Query 005365
Match_columns 700
No_of_seqs 409 out of 3054
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 23:16:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005365.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005365hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s28_A Sucrose synthase 1; gly 100.0 6E-160 2E-164 1410.3 53.8 696 4-699 6-751 (816)
2 2r60_A Glycosyl transferase, g 100.0 1.5E-40 5.2E-45 374.8 34.3 395 274-699 5-441 (499)
3 3c48_A Predicted glycosyltrans 100.0 1.8E-37 6.2E-42 342.5 37.0 374 275-699 19-408 (438)
4 3fro_A GLGA glycogen synthase; 100.0 1E-37 3.4E-42 342.8 33.5 369 276-698 2-412 (439)
5 3vue_A GBSS-I, granule-bound s 100.0 2.1E-34 7.1E-39 328.7 31.9 278 404-695 152-492 (536)
6 3okp_A GDP-mannose-dependent a 100.0 1.9E-34 6.4E-39 312.6 28.7 337 275-699 3-361 (394)
7 2qzs_A Glycogen synthase; glyc 100.0 1.8E-34 6.1E-39 323.6 28.5 380 277-695 1-457 (485)
8 2jjm_A Glycosyl transferase, g 100.0 1.4E-33 4.7E-38 307.6 32.1 329 297-698 24-366 (394)
9 1rzu_A Glycogen synthase 1; gl 100.0 4.5E-34 1.5E-38 320.3 28.9 382 277-695 1-456 (485)
10 2iw1_A Lipopolysaccharide core 100.0 1E-34 3.4E-39 312.8 17.5 335 277-699 1-354 (374)
11 2gek_A Phosphatidylinositol ma 100.0 1.8E-33 6E-38 306.5 27.2 340 274-698 18-365 (406)
12 2x6q_A Trehalose-synthase TRET 100.0 1.2E-32 4E-37 302.5 19.4 256 405-699 126-396 (416)
13 3oy2_A Glycosyltransferase B73 100.0 7.6E-32 2.6E-36 295.4 22.3 335 277-699 1-372 (413)
14 2iuy_A Avigt4, glycosyltransfe 100.0 9.4E-32 3.2E-36 287.5 20.5 281 276-676 3-306 (342)
15 2x0d_A WSAF; GT4 family, trans 100.0 7.5E-29 2.6E-33 274.1 18.6 327 274-688 44-385 (413)
16 1f0k_A MURG, UDP-N-acetylgluco 99.9 1E-25 3.5E-30 242.2 23.8 312 275-697 5-338 (364)
17 2hy7_A Glucuronosyltransferase 99.9 1.1E-26 3.7E-31 256.1 15.0 216 405-677 124-351 (406)
18 3beo_A UDP-N-acetylglucosamine 99.9 8.9E-24 3E-28 227.8 22.7 259 392-696 85-356 (375)
19 2vsy_A XCC0866; transferase, g 99.9 4.9E-23 1.7E-27 235.3 28.6 145 528-697 378-537 (568)
20 1vgv_A UDP-N-acetylglucosamine 99.9 3.1E-23 1E-27 224.6 21.8 259 392-696 76-356 (384)
21 3nb0_A Glycogen [starch] synth 99.9 1.5E-23 5.2E-28 238.4 20.1 283 404-698 180-615 (725)
22 1uqt_A Alpha, alpha-trehalose- 99.9 3.1E-22 1E-26 225.1 27.1 270 405-699 123-437 (482)
23 2bfw_A GLGA glycogen synthase; 99.9 7E-23 2.4E-27 201.6 16.5 156 528-699 38-198 (200)
24 1v4v_A UDP-N-acetylglucosamine 99.9 1.1E-20 3.6E-25 204.4 26.4 255 393-693 82-345 (376)
25 3t5t_A Putative glycosyltransf 99.9 3.6E-20 1.2E-24 207.0 27.2 282 393-700 136-457 (496)
26 3qhp_A Type 1 capsular polysac 99.9 2.7E-21 9.2E-26 184.7 14.9 151 528-698 4-156 (166)
27 2xci_A KDO-transferase, 3-deox 99.9 2.9E-21 9.9E-26 210.5 15.7 203 467-699 148-362 (374)
28 2f9f_A First mannosyl transfer 99.9 2.4E-21 8E-26 188.3 12.5 154 522-694 19-175 (177)
29 3otg_A CALG1; calicheamicin, T 99.8 3.1E-17 1.1E-21 179.2 21.3 345 274-699 18-393 (412)
30 3rhz_A GTF3, nucleotide sugar 99.7 9.4E-17 3.2E-21 172.5 20.6 232 404-698 73-318 (339)
31 3s2u_A UDP-N-acetylglucosamine 99.7 6.6E-15 2.3E-19 159.6 29.4 321 275-696 1-338 (365)
32 4fzr_A SSFS6; structural genom 99.6 1.9E-15 6.6E-20 164.7 17.4 97 586-698 282-384 (398)
33 3tsa_A SPNG, NDP-rhamnosyltran 99.6 1.4E-15 4.8E-20 165.1 14.8 140 531-698 224-372 (391)
34 2iyf_A OLED, oleandomycin glyc 99.6 4.1E-14 1.4E-18 155.6 25.3 97 586-698 281-383 (430)
35 3oti_A CALG3; calicheamicin, T 99.6 6E-14 2E-18 153.0 22.3 137 529-698 236-381 (398)
36 3dzc_A UDP-N-acetylglucosamine 99.6 7.8E-14 2.7E-18 152.9 22.4 260 388-693 97-378 (396)
37 3ia7_A CALG4; glycosysltransfe 99.6 8.4E-14 2.9E-18 151.0 19.8 96 586-697 279-381 (402)
38 3ot5_A UDP-N-acetylglucosamine 99.6 2.7E-13 9.3E-18 149.0 23.6 260 388-693 100-372 (403)
39 2p6p_A Glycosyl transferase; X 99.5 4.2E-13 1.4E-17 145.3 22.8 95 586-697 262-362 (384)
40 3rsc_A CALG2; TDP, enediyne, s 99.5 1.2E-12 4.1E-17 143.1 21.8 96 586-697 295-396 (415)
41 2yjn_A ERYCIII, glycosyltransf 99.3 2.7E-11 9.4E-16 134.0 18.1 137 529-697 271-418 (441)
42 4amg_A Snogd; transferase, pol 99.2 2.6E-10 8.7E-15 123.7 15.1 93 585-695 285-381 (400)
43 4hwg_A UDP-N-acetylglucosamine 99.1 5.1E-10 1.8E-14 122.1 16.8 247 389-689 81-349 (385)
44 3h4t_A Glycosyltransferase GTF 99.1 4.4E-09 1.5E-13 115.1 23.3 93 585-694 265-363 (404)
45 2iya_A OLEI, oleandomycin glyc 99.1 6.5E-09 2.2E-13 114.0 24.5 95 586-696 303-403 (424)
46 3q3e_A HMW1C-like glycosyltran 99.0 3.8E-09 1.3E-13 120.1 18.8 154 528-697 441-603 (631)
47 1iir_A Glycosyltransferase GTF 99.0 5.4E-08 1.9E-12 106.5 23.0 93 586-695 283-381 (415)
48 1rrv_A Glycosyltransferase GTF 98.9 1.7E-07 5.8E-12 102.5 23.8 92 585-693 283-380 (416)
49 2o6l_A UDP-glucuronosyltransfe 98.8 1.1E-08 3.8E-13 97.7 9.9 130 530-692 26-164 (170)
50 2c4m_A Glycogen phosphorylase; 98.8 5.8E-08 2E-12 112.6 16.8 140 526-670 516-678 (796)
51 1l5w_A Maltodextrin phosphoryl 98.7 3.6E-07 1.2E-11 106.0 18.5 139 525-669 525-684 (796)
52 2gj4_A Glycogen phosphorylase, 98.7 7.4E-07 2.5E-11 103.8 20.3 136 527-668 551-707 (824)
53 2pq6_A UDP-glucuronosyl/UDP-gl 97.9 0.0013 4.4E-08 73.4 23.2 95 587-697 352-453 (482)
54 3hbf_A Flavonoid 3-O-glucosylt 97.8 0.0025 8.6E-08 70.6 23.8 93 587-696 326-427 (454)
55 2c1x_A UDP-glucose flavonoid 3 97.8 0.0013 4.5E-08 72.9 20.6 94 587-696 324-425 (456)
56 2acv_A Triterpene UDP-glucosyl 97.7 0.0039 1.3E-07 69.1 24.3 78 588-676 332-423 (463)
57 2vch_A Hydroquinone glucosyltr 97.7 0.0039 1.3E-07 69.6 23.1 51 626-676 367-427 (480)
58 4gyw_A UDP-N-acetylglucosamine 97.1 0.0048 1.7E-07 72.3 14.8 154 529-698 524-684 (723)
59 1psw_A ADP-heptose LPS heptosy 97.0 0.01 3.6E-07 62.4 15.3 89 537-642 193-286 (348)
60 3hbm_A UDP-sugar hydrolase; PS 97.0 0.044 1.5E-06 56.6 19.3 54 575-643 198-251 (282)
61 3tov_A Glycosyl transferase fa 96.9 0.061 2.1E-06 57.1 20.1 83 542-642 204-286 (349)
62 2gt1_A Lipopolysaccharide hept 94.3 1.7 5.9E-05 44.9 18.2 81 543-642 198-278 (326)
63 1ygp_A Yeast glycogen phosphor 92.7 0.27 9.3E-06 57.4 9.3 132 526-662 600-761 (879)
64 1xv5_A AGT, DNA alpha-glucosyl 75.0 63 0.0021 31.3 28.3 157 528-699 199-384 (401)
65 1j9j_A Stationary phase surviV 72.9 37 0.0013 33.9 12.6 35 402-436 83-128 (247)
66 2phj_A 5'-nucleotidase SURE; S 71.7 34 0.0012 34.3 11.9 33 404-436 84-127 (251)
67 2jzc_A UDP-N-acetylglucosamine 65.0 2.9 9.9E-05 41.4 2.5 73 589-675 115-196 (224)
68 4b4o_A Epimerase family protei 64.1 4 0.00014 41.3 3.5 33 277-338 1-33 (298)
69 3ius_A Uncharacterized conserv 60.5 4.1 0.00014 40.8 2.7 36 274-339 3-38 (286)
70 2e6c_A 5'-nucleotidase SURE; S 58.6 72 0.0025 31.7 11.4 34 403-436 85-129 (244)
71 4gi5_A Quinone reductase; prot 56.0 11 0.00039 38.4 5.1 36 276-329 22-57 (280)
72 4egb_A DTDP-glucose 4,6-dehydr 54.3 64 0.0022 32.8 10.8 14 316-329 39-52 (346)
73 3heb_A Response regulator rece 54.2 1.1E+02 0.0037 26.5 11.9 98 573-676 16-133 (152)
74 1l5x_A SurviVal protein E; str 51.5 1.7E+02 0.0059 29.5 13.0 34 403-436 82-127 (280)
75 2vzf_A NADH-dependent FMN redu 50.5 15 0.00051 34.9 4.7 37 275-329 1-38 (197)
76 1uan_A Hypothetical protein TT 48.7 18 0.00061 35.5 5.1 22 389-413 82-103 (227)
77 3p0r_A Azoreductase; structura 47.6 20 0.00067 34.7 5.1 39 275-329 3-43 (211)
78 3kht_A Response regulator; PSI 46.5 1.4E+02 0.0047 25.5 11.4 100 573-678 17-128 (144)
79 3l7i_A Teichoic acid biosynthe 45.3 3E+02 0.01 31.4 15.6 226 406-676 418-681 (729)
80 3m2p_A UDP-N-acetylglucosamine 44.9 13 0.00044 37.6 3.5 35 275-338 1-35 (311)
81 2ixd_A LMBE-related protein; h 43.8 44 0.0015 33.0 7.1 22 389-413 84-105 (242)
82 1t2a_A GDP-mannose 4,6 dehydra 43.0 73 0.0025 32.8 9.1 20 316-339 39-58 (375)
83 2fzv_A Putative arsenical resi 42.5 25 0.00087 35.7 5.2 38 274-329 56-93 (279)
84 2wqk_A 5'-nucleotidase SURE; S 42.4 2E+02 0.0067 28.6 11.7 33 404-436 84-127 (251)
85 1k68_A Phytochrome response re 42.1 1.5E+02 0.0051 24.7 11.9 99 573-677 14-130 (140)
86 1k66_A Phytochrome response re 42.1 1.6E+02 0.0054 24.9 11.9 99 573-677 18-137 (149)
87 3to5_A CHEY homolog; alpha(5)b 41.2 28 0.00094 31.1 4.7 64 613-676 58-131 (134)
88 3ty2_A 5'-nucleotidase SURE; s 41.0 75 0.0026 31.9 8.2 36 277-339 12-47 (261)
89 1d4a_A DT-diaphorase, quinone 40.9 28 0.00096 35.0 5.2 37 275-329 1-37 (273)
90 2pln_A HP1043, response regula 38.7 1.8E+02 0.006 24.5 10.5 93 573-676 30-131 (137)
91 1kjq_A GART 2, phosphoribosylg 38.6 1.7E+02 0.0059 30.2 11.3 18 316-337 25-42 (391)
92 3s5p_A Ribose 5-phosphate isom 37.4 27 0.00094 32.6 4.0 33 274-329 19-51 (166)
93 3ph3_A Ribose-5-phosphate isom 37.3 25 0.00086 33.0 3.7 35 272-329 16-50 (169)
94 3ew7_A LMO0794 protein; Q8Y8U8 36.7 22 0.00075 33.5 3.5 19 316-338 15-33 (221)
95 3nhm_A Response regulator; pro 36.1 1.1E+02 0.0039 25.5 7.9 76 603-678 37-122 (133)
96 3i83_A 2-dehydropantoate 2-red 35.8 19 0.00066 37.0 3.1 19 316-338 16-34 (320)
97 2q62_A ARSH; alpha/beta, flavo 35.5 56 0.0019 32.4 6.4 47 265-329 22-69 (247)
98 3h2s_A Putative NADH-flavin re 35.0 24 0.00082 33.4 3.5 19 316-338 15-33 (224)
99 2vvp_A Ribose-5-phosphate isom 34.7 28 0.00095 32.5 3.6 30 277-329 4-33 (162)
100 2l2q_A PTS system, cellobiose- 33.6 53 0.0018 28.0 5.1 35 274-329 2-36 (109)
101 2v4n_A Multifunctional protein 33.5 1.5E+02 0.0052 29.5 9.1 35 402-436 81-126 (254)
102 2x4g_A Nucleoside-diphosphate- 33.2 29 0.001 35.2 4.0 20 316-339 28-47 (342)
103 3hn2_A 2-dehydropantoate 2-red 33.0 23 0.0008 36.2 3.1 19 316-338 16-34 (312)
104 3h5i_A Response regulator/sens 32.5 2.3E+02 0.0078 23.9 12.6 97 573-677 17-123 (140)
105 2dvz_A BUGE, putative exported 32.0 3.9E+02 0.013 27.1 12.4 102 580-693 162-280 (314)
106 3g17_A Similar to 2-dehydropan 31.3 19 0.00065 36.5 2.1 19 316-338 16-34 (294)
107 2zay_A Response regulator rece 31.3 81 0.0028 27.1 6.2 77 603-679 42-129 (147)
108 3sc6_A DTDP-4-dehydrorhamnose 31.0 14 0.00047 36.8 1.0 18 316-337 20-37 (287)
109 1hdo_A Biliverdin IX beta redu 30.7 33 0.0011 31.8 3.6 20 316-339 18-37 (206)
110 3n53_A Response regulator rece 30.4 1.1E+02 0.0039 25.9 6.9 74 603-676 36-120 (140)
111 3vps_A TUNA, NAD-dependent epi 30.3 32 0.0011 34.4 3.7 21 316-340 22-42 (321)
112 3dfu_A Uncharacterized protein 29.7 33 0.0011 33.9 3.4 34 274-337 4-37 (232)
113 3bfv_A CAPA1, CAPB2, membrane 29.5 52 0.0018 32.9 5.0 34 185-220 6-39 (271)
114 1rcu_A Conserved hypothetical 29.1 33 0.0011 33.0 3.2 66 607-675 113-192 (195)
115 3c24_A Putative oxidoreductase 28.9 34 0.0011 34.4 3.5 19 316-338 26-44 (286)
116 3vot_A L-amino acid ligase, BL 28.4 4.1E+02 0.014 27.8 12.3 18 317-338 20-37 (425)
117 3dhn_A NAD-dependent epimerase 28.2 30 0.001 32.9 2.8 20 316-339 19-38 (227)
118 3tem_A Ribosyldihydronicotinam 28.2 50 0.0017 32.2 4.5 35 277-329 2-36 (228)
119 3r6d_A NAD-dependent epimerase 28.1 34 0.0011 32.5 3.2 19 316-338 20-39 (221)
120 2cp8_A NEXT to BRCA1 gene 1 pr 28.0 53 0.0018 24.7 3.5 20 217-236 2-21 (54)
121 3e48_A Putative nucleoside-dip 27.8 1.9E+02 0.0064 28.3 8.9 20 316-339 15-35 (289)
122 3dqp_A Oxidoreductase YLBE; al 27.8 29 0.00099 32.9 2.6 20 316-339 15-34 (219)
123 3rpe_A MDAB, modulator of drug 27.7 75 0.0026 30.9 5.6 40 276-329 25-64 (218)
124 3gt7_A Sensor protein; structu 27.7 97 0.0033 27.1 6.1 101 573-681 19-130 (154)
125 3tpc_A Short chain alcohol deh 27.6 2E+02 0.0068 27.8 9.0 20 316-339 22-41 (257)
126 3c1o_A Eugenol synthase; pheny 27.6 38 0.0013 34.1 3.7 20 316-339 19-38 (321)
127 1qkk_A DCTD, C4-dicarboxylate 27.5 1.4E+02 0.0049 25.8 7.2 96 574-677 16-120 (155)
128 3qay_A Endolysin; amidase A/B 27.4 95 0.0032 29.1 6.1 53 277-338 2-56 (180)
129 3cg4_A Response regulator rece 27.3 1.7E+02 0.0059 24.6 7.6 97 573-677 19-126 (142)
130 3k7p_A Ribose 5-phosphate isom 27.3 48 0.0016 31.3 3.9 32 275-329 21-54 (179)
131 2r6j_A Eugenol synthase 1; phe 27.2 42 0.0014 33.8 3.9 20 316-339 26-45 (318)
132 2vvr_A Ribose-5-phosphate isom 26.9 56 0.0019 30.0 4.2 30 277-329 2-31 (149)
133 3ic5_A Putative saccharopine d 26.7 42 0.0014 27.9 3.2 19 316-338 19-38 (118)
134 1z82_A Glycerol-3-phosphate de 26.7 34 0.0012 35.2 3.1 19 316-338 28-46 (335)
135 3i6i_A Putative leucoanthocyan 26.4 35 0.0012 35.0 3.1 20 316-339 25-44 (346)
136 4e7p_A Response regulator; DNA 26.3 3E+02 0.01 23.4 9.8 75 603-677 56-139 (150)
137 3hzh_A Chemotaxis response reg 26.1 3.2E+02 0.011 23.6 9.6 75 602-676 70-155 (157)
138 2dwc_A PH0318, 433AA long hypo 25.8 1.6E+02 0.0055 31.1 8.4 18 316-337 33-50 (433)
139 3trh_A Phosphoribosylaminoimid 25.8 2.3E+02 0.008 26.4 8.2 115 569-692 17-150 (169)
140 3ors_A N5-carboxyaminoimidazol 25.5 2.3E+02 0.0079 26.2 8.1 115 569-692 14-147 (163)
141 2pn1_A Carbamoylphosphate synt 25.2 1.7E+02 0.0057 29.5 8.1 17 393-412 63-79 (331)
142 3ego_A Probable 2-dehydropanto 24.9 36 0.0012 34.7 2.9 17 317-338 17-33 (307)
143 2r85_A PURP protein PF1517; AT 24.8 59 0.002 32.9 4.5 19 316-338 15-33 (334)
144 3grc_A Sensor protein, kinase; 24.8 3E+02 0.01 22.9 12.7 99 573-679 18-128 (140)
145 1ek6_A UDP-galactose 4-epimera 24.8 44 0.0015 34.0 3.6 19 316-338 17-35 (348)
146 3kcn_A Adenylate cyclase homol 24.7 1.1E+02 0.0037 26.5 5.8 76 602-677 36-122 (151)
147 2f5x_A BUGD; periplasmic bindi 24.7 4.6E+02 0.016 26.5 11.4 102 580-693 158-276 (312)
148 3h1g_A Chemotaxis protein CHEY 24.6 3E+02 0.01 22.7 13.5 97 573-676 17-125 (129)
149 3ilh_A Two component response 24.4 3.1E+02 0.011 22.9 10.6 97 574-676 22-137 (146)
150 1iow_A DD-ligase, DDLB, D-ALA\ 24.4 62 0.0021 32.3 4.5 19 316-338 25-43 (306)
151 1kjn_A MTH0777; hypotethical p 24.4 95 0.0033 28.5 5.1 14 316-329 27-40 (157)
152 1y81_A Conserved hypothetical 24.3 2.9E+02 0.01 24.3 8.6 19 316-338 32-50 (138)
153 3qvo_A NMRA family protein; st 24.3 33 0.0011 33.1 2.3 20 316-339 38-58 (236)
154 1jwq_A N-acetylmuramoyl-L-alan 24.2 89 0.0031 29.3 5.3 26 308-338 28-54 (179)
155 3fvw_A Putative NAD(P)H-depend 24.2 58 0.002 30.6 4.0 36 275-329 1-36 (192)
156 3r6w_A FMN-dependent NADH-azor 23.7 77 0.0026 30.1 4.8 36 276-329 1-39 (212)
157 3ikm_A DNA polymerase subunit 23.5 56 0.0019 39.3 4.3 79 156-242 6-108 (1172)
158 2qpq_A Protein BUG27; alpha/be 23.4 4E+02 0.014 26.7 10.5 85 603-693 167-267 (301)
159 2ywr_A Phosphoribosylglycinami 23.4 2.1E+02 0.0071 27.6 7.9 44 390-438 68-111 (216)
160 2ew2_A 2-dehydropantoate 2-red 23.3 43 0.0015 33.6 3.1 19 316-338 17-35 (316)
161 3slg_A PBGP3 protein; structur 23.3 62 0.0021 33.3 4.4 20 316-339 39-59 (372)
162 2ydy_A Methionine adenosyltran 23.1 41 0.0014 33.8 2.8 19 316-338 17-35 (315)
163 2qvg_A Two component response 23.1 3.3E+02 0.011 22.7 12.3 98 573-676 19-133 (143)
164 3lp6_A Phosphoribosylaminoimid 22.4 3.6E+02 0.012 25.2 8.8 114 569-692 18-149 (174)
165 3l4e_A Uncharacterized peptida 22.1 1.5E+02 0.0051 28.4 6.5 84 557-646 27-123 (206)
166 4dad_A Putative pilus assembly 22.0 1.3E+02 0.0043 25.8 5.6 66 612-677 67-140 (146)
167 1n7h_A GDP-D-mannose-4,6-dehyd 21.8 59 0.002 33.7 3.8 20 316-339 43-62 (381)
168 3cu5_A Two component transcrip 21.7 2.7E+02 0.0091 23.6 7.8 74 603-676 39-121 (141)
169 1dcf_A ETR1 protein; beta-alph 21.4 3.5E+02 0.012 22.4 9.5 95 574-676 20-127 (136)
170 3gl9_A Response regulator; bet 21.3 1.6E+02 0.0055 24.3 6.1 95 574-676 15-120 (122)
171 3f6r_A Flavodoxin; FMN binding 20.9 75 0.0026 28.0 3.9 19 314-336 19-37 (148)
172 3ruf_A WBGU; rossmann fold, UD 20.8 68 0.0023 32.6 4.0 20 316-339 40-59 (351)
173 2a5l_A Trp repressor binding p 20.8 82 0.0028 29.2 4.3 16 314-329 23-38 (200)
174 1dbw_A Transcriptional regulat 20.7 2.6E+02 0.0088 22.9 7.3 95 574-676 16-119 (126)
175 2w6a_A ARF GTPase-activating p 20.7 24 0.00083 26.9 0.4 20 104-123 4-23 (63)
176 1i3c_A Response regulator RCP1 20.6 3.9E+02 0.013 22.7 11.6 99 573-677 20-136 (149)
177 3e8x_A Putative NAD-dependent 20.5 62 0.0021 30.9 3.5 20 316-339 36-55 (236)
178 1tvm_A PTS system, galactitol- 20.4 2E+02 0.0067 24.6 6.3 42 274-339 19-60 (113)
179 3cnb_A DNA-binding response re 20.2 1.6E+02 0.0056 24.7 5.9 99 573-678 20-130 (143)
180 2rh8_A Anthocyanidin reductase 20.2 60 0.002 32.9 3.4 19 316-338 24-42 (338)
181 2c20_A UDP-glucose 4-epimerase 20.2 69 0.0024 32.2 3.9 19 316-338 16-34 (330)
182 3t6k_A Response regulator rece 20.1 1.6E+02 0.0056 24.9 5.9 96 574-677 17-123 (136)
No 1
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=5.5e-160 Score=1410.32 Aligned_cols=696 Identities=79% Similarity=1.267 Sum_probs=642.0
Q ss_pred cccccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhhHhhhcccCCCcHHHHHhhcceeeEcCCe
Q 005365 4 RALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAIVLPPW 83 (700)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (700)
++|+|++||+|+++++|++||++|++||++|+++||+||++|||+++|++++++++.++.+|+||++|++||||||.|||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (816)
T 3s28_A 6 RMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPW 85 (816)
T ss_dssp ---------------------CTTHHHHHHHHHHHTCSEEEEHHHHHHTTTTTSCGGGCCCSTHHHHHHTEEEEEECSSE
T ss_pred cccccchhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHhhhcccccCcHHHHHHhhhheeecCCe
Confidence 68999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred EEEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCCCCCCceeeeecccccCCCCCCCCCCCCCchhhhhhHh
Q 005365 84 VALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRH 163 (700)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (700)
||||||||||+|||||||++||+||+||++|||+|||+|||++.+++++||+||+|||++||++++|+||||||+|||||
T Consensus 86 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (816)
T 3s28_A 86 VALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRH 165 (816)
T ss_dssp EEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHHHHHHHSSCCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHHHHHH
T ss_pred EEEEEcCCCcceEEEEEEhhhCceeeecHHHHHHhHHHhcCCCCCCCCceEEeccccccCCCCCCCcccccCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCcchHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHHhhcCCccccCcc
Q 005365 164 LSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDT 243 (700)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 243 (700)
||||||+|++++++||+||+.|+|+|++|||||||+|+++|++||++|++||+++|+||||++|+++||+||||||||||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (816)
T 3s28_A 166 LSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDN 245 (816)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTCCSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBCSCSB
T ss_pred HHhhhcCChhhhHHHHHHHHHcccCCeeeeccCCcCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCccchhhhhcCCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHH
Q 005365 244 AERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQ 323 (700)
Q Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~ 323 (700)
|+||+|||++|+++|++|||++||+|++|+||+|||+|+|+|||++|.+++|+||||||++||+||||||+++|+++|++
T Consensus 246 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~ 325 (816)
T 3s28_A 246 AERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQ 325 (816)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCcccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcC
Q 005365 324 QGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQ 403 (700)
Q Consensus 324 ~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~ 403 (700)
+||+|+|+|+|+|+.+++..++.|+++.+.+.++++++|+|+|+++.++++++|+++..+|+|+..|+..+.+.+....+
T Consensus 326 ~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~ 405 (816)
T 3s28_A 326 QGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELN 405 (816)
T ss_dssp TTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCS
T ss_pred CCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999989999999999999999999999999988788899999999999999999888887777767
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
++|||||+|++.+++++.++++++|+|+|+|.|++...++..++..|..+...|++.+++.+|+.+++.||.||++|.++
T Consensus 406 ~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~ 485 (816)
T 3s28_A 406 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQE 485 (816)
T ss_dssp SCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHH
T ss_pred CCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHH
Confidence 78999999999999999999999999999999999888888778889888889999999999999999999999999999
Q ss_pred HHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCcccc---------------------------------
Q 005365 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSI--------------------------------- 530 (700)
Q Consensus 484 ~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d~~~--------------------------------- 530 (700)
++.+++.+++|..+..+++|+++++.+||+.+.+++.+||||+|...
T Consensus 486 ~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg 565 (816)
T 3s28_A 486 IAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLC 565 (816)
T ss_dssp HHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEES
T ss_pred HHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhc
Confidence 98888888999998899999999999999999999999999988543
Q ss_pred -----------ccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCC------hhhHHHHHHHHHHHHHcCCCCcEEEe
Q 005365 531 -----------YFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKD------LEEQAEMKKMYSLIDQYKLNGQFRWI 593 (700)
Q Consensus 531 -----------F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd------~ee~~~~~~l~~li~~l~L~~~V~fl 593 (700)
|+|++.+.||++.+++|+..+....++..++++|.|. .++.++.++++++++++++.++|+|+
T Consensus 566 ~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~fl 645 (816)
T 3s28_A 566 VLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645 (816)
T ss_dssp CBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEE
T ss_pred ccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEc
Confidence 4566677899999999999988766678899998876 23445778999999999999999999
Q ss_pred ccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHH
Q 005365 594 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILV 673 (700)
Q Consensus 594 G~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~ 673 (700)
|++++.++.+++++++++++|+||+||.+|+||++++||||||+|||+|+.||++|++.++.+|++++|+|++++|++|.
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~ 725 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLA 725 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHH
T ss_pred cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHH
Confidence 99888888899999999658999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 674 DFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 674 ~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++++++..|++.+++|+++|++++.+
T Consensus 726 ~lL~~Ll~d~~~~~~m~~~ar~~a~~ 751 (816)
T 3s28_A 726 DFFTKCKEDPSHWDEISKGGLQRIEE 751 (816)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 98877778999999999999999854
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=1.5e-40 Score=374.83 Aligned_cols=395 Identities=26% Similarity=0.380 Sum_probs=284.7
Q ss_pred CcceEEEEEccccccccCC--cCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccce
Q 005365 274 PMVFNVVILTPHGYFAQDD--VLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRL 351 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~--~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~ 351 (700)
.|+|||++++++++|.... +.+.+..||.++++. +|+++|+++||+|+ |+|..........+....
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~ 72 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVK--------EVSLALAEMGVQVD----IITRRIKDENWPEFSGEI 72 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCCBTTBGGGCCSE
T ss_pred cccceEEEEecCCCccccccccCCCCCCCCeeehHH--------HHHHHHHhcCCeEE----EEeCCCCcccccchhhhH
Confidence 3458999999998875422 234577899999999 66667799999999 998654321101122223
Q ss_pred eEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcE
Q 005365 352 EKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ 431 (700)
Q Consensus 352 e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~ 431 (700)
+.+....+++++++|..... +..+..+|.++..+...+.+.+++. ..+|||||+|.+..++++.++++..++|+
T Consensus 73 ~~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~Divh~~~~~~~~~~~~~~~~~~~p~ 146 (499)
T 2r60_A 73 DYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYREE-GKFPQVVTTHYGDGGLAGVLLKNIKGLPF 146 (499)
T ss_dssp EECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHCCCE
T ss_pred HhccCCCCeEEEEecCCCcC-----CcCHHHHHHHHHHHHHHHHHHHHhc-CCCCCEEEEcCCcchHHHHHHHHhcCCcE
Confidence 33312347899999875432 1233445666655555566666553 23799999998777778888888899999
Q ss_pred EEEecCCccccCC---CCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhh--hccccccccccCCCeE
Q 005365 432 CTIAHALEKTKYP---DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT--VGQYESHTAFTLPGLY 506 (700)
Q Consensus 432 V~t~H~l~~~~~~---~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~--~~~y~~~~~~~~p~l~ 506 (700)
|++.|+....... ........+...+++......++.+++.||.||++|...++.+.+. ++...+ ......+.
