL---KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPG------LANK---- 131 (357)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHc---CCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcc------hhHH----
Confidence 10000 11222233444555555 9999999777777778888999999998866654222 2232
Q ss_pred ccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcce----ecC----CCCc
Q 005365 456 KYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN----IVS----PGAD 527 (700)
Q Consensus 456 ~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~----vIp----~G~d 527 (700)
+..+.|+.|.+.-... ..+. +.-..+.-|+++..+-.. .++ .+..
T Consensus 132 ------------~~~~~a~~V~~~f~~~--------~~~~-------~~~~~~~tG~Pvr~~~~~~~~~~~~~~~~~~~~ 184 (357)
T COG0707 132 ------------ILSKFAKKVASAFPKL--------EAGV-------KPENVVVTGIPVRPEFEELPAAEVRKDGRLDKK 184 (357)
T ss_pred ------------HhHHhhceeeeccccc--------cccC-------CCCceEEecCcccHHhhccchhhhhhhccCCCc
Confidence 2244466655544211 1110 000111223332111111 000 1233
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCC-ccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVE-NKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~-~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
+.+.+|... |...+-+++.++.....+ ..++ .-.|... .+++++.-.+++. ++..++.+ +|.
T Consensus 185 ~ilV~GGS~---Ga~~ln~~v~~~~~~l~~~~~v~-~~~G~~~----~~~~~~~~~~~~~---~~v~~f~~------dm~ 247 (357)
T COG0707 185 TILVTGGSQ---GAKALNDLVPEALAKLANRIQVI-HQTGKND----LEELKSAYNELGV---VRVLPFID------DMA 247 (357)
T ss_pred EEEEECCcc---hhHHHHHHHHHHHHHhhhCeEEE-EEcCcch----HHHHHHHHhhcCc---EEEeeHHh------hHH
Confidence 444444433 333333444433333222 2222 2233321 2344444444444 78887654 478
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--------cccccccCCeEEEECCCC--HHHHHHHHHHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYHIDPYH--GEQAAEILVDFF 676 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG--------~~EiI~dg~~G~lv~p~D--~eaLAeaI~~ll 676 (700)
++|+. +|+.|.=+ =++|+-|..++|+|+|--.... .+..+++...|..++..+ ++.+++.|.+++
T Consensus 248 ~~~~~-ADLvIsRa----Ga~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~ 322 (357)
T COG0707 248 ALLAA-ADLVISRA----GALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL 322 (357)
T ss_pred HHHHh-ccEEEeCC----cccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHh
Confidence 88886 99998864 3689999999999999864332 234445555677776544 889999999998
Q ss_pred HhccCCHHHHHHHHHHHHHHH
Q 005365 677 EKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 677 ~~~~~dp~~~~~ms~~ar~ra 697 (700)
++|+..++|++++++..
T Consensus 323 ----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 323 ----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred ----cCHHHHHHHHHHHHhcC
Confidence 89999999999988753
No 105
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=98.92 E-value=1.5e-07 Score=106.24 Aligned_cols=270 Identities=13% Similarity=0.065 Sum_probs=148.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+.-.+++..+.++. +.++.+-.|..++.. .. ++...+...-...|-.||.|-..++..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~-----e~-------fr~lP~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSS-----EI-------FRCLPWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----H-----HH-------HTTSTTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCH-----HH-------HhhCCcHHHHHHHhhcCCEEEEecHHH
Confidence 56999999988888887777664 568888888765433 11 111112212234677899999999887
Q ss_pred HHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccc-----------------------------cccCC
Q 005365 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMS-----------------------------IYFPY 534 (700)
Q Consensus 484 ~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~-----------------------------~F~g~ 534 (700)
..-+.......-... .....-.+.++|- .-++.+.|-|+|.. +=+.+
T Consensus 209 ~~nFl~~~~r~lg~~-~~~~~~~v~~~Gr---~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDr 284 (474)
T PF00982_consen 209 ARNFLSCCKRLLGLE-VDSDRGTVEYNGR---RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDR 284 (474)
T ss_dssp HHHHHHHHHHHS-EE-EEETTE-EEETTE---EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--
T ss_pred HHHHHHHHHHHcCCc-ccCCCceEEECCE---EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 654433332211000 0000000111111 00122233333322 22345
Q ss_pred chhhhchhhHHHHHHHHhhcCCCc--cEEE--EecCChh----hHHHHHHHHHHHHHc----CCCC--cEEEeccccCcC
Q 005365 535 TEEKRRLKSFHPEIEELLYSDVEN--KEHL--KESKDLE----EQAEMKKMYSLIDQY----KLNG--QFRWISSQMNRV 600 (700)
Q Consensus 535 ~~~~Kgl~~Ll~Ai~~Ll~~~~~~--~l~i--~g~Gd~e----e~~~~~~l~~li~~l----~L~~--~V~flG~~~d~v 600 (700)
++..||+..-+.|++.++...|+. ++++ +....+. .....+++.+++.+. |-.+ -|.++- ..+
T Consensus 285 ld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~ 361 (474)
T PF00982_consen 285 LDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIY---RSL 361 (474)
T ss_dssp B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE----S--
T ss_pred chhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEe---cCC
Confidence 677799999999999999988764 2333 2222211 223344455554443 3222 366665 357
Q ss_pred ChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC----EEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 601 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 601 ~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP----VVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+.++++.+|+. ||+++.+|..+|+.++..|+.+|..+ +|.|...|.++.+.+ ..++|+|.|.+++|++|.+.+
T Consensus 362 ~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL 438 (474)
T PF00982_consen 362 SFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSE--AALLVNPWDIEEVADAIHEAL 438 (474)
T ss_dssp -HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCC--ccEEECCCChHHHHHHHHHHH
Confidence 78999999997 99999999999999999999999876 777888888888854 348999999999999999998
Q ss_pred HhccCCHHHHHHHHHHHHHHHHh
Q 005365 677 EKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 677 ~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+ ..++.++..-+.-++.+.+
T Consensus 439 ~---M~~~Er~~r~~~~~~~v~~ 458 (474)
T PF00982_consen 439 T---MPPEERKERHARLREYVRE 458 (474)
T ss_dssp T-----HHHHHHHHHHHHHHHHH
T ss_pred c---CCHHHHHHHHHHHHHHhHh
Confidence 4 5667777766666666654
No 106
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.91 E-value=4.3e-09 Score=109.15 Aligned_cols=185 Identities=12% Similarity=0.073 Sum_probs=99.1
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCc-cceeEe--
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-QRLEKV-- 354 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~-~~~e~i-- 354 (700)
||+++|....|- -.+||...++- .|+++|+++||+|. |+++.++........ ......
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999988652 36799999999 56666799999999 999875321111000 000000
Q ss_pred --------c----------CccceEEEEecCCCcccccccccccccch-----------hhHHHHHHHHHHHHHHHcCCC
Q 005365 355 --------Y----------GTKYSDILRVPFRTEKGVVRKWISRFEVW-----------PYLETYTEDVAVEIAKELQGK 405 (700)
Q Consensus 355 --------~----------~~~~v~I~rvp~~~~~~~~~~~lsr~~i~-----------~~l~~f~~~~~~~l~~~~~~~ 405 (700)
. ..+++.++-+.... +.+|..++ .....|+..+...+. .++.+
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~-~l~~~ 133 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELLK-KLGWK 133 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHC-TCT-S
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHHH-hhCCC
Confidence 0 00234444333221 11122222 112223333333333 34458
Q ss_pred CeEEEEcCCCchHHHHHHHHhc-------CCcEEEEecCCccccCCC------Cchhhhh--cccccchhhhhhHHHHHH
Q 005365 406 PDLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYPD------SDIYWKN--LDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 406 pDlIh~h~~~~~lva~lla~~~-------giP~V~t~H~l~~~~~~~------~~~~w~~--~~~~y~~~~~~~~E~~al 470 (700)
|||||+|.|.+++++.++.... ++|+|+|+|++....... .+..|.. ....+.+...+...+..+
T Consensus 134 pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi 213 (245)
T PF08323_consen 134 PDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGI 213 (245)
T ss_dssp -SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHH
T ss_pred CCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHH
Confidence 9999999999999999888765 599999999975442111 1112211 011122222333456789
Q ss_pred hhCCEEEecCHHHHHhhhh
Q 005365 471 NHTDFIITSTFQEIAGSKD 489 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~ 489 (700)
..||.|+|+|+..++.+..
T Consensus 214 ~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 214 VYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp HHSSEEEESSHHHHHHTTS
T ss_pred HhcCEeeeCCHHHHHHHhC
Confidence 9999999999887764433
No 107
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=98.84 E-value=1.4e-06 Score=95.20 Aligned_cols=77 Identities=13% Similarity=0.057 Sum_probs=54.7
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC-----C----cccccccCCeEEEECC--CCHHHHHHH
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-----G----PAEIIVNGKSGYHIDP--YHGEQAAEI 671 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G-----G----~~EiI~dg~~G~lv~p--~D~eaLAea 671 (700)
+++..+|+. ||++|.-+ -+.|+.|++++|+|.|..... + ..+.+.+...|..+.. -+++.++++
T Consensus 244 ~~m~~~~~~-adlvIsr~----G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~ 318 (352)
T PRK12446 244 GELPDILAI-TDFVISRA----GSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKH 318 (352)
T ss_pred hhHHHHHHh-CCEEEECC----ChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHH
Confidence 467788886 99988863 478999999999999987432 1 2234444445666543 357889999
Q ss_pred HHHHHHhccCCHHHHHH
Q 005365 672 LVDFFEKCKADPSYWDK 688 (700)
Q Consensus 672 I~~ll~~~~~dp~~~~~ 688 (700)
+.+++ .|++.+++
T Consensus 319 l~~ll----~~~~~~~~ 331 (352)
T PRK12446 319 VEELS----HNNEKYKT 331 (352)
T ss_pred HHHHH----cCHHHHHH
Confidence 99887 78766543
No 108
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.79 E-value=2.8e-07 Score=102.10 Aligned_cols=93 Identities=19% Similarity=0.118 Sum_probs=65.3
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv 660 (700)
.++++|.+.++ ++..+++ . .+|++|.- +-..++.||+++|+|+|.....+ .++.++....|..+
T Consensus 285 ~~~~~v~~~~~----~p~~~ll---~-~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l 352 (401)
T cd03784 285 DLPDNVRVVDF----VPHDWLL---P-RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL 352 (401)
T ss_pred CCCCceEEeCC----CCHHHHh---h-hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC
Confidence 35678999984 4455554 4 49999965 23479999999999999987665 34555555678777
Q ss_pred CCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 661 DPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 661 ~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
++. +++++++++.+++ ++ ..+++..+.+.
T Consensus 353 ~~~~~~~~~l~~al~~~l----~~-~~~~~~~~~~~ 383 (401)
T cd03784 353 DPRELTAERLAAALRRLL----DP-PSRRRAAALLR 383 (401)
T ss_pred CcccCCHHHHHHHHHHHh----CH-HHHHHHHHHHH
Confidence 665 6899999999987 54 44444444433
No 109
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.75 E-value=2e-07 Score=87.27 Aligned_cols=123 Identities=22% Similarity=0.213 Sum_probs=78.8
Q ss_pred HHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHH
Q 005365 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA 395 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~ 395 (700)
++++.|+++|++|+ |+|...... .....+++.+++++.... ...+++. + ..+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~~----------~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~-~~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDYE----------KYEIIEGIKVIRLPSPRK-----------SPLNYIK-Y-FRLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCch----------hhhHhCCeEEEEecCCCC-----------ccHHHHH-H-HHHH
Confidence 56667799999999 998732210 111123677888764421 1344443 2 2455
Q ss_pred HHHHHHcCCCCeEEEEcCCCc-hHHHHHHHHhcC-CcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhC
Q 005365 396 VEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLG-VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 473 (700)
Q Consensus 396 ~~l~~~~~~~pDlIh~h~~~~-~lva~lla~~~g-iP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~A 473 (700)
+.+.+. +||+||+|...+ ++++.++++..+ +|++++.|+..... ... .. .+..+ ..+.++++|
T Consensus 68 k~ik~~---~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~~-~~-------~~~~~--~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIKKE---KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SSK-KK-------KLKKF--IIKFAFKRA 132 (139)
T ss_pred HHhccC---CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CCc-hH-------HHHHH--HHHHHHHhC
Confidence 555554 899999999776 778888888888 99999999864422 110 10 01111 255789999
Q ss_pred CEEEecC
Q 005365 474 DFIITST 480 (700)
Q Consensus 474 D~IIt~S 480 (700)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999875
No 110
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=98.75 E-value=1e-06 Score=98.61 Aligned_cols=271 Identities=13% Similarity=-0.006 Sum_probs=167.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
.-|+|..|.+.-.+++..+.++. ..++.+-.|..++..-.....+| ...-...|-.+|.|=.-|...
T Consensus 123 ~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~------------r~eil~glL~aDlIGFqt~~y 190 (474)
T PRK10117 123 DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPP------------HDELLEQLCDYDLLGFQTEND 190 (474)
T ss_pred CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCC------------hHHHHHHHHhCccceeCCHHH
Confidence 34899999988888887776553 45777778876443311111112 111234577899999999877
Q ss_pred HHhhhhhhcccc-----ccccccCC----CeEEeecCCCCCCCcceec---------------CCCCccccccCCchhhh
Q 005365 484 IAGSKDTVGQYE-----SHTAFTLP----GLYRVVHGIDVFDPKFNIV---------------SPGADMSIYFPYTEEKR 539 (700)
Q Consensus 484 ~~~~k~~~~~y~-----~~~~~~~p----~l~~v~nGId~~~~k~~vI---------------p~G~d~~~F~g~~~~~K 539 (700)
..-+.+...... ........ .+...+-|||. ..+.-. -.|....+=+.|++..|
T Consensus 191 ~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~--~~~~~~a~~~~~~~~~~lr~~~~~~~lilgVDRLDytK 268 (474)
T PRK10117 191 RLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEP--DEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSK 268 (474)
T ss_pred HHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcH--HHHHHHhhchHHHHHHHHHHHcCCCeEEEEeccccccc
Confidence 654433332110 00000000 01122334441 111100 01111122223667779
Q ss_pred chhhHHHHHHHHhhcCCCc--cEEE--EecCChhh----HHHHHHHHHHHHHcCC----CC--cEEEeccccCcCChhHH
Q 005365 540 RLKSFHPEIEELLYSDVEN--KEHL--KESKDLEE----QAEMKKMYSLIDQYKL----NG--QFRWISSQMNRVRNGEL 605 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~--~l~i--~g~Gd~ee----~~~~~~l~~li~~l~L----~~--~V~flG~~~d~v~~~el 605 (700)
|+..=+.|++.++..+|+. ++++ +....+.+ .....++.+++.+.|- .+ -|+++- ..++.+++
T Consensus 269 Gi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l 345 (474)
T PRK10117 269 GLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLN---QHFDRKLL 345 (474)
T ss_pred CHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEec---CCCCHHHH
Confidence 9999999999999988764 2222 22332222 2333444444444332 22 144443 46788999
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCC-----CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhcc
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCK 680 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-----PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~ 680 (700)
..+|+. |||++..+.-+|+.++..|+.||-. ++|.|...|.++.+. ..++|+|.|.+++|++|.+.++
T Consensus 346 ~alyr~-ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~--- 418 (474)
T PRK10117 346 MKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALT--- 418 (474)
T ss_pred HHHHHh-ccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhC---CCeEECCCCHHHHHHHHHHHHc---
Confidence 999996 9999999999999999999999976 378899988888884 3789999999999999999984
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 005365 681 ADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 681 ~dp~~~~~ms~~ar~ra~e 699 (700)
..++.+++--+.-++.+.+
T Consensus 419 Mp~~Er~~R~~~l~~~v~~ 437 (474)
T PRK10117 419 MPLAERISRHAEMLDVIVK 437 (474)
T ss_pred CCHHHHHHHHHHHHHHhhh
Confidence 5666666666666666543
No 111
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.69 E-value=4.6e-06 Score=92.65 Aligned_cols=254 Identities=19% Similarity=0.182 Sum_probs=135.8
Q ss_pred CCCCeEEEEcCCCchHHHHHHHHhcCCcEEE-EecCCccccCCCCchhhhhcccccchh------hhhhHHHHHHhhCCE
Q 005365 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYHFS------CQFTADLIAMNHTDF 475 (700)
Q Consensus 403 ~~~pDlIh~h~~~~~lva~lla~~~giP~V~-t~H~l~~~~~~~~~~~w~~~~~~y~~~------~~~~~E~~al~~AD~ 475 (700)
.++||+|.+ .+++++.++|+..|+|+++ -.|-... +..+...|. ....|+-. -| ..-+..-+.||.
T Consensus 91 ~~~p~~v~~---~Gg~v~~~aA~~~~~p~~~~~~~esn~--~~~~~~~~~-~~~~~~~~~G~~~~p~-e~n~l~~~~a~~ 163 (396)
T TIGR03492 91 AKKGDLIVA---VGDIVPLLFAWLSGKPYAFVGTAKSDY--YWESGPRRS-PSDEYHRLEGSLYLPW-ERWLMRSRRCLA 163 (396)
T ss_pred hhcCCEEEE---ECcHHHHHHHHHcCCCceEEEeeccce--eecCCCCCc-cchhhhccCCCccCHH-HHHHhhchhhCE
Confidence 348999998 4556678888889999876 2342211 101111111 01111110 01 112344567898
Q ss_pred EEecCHHHHHhhhhhhccccccccc-cCCCeEEeecCCCCCCCcceecCCCCccccccCCc---hhhhchhhHHHHHHHH
Q 005365 476 IITSTFQEIAGSKDTVGQYESHTAF-TLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYT---EEKRRLKSFHPEIEEL 551 (700)
Q Consensus 476 IIt~S~~~~~~~k~~~~~y~~~~~~-~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F~g~~---~~~Kgl~~Ll~Ai~~L 551 (700)
|.+......+.++ ++.....+ +.|-.- .+.. ..+. -++++....+..|-. +..+.+..++++++.+
T Consensus 164 v~~~~~~t~~~l~----~~g~k~~~vGnPv~d----~l~~-~~~~-~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L 233 (396)
T TIGR03492 164 VFVRDRLTARDLR----RQGVRASYLGNPMMD----GLEP-PERK-PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEAL 233 (396)
T ss_pred EeCCCHHHHHHHH----HCCCeEEEeCcCHHh----cCcc-cccc-ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHH
Confidence 8888866554332 22111111 111000 0000 0000 011122223333322 2235667888999888
Q ss_pred hhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC--------------CcEEEeccccCcCChhHHHHHHHccCcEEE
Q 005365 552 LYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN--------------GQFRWISSQMNRVRNGELYRYICDTKGAFV 617 (700)
Q Consensus 552 l~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~--------------~~V~flG~~~d~v~~~el~~~la~~aDvfV 617 (700)
... ++..+++...++... +.+.+..++.+.. +++.++.+ ..++..+++. ||++|
T Consensus 234 ~~~-~~~~~v~~~~~~~~~----~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~l~~-ADlvI 301 (396)
T TIGR03492 234 PDS-QPFVFLAAIVPSLSL----EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG------RGAFAEILHW-ADLGI 301 (396)
T ss_pred hhC-CCeEEEEEeCCCCCH----HHHHHHHHhcCceecCCccccchhhccCceEEEec------hHhHHHHHHh-CCEEE
Confidence 654 455554444333221 3344444444442 22555442 2467888886 99999
Q ss_pred eCCCCCCccHHHHHHHHcCCCEEEcCCCCc---cccccc-----CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 618 QPALYEAFGLTVVEAMTCGLPTFATCKGGP---AEIIVN-----GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 618 ~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~---~EiI~d-----g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
..| |.+..|++++|+|+|.....+. ..+.+. | .+..+...+++.+++++.+++ +|++.+++|
T Consensus 302 ~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g-~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~ 371 (396)
T TIGR03492 302 AMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLG-GSVFLASKNPEQAAQVVRQLL----ADPELLERC 371 (396)
T ss_pred ECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcC-CEEecCCCCHHHHHHHHHHHH----cCHHHHHHH
Confidence 985 5666999999999999874333 122222 3 344555678899999999998 899988888
Q ss_pred HHHHHH
Q 005365 690 SLGGLK 695 (700)
Q Consensus 690 s~~ar~ 695 (700)
.+++++
T Consensus 372 ~~~~~~ 377 (396)
T TIGR03492 372 RRNGQE 377 (396)
T ss_pred HHHHHH
Confidence 854443
No 112
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=98.55 E-value=1.6e-05 Score=88.89 Aligned_cols=270 Identities=13% Similarity=0.072 Sum_probs=167.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcC-CcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLG-VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~g-iP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
+=|+|..|.+.-.+++..+..+.. .++.+..|..++..- .++...+...-...+-.||.|=..++..
T Consensus 147 ~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssE------------vfr~lP~r~eIl~gll~~dligFqt~~y 214 (486)
T COG0380 147 PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSE------------VFRCLPWREEILEGLLGADLIGFQTESY 214 (486)
T ss_pred CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHH------------HHhhCchHHHHHHHhhcCCeeEecCHHH
Confidence 349999999888888777776543 477788887655441 1122222222234577899999998877
Q ss_pred HHhhhhhhccccc---cccccCC-------CeEEeecCCCCCCCccee-----------------cCCCCccccccCCch
Q 005365 484 IAGSKDTVGQYES---HTAFTLP-------GLYRVVHGIDVFDPKFNI-----------------VSPGADMSIYFPYTE 536 (700)
Q Consensus 484 ~~~~k~~~~~y~~---~~~~~~p-------~l~~v~nGId~~~~k~~v-----------------Ip~G~d~~~F~g~~~ 536 (700)
+.-+-+...+... ......+ .....+-|||+ +.+.- ..++....+=+-|++
T Consensus 215 ~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~--~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlD 292 (486)
T COG0380 215 ARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDP--EEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLD 292 (486)
T ss_pred HHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCH--HHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcc
Confidence 6555444432210 0000111 12223345552 11110 001111222234567
Q ss_pred hhhchhhHHHHHHHHhhcCCCc--cEEE--EecCChhhHH----HHHHHHHHHHHcC-CCCc-----EEEeccccCcCCh
Q 005365 537 EKRRLKSFHPEIEELLYSDVEN--KEHL--KESKDLEEQA----EMKKMYSLIDQYK-LNGQ-----FRWISSQMNRVRN 602 (700)
Q Consensus 537 ~~Kgl~~Ll~Ai~~Ll~~~~~~--~l~i--~g~Gd~ee~~----~~~~l~~li~~l~-L~~~-----V~flG~~~d~v~~ 602 (700)
..||+..=+.|+++|+..+|+. ++++ +.....++.+ ...++.+++.+.+ .-+. |.|+- ..++.
T Consensus 293 y~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~---~~~~~ 369 (486)
T COG0380 293 YSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLH---RDLDR 369 (486)
T ss_pred cccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEe---ccCCH
Confidence 7799999999999999887764 2222 3333333322 3344444444432 1222 44443 35778
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC----CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHh
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl----PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~ 678 (700)
++++.+++. +|+++..++-+|+.++..|+-||-- |.|-|...|.+..+.+ .++++|.|.+++|++|...+.
T Consensus 370 ~~l~al~~~-aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVNP~d~~~va~ai~~AL~- 444 (486)
T COG0380 370 NELLALYRA-ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVNPWDTKEVADAIKRALT- 444 (486)
T ss_pred HHHHHHHhh-hceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeECCCChHHHHHHHHHHhc-
Confidence 999999996 9999999999999999999999854 7888888888777744 799999999999999999984
Q ss_pred ccCCHHHHHHHHHHHHHHHH
Q 005365 679 CKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 679 ~~~dp~~~~~ms~~ar~ra~ 698 (700)
..++.+++.-+.-++.+.
T Consensus 445 --m~~eEr~~r~~~~~~~v~ 462 (486)
T COG0380 445 --MSLEERKERHEKLLKQVL 462 (486)
T ss_pred --CCHHHHHHHHHHHHHHHH
Confidence 566665555555555544
No 113
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.52 E-value=1.3e-05 Score=96.37 Aligned_cols=269 Identities=13% Similarity=0.070 Sum_probs=165.3
Q ss_pred eEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHH
Q 005365 407 DLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIA 485 (700)
Q Consensus 407 DlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~ 485 (700)
|+|..|.+.-.+++..+.++. ..++.+-.|..++..- .|+...+...-...|-.||.|=..+...+.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e------------ifr~LP~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE------------IYKTLPIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH------------HHhhCCcHHHHHHHHhcCCeEEecCHHHHH
Confidence 899999998888887776654 4688888887654431 122222222233567789999999987765
Q ss_pred hhhhhhcc-----cccccc---ccCC----CeEEeecCCCCCCCcceec-----------------C-CCCccccccCCc
Q 005365 486 GSKDTVGQ-----YESHTA---FTLP----GLYRVVHGIDVFDPKFNIV-----------------S-PGADMSIYFPYT 535 (700)
Q Consensus 486 ~~k~~~~~-----y~~~~~---~~~p----~l~~v~nGId~~~~k~~vI-----------------p-~G~d~~~F~g~~ 535 (700)
-+...... |....+ .... .+...+-||+. ..+.-. . .|....+=+.++
T Consensus 271 ~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrl 348 (854)
T PLN02205 271 HFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHM--GQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDM 348 (854)
T ss_pred HHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcH--HHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCc
Confidence 44332221 111100 0000 01122234431 111100 0 011122222355
Q ss_pred hhhhchhhHHHHHHHHhhcCCCc--cEEE--EecCCh----hhHHHHHHHHHHHHHcC----CCC--cEEEeccccCcCC
Q 005365 536 EEKRRLKSFHPEIEELLYSDVEN--KEHL--KESKDL----EEQAEMKKMYSLIDQYK----LNG--QFRWISSQMNRVR 601 (700)
Q Consensus 536 ~~~Kgl~~Ll~Ai~~Ll~~~~~~--~l~i--~g~Gd~----ee~~~~~~l~~li~~l~----L~~--~V~flG~~~d~v~ 601 (700)
+..||+..=+.|++.++..+|+. ++++ +....+ +..+...++.+++.+.+ -.+ -|.++- ..++
T Consensus 349 D~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~ 425 (854)
T PLN02205 349 DIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLID---APLK 425 (854)
T ss_pred ccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCC
Confidence 66789999999999999988875 3333 222222 22233334445554432 222 366664 3678
Q ss_pred hhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC-------------------CEEEcCCCCcccccccCCeEEEECC
Q 005365 602 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-------------------PTFATCKGGPAEIIVNGKSGYHIDP 662 (700)
Q Consensus 602 ~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-------------------PVVAT~~GG~~EiI~dg~~G~lv~p 662 (700)
.+|+..+|+. |||++..+..+|+.++..|+.+|.. .+|.|...|.+..+. ..++|+|
T Consensus 426 ~~e~~aly~~-ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP 501 (854)
T PLN02205 426 FYERVAYYVV-AECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNP 501 (854)
T ss_pred HHHHHHHHHh-ccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhC---cCeEECC
Confidence 8999999996 9999999999999999999999964 377788877777763 3699999
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 663 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 663 ~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
.|.+++|++|.+.+. ..++.++.--+.-++++.+
T Consensus 502 ~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v~~ 535 (854)
T PLN02205 502 WNIDAVADAMDSALE---MAEPEKQLRHEKHYRYVST 535 (854)
T ss_pred CCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHhh
Confidence 999999999999984 5555555555555555543
No 114
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.48 E-value=3.7e-05 Score=85.09 Aligned_cols=91 Identities=23% Similarity=0.295 Sum_probs=64.3
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc----ccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~----~EiI~dg~~G~lv~ 661 (700)
++++|.+.+ +++..++ +. .+|++|..+- ..+++||+++|+|+|+....+- .+.+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~l---l~-~~~~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLEI---LK-KADAFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHHH---Hh-hCCEEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457899988 4444444 45 4999998742 2489999999999999754443 33344555777776
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLG 692 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ 692 (700)
.. ++++++++|.+++ .|+++++++.+-
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l 369 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM 369 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH
Confidence 43 5789999999998 888766665443
No 115
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.41 E-value=0.0001 Score=80.21 Aligned_cols=249 Identities=15% Similarity=0.117 Sum_probs=149.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
+||+.+.--...-..-..-+++.|+|++..---+.. .|...|+.+ ..+ .+..+...|.|++-|+.++
T Consensus 123 ~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~----rS~~~y~k~-------~~~--~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 123 RPKLLIIMETELWPNLINELKRRGIPLVLVNARLSD----RSFARYAKL-------KFL--ARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeech----hhhHHHHHH-------HHH--HHHHHHhcceeeecCHHHH
Confidence 899977744332222334556789998773221111 122233322 111 3356888999999997776
Q ss_pred HhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCC----------------CCccccccCCchhhhchhhHHHHH
Q 005365 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP----------------GADMSIYFPYTEEKRRLKSFHPEI 548 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~----------------G~d~~~F~g~~~~~Kgl~~Ll~Ai 548 (700)
+ ++.+.+ .+.+. .-| .-|+.+.++ +-...++.+ ..+..-+.++++.