T Consensus 147 v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~--~~~~~ki~ 224 (499)
T 2r60_A 147 TFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVN--VEDDDKFS 224 (499)
T ss_dssp EEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCC--TTCGGGEE
T ss_pred EEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhccccccc--ccCCCCeE
Confidence 9999997433211 0000001111122222333346788999999999998776544333 220000 00112467
Q ss_pred EeecCCCCCCCccee--------------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCc-cEEEEec
Q 005365 507 RVVHGIDVFDPKFNI--------------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN-KEHLKES 565 (700)
Q Consensus 507 ~v~nGId~~~~k~~v--------------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~-~l~i~g~ 565 (700)
+++||++. ..+.. ++++....+|+|++.+.||++.+++|+..+....++. .++++|.
T Consensus 225 vi~ngvd~--~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~ 302 (499)
T 2r60_A 225 VIPPGVNT--RVFDGEYGDKIKAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRG 302 (499)
T ss_dssp ECCCCBCT--TTSSSCCCHHHHHHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESS
T ss_pred EECCCcCh--hhcCccchhhhHHHHHHHhcccccccCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECC
Confidence 88999984 22221 3445567889999999999999999999887653333 5777776
Q ss_pred CChh----------hHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccC----cEEEeCCCCCCccHHHHH
Q 005365 566 KDLE----------EQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTK----GAFVQPALYEAFGLTVVE 631 (700)
Q Consensus 566 Gd~e----------e~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~a----DvfV~PS~~E~fGl~vlE 631 (700)
++++ +.++.++++++++++++.++|+|+| .++.+++..+|+. + |++|+||.+|+||++++|
T Consensus 303 ~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G----~v~~~~~~~~~~~-a~~~~dv~v~pS~~Eg~~~~~lE 377 (499)
T 2r60_A 303 IENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP----LNSQQELAGCYAY-LASKGSVFALTSFYEPFGLAPVE 377 (499)
T ss_dssp CSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE----CCSHHHHHHHHHH-HHHTTCEEEECCSCBCCCSHHHH
T ss_pred CCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC----CCCHHHHHHHHHh-cCcCCCEEEECcccCCCCcHHHH
Confidence 3332 3344788999999999999999999 6667899999997 9 999999999999999999
Q ss_pred HHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 632 AMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 632 AMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|||||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 378 Ama~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 378 AMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF----ESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp HHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHH----SCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 8999999999999998865
No 3
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=1.8e-37 Score=342.52 Aligned_cols=374 Identities=18% Similarity=0.221 Sum_probs=266.2
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
.+|||++++.+++|.. .+|.+..||.++++. +|+++|+++||+|+ |+|....... ...+..
T Consensus 19 ~mmkIl~i~~~~~p~~--~~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-----~~~~~~ 79 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQ--QPGTGDSGGMNVYIL--------STATELAKQGIEVD----IYTRATRPSQ-----GEIVRV 79 (438)
T ss_dssp CCCEEEEECTTSCTTC--C-------CHHHHHH--------HHHHHHHHTTCEEE----EEEECCCGGG-----CSEEEE
T ss_pred chheeeeEEeeccccc--cCCCCCCCCHHHHHH--------HHHHHHHhcCCEEE----EEecCCCCCC-----cccccc
Confidence 4689999998877632 234457899999999 66667799999999 9886532110 011112
Q ss_pred cCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEE
Q 005365 355 YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI 434 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t 434 (700)
.+++++++++.....+ .++..++.++..|...+.+...+... +||+||+|.+..++++.++++..++|+|++
T Consensus 80 --~~~v~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~~ 151 (438)
T 3c48_A 80 --AENLRVINIAAGPYEG-----LSKEELPTQLAAFTGGMLSFTRREKV-TYDLIHSHYWLSGQVGWLLRDLWRIPLIHT 151 (438)
T ss_dssp --ETTEEEEEECCSCSSS-----CCGGGGGGGHHHHHHHHHHHHHHHTC-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEE
T ss_pred --cCCeEEEEecCCCccc-----cchhHHHHHHHHHHHHHHHHHHhccC-CCCEEEeCCccHHHHHHHHHHHcCCCEEEE
Confidence 1368888887654321 22234455555555555554222222 499999998777777777888889999999
Q ss_pred ecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC
Q 005365 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (700)
Q Consensus 435 ~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~ 514 (700)
.|+............ . ..........++.+++.+|.|+++|...++.+.+.++. ....+.+++||++.
T Consensus 152 ~h~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~-------~~~k~~vi~ngvd~ 219 (438)
T 3c48_A 152 AHTLAAVKNSYRDDS----D-TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDA-------DPDRISVVSPGADV 219 (438)
T ss_dssp CSSCHHHHSCC--------C-CHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCC-------CGGGEEECCCCCCT
T ss_pred ecCCccccccccccc----C-CcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCC-------ChhheEEecCCccc
Confidence 999754332110000 0 00000112236678999999999998877655554431 11236778899973
Q ss_pred CCCccee--------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCC--CccEEEEecCChhhHHHHHHHH
Q 005365 515 FDPKFNI--------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV--ENKEHLKESKDLEEQAEMKKMY 578 (700)
Q Consensus 515 ~~~k~~v--------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~--~~~l~i~g~Gd~ee~~~~~~l~ 578 (700)
..+.. ++++....+|+|+..+.||++.+++++..+....+ +..++++|..+.. .++.+.++
T Consensus 220 --~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~-g~~~~~l~ 296 (438)
T 3c48_A 220 --ELYSPGNDRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGP-NATPDTYR 296 (438)
T ss_dssp --TTSCCC----CHHHHHHTTCCSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------CHHH
T ss_pred --cccCCcccchhhhhHHhcCCCCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCC-CcHHHHHH
Confidence 22221 12344567899999999999999999999988765 5667777762110 13446788
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEE
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY 658 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~ 658 (700)
++++++++.++|.|+| .++.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|+
T Consensus 297 ~~~~~~~l~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~ 371 (438)
T 3c48_A 297 HMAEELGVEKRIRFLD----PRPPSELVAVYRA-ADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGL 371 (438)
T ss_dssp HHHHHTTCTTTEEEEC----CCCHHHHHHHHHH-CSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEE
T ss_pred HHHHHcCCCCcEEEcC----CCChHHHHHHHHh-CCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEE
Confidence 8999999999999999 6667899999997 9999999999999999999999999999999999999999999999
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 659 HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 659 lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++++|+++++++|.+++ +|++.+.+|+++|++++.+
T Consensus 372 ~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 372 LVDGHSPHAWADALATLL----DDDETRIRMGEDAVEHART 408 (438)
T ss_dssp EESSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998 7999999999999988753
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=1e-37 Score=342.81 Aligned_cols=369 Identities=16% Similarity=0.114 Sum_probs=266.4
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCC------Cc-
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT------CG- 348 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~------~~- 348 (700)
+|||++++++++| +..||.++++. +|+++|+++||+|+ |+|+..+...... ++
T Consensus 2 ~MkIl~v~~~~~p--------~~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 2 HMKVLLLGFEFLP--------VKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CCEEEEECSCCTT--------SCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTCSCCEEEEEEEETTE
T ss_pred ceEEEEEecccCC--------cccCCHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCchhhhhccccccCc
Confidence 5899999988764 25699999999 66777799999999 9997654432110 00
Q ss_pred -cceeEe-cCccceEEEEecCCCcccccccccccccchh-h-------HHHHHHHHHHHHHHHc--CCCCeEEEEcCCCc
Q 005365 349 -QRLEKV-YGTKYSDILRVPFRTEKGVVRKWISRFEVWP-Y-------LETYTEDVAVEIAKEL--QGKPDLIIGNYSDG 416 (700)
Q Consensus 349 -~~~e~i-~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~-~-------l~~f~~~~~~~l~~~~--~~~pDlIh~h~~~~ 416 (700)
...... ...+++.+++++. .. ..+..++. + +..|...+.+.+...+ ..+||+||+|.+..
T Consensus 62 ~~~~~~~~~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~ 133 (439)
T 3fro_A 62 EVQVKVSYEERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHT 133 (439)
T ss_dssp EEEEEEEEEEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGG
T ss_pred ccceeeeeccCCCceEEEecc-hh-------ccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhh
Confidence 000000 0224688888876 21 11122222 1 1224444444444431 45899999999888
Q ss_pred hHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccc
Q 005365 417 NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYES 496 (700)
Q Consensus 417 ~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~ 496 (700)
++++.++++..++|+|++.|+.....+.........+... ........++.+++.||.|+++|....+.....++
T Consensus 134 ~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~---- 208 (439)
T 3fro_A 134 VFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL-APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFR---- 208 (439)
T ss_dssp HHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGG-CCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHG----
T ss_pred hhhHHHHhhccCCCEEEEecccccccCchHHhCccccccc-cccceeeHhhhhhhhccEEEecCHHHHHHHhhhhh----
Confidence 8888888888999999999998654322111100000000 01111134678899999999999876653211111
Q ss_pred cccccCCCeEEeecCCCCCCCcceec-------------------CCCCccccccCCch-hhhchhhHHHHHHHHhhcC-
Q 005365 497 HTAFTLPGLYRVVHGIDVFDPKFNIV-------------------SPGADMSIYFPYTE-EKRRLKSFHPEIEELLYSD- 555 (700)
Q Consensus 497 ~~~~~~p~l~~v~nGId~~~~k~~vI-------------------p~G~d~~~F~g~~~-~~Kgl~~Ll~Ai~~Ll~~~- 555 (700)
.....+.+++||++. ..+... +++ ...+|+|+.. +.||++.+++|++.+....
T Consensus 209 ---~~~~~i~vi~ngvd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~ 282 (439)
T 3fro_A 209 ---NFEGKITYVFNGIDC--SFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKE 282 (439)
T ss_dssp ---GGTTSEEECCCCCCT--TTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGG
T ss_pred ---hcCCceeecCCCCCc--hhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhccc
Confidence 123457788999983 333221 333 6678999999 9999999999999998765
Q ss_pred -CCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHH
Q 005365 556 -VENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMT 634 (700)
Q Consensus 556 -~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA 634 (700)
++..++++|.|+. .+.+.+++++++++ +.+.|.| .++.+++..+++. +|++|+||.+|+||++++||||
T Consensus 283 ~~~~~l~i~G~g~~---~~~~~l~~~~~~~~--~~~~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma 352 (439)
T 3fro_A 283 FQEMRFIIIGKGDP---ELEGWARSLEEKHG--NVKVITE----MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMC 352 (439)
T ss_dssp GGGEEEEEECCCCH---HHHHHHHHHHHHCT--TEEEECS----CCCHHHHHHHHTT-CSEEEECBSCCSSCHHHHHHHH
T ss_pred CCCeEEEEEcCCCh---hHHHHHHHHHhhcC--CEEEEcC----CCCHHHHHHHHHH-CCEEEeCCCCCCccHHHHHHHH
Confidence 6778888887754 34467888888888 7788998 6677999999997 9999999999999999999999
Q ss_pred cCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHH
Q 005365 635 CGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA-DPSYWDKISLGGLKRIE 698 (700)
Q Consensus 635 ~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~-dp~~~~~ms~~ar~ra~ 698 (700)
||+|||+|+.||..|++.++ +|++++++|+++++++|.+++ + |++.+++|+++|+++++
T Consensus 353 ~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll----~~~~~~~~~~~~~~~~~~~ 412 (439)
T 3fro_A 353 LGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL----ELSRSDLSKFRENCKKRAM 412 (439)
T ss_dssp TTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH----HHTTTTTHHHHHHHHHHHH
T ss_pred CCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999888 999999999999999999998 6 89999999999999874
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=2.1e-34 Score=328.65 Aligned_cols=278 Identities=17% Similarity=0.239 Sum_probs=197.6
Q ss_pred CCCeEEEEcCCCchHHHHHHHHhc-------CCcEEEEecCCccccCC------CCchhhh---h--ccccc---chhhh
Q 005365 404 GKPDLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYP------DSDIYWK---N--LDDKY---HFSCQ 462 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~~~-------giP~V~t~H~l~~~~~~------~~~~~w~---~--~~~~y---~~~~~ 462 (700)
+++||+|+|.|.+++++.++.... ++|+|+|+|++...... .....+. . ....+ .....
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 357899999999999888776543 68999999987543210 0000000 0 00000 01112
Q ss_pred hhHHHHHHhhCCEEEecCHHHHHhhhhhhccc-cccccccCCCeEEeecCCCCC--CCcc--ee----------------
Q 005365 463 FTADLIAMNHTDFIITSTFQEIAGSKDTVGQY-ESHTAFTLPGLYRVVHGIDVF--DPKF--NI---------------- 521 (700)
Q Consensus 463 ~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y-~~~~~~~~p~l~~v~nGId~~--~~k~--~v---------------- 521 (700)
+..++..+..||.|+|+|+..++.+...++.- +.........+..|+||||.. .+.. .+
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~ 311 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALN 311 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHH
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHH
Confidence 23466789999999999988776554433211 111112234688899999842 1110 00
Q ss_pred -----------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcE
Q 005365 522 -----------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQF 590 (700)
Q Consensus 522 -----------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V 590 (700)
+.+.....+|+||+.++||++.+++|++.+... +.+++++|.|+.+.. ..++..... +.++|
T Consensus 312 k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~~~~~---~~~~~~~~~--~~~~v 384 (536)
T 3vue_A 312 KEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGKKKFE---KLLKSMEEK--YPGKV 384 (536)
T ss_dssp HHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBCHHHH---HHHHHHHHH--STTTE
T ss_pred HHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccCchHH---HHHHHHHhh--cCCce
Confidence 113345678999999999999999999998754 567899999887543 344444444 45789
Q ss_pred EEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEE----------EE
Q 005365 591 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY----------HI 660 (700)
Q Consensus 591 ~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~----------lv 660 (700)
.|.+ ..+.+++..+|+. +|+||+||++|+||++++|||+||+|||+|++||++|+|.||++|| ++
T Consensus 385 ~~~~----~~~~~~~~~~~~~-aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~ 459 (536)
T 3vue_A 385 RAVV----KFNAPLAHLIMAG-ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVV 459 (536)
T ss_dssp EEEC----SCCHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCC
T ss_pred EEEE----eccHHHHHHHHHh-hheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEE
Confidence 9999 5566888888886 9999999999999999999999999999999999999999999999 67
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 661 DPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
+|.|+++|+++|.++++. ..++ .|++|.++|.+
T Consensus 460 ~~~d~~~la~ai~ral~~-~~~~-~~~~~~~~am~ 492 (536)
T 3vue_A 460 EPSDVKKVAATLKRAIKV-VGTP-AYEEMVRNCMN 492 (536)
T ss_dssp CHHHHHHHHHHHHHHHHH-TTSH-HHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHh-cCcH-HHHHHHHHHHH
Confidence 888999999999988742 2444 57888887743
No 6
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=1.9e-34 Score=312.56 Aligned_cols=337 Identities=15% Similarity=0.208 Sum_probs=251.1
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
++|||+++++.+. |..||.+.++. .|++.| +||+|+ |+|...+... ....
T Consensus 3 ~~mkIl~v~~~~~---------p~~gG~~~~~~--------~l~~~L--~g~~v~----v~~~~~~~~~-------~~~~ 52 (394)
T 3okp_A 3 ASRKTLVVTNDFP---------PRIGGIQSYLR--------DFIATQ--DPESIV----VFASTQNAEE-------AHAY 52 (394)
T ss_dssp -CCCEEEEESCCT---------TSCSHHHHHHH--------HHHTTS--CGGGEE----EEEECSSHHH-------HHHH
T ss_pred CCceEEEEeCccC---------CccchHHHHHH--------HHHHHh--cCCeEE----EEECCCCccc-------hhhh
Confidence 3589999997754 44699999999 566666 699999 9886643210 0111
Q ss_pred cCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCc-EEE
Q 005365 355 YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVT-QCT 433 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP-~V~ 433 (700)
....++.+++++...... .. .+...+.+.+.+. +||+||+|..........++++.++| +|+
T Consensus 53 ~~~~~~~~~~~~~~~~~~-------------~~-~~~~~l~~~~~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 53 DKTLDYEVIRWPRSVMLP-------------TP-TTAHAMAEIIRER---EIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp HTTCSSEEEEESSSSCCS-------------CH-HHHHHHHHHHHHT---TCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred ccccceEEEEcccccccc-------------ch-hhHHHHHHHHHhc---CCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 123367888887653211 01 2233445555554 89999998866554455557778887 888
Q ss_pred EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCC
Q 005365 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (700)
Q Consensus 434 t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId 513 (700)
+.|+... .|.. .... ....+.+++.+|.|+++|....+.+++.++. -..+.+++||++
T Consensus 116 ~~h~~~~--------~~~~----~~~~--~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~--------~~~~~vi~ngv~ 173 (394)
T 3okp_A 116 STHGHEV--------GWSM----LPGS--RQSLRKIGTEVDVLTYISQYTLRRFKSAFGS--------HPTFEHLPSGVD 173 (394)
T ss_dssp ECCSTHH--------HHTT----SHHH--HHHHHHHHHHCSEEEESCHHHHHHHHHHHCS--------SSEEEECCCCBC
T ss_pred Eeccchh--------hhhh----cchh--hHHHHHHHHhCCEEEEcCHHHHHHHHHhcCC--------CCCeEEecCCcC
Confidence 9997533 1111 0111 1124567899999999998877655554431 134677889997
Q ss_pred CCCCccee--------------cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHH
Q 005365 514 VFDPKFNI--------------VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYS 579 (700)
Q Consensus 514 ~~~~k~~v--------------Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~ 579 (700)
. ..+.. ++++....+|+|+..+.||++.++++++.+....++..++++|.|.. .+.+++
T Consensus 174 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-----~~~l~~ 246 (394)
T 3okp_A 174 V--KRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRY-----ESTLRR 246 (394)
T ss_dssp T--TTSCCCCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTT-----HHHHHH
T ss_pred H--HHcCCCCchhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchH-----HHHHHH
Confidence 3 22221 13344568899999999999999999999988878888888887633 245555
Q ss_pred HHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC-------CCccHHHHHHHHcCCCEEEcCCCCcccccc
Q 005365 580 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-------EAFGLTVVEAMTCGLPTFATCKGGPAEIIV 652 (700)
Q Consensus 580 li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~-------E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~ 652 (700)
++ .++.++|.|+| .++.+++..+|+. +|++|+||.+ |+||++++|||+||+|||+|+.||..|++.
T Consensus 247 ~~--~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~ 319 (394)
T 3okp_A 247 LA--TDVSQNVKFLG----RLEYQDMINTLAA-ADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVT 319 (394)
T ss_dssp HT--GGGGGGEEEEE----SCCHHHHHHHHHH-CSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCC
T ss_pred HH--hcccCeEEEcC----CCCHHHHHHHHHh-CCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHh
Confidence 55 56778999999 6667999999997 9999999999 999999999999999999999999999999
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 653 NGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 653 dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
++ +|++++++|+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 320 ~~-~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 361 (394)
T 3okp_A 320 PA-TGLVVEGSDVDKLSELLIELL----DDPIRRAAMGAAGRAHVEA 361 (394)
T ss_dssp TT-TEEECCTTCHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHHH
T ss_pred cC-CceEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99 999999999999999999998 8999999999999998865
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=1.8e-34 Score=323.62 Aligned_cols=380 Identities=14% Similarity=0.126 Sum_probs=249.0
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCC----------
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT---------- 346 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~---------- 346 (700)
|||++++.+++|. +..||.++++. +|+++|+++||+|+ |+|...+......
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 2qzs_A 1 MQVLHVCSEMFPL-------LKTGGLADVIG--------ALPAAQIADGVDAR----VLLPAFPDIRRGVTDAQVVSRRD 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCHHHHHHCTTCEEEEEEC
T ss_pred CeEEEEeeecccc-------ccCCcHHHHHH--------HHHHHHHHcCCEEE----EEecCccccccccccceeEEEec
Confidence 7999999876642 24699999999 66667799999999 9986532110000
Q ss_pred -CccceeEec-CccceEEEEecCCCc---cc-ccc-----cccccccchhhHHHHHHHHHHHHHHHc-CCCCeEEEEcCC
Q 005365 347 -CGQRLEKVY-GTKYSDILRVPFRTE---KG-VVR-----KWISRFEVWPYLETYTEDVAVEIAKEL-QGKPDLIIGNYS 414 (700)
Q Consensus 347 -~~~~~e~i~-~~~~v~I~rvp~~~~---~~-~~~-----~~lsr~~i~~~l~~f~~~~~~~l~~~~-~~~pDlIh~h~~ 414 (700)
.....+... ..+++.+++++.... .+ ... .|. ..+..+..+...+.+.+.... ..+|||||+|.+
T Consensus 62 ~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~ 138 (485)
T 2qzs_A 62 TFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYT---DNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDW 138 (485)
T ss_dssp CTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBCTTSCBCT---THHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETG
T ss_pred ccCCcEEEEEEEECCcEEEEEeChhhccCCCCccCCcccCCCC---chHHHHHHHHHHHHHHHHHhccCCCCCEEEeecc
Confidence 000001110 013678888764210 00 000 000 000011122222333322211 148999999987
Q ss_pred CchHHHHHHH-HhcCCcEEEEecCCccccCCC-Cch-----hhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHHHh
Q 005365 415 DGNIVASLLA-HKLGVTQCTIAHALEKTKYPD-SDI-----YWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIAG 486 (700)
Q Consensus 415 ~~~lva~lla-~~~giP~V~t~H~l~~~~~~~-~~~-----~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~ 486 (700)
..++++.+++ +..++|+|++.|+........ ... .+..+. ....+......++.+++.+|.|+++|...++.
T Consensus 139 ~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 218 (485)
T 2qzs_A 139 HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE 218 (485)
T ss_dssp GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHH
T ss_pred chhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHH
Confidence 7777777777 678999999999975321100 000 000000 00001111223667899999999999877654
Q ss_pred hhhh-hccccccccc--cC--CCeEEeecCCCCCCCccee------------------------------cCC--CCccc
Q 005365 487 SKDT-VGQYESHTAF--TL--PGLYRVVHGIDVFDPKFNI------------------------------VSP--GADMS 529 (700)
Q Consensus 487 ~k~~-~~~y~~~~~~--~~--p~l~~v~nGId~~~~k~~v------------------------------Ip~--G~d~~ 529 (700)
+.+. ++.- ....+ .. ..+.+|+||++.. .+.. +++ +....
T Consensus 219 ~~~~~~~~~-~~~~~~~~~~~~~~~vi~ngvd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i 295 (485)
T 2qzs_A 219 ITEPQFAYG-MEGLLQQRHREGRLSGVLNGVDEK--IWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLF 295 (485)
T ss_dssp TTSHHHHTT-CHHHHHHHHHTTCEEECCCCCCTT--TSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEE
T ss_pred HhccccCcc-hHHHHHhhccCCceEEEecCCCcc--ccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEE
Confidence 4332 2200 00000 00 3477889999842 2211 111 34567
Q ss_pred cccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEE-EeccccCcCChhHHHHH
Q 005365 530 IYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFR-WISSQMNRVRNGELYRY 608 (700)
Q Consensus 530 ~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~-flG~~~d~v~~~el~~~ 608 (700)
+|+|++.+.||++.+++|++.+.. ++..++++|.|+. ++.+.+++++++++ ++|. |.|+ +.+++..+
T Consensus 296 ~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~---~~~~~l~~~~~~~~--~~v~~~~g~-----~~~~~~~~ 363 (485)
T 2qzs_A 296 AVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGDP---VLQEGFLAAAAEYP--GQVGVQIGY-----HEAFSHRI 363 (485)
T ss_dssp EEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEECH---HHHHHHHHHHHHST--TTEEEEESC-----CHHHHHHH
T ss_pred EEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCch---HHHHHHHHHHHhCC--CcEEEeCCC-----CHHHHHHH
Confidence 899999999999999999999876 3678888888754 24467778888875 6786 8883 45777899
Q ss_pred HHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC---------CeEEEECCCCHHHHHHHHHHHHHhc
Q 005365 609 ICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHIDPYHGEQAAEILVDFFEKC 679 (700)
Q Consensus 609 la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg---------~~G~lv~p~D~eaLAeaI~~ll~~~ 679 (700)
|+. +|++|+||.+|+||++++||||||+|||+|+.||.+|++.++ .+|++++++|++++|++|.++++ +
T Consensus 364 ~~~-adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~-~ 441 (485)
T 2qzs_A 364 MGG-ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFV-L 441 (485)
T ss_dssp HHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHH-H
T ss_pred HHh-CCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHH-H
Confidence 996 999999999999999999999999999999999999999998 89999999999999999999872 1
Q ss_pred cCCHHHHHHHHHHHHH
Q 005365 680 KADPSYWDKISLGGLK 695 (700)
Q Consensus 680 ~~dp~~~~~ms~~ar~ 695 (700)
..|++.+++|+++|++
T Consensus 442 ~~~~~~~~~~~~~~~~ 457 (485)
T 2qzs_A 442 WSRPSLWRFVQRQAMA 457 (485)
T ss_dssp HTSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh
Confidence 1589999999999864
No 8
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=1.4e-33 Score=307.63 Aligned_cols=329 Identities=18% Similarity=0.241 Sum_probs=235.0
Q ss_pred CCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecCccceEEEEecCCCccccccc
Q 005365 297 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRK 376 (700)
Q Consensus 297 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~ 376 (700)
|..||.+.++. +|+++|+++||+|+ |+|...+.... ...+++.+..++......
T Consensus 24 p~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~---- 77 (394)
T 2jjm_A 24 PSVGGSGVVGT--------ELGKQLAERGHEIH----FITSGLPFRLN----------KVYPNIYFHEVTVNQYSV---- 77 (394)
T ss_dssp C--CHHHHHHH--------HHHHHHHHTTCEEE----EECSSCC--------------CCCTTEEEECCCCC--------
T ss_pred CCCCCHHHHHH--------HHHHHHHhCCCEEE----EEeCCCCCccc----------ccCCceEEEecccccccc----
Confidence 44699999999 66667799999999 99865321100 111245666555432210
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchH-HHHHHHHhc--CCcEEEEecCCccccCCCCchhhhhc
Q 005365 377 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI-VASLLAHKL--GVTQCTIAHALEKTKYPDSDIYWKNL 453 (700)
Q Consensus 377 ~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~l-va~lla~~~--giP~V~t~H~l~~~~~~~~~~~w~~~ 453 (700)
+...++...+...+.+.+.+. +||+||+|+..... .+.+.++.. ++|+|++.|+........
T Consensus 78 ----~~~~~~~~~~~~~l~~~l~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-------- 142 (394)
T 2jjm_A 78 ----FQYPPYDLALASKMAEVAQRE---NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS-------- 142 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHHH---TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT--------
T ss_pred ----cccccccHHHHHHHHHHHHHc---CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCC--------
Confidence 111112223344455566665 89999999765443 344334443 599999999853321110
Q ss_pred ccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee-----------c
Q 005365 454 DDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI-----------V 522 (700)
Q Consensus 454 ~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v-----------I 522 (700)
...+ ...++.+++.+|.|+++|....+.+.+.++. .....+++||++. ..+.. +
T Consensus 143 ~~~~-----~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~--------~~~~~vi~ngv~~--~~~~~~~~~~~~~~~~~ 207 (394)
T 2jjm_A 143 DPSL-----NNLIRFGIEQSDVVTAVSHSLINETHELVKP--------NKDIQTVYNFIDE--RVYFKRDMTQLKKEYGI 207 (394)
T ss_dssp CTTT-----HHHHHHHHHHSSEEEESCHHHHHHHHHHTCC--------SSCEEECCCCCCT--TTCCCCCCHHHHHHTTC
T ss_pred CHHH-----HHHHHHHHhhCCEEEECCHHHHHHHHHhhCC--------cccEEEecCCccH--HhcCCcchHHHHHHcCC
Confidence 0000 1125567899999999998877655544331 1246788899973 22221 1
Q ss_pred CCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCCh
Q 005365 523 SPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRN 602 (700)
Q Consensus 523 p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~ 602 (700)
+++....+|+|+..+.||++.+++|++.+... .+..++++|.|.. .++++++++++++.++|.|+|+.
T Consensus 208 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~-----~~~l~~~~~~~~l~~~v~~~g~~------ 275 (394)
T 2jjm_A 208 SESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE-----FCTILQLVKNLHIEDRVLFLGKQ------ 275 (394)
T ss_dssp C---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT-----HHHHHHHHHTTTCGGGBCCCBSC------
T ss_pred CCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchH-----HHHHHHHHHHcCCCCeEEEeCch------
Confidence 13445678999999999999999999998876 4567778776632 35688889999999999999942
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|
T Consensus 276 ~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~----~~ 350 (394)
T 2jjm_A 276 DNVAELLAM-SDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL----KD 350 (394)
T ss_dssp SCTHHHHHT-CSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH----HC
T ss_pred hhHHHHHHh-CCEEEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHH----cC
Confidence 467888886 9999999999999999999999999999999999999999999999999999999999999998 79
Q ss_pred HHHHHHHHHHHHHHHH
Q 005365 683 PSYWDKISLGGLKRIE 698 (700)
Q Consensus 683 p~~~~~ms~~ar~ra~ 698 (700)
++.+++|+++|++++.
T Consensus 351 ~~~~~~~~~~~~~~~~ 366 (394)
T 2jjm_A 351 EELHRNMGERARESVY 366 (394)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999884
No 9
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=4.5e-34 Score=320.33 Aligned_cols=382 Identities=13% Similarity=0.139 Sum_probs=248.7
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCC--C--------
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT--T-------- 346 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~--~-------- 346 (700)
|||++++.+++|. +..||.+.++. +|+++|+++||+|+ |+|...+..... .
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 1rzu_A 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKAAVTDPVKCFEFT 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHHHCCSCEEEEEES
T ss_pred CeEEEEeeeeccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEecccccccccccccceeEEEE
Confidence 7999999877642 24699999999 66777799999999 998653221000 0
Q ss_pred --CccceeEe-cCccceEEEEecCCCccccccc--cccc--ccchh----hHHHHHHHHHHHHHHH-cCCCCeEEEEcCC
Q 005365 347 --CGQRLEKV-YGTKYSDILRVPFRTEKGVVRK--WISR--FEVWP----YLETYTEDVAVEIAKE-LQGKPDLIIGNYS 414 (700)
Q Consensus 347 --~~~~~e~i-~~~~~v~I~rvp~~~~~~~~~~--~lsr--~~i~~----~l~~f~~~~~~~l~~~-~~~~pDlIh~h~~ 414 (700)
.....+.. ...+++.+++++...... +. .... ..-|+ .+..|...+.+.+... ...+|||||+|.+
T Consensus 62 ~~~~~~~~~~~~~~~gv~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~ 139 (485)
T 1rzu_A 62 DLLGEKADLLEVQHERLDLLILDAPAYYE--RSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDW 139 (485)
T ss_dssp CSSSCCEEEEEEEETTEEEEEEECHHHHC--SSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHH
T ss_pred EecCCeEEEEEEEecCceEEEEeChHHhC--CCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEeccc
Confidence 00000110 011367888876431100 00 0000 00010 1112222233333211 1458999999987
Q ss_pred CchHHHHHHHHh--cCCcEEEEecCCccccC-CCCch-----hhhhcc-cccchhhhhhHHHHHHhhCCEEEecCHHHHH
Q 005365 415 DGNIVASLLAHK--LGVTQCTIAHALEKTKY-PDSDI-----YWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIA 485 (700)
Q Consensus 415 ~~~lva~lla~~--~giP~V~t~H~l~~~~~-~~~~~-----~w~~~~-~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~ 485 (700)
..++++.++++. .++|+|++.|+...... ..... .+..+. ....+......++.+++.||.|+++|...++
T Consensus 140 ~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 219 (485)
T 1rzu_A 140 QAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAE 219 (485)
T ss_dssp HHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHH
T ss_pred chhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHH
Confidence 666667767665 89999999999753221 00000 000000 0000101112366789999999999987766
Q ss_pred hhhhh-hccc-cccccccCCCeEEeecCCCCCCCccee------------------------------cCCC-Ccccccc
Q 005365 486 GSKDT-VGQY-ESHTAFTLPGLYRVVHGIDVFDPKFNI------------------------------VSPG-ADMSIYF 532 (700)
Q Consensus 486 ~~k~~-~~~y-~~~~~~~~p~l~~v~nGId~~~~k~~v------------------------------Ip~G-~d~~~F~ 532 (700)
.+.+. ++.- ..........+.+|+||++. ..+.. +++. ....+|+
T Consensus 220 ~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~v 297 (485)
T 1rzu_A 220 EILTAEFGMGLEGVIGSRAHVLHGIVNGIDA--DVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVI 297 (485)
T ss_dssp HTTSHHHHTTCHHHHHTTGGGEEECCCCBCT--TTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEE
T ss_pred HHhccccCcchHHHHHhhcCCceEEcCCCcc--cccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEE
Confidence 54432 1100 00000011347788999984 22211 1111 3367899
Q ss_pred CCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEE-EeccccCcCChhHHHHHHHc
Q 005365 533 PYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFR-WISSQMNRVRNGELYRYICD 611 (700)
Q Consensus 533 g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~-flG~~~d~v~~~el~~~la~ 611 (700)
|++.+.||++.+++|+..+.. ++..++++|.|+. .+.+.+++++++++ ++|. |.|+ +.+++..+|+.