T Consensus 190 ~----Rf~~LG------a~~v~--v~G----NlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaS--TH~GEeei~l~~~ 251 (419)
T COG1519 190 Q----RFRSLG------AKPVV--VTG----NLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAS--THEGEEEIILDAH 251 (419)
T ss_pred H----HHHhcC------CcceE--Eec----ceeecCCCChhhHHHHHHHHHhcCCCCceEEEec--CCCchHHHHHHHH
Confidence 4 333222 12211 111 002222221 112222222 1222234577888
Q ss_pred HHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCC------------cEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 549 EELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNG------------QFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 549 ~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~------------~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
..++...++..+.++ .-.+| ..+...+++++.|+.- .=.++| | ..+||..+|.- +|+.
T Consensus 252 ~~l~~~~~~~llIlV--PRHpE--Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~---D--tmGEL~l~y~~-adiA 321 (419)
T COG1519 252 QALKKQFPNLLLILV--PRHPE--RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLG---D--TMGELGLLYGI-ADIA 321 (419)
T ss_pred HHHHhhCCCceEEEe--cCChh--hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEE---e--cHhHHHHHHhh-ccEE
Confidence 999888876544443 33343 3577888888887731 012333 2 36899999996 8865
Q ss_pred Ee-CCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 005365 617 VQ-PALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISL 691 (700)
Q Consensus 617 V~-PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~ 691 (700)
.. -|+.+-=|-.++|+.++|+|||.- +...+.+-+.....|+.|+ |.+.+++++..++ .|++.+++|++
T Consensus 322 FVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~--~~~~l~~~v~~l~----~~~~~r~~~~~ 395 (419)
T COG1519 322 FVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE--DADLLAKAVELLL----ADEDKREAYGR 395 (419)
T ss_pred EECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC--CHHHHHHHHHHhc----CCHHHHHHHHH
Confidence 44 577776678899999999999995 4444445555566788887 5777888777776 88999999999
Q ss_pred HHHHHHHhC
Q 005365 692 GGLKRIEEK 700 (700)
Q Consensus 692 ~ar~ra~e~ 700 (700)
+|...+.++
T Consensus 396 ~~~~~v~~~ 404 (419)
T COG1519 396 AGLEFLAQN 404 (419)
T ss_pred HHHHHHHHh
Confidence 999988753
No 116
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.34 E-value=3.5e-05 Score=82.52 Aligned_cols=113 Identities=14% Similarity=0.177 Sum_probs=72.3
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
..+|+|..... .++++++. .++..+++.|.+..+ .-.++|++.++. ..++.+
T Consensus 195 iLv~~gg~~~~----~~~~~l~~----~~~~~~~v~g~~~~~---------------~~~~ni~~~~~~-----~~~~~~ 246 (318)
T PF13528_consen 195 ILVYFGGGGPG----DLIEALKA----LPDYQFIVFGPNAAD---------------PRPGNIHVRPFS-----TPDFAE 246 (318)
T ss_pred EEEEeCCCcHH----HHHHHHHh----CCCCeEEEEcCCccc---------------ccCCCEEEeecC-----hHHHHH
Confidence 44566655444 34444444 346677777554211 015679988743 256788
Q ss_pred HHHccCcEEEeCCCCCCccHH-HHHHHHcCCCEEEcCCCCccc------ccccCCeEEEECC--CCHHHHHHHHHH
Q 005365 608 YICDTKGAFVQPALYEAFGLT-VVEAMTCGLPTFATCKGGPAE------IIVNGKSGYHIDP--YHGEQAAEILVD 674 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~-vlEAMA~GlPVVAT~~GG~~E------iI~dg~~G~lv~p--~D~eaLAeaI~~ 674 (700)
+|+. ||++|.-+ |.+ +.||+++|+|++.-...+..| .+++-..|..+++ -+++.++++|.+
T Consensus 247 ~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 247 LMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLER 316 (318)
T ss_pred HHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhc
Confidence 8986 99999873 555 999999999999987655333 3334445666553 367888777764
No 117
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.31 E-value=0.00023 Score=78.30 Aligned_cols=85 Identities=16% Similarity=0.307 Sum_probs=66.9
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHH
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~e 666 (700)
.++|++++ +++..++..+++. |+++|--| +..+.||.++|+|||+ .|.-+|.++.|.+++++. .|++
T Consensus 261 ~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdS-----Sggi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~vg-~~~~ 327 (365)
T TIGR03568 261 HPNFRLFK----SLGQERYLSLLKN-ADAVIGNS-----SSGIIEAPSFGVPTIN--IGTRQKGRLRADSVIDVD-PDKE 327 (365)
T ss_pred CCCEEEEC----CCChHHHHHHHHh-CCEEEEcC-----hhHHHhhhhcCCCEEe--ecCCchhhhhcCeEEEeC-CCHH
Confidence 35799999 7778999999997 99998654 2234899999999995 567888888888888884 5899
Q ss_pred HHHHHHHHHHHhccCCHHHHHHH
Q 005365 667 QAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~m 689 (700)
++.+++.+++ +++.++.+
T Consensus 328 ~I~~a~~~~~-----~~~~~~~~ 345 (365)
T TIGR03568 328 EIVKAIEKLL-----DPAFKKSL 345 (365)
T ss_pred HHHHHHHHHh-----ChHHHHHH
Confidence 9999999853 55554444
No 118
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.30 E-value=5e-05 Score=81.85 Aligned_cols=79 Identities=14% Similarity=0.137 Sum_probs=56.5
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccc------ccccCCeEEE
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE------IIVNGKSGYH 659 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~E------iI~dg~~G~l 659 (700)
+.+++.+.++. + +++..+|.. ||++|.-+-+ .++.||+++|+|++.....+..| .+++...|..
T Consensus 227 ~~~~v~~~~~~----~-~~~~~~l~~-ad~vI~~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~ 296 (321)
T TIGR00661 227 YNENVEIRRIT----T-DNFKELIKN-AELVITHGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIA 296 (321)
T ss_pred cCCCEEEEECC----h-HHHHHHHHh-CCEEEECCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEE
Confidence 35678888743 2 568888886 9999998522 47999999999999987765333 4556567888
Q ss_pred ECCCCHHHHHHHHHHH
Q 005365 660 IDPYHGEQAAEILVDF 675 (700)
Q Consensus 660 v~p~D~eaLAeaI~~l 675 (700)
++..+. ++.+++.+.
T Consensus 297 l~~~~~-~~~~~~~~~ 311 (321)
T TIGR00661 297 LEYKEL-RLLEAILDI 311 (321)
T ss_pred cChhhH-HHHHHHHhc
Confidence 887777 444444444
No 119
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=97.98 E-value=0.0022 Score=73.65 Aligned_cols=96 Identities=16% Similarity=0.063 Sum_probs=64.9
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC----CcccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G----G~~EiI~dg~~G~lv~ 661 (700)
++++|.+.+ +++..++..- . .+++||.= |=..++.||+.+|+|+|+.... ..+..++.-..|..++
T Consensus 344 ~p~Nv~i~~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~ 413 (507)
T PHA03392 344 LPANVLTQK----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALD 413 (507)
T ss_pred CCCceEEec----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEec
Confidence 456666666 4555555420 1 26777764 2346899999999999997543 3455555556788876
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
.. +.+++.++|.+++ +||+++++..+-+..
T Consensus 414 ~~~~t~~~l~~ai~~vl----~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 414 TVTVSAAQLVLAIVDVI----ENPKYRKNLKELRHL 445 (507)
T ss_pred cCCcCHHHHHHHHHHHh----CCHHHHHHHHHHHHH
Confidence 53 5688999999988 888887776554433
No 120
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.92 E-value=0.00032 Score=76.55 Aligned_cols=252 Identities=16% Similarity=0.200 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEcC-CCchHHHHHHHHhcCCcEEEEecCC-ccccCCCCchhhhhcccccchhhhhhHHH
Q 005365 390 YTEDVAVEIAKELQGKPDLIIGNY-SDGNIVASLLAHKLGVTQCTIAHAL-EKTKYPDSDIYWKNLDDKYHFSCQFTADL 467 (700)
Q Consensus 390 f~~~~~~~l~~~~~~~pDlIh~h~-~~~~lva~lla~~~giP~V~t~H~l-~~~~~~~~~~~w~~~~~~y~~~~~~~~E~ 467 (700)
....+...+.+. +||+|..+. ....+.+.++|..++||+++ +|+. -......+. .+...+.
T Consensus 55 ~~~~~~~~~~~~---~Pd~Vlv~GD~~~~la~alaA~~~~ipv~H-ieaGlRs~d~~~g~-----~de~~R~-------- 117 (346)
T PF02350_consen 55 AIIELADVLERE---KPDAVLVLGDRNEALAAALAAFYLNIPVAH-IEAGLRSGDRTEGM-----PDEINRH-------- 117 (346)
T ss_dssp HHHHHHHHHHHH---T-SEEEEETTSHHHHHHHHHHHHTT-EEEE-ES-----S-TTSST-----THHHHHH--------
T ss_pred HHHHHHHHHHhc---CCCEEEEEcCCchHHHHHHHHHHhCCCEEE-ecCCCCccccCCCC-----chhhhhh--------
Confidence 334445555555 899998865 45567788899999999665 5543 111111000 1111111
Q ss_pred HHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeec-CCCC-------CCCcc---eec-CCCCc--cccccC
Q 005365 468 IAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDV-------FDPKF---NIV-SPGAD--MSIYFP 533 (700)
Q Consensus 468 ~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n-GId~-------~~~k~---~vI-p~G~d--~~~F~g 533 (700)
.+-+.||.-.++|...++.+.+. |. +.. .++.+-+ ++|. ...++ .+. ....+ ...+.+
T Consensus 118 ~i~~la~lhf~~t~~~~~~L~~~-G~-~~~------rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~ 189 (346)
T PF02350_consen 118 AIDKLAHLHFAPTEEARERLLQE-GE-PPE------RIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHP 189 (346)
T ss_dssp HHHHH-SEEEESSHHHHHHHHHT-T---GG------GEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-
T ss_pred hhhhhhhhhccCCHHHHHHHHhc-CC-CCC------eEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCc
Confidence 23345788888886665433221 11 011 1111110 1110 01111 110 01111 111222
Q ss_pred Cchh--hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc
Q 005365 534 YTEE--KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD 611 (700)
Q Consensus 534 ~~~~--~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~ 611 (700)
.... ......+..+++.+... .+..+++........ ...+.+.++++ ++++++. .+...++..+++.
T Consensus 190 ~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p~~---~~~i~~~l~~~---~~v~~~~----~l~~~~~l~ll~~ 258 (346)
T PF02350_consen 190 VTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNPRG---SDIIIEKLKKY---DNVRLIE----PLGYEEYLSLLKN 258 (346)
T ss_dssp CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-HHH---HHHHHHHHTT----TTEEEE--------HHHHHHHHHH
T ss_pred chhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCchH---HHHHHHHhccc---CCEEEEC----CCCHHHHHHHHhc
Confidence 2211 34566777777777766 455566555433322 23444545444 3899998 6778999999997
Q ss_pred cCcEEEeCCCCCCccHHHH-HHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 612 TKGAFVQPALYEAFGLTVV-EAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 612 ~aDvfV~PS~~E~fGl~vl-EAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
|+++|-=| | .+. ||.++|+|||.- +.|--.+.+..+.+-+ ++ .|++++.++|.+++ .+++.+.++
T Consensus 259 -a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~~~~I~~ai~~~l----~~~~~~~~~ 325 (346)
T PF02350_consen 259 -ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TDPEAIIQAIEKAL----SDKDFYRKL 325 (346)
T ss_dssp -ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SSHHHHHHHHHHHH----H-HHHHHHH
T ss_pred -ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CCHHHHHHHHHHHH----hChHHHHhh
Confidence 88887653 6 677 999999999998 5566677777776555 77 69999999999998 555666665
Q ss_pred H
Q 005365 690 S 690 (700)
Q Consensus 690 s 690 (700)
.
T Consensus 326 ~ 326 (346)
T PF02350_consen 326 K 326 (346)
T ss_dssp H
T ss_pred c
Confidence 4
No 121
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.91 E-value=0.0064 Score=69.04 Aligned_cols=93 Identities=14% Similarity=0.093 Sum_probs=57.5
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEcCC----CCcccccccC-CeEEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVNG-KSGYHI 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT~~----GG~~EiI~dg-~~G~lv 660 (700)
+++.+.+ +++..++.. ..++ ||.= +=-++++||+++|+|+|+-.. ......+.+. ..|+-+
T Consensus 323 ~~~~v~~----w~pQ~~iL~----h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~ 390 (459)
T PLN02448 323 DMGLVVP----WCDQLKVLC----HSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRV 390 (459)
T ss_pred CCEEEec----cCCHHHHhc----cCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEE
Confidence 3566666 555566554 2443 5443 223589999999999999644 3444445442 356665
Q ss_pred C-------CCCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHHH
Q 005365 661 D-------PYHGEQAAEILVDFFEKCKADP-SYWDKISLGGLKR 696 (700)
Q Consensus 661 ~-------p~D~eaLAeaI~~ll~~~~~dp-~~~~~ms~~ar~r 696 (700)
. .-+.+++++++.+++ .++ +..++|++++.+.
T Consensus 391 ~~~~~~~~~~~~~~l~~av~~vl----~~~~~~~~~~r~~a~~~ 430 (459)
T PLN02448 391 KREVGEETLVGREEIAELVKRFM----DLESEEGKEMRRRAKEL 430 (459)
T ss_pred ecccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHHH
Confidence 3 136789999999998 554 3444555555443
No 122
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=97.77 E-value=0.0022 Score=67.95 Aligned_cols=94 Identities=14% Similarity=0.207 Sum_probs=60.8
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCccEEE-EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i-~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
.+.+|.....+....+++++..+ ..+..+.+ .|.+.. . .+++++.++.. .+|++.++. +++.+
T Consensus 174 Li~~GG~d~~~~~~~~l~~l~~~---~~~~~i~vv~G~~~~-~---~~~l~~~~~~~---~~i~~~~~~------~~m~~ 237 (279)
T TIGR03590 174 LVSFGGADPDNLTLKLLSALAES---QINISITLVTGSSNP-N---LDELKKFAKEY---PNIILFIDV------ENMAE 237 (279)
T ss_pred EEEeCCcCCcCHHHHHHHHHhcc---ccCceEEEEECCCCc-C---HHHHHHHHHhC---CCEEEEeCH------HHHHH
Confidence 45566555544344556666543 23344444 444332 2 24555555543 468888843 46788
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCC
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK 644 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~ 644 (700)
+|+. ||++|.+ .|.|+.|++++|+|+|+...
T Consensus 238 lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 238 LMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 8886 9999996 57999999999999998654
No 123
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.64 E-value=0.0036 Score=68.76 Aligned_cols=245 Identities=17% Similarity=0.147 Sum_probs=136.2
Q ss_pred HHHHHHHHHHcCCCCeEEEEc-CCCchHHHHHHHHhcCCc--EEEEec-CCccccCCCCchhhhhcccccchhhhhhHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGN-YSDGNIVASLLAHKLGVT--QCTIAH-ALEKTKYPDSDIYWKNLDDKYHFSCQFTADL 467 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h-~~~~~lva~lla~~~giP--~V~t~H-~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~ 467 (700)
..+.+.+... +||+++.- +++.|+-.....++.|+| +|+-+- ..| .|+.- + -+
T Consensus 72 ~~~~~~~~~~---~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~PqvW---------AWr~~--R---------~~ 128 (373)
T PF02684_consen 72 RKLVERIKEE---KPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYISPQVW---------AWRPG--R---------AK 128 (373)
T ss_pred HHHHHHHHHc---CCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEECCcee---------eeCcc--H---------HH
Confidence 3344444444 99998884 466677666667777877 665322 111 12210 0 11
Q ss_pred HHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC---CCC-----cceecCCCCccccccCCchh--
Q 005365 468 IAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV---FDP-----KFNIVSPGADMSIYFPYTEE-- 537 (700)
Q Consensus 468 ~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~---~~~-----k~~vIp~G~d~~~F~g~~~~-- 537 (700)
..-+..|.+.+.=+.|.+..++ +. ++..|+=+.=+|. ..+ +.. ++.+.....+.|..++
T Consensus 129 ~i~~~~D~ll~ifPFE~~~y~~----~g------~~~~~VGHPl~d~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~E 197 (373)
T PF02684_consen 129 KIKKYVDHLLVIFPFEPEFYKK----HG------VPVTYVGHPLLDEVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSE 197 (373)
T ss_pred HHHHHHhheeECCcccHHHHhc----cC------CCeEEECCcchhhhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHH
Confidence 2345578898888877643222 21 1111110000110 000 011 3444444555554332
Q ss_pred h-hchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 538 K-RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 538 ~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
- +-+..++++++.+....++..+++...... ..+.+.+.....+....+.+.. ++-++.++. ||+.
T Consensus 198 I~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~----~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~m~~-ad~a 264 (373)
T PF02684_consen 198 IKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV----HEELIEEILAEYPPDVSIVIIE--------GESYDAMAA-ADAA 264 (373)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH----HHHHHHHHHHhhCCCCeEEEcC--------CchHHHHHh-Ccch
Confidence 2 345788899999998888887776655422 1123445555554443344332 345778886 9988
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEc-----------------CCCCcccccccCC-e-EEEECCCCHHHHHHHHHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFAT-----------------CKGGPAEIIVNGK-S-GYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT-----------------~~GG~~EiI~dg~-~-G~lv~p~D~eaLAeaI~~ll~ 677 (700)
+..| |.+.+|++.+|+|.|.. +.-|++.++-+.. . =++-+.-+++.+++++..++
T Consensus 265 l~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll- 338 (373)
T PF02684_consen 265 LAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELL- 338 (373)
T ss_pred hhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHh-
Confidence 8875 99999999999999884 2233344432211 0 12223458999999999998
Q ss_pred hccCCHHHHHHHHHH
Q 005365 678 KCKADPSYWDKISLG 692 (700)
Q Consensus 678 ~~~~dp~~~~~ms~~ 692 (700)
.|++.++.....
T Consensus 339 ---~~~~~~~~~~~~ 350 (373)
T PF02684_consen 339 ---ENPEKRKKQKEL 350 (373)
T ss_pred ---cCHHHHHHHHHH
Confidence 788765444333
No 124
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.50 E-value=0.003 Score=70.44 Aligned_cols=94 Identities=19% Similarity=0.142 Sum_probs=72.0
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC----CcccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G----G~~EiI~dg~~G~lv 660 (700)
++++++...+ +++..++.. .+|++|+. -|+ .++.||+..|+|+|+-..+ ..++.+++-.+|...
T Consensus 281 ~~p~n~~v~~----~~p~~~~l~----~ad~vI~h---GG~-gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l 348 (406)
T COG1819 281 NVPDNVIVAD----YVPQLELLP----RADAVIHH---GGA-GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL 348 (406)
T ss_pred cCCCceEEec----CCCHHHHhh----hcCEEEec---CCc-chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec
Confidence 5778888887 555666555 59999998 233 4899999999999996443 355667777788887
Q ss_pred C--CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 661 D--PYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 661 ~--p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
+ .-+++.++++|.+++ .|+.+++...+...
T Consensus 349 ~~~~l~~~~l~~av~~vL----~~~~~~~~~~~~~~ 380 (406)
T COG1819 349 PFEELTEERLRAAVNEVL----ADDSYRRAAERLAE 380 (406)
T ss_pred CcccCCHHHHHHHHHHHh----cCHHHHHHHHHHHH
Confidence 7 578999999999998 88887776655443
No 125
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.39 E-value=0.0018 Score=72.57 Aligned_cols=154 Identities=12% Similarity=0.035 Sum_probs=96.8
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC-CcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~-~~V~flG~~~d~v~~~el~~ 607 (700)
.+|.......|=-...++...++++..|+..+++...+... .+.+++.+++.|++ +++.|.+ ..+.++..+
T Consensus 286 vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~----~~~l~~~~~~~Gv~~~Ri~f~~----~~~~~ehl~ 357 (468)
T PF13844_consen 286 VVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG----EARLRRRFAAHGVDPDRIIFSP----VAPREEHLR 357 (468)
T ss_dssp EEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH----HHHHHHHHHHTTS-GGGEEEEE-------HHHHHH
T ss_pred eEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH----HHHHHHHHHHcCCChhhEEEcC----CCCHHHHHH
Confidence 44544455567677788889999999899988776554322 25677888889985 7899998 555677777
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccc------cCCeEEEECCCCHHHHHHHHHHHHHhccC
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV------NGKSGYHIDPYHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~------dg~~G~lv~p~D~eaLAeaI~~ll~~~~~ 681 (700)
.+.. +|+++=+-. =+-|.+.+||+.+|+|||+-....++.-+. =|-.-+++. |.++..+.-..+. .
T Consensus 358 ~~~~-~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~--s~~eYv~~Av~La----~ 429 (468)
T PF13844_consen 358 RYQL-ADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD--SEEEYVEIAVRLA----T 429 (468)
T ss_dssp HGGG--SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S--SHHHHHHHHHHHH----H
T ss_pred Hhhh-CCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC--CHHHHHHHHHHHh----C
Confidence 7776 999998732 334689999999999999964333322221 122223343 7888888877776 8
Q ss_pred CHHHHHHHHHHHHHHHH
Q 005365 682 DPSYWDKISLGGLKRIE 698 (700)
Q Consensus 682 dp~~~~~ms~~ar~ra~ 698 (700)
|++.+++++++-+++..
T Consensus 430 D~~~l~~lR~~Lr~~~~ 446 (468)
T PF13844_consen 430 DPERLRALRAKLRDRRS 446 (468)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999998887654
No 126
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.35 E-value=0.00022 Score=77.01 Aligned_cols=83 Identities=27% Similarity=0.305 Sum_probs=57.3
Q ss_pred ChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccc----ccc-CCeEEEE-C------CCCHHHH
Q 005365 601 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEI----IVN-GKSGYHI-D------PYHGEQA 668 (700)
Q Consensus 601 ~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~Ei----I~d-g~~G~lv-~------p~D~eaL 668 (700)
+.+|..+ .|++.|+||+||++|.+..|.-.+|.|-|+|+..|..-. |++ ...|+++ + .++.++|
T Consensus 493 DYeeFVR----GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVR----GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhc----cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 3445544 599999999999999999999999999999998886544 433 2356554 2 2345666
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHH
Q 005365 669 AEILVDFFEKCKADPSYWDKISLG 692 (700)
Q Consensus 669 AeaI~~ll~~~~~dp~~~~~ms~~ 692 (700)
++-+.++. ....|+++-++
T Consensus 569 ~~~m~~F~-----~qsRRQRIiqR 587 (692)
T KOG3742|consen 569 ASFMYEFC-----KQSRRQRIIQR 587 (692)
T ss_pred HHHHHHHH-----HHHHHHHHHHh
Confidence 66666664 33445544443
No 127
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.35 E-value=0.15 Score=57.86 Aligned_cols=95 Identities=11% Similarity=0.143 Sum_probs=58.8
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccC-CeEEEEC
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID 661 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg-~~G~lv~ 661 (700)
.++....+ +++..++... . +.++||.= -|+ ++++||+++|+|+|+. |....+..+.+. ..|+-+.
T Consensus 323 ~~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~ 392 (451)
T PLN02410 323 SGRGYIVK----WAPQKEVLSH-P-AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE 392 (451)
T ss_pred cCCeEEEc----cCCHHHHhCC-C-ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC
Confidence 35566666 6666666552 1 13335554 222 5899999999999996 444445555443 5776663
Q ss_pred -CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 662 -PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 662 -p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
.-+.++++++|.+++ .+++ .+++++++++.
T Consensus 393 ~~~~~~~v~~av~~lm----~~~~-~~~~r~~a~~l 423 (451)
T PLN02410 393 GDLDRGAVERAVKRLM----VEEE-GEEMRKRAISL 423 (451)
T ss_pred CcccHHHHHHHHHHHH----cCCc-HHHHHHHHHHH
Confidence 347789999999998 5653 34455544443
No 128
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.34 E-value=0.17 Score=57.80 Aligned_cols=77 Identities=10% Similarity=0.099 Sum_probs=45.8
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEcCC----CCccccccc-CCeEEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVN-GKSGYHI 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT~~----GG~~EiI~d-g~~G~lv 660 (700)
.++...+ +++..++.. .+++ ||.= -| -++++||+++|+|+|+... .-.+..+.+ -..|+-+
T Consensus 345 ~g~~v~~----w~PQ~~iL~----h~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~ 412 (482)
T PLN03007 345 KGLIIRG----WAPQVLILD----HQATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSV 412 (482)
T ss_pred CCEEEec----CCCHHHHhc----cCccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEe
Confidence 4566666 555555544 2433 5543 22 3589999999999999643 333332221 1233332
Q ss_pred --------C--CCCHHHHHHHHHHHH
Q 005365 661 --------D--PYHGEQAAEILVDFF 676 (700)
Q Consensus 661 --------~--p~D~eaLAeaI~~ll 676 (700)
+ .-+.++++++|.+++
T Consensus 413 ~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 413 GAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred ccccccccccCcccHHHHHHHHHHHh
Confidence 1 137789999999998
No 129
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.31 E-value=0.026 Score=61.18 Aligned_cols=63 Identities=13% Similarity=0.171 Sum_probs=44.8
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC---CcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G---G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
..+++- ||++|-- -|....||...|+|+|.+-.| +.-+.+.+ .|++..-.|++++.+.+....
T Consensus 243 ~~Ll~~-a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 243 LDLLYY-ADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRKNL 308 (335)
T ss_pred HHHHHh-cCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHHhh
Confidence 345554 8888865 366679999999999997544 33333322 477887789999998776665
No 130
>PLN02208 glycosyltransferase family protein
Probab=97.29 E-value=0.086 Score=59.57 Aligned_cols=66 Identities=6% Similarity=-0.005 Sum_probs=45.6
Q ss_pred HHHHHHHHcCCCEEEcC----CCCccccccc-CCeEEEECC-----CCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATC----KGGPAEIIVN-GKSGYHIDP-----YHGEQAAEILVDFFEKCKADP-SYWDKISLGGLK 695 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~----~GG~~EiI~d-g~~G~lv~p-----~D~eaLAeaI~~ll~~~~~dp-~~~~~ms~~ar~ 695 (700)
++++||+++|+|+|+-. .-.....+.+ -..|..++. -+.++++++|.+++ .++ +..+++.+++++
T Consensus 340 nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 340 GTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred hHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 58999999999999964 3334444433 356777753 26789999999998 554 445666666654
Q ss_pred H
Q 005365 696 R 696 (700)
Q Consensus 696 r 696 (700)
.