T Consensus 298 Grl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~---~~~~~l~~~~~~~~--~~v~~~~g~-----~~~~~~~~~~~ 365 (485)
T 1rzu_A 298 SRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGDV---ALEGALLAAASRHH--GRVGVAIGY-----NEPLSHLMQAG 365 (485)
T ss_dssp SCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBCH---HHHHHHHHHHHHTT--TTEEEEESC-----CHHHHHHHHHH
T ss_pred ccCccccCHHHHHHHHHHHHh--cCceEEEEeCCch---HHHHHHHHHHHhCC--CcEEEecCC-----CHHHHHHHHhc
Confidence 999999999999999999876 3678888888754 23467778888775 6787 7873 45677899996
Q ss_pred cCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccC---------CeEEEECCCCHHHHHHHHHHHHHhccCC
Q 005365 612 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHIDPYHGEQAAEILVDFFEKCKAD 682 (700)
Q Consensus 612 ~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg---------~~G~lv~p~D~eaLAeaI~~ll~~~~~d 682 (700)
+|++|+||.+|+||++++||||||+|||+|+.||++|++.++ .+|++++++|++++|++|.++++ ...|
T Consensus 366 -adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~-~~~~ 443 (485)
T 1rzu_A 366 -CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVR-YYHD 443 (485)
T ss_dssp -CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHH-HHTC
T ss_pred -CCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHH-HhCC
Confidence 999999999999999999999999999999999999999998 89999999999999999999872 1159
Q ss_pred HHHHHHHHHHHHH
Q 005365 683 PSYWDKISLGGLK 695 (700)
Q Consensus 683 p~~~~~ms~~ar~ 695 (700)
++.+++|+++|++
T Consensus 444 ~~~~~~~~~~~~~ 456 (485)
T 1rzu_A 444 PKLWTQMQKLGMK 456 (485)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999863
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=1e-34 Score=312.83 Aligned_cols=335 Identities=14% Similarity=0.175 Sum_probs=235.1
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||+++++++.| .||.++++. +++++|+++||+|+ |+|.......
T Consensus 1 MkIl~i~~~~~~----------~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYFP----------FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC------------- 45 (374)
T ss_dssp -CEEEECSEECT----------TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------
T ss_pred CeEEEEEeecCC----------CcchhhHHH--------HHHHHHHhCCCeEE----EEecCCCCCC-------------
Confidence 799999976542 489999999 66667799999999 9986532210
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEec
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H 436 (700)
.+++.++++|...... ......+...+.+.+.+. +||+||+|....+..+...++..+++.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKEH---PADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHHS---CCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCcEEEEEccCcccc-----------hhhHHHHHHHHHHHHhcc---CCCEEEEecCCCCceeeeccccccceeeeecc
Confidence 1257788887654311 111222333444455544 89999998754332111111111222222233
Q ss_pred CCccccCCCCchhhhhcccccchhhhhhHHHHHHh--hCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCC
Q 005365 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMN--HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (700)
Q Consensus 437 ~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~--~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~ 514 (700)
+... .....+.... ..++..+. .+|.|+++|...++.+.+.++. ......+++||++.
T Consensus 112 ~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~-------~~~~~~vi~ngv~~ 171 (374)
T 2iw1_A 112 GFLY-----------RLTSRYRHYA--AFERATFEQGKSTKLMMLTDKQIADFQKHYQT-------EPERFQILPPGIYP 171 (374)
T ss_dssp CHHH-----------HTSHHHHHHH--HHHHHHHSTTCCCEEEESCHHHHHHHHHHHCC-------CGGGEEECCCCCCG
T ss_pred cchh-----------hhcHHHHHHH--HHHHHHhhccCCcEEEEcCHHHHHHHHHHhCC-------ChhheEEecCCcCH
Confidence 2110 0011111111 12444454 6999999998877655554431 11246778889873
Q ss_pred CCCcceec---------------CCCCccccccCCchhhhchhhHHHHHHHHhhc-CCCccEEEEecCChhhHHHHHHHH
Q 005365 515 FDPKFNIV---------------SPGADMSIYFPYTEEKRRLKSFHPEIEELLYS-DVENKEHLKESKDLEEQAEMKKMY 578 (700)
Q Consensus 515 ~~~k~~vI---------------p~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~-~~~~~l~i~g~Gd~ee~~~~~~l~ 578 (700)
..+... +++....+|.|+..+.||++.+++++..+... .++..++++|.|+. +.++
T Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~------~~~~ 243 (374)
T 2iw1_A 172 --DRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP------RKFE 243 (374)
T ss_dssp --GGSGGGSCTTHHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC------HHHH
T ss_pred --HhcCcccchhHHHHHHHHhCCCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH------HHHH
Confidence 222211 23445678999999999999999999988655 35677888887642 4577
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEE
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY 658 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~ 658 (700)
++++++++.++|+|+|++ +++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|+
T Consensus 244 ~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~ 316 (374)
T 2iw1_A 244 ALAEKLGVRSNVHFFSGR------NDVSELMAA-ADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGT 316 (374)
T ss_dssp HHHHHHTCGGGEEEESCC------SCHHHHHHH-CSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEE
T ss_pred HHHHHcCCCCcEEECCCc------ccHHHHHHh-cCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceE
Confidence 888899999999999942 468888886 9999999999999999999999999999999999999999999999
Q ss_pred EEC-CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 659 HID-PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 659 lv~-p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+++ |+|+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 317 ~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 317 VIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYADT 354 (374)
T ss_dssp EECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHH
Confidence 998 899999999999998 7999999999999998875
No 11
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=1.8e-33 Score=306.52 Aligned_cols=340 Identities=13% Similarity=0.175 Sum_probs=242.1
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
.++|||+++++... +..||.+.++. .++++|+++||+|+ |+|......... ....
T Consensus 18 ~~~MkIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~~~----~~~~ 72 (406)
T 2gek_A 18 GSHMRIGMVCPYSF---------DVPGGVQSHVL--------QLAEVLRDAGHEVS----VLAPASPHVKLP----DYVV 72 (406)
T ss_dssp ---CEEEEECSSCT---------TSCCHHHHHHH--------HHHHHHHHTTCEEE----EEESCCTTSCCC----TTEE
T ss_pred CCcceEEEEeccCC---------CCCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCccccCC----cccc
Confidence 45699999995432 33589999999 66667799999999 988764332111 1111
Q ss_pred ecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEE
Q 005365 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~ 433 (700)
.. + +++++|.... ..+... ...+...+.+.+.+. +||+||+|.......+..+++..++|+|+
T Consensus 73 ~~---~-~~~~~~~~~~-------~~~~~~---~~~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~ 135 (406)
T 2gek_A 73 SG---G-KAVPIPYNGS-------VARLRF---GPATHRKVKKWIAEG---DFDVLHIHEPNAPSLSMLALQAAEGPIVA 135 (406)
T ss_dssp EC---C-CCC-------------------C---CHHHHHHHHHHHHHH---CCSEEEEECCCSSSHHHHHHHHEESSEEE
T ss_pred cC---C-cEEeccccCC-------cccccc---cHHHHHHHHHHHHhc---CCCEEEECCccchHHHHHHHHhcCCCEEE
Confidence 11 1 3444443221 001111 111223445555555 89999998866655577777888999999
Q ss_pred EecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCC
Q 005365 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (700)
Q Consensus 434 t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId 513 (700)
+.|+..... ..+..+ +. .+ + ..++.+|.|+++|....+.+.+.++ .+.. +++||++
T Consensus 136 ~~h~~~~~~-----~~~~~~---~~---~~--~-~~~~~~d~ii~~s~~~~~~~~~~~~---------~~~~-vi~~~v~ 191 (406)
T 2gek_A 136 TFHTSTTKS-----LTLSVF---QG---IL--R-PYHEKIIGRIAVSDLARRWQMEALG---------SDAV-EIPNGVD 191 (406)
T ss_dssp EECCCCCSH-----HHHHHH---HS---TT--H-HHHTTCSEEEESSHHHHHHHHHHHS---------SCEE-ECCCCBC
T ss_pred EEcCcchhh-----hhHHHH---HH---HH--H-HHHhhCCEEEECCHHHHHHHHHhcC---------CCcE-EecCCCC
Confidence 999853221 111111 11 11 2 5689999999999877665544332 2345 7788887
Q ss_pred CCCCcce------ecCCCCccccccCCc-hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCC
Q 005365 514 VFDPKFN------IVSPGADMSIYFPYT-EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKL 586 (700)
Q Consensus 514 ~~~~k~~------vIp~G~d~~~F~g~~-~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L 586 (700)
. ..+. -.+.+....+|+|+. .+.||++.+++++..+....++..++++|.|+. +.++++++++
T Consensus 192 ~--~~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~------~~l~~~~~~~-- 261 (406)
T 2gek_A 192 V--ASFADAPLLDGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE------DELREQAGDL-- 261 (406)
T ss_dssp H--HHHHTCCCCTTCSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH------HHHHHHTGGG--
T ss_pred h--hhcCCCchhhhccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH------HHHHHHHHhc--
Confidence 3 1111 112233567899999 999999999999999988777888888887743 4566666665
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC-CCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCH
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG 665 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~-~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~ 665 (700)
.++|.|+| .+++.++..+|+. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+
T Consensus 262 ~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~ 336 (406)
T 2gek_A 262 AGHLRFLG----QVDDATKASAMRS-ADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDA 336 (406)
T ss_dssp GGGEEECC----SCCHHHHHHHHHH-SSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCH
T ss_pred cCcEEEEe----cCCHHHHHHHHHH-CCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCH
Confidence 67899999 6667899999997 999999996 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 666 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 666 eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++++++|.+++ +|++.+.+|+++|++++.
T Consensus 337 ~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~ 365 (406)
T 2gek_A 337 DGMAAALIGIL----EDDQLRAGYVARASERVH 365 (406)
T ss_dssp HHHHHHHHHHH----HCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHH----cCHHHHHHHHHHHHHHHH
Confidence 99999999998 799999999999998875
No 12
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=1.2e-32 Score=302.51 Aligned_cols=256 Identities=14% Similarity=0.140 Sum_probs=195.2
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEE-ecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFII-TSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~II-t~S~~~ 483 (700)
+||+||+|.+.....+.++++ ++|+|++.|+..... ....|. + ....+..+|.++ ++|...
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~~---~~~~~~-------~------~~~~~~~~~~~i~~~s~~~ 187 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK--KSPWLWRCHIDLSSP---NREFWE-------F------LRRFVEKYDRYIFHLPEYV 187 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC--CSCEEEECCSCCSSC---CHHHHH-------H------HHHHHTTSSEEEESSGGGS
T ss_pred CCCEEEEeccchhhHHHHHHh--cCCEEEEEccccCCc---cHHHHH-------H------HHHHHHhCCEEEEechHHH
Confidence 899999998665544433332 389999999864321 111111 1 123466778776 455221
Q ss_pred HHhhhhhhccccccccccCCCeEEeecCCCCCCCcce--------------ecCCCCccccccCCchhhhchhhHHHHHH
Q 005365 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFN--------------IVSPGADMSIYFPYTEEKRRLKSFHPEIE 549 (700)
Q Consensus 484 ~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~--------------vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~ 549 (700)
++.+ .-....+++||++....... -++++....+|.|++.+.||++.+++|+.
T Consensus 188 ----~~~~---------~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~ 254 (416)
T 2x6q_A 188 ----QPEL---------DRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYR 254 (416)
T ss_dssp ----CTTS---------CTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHH
T ss_pred ----HhhC---------CccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHH
Confidence 1111 11346788999984221100 01344556789999999999999999999
Q ss_pred HHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHH
Q 005365 550 ELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTV 629 (700)
Q Consensus 550 ~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~v 629 (700)
.+....++..++++|.|........+.++++++++++.++|+|+|+.+ .++.+++..+++. +|++|+||.+|+||+++
T Consensus 255 ~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~-~~~~~~~~~~~~~-ad~~v~ps~~E~~~~~~ 332 (416)
T 2x6q_A 255 KVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLI-GVHAREVNAFQRA-SDVILQMSIREGFGLTV 332 (416)
T ss_dssp HHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGG-TCCHHHHHHHHHH-CSEEEECCSSCSSCHHH
T ss_pred HHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccC-CCCHHHHHHHHHh-CCEEEECCCcCCCccHH
Confidence 998888888999999885422234467788899999999999999665 3456799999997 99999999999999999
Q ss_pred HHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 630 VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 630 lEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
+||||||+|||+|+.||.+|++.++.+|++++ |+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 333 lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~ 396 (416)
T 2x6q_A 333 TEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLL----KHPEVSKEMGAKAKERVRK 396 (416)
T ss_dssp HHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 9999999999998 7999999999999998864
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.98 E-value=7.6e-32 Score=295.45 Aligned_cols=335 Identities=12% Similarity=0.096 Sum_probs=236.1
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEecC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i~~ 356 (700)
|||++++++. |..||.+.++. +|+++|+++ |+|+ |+|...... ..+. .
T Consensus 1 MkI~~v~~~~----------p~~gG~~~~~~--------~l~~~L~~~-~~V~----v~~~~~~g~--~~~~-~------ 48 (413)
T 3oy2_A 1 MKLIIVGAHS----------SVPSGYGRVMR--------AIVPRISKA-HEVI----VFGIHAFGR--SVHA-N------ 48 (413)
T ss_dssp CEEEEEEECT----------TCCSHHHHHHH--------HHHHHHTTT-SEEE----EEEESCCSC--CSCS-S------
T ss_pred CeEEEecCCC----------CCCCCHHHHHH--------HHHHHHHhc-CCeE----EEeecCCCc--cccc-c------
Confidence 8999999753 33599999999 677777999 9999 887543210 0000 0
Q ss_pred ccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCc----EE
Q 005365 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVT----QC 432 (700)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP----~V 432 (700)
.......... .++ +++... +.+ ..+.+.+.+. +||+||+|++ ....+..+++..++| .+
T Consensus 49 ---~~~~~~~~~~---~~~-~~~~~~-~~~-----~~l~~~l~~~---~~Div~~~~~-~~~~~~~~~~~~~~~~~~~~~ 111 (413)
T 3oy2_A 49 ---IEEFDAQTAE---HVR-GLNEQG-FYY-----SGLSEFIDVH---KPDIVMIYND-PIVIGNYLLAMGKCSHRTKIV 111 (413)
T ss_dssp ---SEEEEHHHHH---HHT-TCCSTT-CCH-----HHHHHHHHHH---CCSEEEEEEC-HHHHHHHHHHGGGCCSCCEEE
T ss_pred ---cccCCccccc---ccc-cccccc-chH-----HHHHHHHHhc---CCCEEEEcch-HHHHHHHHHHhccCCCCCcee
Confidence 0100000000 000 011000 001 1234445555 8999999944 445566666666655 34
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCC--EEEecCHHHHHhhhhhhccccccccccCCCeEEeec
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD--FIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH 510 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD--~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n 510 (700)
...|...... ... . +..++.+| .|+++|....+.+.+ ++ . -....+++|
T Consensus 112 ~~~~~~~~~~--------~~~------~------~~~~~~~~~~~ii~~S~~~~~~~~~-~~-------~-~~~~~vi~n 162 (413)
T 3oy2_A 112 LYVDLVSKNI--------REN------L------WWIFSHPKVVGVMAMSKCWISDICN-YG-------C-KVPINIVSH 162 (413)
T ss_dssp EEECCCSBSC--------CGG------G------GGGGGCTTEEEEEESSTHHHHHHHH-TT-------C-CSCEEECCC
T ss_pred eeccccchhh--------HHH------H------HHHHhccCCceEEEcCHHHHHHHHH-cC-------C-CCceEEeCC
Confidence 4455332111 000 1 13477888 999999777655444 22 1 134778889
Q ss_pred CCCCCCC-cce---ecCC--CCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhH-HHHHHHHHHHHH
Q 005365 511 GIDVFDP-KFN---IVSP--GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQ-AEMKKMYSLIDQ 583 (700)
Q Consensus 511 GId~~~~-k~~---vIp~--G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~-~~~~~l~~li~~ 583 (700)
|++.... ... -+++ .....+|+|+..+.||++.+++|+..+....++..++++|.|..+.. ...+.+++++++
T Consensus 163 gvd~~~~~~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~ 242 (413)
T 3oy2_A 163 FVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVA 242 (413)
T ss_dssp CCCCCCCTTHHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHH
Confidence 9984211 110 0122 34567899999999999999999999988888999999998864321 123577888999
Q ss_pred cCCCCc-------EEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCe
Q 005365 584 YKLNGQ-------FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKS 656 (700)
Q Consensus 584 l~L~~~-------V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~ 656 (700)
+++.++ |.|.| .++.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||.+|++.++.+
T Consensus 243 ~~l~~~v~~l~~vv~~~g----~~~~~~~~~~~~~-adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~ 317 (413)
T 3oy2_A 243 SGVDNVFTHLNKIMINRT----VLTDERVDMMYNA-CDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCV 317 (413)
T ss_dssp HTCSCHHHHHTTEEEECS----CCCHHHHHHHHHH-CSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTS
T ss_pred cCcccccccccceeeccC----cCCHHHHHHHHHh-CCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcc
Confidence 999987 88888 6677999999997 99999999999999999999999999999999999999999887
Q ss_pred ---------------EE--EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 657 ---------------GY--HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 657 ---------------G~--lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
|+ +++++|+++++++| +++ +|++.+++|+++|++++.+
T Consensus 318 ~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~----~~~~~~~~~~~~a~~~~~~ 372 (413)
T 3oy2_A 318 YKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFF----KDEKNRKEYGKRVQDFVKT 372 (413)
T ss_dssp EEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHT----TSHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccCcceeeCCCCHHHHHHHH-HHh----cCHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999 998 8999999999999999864
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.98 E-value=9.4e-32 Score=287.50 Aligned_cols=281 Identities=12% Similarity=0.059 Sum_probs=208.2
Q ss_pred ceEEEEEccc--------cccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCC
Q 005365 276 VFNVVILTPH--------GYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTC 347 (700)
Q Consensus 276 ~mkI~iis~h--------~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~ 347 (700)
+|||++++++ .+|.+. ...||.+.++. +++++|+++||+|+ |+|.......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p-----~~~gG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~~---- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPP-----QGYGGIQWVVA--------NLMDGLLELGHEVF----LLGAPGSPAG---- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSC-----SSSCHHHHHHH--------HHHHHHHHTTCEEE----EESCTTSCCC----
T ss_pred ccEEEEEeccccccCcccccccCc-----ccCChHHHHHH--------HHHHHHHHcCCeEE----EEecCCCCCC----
Confidence 3899999987 332110 13599999999 66667799999999 9886533211
Q ss_pred ccceeEecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhc
Q 005365 348 GQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL 427 (700)
Q Consensus 348 ~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~ 427 (700)
.+++.+++. .. +. .+.+.+.+. +||+||+|.......+ ++..
T Consensus 62 ---------~~~~~~~~~--~~--------------~~-------~l~~~l~~~---~~Dvi~~~~~~~~~~~---~~~~ 103 (342)
T 2iuy_A 62 ---------RPGLTVVPA--GE--------------PE-------EIERWLRTA---DVDVVHDHSGGVIGPA---GLPP 103 (342)
T ss_dssp ---------STTEEECSC--CS--------------HH-------HHHHHHHHC---CCSEEEECSSSSSCST---TCCT
T ss_pred ---------CCcceeccC--Cc--------------HH-------HHHHHHHhc---CCCEEEECCchhhHHH---Hhhc
Confidence 013333221 10 00 234444443 8999999886654332 5667
Q ss_pred CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEE
Q 005365 428 GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYR 507 (700)
Q Consensus 428 giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~ 507 (700)
++| |++.|+...... .+|.|+++|...++.+.+ .....+
T Consensus 104 ~~p-v~~~h~~~~~~~----------------------------~~d~ii~~S~~~~~~~~~------------~~~~~v 142 (342)
T 2iuy_A 104 GTA-FISSHHFTTRPV----------------------------NPVGCTYSSRAQRAHCGG------------GDDAPV 142 (342)
T ss_dssp TCE-EEEEECSSSBCS----------------------------CCTTEEESCHHHHHHTTC------------CTTSCB
T ss_pred CCC-EEEecCCCCCcc----------------------------cceEEEEcCHHHHHHHhc------------CCceEE
Confidence 899 999998743210 189999999776553322 134567
Q ss_pred eecCCCCCCCcceecC---CCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc
Q 005365 508 VVHGIDVFDPKFNIVS---PGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY 584 (700)
Q Consensus 508 v~nGId~~~~k~~vIp---~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l 584 (700)
++||++. ..+...+ +.....+|+|++.+.||++.++++++.+ +..++++|.|+. . +.++++++++
T Consensus 143 i~ngvd~--~~~~~~~~~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~g~~--~---~~l~~~~~~~ 210 (342)
T 2iuy_A 143 IPIPVDP--ARYRSAADQVAKEDFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGPAWE--P---EYFDEITRRY 210 (342)
T ss_dssp CCCCBCG--GGSCCSTTCCCCCSCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESCCCC--H---HHHHHHHHHH
T ss_pred EcCCCCh--hhcCcccccCCCCCEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeCccc--H---HHHHHHHHHh
Confidence 8889873 2222211 2345688999999999999999999887 577888887742 2 4556677777
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC----------CCCccHHHHHHHHcCCCEEEcCCCCccccccc-
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL----------YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN- 653 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~----------~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d- 653 (700)
+ ++|+|+| .+++.++..+|+. +|++|+||. .|+||++++|||+||+|||+|+.||..|++++
T Consensus 211 ~--~~v~~~g----~~~~~~l~~~~~~-adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~ 283 (342)
T 2iuy_A 211 G--STVEPIG----EVGGERRLDLLAS-AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSV 283 (342)
T ss_dssp T--TTEEECC----CCCHHHHHHHHHH-CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGG
T ss_pred C--CCEEEec----cCCHHHHHHHHHh-CCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhccc
Confidence 6 7899999 6667899999997 999999999 89999999999999999999999999999999
Q ss_pred -CCeEEEECCCCHHHHHHHHHHHH
Q 005365 654 -GKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 654 -g~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+.+|+++++ |+++++++|.+++
T Consensus 284 ~~~~g~~~~~-d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 284 GEVVGYGTDF-APDEARRTLAGLP 306 (342)
T ss_dssp EEECCSSSCC-CHHHHHHHHHTSC
T ss_pred CCCceEEcCC-CHHHHHHHHHHHH
Confidence 999999999 9999999999886
No 15
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.96 E-value=7.5e-29 Score=274.13 Aligned_cols=327 Identities=11% Similarity=0.030 Sum_probs=207.0
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
+..|||+++++++.|+ ...||.. .+. +|+++|+++||+|+ |+|+..... ......
T Consensus 44 ~~~mrI~~v~~~~~p~-------~~~GG~~-~v~--------~la~~L~~~GheV~----Vvt~~~~~~-----~~~~~~ 98 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQE-------HMFGGIS-TAL--------KLFEQFDNKKFKKR----IILTDATPN-----PKDLQS 98 (413)
T ss_dssp CCSCEEEEEESCCCGG-------GCSHHHH-HHH--------HHHTTSCTTTCEEE----EEESSCCCC-----HHHHGG
T ss_pred CCCceEEEEeCCCCcc-------ccccHHH-HHH--------HHHHHHHHcCCceE----EEEecCCCC-----hHHHHh
Confidence 4469999999987753 1246664 467 67778899999999 999763210 000000
Q ss_pred ecCccceEEEEecCCCcccccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHH----h---
Q 005365 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH----K--- 426 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~----~--- 426 (700)
+ ...... +......+.. .+..+... ....+ . ..+||+||++.+.+...+..+.+ .
T Consensus 99 ~---~~~~~~--~~~~~~~~~~------~i~~~~~~----~~~~~-~--~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 2x0d_A 99 F---KSFKYV--MPEEDKDFAL------QIVPFNDR----YNRTI-P--VAKHDIFIATAWWTAYAAQRIVSWQSDTYGI 160 (413)
T ss_dssp G---TTSEEC--CTTCCCCCSE------EEEECSCC----TTCCE-E--ECTTEEEEECSHHHHHHHHHHHHHHHHHHTC
T ss_pred h---hcccee--eccCCccccc------eeeecccc----ccccc-c--CCCCCEEEEehHHHHHHHHHhhhhhhhhccc
Confidence 1 011111 1111100000 00000000 00000 0 12699999988666555544421 1
Q ss_pred cCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCC--EEEecCHHHHHhhhhhhccccccccccCCC
Q 005365 427 LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD--FIITSTFQEIAGSKDTVGQYESHTAFTLPG 504 (700)
Q Consensus 427 ~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD--~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~ 504 (700)
.+.|.++.+|+.+...+.... . ...++..++.++ .+|++|...++.+++. + +..+.
T Consensus 161 ~~~~~~~~v~~~~~~~~~~~~--------~------~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~-g-------~~~~~ 218 (413)
T 2x0d_A 161 PPNKILYIIQDFEPGFYQWSS--------Q------YVLAESTYKYRGPQIAVFNSELLKQYFNNK-G-------YNFTD 218 (413)
T ss_dssp CCCCEEEEECSCGGGGSCSSH--------H------HHHHHHTTSCCSCEEEEEESHHHHHHHHHH-T-------CCCSE
T ss_pred ccCcEEEEEeechhhcCccCh--------H------HHHHHHHhccCCceEEEEcCHHHHHHHHHc-C-------CCCCc
Confidence 245778778876543221110 0 011234456555 5889997776554432 1 12234
Q ss_pred eEEeecCCCCC--CCcceecCCCCccccccCCc-hhhhchhhHHHHHHHHhhcCCC---ccEEEEecCChhhHHHHHHHH
Q 005365 505 LYRVVHGIDVF--DPKFNIVSPGADMSIYFPYT-EEKRRLKSFHPEIEELLYSDVE---NKEHLKESKDLEEQAEMKKMY 578 (700)
Q Consensus 505 l~~v~nGId~~--~~k~~vIp~G~d~~~F~g~~-~~~Kgl~~Ll~Ai~~Ll~~~~~---~~l~i~g~Gd~ee~~~~~~l~ 578 (700)
...++||++.. ..+. ...+.....+|.|+. .+.||++.+++|++.+....++ ..++++|.|...
T Consensus 219 ~~~i~~g~d~~~~~~~~-~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~--------- 288 (413)
T 2x0d_A 219 EYFFQPKINTTLKNYIN-DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD--------- 288 (413)
T ss_dssp EEEECCCCCHHHHTTTT-SCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC---------
T ss_pred eEEeCCCcCchhhcccc-cccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh---------
Confidence 66778888621 1110 112233456788886 6889999999999999876664 567777765431
Q ss_pred HHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEE
Q 005365 579 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY 658 (700)
Q Consensus 579 ~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~ 658 (700)
.++++.++|+|+| .++.+++..+|+. ||+||+||.+|+||++++||||||+|||++ .||..|++.+|.+|+
T Consensus 289 ---~~l~~~~~v~f~G----~~~~~~l~~~~~~-adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~ 359 (413)
T 2x0d_A 289 ---IALGKGIHLNSLG----KLTLEDYADLLKR-SSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIV 359 (413)
T ss_dssp ---EEEETTEEEEEEE----SCCHHHHHHHHHH-CCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEE
T ss_pred ---hhcCCcCcEEEcC----CCCHHHHHHHHHh-CCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEE
Confidence 2467778999999 6667999999997 999999999999999999999999999995 466789999999999
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 005365 659 HIDPYHGEQAAEILVDFFEKCKADPSYWDK 688 (700)
Q Consensus 659 lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ 688 (700)
+++|+|++++|++|.+++ +|++.+++
T Consensus 360 lv~~~d~~~la~ai~~ll----~~~~~~~~ 385 (413)
T 2x0d_A 360 SLEQLNPENIAETLVELC----MSFNNRDV 385 (413)
T ss_dssp EESSCSHHHHHHHHHHHH----HHTC----
T ss_pred EeCCCCHHHHHHHHHHHH----cCHHHHHH
Confidence 999999999999999998 67777666
No 16
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.94 E-value=1e-25 Score=242.23 Aligned_cols=312 Identities=12% Similarity=0.036 Sum_probs=208.5
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
|.|||++++. + +||.+..+. .|+++|+++||+|+ ++|...+.. . +.+
T Consensus 5 m~mkIl~~~~-~------------~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~-----~---~~~ 51 (364)
T 1f0k_A 5 QGKRLMVMAG-G------------TGGHVFPGL--------AVAHHLMAQGWQVR----WLGTADRME-----A---DLV 51 (364)
T ss_dssp --CEEEEECC-S------------SHHHHHHHH--------HHHHHHHTTTCEEE----EEECTTSTH-----H---HHG
T ss_pred CCcEEEEEeC-C------------CccchhHHH--------HHHHHHHHcCCEEE----EEecCCcch-----h---hhc
Confidence 4489999972 1 378888887 67777799999999 988643210 0 001
Q ss_pred cCccceEEEEecCCCccc--ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEE
Q 005365 355 YGTKYSDILRVPFRTEKG--VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~--~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V 432 (700)
. ..++.+++++.....+ .... + ...+. .......+.+.+.+. +||+||+|....+..+..+++..++|+|
T Consensus 52 ~-~~g~~~~~~~~~~~~~~~~~~~-~--~~~~~-~~~~~~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~p~v 123 (364)
T 1f0k_A 52 P-KHGIEIDFIRISGLRGKGIKAL-I--AAPLR-IFNAWRQARAIMKAY---KPDVVLGMGGYVSGPGGLAAWSLGIPVV 123 (364)
T ss_dssp G-GGTCEEEECCCCCCTTCCHHHH-H--TCHHH-HHHHHHHHHHHHHHH---CCSEEEECSSTTHHHHHHHHHHTTCCEE
T ss_pred c-ccCCceEEecCCccCcCccHHH-H--HHHHH-HHHHHHHHHHHHHhc---CCCEEEEeCCcCchHHHHHHHHcCCCEE
Confidence 1 1256677666543211 0000 0 00111 111233445555555 8999999886666667778888999999
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
++.|+.... + .++...+.+|.+++++... .|....++||+
T Consensus 124 ~~~~~~~~~--------~--------------~~~~~~~~~d~v~~~~~~~------------------~~~~~~i~n~v 163 (364)
T 1f0k_A 124 LHEQNGIAG--------L--------------TNKWLAKIATKVMQAFPGA------------------FPNAEVVGNPV 163 (364)
T ss_dssp EEECSSSCC--------H--------------HHHHHTTTCSEEEESSTTS------------------SSSCEECCCCC
T ss_pred EEecCCCCc--------H--------------HHHHHHHhCCEEEecChhh------------------cCCceEeCCcc
Confidence 999975210 0 0234567799999987321 12455677887
Q ss_pred CCCCCccee--------cCCCCcccc-ccCCchhhhchhhHHHHHHHHhhcCCCcc-EEEEecCChhhHHHHHHHHHHHH
Q 005365 513 DVFDPKFNI--------VSPGADMSI-YFPYTEEKRRLKSFHPEIEELLYSDVENK-EHLKESKDLEEQAEMKKMYSLID 582 (700)
Q Consensus 513 d~~~~k~~v--------Ip~G~d~~~-F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~-l~i~g~Gd~ee~~~~~~l~~li~ 582 (700)
+. ..+.. ++++....+ +.|+..+.|+.+.++++++.+.. +.. ++++|.|+ . +++.++++
T Consensus 164 ~~--~~~~~~~~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l~i~G~~~--~----~~l~~~~~ 232 (364)
T 1f0k_A 164 RT--DVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIWHQSGKGS--Q----QSVEQAYA 232 (364)
T ss_dssp CH--HHHTSCCHHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEEEECCTTC--H----HHHHHHHH
T ss_pred ch--hhcccchhhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEEEEcCCch--H----HHHHHHHh
Confidence 62 11100 122222233 45688889999999999998854 344 33444443 1 46777888
Q ss_pred HcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcc--------cccccC
Q 005365 583 QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA--------EIIVNG 654 (700)
Q Consensus 583 ~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~--------EiI~dg 654 (700)
+++++ +|+|+|++ +++..+|+. +|++|+||. |++++|||+||+|||+|+.+|.. +++++|
T Consensus 233 ~~~~~-~v~~~g~~------~~~~~~~~~-ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g 300 (364)
T 1f0k_A 233 EAGQP-QHKVTEFI------DDMAAAYAW-ADVVVCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG 300 (364)
T ss_dssp HTTCT-TSEEESCC------SCHHHHHHH-CSEEEECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT
T ss_pred hcCCC-ceEEecch------hhHHHHHHh-CCEEEECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC
Confidence 88875 69999955 457888886 999999983 99999999999999999999864 466666
Q ss_pred CeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 655 KSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 655 ~~G~lv~p~D--~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
.|++++++| +++++++|.++ |++.+++|+++|++++
T Consensus 301 -~g~~~~~~d~~~~~la~~i~~l------~~~~~~~~~~~~~~~~ 338 (364)
T 1f0k_A 301 -AAKIIEQPQLSVDAVANTLAGW------SRETLLTMAERARAAS 338 (364)
T ss_dssp -SEEECCGGGCCHHHHHHHHHTC------CHHHHHHHHHHHHHTC
T ss_pred -cEEEeccccCCHHHHHHHHHhc------CHHHHHHHHHHHHHhh
Confidence 499999988 99999998653 8999999999998764
No 17
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.94 E-value=1.1e-26 Score=256.07 Aligned_cols=216 Identities=11% Similarity=0.015 Sum_probs=158.1
Q ss_pred CCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~ 484 (700)
++|+||.+...... ...+++..++|++++.|+..... .+. ..... ...++.+++.||.|+++|...+
T Consensus 124 ~~DvIh~~~~~~~~-~~~~~~~~~~p~v~~~h~~~~~~------~~~----~~~~~--~~~~~~~~~~ad~vi~~S~~~~ 190 (406)
T 2hy7_A 124 ESDVIVFESGIAVA-FIELAKRVNPAAKLVYRASDGLS------TIN----VASYI--EREFDRVAPTLDVIALVSPAMA 190 (406)
T ss_dssp HCSEEEEESSGGGG-GHHHHHHHCTTSEEEEEESSCHH------HHT----CCHHH--HHHHHHHGGGCSEEEESCGGGG
T ss_pred CCCEEEECCchHHH-HHHHHHHhCCCEEEEEeccchhh------ccc----ccHHH--HHHHHHHHHhCCEEEEcCHHHH
Confidence 58999954332222 12456778999999999753211 000 01111 1236678999999999995543
Q ss_pred HhhhhhhccccccccccCCCeEEeecCCCCCCCcceec---CC-CCccccccCCchhhhchhhHHHHHHHHhhcCCCccE
Q 005365 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV---SP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (700)
Q Consensus 485 ~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vI---p~-G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l 560 (700)
+.+..+. .+.+++||+|. ..+... +. +....+|+|++.+.||+ ++.+....++..+
T Consensus 191 ----~~~~~~~--------~i~vipngvd~--~~f~~~~~~~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~l 250 (406)
T 2hy7_A 191 ----AEVVSRD--------NVFHVGHGVDH--NLDQLGDPSPYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVTF 250 (406)
T ss_dssp ----GGCSCST--------TEEECCCCBCT--THHHHHCSCSCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEEE
T ss_pred ----HHHHhcC--------CEEEEcCCcCh--HhcCcccccccCCCcEEEEEeccccccCH------HHHHHHhCCCeEE
Confidence 3333221 57788999983 333211 11 22467899999999998 3444444567788
Q ss_pred EEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHH-------
Q 005365 561 HLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAM------- 633 (700)
Q Consensus 561 ~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAM------- 633 (700)
+++|.|+ ++++++.++|+|+| .++.+++..+|+. +|++|+||..|+||++++|||
T Consensus 251 ~ivG~g~-------------~~~~~l~~~V~f~G----~~~~~~l~~~~~~-adv~v~ps~~E~~~~~~lEAm~Kl~eYl 312 (406)
T 2hy7_A 251 HVIGSGM-------------GRHPGYGDNVIVYG----EMKHAQTIGYIKH-ARFGIAPYASEQVPVYLADSSMKLLQYD 312 (406)
T ss_dssp EEESCSS-------------CCCTTCCTTEEEEC----CCCHHHHHHHHHT-CSEEECCBSCSCCCTTHHHHCHHHHHHH
T ss_pred EEEeCch-------------HHhcCCCCCEEEcC----CCCHHHHHHHHHh-cCEEEECCCcccCchHHHHHHHHHHHHh
Confidence 8887663 45678889999999 6667899999997 999999999999999999999
Q ss_pred HcCCCEEEcCCCCcccccccCCeEEE-ECCCCHHHHHHHHHHHHH
Q 005365 634 TCGLPTFATCKGGPAEIIVNGKSGYH-IDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 634 A~GlPVVAT~~GG~~EiI~dg~~G~l-v~p~D~eaLAeaI~~ll~ 677 (700)
|||+|||+|+. +.++.+|++ ++++|++++|++|.++++
T Consensus 313 a~G~PVIas~~------v~~~~~G~l~v~~~d~~~la~ai~~ll~ 351 (406)
T 2hy7_A 313 FFGLPAVCPNA------VVGPYKSRFGYTPGNADSVIAAITQALE 351 (406)
T ss_dssp HHTCCEEEEGG------GTCSCSSEEEECTTCHHHHHHHHHHHHH
T ss_pred hCCCcEEEehh------cccCcceEEEeCCCCHHHHHHHHHHHHh
Confidence 99999999988 677889999 999999999999999983
No 18
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.92 E-value=8.9e-24 Score=227.80 Aligned_cols=259 Identities=12% Similarity=0.100 Sum_probs=173.8
Q ss_pred HHHHHHHHHHcCCCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al 470 (700)
..+.+.+.+. +||+||+|.. ..++.+.++++..++|++++.|+..... .|.. +..+ ...+...
T Consensus 85 ~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~~~------~~~~------~~~~-~~~~~~~ 148 (375)
T 3beo_A 85 EGLDKVMKEA---KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRTWD------KYSP------YPEE-MNRQLTG 148 (375)
T ss_dssp HHHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCCSC------TTSS------TTHH-HHHHHHH
T ss_pred HHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc------ccCC------ChhH-hhhhHHh
Confidence 3455556665 8999999865 3455666778889999998877652100 1100 0000 1122334
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecC-CCCCC------Cc--ce-ecCCCCccccccCCchhh-h
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG-IDVFD------PK--FN-IVSPGADMSIYFPYTEEK-R 539 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nG-Id~~~------~k--~~-vIp~G~d~~~F~g~~~~~-K 539 (700)
+.+|.++++|....+.+.+. + +....+.+++|| +|... .+ +. -.++..-..++.|+..+. |
T Consensus 149 ~~~d~ii~~s~~~~~~~~~~-g-------~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~K 220 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQKE-N-------KDESRIFITGNTAIDALKTTVKETYSHPVLEKLGNNRLVLMTAHRRENLGE 220 (375)
T ss_dssp HHCSEEEESSHHHHHHHHHT-T-------CCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTTTTSEEEEEECCCGGGTTH
T ss_pred hhhheeeCCCHHHHHHHHHc-C-------CCcccEEEECChhHhhhhhhhhhhhhHHHHHhccCCCeEEEEecccccchh
Confidence 55999999997776544321 1 111235667777 54210 00 00 001111134577888775 9
Q ss_pred chhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC
Q 005365 540 RLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP 619 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P 619 (700)
|++.+++|+..+....++..+++ +.|. +....+.+++++ +..++|+|+| .+...++..+|+. +|++|+|
T Consensus 221 ~~~~li~a~~~l~~~~~~~~~i~-~~g~--~~~~~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~~ 289 (375)
T 3beo_A 221 PMRNMFRAIKRLVDKHEDVQVVY-PVHM--NPVVRETANDIL---GDYGRIHLIE----PLDVIDFHNVAAR-SYLMLTD 289 (375)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEE-ECCS--CHHHHHHHHHHH---TTCTTEEEEC----CCCHHHHHHHHHT-CSEEEEC
T ss_pred HHHHHHHHHHHHHhhCCCeEEEE-eCCC--CHHHHHHHHHHh---hccCCEEEeC----CCCHHHHHHHHHh-CcEEEEC
Confidence 99999999999887666665443 4332 212223333332 3346899998 5556789999997 9999999
Q ss_pred CCCCCccHHHHHHHHcCCCEEEcC-CCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 620 ALYEAFGLTVVEAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 620 S~~E~fGl~vlEAMA~GlPVVAT~-~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
| |.+++|||+||+|||+|+ .||.+|++++| +|+++++ |+++++++|.+++ +|++.+++|+++|+++
T Consensus 290 s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll----~~~~~~~~~~~~~~~~ 356 (375)
T 3beo_A 290 S-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-DEETIFSLADELL----SDKEAHDKMSKASNPY 356 (375)
T ss_dssp C-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-CHHHHHHHHHHHH----HCHHHHHHHCCCCCTT
T ss_pred C-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-CHHHHHHHHHHHH----hChHhHhhhhhcCCCC
Confidence 8 778999999999999996 59999999988 9999987 9999999999998 7999999998877544
No 19
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.91 E-value=4.9e-23 Score=235.33 Aligned_cols=145 Identities=10% Similarity=0.071 Sum_probs=129.7
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC-CcEEEeccccCcCChhHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~-~~V~flG~~~d~v~~~el~ 606 (700)
..+|.|+..+ ||++.+++++..+....++..++++|. +++ ..+.++++++++|+. ++|+|+| .++.+++.
T Consensus 378 ~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~-~g~---~~~~l~~~~~~~~l~~~~v~~~g----~~~~~~~~ 448 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSG-PGE---ADARLRAFAHAQGVDAQRLVFMP----KLPHPQYL 448 (568)
T ss_dssp CEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECC-STT---HHHHHHHHHHHTTCCGGGEEEEC----CCCHHHHH
T ss_pred EEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecC-CHH---HHHHHHHHHHHcCCChhHEEeeC----CCCHHHHH
Confidence 4568899999 999999999999988888888888873 332 346788899999998 9999999 55668999
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEE-------cCCC-------CcccccccCCeEEEECCCCHHHHHHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA-------TCKG-------GPAEIIVNGKSGYHIDPYHGEQAAEIL 672 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVA-------T~~G-------G~~EiI~dg~~G~lv~p~D~eaLAeaI 672 (700)
.+|+. +|+||+||.+ +||++++|||+||+|||+ |+.| |..|+|.+ |+++++++|
T Consensus 449 ~~~~~-adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~----------~~~~la~~i 516 (568)
T 2vsy_A 449 ARYRH-ADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA----------DDAAFVAKA 516 (568)
T ss_dssp HHGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS----------SHHHHHHHH
T ss_pred HHHhc-CCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC----------CHHHHHHHH
Confidence 99997 9999999999 999999999999999999 9999 99999865 899999999
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 673 VDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 673 ~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
..++ +|++.+++|++++++++
T Consensus 517 ~~l~----~~~~~~~~~~~~~~~~~ 537 (568)
T 2vsy_A 517 VALA----SDPAALTALHARVDVLR 537 (568)
T ss_dssp HHHH----HCHHHHHHHHHHHHHHH
T ss_pred HHHh----cCHHHHHHHHHHHHHhh
Confidence 9998 79999999999999987
No 20
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.91 E-value=3.1e-23 Score=224.56 Aligned_cols=259 Identities=10% Similarity=0.074 Sum_probs=175.5
Q ss_pred HHHHHHHHHHcCCCCeEEEEcCC-CchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHH
Q 005365 392 EDVAVEIAKELQGKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (700)
Q Consensus 392 ~~~~~~l~~~~~~~pDlIh~h~~-~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al 470 (700)
..+.+.+.+. +||+||+|.. ...+.+.++++..++|++++.|+..... .|... ... .......
T Consensus 76 ~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~------~~~~~------~~~-~~~~~~~ 139 (384)
T 1vgv_A 76 EGLKPILAEF---KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD------LYSPW------PEE-ANRTLTG 139 (384)
T ss_dssp HHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC------TTSST------THH-HHHHHHH
T ss_pred HHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc------ccCCC------chH-hhHHHHH
Confidence 4455566665 8999999875 5556667778888999999988763211 11100 000 0111234
Q ss_pred hhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCC--Cc-----------cee----cCCCCc-cccc
Q 005365 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFD--PK-----------FNI----VSPGAD-MSIY 531 (700)
Q Consensus 471 ~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~--~k-----------~~v----Ip~G~d-~~~F 531 (700)
+.+|.++++|....+.+.+ .+ +....+.+++||+ +... .. +.- ++++.. ..+|
T Consensus 140 ~~~d~ii~~s~~~~~~l~~-~g-------~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~ 211 (384)
T 1vgv_A 140 HLAMYHFSPTETSRQNLLR-EN-------VADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVT 211 (384)
T ss_dssp TTCSEEEESSHHHHHHHHH-TT-------CCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEE
T ss_pred hhccEEEcCcHHHHHHHHH-cC-------CChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEE
Confidence 5699999999776654332 11 1112355666763 2100 00 000 112222 3457
Q ss_pred cCCchhh-hchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH
Q 005365 532 FPYTEEK-RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 610 (700)
Q Consensus 532 ~g~~~~~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la 610 (700)
.|+..+. ||+..+++|+..+....++..+++.+ |+++ ...+.+++++. ..++|+|+| .+..+++..+|+
T Consensus 212 ~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~-g~~~--~~~~~l~~~~~---~~~~v~~~g----~~~~~~~~~~~~ 281 (384)
T 1vgv_A 212 GHRRESFGRGFEEICHALADIATTHQDIQIVYPV-HLNP--NVREPVNRILG---HVKNVILID----PQEYLPFVWLMN 281 (384)
T ss_dssp CCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEEC-CBCH--HHHHHHHHHHT---TCTTEEEEC----CCCHHHHHHHHH
T ss_pred eCCccccchHHHHHHHHHHHHHhhCCCeEEEEEc-CCCH--HHHHHHHHHhh---cCCCEEEeC----CCCHHHHHHHHH
Confidence 8888765 99999999999998766666555532 3322 12344444432 236899988 455679999999
Q ss_pred ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCC-CCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 005365 611 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 689 (700)
Q Consensus 611 ~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~-GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~m 689 (700)
. ||+||+|| |.+++|||+||+|||+|+. ||..|++++| +|+++++ |+++++++|.+++ +||+.+++|
T Consensus 282 ~-ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll----~d~~~~~~~ 349 (384)
T 1vgv_A 282 H-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLL----KDENEYQAM 349 (384)
T ss_dssp H-CSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHH----HCHHHHHHH
T ss_pred h-CcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHH----hChHHHhhh
Confidence 7 99999999 4458999999999999986 9999999988 9999988 9999999999998 799999999
Q ss_pred HHHHHHH
Q 005365 690 SLGGLKR 696 (700)
Q Consensus 690 s~~ar~r 696 (700)
+++++++
T Consensus 350 ~~~~~~~ 356 (384)
T 1vgv_A 350 SRAHNPY 356 (384)
T ss_dssp HSSCCTT
T ss_pred hhccCCC
Confidence 9877543
No 21
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.91 E-value=1.5e-23 Score=238.42 Aligned_cols=283 Identities=15% Similarity=0.150 Sum_probs=186.8
Q ss_pred CCCeEEEEcCCCchHHHHHHHH-hcCCcEEEEecCCccccC----CCCchhhhh--c-----ccccchhhhhhHHHHHHh
Q 005365 404 GKPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAHALEKTKY----PDSDIYWKN--L-----DDKYHFSCQFTADLIAMN 471 (700)
Q Consensus 404 ~~pDlIh~h~~~~~lva~lla~-~~giP~V~t~H~l~~~~~----~~~~~~w~~--~-----~~~y~~~~~~~~E~~al~ 471 (700)
.+|||+|+|.|..++++.++.+ ..++|.|+|+|+.....+ ...+.++.. + .....+...+..|+.+..
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~ 259 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAH 259 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHH
Confidence 4699999999999998888875 458999999999854333 111112210 0 000112223445888899
Q ss_pred hCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCccee----------------------cC--CCCc
Q 005365 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI----------------------VS--PGAD 527 (700)
Q Consensus 472 ~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~v----------------------Ip--~G~d 527 (700)
.||.|+|+|+..+..++..++.- +... |+||||+ .+++- .. -+.+
T Consensus 260 ~AD~ITTVS~~yA~Ei~~Ll~r~--------~d~i-IpNGID~--~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~ 328 (725)
T 3nb0_A 260 SADVFTTVSQITAFEAEHLLKRK--------PDGI-LPNGLNV--IKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFD 328 (725)
T ss_dssp HSSEEEESSHHHHHHHHHHTSSC--------CSEE-CCCCBCC--CCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSC
T ss_pred hCCEEEECCHHHHHHHHHHhcCC--------CCEE-EcCCccc--cccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCC
Confidence 99999999998887776654321 3344 9999984 22211 00 0221
Q ss_pred ----cccc-cCCch-hhhchhhHHHHHHHHhhc----CCCc---cEEEEecCChh-------------------------
Q 005365 528 ----MSIY-FPYTE-EKRRLKSFHPEIEELLYS----DVEN---KEHLKESKDLE------------------------- 569 (700)
Q Consensus 528 ----~~~F-~g~~~-~~Kgl~~Ll~Ai~~Ll~~----~~~~---~l~i~g~Gd~e------------------------- 569 (700)
..+| .||++ ..||++.+++|+.+|... ..+. .+.++.++...
T Consensus 329 ~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 408 (725)
T 3nb0_A 329 LDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTS 408 (725)
T ss_dssp GGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 2234 58998 789999999999988753 1122 22222222110
Q ss_pred -----------------------hHH------------------------------------HHHHHHHHHHHcCCCCc-
Q 005365 570 -----------------------EQA------------------------------------EMKKMYSLIDQYKLNGQ- 589 (700)
Q Consensus 570 -----------------------e~~------------------------------------~~~~l~~li~~l~L~~~- 589 (700)
+.. .-+.+...++++++.++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~ 488 (725)
T 3nb0_A 409 IGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSP 488 (725)
T ss_dssp HHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCT
T ss_pred HhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCc
Confidence 000 00122234456677665
Q ss_pred -----EEEeccccCc---CChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCC------
Q 005365 590 -----FRWISSQMNR---VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK------ 655 (700)
Q Consensus 590 -----V~flG~~~d~---v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~------ 655 (700)
|.|++.-.+. +-..++..+++. ||+||+||++|+||++++||||||+|||+|+.||.+|+|.++.
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~-advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~ 567 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRG-CHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAK 567 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHH-CSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHH
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhh-ceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCC
Confidence 6676522211 112257888886 9999999999999999999999999999999999999998863
Q ss_pred -eEEEEC---CCCHHHHHHHHHHHHHhcc-CCHHHHHHHHHHHHHHHH
Q 005365 656 -SGYHID---PYHGEQAAEILVDFFEKCK-ADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 656 -~G~lv~---p~D~eaLAeaI~~ll~~~~-~dp~~~~~ms~~ar~ra~ 698 (700)
+|++++ +.|+++++++|.+++..+. .++..+.+|+++|++++.
T Consensus 568 ~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~ 615 (725)
T 3nb0_A 568 DYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD 615 (725)
T ss_dssp HTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 699884 5677777777777665433 578889999999987654
No 22
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.90 E-value=3.1e-22 Score=225.07 Aligned_cols=270 Identities=13% Similarity=0.016 Sum_probs=181.7
Q ss_pred CCeEEEEcCCCchHHHHHHHHhc-CCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHH
Q 005365 405 KPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (700)
Q Consensus 405 ~pDlIh~h~~~~~lva~lla~~~-giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~ 483 (700)
++|+||+|.+...+++..+.++. ++|++++.|..++.. ..|..+ .+...-...+-.+|.|...+...
T Consensus 123 ~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~~-----~~~~~l-------p~~~~il~~ll~~d~i~f~~~~~ 190 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTP-----EIFNAL-------PTYDTLLEQLCDYDLLGFQTEND 190 (482)
T ss_dssp TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCH-----HHHTTS-------TTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCCCH-----HHHhhC-------ccHHHHHHhhhccCeEEEECHHH
Confidence 67999999987766776666544 799999999853221 111111 01000112345678888777654
Q ss_pred HHhhhhh----hccccc----ccccc-CCCeEEeecCCCCCCCcceec---------------CCCCccccccCCchhhh
Q 005365 484 IAGSKDT----VGQYES----HTAFT-LPGLYRVVHGIDVFDPKFNIV---------------SPGADMSIYFPYTEEKR 539 (700)
Q Consensus 484 ~~~~k~~----~~~y~~----~~~~~-~p~l~~v~nGId~~~~k~~vI---------------p~G~d~~~F~g~~~~~K 539 (700)
...+-.. ++.-.. ..... ...+.++++|||. ..|... ..+....+|++++.+.|
T Consensus 191 ~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~--~~f~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl~~~K 268 (482)
T 1uqt_A 191 RLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEP--KEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSK 268 (482)
T ss_dssp HHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCH--HHHHHHHHSCCCHHHHHHHHHTTTCEEEEEECCBCGGG
T ss_pred HHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCH--HHHHHHhcCcchHHHHHHHHHhCCCEEEEEEeCCcccC
Confidence 4332211 110000 00001 1135566778862 222110 01334567899999999
Q ss_pred chhhHHHHHHHHhhcCCC----ccEEEEecC---Chhh-HHHHHHHHHHHHHcC----CC--CcEEEe-ccccCcCChhH
Q 005365 540 RLKSFHPEIEELLYSDVE----NKEHLKESK---DLEE-QAEMKKMYSLIDQYK----LN--GQFRWI-SSQMNRVRNGE 604 (700)
Q Consensus 540 gl~~Ll~Ai~~Ll~~~~~----~~l~i~g~G---d~ee-~~~~~~l~~li~~l~----L~--~~V~fl-G~~~d~v~~~e 604 (700)
|+..+++|++.++...|+ ..++++|.+ ++++ ....+++.+++.+++ .. ..|+|+ | .++.++
T Consensus 269 gi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g----~v~~~e 344 (482)
T 1uqt_A 269 GLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQ----HFDRKL 344 (482)
T ss_dssp CHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECS----CCCHHH
T ss_pred CHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCC----CCCHHH
Confidence 999999999999887765 335666653 2332 123445556655533 22 237764 5 677899
Q ss_pred HHHHHHccCcEEEeCCCCCCccHHHHHHHHcCC-----CEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhc
Q 005365 605 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 679 (700)
Q Consensus 605 l~~~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-----PVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~ 679 (700)
+..+|+. ||+||+||..||||++++||||||+ |+|+|+.+|..+.+. +|++++|.|++++|++|.++++
T Consensus 345 l~~ly~~-ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL~-- 418 (482)
T 1uqt_A 345 LMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRALT-- 418 (482)
T ss_dssp HHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHHT--
T ss_pred HHHHHHH-ccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHHc--
Confidence 9999996 9999999999999999999999997 999999888888883 7899999999999999999982
Q ss_pred cCCHHHHHHHHHHHHHHHHh
Q 005365 680 KADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 680 ~~dp~~~~~ms~~ar~ra~e 699 (700)
.+++.++++++++++++.+
T Consensus 419 -~~~~~r~~~~~~~~~~v~~ 437 (482)
T 1uqt_A 419 -MSLAERISRHAEMLDVIVK 437 (482)
T ss_dssp -CCHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHh
Confidence 3678899999999998865
No 23
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.89 E-value=7e-23 Score=201.63 Aligned_cols=156 Identities=17% Similarity=0.164 Sum_probs=140.2
Q ss_pred cccccCCch-hhhchhhHHHHHHHHh--hcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEE-eccccCcCChh
Q 005365 528 MSIYFPYTE-EKRRLKSFHPEIEELL--YSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRW-ISSQMNRVRNG 603 (700)
Q Consensus 528 ~~~F~g~~~-~~Kgl~~Ll~Ai~~Ll--~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~f-lG~~~d~v~~~ 603 (700)
..+|.|+.. +.||++.+++++..+. ...++..++++|.++. ...+.+++++++++ +|+| +| .++.+
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~---~~~~~l~~~~~~~~---~v~~~~g----~~~~~ 107 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP---ELEGWARSLEEKHG---NVKVITE----MLSRE 107 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH---HHHHHHHHHHHHCT---TEEEECS----CCCHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCCh---HHHHHHHHHHHhcC---CEEEEec----cCCHH
Confidence 678999999 9999999999999997 6666778888887653 23467788888876 7999 99 66678
Q ss_pred HHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccC-C
Q 005365 604 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA-D 682 (700)
Q Consensus 604 el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~-d 682 (700)
++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++ ++.+|++++++|+++++++|.+++ + |
T Consensus 108 ~~~~~~~~-ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~----~~~ 181 (200)
T 2bfw_A 108 FVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDPGELANAILKAL----ELS 181 (200)
T ss_dssp HHHHHHTT-CSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHH----HCC
T ss_pred HHHHHHHH-CCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHH----hcC
Confidence 99999997 999999999999999999999999999999999999999 999999999999999999999998 7 9
Q ss_pred HHHHHHHHHHHHHHHHh
Q 005365 683 PSYWDKISLGGLKRIEE 699 (700)
Q Consensus 683 p~~~~~ms~~ar~ra~e 699 (700)
++.+++|+++|++++.+
T Consensus 182 ~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 182 RSDLSKFRENCKKRAMS 198 (200)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999864
No 24
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.87 E-value=1.1e-20 Score=204.36 Aligned_cols=255 Identities=11% Similarity=0.062 Sum_probs=162.6
Q ss_pred HHHHHHHHHcCCCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHh
Q 005365 393 DVAVEIAKELQGKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMN 471 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~ 471 (700)
.+.+.+.+. +||+||+|... ..+.+.++++..|+|++++.|+..... .+.. +.. ....+...+
T Consensus 82 ~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~------~~~~------~~~-~~~~~~~~~ 145 (376)
T 1v4v_A 82 QAARALKEM---GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGN------LKEP------FPE-EANRRLTDV 145 (376)
T ss_dssp HHHHHHHHT---TCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSC------TTSS------TTH-HHHHHHHHH
T ss_pred HHHHHHHHc---CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcccc------ccCC------Cch-HHHHHHHHH
Confidence 344455544 89999998653 445567788889999876544431110 0000 000 011234566
Q ss_pred hCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCC-----Ccce-ecCCCCccccccCCchhhhchhhH
Q 005365 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFD-----PKFN-IVSPGADMSIYFPYTEEKRRLKSF 544 (700)
Q Consensus 472 ~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~-----~k~~-vIp~G~d~~~F~g~~~~~Kgl~~L 544 (700)
.+|.++++|....+.+.+. + +....+..+.|++ +.+. ..+. -.+++....++.|+....|++..+
T Consensus 146 ~~~~~~~~s~~~~~~l~~~-g-------~~~~ki~vi~n~~~d~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~k~~~~l 217 (376)
T 1v4v_A 146 LTDLDFAPTPLAKANLLKE-G-------KREEGILVTGQTGVDAVLLAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDL 217 (376)
T ss_dssp HCSEEEESSHHHHHHHHTT-T-------CCGGGEEECCCHHHHHHHHHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHH
T ss_pred HhceeeCCCHHHHHHHHHc-C-------CCcceEEEECCchHHHHhhhhhhhHHHHhcCCCCEEEEEeCcccchHHHHHH
Confidence 7999999997765433321 1 1111233444432 2100 0000 011111123467888777899999
Q ss_pred HHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCC
Q 005365 545 HPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 624 (700)
Q Consensus 545 l~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~ 624 (700)
++|++.+....++..+++. .|+++ ...+.++++++ ..++|+|+| .+...++..+|+. ||+||.|| |
T Consensus 218 l~a~~~l~~~~~~~~lv~~-~g~~~--~~~~~l~~~~~---~~~~v~~~g----~~g~~~~~~~~~~-ad~~v~~S--~- 283 (376)
T 1v4v_A 218 AQALKRVAEAFPHLTFVYP-VHLNP--VVREAVFPVLK---GVRNFVLLD----PLEYGSMAALMRA-SLLLVTDS--G- 283 (376)
T ss_dssp HHHHHHHHHHCTTSEEEEE-CCSCH--HHHHHHHHHHT---TCTTEEEEC----CCCHHHHHHHHHT-EEEEEESC--H-
T ss_pred HHHHHHHHhhCCCeEEEEE-CCCCH--HHHHHHHHHhc---cCCCEEEEC----CCCHHHHHHHHHh-CcEEEECC--c-
Confidence 9999998776666655544 23332 12344555443 246899998 4445688899996 99999999 3
Q ss_pred ccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 625 FGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 625 fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
|+ ++|||+||+|||++ +.||..+++.+| +|++++ .|+++++++|.+++ +|++.+++|++++
T Consensus 284 -g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~-~d~~~la~~i~~ll----~d~~~~~~~~~~~ 345 (376)
T 1v4v_A 284 -GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAG-TDPEGVYRVVKGLL----ENPEELSRMRKAK 345 (376)
T ss_dssp -HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECC-SCHHHHHHHHHHHH----TCHHHHHHHHHSC
T ss_pred -CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECC-CCHHHHHHHHHHHH----hChHhhhhhcccC
Confidence 44 88999999999998 579999988765 899996 49999999999998 8999999998754
No 25
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.86 E-value=3.6e-20 Score=206.98 Aligned_cols=282 Identities=12% Similarity=0.046 Sum_probs=194.2
Q ss_pred HHHHHHHHHcC-CCCeEEEEcCCCchHHHHHHHHh-cCCcEEEEecCCccccCCCCchhhhhcccccchhh--hhhHHHH
Q 005365 393 DVAVEIAKELQ-GKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSC--QFTADLI 468 (700)
Q Consensus 393 ~~~~~l~~~~~-~~pDlIh~h~~~~~lva~lla~~-~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~--~~~~E~~ 468 (700)
.++..+.+... ..-|+|..|.+...+++..+.++ .+.++.+-.|..++.. . .|. ... +...-..