T Consensus 416 ~ 416 (442)
T PLN02208 416 L 416 (442)
T ss_pred H
Confidence 3
No 131
>PLN02562 UDP-glycosyltransferase
Probab=97.07 E-value=0.2 Score=56.79 Aligned_cols=87 Identities=16% Similarity=0.167 Sum_probs=57.6
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCc--EEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccC-CeEEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHI 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aD--vfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg-~~G~lv 660 (700)
+++.+.+ +++..++.. ... +||.= -| -++++||+.+|+|+|+. |....+..+.+. ..|+-+
T Consensus 328 ~~~~v~~----w~PQ~~iL~----h~~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~ 395 (448)
T PLN02562 328 KQGKVVS----WAPQLEVLK----HQAVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI 395 (448)
T ss_pred cCEEEEe----cCCHHHHhC----CCccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe
Confidence 4566666 555555554 233 34432 22 35899999999999996 444455555442 567777
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHH
Q 005365 661 DPYHGEQAAEILVDFFEKCKADPSYWDKIS 690 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms 690 (700)
..-+.++++++|.+++ .|++++++..
T Consensus 396 ~~~~~~~l~~~v~~~l----~~~~~r~~a~ 421 (448)
T PLN02562 396 SGFGQKEVEEGLRKVM----EDSGMGERLM 421 (448)
T ss_pred CCCCHHHHHHHHHHHh----CCHHHHHHHH
Confidence 6568899999999998 7776665543
No 132
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.99 E-value=0.37 Score=55.12 Aligned_cols=59 Identities=17% Similarity=0.128 Sum_probs=39.8
Q ss_pred HHHHHHHHcCCCEEEcCC----CCcc-cccccCCeEEEECC-------------CCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATCK----GGPA-EIIVNGKSGYHIDP-------------YHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~~----GG~~-EiI~dg~~G~lv~p-------------~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
++++||+.+|+|+|+... -..+ .+++.-..|..++. -+.++++++|.+++. .|++++++
T Consensus 371 nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 371 NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 589999999999999643 3333 33444445766531 267889999999882 26555544
No 133
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.89 E-value=0.49 Score=53.21 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=57.6
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCccccccc
Q 005365 578 YSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVN 653 (700)
Q Consensus 578 ~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~d 653 (700)
+++.+.+.-..+++.+. +..+..|+..+++. +|++|-.-. -.++=|++.|+|+|+-. +-|..+.+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 34444444444555543 12345688899987 999887633 25677899999999953 34444444
Q ss_pred CCeEEEEC--CCCHHHHHHHHHHHHHhccCCHHH
Q 005365 654 GKSGYHID--PYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 654 g~~G~lv~--p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
|...++++ .-+++++.+++.+++ +|.+.
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~ 395 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVADTL----GQLPA 395 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHHHH----hCHHH
Confidence 22334443 345678888888887 66544
No 134
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.86 E-value=1 Score=50.94 Aligned_cols=93 Identities=13% Similarity=0.101 Sum_probs=58.6
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCc--EEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccC-CeEEE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYH 659 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aD--vfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg-~~G~l 659 (700)
++++.+.+ +++..++.. ... +||.= +=.++++||+++|+|+|+- |..-....+.+. ..|.-
T Consensus 316 ~~~~~i~~----W~PQ~~iL~----H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~ 383 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLS----NKAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVR 383 (449)
T ss_pred CCceEEeC----CCCHHHHhC----CCccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEE
Confidence 35577777 555555554 233 44443 2246999999999999996 444455566553 46766
Q ss_pred ECCC------CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 660 IDPY------HGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 660 v~p~------D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
+..+ +.+++++++.+++ .+++ .++++++|++.
T Consensus 384 v~~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~~~ 421 (449)
T PLN02173 384 VKAEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAGKW 421 (449)
T ss_pred EeecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHHHH
Confidence 5321 6799999999998 5533 24555555443
No 135
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=96.79 E-value=0.048 Score=59.23 Aligned_cols=239 Identities=16% Similarity=0.127 Sum_probs=123.7
Q ss_pred CCCCeEEEEcC-CCchHHHHHHHHhcC--CcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEec
Q 005365 403 QGKPDLIIGNY-SDGNIVASLLAHKLG--VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITS 479 (700)
Q Consensus 403 ~~~pDlIh~h~-~~~~lva~lla~~~g--iP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~ 479 (700)
..+||++++-+ ++.++-.....|+.+ +|+|+-+-- +--.|+.- + -....+..|.+.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~P--------sVWAWr~~----R-------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSP--------SVWAWRPK----R-------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECc--------ceeeechh----h-------HHHHHHHhhHeeee
Confidence 34999988854 555664444445555 787764321 11123211 0 11346678999999
Q ss_pred CHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCC------cceecCCCCccccccCCc--hh-hhchhhHHHHHHH
Q 005365 480 TFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP------KFNIVSPGADMSIYFPYT--EE-KRRLKSFHPEIEE 550 (700)
Q Consensus 480 S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~------k~~vIp~G~d~~~F~g~~--~~-~Kgl~~Ll~Ai~~ 550 (700)
=+.|.+.+++.-. ...+.+.++-+ -+++.+. ++. ++.........|.. ++ .+-...+.++++.
T Consensus 144 lPFE~~~y~k~g~-~~~yVGHpl~d------~i~~~~~r~~ar~~l~-~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~ 215 (381)
T COG0763 144 LPFEPAFYDKFGL-PCTYVGHPLAD------EIPLLPDREAAREKLG-IDADEKTLALLPGSRRSEIRRLLPPFVQAAQE 215 (381)
T ss_pred cCCCHHHHHhcCC-CeEEeCChhhh------hccccccHHHHHHHhC-CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHH
Confidence 8888654433211 11111111111 0100000 111 22223333344432 22 2445677889999
Q ss_pred HhhcCCCccEEEEecCChhhHHHHHHHH-HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHH
Q 005365 551 LLYSDVENKEHLKESKDLEEQAEMKKMY-SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 629 (700)
Q Consensus 551 Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~-~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~v 629 (700)
+....++.++++--.... .+... +.++.......+... .++.+..++. ||+.+..| |.+.
T Consensus 216 l~~~~~~~~~vlp~~~~~-----~~~~~~~~~~~~~~~~~~~~~--------~~~~~~a~~~-aD~al~aS-----GT~t 276 (381)
T COG0763 216 LKARYPDLKFVLPLVNAK-----YRRIIEEALKWEVAGLSLILI--------DGEKRKAFAA-ADAALAAS-----GTAT 276 (381)
T ss_pred HHhhCCCceEEEecCcHH-----HHHHHHHHhhccccCceEEec--------CchHHHHHHH-hhHHHHhc-----cHHH
Confidence 988888877776554421 12222 222222221223333 2455677775 99877765 9999
Q ss_pred HHHHHcCCCEEEcC-----------------CCCcccccccCCeE--EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHH
Q 005365 630 VEAMTCGLPTFATC-----------------KGGPAEIIVNGKSG--YHIDPYHGEQAAEILVDFFEKCKADPSYWDKIS 690 (700)
Q Consensus 630 lEAMA~GlPVVAT~-----------------~GG~~EiI~dg~~G--~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms 690 (700)
+|+|.+|+|.|.+- ..+++.|+-+.... ++=+.-.++.+++++..++ .|...+.++.
T Consensus 277 LE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll----~~~~~~~~~~ 352 (381)
T COG0763 277 LEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELL----LNGDRREALK 352 (381)
T ss_pred HHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHh----cChHhHHHHH
Confidence 99999999999862 23444444321100 0001225788999998887 7775544444
Q ss_pred H
Q 005365 691 L 691 (700)
Q Consensus 691 ~ 691 (700)
+
T Consensus 353 ~ 353 (381)
T COG0763 353 E 353 (381)
T ss_pred H
Confidence 3
No 136
>PLN00414 glycosyltransferase family protein
Probab=96.71 E-value=1.6 Score=49.50 Aligned_cols=86 Identities=8% Similarity=0.021 Sum_probs=55.3
Q ss_pred cCChhHHHHHHHccC--cEEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCcccccc-cCCeEEEECC-----CCHH
Q 005365 599 RVRNGELYRYICDTK--GAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIV-NGKSGYHIDP-----YHGE 666 (700)
Q Consensus 599 ~v~~~el~~~la~~a--DvfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~-dg~~G~lv~p-----~D~e 666 (700)
+++..++.+ .. ++||.= +=-++++||+++|+|+|+-. .--.+..+. .-..|..+.. -+.+
T Consensus 319 w~PQ~~vL~----h~~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 390 (446)
T PLN00414 319 WVEQPLILS----HPSVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKE 390 (446)
T ss_pred cCCHHHHhc----CCccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHH
Confidence 455555554 24 445553 22368999999999999964 333445553 3457777642 3788
Q ss_pred HHHHHHHHHHHhccCCH-HHHHHHHHHHHHH
Q 005365 667 QAAEILVDFFEKCKADP-SYWDKISLGGLKR 696 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp-~~~~~ms~~ar~r 696 (700)
++++++.+++ .++ +..+++.+++++.
T Consensus 391 ~i~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 391 SLRDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred HHHHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 9999999998 553 4455666666543
No 137
>PLN02670 transferase, transferring glycosyl groups
Probab=96.55 E-value=1.2 Score=50.81 Aligned_cols=50 Identities=18% Similarity=0.202 Sum_probs=38.7
Q ss_pred HHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEECC------CCHHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDP------YHGEQAAEILVDFF 676 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~p------~D~eaLAeaI~~ll 676 (700)
++++||+++|+|+|+. |.......++.-..|..++. -+.++++++|.+++
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm 427 (472)
T PLN02670 368 NSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAM 427 (472)
T ss_pred chHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHh
Confidence 6899999999999996 44445555555667887753 25889999999998
No 138
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.52 E-value=0.097 Score=59.29 Aligned_cols=149 Identities=14% Similarity=0.150 Sum_probs=103.1
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChhHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL-NGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L-~~~V~flG~~~d~v~~~el~ 606 (700)
..+|.......|-...+.....+++...|+..+++.++|+.++ -...+++++++.|+ .++++|++ +.++++..
T Consensus 430 avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~--~~~~l~~la~~~Gv~~eRL~f~p----~~~~~~h~ 503 (620)
T COG3914 430 AVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE--INARLRDLAEREGVDSERLRFLP----PAPNEDHR 503 (620)
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH--HHHHHHHHHHHcCCChhheeecC----CCCCHHHH
Confidence 4566666667788888888888888888999999988886653 45788999999998 47999999 56667888
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc-------CCCCcccccc-cCCeEEEECCCCHHHHHHHHHHHHHh
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-------CKGGPAEIIV-NGKSGYHIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-------~~GG~~EiI~-dg~~G~lv~p~D~eaLAeaI~~ll~~ 678 (700)
..+.- +|+++=..-|-| +.|.+||+-+|+||++- ..|+. ++. -|..-+++. +.++..++-..+-
T Consensus 504 a~~~i-ADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA~--s~~dYV~~av~~g-- 575 (620)
T COG3914 504 ARYGI-ADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVAD--SRADYVEKAVAFG-- 575 (620)
T ss_pred Hhhch-hheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhcC--CHHHHHHHHHHhc--
Confidence 88886 999886644433 46899999999999983 33321 111 133333443 4444444444443
Q ss_pred ccCCHHHHHHHHHH
Q 005365 679 CKADPSYWDKISLG 692 (700)
Q Consensus 679 ~~~dp~~~~~ms~~ 692 (700)
.|...+++.+..
T Consensus 576 --~dral~q~~r~~ 587 (620)
T COG3914 576 --SDRALRQQVRAE 587 (620)
T ss_pred --ccHHHHHhhHHH
Confidence 666666665544
No 139
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.49 E-value=0.015 Score=49.81 Aligned_cols=72 Identities=18% Similarity=0.169 Sum_probs=52.5
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchH--HHHHHHHhcCCcEEEE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI--VASLLAHKLGVTQCTI 434 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~l--va~lla~~~giP~V~t 434 (700)
+.+.+++.+|+... .+....|.+-....-+...+.++ +.||||+|...+.+ -+.+-|+.+|++.|+|
T Consensus 13 tngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~IlirE---~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILIRE---RIDIVHGHQAFSTLCHEAILHARTMGLKTVFT 81 (90)
T ss_pred CCCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHHHc---CeeEEEeehhhhHHHHHHHHHHHhCCCcEEee
Confidence 34789999998753 23445565555444455555555 89999999976655 5888899999999999
Q ss_pred ecCCc
Q 005365 435 AHALE 439 (700)
Q Consensus 435 ~H~l~ 439 (700)
-|++.
T Consensus 82 DHSLf 86 (90)
T PF08288_consen 82 DHSLF 86 (90)
T ss_pred ccccc
Confidence 99874
No 140
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.49 E-value=1.2 Score=48.78 Aligned_cols=133 Identities=11% Similarity=0.133 Sum_probs=91.3
Q ss_pred hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEE
Q 005365 538 KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFV 617 (700)
Q Consensus 538 ~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV 617 (700)
.+++..++.++.++....++..++.-... .+. .++.. -..++-.++|..+. ++...+...++.. |.+.+
T Consensus 218 ~~~~~~i~~al~~i~~~~~~~~viyp~H~-~~~---v~e~~--~~~L~~~~~v~li~----pl~~~~f~~L~~~-a~~il 286 (383)
T COG0381 218 GEPLEEICEALREIAEEYPDVIVIYPVHP-RPR---VRELV--LKRLKNVERVKLID----PLGYLDFHNLMKN-AFLIL 286 (383)
T ss_pred cccHHHHHHHHHHHHHhCCCceEEEeCCC-Chh---hhHHH--HHHhCCCCcEEEeC----CcchHHHHHHHHh-ceEEE
Confidence 37788899999999988865554443322 221 12222 24455566799987 7777888888886 64444
Q ss_pred eCCCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 005365 618 QPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLG 692 (700)
Q Consensus 618 ~PS~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ 692 (700)
-=| |...=||-..|+||++- +...-+|.++.| +-.++. .|.+.+.+++..++ ++++.+++|+..
T Consensus 287 tDS-----GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~~i~~~~~~ll----~~~~~~~~m~~~ 351 (383)
T COG0381 287 TDS-----GGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEENILDAATELL----EDEEFYERMSNA 351 (383)
T ss_pred ecC-----CchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHHHHHHHHHHHh----hChHHHHHHhcc
Confidence 333 66677999999999996 445566777554 445565 47789999999988 899988888753
No 141
>PLN02210 UDP-glucosyl transferase
Probab=96.47 E-value=2.3 Score=48.38 Aligned_cols=70 Identities=14% Similarity=0.191 Sum_probs=46.7
Q ss_pred cCChhHHHHHHHccCc--EEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCccccccc-CCeEEEECC------CCH
Q 005365 599 RVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVN-GKSGYHIDP------YHG 665 (700)
Q Consensus 599 ~v~~~el~~~la~~aD--vfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~d-g~~G~lv~p------~D~ 665 (700)
+++..++.. .+. +||.= -|+ ++++||+++|+|+|+-. ..-.+..+.+ -..|..+.. -+.
T Consensus 331 w~PQ~~iL~----h~~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 WSPQEKILS----HMAISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred cCCHHHHhc----CcCcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 555555554 243 55543 222 48999999999999964 3334445554 357877642 377
Q ss_pred HHHHHHHHHHH
Q 005365 666 EQAAEILVDFF 676 (700)
Q Consensus 666 eaLAeaI~~ll 676 (700)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 89999999998
No 142
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=96.43 E-value=0.21 Score=57.89 Aligned_cols=78 Identities=19% Similarity=0.184 Sum_probs=51.9
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc-CC------------------CCcccccccCC-eEEEE---CC
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CK------------------GGPAEIIVNGK-SGYHI---DP 662 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-~~------------------GG~~EiI~dg~-~G~lv---~p 662 (700)
++.++. ||+.+..| |.+.+|++.+|+|.|.. .. -+++.++.+.. -=-++ +.
T Consensus 483 ~~~m~a-aD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~ 556 (608)
T PRK01021 483 YELMRE-CDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKD 556 (608)
T ss_pred HHHHHh-cCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCccc
Confidence 677775 99999885 99999999999999984 22 22222332211 01122 33
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 663 YHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 663 ~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
-+++.+++++ +++ .|++.++++.+.-.
T Consensus 557 ~tpe~La~~l-~lL----~d~~~r~~~~~~l~ 583 (608)
T PRK01021 557 FQPEEVAAAL-DIL----KTSQSKEKQKDACR 583 (608)
T ss_pred CCHHHHHHHH-HHh----cCHHHHHHHHHHHH
Confidence 4789999986 666 78887777766443
No 143
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.42 E-value=0.038 Score=54.01 Aligned_cols=110 Identities=19% Similarity=0.246 Sum_probs=56.4
Q ss_pred HHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCC--chhhh-hcccccchhhhhhHHHHHH
Q 005365 395 AVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDS--DIYWK-NLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 395 ~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~--~~~w~-~~~~~y~~~~~~~~E~~al 470 (700)
...+++. +..||||++|...+. ++.+...+ ++|++.-+--.......+. +.... ......+...+-+.-...+
T Consensus 57 ~~~L~~~-Gf~PDvI~~H~GWGe--~Lflkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l 133 (171)
T PF12000_consen 57 ARQLRAQ-GFVPDVIIAHPGWGE--TLFLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLAL 133 (171)
T ss_pred HHHHHHc-CCCCCEEEEcCCcch--hhhHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHH
Confidence 3344443 568999999986665 33445555 6777653221111110000 00000 0111122222222344678
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCccccc
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 531 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~F 531 (700)
..||..|+.|..++. .+. . .+..|+.|+..|+|+..+
T Consensus 134 ~~~D~~isPT~wQ~~----~fP-----------~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 134 EQADAGISPTRWQRS----QFP-----------A---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HhCCcCcCCCHHHHH----hCC-----------H---------HHHcCcEEeecccchhhc
Confidence 899999999977754 221 1 114577777888777654
No 144
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=96.08 E-value=2.5 Score=48.28 Aligned_cols=76 Identities=13% Similarity=0.102 Sum_probs=48.8
Q ss_pred cEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEcCC----CCccccc-ccCCeEEEEC
Q 005365 589 QFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEII-VNGKSGYHID 661 (700)
Q Consensus 589 ~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT~~----GG~~EiI-~dg~~G~lv~ 661 (700)
.+.+.+ +++..++.. ...+ ||.= +=-++++||+.+|+|+|+... ......+ +.-..|..++
T Consensus 339 g~vv~~----W~PQ~~iL~----h~~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~ 406 (481)
T PLN02992 339 GFVVPS----WAPQAEILA----HQAVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSD 406 (481)
T ss_pred CEEEee----cCCHHHHhC----CcccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEec
Confidence 366666 555555544 2333 4432 223589999999999999643 3444455 2444677764
Q ss_pred C----CCHHHHHHHHHHHH
Q 005365 662 P----YHGEQAAEILVDFF 676 (700)
Q Consensus 662 p----~D~eaLAeaI~~ll 676 (700)
. -+.++++++|.+++
T Consensus 407 ~~~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 407 DPKEVISRSKIEALVRKVM 425 (481)
T ss_pred CCCCcccHHHHHHHHHHHh
Confidence 3 37789999999998
No 145
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=95.67 E-value=0.22 Score=51.91 Aligned_cols=122 Identities=15% Similarity=0.204 Sum_probs=71.2
Q ss_pred HHHHHHHhhcCCCccEEEE-ecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCC
Q 005365 545 HPEIEELLYSDVENKEHLK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE 623 (700)
Q Consensus 545 l~Ai~~Ll~~~~~~~l~i~-g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E 623 (700)
.+.++.|... +..++++ |+++. ....+.+.+++ .+++.+.- +.++|.++|.+ ||+.+..
T Consensus 175 ~kvl~~L~~~--~~nl~iV~gs~~p----~l~~l~k~~~~---~~~i~~~~------~~~dma~LMke-~d~aI~A---- 234 (318)
T COG3980 175 LKVLAELEQK--NVNLHIVVGSSNP----TLKNLRKRAEK---YPNINLYI------DTNDMAELMKE-ADLAISA---- 234 (318)
T ss_pred HHHHHHhhcc--CeeEEEEecCCCc----chhHHHHHHhh---CCCeeeEe------cchhHHHHHHh-cchheec----
Confidence 3444444432 2345554 43432 23455555554 46677764 34678899997 8887765
Q ss_pred CccHHHHHHHHcCCCE--EE--cCCCCccccccc----CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 624 AFGLTVVEAMTCGLPT--FA--TCKGGPAEIIVN----GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 624 ~fGl~vlEAMA~GlPV--VA--T~~GG~~EiI~d----g~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
-|.++.||...|+|. +. .+.-..+...+. -..|++. ...+....+.++. +|+..+..++..++
T Consensus 235 -aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~~~~~~i~----~d~~~rk~l~~~~~ 305 (318)
T COG3980 235 -AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKDYEILQIQ----KDYARRKNLSFGSK 305 (318)
T ss_pred -cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHHHHHHHhh----hCHHHhhhhhhccc
Confidence 389999999999993 33 222222221111 2245553 3355556666665 89999888776543
No 146
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=95.64 E-value=1.5 Score=47.27 Aligned_cols=140 Identities=9% Similarity=0.015 Sum_probs=87.9
Q ss_pred ccccCCchhh-hchhhHHHHHHHHhhcCCCccEEE-EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 529 SIYFPYTEEK-RRLKSFHPEIEELLYSDVENKEHL-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 529 ~~F~g~~~~~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i-~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
.+-.|+.... .+....++++.... ..+.++++ .+.|++ ..++++++.+..+++--.+++..+- +.++.+|..
T Consensus 187 tILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~-n~~Yi~~V~~~~~~lF~~~~~~iL~---e~mpf~eYl 260 (360)
T PF07429_consen 187 TILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGAN-NQAYIQQVIQAGKELFGAENFQILT---EFMPFDEYL 260 (360)
T ss_pred EEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCc-hHHHHHHHHHHHHHhcCccceeEhh---hhCCHHHHH
Confidence 3444554333 33333444444321 22344444 333433 3478888988888876556788765 467789999
Q ss_pred HHHHccCcEEEeCC-CCCCccHHHHHHHHcCCCEEEcCCCCc-ccccccCCeEEEE-CCCCHHHHHHHHHHHH
Q 005365 607 RYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIVNGKSGYHI-DPYHGEQAAEILVDFF 676 (700)
Q Consensus 607 ~~la~~aDvfV~PS-~~E~fGl~vlEAMA~GlPVVAT~~GG~-~EiI~dg~~G~lv-~p~D~eaLAeaI~~ll 676 (700)
++++. ||+.++.. +..|.|+ ++=.+.+|+||+.+...-. .++.+.+..=+.. +.-|.+.++++=+++.
T Consensus 261 ~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 261 ALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLA 331 (360)
T ss_pred HHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHh
Confidence 99997 99999996 6789984 5568999999999865554 4444443322222 4456677777666554
No 147
>PRK14986 glycogen phosphorylase; Provisional
Probab=95.00 E-value=0.24 Score=59.09 Aligned_cols=141 Identities=14% Similarity=0.112 Sum_probs=96.2
Q ss_pred CCCccccccCCchhhhchhh-HHHHHHH---HhhcCC----CccEEEEec---CChhhHHHHHHHHHHHH----HcCCCC
Q 005365 524 PGADMSIYFPYTEEKRRLKS-FHPEIEE---LLYSDV----ENKEHLKES---KDLEEQAEMKKMYSLID----QYKLNG 588 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~-Ll~Ai~~---Ll~~~~----~~~l~i~g~---Gd~ee~~~~~~l~~li~----~l~L~~ 588 (700)
+..-+++|.-|+...||... ++..+.. ++..+. ...++++|- ++...+..++.+.++++ +-.+.+
T Consensus 541 p~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 541 PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred cccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcC
Confidence 44446678888999999887 5555444 443321 123334432 33344445566666665 223344
Q ss_pred --cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECC
Q 005365 589 --QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDP 662 (700)
Q Consensus 589 --~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p 662 (700)
+|.|+. |. +=.+.+.+-.++|+-.+-|. .|+.|.+=+-||.-|.+.++|-.|...|+.++ ++|||.|..
T Consensus 621 ~lkVVFle---nY--~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~ 695 (815)
T PRK14986 621 KLKVVFIP---NY--SVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGN 695 (815)
T ss_pred ceeEEEeC---CC--CHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCC
Confidence 688886 22 34556666557999999876 79999999999999999999999999999987 899999975
Q ss_pred CCHHHHHH
Q 005365 663 YHGEQAAE 670 (700)
Q Consensus 663 ~D~eaLAe 670 (700)
+.++.++
T Consensus 696 -~~~ev~~ 702 (815)
T PRK14986 696 -TAEEVEA 702 (815)
T ss_pred -CHHHHHH
Confidence 5555444
No 148
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=94.99 E-value=2.9 Score=44.63 Aligned_cols=135 Identities=10% Similarity=0.015 Sum_probs=86.1
Q ss_pred ccccCCchhh-hchhhHHHHHHHHhhcCCCccEEE-EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 529 SIYFPYTEEK-RRLKSFHPEIEELLYSDVENKEHL-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 529 ~~F~g~~~~~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i-~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
.+-.|+.... .+....++++.+.. ..+.++++ .|.+.+. .+|+++..+..+++--.++++.+- +.++.+|..
T Consensus 148 tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~PlsYp~gn-~~Yi~~V~~~~~~lF~~~~~~~L~---e~l~f~eYl 221 (322)
T PRK02797 148 TILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMGYPANN-QAYIEEVRQAGLALFGAENFQILT---EKLPFDDYL 221 (322)
T ss_pred EEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECCcCCCC-HHHHHHHHHHHHHhcCcccEEehh---hhCCHHHHH
Confidence 3445554333 33444444544432 22334444 3332222 378888888888876557888886 577789999
Q ss_pred HHHHccCcEEEeC-CCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeE-EEECCCCHHHHHHH
Q 005365 607 RYICDTKGAFVQP-ALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSG-YHIDPYHGEQAAEI 671 (700)
Q Consensus 607 ~~la~~aDvfV~P-S~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G-~lv~p~D~eaLAea 671 (700)
++++. +|+.++- .+.+|.|. ++=.+..|+||+.+ ++.-..++.+.|..= |--+.-|...+.++
T Consensus 222 ~lL~~-~Dl~~f~~~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv~Vlf~~d~L~~~~v~e~ 287 (322)
T PRK02797 222 ALLRQ-CDLGYFIFARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGLPVLFTGDDLDEDIVREA 287 (322)
T ss_pred HHHHh-CCEEEEeechhhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCCeEEecCCcccHHHHHHH
Confidence 99997 9998887 46789985 44578999999998 566667777666543 22344455555554
No 149
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=94.95 E-value=7.4 Score=42.92 Aligned_cols=87 Identities=18% Similarity=0.291 Sum_probs=55.1
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCcccccccCCeEE--EE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNGKSGY--HI 660 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~dg~~G~--lv 660 (700)
.++|.+.- +.. ..++...++. +|+.|-.-+ -+++=||+.|+|+|+-. .-|+.+-. |..|+ .+
T Consensus 265 ~~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~--gl~~~~~~i 332 (385)
T COG2327 265 SAEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDL--GLPGFAIDI 332 (385)
T ss_pred ccceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHc--CCCcccccC
Confidence 36677764 222 3566768886 888775532 25677999999999953 23333333 33333 45
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 661 DPYHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
.|.|.+.+.+...+.+. .+++.+++
T Consensus 333 ~~~~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 333 DPLDAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred CCCchHHHHHHHHHHHh---ccHHHHhh
Confidence 66788889988888874 55554333
No 150
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=94.30 E-value=1.4 Score=48.21 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=47.5
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP 619 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 619 (700)
-+..+++++..+.... ..+++.+..+. +.+++..++. ..+.+.+ +.+.+++. ||+.+..