T Consensus 136 ~fA~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~----e-~f~-------~Lp~~~r~ell~ 203 (496)
T 3t5t_A 136 DFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSA----D-YWR-------ILPKEIRTGILH 203 (496)
T ss_dssp HHHHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCH----H-HHT-------TSCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCH----H-HHh-------hCcHhHHHHHHH
Confidence 34444444432 25689999998887777777654 4679999999764332 1 111 111 1111224
Q ss_pred HHhhCCEEEecCHHHHHhhhhhhcccc-c-----c-ccccC----CCeEEeecCCCCCCCcceecC-----------CCC
Q 005365 469 AMNHTDFIITSTFQEIAGSKDTVGQYE-S-----H-TAFTL----PGLYRVVHGIDVFDPKFNIVS-----------PGA 526 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~~k~~~~~y~-~-----~-~~~~~----p~l~~v~nGId~~~~k~~vIp-----------~G~ 526 (700)
.+-.+|.|...++.....+.+.....- . . ..... ..+..+++|||. .+|.-.. .+.
T Consensus 204 gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~--~~f~~~~~~~~~~lr~~~~~~ 281 (496)
T 3t5t_A 204 GMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSP--LTLDGRNPQLPEGIEEWADGH 281 (496)
T ss_dssp HHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCG--GGC----CCCCTTHHHHHTTS
T ss_pred HHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCH--HHhchhhHHHHHHHHHHhCCc
Confidence 678899999999877654333221110 0 0 00000 124566778873 2332111 133
Q ss_pred ccccccCCchhhhchhhHHHHHHHHhhcCCCcc---EEEEec---CChhh-HHHHHHHHHHHHHcC----CCCcEEEecc
Q 005365 527 DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK---EHLKES---KDLEE-QAEMKKMYSLIDQYK----LNGQFRWISS 595 (700)
Q Consensus 527 d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~---l~i~g~---Gd~ee-~~~~~~l~~li~~l~----L~~~V~flG~ 595 (700)
...++++++.+.||+..+++|+ .++...|+.. ++++|. +++++ .+..+++.+++.+.+ .. .|+|+|
T Consensus 282 ~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~-~V~f~g- 358 (496)
T 3t5t_A 282 RLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD-TVRIDN- 358 (496)
T ss_dssp EEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT-SEEEEE-
T ss_pred eEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc-CEEEeC-
Confidence 4567889999999999999999 8888877643 444554 33332 233455666665543 22 699999
Q ss_pred ccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcC---CCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHH
Q 005365 596 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG---LPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 672 (700)
Q Consensus 596 ~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~G---lPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI 672 (700)
.++.+++..+|+. ||+||+||.+||||++++|||||| .|+|+|..+|..+.+ +.+|++|+|.|++++|++|
T Consensus 359 ---~v~~~el~aly~~-ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D~~~lA~AI 432 (496)
T 3t5t_A 359 ---DNDVNHTIACFRR-ADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFDLVEQAEAI 432 (496)
T ss_dssp ---CCCHHHHHHHHHH-CSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTBHHHHHHHH
T ss_pred ---CCCHHHHHHHHHh-ccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCCHHHHHHHH
Confidence 5678999999996 999999999999999999999997 999999999999988 3479999999999999999
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHhC
Q 005365 673 VDFFEKCKADPSYWDKISLGGLKRIEEK 700 (700)
Q Consensus 673 ~~ll~~~~~dp~~~~~ms~~ar~ra~e~ 700 (700)
.++++ .+++.++++.+++++++.++
T Consensus 433 ~~aL~---m~~~er~~r~~~~~~~V~~~ 457 (496)
T 3t5t_A 433 SAALA---AGPRQRAEAAARRRDAARPW 457 (496)
T ss_dssp HHHHH---CCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHc---CCHHHHHHHHHHHHHHHHHC
Confidence 99984 56788999999999988753
No 26
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.86 E-value=2.7e-21 Score=184.68 Aligned_cols=151 Identities=13% Similarity=0.117 Sum_probs=130.7
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
..+|+|+..+.||++.+++++..+. ..++..++++|.|+. .+.++++++++++ +|+| | .++.+++..
T Consensus 4 ~i~~~G~~~~~Kg~~~li~a~~~l~-~~~~~~l~i~G~g~~-----~~~~~~~~~~~~~--~v~~-g----~~~~~~~~~ 70 (166)
T 3qhp_A 4 KIAMVGRYSNEKNQSVLIKAVALSK-YKQDIVLLLKGKGPD-----EKKIKLLAQKLGV--KAEF-G----FVNSNELLE 70 (166)
T ss_dssp EEEEESCCSTTTTHHHHHHHHHTCT-TGGGEEEEEECCSTT-----HHHHHHHHHHHTC--EEEC-C----CCCHHHHHH
T ss_pred EEEEEeccchhcCHHHHHHHHHHhc-cCCCeEEEEEeCCcc-----HHHHHHHHHHcCC--eEEE-e----ecCHHHHHH
Confidence 3578999999999999999999874 335667777776532 2567788888887 7999 9 566799999
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCC-CEEE-cCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHH
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFA-TCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~Gl-PVVA-T~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
+|+. +|++|+||.+|+||++++|||+||+ |||+ ++.||..+++.++.+ +++++|+++++++|.+++ +|++.
T Consensus 71 ~~~~-adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~----~~~~~ 143 (166)
T 3qhp_A 71 ILKT-CTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWL----ENKLE 143 (166)
T ss_dssp HHTT-CSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHH----HCHHH
T ss_pred HHHh-CCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHH----hCHHH
Confidence 9997 9999999999999999999999998 9999 568999999988655 889999999999999998 79999
Q ss_pred HHHHHHHHHHHHH
Q 005365 686 WDKISLGGLKRIE 698 (700)
Q Consensus 686 ~~~ms~~ar~ra~ 698 (700)
+++|+++|++++.
T Consensus 144 ~~~~~~~~~~~~~ 156 (166)
T 3qhp_A 144 RERMQNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999874
No 27
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.85 E-value=2.9e-21 Score=210.50 Aligned_cols=203 Identities=12% Similarity=-0.002 Sum_probs=147.6
Q ss_pred HHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcceecCCCCc-cccccCCchhhhchhhHH
Q 005365 467 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD-MSIYFPYTEEKRRLKSFH 545 (700)
Q Consensus 467 ~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~~vIp~G~d-~~~F~g~~~~~Kgl~~Ll 545 (700)
+..++.+|.|++.|...++.+.+. + .+.+.+++|+.- +..... ..... ..++.+. ...|+.+.++
T Consensus 148 ~~~~~~~d~ii~~S~~~~~~l~~~-g---------~~ki~vi~n~~f--~~~~~~-~~~l~~~vi~~~~-~~~k~~~~ll 213 (374)
T 2xci_A 148 KILSKKFDLIIMRTQEDVEKFKTF-G---------AKRVFSCGNLKF--ICQKGK-GIKLKGEFIVAGS-IHTGEVEIIL 213 (374)
T ss_dssp HHHHTTCSEEEESCHHHHHHHHTT-T---------CCSEEECCCGGG--CCCCCS-CCCCSSCEEEEEE-ECGGGHHHHH
T ss_pred HHHHHhCCEEEECCHHHHHHHHHc-C---------CCeEEEcCCCcc--CCCcCh-hhhhcCCEEEEEe-CCCchHHHHH
Confidence 456889999999997776544331 1 123455555521 110000 00001 1222222 3468899999
Q ss_pred HHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC--------CcEEEeccccCcCChhHHHHHHHccCcEEE
Q 005365 546 PEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN--------GQFRWISSQMNRVRNGELYRYICDTKGAFV 617 (700)
Q Consensus 546 ~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~--------~~V~flG~~~d~v~~~el~~~la~~aDvfV 617 (700)
+|+..+....++..++++|.|. +. .++++++++++++. ++|.|.|.+ +++..+|+. +|+++
T Consensus 214 ~A~~~l~~~~p~~~lvivG~g~--~~--~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~------~dl~~~y~~-aDv~v 282 (374)
T 2xci_A 214 KAFKEIKKTYSSLKLILVPRHI--EN--AKIFEKKARDFGFKTSFFENLEGDVILVDRF------GILKELYPV-GKIAI 282 (374)
T ss_dssp HHHHHHHTTCTTCEEEEEESSG--GG--HHHHHHHHHHTTCCEEETTCCCSSEEECCSS------SCHHHHGGG-EEEEE
T ss_pred HHHHHHHhhCCCcEEEEECCCH--HH--HHHHHHHHHHCCCceEEecCCCCcEEEECCH------HHHHHHHHh-CCEEE
Confidence 9999998877888888888553 21 14677888888886 468887732 568888886 99988
Q ss_pred eCCC-CCCccHHHHHHHHcCCCEEEc-CCCCcccccccC-CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 618 QPAL-YEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNG-KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 618 ~PS~-~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg-~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
+||. .|++|++++||||||+|||++ +.++.+|++++. .+|++++++|+++|+++|.+++ +| +.+++|+++|+
T Consensus 283 l~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll----~d-~~r~~mg~~ar 357 (374)
T 2xci_A 283 VGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELL----SV-KKEIKVEEKSR 357 (374)
T ss_dssp ECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHH----HS-CCCCCHHHHHH
T ss_pred ECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHH----hH-HHHHHHHHHHH
Confidence 8865 477899999999999999975 789999988763 5788899999999999999998 68 99999999999
Q ss_pred HHHHh
Q 005365 695 KRIEE 699 (700)
Q Consensus 695 ~ra~e 699 (700)
+++++
T Consensus 358 ~~~~~ 362 (374)
T 2xci_A 358 EIKGC 362 (374)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99865
No 28
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.85 E-value=2.4e-21 Score=188.27 Aligned_cols=154 Identities=18% Similarity=0.180 Sum_probs=132.7
Q ss_pred cCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHH--HcCCCCcEEEeccccCc
Q 005365 522 VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLID--QYKLNGQFRWISSQMNR 599 (700)
Q Consensus 522 Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~--~l~L~~~V~flG~~~d~ 599 (700)
++......+|+|+..+.||++.+++++..+ ++..++++|.+... +.++++++ ++++.++|+|+| .
T Consensus 19 ~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~~-----~~l~~~~~~~~~~l~~~v~~~g----~ 85 (177)
T 2f9f_A 19 FKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKG-----DHAERYARKIMKIAPDNVKFLG----S 85 (177)
T ss_dssp CCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTT-----STHHHHHHHHHHHSCTTEEEEE----S
T ss_pred cCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCccH-----HHHHHHHHhhhcccCCcEEEeC----C
Confidence 355566788999999999999999999887 47788888877543 35667777 778899999999 6
Q ss_pred CChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhc
Q 005365 600 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 679 (700)
Q Consensus 600 v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~ 679 (700)
++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++ ++|+++++++|.+++
T Consensus 86 ~~~~e~~~~~~~-adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l~--- 160 (177)
T 2f9f_A 86 VSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAMKKVS--- 160 (177)
T ss_dssp CCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHHHHHH---
T ss_pred CCHHHHHHHHHh-CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHHHHHH---
Confidence 667899999997 999999999999999999999999999999999999999999999999 899999999999998
Q ss_pred cCCHHH-HHHHHHHHH
Q 005365 680 KADPSY-WDKISLGGL 694 (700)
Q Consensus 680 ~~dp~~-~~~ms~~ar 694 (700)
+|++. +++++++|+
T Consensus 161 -~~~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 161 -KNPDKFKKDCFRRAK 175 (177)
T ss_dssp -HCTTTTHHHHHHHHH
T ss_pred -hCHHHHHHHHHHHHh
Confidence 67664 555555544
No 29
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.75 E-value=3.1e-17 Score=179.18 Aligned_cols=345 Identities=12% Similarity=0.044 Sum_probs=190.6
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeE
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~ 353 (700)
+..|||++++.. ++|....++ .|+++|+++||+|+ ++|.... ....
T Consensus 18 ~~~MrIl~~~~~-------------~~Gh~~~~~--------~la~~L~~~GheV~----v~~~~~~-------~~~~-- 63 (412)
T 3otg_A 18 GRHMRVLFASLG-------------THGHTYPLL--------PLATAARAAGHEVT----FATGEGF-------AGTL-- 63 (412)
T ss_dssp CCSCEEEEECCS-------------SHHHHGGGH--------HHHHHHHHTTCEEE----EEECGGG-------HHHH--
T ss_pred cceeEEEEEcCC-------------CcccHHHHH--------HHHHHHHHCCCEEE----EEccHHH-------HHHH--
Confidence 456899999833 256666666 67777899999999 9886411 1011
Q ss_pred ecCccceEEEEecCCCccccc---c----c-------cccc-ccchhhH-----HHHHHHHHHHHHHHcCCCCeEEEEcC
Q 005365 354 VYGTKYSDILRVPFRTEKGVV---R----K-------WISR-FEVWPYL-----ETYTEDVAVEIAKELQGKPDLIIGNY 413 (700)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~---~----~-------~lsr-~~i~~~l-----~~f~~~~~~~l~~~~~~~pDlIh~h~ 413 (700)
...++.++.++.....++. . . .... ..+...+ ......+.+.+.+. +||+||++.
T Consensus 64 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~pDvVv~~~ 138 (412)
T 3otg_A 64 --RKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL---RPDLVVQEI 138 (412)
T ss_dssp --HHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH---CCSEEEEET
T ss_pred --HhcCCceeecCcccccchhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc---CCCEEEECc
Confidence 0125667766630000000 0 0 0000 0011111 11223445555555 899999974
Q ss_pred CCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhH---HHHHHhhCCEEEecCHHHHHhhhhh
Q 005365 414 SDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTA---DLIAMNHTDFIITSTFQEIAGSKDT 490 (700)
Q Consensus 414 ~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~---E~~al~~AD~IIt~S~~~~~~~k~~ 490 (700)
.. +.+.+++++.|+|+|++.|+....... ....|..+.. +...+.. ....+..+|.+++.+....+...+.
T Consensus 139 ~~--~~~~~aa~~~giP~v~~~~~~~~~~~~-~~~~~~~~~~---~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 212 (412)
T 3otg_A 139 SN--YGAGLAALKAGIPTICHGVGRDTPDDL-TRSIEEEVRG---LAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFR 212 (412)
T ss_dssp TC--HHHHHHHHHHTCCEEEECCSCCCCSHH-HHHHHHHHHH---HHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHH
T ss_pred hh--hHHHHHHHHcCCCEEEecccccCchhh-hHHHHHHHHH---HHHHcCCCCCcccccCCCCeEEeeCCHHhcCCccc
Confidence 33 346678889999999988875322100 0000000000 0000000 0001246788888886554322221
Q ss_pred hccccccccccCCCeEEeecCCCCCCCcc-eecCCCCc-cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCCh
Q 005365 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKF-NIVSPGAD-MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDL 568 (700)
Q Consensus 491 ~~~y~~~~~~~~p~l~~v~nGId~~~~k~-~vIp~G~d-~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ 568 (700)
+... ..|-.+...++.. ...++ ...+++.. ..++.|+.. .++...+..+++.+... +..+++++++..
T Consensus 213 ~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~ 282 (412)
T 3otg_A 213 ARPR------RHELRPVPFAEQG-DLPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSL 282 (412)
T ss_dssp TCTT------EEECCCCCCCCCC-CCCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSC
T ss_pred CCCC------cceeeccCCCCCC-CCCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCC
Confidence 1100 0000000001100 01111 11122222 234556664 55666666666665433 344444443322
Q ss_pred hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC--
Q 005365 569 EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG-- 646 (700)
Q Consensus 569 ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG-- 646 (700)
.. +.+. ++.++|+|+|+. + +..+++. +|+||.++ .+.+++|||+||+|+|++..++
T Consensus 283 -~~---~~l~------~~~~~v~~~~~~----~---~~~~l~~-ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q 340 (412)
T 3otg_A 283 -DV---SGLG------EVPANVRLESWV----P---QAALLPH-VDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDS 340 (412)
T ss_dssp -CC---TTCC------CCCTTEEEESCC----C---HHHHGGG-CSEEEESC----CHHHHHHHHHHTCCEEECCCSTTH
T ss_pred -Ch---hhhc------cCCCcEEEeCCC----C---HHHHHhc-CcEEEECC----chHHHHHHHHhCCCEEecCCchhH
Confidence 11 1111 356789999954 2 5667775 99999885 2489999999999999976554
Q ss_pred --cccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 647 --PAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 647 --~~EiI~dg~~G~lv~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
..+.+.++.+|++++++ |+++++++|.+++ +||+.+++|++.+++.+..
T Consensus 341 ~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll----~~~~~~~~~~~~~~~~~~~ 393 (412)
T 3otg_A 341 FANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLL----AEESYRAGARAVAAEIAAM 393 (412)
T ss_dssp HHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHhcC
Confidence 78888888899999987 9999999999998 7999999999999887653
No 30
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.73 E-value=9.4e-17 Score=172.49 Aligned_cols=232 Identities=12% Similarity=0.083 Sum_probs=156.9
Q ss_pred CCCeEEEEcCCCc---hHHHHHHHH--hcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEe
Q 005365 404 GKPDLIIGNYSDG---NIVASLLAH--KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (700)
Q Consensus 404 ~~pDlIh~h~~~~---~lva~lla~--~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt 478 (700)
.++|+|+.+++.. .+.+.++.+ +.++|+|+.+|++++..... ..+ .. ..|+..+++||.||+
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~~---------~~~--~~--~~E~~~y~~aD~Ii~ 139 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFSG---------NFY--LM--DRTIAYYNKADVVVA 139 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCGG---------GGG--GH--HHHHHHHTTCSEEEE
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCcc---------chh--hH--HHHHHHHHHCCEEEE
Confidence 4799999976543 233444554 44899999999997654210 111 11 248899999999999
Q ss_pred cCHHHHHhhhhhhccccccccccCCCeEEeecCC-CCCCCccee-cCCCCccccccCCchhhhchhhHHHHHHHHhhcCC
Q 005365 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI-DVFDPKFNI-VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV 556 (700)
Q Consensus 479 ~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI-d~~~~k~~v-Ip~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~ 556 (700)
.|+..++.+.+ +. .+.-..++.++ +. ...... .+......+|.|++.+...+..+ .+
T Consensus 140 ~S~~~~~~l~~----~G------~~~~ki~~~~~~~~-~~~~~~~~~~~~~~i~yaG~l~k~~~L~~l----------~~ 198 (339)
T 3rhz_A 140 PSQKMIDKLRD----FG------MNVSKTVVQGMWDH-PTQAPMFPAGLKREIHFPGNPERFSFVKEW----------KY 198 (339)
T ss_dssp SCHHHHHHHHH----TT------CCCSEEEECCSCCC-CCCCCCCCCEEEEEEEECSCTTTCGGGGGC----------CC
T ss_pred CCHHHHHHHHH----cC------CCcCceeecCCCCc-cCcccccccCCCcEEEEeCCcchhhHHHhC----------CC
Confidence 99666543332 21 11111122232 11 001000 11122356899999854333221 35
Q ss_pred CccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeC-CC------CCCccHHH
Q 005365 557 ENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQP-AL------YEAFGLTV 629 (700)
Q Consensus 557 ~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~P-S~------~E~fGl~v 629 (700)
+..++++|.|... .++ +|+|+| +++.+|+..+++. +|+.+.+ +. ...+|.++
T Consensus 199 ~~~f~ivG~G~~~---------------~l~-nV~f~G----~~~~~el~~~l~~-~~~~lv~~~~~~~~y~~~~~P~Kl 257 (339)
T 3rhz_A 199 DIPLKVYTWQNVE---------------LPQ-NVHKIN----YRPDEQLLMEMSQ-GGFGLVWMDDKDKEYQSLYCSYKL 257 (339)
T ss_dssp SSCEEEEESCCCC---------------CCT-TEEEEE----CCCHHHHHHHHHT-EEEEECCCCGGGHHHHTTCCCHHH
T ss_pred CCeEEEEeCCccc---------------CcC-CEEEeC----CCCHHHHHHHHHh-CCEEEEECCCchhHHHHhcChHHH
Confidence 7889999988531 245 899999 7778999999986 6776665 11 12568999
Q ss_pred HHHHHcCCCEEEcCCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 630 VEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 630 lEAMA~GlPVVAT~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
+||||||+|||+++.|+.+++|+++.+|+.++ +.++++++|..+ +++.+++|+++|++.++
T Consensus 258 ~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l------~~~~~~~m~~na~~~a~ 318 (339)
T 3rhz_A 258 GSFLAAGIPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV------NEDEYIELVKNVRSFNP 318 (339)
T ss_dssp HHHHHHTCCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC------CHHHHHHHHHHHHHHTH
T ss_pred HHHHHcCCCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh------CHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 688888888764 56789999999988754
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.70 E-value=6.6e-15 Score=159.64 Aligned_cols=321 Identities=12% Similarity=0.025 Sum_probs=175.3
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccCCCCCCCCCccceeEe
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~p~~~~~~~~~~~e~i 354 (700)
|..||+|.+ ..|||-.. .+| .++++|+++||+|. ++|....-. .+.+
T Consensus 1 M~~~i~i~~-------------GGTgGHi~------pal--ala~~L~~~g~~V~----~vg~~~g~e--------~~~v 47 (365)
T 3s2u_A 1 MKGNVLIMA-------------GGTGGHVF------PAL--ACAREFQARGYAVH----WLGTPRGIE--------NDLV 47 (365)
T ss_dssp --CEEEEEC-------------CSSHHHHH------HHH--HHHHHHHHTTCEEE----EEECSSSTH--------HHHT
T ss_pred CCCcEEEEc-------------CCCHHHHH------HHH--HHHHHHHhCCCEEE----EEECCchHh--------hchh
Confidence 667888764 12566433 344 67888899999999 887532110 0001
Q ss_pred cCccceEEEEecCCCccc--ccccccccccchhhHHHHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEE
Q 005365 355 YGTKYSDILRVPFRTEKG--VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (700)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~--~~~~~lsr~~i~~~l~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V 432 (700)
+ ..++.+..+|..+..+ ..+. +. ..+..+.. ...+.+.+++. +||+|++.....+..+.++++.+|+|++
T Consensus 48 ~-~~g~~~~~i~~~~~~~~~~~~~-~~--~~~~~~~~-~~~~~~~l~~~---~PDvVi~~g~~~s~p~~laA~~~~iP~v 119 (365)
T 3s2u_A 48 P-KAGLPLHLIQVSGLRGKGLKSL-VK--APLELLKS-LFQALRVIRQL---RPVCVLGLGGYVTGPGGLAARLNGVPLV 119 (365)
T ss_dssp G-GGTCCEEECC-----------------CHHHHHHH-HHHHHHHHHHH---CCSEEEECSSSTHHHHHHHHHHTTCCEE
T ss_pred h-hcCCcEEEEECCCcCCCCHHHH-HH--HHHHHHHH-HHHHHHHHHhc---CCCEEEEcCCcchHHHHHHHHHcCCCEE
Confidence 1 1244555555443221 1110 10 11111111 22344556666 8999999887777788888999999998
Q ss_pred EEecCCccccCCCCchhhhhcccccchhhhhhHHHHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeecCC
Q 005365 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (700)
Q Consensus 433 ~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGI 512 (700)
+.-.+... + + ..++..+.++.|.+..+.. +. +. .....+.+.+
T Consensus 120 ihe~n~~~-----G---~--------------~nr~l~~~a~~v~~~~~~~-------~~-~~-------~k~~~~g~pv 162 (365)
T 3s2u_A 120 IHEQNAVA-----G---T--------------ANRSLAPIARRVCEAFPDT-------FP-AS-------DKRLTTGNPV 162 (365)
T ss_dssp EEECSSSC-----C---H--------------HHHHHGGGCSEEEESSTTS-------SC-C----------CEECCCCC
T ss_pred EEecchhh-----h---h--------------HHHhhccccceeeeccccc-------cc-Cc-------CcEEEECCCC
Confidence 64332211 0 0 0223456688877665321 10 00 0111111111
Q ss_pred CC-----CCCcceecCCCCccccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC
Q 005365 513 DV-----FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN 587 (700)
Q Consensus 513 d~-----~~~k~~vIp~G~d~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~ 587 (700)
.. ...+...-+......++.|.....+..+.+.+++..+.... +.. ++...|.+.. +.+.+..++.+
T Consensus 163 r~~~~~~~~~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~-~~~-vi~~~G~~~~----~~~~~~~~~~~-- 234 (365)
T 3s2u_A 163 RGELFLDAHARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEI-RPA-IRHQAGRQHA----EITAERYRTVA-- 234 (365)
T ss_dssp CGGGCCCTTSSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTTT-CCE-EEEECCTTTH----HHHHHHHHHTT--
T ss_pred chhhccchhhhcccCCCCcEEEEECCcCCccccchhhHHHHHhccccc-ceE-EEEecCcccc----ccccceecccc--
Confidence 10 00111111111222344455555555556666666654322 222 2333343321 23444445444
Q ss_pred CcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc--------ccccccCCeEEE
Q 005365 588 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP--------AEIIVNGKSGYH 659 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~--------~EiI~dg~~G~l 659 (700)
.++++.|+.+ ++..+|+. ||++|.-+ -++|+.|+|++|+|+|..+.... ++.+.+...|++
T Consensus 235 ~~~~v~~f~~------dm~~~l~~-aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~ 303 (365)
T 3s2u_A 235 VEADVAPFIS------DMAAAYAW-ADLVICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRL 303 (365)
T ss_dssp CCCEEESCCS------CHHHHHHH-CSEEEECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEE
T ss_pred cccccccchh------hhhhhhcc-ceEEEecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEE
Confidence 4577888654 36777886 99999764 37899999999999998765432 234555567888
Q ss_pred ECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 660 IDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 660 v~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
++.. +++.|+++|.+++ .||+.+++|++++++.
T Consensus 304 l~~~~~~~~~L~~~i~~ll----~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 304 LPQKSTGAAELAAQLSEVL----MHPETLRSMADQARSL 338 (365)
T ss_dssp CCTTTCCHHHHHHHHHHHH----HCTHHHHHHHHHHHHT
T ss_pred eecCCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHhc
Confidence 8765 5899999999998 8999999999999875
No 32
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.64 E-value=1.9e-15 Score=164.72 Aligned_cols=97 Identities=11% Similarity=-0.008 Sum_probs=75.8
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~ 661 (700)
++++|++.|+ ++. ..+++. +|++|.. +-+.+++|||+||+|+|+. +..+..+.+++...|++++
T Consensus 282 ~~~~v~~~~~----~~~---~~ll~~-ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~ 349 (398)
T 4fzr_A 282 LPEGVLAAGQ----FPL---SAIMPA-CDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVP 349 (398)
T ss_dssp CCTTEEEESC----CCH---HHHGGG-CSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC
T ss_pred CCCcEEEeCc----CCH---HHHHhh-CCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecC
Confidence 5788999994 433 445554 9999975 4478999999999999994 5557788888889999998
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++ |+++++++|.+++ +||+++++|++.+++...
T Consensus 350 ~~~~~~~~l~~ai~~ll----~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 350 WEQAGVESVLAACARIR----DDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp -------CHHHHHHHHH----HCTHHHHHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHc
Confidence 87 7899999999998 799999999998887643
No 33
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.63 E-value=1.4e-15 Score=165.14 Aligned_cols=140 Identities=10% Similarity=-0.020 Sum_probs=101.9
Q ss_pred ccCCchhhhch-hhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHH
Q 005365 531 YFPYTEEKRRL-KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 609 (700)
Q Consensus 531 F~g~~~~~Kgl-~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~l 609 (700)
..|+....|+. ..+++++.+. ...++..+++.+++... +.+. ++.++|++.|+ ++..+++
T Consensus 224 ~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~-----~~l~------~~~~~v~~~~~----~~~~~ll--- 284 (391)
T 3tsa_A 224 CMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR-----ALLT------DLPDNARIAES----VPLNLFL--- 284 (391)
T ss_dssp ECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG-----GGCT------TCCTTEEECCS----CCGGGTG---
T ss_pred EcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcch-----hhcc------cCCCCEEEecc----CCHHHHH---
Confidence 34666554444 6666776666 55556666666554221 1111 35678999995 4445554
Q ss_pred HccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEECC----CCHHHHHHHHHHHHHhccC
Q 005365 610 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDP----YHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 610 a~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~p----~D~eaLAeaI~~ll~~~~~ 681 (700)
+ +||++|.. +.+.+++|||+||+|+|+. +..+..+.+.+...|..+++ .|+++++++|.+++ +
T Consensus 285 ~-~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll----~ 355 (391)
T 3tsa_A 285 R-TCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVL----G 355 (391)
T ss_dssp G-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHH----T
T ss_pred h-hCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHH----c
Confidence 4 59999975 3457999999999999994 45567788888889999998 78999999999998 8
Q ss_pred CHHHHHHHHHHHHHHHH
Q 005365 682 DPSYWDKISLGGLKRIE 698 (700)
Q Consensus 682 dp~~~~~ms~~ar~ra~ 698 (700)
||+.+++|++.+++...
T Consensus 356 ~~~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 356 DTGFAAAAIKLSDEITA 372 (391)
T ss_dssp CTHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHc
Confidence 99999999988877643
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.62 E-value=4.1e-14 Score=155.64 Aligned_cols=97 Identities=11% Similarity=0.036 Sum_probs=79.4
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~ 661 (700)
++++|+|+|+.+ .. .+|+. +|+||..+- +++++|||+||+|+|+++.++ ..+.+.+...|+.++
T Consensus 281 ~~~~v~~~~~~~----~~---~~l~~-ad~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~ 348 (430)
T 2iyf_A 281 LPDNVEVHDWVP----QL---AILRQ-ADLFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLA 348 (430)
T ss_dssp CCTTEEEESSCC----HH---HHHTT-CSEEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECC
T ss_pred CCCCeEEEecCC----HH---HHhhc-cCEEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcC
Confidence 567899999544 33 56665 999999752 379999999999999998765 466677777899998
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~ 698 (700)
++ |+++++++|.+++ +|++.++++++.+++...
T Consensus 349 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 349 TEEATADLLRETALALV----DDPEVARRLRRIQAEMAQ 383 (430)
T ss_dssp CC-CCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHh
Confidence 87 8999999999998 799999999988877653
No 35
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.59 E-value=6e-14 Score=153.02 Aligned_cols=137 Identities=14% Similarity=0.027 Sum_probs=97.0
Q ss_pred ccccCCchhh-hchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEK-RRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~-Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~ 607 (700)
.+++|+.... ++...+..+++.+... +..+++++++... +.+. +++++|++.|+. +.. .
T Consensus 236 ~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~-----~~l~------~~~~~v~~~~~~----~~~---~ 295 (398)
T 3oti_A 236 AITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDI-----SPLG------TLPRNVRAVGWT----PLH---T 295 (398)
T ss_dssp EECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCC-----GGGC------SCCTTEEEESSC----CHH---H
T ss_pred EEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcCh-----hhhc------cCCCcEEEEccC----CHH---H
Confidence 3456777655 4666666666666543 4566666555321 1111 357789999954 334 4
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEE----cCCCCcc--cccccCCeEEEECCC--CHHHHHHHHHHHHHhc
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA----TCKGGPA--EIIVNGKSGYHIDPY--HGEQAAEILVDFFEKC 679 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVA----T~~GG~~--EiI~dg~~G~lv~p~--D~eaLAeaI~~ll~~~ 679 (700)
+++. +|+||.. +-+.+++|||++|+|+|+ .+..+.. +.+++...|+.+++. ++++++ +++
T Consensus 296 ll~~-ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll--- 363 (398)
T 3oti_A 296 LLRT-CTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLI--- 363 (398)
T ss_dssp HHTT-CSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHH---
T ss_pred HHhh-CCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHH---
Confidence 5554 9999975 445799999999999999 5678888 999988899999876 566665 666
Q ss_pred cCCHHHHHHHHHHHHHHHH
Q 005365 680 KADPSYWDKISLGGLKRIE 698 (700)
Q Consensus 680 ~~dp~~~~~ms~~ar~ra~ 698 (700)
+||+++++|++.+++...
T Consensus 364 -~~~~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 364 -GDESLRTAAREVREEMVA 381 (398)
T ss_dssp -HCHHHHHHHHHHHHHHHT
T ss_pred -cCHHHHHHHHHHHHHHHh
Confidence 799999999998887653
No 36
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.58 E-value=7.8e-14 Score=152.92 Aligned_cols=260 Identities=13% Similarity=0.094 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEcCCCch-HHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHH
Q 005365 388 ETYTEDVAVEIAKELQGKPDLIIGNYSDGN-IVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTAD 466 (700)
Q Consensus 388 ~~f~~~~~~~l~~~~~~~pDlIh~h~~~~~-lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E 466 (700)
......+.+.+.+. +||+||++..... +.+.+.+++.|||+++..++. .. +... ..|.. ... -
T Consensus 97 ~~~~~~l~~~l~~~---kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-rs-~~~~-~~~~~-----~~~-----r 160 (396)
T 3dzc_A 97 SKILLGMQQVLSSE---QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-RT-GNIY-SPWPE-----EGN-----R 160 (396)
T ss_dssp HHHHHHHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC-CC-SCTT-SSTTH-----HHH-----H
T ss_pred HHHHHHHHHHHHhc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-cc-cccc-cCCcH-----HHH-----H
Confidence 33444566666666 8999999875544 666788899999987644333 11 1100 01100 000 1
Q ss_pred HHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeec-CCCCCC---Cc--------------ceecCCCCcc
Q 005365 467 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDVFD---PK--------------FNIVSPGADM 528 (700)
Q Consensus 467 ~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n-GId~~~---~k--------------~~vIp~G~d~ 528 (700)
...-+.+|.+++.|+...+.+.+. |. ....++.+.| ++|... .+ +.+++++...
T Consensus 161 ~~~~~~a~~~~~~se~~~~~l~~~-G~-------~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~ 232 (396)
T 3dzc_A 161 KLTAALTQYHFAPTDTSRANLLQE-NY-------NAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKL 232 (396)
T ss_dssp HHHHHTCSEEEESSHHHHHHHHHT-TC-------CGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEE
T ss_pred HHHHHhcCEEECCCHHHHHHHHHc-CC-------CcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCE
Confidence 123467899999997665433221 11 0011333333 222100 00 0001122222
Q ss_pred ccc-cCCc-hhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 529 SIY-FPYT-EEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 529 ~~F-~g~~-~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
.+. .++. ...|++..+++|+..+....++..+++.. |+++. ..+.++++ ++..++|.+++ .+...++.
T Consensus 233 vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~-g~~~~--~~~~l~~~---~~~~~~v~~~~----~lg~~~~~ 302 (396)
T 3dzc_A 233 ILVTGHRRESFGGGFERICQALITTAEQHPECQILYPV-HLNPN--VREPVNKL---LKGVSNIVLIE----PQQYLPFV 302 (396)
T ss_dssp EEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEEC-CBCHH--HHHHHHHH---TTTCTTEEEEC----CCCHHHHH
T ss_pred EEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEe-CCChH--HHHHHHHH---HcCCCCEEEeC----CCCHHHHH
Confidence 232 3232 23467889999999998776666555532 32221 12233332 34557899988 55567888
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHH
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSY 685 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~ 685 (700)
.+|+. ||++|.+| | |+ .+|||+||+|||++ +.++..|++++| +++++++ |++++++++.+++ +|++.
T Consensus 303 ~l~~~-ad~vv~~S---G-g~-~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~~-d~~~l~~ai~~ll----~d~~~ 370 (396)
T 3dzc_A 303 YLMDR-AHIILTDS---G-GI-QEEAPSLGKPVLVMRETTERPEAVAAG-TVKLVGT-NQQQICDALSLLL----TDPQA 370 (396)
T ss_dssp HHHHH-CSEEEESC---S-GG-GTTGGGGTCCEEECCSSCSCHHHHHHT-SEEECTT-CHHHHHHHHHHHH----HCHHH
T ss_pred HHHHh-cCEEEECC---c-cH-HHHHHHcCCCEEEccCCCcchHHHHcC-ceEEcCC-CHHHHHHHHHHHH----cCHHH
Confidence 99986 99999998 3 43 48999999999999 788889999888 5788765 8999999999998 79999
Q ss_pred HHHHHHHH
Q 005365 686 WDKISLGG 693 (700)
Q Consensus 686 ~~~ms~~a 693 (700)
+++|++++
T Consensus 371 ~~~m~~~~ 378 (396)
T 3dzc_A 371 YQAMSQAH 378 (396)
T ss_dssp HHHHHTSC
T ss_pred HHHHhhcc
Confidence 99998754
No 37
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.56 E-value=8.4e-14 Score=151.04 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=77.9
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc-----CCCCcccccccCCeEEEE
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-----CKGGPAEIIVNGKSGYHI 660 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-----~~GG~~EiI~dg~~G~lv 660 (700)
+.++|++.|+.+ .. .+++. +|++|..+- ..+++|||++|+|+|+. +..+.++.+.+...|..+
T Consensus 279 ~~~~v~~~~~~~----~~---~ll~~-ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~ 346 (402)
T 3ia7_A 279 LPPNVEAHQWIP----FH---SVLAH-ARACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL 346 (402)
T ss_dssp CCTTEEEESCCC----HH---HHHTT-EEEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC
T ss_pred CCCcEEEecCCC----HH---HHHhh-CCEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc
Confidence 567899999543 33 56665 999998852 37899999999999954 445778888888899999
Q ss_pred CCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 661 DPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 661 ~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
+++ ++++++++|.+++ +|++.++++++.+.+..
T Consensus 347 ~~~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~ 381 (402)
T 3ia7_A 347 RPDQLEPASIREAVERLA----ADSAVRERVRRMQRDIL 381 (402)
T ss_dssp CGGGCSHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHh
Confidence 876 8999999999998 79999999988776653
No 38
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.56 E-value=2.7e-13 Score=149.00 Aligned_cols=260 Identities=13% Similarity=0.128 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHHcCCCCeEEEEcCCC-chHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHH
Q 005365 388 ETYTEDVAVEIAKELQGKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTAD 466 (700)
Q Consensus 388 ~~f~~~~~~~l~~~~~~~pDlIh~h~~~-~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E 466 (700)
......+.+.+.+. +||+||++... ..+.+.+.+++.|||+++...+. .+ +... ..|.. ... .
T Consensus 100 ~~~~~~l~~~l~~~---kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl-rs-~~~~-~~~p~-----~~~-----r 163 (403)
T 3ot5_A 100 SRVMNGINEVIAAE---NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL-RT-WNKY-SPFPE-----EMN-----R 163 (403)
T ss_dssp HHHHHHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-CC-SCTT-SSTTH-----HHH-----H
T ss_pred HHHHHHHHHHHHHc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-cc-cccc-cCCcH-----HHH-----H
Confidence 33444566666666 99999998753 44556788899999986543332 11 0000 00100 000 1
Q ss_pred HHHHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeec-CCCCC---CCc---cee---cCCCCccccccCCch
Q 005365 467 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDVF---DPK---FNI---VSPGADMSIYFPYTE 536 (700)
Q Consensus 467 ~~al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n-GId~~---~~k---~~v---Ip~G~d~~~F~g~~~ 536 (700)
...-+.+|.+++.|+...+.+.+. |- ....++.+.| ++|.. ..+ ... .+++.-..++.++..
T Consensus 164 ~~~~~~a~~~~~~se~~~~~l~~~-Gi-------~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l~~~~~vlv~~~r~~ 235 (403)
T 3ot5_A 164 QLTGVMADIHFSPTKQAKENLLAE-GK-------DPATIFVTGNTAIDALKTTVQKDYHHPILENLGDNRLILMTAHRRE 235 (403)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHT-TC-------CGGGEEECCCHHHHHHHHHSCTTCCCHHHHSCTTCEEEEECCCCHH
T ss_pred HHHHHhcCEEECCCHHHHHHHHHc-CC-------CcccEEEeCCchHHHHHhhhhhhcchHHHHhccCCCEEEEEeCccc
Confidence 123445899999997765433221 10 0011223322 22210 000 000 011111123344433
Q ss_pred h-hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcE
Q 005365 537 E-KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGA 615 (700)
Q Consensus 537 ~-~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDv 615 (700)
. .|++..+++++..+....++..+++..+ +++. ..+.+++. ++..++|+++| .+...++..+|+. ||+
T Consensus 236 ~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~-~~~~--~~~~l~~~---~~~~~~v~l~~----~l~~~~~~~l~~~-ad~ 304 (403)
T 3ot5_A 236 NLGEPMQGMFEAVREIVESREDTELVYPMH-LNPA--VREKAMAI---LGGHERIHLIE----PLDAIDFHNFLRK-SYL 304 (403)
T ss_dssp HHTTHHHHHHHHHHHHHHHCTTEEEEEECC-SCHH--HHHHHHHH---HTTCTTEEEEC----CCCHHHHHHHHHH-EEE
T ss_pred ccCcHHHHHHHHHHHHHHhCCCceEEEecC-CCHH--HHHHHHHH---hCCCCCEEEeC----CCCHHHHHHHHHh-cCE
Confidence 2 3678899999999987777766555432 2221 11222222 34456899999 5556789999997 999
Q ss_pred EEeCCCCCCccHHHHHHHHcCCCEEEc-CCCCcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 616 FVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 616 fV~PS~~E~fGl~vlEAMA~GlPVVAT-~~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
+|.+| |...+|||+||+|+|++ +.|+..|.++.| +|+++++ |++++++++..++ .|++.+++|++++
T Consensus 305 vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d~~~l~~ai~~ll----~~~~~~~~m~~~~ 372 (403)
T 3ot5_A 305 VFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-NKENLIKEALDLL----DNKESHDKMAQAA 372 (403)
T ss_dssp EEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-CHHHHHHHHHHHH----HCHHHHHHHHHSC
T ss_pred EEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-CHHHHHHHHHHHH----cCHHHHHHHHhhc
Confidence 99998 44448999999999999 788888998777 8999986 9999999999998 7999999998754
No 39
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.54 E-value=4.2e-13 Score=145.35 Aligned_cols=95 Identities=18% Similarity=0.124 Sum_probs=76.1
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~ 661 (700)
++++|.+ |+ ++..+ +++ .+|+||..+ -+++++|||+||+|+|+.+.++ .++.+++...|+.++
T Consensus 262 ~~~~v~~-~~----~~~~~---~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~ 328 (384)
T 2p6p_A 262 EVPQARV-GW----TPLDV---VAP-TCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALL 328 (384)
T ss_dssp HCTTSEE-EC----CCHHH---HGG-GCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECC
T ss_pred CCCceEE-cC----CCHHH---HHh-hCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecC
Confidence 3568999 94 44444 455 499999973 3569999999999999998754 677777777899998
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
+. ++++++++|.+++ +|+++++++++.+.+..
T Consensus 329 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 329 PGEDSTEAIADSCQELQ----AKDTYARRAQDLSREIS 362 (384)
T ss_dssp TTCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH
Confidence 75 7999999999998 79999999988877653
No 40
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.49 E-value=1.2e-12 Score=143.13 Aligned_cols=96 Identities=14% Similarity=-0.018 Sum_probs=76.9
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc----CCCCcccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT----~~GG~~EiI~dg~~G~lv~ 661 (700)
++++|++.|+.+ .. .+++. +|++|..+- ..+++|||++|+|+|+. +....++.+.+...|..++
T Consensus 295 ~~~~v~~~~~~~----~~---~ll~~-ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~ 362 (415)
T 3rsc_A 295 LPPNVEAHRWVP----HV---KVLEQ-ATVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLP 362 (415)
T ss_dssp CCTTEEEESCCC----HH---HHHHH-EEEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECC
T ss_pred CCCcEEEEecCC----HH---HHHhh-CCEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcc
Confidence 567899999543 34 55554 999998752 36899999999999995 4455677777778899998
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
++ ++++++++|.+++ +|++.++++++.+.+..
T Consensus 363 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 396 (415)
T 3rsc_A 363 GEKADGDTLLAAVGAVA----ADPALLARVEAMRGHVR 396 (415)
T ss_dssp GGGCCHHHHHHHHHHHH----TCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH
Confidence 76 8999999999998 89999999988776654
No 41
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.32 E-value=2.7e-11 Score=133.99 Aligned_cols=137 Identities=12% Similarity=0.038 Sum_probs=94.4
Q ss_pred ccccCCchh-----hhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChh
Q 005365 529 SIYFPYTEE-----KRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNG 603 (700)
Q Consensus 529 ~~F~g~~~~-----~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~ 603 (700)
.+++|+... .+.+..+++++..+ +..+++.+++... +.+. +++++|++.|+ ++..
T Consensus 271 ~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-----~~l~------~~~~~v~~~~~----~~~~ 330 (441)
T 2yjn_A 271 CLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQL-----EGVA------NIPDNVRTVGF----VPMH 330 (441)
T ss_dssp EEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTT-----SSCS------SCCSSEEECCS----CCHH
T ss_pred EEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcch-----hhhc------cCCCCEEEecC----CCHH
Confidence 345566654 36677777777543 3445544433211 1111 35678999994 4444
Q ss_pred HHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEECCC--CHHHHHHHHHHHHH
Q 005365 604 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHIDPY--HGEQAAEILVDFFE 677 (700)
Q Consensus 604 el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~p~--D~eaLAeaI~~ll~ 677 (700)
++ +. ++|++|.. +-+.+++|||++|+|+|+...++ .++.+++...|+.+++. ++++++++|.+++
T Consensus 331 ~l---l~-~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll- 401 (441)
T 2yjn_A 331 AL---LP-TCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVL- 401 (441)
T ss_dssp HH---GG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHH-
T ss_pred HH---Hh-hCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHh-
Confidence 44 45 59999985 34579999999999999998744 56777777789999876 8999999999998
Q ss_pred hccCCHHHHHHHHHHHHHHH
Q 005365 678 KCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 678 ~~~~dp~~~~~ms~~ar~ra 697 (700)
+|+++++++++.+.+..
T Consensus 402 ---~~~~~~~~~~~~~~~~~ 418 (441)
T 2yjn_A 402 ---DDPAHRAGAARMRDDML 418 (441)
T ss_dssp ---HCHHHHHHHHHHHHHHH
T ss_pred ---cCHHHHHHHHHHHHHHH
Confidence 79999999988776653
No 42
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.16 E-value=2.6e-10 Score=123.65 Aligned_cols=93 Identities=16% Similarity=0.200 Sum_probs=67.5
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv 660 (700)
.+++++.+.+ +++..+++ . .+|+||.- +-.++++|||++|+|+|+....+ .++.+++...|..+
T Consensus 285 ~~~~~v~~~~----~~p~~~lL---~-~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l 352 (400)
T 4amg_A 285 ELPANVRVVE----WIPLGALL---E-TCDAIIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA 352 (400)
T ss_dssp CCCTTEEEEC----CCCHHHHH---T-TCSEEEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEEe----ecCHHHHh---h-hhhheecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc
Confidence 4678899998 55555554 4 49999875 34579999999999999965544 55666666678888
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 661 DPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 661 ~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
++. +.++++|.+++ +||+++++..+-+.+
T Consensus 353 ~~~--~~~~~al~~lL----~d~~~r~~a~~l~~~ 381 (400)
T 4amg_A 353 EAG--SLGAEQCRRLL----DDAGLREAALRVRQE 381 (400)
T ss_dssp CTT--TCSHHHHHHHH----HCHHHHHHHHHHHHH
T ss_pred CCC--CchHHHHHHHH----cCHHHHHHHHHHHHH
Confidence 754 45678899988 799988776655443
No 43
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.14 E-value=5.1e-10 Score=122.11 Aligned_cols=247 Identities=13% Similarity=0.101 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhhhcccccchhhhhhHHHH
Q 005365 389 TYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLI 468 (700)
Q Consensus 389 ~f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~~~~~~y~~~~~~~~E~~ 468 (700)
.....+.+.+.+. +||+|+++.......+.+.|++.|||+++...++ .. .+..+.. ... ...
T Consensus 81 ~~~~~l~~~l~~~---kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl-rs----~~~~~pe-----e~n-----R~~ 142 (385)
T 4hwg_A 81 LVIEKVDEVLEKE---KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN-RC----FDQRVPE-----EIN-----RKI 142 (385)
T ss_dssp HHHHHHHHHHHHH---CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-CC----SCTTSTH-----HHH-----HHH
T ss_pred HHHHHHHHHHHhc---CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-cc----ccccCcH-----HHH-----HHH
Confidence 3444556666666 8999999775433334778889999976544333 11 0001100 000 112
Q ss_pred HHhhCCEEEecCHHHHHhhhhhhccccccccccCCCeEEeec-CCCCCC--------C----cceecCCCCcccc-ccCC
Q 005365 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDVFD--------P----KFNIVSPGADMSI-YFPY 534 (700)
Q Consensus 469 al~~AD~IIt~S~~~~~~~k~~~~~y~~~~~~~~p~l~~v~n-GId~~~--------~----k~~vIp~G~d~~~-F~g~ 534 (700)
.-+.+|.+++.|+...+.+.+. |.-+ ..++.+-| ++|... . ++. ++++ ...+ ..++
T Consensus 143 ~~~~a~~~~~~te~~~~~l~~~-G~~~-------~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lg-l~~~-~~iLvt~hr 212 (385)
T 4hwg_A 143 IDHISDVNITLTEHARRYLIAE-GLPA-------ELTFKSGSHMPEVLDRFMPKILKSDILDKLS-LTPK-QYFLISSHR 212 (385)
T ss_dssp HHHHCSEEEESSHHHHHHHHHT-TCCG-------GGEEECCCSHHHHHHHHHHHHHHCCHHHHTT-CCTT-SEEEEEECC
T ss_pred HHhhhceeecCCHHHHHHHHHc-CCCc-------CcEEEECCchHHHHHHhhhhcchhHHHHHcC-CCcC-CEEEEEeCC
Confidence 2356899999997665432221 1000 01222222 112000 0 001 1111 1222 2233
Q ss_pred ch---hhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHc-C-C--CCcEEEeccccCcCChhHHHH
Q 005365 535 TE---EKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQY-K-L--NGQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 535 ~~---~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l-~-L--~~~V~flG~~~d~v~~~el~~ 607 (700)
.+ ..|++..+++++..+.... +..+++.. + . ..++.++++ + + .++|.+++ .+...++..
T Consensus 213 ~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~-~-p-------~~~~~l~~~~~~~~~~~~v~l~~----~lg~~~~~~ 278 (385)
T 4hwg_A 213 EENVDVKNNLKELLNSLQMLIKEY-NFLIIFST-H-P-------RTKKRLEDLEGFKELGDKIRFLP----AFSFTDYVK 278 (385)
T ss_dssp C-----CHHHHHHHHHHHHHHHHH-CCEEEEEE-C-H-------HHHHHHHTSGGGGGTGGGEEECC----CCCHHHHHH
T ss_pred chhcCcHHHHHHHHHHHHHHHhcC-CeEEEEEC-C-h-------HHHHHHHHHHHHhcCCCCEEEEc----CCCHHHHHH
Confidence 22 3367888999999887543 34333322 2 2 133444444 3 2 36799987 555678888
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC-CcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHH
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYW 686 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G-G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~ 686 (700)
+++. ||+++.+| |.+..||+++|+|+|+.... +.+|.++.| ++.++++ |++++++++..++ +|+..+
T Consensus 279 l~~~-adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d~~~i~~ai~~ll----~d~~~~ 346 (385)
T 4hwg_A 279 LQMN-AFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-KAERVLQAVKTIT----EEHDNN 346 (385)
T ss_dssp HHHH-CSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-SHHHHHHHHHHHH----TTCBTT
T ss_pred HHHh-CcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-CHHHHHHHHHHHH----hChHHH
Confidence 8886 99999887 55789999999999998554 367888776 6788764 8999999999998 666554
Q ss_pred HHH
Q 005365 687 DKI 689 (700)
Q Consensus 687 ~~m 689 (700)
++|
T Consensus 347 ~~m 349 (385)
T 4hwg_A 347 KRT 349 (385)
T ss_dssp BCC
T ss_pred HHh
Confidence 443
No 44
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.13 E-value=4.4e-09 Score=115.07 Aligned_cols=93 Identities=14% Similarity=0.075 Sum_probs=69.3
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCc----ccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~----~EiI~dg~~G~lv 660 (700)
+..++|++.| +++..+++ . .+|++|..+- ..++.|||++|+|+|+...++- .+.+++...|..+
T Consensus 265 ~~~~~v~~~~----~~~~~~ll---~-~~d~~v~~gG----~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l 332 (404)
T 3h4t_A 265 DEGDDCLVVG----EVNHQVLF---G-RVAAVVHHGG----AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAH 332 (404)
T ss_dssp SCCTTEEEES----SCCHHHHG---G-GSSEEEECCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEec----CCCHHHHH---h-hCcEEEECCc----HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEecc
Confidence 3467899998 44455544 4 5999998742 2789999999999999866543 3445556678888
Q ss_pred CCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 005365 661 DPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGL 694 (700)
Q Consensus 661 ~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar 694 (700)
++. ++++++++|.+++ + |++++++++.+.
T Consensus 333 ~~~~~~~~~l~~ai~~ll----~-~~~~~~~~~~~~ 363 (404)
T 3h4t_A 333 DGPTPTVESLSAALATAL----T-PGIRARAAAVAG 363 (404)
T ss_dssp SSSSCCHHHHHHHHHHHT----S-HHHHHHHHHHHT
T ss_pred CcCCCCHHHHHHHHHHHh----C-HHHHHHHHHHHH
Confidence 754 7899999999997 6 888887776543
No 45
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.12 E-value=6.5e-09 Score=113.98 Aligned_cols=95 Identities=19% Similarity=0.136 Sum_probs=73.8
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~ 661 (700)
++++|++.|+. +.. .+++. +|+||..+ -.++++|||++|+|+|+....+ ..+.+.+...|+.++
T Consensus 303 ~~~~v~~~~~~----~~~---~~l~~-~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~ 370 (424)
T 2iya_A 303 VPPNVEVHQWV----PQL---DILTK-ASAFITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIP 370 (424)
T ss_dssp CCTTEEEESSC----CHH---HHHTT-CSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECC
T ss_pred CCCCeEEecCC----CHH---HHHhh-CCEEEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcC
Confidence 56789999944 333 45665 99999863 2479999999999999997643 455666667899987
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
+. ++++++++|.+++ +|+++++++++.+.+.
T Consensus 371 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~ 403 (424)
T 2iya_A 371 RDQVTAEKLREAVLAVA----SDPGVAERLAAVRQEI 403 (424)
T ss_dssp GGGCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHH
Confidence 65 8899999999998 7998888887766553
No 46
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.05 E-value=3.8e-09 Score=120.08 Aligned_cols=154 Identities=8% Similarity=-0.032 Sum_probs=115.2
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEE--EecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHH
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL--KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGEL 605 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i--~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el 605 (700)
..+|.......|....+++++.+++...|+..+.+ .|.+.+.....+ +.+.+.|++++|.|+| .++..+.
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~----~~~~~~GI~~Rv~F~g----~~p~~e~ 512 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYV----ERFIKSYLGDSATAHP----HSPYHQY 512 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHH----HHHHHHHHGGGEEEEC----CCCHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHH----HHHHHcCCCccEEEcC----CCCHHHH
Confidence 34555555667889999999999998888765543 343344433222 3345678888999999 6667888
Q ss_pred HHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccc------cCCeEE-EECCCCHHHHHHHHHHHHHh
Q 005365 606 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV------NGKSGY-HIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 606 ~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~------dg~~G~-lv~p~D~eaLAeaI~~ll~~ 678 (700)
...++. +|+|+-|+.+.+ |+|.+|||+||+|||+...+++..-+. -|..++ +.+ |.++.+++..++.
T Consensus 513 la~y~~-aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~--d~eeYv~~Av~La-- 586 (631)
T 3q3e_A 513 LRILHN-CDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN--TVDEYVERAVRLA-- 586 (631)
T ss_dssp HHHHHT-CSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES--SHHHHHHHHHHHH--
T ss_pred HHHHhc-CcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC--CHHHHHHHHHHHh--
Confidence 888886 999999997755 999999999999999977666655542 244443 333 7899999998887
Q ss_pred ccCCHHHHHHHHHHHHHHH
Q 005365 679 CKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 679 ~~~dp~~~~~ms~~ar~ra 697 (700)
.|++.+++++++.+++.
T Consensus 587 --~D~~~l~~LR~~Lr~~~ 603 (631)
T 3q3e_A 587 --ENHQERLELRRYIIENN 603 (631)
T ss_dssp --HCHHHHHHHHHHHHHSC
T ss_pred --CCHHHHHHHHHHHHHHh
Confidence 89999999999988763
No 47
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.95 E-value=5.4e-08 Score=106.51 Aligned_cols=93 Identities=14% Similarity=-0.010 Sum_probs=70.4
Q ss_pred CCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEEC
Q 005365 586 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 661 (700)
Q Consensus 586 L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv~ 661 (700)
++++|++.| +++..++ +. ++|+||..+ -.++++|||++|+|+|+....+ ..+.+++...|..++
T Consensus 283 ~~~~v~~~~----~~~~~~~---l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~ 350 (415)
T 1iir_A 283 DGADCFAIG----EVNHQVL---FG-RVAAVIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHD 350 (415)
T ss_dssp CGGGEEECS----SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS
T ss_pred CCCCEEEeC----cCChHHH---Hh-hCCEEEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCC
Confidence 456799988 4455555 45 599999863 2379999999999999987655 566677777899887
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 005365 662 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLK 695 (700)
Q Consensus 662 p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ 695 (700)
+. ++++++++|.++ .|+++++++++.+.+
T Consensus 351 ~~~~~~~~l~~~i~~l-----~~~~~~~~~~~~~~~ 381 (415)
T 1iir_A 351 GPIPTFDSLSAALATA-----LTPETHARATAVAGT 381 (415)
T ss_dssp SSSCCHHHHHHHHHHH-----TSHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH-----cCHHHHHHHHHHHHH
Confidence 54 788898888776 578888887776543
No 48
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.89 E-value=1.7e-07 Score=102.54 Aligned_cols=92 Identities=15% Similarity=0.026 Sum_probs=68.5
Q ss_pred CCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccCCeEEEE
Q 005365 585 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHI 660 (700)
Q Consensus 585 ~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg~~G~lv 660 (700)
.+++++++.+ +++..++ +. ++|+||.- +-..++.|||++|+|+|+....+ .++.+++...|..+
T Consensus 283 ~~~~~v~~~~----~~~~~~l---l~-~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~ 350 (416)
T 1rrv_A 283 DDRDDCFAID----EVNFQAL---FR-RVAAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH 350 (416)
T ss_dssp CCCTTEEEES----SCCHHHH---GG-GSSEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC
T ss_pred CCCCCEEEec----cCChHHH---hc-cCCEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCC
Confidence 3567899998 4444554 45 59999985 23469999999999999976544 55566666789888
Q ss_pred CC--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 661 DP--YHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 661 ~p--~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
+. .++++++++|.++ .|+++++++++.+
T Consensus 351 ~~~~~~~~~l~~~i~~l-----~~~~~~~~~~~~~ 380 (416)
T 1rrv_A 351 DGPTPTFESLSAALTTV-----LAPETRARAEAVA 380 (416)
T ss_dssp SSSCCCHHHHHHHHHHH-----TSHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHh-----hCHHHHHHHHHHH
Confidence 65 4788888888776 5888888877654
No 49
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.82 E-value=1.1e-08 Score=97.75 Aligned_cols=130 Identities=13% Similarity=0.116 Sum_probs=90.9
Q ss_pred cccCCch---hhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHH
Q 005365 530 IYFPYTE---EKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY 606 (700)
Q Consensus 530 ~F~g~~~---~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~ 606 (700)
+++|+.. +.|.+..+++++..+ +..+++++++...+ +++++|++.| +++..++.
T Consensus 26 v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~--------------~~~~~v~~~~----~~~~~~~l 82 (170)
T 2o6l_A 26 FSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKPD--------------TLGLNTRLYK----WIPQNDLL 82 (170)
T ss_dssp EECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCCT--------------TCCTTEEEES----SCCHHHHH
T ss_pred EECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCcc--------------cCCCcEEEec----CCCHHHHh
Confidence 4455553 456666666666432 24455555443210 3567899999 44455655
Q ss_pred HHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC----CcccccccCCeEEEECCC--CHHHHHHHHHHHHHhcc
Q 005365 607 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCK 680 (700)
Q Consensus 607 ~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G----G~~EiI~dg~~G~lv~p~--D~eaLAeaI~~ll~~~~ 680 (700)
.+ + .+|++|.. +-+.+++|||++|+|+|+.... +.++.+++...|+.+++. ++++++++|.+++
T Consensus 83 ~~-~-~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll---- 152 (170)
T 2o6l_A 83 GH-P-KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVI---- 152 (170)
T ss_dssp TS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHH----
T ss_pred cC-C-CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHH----
Confidence 33 5 49999986 3468999999999999999764 456777788899999877 8899999999998
Q ss_pred CCHHHHHHHHHH
Q 005365 681 ADPSYWDKISLG 692 (700)
Q Consensus 681 ~dp~~~~~ms~~ 692 (700)
.|+++++++.+-
T Consensus 153 ~~~~~~~~a~~~ 164 (170)
T 2o6l_A 153 NDPSYKENVMKL 164 (170)
T ss_dssp HCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 788766665543
No 50
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.80 E-value=5.8e-08 Score=112.60 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=101.6
Q ss_pred CccccccCCchhhhchhh-HHHHHHHHhh--cC-----CCccEEEEecCChhhHHH---HHHHHHHHH----HcCCCC--
Q 005365 526 ADMSIYFPYTEEKRRLKS-FHPEIEELLY--SD-----VENKEHLKESKDLEEQAE---MKKMYSLID----QYKLNG-- 588 (700)
Q Consensus 526 ~d~~~F~g~~~~~Kgl~~-Ll~Ai~~Ll~--~~-----~~~~l~i~g~Gd~ee~~~---~~~l~~li~----~l~L~~-- 588 (700)
+..+.++.|+...||... ++..+..+.. .. ....+++.|.++...... ++.+.++++ +-..++
T Consensus 516 ~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~l 595 (796)
T 2c4m_A 516 SIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLL 595 (796)
T ss_dssp SEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTE
T ss_pred CcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCce
Confidence 334557788899999998 7888777764 22 235667777766544322 233444433 124567
Q ss_pred cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECC--
Q 005365 589 QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDP-- 662 (700)
Q Consensus 589 ~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p-- 662 (700)
+|.|+. + -+..+.+.+..+||++.+||+ +|++|++-+=||..|++.|+|-.|...|+.++ .+|||+|..
T Consensus 596 KVvFl~---n--Y~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~ 670 (796)
T 2c4m_A 596 KVVFVE---N--YNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARV 670 (796)
T ss_dssp EEEEET---T--CCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCT
T ss_pred EEEEEC---C--CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCch
Confidence 788885 2 245677777667999999999 99999999999999999999999999998765 469999987
Q ss_pred CCHHHHHH
Q 005365 663 YHGEQAAE 670 (700)
Q Consensus 663 ~D~eaLAe 670 (700)
.++.++-.