T Consensus 184 llP~~~~aa~~L~~~~--~~~~i~~a~~~------~~i~~~~~~~---~~~~~~~---------~~~~~m~~-aDlal~~ 242 (347)
T PRK14089 184 LMPIFKELAKKLEGKE--KILVVPSFFKG------KDLKEIYGDI---SEFEISY---------DTHKALLE-AEFAFIC 242 (347)
T ss_pred HHHHHHHHHHHHhhcC--cEEEEeCCCcH------HHHHHHHhcC---CCcEEec---------cHHHHHHh-hhHHHhc
Confidence 3445567887776542 44555544321 2333333322 2344543 23667775 9988887
Q ss_pred CCCCCccHHHHHHHHcCCCEEEc
Q 005365 620 ALYEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 620 S~~E~fGl~vlEAMA~GlPVVAT 642 (700)
| |.+.+|++.+|+|.|..
T Consensus 243 S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 243 S-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred C-----cHHHHHHHHhCCCEEEE
Confidence 5 88889999999999985
No 151
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=94.26 E-value=0.15 Score=60.53 Aligned_cols=142 Identities=15% Similarity=0.090 Sum_probs=93.2
Q ss_pred CCCCccccccCCchhhhchhh-HHHHH---HHHhhcCCC---c-cEEEEec---CChhhHHHHHHHHHHHHHcC----CC
Q 005365 523 SPGADMSIYFPYTEEKRRLKS-FHPEI---EELLYSDVE---N-KEHLKES---KDLEEQAEMKKMYSLIDQYK----LN 587 (700)
Q Consensus 523 p~G~d~~~F~g~~~~~Kgl~~-Ll~Ai---~~Ll~~~~~---~-~l~i~g~---Gd~ee~~~~~~l~~li~~l~----L~ 587 (700)
.+..-++++.-|+...||... ++..+ ..++..+.. + .++++|- ++...+..++.+...++..+ +.
T Consensus 524 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~ 603 (794)
T TIGR02093 524 DPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVG 603 (794)
T ss_pred CccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhC
Confidence 344556778889999999877 55544 444433211 2 2333332 22223333444444443321 34
Q ss_pred C--cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEEC
Q 005365 588 G--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHID 661 (700)
Q Consensus 588 ~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~ 661 (700)
+ +|.|+. | . +=.+.+.+-.++|+-.+-|. .|+.|..=+-+|.-|.++++|-.|...|+.++ ++|+|+|-
T Consensus 604 ~~lkVVFle---n-Y-~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 604 DKLKVVFVP---N-Y-NVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred CceeEEEeC---C-C-ChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 5 688886 2 2 23455555556999999876 79999999999999999999999999999987 88999997
Q ss_pred CCCHHHHHH
Q 005365 662 PYHGEQAAE 670 (700)
Q Consensus 662 p~D~eaLAe 670 (700)
. +.++..+
T Consensus 679 ~-~~~ev~~ 686 (794)
T TIGR02093 679 L-TVEEVEA 686 (794)
T ss_pred C-CHHHHHH
Confidence 4 4555443
No 152
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=94.12 E-value=0.54 Score=55.60 Aligned_cols=135 Identities=19% Similarity=0.147 Sum_probs=96.2
Q ss_pred CCCccccccCCchhhhchhhHHHHHHHHhhcC---CCccEE-EEec----CChhhHHHHHHHHHHHHHcCCCCcEEEecc
Q 005365 524 PGADMSIYFPYTEEKRRLKSFHPEIEELLYSD---VENKEH-LKES----KDLEEQAEMKKMYSLIDQYKLNGQFRWISS 595 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~---~~~~l~-i~g~----Gd~ee~~~~~~l~~li~~l~L~~~V~flG~ 595 (700)
|..-+++|.-|+...||....+.-+..+.... ....+. |.|+ ++...+..++.+...++..+...+|.|+.
T Consensus 485 p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~- 563 (750)
T COG0058 485 PNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLP- 563 (750)
T ss_pred CCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeC-
Confidence 55567788889999999876654443333221 123344 3333 23333445566666777666667899996
Q ss_pred ccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCcccccc--cCCeEEEECCC
Q 005365 596 QMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHIDPY 663 (700)
Q Consensus 596 ~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~--dg~~G~lv~p~ 663 (700)
|. +-.+.+.+-.++||-.+-|. .|+.|.+=+-||.-|.+.|+|-.|...|+.+ .++|||+|...
T Consensus 564 --nY--dvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~ 631 (750)
T COG0058 564 --NY--DVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGET 631 (750)
T ss_pred --CC--ChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCc
Confidence 21 34555555557999999775 6999999999999999999999999999997 89999999753
No 153
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=93.80 E-value=12 Score=40.66 Aligned_cols=92 Identities=16% Similarity=0.213 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccc--
Q 005365 572 AEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE-- 649 (700)
Q Consensus 572 ~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~E-- 649 (700)
+..+++.+.+. -.++|...-+. .++..+++. |+..|.-+-| +|+.|-++.|||.+.-..+.++|
T Consensus 264 ~~r~~l~~~A~---~~p~i~I~~f~------~~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQ 329 (400)
T COG4671 264 AQRQKLLASAP---KRPHISIFEFR------NDFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQ 329 (400)
T ss_pred HHHHHHHHhcc---cCCCeEEEEhh------hhHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHH
Confidence 34444444433 33568887754 457888886 8888876432 58899999999999977665555
Q ss_pred cccc------CCeEEEEC-CCCHHHHHHHHHHHHH
Q 005365 650 IIVN------GKSGYHID-PYHGEQAAEILVDFFE 677 (700)
Q Consensus 650 iI~d------g~~G~lv~-p~D~eaLAeaI~~ll~ 677 (700)
.+.. |--.++-+ .-.++.||++|...+.
T Consensus 330 liRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 330 LIRAQRLEELGLVDVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred HHHHHHHHhcCcceeeCcccCChHHHHHHHHhccc
Confidence 1110 22233332 2357888999888774
No 154
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=93.66 E-value=0.39 Score=57.22 Aligned_cols=141 Identities=12% Similarity=0.046 Sum_probs=92.9
Q ss_pred CCCCccccccCCchhhhchhh-HHHHHH---HHhhcCC---C-ccEEEEec---CChhhHHHHHHHHHHHHHcC----CC
Q 005365 523 SPGADMSIYFPYTEEKRRLKS-FHPEIE---ELLYSDV---E-NKEHLKES---KDLEEQAEMKKMYSLIDQYK----LN 587 (700)
Q Consensus 523 p~G~d~~~F~g~~~~~Kgl~~-Ll~Ai~---~Ll~~~~---~-~~l~i~g~---Gd~ee~~~~~~l~~li~~l~----L~ 587 (700)
.+..-+++|.-|+...||... ++..+. .++..+. . ..++++|- |+...+..++.+...++..+ +.
T Consensus 526 dp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~ 605 (798)
T PRK14985 526 NPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVG 605 (798)
T ss_pred CchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhC
Confidence 344456778888999999877 555444 3433321 1 23334332 23333344445555553332 24
Q ss_pred C--cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEEC
Q 005365 588 G--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHID 661 (700)
Q Consensus 588 ~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~ 661 (700)
+ +|.|+. | . +=.+.+.+-.++|+-.+-|. .|+.|..=+-+|.-|.+.++|-.|...|+.++ ++|||.|-
T Consensus 606 ~~lkVVFle---n-Y-~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 606 DKLKVVFLP---D-Y-CVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred CceeEEEeC---C-C-ChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 4 688886 2 2 33455555556999999876 79999999999999999999999999999986 78999997
Q ss_pred CCCHHHHH
Q 005365 662 PYHGEQAA 669 (700)
Q Consensus 662 p~D~eaLA 669 (700)
. +.++..
T Consensus 681 ~-~~~ev~ 687 (798)
T PRK14985 681 H-TVEQVK 687 (798)
T ss_pred C-CHHHHH
Confidence 5 444443
No 155
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=93.29 E-value=0.4 Score=57.32 Aligned_cols=141 Identities=15% Similarity=0.074 Sum_probs=94.6
Q ss_pred CCCCccccccCCchhhhchhh-HHHH---HHHHhhcCC---Cc-cEEEEec---CChhhHHHHHHHHHHHHHc----CCC
Q 005365 523 SPGADMSIYFPYTEEKRRLKS-FHPE---IEELLYSDV---EN-KEHLKES---KDLEEQAEMKKMYSLIDQY----KLN 587 (700)
Q Consensus 523 p~G~d~~~F~g~~~~~Kgl~~-Ll~A---i~~Ll~~~~---~~-~l~i~g~---Gd~ee~~~~~~l~~li~~l----~L~ 587 (700)
.|..-+++|.-|+...||... ++.. +.+++..+. .+ .++++|- ++...+..++.+..+++.. .+.
T Consensus 527 dp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~ 606 (797)
T cd04300 527 DPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVG 606 (797)
T ss_pred CCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcC
Confidence 445556788889999999887 5544 444444321 12 2333332 2333334455555555532 234
Q ss_pred C--cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEEC
Q 005365 588 G--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHID 661 (700)
Q Consensus 588 ~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~ 661 (700)
+ +|.|+. |. +=.+.+.+-.++|+-.+-|. .|+.|..=+-+|.-|.++++|-.|...|+.++ ++|+|+|-
T Consensus 607 ~~lkVVFle---nY--~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 607 DKLKVVFLP---NY--NVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred CceEEEEeC---CC--ChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeC
Confidence 4 688886 22 33455555556999999876 79999999999999999999999999999987 88999997
Q ss_pred CCCHHHHH
Q 005365 662 PYHGEQAA 669 (700)
Q Consensus 662 p~D~eaLA 669 (700)
. +.++..
T Consensus 682 ~-~~~ev~ 688 (797)
T cd04300 682 L-TAEEVE 688 (797)
T ss_pred C-CHHHHH
Confidence 5 444444
No 156
>PLN03015 UDP-glucosyl transferase
Probab=93.28 E-value=18 Score=41.22 Aligned_cols=50 Identities=18% Similarity=0.136 Sum_probs=34.1
Q ss_pred HHHHHHHHcCCCEEEcCC----CCccccc-ccCCeEEEEC------CCCHHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATCK----GGPAEII-VNGKSGYHID------PYHGEQAAEILVDFF 676 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~~----GG~~EiI-~dg~~G~lv~------p~D~eaLAeaI~~ll 676 (700)
++++||+++|+|+|+-.. .-....+ +.-..|.-+. .-..++++++|..++
T Consensus 364 nS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 364 SSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIV 424 (470)
T ss_pred hhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHH
Confidence 589999999999999643 3333333 2334555552 125688999999987
No 157
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=93.26 E-value=0.039 Score=53.35 Aligned_cols=91 Identities=15% Similarity=0.215 Sum_probs=57.5
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--------cccccccCCeEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYH 659 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG--------~~EiI~dg~~G~l 659 (700)
.+|.+.++.+ ++..+|+. ||+.|.-+ =+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6789998654 36777876 99988852 3479999999999998866555 2223333334444
Q ss_pred ECC--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 660 IDP--YHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 660 v~p--~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
+.. .+++.|.++|..++ .++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i~~l~----~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIEELL----SDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHHCHC----CCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHHHHH----cCcHHHHHHHHHH
Confidence 432 23677888888876 8888777766553
No 158
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.24 E-value=0.13 Score=55.77 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=77.9
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCC---CCC---ccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEEC
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL---YEA---FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHID 661 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~---~E~---fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~ 661 (700)
+++..+|... +.+.+..++.. .++++.=++ .++ +.+-+.|+|+||.|.+++...+..-.+.+|+.=.+.
T Consensus 237 ~~~~yIg~~~---~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~- 311 (373)
T COG4641 237 PNVQYIGYYN---PKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY- 311 (373)
T ss_pred chhhhhhccC---ccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe-
Confidence 4566677322 12666676665 777666443 222 378899999999999999888888888888764444
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 662 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 662 p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
.|..++++++..++ ..++.++++.+.|++++..
T Consensus 312 -~d~kdl~~~~~yll----~h~~erkeiae~~ye~V~~ 344 (373)
T COG4641 312 -QDSKDLKEKLKYLL----NHPDERKEIAECAYERVLA 344 (373)
T ss_pred -cCHHHHHHHHHHHh----cCcchHHHHHHhhHHHHHH
Confidence 49999999999998 8999999999999999864
No 159
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=93.17 E-value=4.2 Score=43.29 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=38.5
Q ss_pred CcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC---CcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 613 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 613 aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G---G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
|++++-. -|.-.-||...|+|.|++.-| +..+... +.|.++...|+.+..+...+.+
T Consensus 253 a~lvig~-----ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 253 ATLVIGA-----GGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hheeecC-----CchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 5555433 355568999999999998744 3333332 3677888778877766666665
No 160
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=92.59 E-value=15 Score=38.41 Aligned_cols=84 Identities=17% Similarity=0.137 Sum_probs=51.2
Q ss_pred hhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC
Q 005365 542 KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 621 (700)
Q Consensus 542 ~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 621 (700)
+...+.++.+... +..+++.|+.+ +.+ ...++.+..+..+.+.+.| ..+..|+..+++. +|++|.+.
T Consensus 140 ~~~~~l~~~l~~~--~~~ivl~g~~~--e~~---~~~~i~~~~~~~~~~~~~~----~~~l~e~~~li~~-~~l~I~~D- 206 (279)
T cd03789 140 ERFAALADRLLAR--GARVVLTGGPA--ERE---LAEEIAAALGGPRVVNLAG----KTSLRELAALLAR-ADLVVTND- 206 (279)
T ss_pred HHHHHHHHHHHHC--CCEEEEEechh--hHH---HHHHHHHhcCCCccccCcC----CCCHHHHHHHHHh-CCEEEeeC-
Confidence 3455555655543 55666665543 222 2333333332233355666 5567999999997 99999983
Q ss_pred CCCccHHHHHHHHcCCCEEEc
Q 005365 622 YEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 622 ~E~fGl~vlEAMA~GlPVVAT 642 (700)
+ | .+-=|.+.|+|+|+-
T Consensus 207 --s-g-~~HlA~a~~~p~i~l 223 (279)
T cd03789 207 --S-G-PMHLAAALGTPTVAL 223 (279)
T ss_pred --C-H-HHHHHHHcCCCEEEE
Confidence 2 3 344456999999994
No 161
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=92.42 E-value=19 Score=39.19 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=49.9
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
...+.++.+... +..+++.|+++.++.+ ...++++.......+.+.| ..+..|+..+++. +++||-.-
T Consensus 203 ~fa~l~~~L~~~--~~~vvl~ggp~e~e~~---~~~~i~~~~~~~~~~~l~g----~~sL~el~ali~~-a~l~v~nD-- 270 (352)
T PRK10422 203 KFSAVIDALQAR--GYEVVLTSGPDKDDLA---CVNEIAQGCQTPPVTALAG----KTTFPELGALIDH-AQLFIGVD-- 270 (352)
T ss_pred HHHHHHHHHHHC--CCeEEEEcCCChHHHH---HHHHHHHhcCCCccccccC----CCCHHHHHHHHHh-CCEEEecC--
Confidence 444455555432 4556666654332222 2233333222223355677 6678999999997 99999883
Q ss_pred CCccHHHHHHHHcCCCEEE
Q 005365 623 EAFGLTVVEAMTCGLPTFA 641 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVA 641 (700)
+- .+-=|-|.|+|+|+
T Consensus 271 -SG--p~HlAaA~g~P~v~ 286 (352)
T PRK10422 271 -SA--PAHIAAAVNTPLIC 286 (352)
T ss_pred -CH--HHHHHHHcCCCEEE
Confidence 22 34446788999998
No 162
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=91.10 E-value=25 Score=37.97 Aligned_cols=84 Identities=17% Similarity=0.166 Sum_probs=50.5
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
...+.++.+... +..+++.|+++..+.+..+ ++.+..+-..-+.+.| ..+..|+..+++. ++++|-.
T Consensus 201 ~~~~l~~~l~~~--~~~ivl~g~p~~~e~~~~~---~i~~~~~~~~~~~l~g----~~sL~el~ali~~-a~l~Vs~--- 267 (344)
T TIGR02201 201 RFSALIDALHAR--GYEVVLTSGPDKDELAMVN---EIAQGCQTPRVTSLAG----KLTLPQLAALIDH-ARLFIGV--- 267 (344)
T ss_pred HHHHHHHHHHhC--CCeEEEecCCCHHHHHHHH---HHHhhCCCCcccccCC----CCCHHHHHHHHHh-CCEEEec---
Confidence 344445555432 4566777654332222222 3333323222345677 6778999999997 9999998
Q ss_pred CCccHHHHHHHHcCCCEEE
Q 005365 623 EAFGLTVVEAMTCGLPTFA 641 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVA 641 (700)
++ ..+-=|-|.|+|+|+
T Consensus 268 DS--Gp~HlAaA~g~p~v~ 284 (344)
T TIGR02201 268 DS--VPMHMAAALGTPLVA 284 (344)
T ss_pred CC--HHHHHHHHcCCCEEE
Confidence 33 344557889999998
No 163
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=90.77 E-value=3.5 Score=48.83 Aligned_cols=140 Identities=12% Similarity=0.083 Sum_probs=84.3
Q ss_pred CCCccccccCCchhhhchhhH----HHHHHHHhhcCCC---c-cEEEEec---CChhhHHHHHHHHHHHHH----cCCCC
Q 005365 524 PGADMSIYFPYTEEKRRLKSF----HPEIEELLYSDVE---N-KEHLKES---KDLEEQAEMKKMYSLIDQ----YKLNG 588 (700)
Q Consensus 524 ~G~d~~~F~g~~~~~Kgl~~L----l~Ai~~Ll~~~~~---~-~l~i~g~---Gd~ee~~~~~~l~~li~~----l~L~~ 588 (700)
|..-+++|+-|..+.||.... +.....++..... + .++++|- +|...+..++.+.++++. ..+.+
T Consensus 442 p~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~ 521 (713)
T PF00343_consen 442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGD 521 (713)
T ss_dssp TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCC
T ss_pred cchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhcc
Confidence 344456678888889988762 3445555554321 2 2333332 222333344444444432 23444
Q ss_pred --cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECC
Q 005365 589 --QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDP 662 (700)
Q Consensus 589 --~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p 662 (700)
+|.|+. |+ +=.+.+.+-.++||-.+-|+ .|+.|.+-+-||.-|.+.++|-.|...|+.+. .+|.|++-.
T Consensus 522 ~lkVvFle---nY--dvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~ 596 (713)
T PF00343_consen 522 RLKVVFLE---NY--DVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGL 596 (713)
T ss_dssp GEEEEEET---T---SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-
T ss_pred ceeEEeec---CC--cHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCC
Confidence 688886 22 44667777667999999875 79999999999999999999999999999864 458899864
Q ss_pred CCHHHHH
Q 005365 663 YHGEQAA 669 (700)
Q Consensus 663 ~D~eaLA 669 (700)
+.++..
T Consensus 597 -~~~ev~ 602 (713)
T PF00343_consen 597 -TAEEVE 602 (713)
T ss_dssp -BHHHHH
T ss_pred -CHHHHH
Confidence 455543
No 164
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=90.59 E-value=14 Score=39.71 Aligned_cols=92 Identities=13% Similarity=0.076 Sum_probs=55.6
Q ss_pred hhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC
Q 005365 542 KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 621 (700)
Q Consensus 542 ~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 621 (700)
..+...+..+..... ..+.+..+.-.+. +..+.+.+..+ -.+.+.+.. .....-+..+|+. ||.+++..-
T Consensus 168 ~~l~~~l~~~~~~~~-~~~~vttSRRTp~-~~~~~L~~~~~---~~~~~~~~~----~~~~nPy~~~La~-ad~i~VT~D 237 (311)
T PF06258_consen 168 ERLLDQLAALAAAYG-GSLLVTTSRRTPP-EAEAALRELLK---DNPGVYIWD----GTGENPYLGFLAA-ADAIVVTED 237 (311)
T ss_pred HHHHHHHHHHHHhCC-CeEEEEcCCCCcH-HHHHHHHHhhc---CCCceEEec----CCCCCcHHHHHHh-CCEEEEcCc
Confidence 356666666666554 4566666654332 23344444332 335563333 2223446778886 999998843
Q ss_pred CCCccHHHHHHHHcCCCEEEcCCCC
Q 005365 622 YEAFGLTVVEAMTCGLPTFATCKGG 646 (700)
Q Consensus 622 ~E~fGl~vlEAMA~GlPVVAT~~GG 646 (700)
.-.-+-||.++|+||..-...+
T Consensus 238 ---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 238 ---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred ---cHHHHHHHHHcCCCEEEecCCC
Confidence 2223789999999999987665
No 165
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=89.70 E-value=30 Score=36.50 Aligned_cols=142 Identities=15% Similarity=0.083 Sum_probs=77.8
Q ss_pred ccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHH----------HHHHcCC--CCcEEEec
Q 005365 527 DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYS----------LIDQYKL--NGQFRWIS 594 (700)
Q Consensus 527 d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~----------li~~l~L--~~~V~flG 594 (700)
+..+|.++...-||+..+++.-+..++. +...-.+-|....+ +.+.-+.. .+.+..+ ..-+-.+|
T Consensus 184 nv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~--A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~ 260 (355)
T PF11440_consen 184 NVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP--AKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYG 260 (355)
T ss_dssp EEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST--HHHHHHHTT--EEEE-CTGGGG---SSS--EEEES
T ss_pred ccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC--ceeeeecCCcccccCccccccCcccCCCCcceecc
Confidence 3457999999999999998888876654 44444554432221 22221111 0001111 12255666
Q ss_pred cccCcCChhHHHHHHHccCcEEEeCCC------CCCccHHHHHHHHcCC-CEEEcCCCCccc-------ccccCCeEEEE
Q 005365 595 SQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGL-PTFATCKGGPAE-------IIVNGKSGYHI 660 (700)
Q Consensus 595 ~~~d~v~~~el~~~la~~aDvfV~PS~------~E~fGl~vlEAMA~Gl-PVVAT~~GG~~E-------iI~dg~~G~lv 660 (700)
+.-++|....++. +...++-+. .+..-.+-+|..|||. ||+-+..|...- ++.+....+.+
T Consensus 261 ----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~~ 335 (355)
T PF11440_consen 261 ----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIYF 335 (355)
T ss_dssp ----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EEE
T ss_pred ----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeEe
Confidence 5557899999987 655555442 3567889999999997 666654443332 34445567889
Q ss_pred CCCCHHHHHHHHHHHH
Q 005365 661 DPYHGEQAAEILVDFF 676 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll 676 (700)
+..|-++..++|.++.
T Consensus 336 De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 336 DENDLESTVEKLIEVA 351 (355)
T ss_dssp -TTSHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHh
Confidence 9999999999999885
No 166
>PLN03004 UDP-glycosyltransferase
Probab=89.38 E-value=1.8 Score=49.17 Aligned_cols=85 Identities=14% Similarity=0.122 Sum_probs=56.0
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCccccccc-CCeEEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHI 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~d-g~~G~lv 660 (700)
.++.+.+ +++..++.. .+++ ||.= +=-++++||+++|+|+|+. |.......+.+ -..|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 3466666 555555544 3665 4432 2235899999999999996 45555555643 3578777
Q ss_pred CC-----CCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 661 DP-----YHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 661 ~p-----~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
+. -+.++++++|.+++ .|++++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~~ 430 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRER 430 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHHH
Confidence 52 27899999999998 67655443
No 167
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=88.92 E-value=38 Score=36.71 Aligned_cols=42 Identities=14% Similarity=-0.020 Sum_probs=32.1
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEE
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 641 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVA 641 (700)
+.+.| ..+..|+..+++. |+++|-.- +- .+-=|-|.|+|+|+
T Consensus 244 ~~l~g----~~sL~el~ali~~-a~l~I~nD---TG--p~HlAaA~g~P~va 285 (348)
T PRK10916 244 RNLAG----ETQLEQAVILIAA-CKAIVTND---SG--LMHVAAALNRPLVA 285 (348)
T ss_pred eeccC----CCCHHHHHHHHHh-CCEEEecC---Ch--HHHHHHHhCCCEEE
Confidence 45556 6678999999997 99999873 22 34457789999998
No 168
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=88.44 E-value=4.5 Score=40.57 Aligned_cols=37 Identities=14% Similarity=0.187 Sum_probs=25.6
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
|||++....|+-. ..+. .|.++|++.||+|. |+++..
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~ 37 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDS 37 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESS
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCC
Confidence 8999999888732 2234 55667777789999 998764
No 169
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=87.78 E-value=0.89 Score=47.89 Aligned_cols=79 Identities=11% Similarity=0.035 Sum_probs=49.2
Q ss_pred CCeEEEEcC-CCchHHHHHHHHhcCCcEEEEecCCccccCC--CCchhhh---hcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 405 KPDLIIGNY-SDGNIVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWK---NLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 405 ~pDlIh~h~-~~~~lva~lla~~~giP~V~t~H~l~~~~~~--~~~~~w~---~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
+.||+|+.. ..++++|+.++.+.|+|++.|=|+....... -....|. ...+..........-+.+++.||.|++
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~~ 251 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRITP 251 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeecc
Confidence 579999954 5678899999999999999999998533211 0111222 000000011111124467999999999
Q ss_pred cCHHH
Q 005365 479 STFQE 483 (700)
Q Consensus 479 ~S~~~ 483 (700)
.+...
T Consensus 252 l~~~n 256 (268)
T PF11997_consen 252 LYEYN 256 (268)
T ss_pred cchhh
Confidence 99654
No 170
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=87.17 E-value=17 Score=43.58 Aligned_cols=137 Identities=10% Similarity=0.073 Sum_probs=92.8
Q ss_pred chhhhchhhHHHHHHHHhhcCCCcc----EEEEecCChhhHHHHHHHH----HHHHHc----CC--CCcEEEeccccCcC
Q 005365 535 TEEKRRLKSFHPEIEELLYSDVENK----EHLKESKDLEEQAEMKKMY----SLIDQY----KL--NGQFRWISSQMNRV 600 (700)
Q Consensus 535 ~~~~Kgl~~Ll~Ai~~Ll~~~~~~~----l~i~g~Gd~ee~~~~~~l~----~li~~l----~L--~~~V~flG~~~d~v 600 (700)
+...||...=+.++++++..++... +..+..+.....+..++++ ..+... +- ...|+++- ..+
T Consensus 285 ~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~ 361 (732)
T KOG1050|consen 285 LDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLL---KDL 361 (732)
T ss_pred cccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEee---ccC
Confidence 3445677666788888888776531 1112222111112122222 222211 11 12344443 467
Q ss_pred ChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcC----CCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 601 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 601 ~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~G----lPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+..++..+++- +|+....++.+|..++.+|+.+|. ++.|.+..-|..+..++ ...++.|-|.++++..|..++
T Consensus 362 ~~~~l~a~~~V-aev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnpw~~~~~~~~i~~al 438 (732)
T KOG1050|consen 362 PFLELLALYKV-AEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLED--AAIVVNPWDGDEFAILISKAL 438 (732)
T ss_pred CHHHHhhhHHh-hhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccc--cCEEECCcchHHHHHHHHHHh
Confidence 78899999996 999999999999999999999885 78999998888888755 357889999999999999988
Q ss_pred H
Q 005365 677 E 677 (700)
Q Consensus 677 ~ 677 (700)
.