T Consensus 671 ~ev~~l~~ 678 (796)
T 2c4m_A 671 EELPALRE 678 (796)
T ss_dssp TTHHHHHH
T ss_pred hhHHHHHH
Confidence 67766654
No 51
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.68 E-value=3.6e-07 Score=106.00 Aligned_cols=139 Identities=13% Similarity=0.011 Sum_probs=100.7
Q ss_pred CCccccccCCchhhhchhh-HHHHHHHHhh---cC----CCccEEEEecCChhhHHH---HHHHHHHHH----HcCCCC-
Q 005365 525 GADMSIYFPYTEEKRRLKS-FHPEIEELLY---SD----VENKEHLKESKDLEEQAE---MKKMYSLID----QYKLNG- 588 (700)
Q Consensus 525 G~d~~~F~g~~~~~Kgl~~-Ll~Ai~~Ll~---~~----~~~~l~i~g~Gd~ee~~~---~~~l~~li~----~l~L~~- 588 (700)
.+..+.++.|+...||... ++..+..+.. .+ ....+++.|.++...... ++.+.++++ +-..++
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~ 604 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDK 604 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCc
Confidence 3345567788899999998 7777776654 21 235666777766544222 233344433 124567
Q ss_pred -cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CCeEEEECCC
Q 005365 589 -QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GKSGYHIDPY 663 (700)
Q Consensus 589 -~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~~G~lv~p~ 663 (700)
+|.|+. + -+..+.+.+..+||++.+||+ +|++|++-+=||..|++.|+|-.|...|+.++ .+|||+|..
T Consensus 605 lKVvfl~---n--Y~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~- 678 (796)
T 1l5w_A 605 LKVVFLP---D--YCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGH- 678 (796)
T ss_dssp EEEEECS---S--CCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC-
T ss_pred eEEEEEC---C--CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEecC-
Confidence 788875 2 245677777667999999999 99999999999999999999999999998765 469999987
Q ss_pred CHHHHH
Q 005365 664 HGEQAA 669 (700)
Q Consensus 664 D~eaLA 669 (700)
+++++.
T Consensus 679 ~~~ev~ 684 (796)
T 1l5w_A 679 TVEQVK 684 (796)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 777765
No 52
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=98.66 E-value=7.4e-07 Score=103.77 Aligned_cols=136 Identities=13% Similarity=0.016 Sum_probs=98.3
Q ss_pred ccccccCCchhhhchhhH-HHHHHHHh---hcCC----CccEEEEecCChhhHH---HHHHHHHHHHHcC----CCC--c
Q 005365 527 DMSIYFPYTEEKRRLKSF-HPEIEELL---YSDV----ENKEHLKESKDLEEQA---EMKKMYSLIDQYK----LNG--Q 589 (700)
Q Consensus 527 d~~~F~g~~~~~Kgl~~L-l~Ai~~Ll---~~~~----~~~l~i~g~Gd~ee~~---~~~~l~~li~~l~----L~~--~ 589 (700)
..+.|+.|+...||...+ +..+..+. ..+. ...+++.|.++..... .++.+.++++.++ +++ +
T Consensus 551 l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lK 630 (824)
T 2gj4_A 551 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLR 630 (824)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEE
T ss_pred ceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceE
Confidence 344567788889999887 77777664 2221 2367777776654422 2344555555443 356 7
Q ss_pred EEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCcccccc--cCCeEEEECCCCH
Q 005365 590 FRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHIDPYHG 665 (700)
Q Consensus 590 V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~--dg~~G~lv~p~D~ 665 (700)
|.|+. + -+..+.+.+..++|++.+||+ +|++|++-+=||..|++.|+|-.|...|+.+ .++|||+|... +
T Consensus 631 VvFl~---n--YdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~-~ 704 (824)
T 2gj4_A 631 VIFLE---N--YRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR-V 704 (824)
T ss_dssp EEEET---T--CCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC-H
T ss_pred EEEEC---C--CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCc-H
Confidence 88885 2 245677777667999999999 9999999999999999999999999888875 45699999864 5
Q ss_pred HHH
Q 005365 666 EQA 668 (700)
Q Consensus 666 eaL 668 (700)
+++
T Consensus 705 ~ev 707 (824)
T 2gj4_A 705 EDV 707 (824)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
No 53
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=97.87 E-value=0.0013 Score=73.38 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=63.3
Q ss_pred CCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccc-cCCeEEEE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIV-NGKSGYHI 660 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~-dg~~G~lv 660 (700)
++++...+ +++..+ +++. ++++||.= +=.++++||+++|+|+|+-...+ .+..+. +-..|..+
T Consensus 352 ~~~~~v~~----~~pq~~---~L~h~~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l 420 (482)
T 2pq6_A 352 ADRGLIAS----WCPQDK---VLNHPSIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI 420 (482)
T ss_dssp TTTEEEES----CCCHHH---HHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCEEEEe----ecCHHH---HhcCCCCCEEEec----CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEE
Confidence 46788887 444444 4532 13346664 23469999999999999975543 334343 44578877
Q ss_pred CC-CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 005365 661 DP-YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 697 (700)
Q Consensus 661 ~p-~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra 697 (700)
+. -++++++++|.+++ .|++ .++|+++|++..
T Consensus 421 ~~~~~~~~l~~~i~~ll----~~~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 421 DTNVKREELAKLINEVI----AGDK-GKKMKQKAMELK 453 (482)
T ss_dssp CSSCCHHHHHHHHHHHH----TSHH-HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH----cCCc-HHHHHHHHHHHH
Confidence 62 37899999999998 7886 356666665543
No 54
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=97.80 E-value=0.0025 Score=70.61 Aligned_cols=93 Identities=13% Similarity=0.078 Sum_probs=62.9
Q ss_pred CCcEEEeccccCcCChhHHHHHHHccCc--EEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccccccC-CeEEE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNG-KSGYH 659 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~~aD--vfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~EiI~dg-~~G~l 659 (700)
.+++...+ +++..++.. .++ +||.= +=-++++||+++|+|+|+-...+ .+..+++. ..|..
T Consensus 326 ~~~~~vv~----w~Pq~~vL~----h~~v~~fvtH----~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~ 393 (454)
T 3hbf_A 326 KTKGKIVA----WAPQVEILK----HSSVGVFLTH----SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVG 393 (454)
T ss_dssp TTTEEEES----SCCHHHHHH----STTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEE
T ss_pred CCceEEEe----eCCHHHHHh----hcCcCeEEec----CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEE
Confidence 46788888 555555544 477 66654 12368999999999999975433 34455553 67888
Q ss_pred ECC--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 660 IDP--YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 660 v~p--~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
++. -+.++++++|.+++ .|+ ..++|+++|++.
T Consensus 394 l~~~~~~~~~l~~av~~ll----~~~-~~~~~r~~a~~l 427 (454)
T 3hbf_A 394 VDNGVLTKESIKKALELTM----SSE-KGGIMRQKIVKL 427 (454)
T ss_dssp CGGGSCCHHHHHHHHHHHH----SSH-HHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHH----CCC-hHHHHHHHHHHH
Confidence 764 47899999999998 664 234555555443
No 55
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=97.75 E-value=0.0013 Score=72.85 Aligned_cols=94 Identities=12% Similarity=0.044 Sum_probs=64.1
Q ss_pred CCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCC----CcccccccC-CeEEEE
Q 005365 587 NGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNG-KSGYHI 660 (700)
Q Consensus 587 ~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~G----G~~EiI~dg-~~G~lv 660 (700)
.+++...+ +++.. .+++. ++|+||.= +=.++++||+++|+|+|+-... ..+..+.+. ..|..+
T Consensus 324 ~~~~~v~~----w~pq~---~vL~h~~~~~fvth----~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l 392 (456)
T 2c1x_A 324 RGYGMVVP----WAPQA---EVLAHEAVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392 (456)
T ss_dssp TTTEEEES----CCCHH---HHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCceEEec----CCCHH---HHhcCCcCCEEEec----CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe
Confidence 35788887 44443 44552 26777774 2356999999999999997543 234455555 678887
Q ss_pred CCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 005365 661 DPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 696 (700)
Q Consensus 661 ~p~--D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~r 696 (700)
+.+ +.++++++|.+++ .|++ .++|++++++.
T Consensus 393 ~~~~~~~~~l~~~i~~ll----~~~~-~~~~r~~a~~l 425 (456)
T 2c1x_A 393 EGGVFTKSGLMSCFDQIL----SQEK-GKKLRENLRAL 425 (456)
T ss_dssp GGGSCCHHHHHHHHHHHH----HSHH-HHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHH----CCCc-HHHHHHHHHHH
Confidence 643 6899999999998 6775 45666666554
No 56
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=97.74 E-value=0.0039 Score=69.14 Aligned_cols=78 Identities=18% Similarity=0.115 Sum_probs=52.6
Q ss_pred CcEEEeccccCcCChhHHHHHHHc-cCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC----cccc-cccCCeEEEE-
Q 005365 588 GQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEI-IVNGKSGYHI- 660 (700)
Q Consensus 588 ~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG----~~Ei-I~dg~~G~lv- 660 (700)
+++...+ +++..+ .++. ++|+||.= +=.++++||+++|+|+|+-...+ .+.. ++.-..|..+
T Consensus 332 ~~~~v~~----w~pq~~---vL~h~~~~~fvth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~ 400 (463)
T 2acv_A 332 GKGMICG----WAPQVE---VLAHKAIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 400 (463)
T ss_dssp CSEEEES----SCCHHH---HHHSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred CCEEEEc----cCCHHH---HhCCCccCeEEec----CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEe
Confidence 4566666 443333 3431 36777764 23479999999999999975533 3444 4565688888
Q ss_pred C---C----CCHHHHHHHHHHHH
Q 005365 661 D---P----YHGEQAAEILVDFF 676 (700)
Q Consensus 661 ~---p----~D~eaLAeaI~~ll 676 (700)
+ . -+.++++++|.+++
T Consensus 401 ~~~~~~~~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 401 VDYRKGSDVVAAEEIEKGLKDLM 423 (463)
T ss_dssp SSCCTTCCCCCHHHHHHHHHHHT
T ss_pred cccCCCCccccHHHHHHHHHHHH
Confidence 2 2 37899999999997
No 57
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=97.68 E-value=0.0039 Score=69.55 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=38.9
Q ss_pred cHHHHHHHHcCCCEEEcCCCC----ccccc-ccCCeEEEECCC-----CHHHHHHHHHHHH
Q 005365 626 GLTVVEAMTCGLPTFATCKGG----PAEII-VNGKSGYHIDPY-----HGEQAAEILVDFF 676 (700)
Q Consensus 626 Gl~vlEAMA~GlPVVAT~~GG----~~EiI-~dg~~G~lv~p~-----D~eaLAeaI~~ll 676 (700)
-++++||+++|+|+|+-...+ .+..+ +.-..|..++.. +.++++++|.+++
T Consensus 367 ~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl 427 (480)
T 2vch_A 367 WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLM 427 (480)
T ss_dssp HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHH
T ss_pred chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHh
Confidence 368999999999999975433 34443 455678777643 7899999999998
No 58
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.06 E-value=0.0048 Score=72.35 Aligned_cols=154 Identities=12% Similarity=0.019 Sum_probs=109.3
Q ss_pred ccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCC-CcEEEeccccCcCChhHHHH
Q 005365 529 SIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWISSQMNRVRNGELYR 607 (700)
Q Consensus 529 ~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~-~~V~flG~~~d~v~~~el~~ 607 (700)
.+|.-.....|=-...+....+++...|+..+++...+... .+.+++.+++.|++ ++|.|.+ +.+..+...
T Consensus 524 v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~----~~~l~~~~~~~gi~~~r~~f~~----~~~~~~~l~ 595 (723)
T 4gyw_A 524 IVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG----EPNIQQYAQNMGLPQNRIIFSP----VAPKEEHVR 595 (723)
T ss_dssp EEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG----HHHHHHHHHHTTCCGGGEEEEE----CCCHHHHHH
T ss_pred EEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH----HHHHHHHHHhcCCCcCeEEECC----CCCHHHHHH
Confidence 45544445567667788888999999999988887654332 24677788888884 7899999 566788888
Q ss_pred HHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCCcccccc-----c-CCeEEEECCCCHHHHHHHHHHHHHhccC
Q 005365 608 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV-----N-GKSGYHIDPYHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 608 ~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~-----d-g~~G~lv~p~D~eaLAeaI~~ll~~~~~ 681 (700)
.+.. +|+++=|--| +-|.|..||+.||+|||+-....+..-+. . |-.-+++ .|.++..+.-.++. .
T Consensus 596 ~~~~-~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia--~~~~~Y~~~a~~la----~ 667 (723)
T 4gyw_A 596 RGQL-ADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA--KNRQEYEDIAVKLG----T 667 (723)
T ss_dssp HGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC--SSHHHHHHHHHHHH----H
T ss_pred HhCC-CeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc--CCHHHHHHHHHHHh----c
Confidence 8886 9999988655 44789999999999999964322222111 0 1111222 37788888777776 7
Q ss_pred CHHHHHHHHHHHHHHHH
Q 005365 682 DPSYWDKISLGGLKRIE 698 (700)
Q Consensus 682 dp~~~~~ms~~ar~ra~ 698 (700)
|++.+.+++++-+++..
T Consensus 668 d~~~l~~lr~~l~~~~~ 684 (723)
T 4gyw_A 668 DLEYLKKVRGKVWKQRI 684 (723)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999998887776654
No 59
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.97 E-value=0.01 Score=62.40 Aligned_cols=89 Identities=15% Similarity=0.087 Sum_probs=53.8
Q ss_pred hhhchh--hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcC--C-CCcEEEeccccCcCChhHHHHHHHc
Q 005365 537 EKRRLK--SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYK--L-NGQFRWISSQMNRVRNGELYRYICD 611 (700)
Q Consensus 537 ~~Kgl~--~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~--L-~~~V~flG~~~d~v~~~el~~~la~ 611 (700)
+.|+.. .+.+.++.|... +..+++.|++ .+.+..+ ++.+..+ . .+.+.+.| ..+..++..+++.
T Consensus 193 ~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~--~e~~~~~---~i~~~~~~~~~~~~~~l~g----~~sl~e~~ali~~ 261 (348)
T 1psw_A 193 PAKRWPHYHYAELAKQLIDE--GYQVVLFGSA--KDHEAGN---EILAALNTEQQAWCRNLAG----ETQLDQAVILIAA 261 (348)
T ss_dssp GGGSCCHHHHHHHHHHHHHT--TCEEEECCCG--GGHHHHH---HHHTTSCHHHHTTEEECTT----TSCHHHHHHHHHT
T ss_pred ccCCCCHHHHHHHHHHHHHC--CCeEEEEeCh--hhHHHHH---HHHHhhhhccccceEeccC----cCCHHHHHHHHHh
Confidence 445544 666777766653 4556665433 3322222 2222221 0 12345667 5668999999997
Q ss_pred cCcEEEeCCCCCCccHHHHHHHHcCCCEEEc
Q 005365 612 TKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 612 ~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT 642 (700)
+|++|... .|..-+ |.|+|+|+|+-
T Consensus 262 -a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 262 -CKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp -SSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred -CCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 99999974 244334 99999999993
No 60
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=96.95 E-value=0.044 Score=56.62 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC
Q 005365 575 KKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 643 (700)
Q Consensus 575 ~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~ 643 (700)
+++++.+++. .++++.++.+ ++..+|+. ||+.|.+ -|.|+.|++++|+|.|.-.
T Consensus 198 ~~l~~~~~~~---~~v~v~~~~~------~m~~~m~~-aDlvI~~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 198 KKLQKFAKLH---NNIRLFIDHE------NIAKLMNE-SNKLIIS-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp HHHHHHHHTC---SSEEEEESCS------CHHHHHHT-EEEEEEE-----SSHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHhhC---CCEEEEeCHH------HHHHHHHH-CCEEEEC-----CcHHHHHHHHcCCCEEEEe
Confidence 4555555432 3699998654 46788886 9999995 3689999999999999864
No 61
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.85 E-value=0.061 Score=57.12 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=53.0
Q ss_pred hhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCC
Q 005365 542 KSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 621 (700)
Q Consensus 542 ~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~ 621 (700)
+.+.+.++.+... +..+++.|+. .+.+ ...++++..+ ...+.+.| ..+..|+..+++. +|++|..
T Consensus 204 ~~~~~l~~~l~~~--g~~vvl~g~~--~e~~---~~~~i~~~~~-~~~~~l~g----~~sl~e~~ali~~-a~~~i~~-- 268 (349)
T 3tov_A 204 ERFAHVADYFGRL--GYKTVFFGGP--MDLE---MVQPVVEQME-TKPIVATG----KFQLGPLAAAMNR-CNLLITN-- 268 (349)
T ss_dssp HHHHHHHHHHHHH--TCEEEECCCT--TTHH---HHHHHHHTCS-SCCEECTT----CCCHHHHHHHHHT-CSEEEEE--
T ss_pred HHHHHHHHHHHhC--CCeEEEEeCc--chHH---HHHHHHHhcc-cccEEeeC----CCCHHHHHHHHHh-CCEEEEC--
Confidence 3556666666544 4556665543 2222 2334444443 23366667 6678999999997 9999997
Q ss_pred CCCccHHHHHHHHcCCCEEEc
Q 005365 622 YEAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 622 ~E~fGl~vlEAMA~GlPVVAT 642 (700)
+ .|..-+ |.|+|+|+|+-
T Consensus 269 -D-sG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 269 -D-SGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp -S-SHHHHH-HHTTTCCEEEE
T ss_pred -C-CCHHHH-HHhcCCCEEEE
Confidence 2 255555 89999999994
No 62
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.30 E-value=1.7 Score=44.86 Aligned_cols=81 Identities=14% Similarity=0.149 Sum_probs=49.7
Q ss_pred hHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCC
Q 005365 543 SFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 622 (700)
Q Consensus 543 ~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~ 622 (700)
.+.+.++.|... +..+++.+++ ..+. +...++.+. .+ .+.+.| ..+..|+..+++. ||++|..
T Consensus 198 ~~~~l~~~L~~~--~~~vvl~~g~-~~e~---~~~~~i~~~--~~-~~~l~g----~~sl~el~ali~~-a~l~I~~--- 260 (326)
T 2gt1_A 198 HWRELIGLLADS--GIRIKLPWGA-PHEE---ERAKRLAEG--FA-YVEVLP----KMSLEGVARVLAG-AKFVVSV--- 260 (326)
T ss_dssp HHHHHHHHTTTT--CCEEEECCSS-HHHH---HHHHHHHTT--CT-TEEECC----CCCHHHHHHHHHT-CSEEEEE---
T ss_pred HHHHHHHHHHHC--CCcEEEecCC-HHHH---HHHHHHHhh--CC-cccccC----CCCHHHHHHHHHh-CCEEEec---
Confidence 555666665432 4445554333 3222 222333322 22 367777 6678999999997 9999998
Q ss_pred CCccHHHHHHHHcCCCEEEc
Q 005365 623 EAFGLTVVEAMTCGLPTFAT 642 (700)
Q Consensus 623 E~fGl~vlEAMA~GlPVVAT 642 (700)
++ |..-+ |.|+|+|+|+-
T Consensus 261 DS-G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 261 DT-GLSHL-TAALDRPNITV 278 (326)
T ss_dssp SS-HHHHH-HHHTTCCEEEE
T ss_pred CC-cHHHH-HHHcCCCEEEE
Confidence 22 55555 77799999984
No 63
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=92.73 E-value=0.27 Score=57.41 Aligned_cols=132 Identities=11% Similarity=0.028 Sum_probs=88.0
Q ss_pred CccccccCCchhhhchhh-HHHHHHHH---hhc------C-------CCccEEEEec---CChhhHHHHHHHHHHHHH--
Q 005365 526 ADMSIYFPYTEEKRRLKS-FHPEIEEL---LYS------D-------VENKEHLKES---KDLEEQAEMKKMYSLIDQ-- 583 (700)
Q Consensus 526 ~d~~~F~g~~~~~Kgl~~-Ll~Ai~~L---l~~------~-------~~~~l~i~g~---Gd~ee~~~~~~l~~li~~-- 583 (700)
.-+++|+-|+...||... ++..+..+ +.. . ....+++.|- ++...+..++.+.+.++.
T Consensus 600 sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN 679 (879)
T 1ygp_A 600 TLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVN 679 (879)
T ss_dssp CEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhc
Confidence 334567778889999877 45554433 333 1 1223333332 222233334444444442
Q ss_pred --cCCCC--cEEEeccccCcCChhHHHHHHHccCcEEEeCCC--CCCccHHHHHHHHcCCCEEEcCCCCccccccc--CC
Q 005365 584 --YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--GK 655 (700)
Q Consensus 584 --l~L~~--~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~--~E~fGl~vlEAMA~GlPVVAT~~GG~~EiI~d--g~ 655 (700)
-.+.+ +|.|+. |+ +=.+.+.+-.++|+-.+-|. .|+.|.+=+-+|.-|.++++|-.|...|+.++ ++
T Consensus 680 ~Dp~v~~~LKVVFle---nY--~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~e 754 (879)
T 1ygp_A 680 NDESIEHLLKVVFVA---DY--NVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGED 754 (879)
T ss_dssp TCGGGTTSEEEEEET---TC--CHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCGG
T ss_pred cChhhCCceEEEEeC---CC--CHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcCcc
Confidence 23456 788886 22 34566666667999999876 69999999999999999999999999999876 56
Q ss_pred eEEEECC
Q 005365 656 SGYHIDP 662 (700)
Q Consensus 656 ~G~lv~p 662 (700)
|+|+|-.
T Consensus 755 N~fiFG~ 761 (879)
T 1ygp_A 755 NVFLFGN 761 (879)
T ss_dssp GSEEESC
T ss_pred cEEEccC
Confidence 9999975
No 64
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=75.05 E-value=63 Score=31.29 Aligned_cols=157 Identities=15% Similarity=0.166 Sum_probs=98.8
Q ss_pred cccccCCchhhhchhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEecccc----------
Q 005365 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM---------- 597 (700)
Q Consensus 528 ~~~F~g~~~~~Kgl~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~---------- 597 (700)
...+.|+...-||+-.+.+--+++++. ..+-.+..+-.+.. +. -.+++.|++ ..+.|...
T Consensus 199 inrwigrtttwkgfyqmfdfhekflkp--agkstvmeglersp-af-----iaikekgip--yeyygnreidkmnlapnq 268 (401)
T 1xv5_A 199 INRWIGRTTTWKGFYQMFDFHEKFLKP--AGKSTVMEGLERSP-AF-----IAIKEKGIP--YEYYGNREIDKMNLAPNQ 268 (401)
T ss_dssp EEEEECCSCGGGCHHHHHHHHHHTTTT--TTCEEEEECCCCSH-HH-----HHHHHTTCC--EEEECGGGGGGCCCSSSC
T ss_pred hhhhhcccchhHhHHHHhhHHHHhcCc--cchhhhhhhhhcCC-ce-----EEEcccCCc--hhhcCcchhhhhcCCCCC
Confidence 456889999999998888777777643 23333333322211 11 123333443 23333110
Q ss_pred -----CcCChhHHHHHHHccCcEEEeCCC------CCCccHHHHHHHHcCCCEE-EcCCCCcccc------cccCCeE-E
Q 005365 598 -----NRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGLPTF-ATCKGGPAEI------IVNGKSG-Y 658 (700)
Q Consensus 598 -----d~v~~~el~~~la~~aDvfV~PS~------~E~fGl~vlEAMA~GlPVV-AT~~GG~~Ei------I~dg~~G-~ 658 (700)
|-.-+.|+..-+.. ++...+-|. ..+.-.+-+|--|||+-.| --..|..... +....+| +
T Consensus 269 paqildcyinsemlermsk-sgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgii 347 (401)
T 1xv5_A 269 PAQILDCYINSEMLERMSK-SGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTSHDSGII 347 (401)
T ss_dssp CEEEESCCCHHHHHHHHHT-EEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGGGSCCSCE
T ss_pred cchhhhheecHHHHHHhhh-cCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCcccccCCceE
Confidence 12236788888887 777777664 3467789999999997544 3322222111 1123355 4
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Q 005365 659 HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 699 (700)
Q Consensus 659 lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ar~ra~e 699 (700)
.++.+|-++.-+.|.++- +|..++.+-++.|.+...+
T Consensus 348 wfdendmestferikels----sdralydrerekayeflyq 384 (401)
T 1xv5_A 348 WFDENDMESTFERIKELS----SDRALYDREREKAYEFLYQ 384 (401)
T ss_dssp EECTTCHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHHH
T ss_pred EecCCchHHHHHHHHHhc----cchhhhhHHHHHHHHHHHh
Confidence 678899999999999987 8999999999999887654
No 65
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=72.91 E-value=37 Score=33.90 Aligned_cols=35 Identities=17% Similarity=0.402 Sum_probs=23.8
Q ss_pred cCCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 402 ~~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
+..+||+|.+ |. +.+...|..-+..+|+|-|....
T Consensus 83 ~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 83 MDKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp STTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 3458999988 22 22345566777788999887644
No 66
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=71.75 E-value=34 Score=34.27 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=22.6
Q ss_pred CCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 404 GKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 404 ~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
.+||+|.+ |. +.+...|..-+...|+|-|....
T Consensus 84 ~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 84 KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 48999998 22 22344566677788999887543
No 67
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=64.99 E-value=2.9 Score=41.38 Aligned_cols=73 Identities=8% Similarity=-0.027 Sum_probs=48.6
Q ss_pred cEEEeccccCcCChhHHHHHHH-ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcCCCC---c-----ccccccCCeEEE
Q 005365 589 QFRWISSQMNRVRNGELYRYIC-DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG---P-----AEIIVNGKSGYH 659 (700)
Q Consensus 589 ~V~flG~~~d~v~~~el~~~la-~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~~GG---~-----~EiI~dg~~G~l 659 (700)
++...++. +++..+|+ . ||++|.=+ =..+++|++++|+|.|.-.... . ++.+.+...++.
T Consensus 115 ~v~v~~f~------~~m~~~l~~~-AdlvIsha----GagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~ 183 (224)
T 2jzc_A 115 KVIGFDFS------TKMQSIIRDY-SDLVISHA----GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWS 183 (224)
T ss_dssp EEEECCSS------SSHHHHHHHH-CSCEEESS----CHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCE
T ss_pred eEEEeecc------chHHHHHHhc-CCEEEECC----cHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEE
Confidence 45555543 35678888 7 99999852 3579999999999999965432 1 333433334666
Q ss_pred ECCCCHHHHHHHHHHH
Q 005365 660 IDPYHGEQAAEILVDF 675 (700)
Q Consensus 660 v~p~D~eaLAeaI~~l 675 (700)
+ +++.++++|.++
T Consensus 184 ~---~~~~L~~~i~~l 196 (224)
T 2jzc_A 184 C---APTETGLIAGLR 196 (224)
T ss_dssp E---CSCTTTHHHHHH
T ss_pred c---CHHHHHHHHHHH
Confidence 6 456677777776
No 68
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=64.09 E-value=4 Score=41.29 Aligned_cols=33 Identities=15% Similarity=0.410 Sum_probs=26.0
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEecc
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
|||+|....|+.| . +|++.|.++||+|+ +++|.
T Consensus 1 MkILVTGatGfIG-----------~--------------~L~~~L~~~G~~V~----~l~R~ 33 (298)
T 4b4o_A 1 MRVLVGGGTGFIG-----------T--------------ALTQLLNARGHEVT----LVSRK 33 (298)
T ss_dssp CEEEEETTTSHHH-----------H--------------HHHHHHHHTTCEEE----EEESS
T ss_pred CEEEEECCCCHHH-----------H--------------HHHHHHHHCCCEEE----EEECC
Confidence 8998887666632 1 67788899999999 88875
No 69
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=60.51 E-value=4.1 Score=40.83 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=25.7
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
+|+|||+|... |+.| . .+++.|.++||+|. ++++..
T Consensus 3 ~m~~~ilVtGa-G~iG-----------~--------------~l~~~L~~~g~~V~----~~~r~~ 38 (286)
T 3ius_A 3 AMTGTLLSFGH-GYTA-----------R--------------VLSRALAPQGWRII----GTSRNP 38 (286)
T ss_dssp --CCEEEEETC-CHHH-----------H--------------HHHHHHGGGTCEEE----EEESCG
T ss_pred CCcCcEEEECC-cHHH-----------H--------------HHHHHHHHCCCEEE----EEEcCh
Confidence 68899998875 6522 2 56778899999999 888753
No 70
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=58.59 E-value=72 Score=31.68 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=23.5
Q ss_pred CCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 403 QGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 403 ~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
..+||+|.+ |. +.+...|..-+..+|+|-|....
T Consensus 85 ~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 85 FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 458999988 22 22345666777789999887644
No 71
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=56.01 E-value=11 Score=38.36 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=25.8
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
.|||+||..|- +.++ +..+|.+...+.|.++||+|+
T Consensus 22 ~MKiLII~aHP-----------~~~S-------~n~aL~~~~~~~l~~~G~eV~ 57 (280)
T 4gi5_A 22 SMKVLLIYAHP-----------EPRS-------LNGALKNFAIRHLQQAGHEVQ 57 (280)
T ss_dssp CCEEEEEECCS-----------CTTS-------HHHHHHHHHHHHHHHTTCEEE
T ss_pred CCeEEEEEeCC-----------CCcc-------HHHHHHHHHHHHHHHCCCeEE
Confidence 48999997663 2233 234555677888999999999
No 72
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=54.31 E-value=64 Score=32.76 Aligned_cols=14 Identities=7% Similarity=-0.081 Sum_probs=10.7
Q ss_pred HHHHHHHHCCCcee
Q 005365 316 EMLLRIKQQGLDIT 329 (700)
Q Consensus 316 eLa~~L~~~GheV~ 329 (700)
.++++|.++|+++.
T Consensus 39 ~l~~~L~~~g~~~~ 52 (346)
T 4egb_A 39 NFVHYMLQSYETYK 52 (346)
T ss_dssp HHHHHHHHHCTTEE
T ss_pred HHHHHHHhhCCCcE
Confidence 56678899997666
No 73
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=54.19 E-value=1.1e+02 Score=26.53 Aligned_cols=98 Identities=11% Similarity=0.104 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH----------ccCcEEEeCC-CCCCccHHHHHHHHc-----C
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC----------DTKGAFVQPA-LYEAFGLTVVEAMTC-----G 636 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la----------~~aDvfV~PS-~~E~fGl~vlEAMA~-----G 636 (700)
..+.+.+..++.+....|.... +..+..+.+. ...|++++=. ..+.-|+.+++.+.. +
T Consensus 16 ~~~~l~~~L~~~g~~~~v~~~~------~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ 89 (152)
T 3heb_A 16 HARLIEKNIRRAGVNNEIIAFT------DGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKENPHTRR 89 (152)
T ss_dssp HHHHHHHHHHHTTCCCCEEEES------SHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTT
T ss_pred HHHHHHHHHHhCCCcceEEEeC------CHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHhcccccC
Confidence 4566777777777654566554 2456666663 2367777643 345668888887754 6
Q ss_pred CCEEEc-CCCC---cccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 637 LPTFAT-CKGG---PAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 637 lPVVAT-~~GG---~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
+|+|.. .... ..+.+..|..+++..|-+++++.++|..+.
T Consensus 90 ~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 133 (152)
T 3heb_A 90 SPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLG 133 (152)
T ss_dssp SCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 788773 3332 234556788999999999999999998875
No 74
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=51.48 E-value=1.7e+02 Score=29.53 Aligned_cols=34 Identities=26% Similarity=0.382 Sum_probs=22.5
Q ss_pred CCCCeEEEE------cC------CCchHHHHHHHHhcCCcEEEEec
Q 005365 403 QGKPDLIIG------NY------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 403 ~~~pDlIh~------h~------~~~~lva~lla~~~giP~V~t~H 436 (700)
..+||+|.+ |. +.+...|..-+..+|+|-|....