T Consensus 439 ~ 439 (732)
T KOG1050|consen 439 T 439 (732)
T ss_pred h
Confidence 3
No 171
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=86.40 E-value=24 Score=36.89 Aligned_cols=86 Identities=20% Similarity=0.214 Sum_probs=48.4
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc-CCCCcEEEeccccCcCChhHHHHHHHccCcEEEe
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY-KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ 618 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l-~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~ 618 (700)
....+.+.+..+....|+..+++.--.+..... .. ...++. +..+ +.++.. . ..++.++.. +|..+.
T Consensus 138 ~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~---~~-~~~~~~~~~~~-~~~~~~---~---~~~~~Ll~~-s~~Vvt 205 (269)
T PF05159_consen 138 SQADFLDMLESFAKENPDAKLVVKPHPDERGGN---KY-SYLEELPNLPN-VVIIDD---D---VNLYELLEQ-SDAVVT 205 (269)
T ss_pred cHhHHHHHHHHHHHHCCCCEEEEEECchhhCCC---Ch-hHhhhhhcCCC-eEEECC---C---CCHHHHHHh-CCEEEE
Confidence 344556667777766666666664433211000 00 222222 3333 444431 2 345677776 776665
Q ss_pred CCCCCCccHHHHHHHHcCCCEEEc
Q 005365 619 PALYEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 619 PS~~E~fGl~vlEAMA~GlPVVAT 642 (700)
- .+.+-+||+.+|+||++-
T Consensus 206 i-----nStvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 206 I-----NSTVGLEALLHGKPVIVF 224 (269)
T ss_pred E-----CCHHHHHHHHcCCceEEe
Confidence 5 367889999999999995
No 172
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=86.11 E-value=6.7 Score=42.65 Aligned_cols=153 Identities=13% Similarity=0.190 Sum_probs=104.9
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC--CCcEEEeccccCcCChhHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL--NGQFRWISSQMNRVRNGEL 605 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L--~~~V~flG~~~d~v~~~el 605 (700)
..+|-|++.--|.-..-+-+.+++-+..|+.-.++.....- ...+-..+...+..+.+ .++..|.| + =++
T Consensus 192 vavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~-~~ke~~~F~~f~~~ldlvr~gkasfeg----R---~~~ 263 (364)
T PF10933_consen 192 VAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTY-HLKEHPTFVNFANSLDLVRDGKASFEG----R---FDF 263 (364)
T ss_pred EEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecch-hhhcCHHHHHHHHhhHHhhcCeeEEee----e---cCh
Confidence 34455555555554444445555555555543333222211 11333556666666665 67789999 3 245
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHH
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
+.++++..|+.|.=.+.-+....-.||+--|=|.|-- +..+. ++|+..+..|..+=++++.+.+. +..+.
T Consensus 264 p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHN-----S~~l~--d~GYYY~~fD~~~G~r~L~~A~~---~HD~~ 333 (364)
T PF10933_consen 264 PDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHN-----SPLLK--DVGYYYPDFDAFEGARQLLRAIR---EHDAD 333 (364)
T ss_pred HHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccC-----cchhc--ccCcCCCCccHHHHHHHHHHHHH---Hcccc
Confidence 7888888999998888778888999999999999873 34553 38999999999999999999985 66777
Q ss_pred HHHHHHHHHHHHH
Q 005365 686 WDKISLGGLKRIE 698 (700)
Q Consensus 686 ~~~ms~~ar~ra~ 698 (700)
++...++|++.+.
T Consensus 334 ~~~Y~~ra~~~l~ 346 (364)
T PF10933_consen 334 LDAYRARARRLLD 346 (364)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877654
No 173
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=86.09 E-value=9.7 Score=41.66 Aligned_cols=225 Identities=15% Similarity=0.111 Sum_probs=97.8
Q ss_pred CeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHH
Q 005365 406 PDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIA 485 (700)
Q Consensus 406 pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~ 485 (700)
..+++.+........ .....+.++|.+.|+. +.+.. .+...... .... .-....+..|.++++|+...+
T Consensus 79 Ak~~i~~~~~~~~~~--~~~~~~~~~i~lwHG~-~~K~~----g~~~~~~~-~~~~---~~~~~~~~~d~~~~~s~~~~~ 147 (369)
T PF04464_consen 79 AKYIISDSYFPDLIY--FKKRKNQKYIQLWHGI-PLKKI----GYDSPDNK-NYRK---NYKRNYRNYDYFIVSSEFEKE 147 (369)
T ss_dssp EEEEEESS---T--T--S---TTSEEEE--SS---SB------GGG-S----TS-H---HHHHHHTT-SEEEESSHHHHH
T ss_pred CcEEEECCCCCcccc--cccCCCcEEEEecCCC-ccccc----chhccccc-cchh---hhhhhccCCcEEEECCHHHHH
Confidence 578888643333211 2334578999999998 43311 00000000 0000 112357778999999988877
Q ss_pred hhhhhhccccccccccCCCeEEeecCCCCCCC-----cce--------ecCCCCccccccCCchhhhch------h--hH
Q 005365 486 GSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP-----KFN--------IVSPGADMSIYFPYTEEKRRL------K--SF 544 (700)
Q Consensus 486 ~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~-----k~~--------vIp~G~d~~~F~g~~~~~Kgl------~--~L 544 (700)
.+++.++.-. -..+..|.+-++. ... -++.+...++|.|.-+..... . .-
T Consensus 148 ~~~~~f~~~~---------~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~ 218 (369)
T PF04464_consen 148 IFKKAFGYPE---------DKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLD 218 (369)
T ss_dssp HHHHHTT--G---------GGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT-
T ss_pred HHHHHhccCc---------ceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCCcEEEEeeccccccccccccccccccC
Confidence 6666554221 1223344441110 000 023344467888754333222 1 11
Q ss_pred HHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCC
Q 005365 545 HPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE 623 (700)
Q Consensus 545 l~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~-l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E 623 (700)
.+.+..+. ..+..++...-... ...... ....++|.++.. ..+++.++.. +|++|.=
T Consensus 219 ~~~l~~~~----~~~~~li~k~Hp~~-------~~~~~~~~~~~~~i~~~~~------~~~~~~ll~~-aDiLITD---- 276 (369)
T PF04464_consen 219 FEKLNFLL----KNNYVLIIKPHPNM-------KKKFKDFKEDNSNIIFVSD------NEDIYDLLAA-ADILITD---- 276 (369)
T ss_dssp HHHHHHHH----TTTEEEEE--SHHH-------HTT----TT-TTTEEE-TT-------S-HHHHHHT--SEEEES----
T ss_pred HHHHHHHh----CCCcEEEEEeCchh-------hhchhhhhccCCcEEECCC------CCCHHHHHHh-cCEEEEe----
Confidence 22332222 22334443332211 111111 334567887651 2368888886 9999875
Q ss_pred CccHHHHHHHHcCCCEEEc--CC-------CCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 624 AFGLTVVEAMTCGLPTFAT--CK-------GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 624 ~fGl~vlEAMA~GlPVVAT--~~-------GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
++-++.|++.+++|||-- |. |...++ .+...|-.+. +.++|.++|..++
T Consensus 277 -ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 277 -YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp -S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSSS-EES--SHHHHHHHHTTHH
T ss_pred -chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCCCceeC--CHHHHHHHHHhhh
Confidence 677999999999999953 32 333332 2333455664 8899999998877
No 174
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=84.53 E-value=56 Score=34.27 Aligned_cols=91 Identities=12% Similarity=0.132 Sum_probs=49.9
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 621 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~-l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 621 (700)
.+..++.+.+... ...+.+.-+.-.+ +..+.+++. +.-..-+.|-+.-.+. .-...+++. ||.++...-
T Consensus 184 q~~~~l~k~l~~~-g~~~lisfSRRTp-----~~~~s~l~~~l~s~~~i~w~~~d~g~---NPY~~~La~-Adyii~TaD 253 (329)
T COG3660 184 QFASLLVKILENQ-GGSFLISFSRRTP-----DTVKSILKNNLNSSPGIVWNNEDTGY---NPYIDMLAA-ADYIISTAD 253 (329)
T ss_pred HHHHHHHHHHHhC-CceEEEEeecCCc-----HHHHHHHHhccccCceeEeCCCCCCC---CchHHHHhh-cceEEEecc
Confidence 4444444444322 2344454444333 233444443 4434446666542222 245667775 999998854
Q ss_pred CCCccHHHHHHHHcCCCEEEcCCCC
Q 005365 622 YEAFGLTVVEAMTCGLPTFATCKGG 646 (700)
Q Consensus 622 ~E~fGl~vlEAMA~GlPVVAT~~GG 646 (700)
.- .-.-||.+.|+||++-.-.+
T Consensus 254 Si---nM~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 254 SI---NMCSEAASTGKPVFILEPPN 275 (329)
T ss_pred hh---hhhHHHhccCCCeEEEecCC
Confidence 22 23579999999999964433
No 175
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=84.44 E-value=63 Score=34.70 Aligned_cols=81 Identities=12% Similarity=0.000 Sum_probs=48.2
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
...+.++.+... +..+++.|+++ +.+..+++ .+..+ ...+.+.| ..+..++..+++. +|++|..-
T Consensus 195 ~~~~li~~l~~~--~~~ivl~G~~~--e~~~~~~i---~~~~~-~~~~~l~g----~~sL~el~ali~~-a~l~I~~D-- 259 (334)
T TIGR02195 195 HYAELAKRLIDQ--GYQVVLFGSAK--DHPAGNEI---EALLP-GELRNLAG----ETSLDEAVDLIAL-AKAVVTND-- 259 (334)
T ss_pred HHHHHHHHHHHC--CCEEEEEEChh--hHHHHHHH---HHhCC-cccccCCC----CCCHHHHHHHHHh-CCEEEeeC--
Confidence 444555555432 35566666542 22222233 22221 12234666 6678999999997 99999883
Q ss_pred CCccHHHHHHHHcCCCEEE
Q 005365 623 EAFGLTVVEAMTCGLPTFA 641 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVA 641 (700)
+- .+-=|-|.|+|+|+
T Consensus 260 -SG--p~HlAaA~~~P~i~ 275 (334)
T TIGR02195 260 -SG--LMHVAAALNRPLVA 275 (334)
T ss_pred -CH--HHHHHHHcCCCEEE
Confidence 22 34456789999998
No 176
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=82.58 E-value=26 Score=36.70 Aligned_cols=35 Identities=34% Similarity=0.577 Sum_probs=23.7
Q ss_pred cCCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 402 ~~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
+..+||+|.+ |. +.+...|.+-+...|+|-+....
T Consensus 88 ~~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 88 LPEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred cCCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 3458999998 22 22344566677778999887654
No 177
>PLN00164 glucosyltransferase; Provisional
Probab=82.48 E-value=2.5 Score=48.36 Aligned_cols=66 Identities=9% Similarity=-0.016 Sum_probs=44.5
Q ss_pred HHHHHHHHcCCCEEEc----CCCCccccc-ccCCeEEEECC-------CCHHHHHHHHHHHHHhccCCHH-HHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFAT----CKGGPAEII-VNGKSGYHIDP-------YHGEQAAEILVDFFEKCKADPS-YWDKISLGG 693 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT----~~GG~~EiI-~dg~~G~lv~p-------~D~eaLAeaI~~ll~~~~~dp~-~~~~ms~~a 693 (700)
++++||+++|+|+|+- |..-....+ +.-..|+-+.. -+.++++++|.+++ .+++ ..+++++++
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm----~~~~~~~~~~r~~a 443 (480)
T PLN00164 368 NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM----GGGEEEGRKAREKA 443 (480)
T ss_pred chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHH
Confidence 5899999999999995 444445444 33356776642 25789999999998 5543 255555555
Q ss_pred HHH
Q 005365 694 LKR 696 (700)
Q Consensus 694 r~r 696 (700)
.+.
T Consensus 444 ~~~ 446 (480)
T PLN00164 444 AEM 446 (480)
T ss_pred HHH
Confidence 544
No 178
>PLN02555 limonoid glucosyltransferase
Probab=80.07 E-value=7.7 Score=44.40 Aligned_cols=95 Identities=17% Similarity=0.166 Sum_probs=57.4
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC----CCCcccccccC-CeEEEEC
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNG-KSGYHID 661 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~----~GG~~EiI~dg-~~G~lv~ 661 (700)
.+++.+.+ +++..++..- . +.++||.= -| -++++||+.+|+|+|+.. .......+.+. ..|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 35566665 5555555531 1 24455543 22 358999999999999964 33444444443 5676662
Q ss_pred -----C--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 662 -----P--YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 662 -----p--~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
. -+.++++++|.+++ .++ ..++|+++|++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~-~g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGE-KAAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCc-hHHHHHHHHHHH
Confidence 1 25789999999998 443 244555555544
No 179
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=79.48 E-value=37 Score=35.25 Aligned_cols=36 Identities=31% Similarity=0.413 Sum_probs=24.1
Q ss_pred cCCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEecC
Q 005365 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 402 ~~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H~ 437 (700)
+..+||+|.+ |. +.+...|.+-+...|+|-+.....
T Consensus 83 ~~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 83 MPEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred ccCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 3458999988 22 223445666777889998876553
No 180
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=79.42 E-value=2.2 Score=48.81 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=43.3
Q ss_pred cHHHHHHHHcCCCEEEcCC----CCcccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 005365 626 GLTVVEAMTCGLPTFATCK----GGPAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCKADPSYWDKISL 691 (700)
Q Consensus 626 Gl~vlEAMA~GlPVVAT~~----GG~~EiI~dg~~G~lv~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~ 691 (700)
-+++.||+.+|+|+|+-.. -..+..+++...|..++.. +.+.+.++|.+++ +|+.++++..+
T Consensus 351 ~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl----~~~~y~~~a~~ 418 (500)
T PF00201_consen 351 LNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVL----ENPSYKENAKR 418 (500)
T ss_dssp HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHH----HSHHHHHHHHH
T ss_pred cchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHH----hhhHHHHHHHH
Confidence 4689999999999999643 4455555555578887654 5688999999988 78877655443
No 181
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=78.68 E-value=54 Score=31.99 Aligned_cols=36 Identities=19% Similarity=0.480 Sum_probs=26.3
Q ss_pred CCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 273 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 273 ~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
++|.|||.+-.+-| =|-.+.++ .++..|.+.|+.|-
T Consensus 2 ~~~~mki~ITG~PG-------------vGKtTl~~--------ki~e~L~~~g~kvg 37 (179)
T COG1618 2 IKMAMKIFITGRPG-------------VGKTTLVL--------KIAEKLREKGYKVG 37 (179)
T ss_pred CCcceEEEEeCCCC-------------ccHHHHHH--------HHHHHHHhcCceee
Confidence 57899998764332 25566666 78888899999876
No 182
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=76.44 E-value=28 Score=39.91 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=47.0
Q ss_pred cEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCccccccc-CCeEEEECC-
Q 005365 589 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHIDP- 662 (700)
Q Consensus 589 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~d-g~~G~lv~p- 662 (700)
.+++.+ +++..++..- .+.++||.= -| -++++||+++|+|+|+- |..-....+.+ -..|.-+..
T Consensus 344 g~~v~~----w~PQ~~vL~h--~~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~ 413 (477)
T PLN02863 344 GLVIRG----WAPQVAILSH--RAVGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEG 413 (477)
T ss_pred CEEecC----CCCHHHHhcC--CCcCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccC
Confidence 355555 4444444431 013455543 22 35899999999999995 44444444433 257776622
Q ss_pred ----CCHHHHHHHHHHHH
Q 005365 663 ----YHGEQAAEILVDFF 676 (700)
Q Consensus 663 ----~D~eaLAeaI~~ll 676 (700)
-+.+++++++.+++
T Consensus 414 ~~~~~~~~~v~~~v~~~m 431 (477)
T PLN02863 414 ADTVPDSDELARVFMESV 431 (477)
T ss_pred CCCCcCHHHHHHHHHHHh
Confidence 25788889998877
No 183
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=76.33 E-value=18 Score=35.33 Aligned_cols=78 Identities=21% Similarity=0.241 Sum_probs=47.8
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc------CCcEEEEecCCccccCCCCchhhhhccccc
Q 005365 384 WPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL------GVTQCTIAHALEKTKYPDSDIYWKNLDDKY 457 (700)
Q Consensus 384 ~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~------giP~V~t~H~l~~~~~~~~~~~w~~~~~~y 457 (700)
+..+..+.. ....+.+. +||+|.+|.+..+....++++.+ |.++|+. .+....+- .|
T Consensus 75 ~~~l~~~~~-~~~il~r~---rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyI-ES~aRv~~-lS----------- 137 (170)
T PF08660_consen 75 FTTLRAFLQ-SLRILRRE---RPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYI-ESFARVKT-LS----------- 137 (170)
T ss_pred HHHHHHHHH-HHHHHHHh---CCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEE-EeeeecCC-Cc-----------
Confidence 334444433 33344444 89999999999888888888888 8888873 22111110 00
Q ss_pred chhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 458 HFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 458 ~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
++ -++++.-||..++--++.+
T Consensus 138 -lT-----Gklly~~aD~f~VQW~~l~ 158 (170)
T PF08660_consen 138 -LT-----GKLLYPFADRFIVQWEELA 158 (170)
T ss_pred -hH-----HHHHHHhCCEEEEcCHHHH
Confidence 01 1245666999999986554
No 184
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=76.31 E-value=92 Score=35.05 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=48.3
Q ss_pred EEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC-CCC----------ccHH
Q 005365 560 EHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEA----------FGLT 628 (700)
Q Consensus 560 l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~-~E~----------fGl~ 628 (700)
..|...-|..-.-+.++..++.++.| ..|.|.. ++.++++.. .+|++.+|-- -|- +=-.
T Consensus 246 ~rIAVA~D~AF~FyY~~nl~~Lr~~G--Aelv~FS----PL~D~~lP~----~~D~vYlgGGYPElfA~~L~~n~~~~~~ 315 (451)
T COG1797 246 VRIAVARDAAFNFYYPENLELLREAG--AELVFFS----PLADEELPP----DVDAVYLGGGYPELFAEELSANESMRRA 315 (451)
T ss_pred ceEEEEecchhccccHHHHHHHHHCC--CEEEEeC----CcCCCCCCC----CCCEEEeCCCChHHHHHHHhhCHHHHHH
Confidence 34555555433334444455555554 3477776 666678875 4999999842 232 3345
Q ss_pred HHHHHHcCCCEEEcCCCC
Q 005365 629 VVEAMTCGLPTFATCKGG 646 (700)
Q Consensus 629 vlEAMA~GlPVVAT~~GG 646 (700)
+-++.+.|+||.+=+-|=
T Consensus 316 i~~~~~~G~piyaECGGl 333 (451)
T COG1797 316 IKAFAAAGKPIYAECGGL 333 (451)
T ss_pred HHHHHHcCCceEEecccc
Confidence 778889999999977554
No 185
>PLN02764 glycosyltransferase family protein
Probab=75.31 E-value=6.3 Score=44.76 Aligned_cols=87 Identities=9% Similarity=0.026 Sum_probs=53.9
Q ss_pred cCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCC----CCccccccc-CCeEEEECC-----CCHHHH
Q 005365 599 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVN-GKSGYHIDP-----YHGEQA 668 (700)
Q Consensus 599 ~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~----GG~~EiI~d-g~~G~lv~p-----~D~eaL 668 (700)
+++..++..- . +.++||.= +=-++++||+.+|+|+|+-.. -..+..+.+ -..|+.+.. -+.+++
T Consensus 324 W~PQ~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 324 WVQQPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred CCCHHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 5555665541 1 13445553 224689999999999999644 334455533 346666532 277899
Q ss_pred HHHHHHHHHhccCCH-HHHHHHHHHHHH
Q 005365 669 AEILVDFFEKCKADP-SYWDKISLGGLK 695 (700)
Q Consensus 669 AeaI~~ll~~~~~dp-~~~~~ms~~ar~ 695 (700)
++++.+++ .++ +..+++.+++++
T Consensus 398 ~~av~~vm----~~~~~~g~~~r~~a~~ 421 (453)
T PLN02764 398 RDAINSVM----KRDSEIGNLVKKNHTK 421 (453)
T ss_pred HHHHHHHh----cCCchhHHHHHHHHHH
Confidence 99999998 554 445555555544
No 186
>PLN02167 UDP-glycosyltransferase family protein
Probab=73.32 E-value=7.2 Score=44.57 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCEEEcC----CCCccc-ccccCCeEEEECC---------CCHHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATC----KGGPAE-IIVNGKSGYHIDP---------YHGEQAAEILVDFF 676 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~----~GG~~E-iI~dg~~G~lv~p---------~D~eaLAeaI~~ll 676 (700)
++++||+++|+|+|+-. ..-... +++.-..|..+.. -+.++++++|.+++
T Consensus 369 nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 369 NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHh
Confidence 48999999999999964 333332 2444456776642 26789999999998
No 187
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=72.19 E-value=62 Score=33.83 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=23.7
Q ss_pred cCCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 402 ~~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
+..+||+|.+ |. +.+...|.+-+...|+|-+....
T Consensus 84 ~~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 84 VPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred cCCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 4458999998 22 22344566677788999887554
No 188
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=70.92 E-value=28 Score=34.55 Aligned_cols=69 Identities=13% Similarity=0.041 Sum_probs=27.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
+||+++.-....-.--...+++.|+|++..---+...+ ...|+. ...+ -+.+++..|.|.+.|..++
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s----~~~~~~-------~~~~--~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERS----FRRYRR-------FPFL--FRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-------------------------HH--HHHHGGG-SEEEESSHHHH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeecccc----chhhhh-------hHHH--HHHHHHhCCEEEECCHHHH
Confidence 89998874433222233455677999887433222111 111111 1111 2356888999999998876
Q ss_pred Hh
Q 005365 485 AG 486 (700)
Q Consensus 485 ~~ 486 (700)
+.
T Consensus 162 ~r 163 (186)
T PF04413_consen 162 ER 163 (186)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 189
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=69.78 E-value=82 Score=32.94 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=23.5
Q ss_pred cCCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 402 ~~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
+..+||+|.+ |. +.+...|..-+...|||-+....
T Consensus 83 ~~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 83 MDKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred ccCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 3458999998 22 22344566667778999887654
No 190
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=69.65 E-value=14 Score=42.05 Aligned_cols=78 Identities=17% Similarity=0.163 Sum_probs=48.2
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccC-CeEEE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYH 659 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg-~~G~l 659 (700)
.++..+.+ +++..++.. ...+ ||.= +=.++++||+.+|+|+|+- |.......+.+. ..|+-
T Consensus 326 ~~~g~v~~----W~PQ~~iL~----h~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~ 393 (455)
T PLN02152 326 EEVGMIVS----WCSQIEVLR----HRAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVR 393 (455)
T ss_pred cCCeEEEe----eCCHHHHhC----CcccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEE
Confidence 35555666 555555544 2443 4432 2235899999999999995 444444455441 24544
Q ss_pred EC-----CCCHHHHHHHHHHHH
Q 005365 660 ID-----PYHGEQAAEILVDFF 676 (700)
Q Consensus 660 v~-----p~D~eaLAeaI~~ll 676 (700)
+. .-+.++++++|.+++
T Consensus 394 ~~~~~~~~~~~e~l~~av~~vm 415 (455)
T PLN02152 394 VRENSEGLVERGEIRRCLEAVM 415 (455)
T ss_pred eecCcCCcCcHHHHHHHHHHHH
Confidence 42 136789999999998
No 191
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=69.06 E-value=71 Score=34.22 Aligned_cols=103 Identities=15% Similarity=0.105 Sum_probs=55.9
Q ss_pred HHHHHHHHCCCceeeccEEEecc--CCCCCCCCCccc--eeEecCccceEEEEecCCCcccccccccccccchhhHHHHH
Q 005365 316 EMLLRIKQQGLDITPQILIITRL--LPDAVGTTCGQR--LEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYT 391 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~--~p~~~~~~~~~~--~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~ 391 (700)
.|.+.|.++||.|- |+.=. -|...|.....+ .......+++-|-.+|.+...| -+..-+
T Consensus 70 ~L~~~l~~~G~rVa----VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG-------------GlS~at 132 (323)
T COG1703 70 ALGRELRERGHRVA----VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG-------------GLSRAT 132 (323)
T ss_pred HHHHHHHHCCcEEE----EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch-------------hhhHHH
Confidence 67788899999999 66532 222223222222 2233334566666676665432 122223
Q ss_pred HHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 392 EDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
.++...+... .+|+|+.-+...+..=.-++..-.+-+++...+.
T Consensus 133 ~~~i~~ldAa---G~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 133 REAIKLLDAA---GYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred HHHHHHHHhc---CCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 3444444443 7999999776555443344444455555555543
No 192
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=69.02 E-value=12 Score=39.44 Aligned_cols=71 Identities=13% Similarity=0.098 Sum_probs=47.8
Q ss_pred hhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC-CEEEcC--CCCcccccccCCeEEEECCCCHHHHHHHHH
Q 005365 602 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATC--KGGPAEIIVNGKSGYHIDPYHGEQAAEILV 673 (700)
Q Consensus 602 ~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-PVVAT~--~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~ 673 (700)
..+....|++ +...++|.-...+..-++|||++|| |||.++ .=...+++.=....+.++..+..++-+.|+
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~ 300 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR 300 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence 3456677775 8788888777778889999999998 666654 233455564355677777666655555443
No 193
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=68.68 E-value=1.6e+02 Score=31.01 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=49.4
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP 619 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 619 (700)
....+.+++..+.... +.+++++......+.. ..+++.+.+.-...| +. ..+..|+...+++ ++++|--
T Consensus 189 ~~~~l~~~l~~l~~~~-g~~v~~i~~~~~~D~~---~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~~~vI~~ 257 (298)
T TIGR03609 189 RLLRLLRALDRLQRDT-GAFVLFLPFQQPQDLP---LARALRDQLLGPAEV--LS----PLDPEELLGLFAS-ARLVIGM 257 (298)
T ss_pred HHHHHHHHHHHHHHhh-CCeEEEEeCCcchhHH---HHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-CCEEEEe
Confidence 3456667777776543 3334333321112222 233333333322333 33 4456899999997 9987766
Q ss_pred CCCCCccHHHHHHHHcCCCEEEc
Q 005365 620 ALYEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 620 S~~E~fGl~vlEAMA~GlPVVAT 642 (700)
.+. ..+=|+.+|+|+++-
T Consensus 258 RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 258 RLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred chH-----HHHHHHHcCCCEEEe
Confidence 442 567789999999974
No 194
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=67.67 E-value=5.5 Score=39.38 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=26.8
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
|||+||+..|.-+ ++++++..++||+|+ -++|..
T Consensus 1 mKIaiIgAsG~~G-------------------------s~i~~EA~~RGHeVT----AivRn~ 34 (211)
T COG2910 1 MKIAIIGASGKAG-------------------------SRILKEALKRGHEVT----AIVRNA 34 (211)
T ss_pred CeEEEEecCchhH-------------------------HHHHHHHHhCCCeeE----EEEeCh
Confidence 8999999877622 167778899999999 887763
No 195
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=65.75 E-value=16 Score=43.53 Aligned_cols=106 Identities=21% Similarity=0.349 Sum_probs=54.2
Q ss_pred HHHHHHHHHhhcCCCC-------CCchHHHHHHhhcCCccccCccHHHHHHHHHHHHHhhcC-----CCccchhhhhcCC
Q 005365 206 HVLRKAEEYLTTVVPE-------TPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEA-----PDPCTLETFLGRI 273 (700)
Q Consensus 206 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----p~~~~~~~~~~~~ 273 (700)
+-.++|.-.|+..-.. .-|.+ +.|.+|==+-||--++. .+.++-|..-+.- |+.+..-..-..-
T Consensus 291 ~~~~~~~~~l~~~~~k~~l~l~~~d~~~--~~~~~l~~~~g~~~~~~--~~~f~~~~~~i~~~p~g~~~~~~~~~~~~~~ 366 (652)
T PRK02122 291 KLIRRAVVWLCQKLGKPILKLTDKDYNE--NGLSDLLAQYGSAYNVN--IKVFNDLQHTITGWPGGKPNADDTNRPERAL 366 (652)
T ss_pred HHHHHHHHHHHHHhCCCcccCchhhhhh--cCHHHHHHHhCcHHHHH--HHHHHHHHHHhcCCCCCCCCcccccCCcccc
Confidence 3567888877754321 22222 22444333446633332 3455556555532 2211111111223
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEecc
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
|..+||+++|||-- ..++| .||. ...|+++||+|+ |+++|..
T Consensus 367 ~~~~rvLv~spHPD---Devi~---~GGT---------------larl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 367 PYPKRVIIFSPHPD---DDVIS---MGGT---------------FRRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred cCCceEEEEEeCCC---chHhh---hHHH---------------HHHHHHCCCcEE--EEEecCC
Confidence 56799999999942 23343 3552 235799999999 4445543
No 196
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=64.04 E-value=46 Score=32.43 Aligned_cols=81 Identities=15% Similarity=0.132 Sum_probs=42.8
Q ss_pred CCeEEEEcCCCchHHHH--HHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHH
Q 005365 405 KPDLIIGNYSDGNIVAS--LLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~--lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~ 482 (700)
.+|+|.+.. ..++... +.-...++|.++-+|.-.. .|+.+...-. +..|.+. .....-.||.|+.+|..
T Consensus 59 ~~dll~aTs-mldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~r--d~~~~~~-----ni~saLaAD~v~FNS~~ 129 (168)
T PF12038_consen 59 SYDLLFATS-MLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQER--DFQYGMN-----NIYSALAADRVVFNSAF 129 (168)
T ss_pred CCCEEEeec-cccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCccc--cccHHHH-----HHHHHHhceeeeecchh
Confidence 689999944 2232221 1223357899999996432 2333221111 1122221 22345569999999987
Q ss_pred HHHhhhhhhccc
Q 005365 483 EIAGSKDTVGQY 494 (700)
Q Consensus 483 ~~~~~k~~~~~y 494 (700)
..+..-+.+.++
T Consensus 130 nr~sFL~~~~~f 141 (168)
T PF12038_consen 130 NRDSFLDGIPSF 141 (168)
T ss_pred hHHHHHHHHHHH
Confidence 665544444433
No 197
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=63.08 E-value=22 Score=31.15 Aligned_cols=74 Identities=12% Similarity=0.085 Sum_probs=50.1
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChhH--HHHHHHccCcEEEeCCCCC---CccHHHHHHHHcCCCEEEcCCCCcc
Q 005365 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGE--LYRYICDTKGAFVQPALYE---AFGLTVVEAMTCGLPTFATCKGGPA 648 (700)
Q Consensus 574 ~~~l~~li~~l~L~~~V~flG~~~d~v~~~e--l~~~la~~aDvfV~PS~~E---~fGl~vlEAMA~GlPVVAT~~GG~~ 648 (700)
...+++.++++|.. +.++|... .....+ +...+.. +|+.|++.-+= ..-.+--+|-..|+|++-++..|..
T Consensus 12 ~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~ 87 (97)
T PF10087_consen 12 ERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVS 87 (97)
T ss_pred HHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHH
Confidence 35678888888764 44554333 333344 8888886 99999987543 3444556788899999999876665
Q ss_pred ccc
Q 005365 649 EII 651 (700)
Q Consensus 649 EiI 651 (700)
.+.
T Consensus 88 ~l~ 90 (97)
T PF10087_consen 88 SLE 90 (97)
T ss_pred HHH
Confidence 543
No 198
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=62.20 E-value=38 Score=35.48 Aligned_cols=55 Identities=15% Similarity=-0.010 Sum_probs=33.4
Q ss_pred CcEEEeCCCC--CCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHH
Q 005365 613 KGAFVQPALY--EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 675 (700)
Q Consensus 613 aDvfV~PS~~--E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~l 675 (700)
+|++|.=-.- -++--++--|+.+|+|||.-+..-... + +-.+ .+.+++.+.+.++
T Consensus 198 i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~----~--~~~~--~~~~el~~~l~~~ 254 (256)
T TIGR00715 198 IDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP----G--VAIF--DDISQLNQFVARL 254 (256)
T ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----C--CccC--CCHHHHHHHHHHh
Confidence 5666664322 256667888999999999976553211 0 0122 3677776666554
No 199
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=61.95 E-value=72 Score=30.73 Aligned_cols=68 Identities=18% Similarity=0.234 Sum_probs=37.1
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCCchHH-HHHHHHh--c-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHH
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSDGNIV-ASLLAHK--L-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLI 468 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~~~lv-a~lla~~--~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~ 468 (700)
.+.+.+.+. +||+|++.++..+.+ ...+.++ . ++|+++.+-++...- ..|
T Consensus 80 ~l~~~l~~~---~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-----~~W------------------ 133 (169)
T PF06925_consen 80 RLIRLLREF---QPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-----PFW------------------ 133 (169)
T ss_pred HHHHHHhhc---CCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-----cCe------------------
Confidence 344444443 899999966654444 3323322 3 477665444321100 122
Q ss_pred HHhhCCEEEecCHHHHHh
Q 005365 469 AMNHTDFIITSTFQEIAG 486 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~ 486 (700)
.-..+|..++.|++.++.
T Consensus 134 ~~~~~D~y~Vase~~~~~ 151 (169)
T PF06925_consen 134 IHPGVDRYFVASEEVKEE 151 (169)
T ss_pred ecCCCCEEEECCHHHHHH
Confidence 234589999999766553
No 200
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=61.33 E-value=1.1e+02 Score=31.81 Aligned_cols=34 Identities=32% Similarity=0.567 Sum_probs=24.4
Q ss_pred CCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEecCC
Q 005365 405 KPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 405 ~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H~l 438 (700)
+||+|.+ |. ..+...|.+-+..+|+|-|...+..
T Consensus 83 ~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 83 RPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred CCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 4999998 22 2245567777888999998876654
No 201
>PLN02534 UDP-glycosyltransferase
Probab=58.74 E-value=47 Score=38.23 Aligned_cols=77 Identities=9% Similarity=0.076 Sum_probs=44.7
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcE--EEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccc-cCCeEEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIV-NGKSGYHI 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDv--fV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~-dg~~G~lv 660 (700)
.++.+.| +++..++.. ..++ ||.- +=.++++||+++|+|+|+-...+ ....+. .-+.|+-+
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 3455556 555555544 2444 4443 23469999999999999965432 222222 11223322
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 005365 661 D---------------PYHGEQAAEILVDFF 676 (700)
Q Consensus 661 ~---------------p~D~eaLAeaI~~ll 676 (700)
. --+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025789999999998
No 202
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=58.17 E-value=1.8e+02 Score=30.89 Aligned_cols=81 Identities=15% Similarity=0.096 Sum_probs=48.3
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
...+.++.+... +..+++.++++. +. +...++.+.. ++ ..+.| ..+..|+..+++. |+++|..
T Consensus 199 ~~~~l~~~l~~~--~~~~vl~~g~~~-e~---~~~~~i~~~~--~~-~~l~g----~~sL~el~ali~~-a~l~I~~--- 261 (319)
T TIGR02193 199 RWRELARLLLAR--GLQIVLPWGNDA-EK---QRAERIAEAL--PG-AVVLP----KMSLAEVAALLAG-ADAVVGV--- 261 (319)
T ss_pred HHHHHHHHHHHC--CCeEEEeCCCHH-HH---HHHHHHHhhC--CC-CeecC----CCCHHHHHHHHHc-CCEEEeC---
Confidence 445555555432 445555544322 22 2233333322 22 35667 6678999999997 9999998
Q ss_pred CCccHHHHHHHHcCCCEEEc
Q 005365 623 EAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVAT 642 (700)
++- .+-=|-|+|+|+|+-
T Consensus 262 DSg--p~HlAaa~g~P~i~l 279 (319)
T TIGR02193 262 DTG--LTHLAAALDKPTVTL 279 (319)
T ss_pred CCh--HHHHHHHcCCCEEEE
Confidence 333 344466889999983
No 203
>PLN02207 UDP-glycosyltransferase
Probab=57.93 E-value=24 Score=40.30 Aligned_cols=50 Identities=14% Similarity=0.128 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCEEEcC----CCCccccccc-CCeEEEEC---------CCCHHHHHHHHHHHH
Q 005365 627 LTVVEAMTCGLPTFATC----KGGPAEIIVN-GKSGYHID---------PYHGEQAAEILVDFF 676 (700)
Q Consensus 627 l~vlEAMA~GlPVVAT~----~GG~~EiI~d-g~~G~lv~---------p~D~eaLAeaI~~ll 676 (700)
++++||+.+|+|+|+-. .-.....+.+ -..|.-+. .-+.++++++|.+++
T Consensus 361 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 361 NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHH
Confidence 48899999999999964 3444444333 34565331 126789999999998
No 204
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=57.59 E-value=1.5e+02 Score=31.18 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=22.3
Q ss_pred CCCCeEEEE--cC----------CCchHHHHHHHHhcCCcEEEEec
Q 005365 403 QGKPDLIIG--NY----------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 403 ~~~pDlIh~--h~----------~~~~lva~lla~~~giP~V~t~H 436 (700)
..+||+|++ |. +.+...|.+-+...|||-+....
T Consensus 82 ~~~pDLViSGIN~G~NlG~d~v~ySGTVgAA~Ea~~~GIPsIAvS~ 127 (266)
T PRK13934 82 GRKYDLVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPAVAYSA 127 (266)
T ss_pred cCCCCeEEecCccCCCCCcCcccccHhHHHHHHHHhcCCCEEEEec
Confidence 348999988 22 12334566667778999887554
No 205
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=56.89 E-value=40 Score=35.28 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=27.0
Q ss_pred CCeEEEEc----CCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 405 KPDLIIGN----YSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 405 ~pDlIh~h----~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
.||+|.+- ..+.+.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 59999992 24567799999999999998866544
No 206
>PRK12342 hypothetical protein; Provisional
Probab=55.69 E-value=36 Score=35.58 Aligned_cols=42 Identities=21% Similarity=0.144 Sum_probs=30.5
Q ss_pred HHHHHHHHcCCCCeEEEEc----CCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 394 VAVEIAKELQGKPDLIIGN----YSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h----~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
+...+++. .||+|.+- ..+.+.++..+|..+|+|++..+..+
T Consensus 101 La~~i~~~---~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 101 LAAAIEKI---GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred HHHHHHHh---CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 34444443 59999982 24557789999999999999877654
No 207
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=55.55 E-value=1.6e+02 Score=31.09 Aligned_cols=92 Identities=12% Similarity=0.165 Sum_probs=45.3
Q ss_pred EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC---CCCccHHHHHHHHcCCCE
Q 005365 563 KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL---YEAFGLTVVEAMTCGLPT 639 (700)
Q Consensus 563 ~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~---~E~fGl~vlEAMA~GlPV 639 (700)
............+.+++.++++|+. +.... ..+..+.....+-+....|+++.+.. ...+...+..+..+++||
T Consensus 138 ~~~~~~~~~~~~~~~~~~a~~~g~~--l~~~~-v~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv 214 (294)
T PF04392_consen 138 YDPSEPNSVAQIEQLRKAAKKLGIE--LVEIP-VPSSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPV 214 (294)
T ss_dssp EETT-HHHHHHHHHHHHHHHHTT-E--EEEEE-ESSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--E
T ss_pred ecCCCccHHHHHHHHHHHHHHcCCE--EEEEe-cCcHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCE
Confidence 3333332346678888888888874 33322 12222233444444445788777743 234444556777899999
Q ss_pred EEcCCCCcccccccCCe-EEEEC
Q 005365 640 FATCKGGPAEIIVNGKS-GYHID 661 (700)
Q Consensus 640 VAT~~GG~~EiI~dg~~-G~lv~ 661 (700)
+++.. ..+.+|.- |+.++
T Consensus 215 ~~~~~----~~v~~Gal~~~~~~ 233 (294)
T PF04392_consen 215 FGSSD----FYVKAGALGGYSVD 233 (294)
T ss_dssp EESSH----HHHCTT-SEEEE--
T ss_pred EECCH----HHhcCCcEEEEccC
Confidence 99753 33444443 44443
No 208
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=53.51 E-value=2.3e+02 Score=29.64 Aligned_cols=35 Identities=29% Similarity=0.538 Sum_probs=23.8
Q ss_pred cCCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 402 ~~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
+..+||+|.+ |. +.+...|..-+...|+|-+....
T Consensus 79 ~~~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 124 (250)
T PRK00346 79 LDPKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSL 124 (250)
T ss_pred ccCCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 3348999988 22 22345566677788999887655
No 209
>PRK06988 putative formyltransferase; Provisional
Probab=53.02 E-value=67 Score=34.60 Aligned_cols=18 Identities=28% Similarity=0.586 Sum_probs=11.7
Q ss_pred HHHHHHHCCCceeeccEEEec
Q 005365 317 MLLRIKQQGLDITPQILIITR 337 (700)
Q Consensus 317 La~~L~~~GheV~~~i~VvT~ 337 (700)
..+.|.+.|++|. .|+|.
T Consensus 17 ~L~~L~~~~~~i~---~Vvt~ 34 (312)
T PRK06988 17 CLQVLLARGVDVA---LVVTH 34 (312)
T ss_pred HHHHHHhCCCCEE---EEEcC
Confidence 4456778899976 34553
No 210
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=52.50 E-value=1e+02 Score=31.23 Aligned_cols=90 Identities=17% Similarity=0.134 Sum_probs=48.5
Q ss_pred hhhchh--hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCc
Q 005365 537 EKRRLK--SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKG 614 (700)
Q Consensus 537 ~~Kgl~--~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aD 614 (700)
+.|+.. ...+.++.+.... ..+++.|++...+. +...++.+... ...+.+.| ..+..|+..+++. +|
T Consensus 117 ~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~~~~---~~~~~~~~~~~-~~~~~~~~----~~~l~e~~ali~~-a~ 185 (247)
T PF01075_consen 117 PSKRWPAEKWAELIERLKERG--YRVVLLGGPEEQEK---EIADQIAAGLQ-NPVINLAG----KTSLRELAALISR-AD 185 (247)
T ss_dssp GGGS--HHHHHHHHHHHCCCT---EEEE--SSHHHHH---HHHHHHHTTHT-TTTEEETT----TS-HHHHHHHHHT-SS
T ss_pred ccccCCHHHHHHHHHHHHhhC--ceEEEEccchHHHH---HHHHHHHHhcc-cceEeecC----CCCHHHHHHHHhc-CC
Confidence 445433 3555555554432 44555555432111 22223332221 12578888 5678999999997 99
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEc
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT 642 (700)
++|.+ ++. .+-=|.|.|+|+|+-
T Consensus 186 ~~I~~---Dtg--~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 186 LVIGN---DTG--PMHLAAALGTPTVAL 208 (247)
T ss_dssp EEEEE---SSH--HHHHHHHTT--EEEE
T ss_pred EEEec---CCh--HHHHHHHHhCCEEEE
Confidence 99998 333 455578899999994
No 211
>COG1647 Esterase/lipase [General function prediction only]
Probab=52.17 E-value=1.4e+02 Score=30.64 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 005365 391 TEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 391 ~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H 436 (700)
+.+..+.+... +-.-|..+-.+.++..+..++....++-++..-
T Consensus 72 v~d~Y~~L~~~--gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~ 115 (243)
T COG1647 72 VEDGYRDLKEA--GYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMC 115 (243)
T ss_pred HHHHHHHHHHc--CCCeEEEEeecchhHHHHHHHhhCCccceeeec
Confidence 33444555433 233455666799999999999988765555443
No 212
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=50.19 E-value=2.8e+02 Score=27.76 Aligned_cols=47 Identities=19% Similarity=0.226 Sum_probs=34.8
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 643 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~ 643 (700)
.++..+.. ..+..++..+++. ++++|..... ..+=|+++|+|+|+-+
T Consensus 237 ~~~~~~~~---~~~~~~~~~~~~~-~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 237 FNVIIIDY---SLSPDELLELISQ-ADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred cceeEecC---CCCHHHHHHHHhc-CCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 34444443 4557899999996 9999887653 4566899999999854
No 213
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=49.38 E-value=17 Score=33.39 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=20.2
Q ss_pred cCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEecc
Q 005365 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 299 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
++|-..-.+ .|+++|+++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 356555556 67788899999999 88754
No 214
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=47.23 E-value=1.1e+02 Score=33.07 Aligned_cols=87 Identities=16% Similarity=0.172 Sum_probs=53.7
Q ss_pred hhhchh--hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCc
Q 005365 537 EKRRLK--SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKG 614 (700)
Q Consensus 537 ~~Kgl~--~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aD 614 (700)
..|+.. ...+.++.+.... ..+++.|++ ++. +...++.+.++ +.+.+.| ..+..|+..+++. ||
T Consensus 188 ~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~--~e~---e~~~~i~~~~~--~~~~l~~----k~sL~e~~~li~~-a~ 253 (334)
T COG0859 188 SAKRWPLEHYAELAELLIAKG--YQVVLFGGP--DEE---ERAEEIAKGLP--NAVILAG----KTSLEELAALIAG-AD 253 (334)
T ss_pred ccCCCCHHHHHHHHHHHHHCC--CEEEEecCh--HHH---HHHHHHHHhcC--CccccCC----CCCHHHHHHHHhc-CC
Confidence 445443 4555555555543 566666665 332 23334443332 2233666 7788999999997 99
Q ss_pred EEEeCCCCCCccHHHHHHHHcCCCEEEc
Q 005365 615 AFVQPALYEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 615 vfV~PS~~E~fGl~vlEAMA~GlPVVAT 642 (700)
++|.+. + | .+-=|-|.|+|+|+-
T Consensus 254 l~I~~D---S-g-~~HlAaA~~~P~I~i 276 (334)
T COG0859 254 LVIGND---S-G-PMHLAAALGTPTIAL 276 (334)
T ss_pred EEEccC---C-h-HHHHHHHcCCCEEEE
Confidence 999883 2 2 344477899999994
No 215
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=42.88 E-value=2.2e+02 Score=32.60 Aligned_cols=39 Identities=26% Similarity=0.483 Sum_probs=28.4
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
..+|+++. ||.| |-..-.+ +||+.|+.+|+.|| +++...
T Consensus 9 ~~HVvl~P---fpaq----------GHi~P~l--------~LAk~La~~G~~VT----fv~T~~ 47 (477)
T PLN02863 9 GTHVLVFP---FPAQ----------GHMIPLL--------DLTHRLALRGLTIT----VLVTPK 47 (477)
T ss_pred CCEEEEec---Cccc----------chHHHHH--------HHHHHHHhCCCEEE----EEeCCC
Confidence 35788885 5543 6666777 67777899999999 877653
No 216
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=42.59 E-value=2e+02 Score=31.51 Aligned_cols=42 Identities=19% Similarity=0.135 Sum_probs=27.5
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H 436 (700)
.++.++.++ |-.-+..+-.+.++..|.+.+.....|+....+
T Consensus 164 ~Ll~Wl~~~--G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 164 ALLHWLERE--GYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred HHHHHHHhc--CCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 344555554 334555565788999898888877777665444
No 217
>PLN02764 glycosyltransferase family protein
Probab=42.59 E-value=2.7e+02 Score=31.74 Aligned_cols=26 Identities=23% Similarity=0.313 Sum_probs=19.5
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEE
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~ 433 (700)
+||.|++- . ..++.-+|+++|||.+.
T Consensus 108 ~~~~iV~D-~--~~w~~~vA~~~gIP~~~ 133 (453)
T PLN02764 108 EPDLIFFD-F--AHWIPEVARDFGLKTVK 133 (453)
T ss_pred CCCEEEEC-C--chhHHHHHHHhCCCEEE
Confidence 68988885 3 33677788999999765
No 218
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=42.29 E-value=1.5e+02 Score=27.69 Aligned_cols=64 Identities=19% Similarity=0.080 Sum_probs=32.6
Q ss_pred HHHHccCcEEEeCCCCCCccH------HH---HHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGL------TV---VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl------~v---lEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
.++.+ ||+.|.- ||- +. -=|.|.|+|.|.-.-....--+.+-.+.-.+-..+|++..+.+..++
T Consensus 68 ~li~~-aDvVVvr-----FGekYKQWNaAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et~~Qvv~iL~Yv~ 140 (141)
T PF11071_consen 68 TLIEK-ADVVVVR-----FGEKYKQWNAAFDAGYAAALGKPLITLHPEELHHPLKEVDAAALAVAETPEQVVEILRYVL 140 (141)
T ss_pred HHHhh-CCEEEEE-----echHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHhhHhhhCCHHHHHHHHHHHh
Confidence 34554 8887775 331 12 23578999999864333222222111112222346666666665554
No 219
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=41.48 E-value=30 Score=38.53 Aligned_cols=38 Identities=24% Similarity=0.573 Sum_probs=27.0
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT 345 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~ 345 (700)
|||++|....+ |+++|.. |++.||+|. .|+| +|+..|.
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~ 38 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGK 38 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCC
Confidence 79999986654 7888865 899999986 2444 4555443
No 220
>PLN00016 RNA-binding protein; Provisional
Probab=40.18 E-value=29 Score=38.13 Aligned_cols=20 Identities=20% Similarity=0.287 Sum_probs=16.7
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.|++.|.++||+|+ ++++..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 56778899999999 998764
No 221
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=39.14 E-value=3e+02 Score=28.63 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=25.1
Q ss_pred HHHHHHHHcCCCCeEEEE--cCCCc--hHHHHHHHHhcCCcEEEEec
Q 005365 394 VAVEIAKELQGKPDLIIG--NYSDG--NIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~--h~~~~--~lva~lla~~~giP~V~t~H 436 (700)
+...+.++ ++++|+- |.+.. .--+..+++..|+|++---.
T Consensus 57 l~~~l~~~---~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 57 LAAYLREE---GIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred HHHHHHHC---CCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 34445554 7898877 33222 22566778889999987544
No 222
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=38.44 E-value=19 Score=28.96 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=26.7
Q ss_pred ccccccchHHHH---HHHHHHhHHHHHHHHHHHHhcCCC
Q 005365 5 ALTRVHSLRERL---DETLSAHRNEILALLSRIEGKGKG 40 (700)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 40 (700)
.+.|+++|...+ +....-...+|.+||.+.+++||=
T Consensus 13 ~l~RIh~mLkmf~~~~~~~~~s~~eL~~fL~~lv~e~~L 51 (60)
T PF08672_consen 13 PLDRIHSMLKMFPKDPGGYDISLEELQEFLDRLVEEGKL 51 (60)
T ss_dssp EHHHHHHHHHHH-GGG--TT--HHHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHCCcE
Confidence 578999999888 344466778999999999998873
No 223
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=38.33 E-value=3.2e+02 Score=31.25 Aligned_cols=87 Identities=7% Similarity=0.027 Sum_probs=55.2
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC-CEEEcCC--CCcccccccCCeEEEECCCCHHHHHHHHHHHHHhc
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCK--GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 679 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-PVVAT~~--GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~ 679 (700)
....+.+++ +-..++|.-++...-.++||+.+|| |||-++. ....+++.-..-++.++. +++-+.|.+.+..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~---~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPE---KDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEH---HHhhhHHHHHHHh-
Confidence 456677776 8889999999999999999999998 7888864 444555544445566653 3333334444421
Q ss_pred cCCHHHHHHHHHHHHH
Q 005365 680 KADPSYWDKISLGGLK 695 (700)
Q Consensus 680 ~~dp~~~~~ms~~ar~ 695 (700)
.-.....+|.++-..
T Consensus 410 -i~~~~~~~m~~~v~~ 424 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIR 424 (464)
T ss_pred -cCHHHHHHHHHHHHH
Confidence 223344555555443
No 224
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=38.08 E-value=1.7e+02 Score=31.11 Aligned_cols=43 Identities=9% Similarity=0.039 Sum_probs=34.3
Q ss_pred cEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEE
Q 005365 589 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 641 (700)
Q Consensus 589 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVA 641 (700)
.+.+.| ..+..|+..+++. ||++|..- +..+-=|-|+|+|+|+
T Consensus 235 ~~~l~g----~~sL~elaali~~-a~l~I~nD-----SGp~HlA~A~g~p~va 277 (322)
T PRK10964 235 YVEVLP----KLSLEQVARVLAG-AKAVVSVD-----TGLSHLTAALDRPNIT 277 (322)
T ss_pred cceecC----CCCHHHHHHHHHh-CCEEEecC-----CcHHHHHHHhCCCEEE
Confidence 466777 6678999999997 99999983 2245557889999999
No 225
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=37.22 E-value=30 Score=37.40 Aligned_cols=19 Identities=32% Similarity=0.403 Sum_probs=15.4
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.++..|++.||+|+ ++.+.
T Consensus 16 ~~A~~L~~~G~~V~----~~~r~ 34 (341)
T PRK08229 16 YLGGRLAAAGADVT----LIGRA 34 (341)
T ss_pred HHHHHHHhcCCcEE----EEecH
Confidence 46677899999999 88763
No 226
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=36.57 E-value=3e+02 Score=26.45 Aligned_cols=121 Identities=16% Similarity=0.177 Sum_probs=61.4
Q ss_pred hhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc----cCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC
Q 005365 568 LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD----TKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 643 (700)
Q Consensus 568 ~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~----~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~ 643 (700)
..+.+..++..+..+++|++-.++..+.. -..+++.+++.. .+++|+.-+-.++ .+.-+=|-..-+|||+-.
T Consensus 10 ~SD~~~~~~a~~~L~~~gi~~~~~V~saH---R~p~~l~~~~~~~~~~~~~viIa~AG~~a-~Lpgvva~~t~~PVIgvP 85 (150)
T PF00731_consen 10 TSDLPIAEEAAKTLEEFGIPYEVRVASAH---RTPERLLEFVKEYEARGADVIIAVAGMSA-ALPGVVASLTTLPVIGVP 85 (150)
T ss_dssp GGGHHHHHHHHHHHHHTT-EEEEEE--TT---TSHHHHHHHHHHTTTTTESEEEEEEESS---HHHHHHHHSSS-EEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEEecc---CCHHHHHHHHHHhccCCCEEEEEECCCcc-cchhhheeccCCCEEEee
Confidence 34456778888888888887777777742 234667777653 2467777653322 233333444578888742
Q ss_pred --CC---Ccc---cccc--cCCeEEEECCCC---HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 644 --KG---GPA---EIIV--NGKSGYHIDPYH---GEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 644 --~G---G~~---EiI~--dg~~G~lv~p~D---~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
.| |.. -+++ .|.-=-.+..++ ..-+|-.|..+ .|+++|+++...-.+..
T Consensus 86 ~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa~-----~d~~l~~kl~~~~~~~~ 147 (150)
T PF00731_consen 86 VSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILAL-----KDPELREKLRAYREKMK 147 (150)
T ss_dssp E-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHHT-----T-HHHHHHHHHHHHHHH
T ss_pred cCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHH
Confidence 11 222 1221 121111222223 34444444443 79999999877655443
No 227
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.84 E-value=33 Score=30.93 Aligned_cols=33 Identities=36% Similarity=0.698 Sum_probs=27.9
Q ss_pred HHhhcCCcccc----CccHHHHHHHHHHHHHhhcCCC
Q 005365 230 RFQEIGLERGW----GDTAERALEMIQLLLDLLEAPD 262 (700)
Q Consensus 230 ~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~p~ 262 (700)
+||+|||..-| |.+|+-+-|++....+-+.+|.
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~N 61 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAPN 61 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHccC
Confidence 59999999999 7789999999988877666653
No 228
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=34.78 E-value=2.8e+02 Score=27.85 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=27.6
Q ss_pred HHHccCc-EEEeCCCCCCccHHHHHHHHcCCCEEEcCCC
Q 005365 608 YICDTKG-AFVQPALYEAFGLTVVEAMTCGLPTFATCKG 645 (700)
Q Consensus 608 ~la~~aD-vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G 645 (700)
.++...| +.+.|...+...-.+-++...|.|||..+.+
T Consensus 51 ~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 51 AISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3333455 5556666677777788889999999998777
No 229
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=34.56 E-value=4.4e+02 Score=25.57 Aligned_cols=106 Identities=16% Similarity=0.244 Sum_probs=53.1
Q ss_pred HHHHHHHHCCCceeeccEEEecc-CCCCCCCCCccceeEecCccceEEEEecCCC-cccccccccccccchhhHHHHHHH
Q 005365 316 EMLLRIKQQGLDITPQILIITRL-LPDAVGTTCGQRLEKVYGTKYSDILRVPFRT-EKGVVRKWISRFEVWPYLETYTED 393 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~-~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~-~~~~~~~~lsr~~i~~~l~~f~~~ 393 (700)
..+++|+.+|+.|. =+... .++..+..|.-.++.+.....+.|.- ..++ ..++ .+-|. . ...
T Consensus 18 ~~a~~L~~~G~rv~----G~vQ~~~~~~~~~~~~m~l~dl~~G~~~~IsQ-~LG~gs~gC--------rLD~~--~-La~ 81 (159)
T PF10649_consen 18 AFAARLRARGVRVA----GLVQRNTADGDGGRCDMDLRDLPSGRRIRISQ-DLGPGSRGC--------RLDPG--A-LAE 81 (159)
T ss_pred HHHHHHHhCCCeEE----EEeccccCCCCCCccceEEEECCCCCEEEEee-ccCCCCccc--------ccCHH--H-HHH
Confidence 77788899999987 33322 23333444555555554432222221 1111 1110 01111 1 112
Q ss_pred HHHHHHHHcCCCCeEEEEcCCC------chHH-HHHHHHhcCCcEEEEecC
Q 005365 394 VAVEIAKELQGKPDLIIGNYSD------GNIV-ASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 394 ~~~~l~~~~~~~pDlIh~h~~~------~~lv-a~lla~~~giP~V~t~H~ 437 (700)
+...+.+.+...||+++.|-+. .++. ....+-..|||+++.+..
T Consensus 82 A~~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 82 ASAALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHHHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 3334444445589999997732 2332 222344569999998875
No 230
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=34.45 E-value=45 Score=36.98 Aligned_cols=52 Identities=15% Similarity=0.309 Sum_probs=37.3
Q ss_pred cCCCccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEecc
Q 005365 259 EAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 259 ~~p~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+|.+..-..|-+.-+..|||+|+...|+ +.. .+++.|.++||+|. ++++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~--------------IG~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGY--------------IGK-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcH--------------HHH-----------HHHHHHHHCCCEEE----EEEec
Confidence 35666667778888787899988865544 222 56677889999998 88775
Q ss_pred C
Q 005365 339 L 339 (700)
Q Consensus 339 ~ 339 (700)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 3
No 231
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=34.41 E-value=1.6e+02 Score=30.04 Aligned_cols=33 Identities=30% Similarity=0.395 Sum_probs=21.5
Q ss_pred CCeEEEEcC--CCchHHHHHHHHh-cCCcEEE-EecC
Q 005365 405 KPDLIIGNY--SDGNIVASLLAHK-LGVTQCT-IAHA 437 (700)
Q Consensus 405 ~pDlIh~h~--~~~~lva~lla~~-~giP~V~-t~H~ 437 (700)
+.|++.+-. -..++++..++++ +|+|.++ .+++
T Consensus 66 ~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~ 102 (225)
T COG0569 66 DADAVVAATGNDEVNSVLALLALKEFGVPRVIARARN 102 (225)
T ss_pred cCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEecC
Confidence 789888844 3456666667655 8887654 4544
No 232
>COG4195 Phage-related replication protein [General function prediction only]
Probab=32.56 E-value=52 Score=32.55 Aligned_cols=58 Identities=28% Similarity=0.212 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhhcCCCccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHH
Q 005365 244 AERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEML 318 (700)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa 318 (700)
+++.-....-|.+...+-|+..+..-.- --+|+|++||| ||++-=|-++||+++++-+
T Consensus 8 ~~d~y~~f~~Lse~esp~dy~ii~~e~~----~S~v~ilapHG-------------G~IE~GvSELare~s~e~S 65 (208)
T COG4195 8 AEDEYSNFASLSENESPVDYGIIYTEKL----GSRVLILAPHG-------------GGIEGGVSELAREFSDEYS 65 (208)
T ss_pred ccccccCHHHHHhccCcccCCeEEeecc----CceEEEEeccC-------------CccCccHHHHHHHHHHHHH
Confidence 4444444555665544334443332211 13799999997 7888888888998877644
No 233
>PLN02534 UDP-glycosyltransferase
Probab=31.73 E-value=5.3e+02 Score=29.68 Aligned_cols=37 Identities=19% Similarity=0.504 Sum_probs=27.2
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEecc
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+|+++. ||+| |-..-++ +|++.|+.+|+.|| ++++.
T Consensus 9 ~Hvv~vP---fpaq----------GHi~P~l--------~LAk~La~~G~~vT----~v~t~ 45 (491)
T PLN02534 9 LHFVLIP---LMAQ----------GHMIPMI--------DMARLLAERGVIVS----LVTTP 45 (491)
T ss_pred CEEEEEC---CCCc----------chHHHHH--------HHHHHHHhCCCeEE----EEECC
Confidence 4788775 5543 6666677 67777899999999 87754
No 234
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=31.05 E-value=72 Score=29.80 Aligned_cols=38 Identities=13% Similarity=0.399 Sum_probs=24.1
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEe
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIIT 336 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT 336 (700)
|||++|+. . |...|.... |.+.+++.+.+.|++|+ ++-
T Consensus 1 Mkilii~g--S---------~r~~~~t~~-------l~~~~~~~l~~~g~e~~----~i~ 38 (152)
T PF03358_consen 1 MKILIING--S---------PRKNSNTRK-------LAEAVAEQLEEAGAEVE----VID 38 (152)
T ss_dssp -EEEEEES--S---------SSTTSHHHH-------HHHHHHHHHHHTTEEEE----EEE
T ss_pred CEEEEEEC--c---------CCCCCHHHH-------HHHHHHHHHHHcCCEEE----EEe
Confidence 89999963 2 323454333 33467777888899999 763
No 235
>CHL00194 ycf39 Ycf39; Provisional
Probab=30.54 E-value=46 Score=35.50 Aligned_cols=19 Identities=11% Similarity=0.331 Sum_probs=15.8
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
+++++|.++||+|. +++|.
T Consensus 15 ~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 15 QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred HHHHHHHHCCCeEE----EEEcC
Confidence 56677889999999 88876
No 236
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=30.44 E-value=3.5e+02 Score=25.65 Aligned_cols=106 Identities=16% Similarity=0.163 Sum_probs=57.9
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCC--CCCCCCCccceeEe
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLP--DAVGTTCGQRLEKV 354 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p--~~~~~~~~~~~e~i 354 (700)
.+|+++..+.-|.. .-. ..++.|.++||+|. =+-+... +..|..+-.++..+
T Consensus 17 K~IAvVG~S~~P~r--------------~sy--------~V~kyL~~~GY~Vi----PVNP~~~~~eiLG~k~y~sL~dI 70 (140)
T COG1832 17 KTIAVVGASDKPDR--------------PSY--------RVAKYLQQKGYRVI----PVNPKLAGEEILGEKVYPSLADI 70 (140)
T ss_pred ceEEEEecCCCCCc--------------cHH--------HHHHHHHHCCCEEE----eeCcccchHHhcCchhhhcHHhC
Confidence 58999987665431 112 56678899999987 5544222 22233333333333
Q ss_pred cCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEE
Q 005365 355 YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V 432 (700)
+. .+.++-+ |+. ..++..+.+...+. .+.+++......+--+...++..|+.+|
T Consensus 71 pe--~IDiVdv-FR~------------------~e~~~~i~~eal~~---~~kv~W~QlGi~n~ea~~~~~~aG~~vV 124 (140)
T COG1832 71 PE--PIDIVDV-FRR------------------SEAAPEVAREALEK---GAKVVWLQLGIRNEEAAEKARDAGLDVV 124 (140)
T ss_pred CC--CCcEEEE-ecC------------------hhhhHHHHHHHHhh---CCCeEEEecCcCCHHHHHHHHHhCcHHH
Confidence 32 2333332 111 12333444444443 5888888776666667777777776543
No 237
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=30.15 E-value=1.3e+02 Score=34.88 Aligned_cols=85 Identities=14% Similarity=0.183 Sum_probs=60.0
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCC-CCCCccHHHHHHHHcCCCEEEcCCCCccc---------------
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGPAE--------------- 649 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS-~~E~fGl~vlEAMA~GlPVVAT~~GG~~E--------------- 649 (700)
++.-|+=+| .++..|+...+.. +-|||=-- -+| |-+.+||+|.|+|-|-...-.+..
T Consensus 320 ~P~~V~NHG----~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~ 392 (559)
T PF15024_consen 320 VPSFVKNHG----ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLRE 392 (559)
T ss_pred cchhhhhcC----cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcce
Confidence 444455566 5667899999997 88888653 255 557899999999988765432211
Q ss_pred ----------ccccCCeEEEECCCCHHHHHHHHHHHHHh
Q 005365 650 ----------IIVNGKSGYHIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 650 ----------iI~dg~~G~lv~p~D~eaLAeaI~~ll~~ 678 (700)
.|. .-.-+.|+-+|.+++-++|.+++..
T Consensus 393 ~~SQhPY~e~~iG-~PhVytVd~~n~~~v~~Avk~il~~ 430 (559)
T PF15024_consen 393 WTSQHPYAEEFIG-EPHVYTVDINNSTEVEAAVKAILAT 430 (559)
T ss_pred eccCChHHHhhCC-CCeEEEEcCCCHHHHHHHHHHHHhc
Confidence 111 1245778999999999999999843
No 238
>COG1010 CobJ Precorrin-3B methylase [Coenzyme metabolism]
Probab=29.91 E-value=2.1e+02 Score=29.58 Aligned_cols=21 Identities=14% Similarity=0.387 Sum_probs=17.1
Q ss_pred HHHHHHHHCCCceeeccEEEeccCC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLLP 340 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~p 340 (700)
+.|-++++.|++|. +++...|
T Consensus 63 ~~AielA~~G~~Va----lVSsGDp 83 (249)
T COG1010 63 KEAIELAAEGRDVA----LVSSGDP 83 (249)
T ss_pred HHHHHHHhcCCeEE----EEeCCCc
Confidence 67788999999999 8876543
No 239
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=29.68 E-value=3e+02 Score=32.55 Aligned_cols=142 Identities=15% Similarity=0.069 Sum_probs=84.9
Q ss_pred hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 538 KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL-NGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 538 ~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L-~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
.|=-...++....++...|+..+++.--..-.+ ..++..+++.|+ +++|.|.. ....+|-.+-..- +||.
T Consensus 769 yKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge----~rf~ty~~~~Gl~p~riifs~----va~k~eHvrr~~L-aDv~ 839 (966)
T KOG4626|consen 769 YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE----QRFRTYAEQLGLEPDRIIFSP----VAAKEEHVRRGQL-ADVC 839 (966)
T ss_pred hcCCHHHHHHHHHHHHhCCcceeEEEeccccch----HHHHHHHHHhCCCccceeecc----ccchHHHHHhhhh-hhhc
Confidence 344445667777777777877766644322211 467888899998 57899987 3334555555554 7887
Q ss_pred EeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccc-----ccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 005365 617 VQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEII-----VNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISL 691 (700)
Q Consensus 617 V~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI-----~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~ 691 (700)
+=.-.+-|. .|-+|.+-+|+|+|+-...-.+.-| ..-..|-++. .+-++..+.-.++- .|.+..++++.
T Consensus 840 LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia-k~~eEY~~iaV~La----td~~~L~~lr~ 913 (966)
T KOG4626|consen 840 LDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA-KNREEYVQIAVRLA----TDKEYLKKLRA 913 (966)
T ss_pred ccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh-hhHHHHHHHHHHhh----cCHHHHHHHHH
Confidence 765444432 2456788899999985432222211 1112333333 25566655555554 78887777766
Q ss_pred HHH
Q 005365 692 GGL 694 (700)
Q Consensus 692 ~ar 694 (700)
.-+
T Consensus 914 ~l~ 916 (966)
T KOG4626|consen 914 KLR 916 (966)
T ss_pred HHH
Confidence 544
No 240
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=29.57 E-value=5.1e+02 Score=26.53 Aligned_cols=58 Identities=17% Similarity=0.147 Sum_probs=33.9
Q ss_pred CcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccc-cc-CCeEEEECCCCHHHHHHHHHHHH
Q 005365 613 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEII-VN-GKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 613 aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI-~d-g~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+++...|. ..+++-.-.-.|++.-+.||..--. .. +..-|-++|++-.+||.+|+--+
T Consensus 168 shlv~Vpp------g~~L~d~l~ssPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM 227 (259)
T KOG2884|consen 168 SHLVSVPP------GPLLSDALLSSPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM 227 (259)
T ss_pred ceEEEeCC------CccHHHHhhcCceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH
Confidence 44565662 2244445567899988644443322 11 12334567877778999998655
No 241
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=29.45 E-value=5.7e+02 Score=25.34 Aligned_cols=45 Identities=11% Similarity=0.024 Sum_probs=21.9
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCcccc
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTK 442 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~ 442 (700)
.+...+... +||++..-.+..-+-...+.. .... ++.+|...-.+
T Consensus 70 ~~~~~l~~~---~~D~iv~~~~~~il~~~~l~~-~~~~-~iNiHpslLP~ 114 (190)
T TIGR00639 70 AIIEELRAH---EVDLVVLAGFMRILGPTFLSR-FAGR-ILNIHPSLLPA 114 (190)
T ss_pred HHHHHHHhc---CCCEEEEeCcchhCCHHHHhh-ccCC-EEEEeCCcccC
Confidence 344455554 899988844333222222222 1222 56677654333
No 242
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=29.06 E-value=5.3e+02 Score=25.51 Aligned_cols=30 Identities=33% Similarity=0.507 Sum_probs=23.3
Q ss_pred EEEEcCCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 408 LIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 408 lIh~h~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
++++ .+.|++.|..++.+.++|.|...=++
T Consensus 62 ~liG-SSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 62 VLIG-SSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred EEEE-EChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 4444 68889999999999999998765443
No 243
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=28.92 E-value=5.3e+02 Score=29.37 Aligned_cols=112 Identities=17% Similarity=0.149 Sum_probs=53.3
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHH-CCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCccccccccc
Q 005365 300 GGQVVYILDQVRALEDEMLLRIKQ-QGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWI 378 (700)
Q Consensus 300 GG~~vyvld~araL~~eLa~~L~~-~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~l 378 (700)
-|-..-.+ +|++.|+. .|+.|+ ++|....... .. .......++++++.+|-+-..+...
T Consensus 14 qGHi~P~l--------~La~~La~~~G~~vT----~v~t~~~~~~-~~----~~~~~~~~~i~~~~i~dglp~g~~~--- 73 (455)
T PLN02152 14 QGHVNPSL--------RFARRLIKTTGTRVT----FATCLSVIHR-SM----IPNHNNVENLSFLTFSDGFDDGVIS--- 73 (455)
T ss_pred cccHHHHH--------HHHHHHhhCCCcEEE----EEeccchhhh-hh----hccCCCCCCEEEEEcCCCCCCcccc---
Confidence 47677777 67777785 699999 8776421110 00 0000111246666666321111100
Q ss_pred ccccchhhHHHH----HHHHHHHHHHHc-CCCC-eEEEEcCCCchHHHHHHHHhcCCcEEE
Q 005365 379 SRFEVWPYLETY----TEDVAVEIAKEL-QGKP-DLIIGNYSDGNIVASLLAHKLGVTQCT 433 (700)
Q Consensus 379 sr~~i~~~l~~f----~~~~~~~l~~~~-~~~p-DlIh~h~~~~~lva~lla~~~giP~V~ 433 (700)
+......++... ...+...+.+.. .++| +.|++.... .++.-+|+++|||.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~--~wa~dvA~~lgIP~~~ 132 (455)
T PLN02152 74 NTDDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILP--NWAPKVARRFHLPSVL 132 (455)
T ss_pred ccccHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCcc--HhHHHHHHHhCCCEEE
Confidence 001122222222 122233333321 2234 778774332 3456788899999754
No 244
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=28.25 E-value=3.2e+02 Score=27.35 Aligned_cols=18 Identities=17% Similarity=0.268 Sum_probs=11.2
Q ss_pred HHHHHHHHHcCCCCeEEEEcC
Q 005365 393 DVAVEIAKELQGKPDLIIGNY 413 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~ 413 (700)
.+...++.. +||+|.+..
T Consensus 71 ~~~~~l~~~---~~D~iv~~~ 88 (200)
T PRK05647 71 ALVEALDAY---QPDLVVLAG 88 (200)
T ss_pred HHHHHHHHh---CcCEEEhHH
Confidence 344445444 899988843
No 245
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=27.88 E-value=1.1e+02 Score=29.67 Aligned_cols=37 Identities=16% Similarity=0.355 Sum_probs=25.8
Q ss_pred HHHHHccCcEEEeCCC----CCCcc--HHHHHHHHcCCCEEEc
Q 005365 606 YRYICDTKGAFVQPAL----YEAFG--LTVVEAMTCGLPTFAT 642 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~----~E~fG--l~vlEAMA~GlPVVAT 642 (700)
.+-+.+.+|++|.--. .|+-| -.+.+|++.|+||+++
T Consensus 87 ~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 87 RRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred HHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEE
Confidence 3444445787777643 24444 4689999999999997
No 246
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=27.79 E-value=9.1e+02 Score=27.13 Aligned_cols=47 Identities=13% Similarity=-0.002 Sum_probs=32.6
Q ss_pred hhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCccccc
Q 005365 602 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEII 651 (700)
Q Consensus 602 ~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI 651 (700)
.+++...+.+ +|+.+..+-...+= +-..|.-+.|.+.-|.+-|+++=
T Consensus 233 ~~~l~~~l~~-aDiVI~aT~a~~~v--i~~~~~~~~~~~~iDLavPRdid 279 (414)
T PRK13940 233 LSELPQLIKK-ADIIIAAVNVLEYI--VTCKYVGDKPRVFIDISIPQALD 279 (414)
T ss_pred HHHHHHHhcc-CCEEEECcCCCCee--ECHHHhCCCCeEEEEeCCCCCCC
Confidence 4677888887 99999876432221 11334468899999998888874
No 247
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=27.74 E-value=7.8e+02 Score=27.75 Aligned_cols=89 Identities=11% Similarity=0.031 Sum_probs=51.2
Q ss_pred cCChhHHHHHHHccCcEEEeCCC--CCCccHH-HHHHHHcCCCEEEcCCCCcccccccC---CeEEEECCCCHHHHHHHH
Q 005365 599 RVRNGELYRYICDTKGAFVQPAL--YEAFGLT-VVEAMTCGLPTFATCKGGPAEIIVNG---KSGYHIDPYHGEQAAEIL 672 (700)
Q Consensus 599 ~v~~~el~~~la~~aDvfV~PS~--~E~fGl~-vlEAMA~GlPVVAT~~GG~~EiI~dg---~~G~lv~p~D~eaLAeaI 672 (700)
.++.+++..++.. +|+++..+- .--.+.. +-+|+.--...+.-|.+-|+++=.+- .+-++++ .+++....
T Consensus 226 ~~~l~el~~~l~~-~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdie~~v~~l~~v~l~~---iDDL~~iv 301 (414)
T COG0373 226 AVALEELLEALAE-ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDVEPEVGELPNVFLYT---IDDLEEIV 301 (414)
T ss_pred eecHHHHHHhhhh-CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCCCccccCcCCeEEEe---hhhHHHHH
Confidence 4456899999998 999887632 2233443 34455555556888998888875321 1235554 44444333
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 673 VDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 673 ~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
. .|-..|++..+.+...+.
T Consensus 302 ~-------~n~~~R~~~~~~ae~iIe 320 (414)
T COG0373 302 E-------ENLEARKEEAAKAEAIIE 320 (414)
T ss_pred H-------HhHHHHHHHHHHHHHHHH
Confidence 2 344555555555554443
No 248
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=27.67 E-value=3e+02 Score=28.17 Aligned_cols=49 Identities=24% Similarity=0.264 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCeEEEE---cCCCch-HHHHHHHHhcCCcEEEEec
Q 005365 386 YLETYTEDVAVEIAKELQGKPDLIIG---NYSDGN-IVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 386 ~l~~f~~~~~~~l~~~~~~~pDlIh~---h~~~~~-lva~lla~~~giP~V~t~H 436 (700)
|.+.+.....+.+-..+. --+|++ ||..+- .-....++.+.+|+|.+.-
T Consensus 56 yres~~ks~~rlldSalk--n~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALK--NYLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhc--ceEEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 566677777776665543 225555 443332 1334567778888887543
No 249
>TIGR00557 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase. This model represents PdxA, an NAD+-dependent 4-hydroxythreonine 4-phosphate dehydrogenase (EC 1.1.1.262) active in pyridoxal phosphate biosynthesis.
Probab=27.41 E-value=2.7e+02 Score=30.25 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=23.7
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-------cCCcEEEEe
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHK-------LGVTQCTIA 435 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~-------~giP~V~t~ 435 (700)
+++|.|.+-|.+-+++...+... +|.|+|.|.
T Consensus 251 ~~~D~vvaMYHDQGliP~K~l~F~~gVNvTlGLPiiRTS 289 (320)
T TIGR00557 251 AKYDAVLAMYHDQGLIPLKYLGFDEGVNVTLGLPFIRTS 289 (320)
T ss_pred cCCCEEEECcccccchhheecccCcceEEecCCCeeEeC
Confidence 37999999999988877655543 367887763
No 250
>PRK09739 hypothetical protein; Provisional
Probab=27.39 E-value=92 Score=30.89 Aligned_cols=36 Identities=8% Similarity=0.235 Sum_probs=24.7
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
+|||++|..|.. .+|. .++|.+.+.+.+.+.|++|+
T Consensus 3 mmkiliI~~sp~-----------~~s~-------s~~l~~~~~~~~~~~g~~v~ 38 (199)
T PRK09739 3 SMRIYLVWAHPR-----------HDSL-------TAKVAEAIHQRAQERGHQVE 38 (199)
T ss_pred CceEEEEEcCCC-----------CCCc-------HHHHHHHHHHHHHHCCCEEE
Confidence 489999986632 2343 33444567778899999998
No 251
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=27.04 E-value=3.2e+02 Score=28.29 Aligned_cols=34 Identities=15% Similarity=0.080 Sum_probs=20.5
Q ss_pred CCCeEEEE-cCCCch-HHHHHHHHhcCCcEEEEecC
Q 005365 404 GKPDLIIG-NYSDGN-IVASLLAHKLGVTQCTIAHA 437 (700)
Q Consensus 404 ~~pDlIh~-h~~~~~-lva~lla~~~giP~V~t~H~ 437 (700)
..+|.|.. ++.... -+.-.+-+.+|+|++.....
T Consensus 180 ~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNqa 215 (239)
T TIGR02990 180 PDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQA 215 (239)
T ss_pred CCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHHH
Confidence 36787666 333322 24455666789999875543
No 252
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=26.75 E-value=6.1e+02 Score=26.74 Aligned_cols=108 Identities=16% Similarity=0.138 Sum_probs=56.1
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC--CCCCCCCCccc--eeEecCccceEEEEecCCCccccccc
Q 005365 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL--PDAVGTTCGQR--LEKVYGTKYSDILRVPFRTEKGVVRK 376 (700)
Q Consensus 301 G~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~--p~~~~~~~~~~--~e~i~~~~~v~I~rvp~~~~~~~~~~ 376 (700)
|-...+- .|.+.+.++|+.|- |++-.+ |-.-|.....+ .......+++-|-.++.+...|
T Consensus 41 GKSTli~--------~l~~~~~~~g~~Va----VlAVDPSSp~tGGAlLGDRiRM~~~~~d~~vfIRS~atRG~lG---- 104 (266)
T PF03308_consen 41 GKSTLID--------ALIRELRERGKRVA----VLAVDPSSPFTGGALLGDRIRMQELSRDPGVFIRSMATRGSLG---- 104 (266)
T ss_dssp SHHHHHH--------HHHHHHHHTT--EE----EEEE-GGGGCC---SS--GGGCHHHHTSTTEEEEEE---SSHH----
T ss_pred cHHHHHH--------HHHHHHhhcCCceE----EEEECCCCCCCCCcccccHHHhcCcCCCCCEEEeecCcCCCCC----
Confidence 5566666 67777899999999 776332 22223322222 2333444577777777766532
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 005365 377 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 377 ~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H 436 (700)
-+.....++...+... .+|+|+.-+...+..-.-++....+.+++..-
T Consensus 105 ---------Gls~~t~~~v~ll~aa---G~D~IiiETVGvGQsE~~I~~~aD~~v~v~~P 152 (266)
T PF03308_consen 105 ---------GLSRATRDAVRLLDAA---GFDVIIIETVGVGQSEVDIADMADTVVLVLVP 152 (266)
T ss_dssp ---------HHHHHHHHHHHHHHHT---T-SEEEEEEESSSTHHHHHHTTSSEEEEEEES
T ss_pred ---------CccHhHHHHHHHHHHc---CCCEEEEeCCCCCccHHHHHHhcCeEEEEecC
Confidence 2333344555555544 69999997766555555566655655555443
No 253
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=26.44 E-value=8.8e+02 Score=26.53 Aligned_cols=125 Identities=6% Similarity=-0.069 Sum_probs=68.1
Q ss_pred CCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH----HHHHccCcEEEeCC--CCCCccHHH
Q 005365 556 VENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY----RYICDTKGAFVQPA--LYEAFGLTV 629 (700)
Q Consensus 556 ~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~----~~la~~aDvfV~PS--~~E~fGl~v 629 (700)
.+.++.++|.|+- -+...+...+.|. .+|.+........+.++++ .+... +|+.+..| ..-+.+...
T Consensus 173 ~~k~vLvIGaGem-----~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Tas~~p~i~ 245 (338)
T PRK00676 173 KKASLLFIGYSEI-----NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESAYAFPHLS 245 (338)
T ss_pred cCCEEEEEcccHH-----HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCCCCCceee
Confidence 4567888888732 2233333444555 4588887665555666665 66665 99999853 233445555
Q ss_pred HHHHHcCCCEEEcCCCCccccc--ccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 630 VEAMTCGLPTFATCKGGPAEII--VNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 630 lEAMA~GlPVVAT~~GG~~EiI--~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
.|.+..-.+-+.-|..-|+++= ....+-.++ |.+++.+.+.+ |-..|++....+...+
T Consensus 246 ~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~~-------n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 246 WESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQK-------HLQCRKEVNNKHKLSL 305 (338)
T ss_pred HHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 5555432224566777777763 112233354 55665554443 3344444444444444
No 254
>PLN03004 UDP-glycosyltransferase
Probab=26.43 E-value=7.1e+02 Score=28.34 Aligned_cols=19 Identities=21% Similarity=0.364 Sum_probs=15.4
Q ss_pred HHHhhCCEEEecCHHHHHh
Q 005365 468 IAMNHTDFIITSTFQEIAG 486 (700)
Q Consensus 468 ~al~~AD~IIt~S~~~~~~ 486 (700)
..+..+|.|+++|..+.+.
T Consensus 204 ~~~~~~~~vl~NTf~eLE~ 222 (451)
T PLN03004 204 KQLSKSSGIIINTFDALEN 222 (451)
T ss_pred HhhcccCeeeeeeHHHhHH
Confidence 4567899999999988764
No 255
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=26.34 E-value=1.2e+02 Score=27.61 Aligned_cols=43 Identities=19% Similarity=0.132 Sum_probs=29.5
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
|+|||+.++... +|-...|+. +++| .++-+++||++. |=|+..
T Consensus 1 ~~mkivaVtacp------------~GiAht~lA--AeaL----~kAA~~~G~~i~----VE~qg~ 43 (114)
T PRK10427 1 MMAYLVAVTACV------------SGVAHTYMA--AERL----EKLCQLEKWGVK----IETQGA 43 (114)
T ss_pred CCceEEEEeeCC------------CcHHHHHHH--HHHH----HHHHHHCCCeEE----EEecCC
Confidence 678998886432 255666655 5554 456788999999 877653
No 256
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=26.17 E-value=4.7e+02 Score=27.75 Aligned_cols=17 Identities=18% Similarity=0.479 Sum_probs=14.8
Q ss_pred HHHHHHHHCCCceeeccEEEe
Q 005365 316 EMLLRIKQQGLDITPQILIIT 336 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT 336 (700)
+|++.|+++|++|. ++.
T Consensus 15 ~~~~~l~~~g~~v~----~~g 31 (287)
T TIGR02853 15 ELIRKLEELDAKIS----LIG 31 (287)
T ss_pred HHHHHHHHCCCEEE----EEe
Confidence 58899999999998 764
No 257
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=25.74 E-value=71 Score=32.39 Aligned_cols=22 Identities=23% Similarity=0.398 Sum_probs=17.5
Q ss_pred HHHHHHHHCCCceeeccEEEeccCCC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLLPD 341 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~p~ 341 (700)
-|+++|++.||+|. |-++..++
T Consensus 15 alA~~~a~ag~eV~----igs~r~~~ 36 (211)
T COG2085 15 ALALRLAKAGHEVI----IGSSRGPK 36 (211)
T ss_pred HHHHHHHhCCCeEE----EecCCChh
Confidence 57888999999998 77666544
No 258
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=25.53 E-value=4.1e+02 Score=25.03 Aligned_cols=64 Identities=11% Similarity=0.058 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccCcCChhH--------------------------HHHHHHccCcEEEeCCCCCCc
Q 005365 572 AEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE--------------------------LYRYICDTKGAFVQPALYEAF 625 (700)
Q Consensus 572 ~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~e--------------------------l~~~la~~aDvfV~PS~~E~f 625 (700)
..++++.+-+++.+|+ |.|.+.++|.-..++ -...+.+ ||+.|.- |
T Consensus 12 dWRe~I~~ga~~~~L~--v~F~~pvtdH~aSD~~G~~iLG~e~~~fw~D~k~a~iNaiRT~~li~~-aDvvVvr-----F 83 (144)
T TIGR03646 12 DWREEIKEGAKSKNLP--IVFSGPVTDHEASDNIGEDILGKQPSNFWRDDAAASINNIRTRKLIEK-ADVVIAL-----F 83 (144)
T ss_pred hHHHHHHHHHHHcCCC--eEEecCCCCCcchhhhhHHHhCCCCccccccccccchhhHHHHHHHhh-CCEEEEE-----e
Confidence 3456666666666664 666665554322222 2234554 8887774 3
Q ss_pred cHH------H---HHHHHcCCCEEEcC
Q 005365 626 GLT------V---VEAMTCGLPTFATC 643 (700)
Q Consensus 626 Gl~------v---lEAMA~GlPVVAT~ 643 (700)
|-+ . -=|.|.|+|.|.-.
T Consensus 84 GekYKQWNaAfDAg~aaAlgKplI~lh 110 (144)
T TIGR03646 84 GEKYKQWNAAFDAGYAAALGKPLIILR 110 (144)
T ss_pred chHHHHHHHHhhHHHHHHcCCCeEEec
Confidence 321 2 23578999999853
No 259
>PRK03371 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 2; Provisional
Probab=25.51 E-value=3.1e+02 Score=29.84 Aligned_cols=32 Identities=19% Similarity=0.290 Sum_probs=23.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-------cCCcEEEEe
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHK-------LGVTQCTIA 435 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~-------~giP~V~t~ 435 (700)
+++|.|.+-|.+-++.+..+... +|.|++.|.
T Consensus 257 ~~~D~vvaMYHDQGliP~K~l~F~~gVNvTlGLP~iRTS 295 (326)
T PRK03371 257 GQYDMVVAMYHDQGHIPLKLLGFYDGVNITAGLPFIRTS 295 (326)
T ss_pred cCCCEEEEccccccchhheecccccceEEecCCCeeEec
Confidence 37999999999988877765543 367887763
No 260
>PRK00232 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed
Probab=25.31 E-value=3.3e+02 Score=29.73 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=23.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-------cCCcEEEEe
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHK-------LGVTQCTIA 435 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~-------~giP~V~t~ 435 (700)
+++|.|.+-|.+-+++++.+... +|.|++.|.
T Consensus 258 ~~~D~vvaMYHDQGliP~K~l~F~~gVNvTlGLPiiRTS 296 (332)
T PRK00232 258 GDADAVLAMYHDQGLPVLKYLGFGRGVNITLGLPFIRTS 296 (332)
T ss_pred CCCCEEEECcccccchhheecccCcceEEecCCCeeEeC
Confidence 47999999999988877655543 367777763
No 261
>PLN02778 3,5-epimerase/4-reductase
Probab=24.46 E-value=76 Score=33.64 Aligned_cols=31 Identities=19% Similarity=0.389 Sum_probs=24.0
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
++.|||++....|+-| . +|++.|.++||+|+
T Consensus 7 ~~~~kiLVtG~tGfiG-----------~--------------~l~~~L~~~g~~V~ 37 (298)
T PLN02778 7 SATLKFLIYGKTGWIG-----------G--------------LLGKLCQEQGIDFH 37 (298)
T ss_pred CCCCeEEEECCCCHHH-----------H--------------HHHHHHHhCCCEEE
Confidence 5668999998777632 2 67788899999987
No 262
>PRK07206 hypothetical protein; Provisional
Probab=24.41 E-value=2.4e+02 Score=31.32 Aligned_cols=27 Identities=30% Similarity=0.294 Sum_probs=16.8
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcE
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQ 431 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~ 431 (700)
++|.|+...-.....+..++..+++|+
T Consensus 70 ~~d~vi~~~e~~~~~~a~l~~~l~l~~ 96 (416)
T PRK07206 70 GPEAIIAGAESGVELADRLAEILTPQY 96 (416)
T ss_pred CCCEEEECCCccHHHHHHHHHhcCCCc
Confidence 789888744333345555666777764
No 263
>PF06377 Adipokin_hormo: Adipokinetic hormone; InterPro: IPR010475 This family consists of several insect adipokinetic hormone as well as the related crustacean red pigment concentrating hormone (RPCH) []. Flight activity of insects comprises one of the most intense biochemical processes known in nature, and therefore provides an attractive model system to study the hormonal regulation of metabolism during physical exercise. In long-distance flying insects, such as the migratory locust, both carbohydrate and lipid reserves are utilised as fuels for sustained flight activity. The mobilisation of these energy stores in Locusta migratoria (Migratory locust) is mediated by three structurally related adipokinetic hormones (AKHs), which are all capable of stimulating the release of both carbohydrates and lipids from the fat body [].; GO: 0005179 hormone activity
Probab=24.00 E-value=26 Score=26.83 Aligned_cols=14 Identities=29% Similarity=0.826 Sum_probs=11.1
Q ss_pred cCCccccCccHHHH
Q 005365 234 IGLERGWGDTAERA 247 (700)
Q Consensus 234 ~~~~~~~g~~~~~~ 247 (700)
|.|-||||.-++..
T Consensus 2 LnFSp~WGKRs~~~ 15 (48)
T PF06377_consen 2 LNFSPGWGKRSAGA 15 (48)
T ss_pred cccCCCcccccccC
Confidence 67999999876653
No 264
>PRK05866 short chain dehydrogenase; Provisional
Probab=23.97 E-value=1.4e+02 Score=31.36 Aligned_cols=19 Identities=11% Similarity=0.253 Sum_probs=14.9
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++.|+++|++|. ++.+.
T Consensus 55 ~la~~La~~G~~Vi----~~~R~ 73 (293)
T PRK05866 55 AAAEQFARRGATVV----AVARR 73 (293)
T ss_pred HHHHHHHHCCCEEE----EEECC
Confidence 56677899999987 77664
No 265
>TIGR01319 glmL_fam conserved hypothetical protein. This small family includes, so far, an uncharacterized protein from E. coli O157:H7 and GlmL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family (pfam01968).
Probab=23.74 E-value=2.8e+02 Score=31.63 Aligned_cols=61 Identities=11% Similarity=0.032 Sum_probs=40.4
Q ss_pred HhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEE
Q 005365 551 LLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAF 616 (700)
Q Consensus 551 Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvf 616 (700)
+....||. +++.|+-|+.+.+..-...+++.++++.-.|.+.| |..-.+++...+.. +++.
T Consensus 116 I~~~~PDI-ILLaGGtDGG~~e~~l~NA~~La~~~~~~pIIyAG---N~~a~~~V~~il~~-~~~~ 176 (463)
T TIGR01319 116 IEESNLDI-ILFAGGTDGGEEECGIHNAKMLAEHGLDCAIIVAG---NKDIQDEVQEIFDH-ADIF 176 (463)
T ss_pred HhhcCCCE-EEEeCCcCCCchHHHHHHHHHHHhcCCCCcEEEeC---CHHHHHHHHHHHhc-CCce
Confidence 33334443 55667777777666667777777888877788888 34445777777775 6665
No 266
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=23.23 E-value=77 Score=33.89 Aligned_cols=19 Identities=16% Similarity=0.238 Sum_probs=15.6
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
-++..|++.||+|+ ++++.
T Consensus 19 ~lA~~L~~~g~~V~----~~~r~ 37 (313)
T PRK06249 19 FYGAMLARAGFDVH----FLLRS 37 (313)
T ss_pred HHHHHHHHCCCeEE----EEEeC
Confidence 45667899999999 99875
No 267
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.16 E-value=2.9e+02 Score=28.73 Aligned_cols=89 Identities=16% Similarity=0.112 Sum_probs=58.1
Q ss_pred HHHHHHccCcEEEeCC-CCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCH
Q 005365 605 LYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADP 683 (700)
Q Consensus 605 l~~~la~~aDvfV~PS-~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp 683 (700)
-..-+++ ||++|.-- -.|+|=-.+++.+ .+.++++...++..+- .+..--+..+|.+...+++.|.+.|. ..||
T Consensus 46 d~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L~--~~dP 120 (264)
T cd01020 46 DAAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADALV--KADP 120 (264)
T ss_pred HHHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHHH--HhCc
Confidence 3445665 88888864 3576656666655 4566666544432110 01133467788899999999999884 4688
Q ss_pred HHHHHHHHHHHHHHH
Q 005365 684 SYWDKISLGGLKRIE 698 (700)
Q Consensus 684 ~~~~~ms~~ar~ra~ 698 (700)
+......+|+.++..
T Consensus 121 ~~~~~y~~N~~~~~~ 135 (264)
T cd01020 121 DNKKYYQANAKKFVA 135 (264)
T ss_pred ccHHHHHHHHHHHHH
Confidence 888888888877654
No 268
>PF05908 DUF867: Protein of unknown function (DUF867); InterPro: IPR008585 This family consists of a number of bacterial and phage proteins with no known function and which are found in Bacillus species and the Lambda-like viruses.; PDB: 3A9L_A.
Probab=23.14 E-value=61 Score=32.47 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=21.7
Q ss_pred EEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHH-HCCCcee
Q 005365 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIK-QQGLDIT 329 (700)
Q Consensus 278 kI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~-~~GheV~ 329 (700)
+|++++||| ||+|.-+-++|+ +++ ...+...
T Consensus 28 ~vlvlApHG-------------GgIE~gTsElA~--------~iA~~~~~s~y 59 (194)
T PF05908_consen 28 DVLVLAPHG-------------GGIEPGTSELAE--------AIADGGDYSYY 59 (194)
T ss_dssp SEEEEEEEE-------------ETTSTTHHHHHH--------HHHHHH--EEE
T ss_pred cEEEEeccc-------------CccCcCHHHHHH--------HHhccCCCCEE
Confidence 689999997 899999995444 556 4455555
No 269
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=22.94 E-value=5.5e+02 Score=26.67 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=23.2
Q ss_pred CcEEEeC-CCCCCccHHHHHHHHcCCCEEEcCCCCc
Q 005365 613 KGAFVQP-ALYEAFGLTVVEAMTCGLPTFATCKGGP 647 (700)
Q Consensus 613 aDvfV~P-S~~E~fGl~vlEAMA~GlPVVAT~~GG~ 647 (700)
+|++|.= |-..++.-++--|..+|+|||.-...-.
T Consensus 195 i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~ 230 (249)
T PF02571_consen 195 IDVLVTKESGGSGFDEKIEAARELGIPVIVIKRPPE 230 (249)
T ss_pred CCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCC
Confidence 5666654 2223667778888899999988655433
No 270
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=22.77 E-value=1.4e+02 Score=30.71 Aligned_cols=41 Identities=22% Similarity=0.499 Sum_probs=25.7
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCC
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPD 341 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~ 341 (700)
.++|++|.+|--- .++| .|| ....++++|++|. ++|-...+
T Consensus 10 ~~~vL~v~aHPDD---e~~g---~gg---------------tla~~~~~G~~V~----v~~lT~Ge 50 (237)
T COG2120 10 PLRVLVVFAHPDD---EEIG---CGG---------------TLAKLAARGVEVT----VVCLTLGE 50 (237)
T ss_pred CCcEEEEecCCcc---hhhc---cHH---------------HHHHHHHCCCeEE----EEEccCCc
Confidence 4899999998531 1232 233 2234699999999 66654433
No 271
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=22.77 E-value=9e+02 Score=25.37 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=22.8
Q ss_pred CCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 404 GKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 404 ~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
.+||+|.+ |. +.+...|.+-+...|+|-+....
T Consensus 86 ~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~ 129 (261)
T PRK13931 86 APPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ 129 (261)
T ss_pred CCCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence 48999998 22 22344566677788999887654
No 272
>cd07373 2A5CPDO_A The alpha subunit of the Class III extradiol dioxygenase, 2-amino-5-chlorophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol. 2-amino-5-chlorophenol 1,6-dioxygenase (2A5CPDO) catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol, which is an intermediate during p-chloronitrobenzene degradation. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. The active enzyme is probably a heterotetramer, composed of two alpha and two beta subunits. The alpha and beta subunits share significant sequence similarity and may have evolved by gene duplication. This model describes the alpha subunit, which does not contain a potential metal binding site and may not possess catalytic activity.
Probab=22.75 E-value=2.2e+02 Score=29.87 Aligned_cols=72 Identities=15% Similarity=0.167 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhhcCCCccchhhhhcCCCcceEEEEEcccccc-ccCCcCCCC------------CcCcchhhhHHHH
Q 005365 244 AERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYF-AQDDVLGYP------------DTGGQVVYILDQV 310 (700)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~mkI~iis~h~~~-~~~~~lG~p------------~~GG~~vyvld~a 310 (700)
+.++.+.|+.+.+.+.+..|. -|+++|+|..- .+...++.+ +.||.. +-..-.
T Consensus 24 ~~~~~~a~~~lg~~l~~~~Pd-------------~IvviS~Hw~~~~~~~~v~~~~~~g~~~~~~~~df~g~p-~~~~g~ 89 (271)
T cd07373 24 WGQFAAATRQAGKALAASRPD-------------VVLVYSTQWFAVLDQQWLTRPRSEGVHVDENWHEFGELP-YDIRSD 89 (271)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-------------EEEEECCCCcccccceeEeeccccccccccChhHhcCcc-cccCCC
Confidence 445666677676655433333 58999999652 011223321 233322 123336
Q ss_pred HHHHHHHHHHHHHCCCcee
Q 005365 311 RALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 311 raL~~eLa~~L~~~GheV~ 329 (700)
..|.+++++.+.++|.+|.
T Consensus 90 ~eLA~~i~~~~~~~gi~~~ 108 (271)
T cd07373 90 TALAEACVTACPEHGVHAR 108 (271)
T ss_pred HHHHHHHHHHHHHCCCcEE
Confidence 7777888999999999886
No 273
>PRK03743 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated
Probab=22.71 E-value=3.7e+02 Score=29.36 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=23.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHHh-------cCCcEEEEe
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHK-------LGVTQCTIA 435 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~-------~giP~V~t~ 435 (700)
+++|.|.+-|.+-++....+... +|.|+|-|.
T Consensus 258 ~~~D~vvaMYHDQGliP~K~l~F~~gVNvTlGLP~iRTS 296 (332)
T PRK03743 258 GRYDAVLSLYHDQGHIATKTLDFERTIAITNGLPFLRTS 296 (332)
T ss_pred cCCCEEEEcccccCChhheecccCCceEEecCCCeeEeC
Confidence 37999999999988877655543 367887763
No 274
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=22.70 E-value=2.3e+02 Score=31.20 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=11.8
Q ss_pred HHHHHCCCceeeccEEEecc
Q 005365 319 LRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 319 ~~L~~~GheV~~~i~VvT~~ 338 (700)
.-|++|||+|. =++-.
T Consensus 21 ~lLk~QGyeVi----Gl~m~ 36 (356)
T COG0482 21 YLLKEQGYEVI----GLFMK 36 (356)
T ss_pred HHHHHcCCeEE----EEEEE
Confidence 35899999998 55544
No 275
>PF02585 PIG-L: GlcNAc-PI de-N-acetylase; InterPro: IPR003737 A number of the members of this family have been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, (3.5.1.89 from EC) that catalyses the second step in glycosylphosphatidylinositol (GPI) biosynthesis [, ]. The family also includes a number of thiol biosynthesis proteins. ; PDB: 2XAD_C 2X9L_A 3DFK_A 3DFM_A 3DFF_A 2IXD_A 1UAN_A 1Q74_B 1Q7T_B 3DFI_A.
Probab=22.35 E-value=94 Score=28.23 Aligned_cols=26 Identities=23% Similarity=0.344 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEcCCCc
Q 005365 388 ETYTEDVAVEIAKELQGKPDLIIGNYSDG 416 (700)
Q Consensus 388 ~~f~~~~~~~l~~~~~~~pDlIh~h~~~~ 416 (700)
......+.+.+.+. +||+|+.+...+
T Consensus 86 ~~~~~~l~~~i~~~---~p~~V~t~~~~~ 111 (128)
T PF02585_consen 86 EELVRDLEDLIREF---RPDVVFTPDPDD 111 (128)
T ss_dssp HHHHHHHHHHHHHH----ESEEEEE-STT
T ss_pred HHHHHHHHHHHHHc---CCCEEEECCCCC
Confidence 44555566666666 899999976444
No 276
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=22.14 E-value=1.2e+02 Score=31.13 Aligned_cols=19 Identities=16% Similarity=0.233 Sum_probs=15.6
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.|+++|.++|++|+ ++++.
T Consensus 31 aLA~~L~~~G~~V~----li~r~ 49 (229)
T PRK06732 31 IIAETFLAAGHEVT----LVTTK 49 (229)
T ss_pred HHHHHHHhCCCEEE----EEECc
Confidence 67788899999999 87653
No 277
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=22.05 E-value=2.2e+02 Score=29.95 Aligned_cols=34 Identities=35% Similarity=0.440 Sum_probs=27.6
Q ss_pred CCeEEEE----cCCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 405 KPDLIIG----NYSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 405 ~pDlIh~----h~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
.+|+|.+ ...+.+.++..++..+|.|+++.+-..
T Consensus 111 ~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~~i 148 (260)
T COG2086 111 GPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVSKI 148 (260)
T ss_pred CCCEEEEecccccCCccchHHHHHHHhCCceeeeEEEE
Confidence 7999988 236677899999999999999866544
No 278
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=21.92 E-value=1.4e+02 Score=31.13 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
+-||+++.-.+...-.|..-|+++|||+|..+.+-
T Consensus 155 ~~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn 189 (252)
T COG0052 155 GLPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTN 189 (252)
T ss_pred CCCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCC
Confidence 45999999888888889999999999999987753
No 279
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=21.89 E-value=4.1e+02 Score=25.81 Aligned_cols=66 Identities=24% Similarity=0.362 Sum_probs=41.3
Q ss_pred chHHHHHHhhcCCccc--cCc-cHHHHHHHHHHHHHhhcCCCccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcC
Q 005365 224 FSELALRFQEIGLERG--WGD-TAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG 300 (700)
Q Consensus 224 ~~~~~~~~~~~~~~~~--~g~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~G 300 (700)
+..|...|.++||+|- =|+ ..+=+.+.|.++ .+|. +. -++++|..+-|.
T Consensus 68 ~~~l~~~l~~~Gf~pv~~kG~~Dv~laIDame~~----~~~~----------iD---~~vLvSgD~DF~----------- 119 (160)
T TIGR00288 68 SDKLIEAVVNQGFEPIIVAGDVDVRMAVEAMELI----YNPN----------ID---AVALVTRDADFL----------- 119 (160)
T ss_pred cHHHHHHHHHCCceEEEecCcccHHHHHHHHHHh----ccCC----------CC---EEEEEeccHhHH-----------
Confidence 4567889999999973 221 122222222222 1222 22 578998777654
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEe
Q 005365 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIIT 336 (700)
Q Consensus 301 G~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT 336 (700)
.|++.|+++|.+|. +++
T Consensus 120 ---------------~Lv~~lre~G~~V~----v~g 136 (160)
T TIGR00288 120 ---------------PVINKAKENGKETI----VIG 136 (160)
T ss_pred ---------------HHHHHHHHCCCEEE----EEe
Confidence 57788999999999 876
No 280
>PRK06849 hypothetical protein; Provisional
Probab=21.68 E-value=2.2e+02 Score=31.39 Aligned_cols=19 Identities=16% Similarity=0.281 Sum_probs=14.5
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++.|.++||+|. ++...
T Consensus 19 ~iar~l~~~G~~Vi----~~d~~ 37 (389)
T PRK06849 19 ELARLFHNAGHTVI----LADSL 37 (389)
T ss_pred HHHHHHHHCCCEEE----EEeCC
Confidence 66777899999998 66543
No 281
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=21.56 E-value=1.1e+02 Score=32.17 Aligned_cols=45 Identities=18% Similarity=0.286 Sum_probs=34.1
Q ss_pred cccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 649 EIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 649 EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
++.-..-.|+.++++-+++..+++.+.+++..+||+..+.+.+.+
T Consensus 199 d~~~~~~~g~~~p~gtp~~~~~~l~~a~~~~~~~pe~~~~~~~~g 243 (274)
T PF03401_consen 199 DIVFGSWRGLFAPKGTPDEIVDKLADAIKKALEDPEFQEFLEKMG 243 (274)
T ss_dssp TG--EEEEEEEEETTS-HHHHHHHHHHHHHHHT-HHHHHHHHHHT
T ss_pred ceeeeeeeeeecCCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHCC
Confidence 333344578999999999999999999999999999988777654
No 282
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=21.53 E-value=8.2e+02 Score=25.72 Aligned_cols=18 Identities=22% Similarity=0.436 Sum_probs=13.1
Q ss_pred HHHHHHHHC-C-CceeeccEEEec
Q 005365 316 EMLLRIKQQ-G-LDITPQILIITR 337 (700)
Q Consensus 316 eLa~~L~~~-G-heV~~~i~VvT~ 337 (700)
.|+..++.+ | +.|. +++.
T Consensus 213 kLa~~~~~~~g~~~V~----li~~ 232 (282)
T TIGR03499 213 KLAARFVLEHGNKKVA----LITT 232 (282)
T ss_pred HHHHHHHHHcCCCeEE----EEEC
Confidence 566677776 5 8998 8874
No 283
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=21.42 E-value=2.2e+02 Score=28.51 Aligned_cols=48 Identities=29% Similarity=0.413 Sum_probs=35.1
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEE
Q 005365 384 WPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (700)
Q Consensus 384 ~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V 432 (700)
|.........+++.+.+. +.+||+|++-.-.|-..|.+++..++++-+
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l 56 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPL 56 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCce
Confidence 455556666677777643 458999999776777789999999988433
No 284
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=21.27 E-value=2.3e+02 Score=30.11 Aligned_cols=26 Identities=23% Similarity=0.542 Sum_probs=21.5
Q ss_pred cCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 299 ~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
|||+-+.|. +++.|++.|++.|+.|.
T Consensus 250 TGG~HRSV~-----iae~La~~L~~~~~~v~ 275 (284)
T PF03668_consen 250 TGGQHRSVA-----IAERLAERLREKGYTVV 275 (284)
T ss_pred CCCcCcHHH-----HHHHHHHHHHhcCCcce
Confidence 599988777 44578899999999987
No 285
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=20.78 E-value=2.2e+02 Score=30.51 Aligned_cols=67 Identities=13% Similarity=0.234 Sum_probs=38.0
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCC----CCCCCcccee
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDA----VGTTCGQRLE 352 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~----~~~~~~~~~e 352 (700)
||+++++. .||+..-+..-| +|..++++|+.|- +++....+. -+........
T Consensus 1 ~r~~~~~G--------------KGGVGKTT~aaA------~A~~~A~~G~rtL----lvS~Dpa~~L~d~l~~~~~~~~~ 56 (305)
T PF02374_consen 1 MRILFFGG--------------KGGVGKTTVAAA------LALALARRGKRTL----LVSTDPAHSLSDVLGQKLGGEPT 56 (305)
T ss_dssp -SEEEEEE--------------STTSSHHHHHHH------HHHHHHHTTS-EE----EEESSTTTHHHHHHTS--BSS-E
T ss_pred CeEEEEec--------------CCCCCcHHHHHH------HHHHHhhCCCCee----EeecCCCccHHHHhCCcCCCCCe
Confidence 67777763 278888887444 4456889999987 776543222 1233333445
Q ss_pred EecCccceEEEEecC
Q 005365 353 KVYGTKYSDILRVPF 367 (700)
Q Consensus 353 ~i~~~~~v~I~rvp~ 367 (700)
.+.+.+|.....+..
T Consensus 57 ~v~~~~~L~a~eid~ 71 (305)
T PF02374_consen 57 KVEGVPNLSAMEIDP 71 (305)
T ss_dssp EETTCSSEEEEE--H
T ss_pred EecCCCCceeeecCH
Confidence 666667777777654
Done!