T Consensus 82 ~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (280)
T 1l5x_A 82 GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSA 127 (280)
T ss_dssp TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEc
Confidence 348999988 22 12234566667788999887543
No 75
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=50.52 E-value=15 Score=34.91 Aligned_cols=37 Identities=11% Similarity=0.263 Sum_probs=24.0
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHH-HHHCCCcee
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLR-IKQQGLDIT 329 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~-L~~~GheV~ 329 (700)
|||||++|+.+ |..+|....+ .+.+++. +.++|++|+
T Consensus 1 mMmkilii~gS-----------~r~~g~t~~l-------a~~i~~~~l~~~g~~v~ 38 (197)
T 2vzf_A 1 MTYSIVAISGS-----------PSRNSTTAKL-------AEYALAHVLARSDSQGR 38 (197)
T ss_dssp CCEEEEEEECC-----------SSTTCHHHHH-------HHHHHHHHHHHSSEEEE
T ss_pred CCceEEEEECC-----------CCCCChHHHH-------HHHHHHHHHHHCCCeEE
Confidence 67899999633 3334533333 3356677 788899988
No 76
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=48.74 E-value=18 Score=35.51 Aligned_cols=22 Identities=9% Similarity=0.244 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEcC
Q 005365 389 TYTEDVAVEIAKELQGKPDLIIGNY 413 (700)
Q Consensus 389 ~f~~~~~~~l~~~~~~~pDlIh~h~ 413 (700)
.....+.+.+++. +||+|+.+.
T Consensus 82 ~~~~~l~~~ir~~---~P~~V~t~~ 103 (227)
T 1uan_A 82 EQRLKLAQALRRL---RPRVVFAPL 103 (227)
T ss_dssp HHHHHHHHHHHHH---CEEEEEEEC
T ss_pred HHHHHHHHHHHHh---CCCEEEeCC
Confidence 3445566666666 899988865
No 77
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=47.58 E-value=20 Score=34.66 Aligned_cols=39 Identities=10% Similarity=0.086 Sum_probs=24.3
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHC--CCcee
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ--GLDIT 329 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~--GheV~ 329 (700)
|||||++|..|-.| ..++.. ++|.+.+.+.+.++ |++|+
T Consensus 3 mM~kiLiI~gSpr~---------~~~S~s-------~~l~~~~~~~~~~~~~g~ev~ 43 (211)
T 3p0r_A 3 AMTKVLFVKANNRP---------AEQAVS-------VKLYEAFLASYKEAHPNDTVV 43 (211)
T ss_dssp -CCEEEEEECCCSC---------TTTCHH-------HHHHHHHHHHHHHHCTTSEEE
T ss_pred ccCEEEEEEeCCCC---------CCCCHH-------HHHHHHHHHHHHHhCCCCeEE
Confidence 78999999754321 124432 33444667778877 89998
No 78
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=46.55 E-value=1.4e+02 Score=25.48 Aligned_cols=100 Identities=11% Similarity=0.120 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCC-CCCCccHHHHHHHHc-----CCCEEEc-CC
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPA-LYEAFGLTVVEAMTC-----GLPTFAT-CK 644 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS-~~E~fGl~vlEAMA~-----GlPVVAT-~~ 644 (700)
....+....++.+....|.... +..+....+.. ..|++++=. ..+.-|+.+++.+.. ++|+|.. ..
T Consensus 17 ~~~~l~~~L~~~~~~~~v~~~~------~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 17 DIALIRRVLDRKDIHCQLEFVD------NGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHHHHHHHTTCCEEEEEES------SHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHHHHHHHhcCCCeeEEEEC------CHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 4456677777766543344433 23556665543 256666643 345567888888764 6888874 32
Q ss_pred CC---cccccccCCeEEEECCC-CHHHHHHHHHHHHHh
Q 005365 645 GG---PAEIIVNGKSGYHIDPY-HGEQAAEILVDFFEK 678 (700)
Q Consensus 645 GG---~~EiI~dg~~G~lv~p~-D~eaLAeaI~~ll~~ 678 (700)
.. ..+.+..|..+++..|. +++++.++|..++++
T Consensus 91 ~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 91 VSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp CCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHHHHH
Confidence 22 23455678899999999 999999999998843
No 79
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=45.33 E-value=3e+02 Score=31.41 Aligned_cols=226 Identities=11% Similarity=0.001 Sum_probs=111.8
Q ss_pred CeEEEEcCCCchHHHHHHHHhcCCcEEEEecCCccccCCCCchhhh----hcccccchhhhhhHHHHHHhhCCEEEecCH
Q 005365 406 PDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWK----NLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (700)
Q Consensus 406 pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l~~~~~~~~~~~w~----~~~~~y~~~~~~~~E~~al~~AD~IIt~S~ 481 (700)
.++++.+..... .+.++.+..+|.+.|+....+.. .+..-. .....|. .. -....+..|.++++|+
T Consensus 418 a~~~v~n~~~~~----~~~k~~~~~~iq~wHG~~lK~~g-~d~~~~~~~~~~~~~~~--~~---~~~~~~~~D~~~~~s~ 487 (729)
T 3l7i_A 418 ASHWVSNARTPL----YLNKKENQTYIQTWHGTPLKRLA-NDMKVVRMPGTTTPKYK--RN---FNRETSRWDYLISPNR 487 (729)
T ss_dssp EEEEEESSCCCT----TSCCCTTCEEEECCSSCCSBCCG-GGCSCCCCTTCCHHHHH--HH---HHHHHTTCSEEEESSH
T ss_pred CcEEEECCCCcc----ccccCCCcEEEECCCCCchhhcc-ccccccccccccCHHHH--HH---HHHhhccCCEEEeCCH
Confidence 466777654432 23345577889999997322211 000000 0000010 00 1123567899999998
Q ss_pred HHHHhhhhhhccccccccccCCCeEEeecCCCCCCCcc---------------eecCCCCccccccCCchhhh----c--
Q 005365 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKF---------------NIVSPGADMSIYFPYTEEKR----R-- 540 (700)
Q Consensus 482 ~~~~~~k~~~~~y~~~~~~~~p~l~~v~nGId~~~~k~---------------~vIp~G~d~~~F~g~~~~~K----g-- 540 (700)
...+.+++.++- +.-..+.-|.+-++.-+ --++++...++|.|.-.... +
T Consensus 488 ~~~~~~~~~f~~---------~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~kk~ILyaPT~r~~~~~~~~~~ 558 (729)
T 3l7i_A 488 YSTEIFRSAFWM---------DEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDKKVIMYAPTWRDDEFVSKGKY 558 (729)
T ss_dssp HHHHHHHHHTCC---------CGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSCEEEEECCCCCGGGCCGGGSS
T ss_pred HHHHHHHHHhCC---------CcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCCeEEEEeeeeeCCcccccccc
Confidence 876655554442 11112333443111000 01245667788888654431 1
Q ss_pred ---hhhHHHHHHHHhhcCCCccEEEEecCChhhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEE
Q 005365 541 ---LKSFHPEIEELLYSDVENKEHLKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFV 617 (700)
Q Consensus 541 ---l~~Ll~Ai~~Ll~~~~~~~l~i~g~Gd~ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV 617 (700)
+..-++.+.+.+. .+ ..++...-.- +.......+..+.+.... +..++..++.. +|++|
T Consensus 559 ~~~~~~~~~~l~~~l~--~~--~~li~r~Hp~-------~~~~~~~~~~~~~~~~~~------~~~di~~ll~~-aD~lI 620 (729)
T 3l7i_A 559 LFELKIDLDNLYKELG--DD--YVILLRMHYL-------ISNALDLSGYENFAIDVS------NYNDVSELFLI-SDCLI 620 (729)
T ss_dssp CCCCTTCHHHHHHHHT--TT--EEEEECCCHH-------HHTTCCCTTCTTTEEECT------TCSCHHHHHHT-CSEEE
T ss_pred ccchhhHHHHHHHHcC--CC--eEEEEecCcc-------hhccccccccCCcEEeCC------CCcCHHHHHHH-hCEEE
Confidence 1122344444332 22 3333333221 111111112344444443 12356777775 99999
Q ss_pred eCCCCCCccHHHHHHHHcCCCEEEcC----------CCCcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 618 QPALYEAFGLTVVEAMTCGLPTFATC----------KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 618 ~PS~~E~fGl~vlEAMA~GlPVVAT~----------~GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
.= ++-++.|++..++|||-.. .|-.-++ .+..-|-++. +.++|.++|....
T Consensus 621 TD-----ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~-~~~~pg~~~~--~~~eL~~~i~~~~ 681 (729)
T 3l7i_A 621 TD-----YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNY-MEDLPGPIYT--EPYGLAKELKNLD 681 (729)
T ss_dssp ES-----SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCT-TSSSSSCEES--SHHHHHHHHTTHH
T ss_pred ee-----chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccCh-hHhCCCCeEC--CHHHHHHHHhhhh
Confidence 76 6789999999999999752 1111121 1122344444 7889998887765
No 80
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=44.91 E-value=13 Score=37.62 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=25.4
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEecc
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
|+|||+|....|+. .. .+++.|.++|++|. ++++.
T Consensus 1 M~~~vlVtGatG~i--------------G~-----------~l~~~L~~~g~~V~----~~~r~ 35 (311)
T 3m2p_A 1 MSLKIAVTGGTGFL--------------GQ-----------YVVESIKNDGNTPI----ILTRS 35 (311)
T ss_dssp -CCEEEEETTTSHH--------------HH-----------HHHHHHHHTTCEEE----EEESC
T ss_pred CCCEEEEECCCcHH--------------HH-----------HHHHHHHhCCCEEE----EEeCC
Confidence 67899888655542 11 56678899999998 88876
No 81
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=43.80 E-value=44 Score=33.05 Aligned_cols=22 Identities=27% Similarity=0.567 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEcC
Q 005365 389 TYTEDVAVEIAKELQGKPDLIIGNY 413 (700)
Q Consensus 389 ~f~~~~~~~l~~~~~~~pDlIh~h~ 413 (700)
.....+.+.+++. +||+|+.++
T Consensus 84 ~~~~~l~~~ir~~---~PdvV~t~~ 105 (242)
T 2ixd_A 84 EYIREIVKVIRTY---KPKLVFAPY 105 (242)
T ss_dssp HHHHHHHHHHHHH---CCSEEEEEC
T ss_pred HHHHHHHHHHHHc---CCCEEEECC
Confidence 3445566666666 899999865
No 82
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=42.99 E-value=73 Score=32.85 Aligned_cols=20 Identities=15% Similarity=0.149 Sum_probs=15.8
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.+++.|.++|++|. ++++..
T Consensus 39 ~l~~~L~~~g~~V~----~~~r~~ 58 (375)
T 1t2a_A 39 YLAEFLLEKGYEVH----GIVRRS 58 (375)
T ss_dssp HHHHHHHHTTCEEE----EEECCC
T ss_pred HHHHHHHHCCCEEE----EEECCc
Confidence 56677889999998 887754
No 83
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=42.54 E-value=25 Score=35.74 Aligned_cols=38 Identities=8% Similarity=-0.001 Sum_probs=24.9
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
.++|||++|+.+ |..+|.... |.+.+++.+.+.|++|+
T Consensus 56 ~~~mKILiI~GS-----------~R~~S~T~~-------La~~~~~~l~~~G~eve 93 (279)
T 2fzv_A 56 APPVRILLLYGS-----------LRARSFSRL-------AVEEAARLLQFFGAETR 93 (279)
T ss_dssp CSCCEEEEEESC-----------CSSSCHHHH-------HHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEEEeC-----------CCCCCHHHH-------HHHHHHHHHhhCCCEEE
Confidence 457899999733 333554333 33356677788999998
No 84
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=42.35 E-value=2e+02 Score=28.57 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=22.7
Q ss_pred CCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 404 GKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 404 ~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
.+||+|.+ |. +.+...|..-+..+|+|-|....
T Consensus 84 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 84 KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 38999988 22 23344666777889999887543
No 85
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=42.09 E-value=1.5e+02 Score=24.69 Aligned_cols=99 Identities=10% Similarity=0.043 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc--------cCcEEEeCC-CCCCccHHHHHHHH-----cCCC
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD--------TKGAFVQPA-LYEAFGLTVVEAMT-----CGLP 638 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~--------~aDvfV~PS-~~E~fGl~vlEAMA-----~GlP 638 (700)
..+.+.+..++.|....|.... +..+....+.. ..|++++=. ..+.-|+.+++.+. ..+|
T Consensus 14 ~~~~l~~~L~~~~~~~~v~~~~------~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~p 87 (140)
T 1k68_A 14 DIRLIQEALANSTVPHEVVTVR------DGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIP 87 (140)
T ss_dssp HHHHHHHHHHTCSSCCEEEEEC------SHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSC
T ss_pred HHHHHHHHHHhcCCCceEEEEC------CHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCccccccc
Confidence 3456667777665543455543 24566676653 467777643 33456777777765 4678
Q ss_pred EEEc-CCCC---cccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 005365 639 TFAT-CKGG---PAEIIVNGKSGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 639 VVAT-~~GG---~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
+|.. .... ..+.+..|..|++..|-+++++.+.|..+++
T Consensus 88 ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 88 VVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp EEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred EEEEecCCcHHHHHHHHHhchhheecCCCCHHHHHHHHHHHHH
Confidence 8763 3332 3444557889999999999999999998873
No 86
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=42.08 E-value=1.6e+02 Score=24.93 Aligned_cols=99 Identities=10% Similarity=0.158 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH-----------ccCcEEEeCC-CCCCccHHHHHHHH-----c
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC-----------DTKGAFVQPA-LYEAFGLTVVEAMT-----C 635 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la-----------~~aDvfV~PS-~~E~fGl~vlEAMA-----~ 635 (700)
....+....++.+....|.... +..+....+. ...|++++=. ..+.-|+.+++.+. .
T Consensus 18 ~~~~l~~~L~~~g~~~~v~~~~------~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ 91 (149)
T 1k66_A 18 DFSTFQRLLQREGVVNPIYRCI------TGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQDEVLK 91 (149)
T ss_dssp HHHHHHHHHHHTTBCSCEEEEC------SHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTTSTTGG
T ss_pred HHHHHHHHHHHcCCCceEEEEC------CHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHHHhCcccC
Confidence 3456677777766543455543 2456666665 2467777643 33456777888775 4
Q ss_pred CCCEEEc-CCCC---cccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 005365 636 GLPTFAT-CKGG---PAEIIVNGKSGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 636 GlPVVAT-~~GG---~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
.+|+|.. .... ..+.+..|..+++..|-+.+++.+.|..+++
T Consensus 92 ~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~ 137 (149)
T 1k66_A 92 KIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFIK 137 (149)
T ss_dssp GSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHH
Confidence 6787763 3332 2344557889999999999999999998873
No 87
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=41.24 E-value=28 Score=31.10 Aligned_cols=64 Identities=20% Similarity=0.337 Sum_probs=44.2
Q ss_pred CcEEEeC-CCCCCccHHHHHHHH-----cCCCEEE-cCCCCcc---cccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 613 KGAFVQP-ALYEAFGLTVVEAMT-----CGLPTFA-TCKGGPA---EIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 613 aDvfV~P-S~~E~fGl~vlEAMA-----~GlPVVA-T~~GG~~---EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
-|+.++= ...+--|+.+++.+- ..+|||. |..+... +..+.|.++|+..|-++++|.++|.+++
T Consensus 58 ~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l 131 (134)
T 3to5_A 58 FDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIF 131 (134)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHC
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence 4555552 122445777777663 4688886 5544433 3345788999999999999999999886
No 88
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=41.02 E-value=75 Score=31.90 Aligned_cols=36 Identities=6% Similarity=0.116 Sum_probs=25.0
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
|||++-...|+.. ..+. .|.+.|++ +|+|. |+.+..
T Consensus 12 m~ILlTNDDGi~a--------------pGi~--------aL~~~l~~-~~~V~----VVAP~~ 47 (261)
T 3ty2_A 12 LRLLLSNDDGVYA--------------KGLA--------ILAKTLAD-LGEVD----VVAPDR 47 (261)
T ss_dssp CEEEEECSSCTTC--------------HHHH--------HHHHHHTT-TSEEE----EEEESS
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHh-cCCEE----EEecCC
Confidence 8999999888743 2344 44555666 78999 888653
No 89
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=40.87 E-value=28 Score=35.04 Aligned_cols=37 Identities=14% Similarity=0.270 Sum_probs=25.0
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
|||||++|..|. ..+|. .++|.+.+++.+.+.|++|+
T Consensus 1 ~MmkiLiI~gSp-----------r~~s~-------t~~la~~~~~~l~~~g~eV~ 37 (273)
T 1d4a_A 1 VGRRALIVLAHS-----------ERTSF-------NYAMKEAAAAALKKKGWEVV 37 (273)
T ss_dssp CCCEEEEEECCS-----------CTTSH-------HHHHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEEeCC-----------CCccH-------HHHHHHHHHHHHHhCCCeEE
Confidence 468999997553 22342 33444567778888999998
No 90
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=38.74 E-value=1.8e+02 Score=24.49 Aligned_cols=93 Identities=6% Similarity=-0.010 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCCCCCCccHHHHHHHH--c-CCCEEEc-CCCC-
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMT--C-GLPTFAT-CKGG- 646 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS~~E~fGl~vlEAMA--~-GlPVVAT-~~GG- 646 (700)
....+...++..|. .|.... +..+....+.. ..|++++| +.-|+.+++.+. . .+|+|.. ....
T Consensus 30 ~~~~l~~~L~~~g~--~v~~~~------~~~~al~~l~~~~~dlvi~~---~~~g~~~~~~l~~~~~~~~ii~ls~~~~~ 98 (137)
T 2pln_A 30 LGGEIEKGLNVKGF--MADVTE------SLEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVVLVSSDNPTS 98 (137)
T ss_dssp HHHHHHHHHHHTTC--EEEEES------CHHHHHHHHHHSCCSEEEEC---STTHHHHHHHHHHHSTTSEEEEEESSCCH
T ss_pred HHHHHHHHHHHcCc--EEEEeC------CHHHHHHHHHcCCCCEEEEc---CccHHHHHHHHHhcCCCccEEEEeCCCCH
Confidence 34556666666553 344332 23455555542 35777733 344666666664 3 7888773 3332
Q ss_pred --cccccccCCeEEEECCC-CHHHHHHHHHHHH
Q 005365 647 --PAEIIVNGKSGYHIDPY-HGEQAAEILVDFF 676 (700)
Q Consensus 647 --~~EiI~dg~~G~lv~p~-D~eaLAeaI~~ll 676 (700)
..+.+..|..+++..|- +.+++.++|..++
T Consensus 99 ~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~ 131 (137)
T 2pln_A 99 EEEVHAFEQGADDYIAKPYRSIKALVARIEARL 131 (137)
T ss_dssp HHHHHHHHTTCSEEEESSCSCHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCceeeeCCCCCHHHHHHHHHHHH
Confidence 34455678899999999 9999999998876
No 91
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=38.60 E-value=1.7e+02 Score=30.23 Aligned_cols=18 Identities=17% Similarity=0.521 Sum_probs=14.0
Q ss_pred HHHHHHHHCCCceeeccEEEec
Q 005365 316 EMLLRIKQQGLDITPQILIITR 337 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~ 337 (700)
++++++++.|++|. ++..
T Consensus 25 ~~~~a~~~~G~~v~----~~~~ 42 (391)
T 1kjq_A 25 EVAIECQRLGVEVI----AVDR 42 (391)
T ss_dssp HHHHHHHTTTCEEE----EEES
T ss_pred HHHHHHHHcCCEEE----EEEC
Confidence 56778899999987 6653
No 92
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=37.38 E-value=27 Score=32.60 Aligned_cols=33 Identities=24% Similarity=0.444 Sum_probs=24.5
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
|..|||+|=|.|. |. .|-+.+.+.|.++||+|.
T Consensus 19 ~~~MkIaIgsDha--------------G~---------~lK~~i~~~L~~~G~eV~ 51 (166)
T 3s5p_A 19 PGSMKVAFASDHG--------------GR---------DLRMFLQQRASAHGYEVM 51 (166)
T ss_dssp CTTCEEEEEECGG--------------GH---------HHHHHHHHHHHHTTCEEE
T ss_pred CCceEEEEEECch--------------HH---------HHHHHHHHHHHHCCCEEE
Confidence 5568999999985 32 122367778999999997
No 93
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=37.27 E-value=25 Score=32.98 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=23.0
Q ss_pred CCCcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 272 RIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 272 ~~pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
++.+.|||+|-|.|. |.+ |-+.|.+.|.++||+|.
T Consensus 16 ~~~~~MkIaIgsDha--------------G~~---------lK~~i~~~L~~~G~eV~ 50 (169)
T 3ph3_A 16 PRGSHMKIGIGSDHG--------------GYN---------LKREIADFLKKRGYEVI 50 (169)
T ss_dssp -----CEEEEEECGG--------------GHH---------HHHHHHHHHHHTTCEEE
T ss_pred ccCCCCEEEEEeCch--------------HHH---------HHHHHHHHHHHCCCEEE
Confidence 456779999999985 322 23367788999999997
No 94
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=36.74 E-value=22 Score=33.55 Aligned_cols=19 Identities=32% Similarity=0.475 Sum_probs=15.6
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++.|.++||+|. +++|.
T Consensus 15 ~l~~~L~~~g~~V~----~~~R~ 33 (221)
T 3ew7_A 15 RILEEAKNRGHEVT----AIVRN 33 (221)
T ss_dssp HHHHHHHHTTCEEE----EEESC
T ss_pred HHHHHHHhCCCEEE----EEEcC
Confidence 56677899999999 88875
No 95
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=36.11 E-value=1.1e+02 Score=25.49 Aligned_cols=76 Identities=7% Similarity=0.042 Sum_probs=48.7
Q ss_pred hHHHHHHHc-cCcEEEeC-CCCCCccHHHHHHHHc-----CCCEEEc-CC--CCcccccccCCeEEEECCCCHHHHHHHH
Q 005365 603 GELYRYICD-TKGAFVQP-ALYEAFGLTVVEAMTC-----GLPTFAT-CK--GGPAEIIVNGKSGYHIDPYHGEQAAEIL 672 (700)
Q Consensus 603 ~el~~~la~-~aDvfV~P-S~~E~fGl~vlEAMA~-----GlPVVAT-~~--GG~~EiI~dg~~G~lv~p~D~eaLAeaI 672 (700)
.+....+.. ..|++++- ...+.-|+.+++.+.. ++|+|.. .. ....+.+..|..+++..|-+++++.++|
T Consensus 37 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i 116 (133)
T 3nhm_A 37 ASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIAQL 116 (133)
T ss_dssp HHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHHHH
Confidence 444444432 35666664 3345567777777654 6788773 22 1224556678889999999999999999
Q ss_pred HHHHHh
Q 005365 673 VDFFEK 678 (700)
Q Consensus 673 ~~ll~~ 678 (700)
..++++
T Consensus 117 ~~~l~~ 122 (133)
T 3nhm_A 117 HALLAR 122 (133)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999843
No 96
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=35.77 E-value=19 Score=36.97 Aligned_cols=19 Identities=11% Similarity=0.149 Sum_probs=15.2
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
-++..|++.||+|+ ++++.
T Consensus 16 ~~a~~L~~~g~~V~----~~~r~ 34 (320)
T 3i83_A 16 FYGALLAKTGHCVS----VVSRS 34 (320)
T ss_dssp HHHHHHHHTTCEEE----EECST
T ss_pred HHHHHHHhCCCeEE----EEeCC
Confidence 45667899999999 88764
No 97
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=35.52 E-value=56 Score=32.38 Aligned_cols=47 Identities=13% Similarity=0.046 Sum_probs=28.3
Q ss_pred chhhhhcCCC-cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 265 TLETFLGRIP-MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 265 ~~~~~~~~~p-m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
..+.|-..-+ ++|||++|+.+ |..+|.... |.+.+++.+.+.|++|+
T Consensus 22 ~~~~~~~~~~~~~mkIliI~GS-----------~r~~s~t~~-------La~~~~~~l~~~g~eve 69 (247)
T 2q62_A 22 DSASLRPAFSTHRPRILILYGS-----------LRTVSYSRL-------LAEEARRLLEFFGAEVK 69 (247)
T ss_dssp CGGGGCCCCCCSCCEEEEEECC-----------CCSSCHHHH-------HHHHHHHHHHHTTCEEE
T ss_pred ChhhhhhhccCCCCeEEEEEcc-----------CCCCCHHHH-------HHHHHHHHHhhCCCEEE
Confidence 3445544444 35899999743 333454332 33356667788999998
No 98
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=35.02 E-value=24 Score=33.44 Aligned_cols=19 Identities=11% Similarity=0.363 Sum_probs=15.5
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.++++|.++|++|. +++|.
T Consensus 15 ~l~~~L~~~g~~V~----~~~R~ 33 (224)
T 3h2s_A 15 AIVAEARRRGHEVL----AVVRD 33 (224)
T ss_dssp HHHHHHHHTTCEEE----EEESC
T ss_pred HHHHHHHHCCCEEE----EEEec
Confidence 56677899999998 88775
No 99
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=34.72 E-value=28 Score=32.49 Aligned_cols=30 Identities=23% Similarity=0.406 Sum_probs=23.0
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
|||+|-|.|. |. +|-+.+.+.|.++||+|.
T Consensus 4 MkIaigsDha--------------G~---------~lK~~i~~~L~~~G~eV~ 33 (162)
T 2vvp_A 4 MRVYLGADHA--------------GY---------ELKQRIIEHLKQTGHEPI 33 (162)
T ss_dssp CEEEEEECHH--------------HH---------HHHHHHHHHHHHTTCEEE
T ss_pred CEEEEEeCch--------------hH---------HHHHHHHHHHHHCCCEEE
Confidence 8999999886 22 223367788999999988
No 100
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=33.60 E-value=53 Score=28.04 Aligned_cols=35 Identities=14% Similarity=0.321 Sum_probs=23.6
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
|..|||+++|..|. |.. .+. +.|-+.+.+.|++++
T Consensus 2 ~~~mkIlvvC~~G~-------------~TS-ll~-------~kl~~~~~~~gi~~~ 36 (109)
T 2l2q_A 2 PGSMNILLVCGAGM-------------STS-MLV-------QRIEKYAKSKNINAT 36 (109)
T ss_dssp CCCEEEEEESSSSC-------------SSC-HHH-------HHHHHHHHHHTCSEE
T ss_pred CCceEEEEECCChH-------------hHH-HHH-------HHHHHHHHHCCCCeE
Confidence 33589999997664 333 222 256677889999887
No 101
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=33.50 E-value=1.5e+02 Score=29.51 Aligned_cols=35 Identities=20% Similarity=0.523 Sum_probs=22.6
Q ss_pred cCCCCeEEEE--cC---------CCchHHHHHHHHhcCCcEEEEec
Q 005365 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (700)
Q Consensus 402 ~~~~pDlIh~--h~---------~~~~lva~lla~~~giP~V~t~H 436 (700)
+..+||+|.+ |. +.+...|..-+..+|+|-|....
T Consensus 81 l~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 81 MRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp SSSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred cCCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 4458999988 22 22334555566678999887544
No 102
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=33.20 E-value=29 Score=35.23 Aligned_cols=20 Identities=25% Similarity=0.351 Sum_probs=15.8
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.+++.|.++||+|. ++++..
T Consensus 28 ~l~~~L~~~g~~V~----~~~r~~ 47 (342)
T 2x4g_A 28 HAARAIRAAGHDLV----LIHRPS 47 (342)
T ss_dssp HHHHHHHHTTCEEE----EEECTT
T ss_pred HHHHHHHHCCCEEE----EEecCh
Confidence 56677889999998 888753
No 103
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=32.95 E-value=23 Score=36.19 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=15.1
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
-++..|++.||+|+ ++++.
T Consensus 16 ~~a~~L~~~g~~V~----~~~r~ 34 (312)
T 3hn2_A 16 YYGALLQRSGEDVH----FLLRR 34 (312)
T ss_dssp HHHHHHHHTSCCEE----EECST
T ss_pred HHHHHHHHCCCeEE----EEEcC
Confidence 35667899999999 88764
No 104
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=32.53 E-value=2.3e+02 Score=23.95 Aligned_cols=97 Identities=11% Similarity=0.088 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc--cCcEEEeCCC-CC-CccHHHHHHHH--cCCCEEEc-CCC
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD--TKGAFVQPAL-YE-AFGLTVVEAMT--CGLPTFAT-CKG 645 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~--~aDvfV~PS~-~E-~fGl~vlEAMA--~GlPVVAT-~~G 645 (700)
....+....++.|. .|.... +..+....+.. ..|++++-.. .+ .-|+.+++.+. ..+|+|.. ...
T Consensus 17 ~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 88 (140)
T 3h5i_A 17 QAKTIANILNKYGY--TVEIAL------TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHT 88 (140)
T ss_dssp HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSS
T ss_pred HHHHHHHHHHHcCC--EEEEec------ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCC
Confidence 44566677776653 244332 24566666643 3577776433 23 55777776654 47888873 322
Q ss_pred ---CcccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 005365 646 ---GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 646 ---G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
...+.+..|..+|+..|-+++++.++|..+++
T Consensus 89 ~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~ 123 (140)
T 3h5i_A 89 EPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALR 123 (140)
T ss_dssp SCCCCGGGGGSCEEEEEETTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 33455667889999999999999999999873
No 105
>2dvz_A BUGE, putative exported protein; periplamsic binding proteins, carboxylate binding, glutamate, transport protein; HET: GLU; 2.30A {Bordetella pertussis}
Probab=32.02 E-value=3.9e+02 Score=27.11 Aligned_cols=102 Identities=9% Similarity=-0.052 Sum_probs=62.8
Q ss_pred HHHHcCCCC-cEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC-EEEc----------CCC--
Q 005365 580 LIDQYKLNG-QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP-TFAT----------CKG-- 645 (700)
Q Consensus 580 li~~l~L~~-~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP-VVAT----------~~G-- 645 (700)
+.+..|+.- +|-|-| ..+.+..++....|+++... -.+.+....|.- +++. ++.
T Consensus 162 l~~~~Gi~~~~Vpy~G------~~~a~~al~~G~vD~~~~~~------~~~~~~i~~g~lr~Lav~~~~r~~~~pdvPt~ 229 (314)
T 2dvz_A 162 FKMATGTDIVHVPYKG------SGPAVADAVGGQIELIFDNL------PSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTF 229 (314)
T ss_dssp HHHHHTCCCEEEECSS------HHHHHHHHHHTSSSEEEEEH------HHHHHHHHTTSSEEEEEESSSCCGGGTTSCBT
T ss_pred HHHHhCCCeEEcccCC------HHHHHHHHHcCCceEEEEcH------HHHHHHHHcCCEEEEEecCccccccCCCCCCH
Confidence 344556642 344443 13566677777788877652 245666666743 3331 111
Q ss_pred ---CcccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 646 ---GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 646 ---G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
|...+....-.|+.++.+.++++.++|.+.+.+..+||+..+.+.+.+
T Consensus 230 ~e~G~~~~~~~~w~gl~ap~g~p~~vv~~l~~al~~~~~~p~~~~~~~~~g 280 (314)
T 2dvz_A 230 ADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQG 280 (314)
T ss_dssp TTTTCGGGCCCEEEEEEEETTCCHHHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HhcCCCceEEeEEEEEEEcCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHCC
Confidence 121221122368889998888999998888888889999988887654
No 106
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=31.34 E-value=19 Score=36.51 Aligned_cols=19 Identities=21% Similarity=0.228 Sum_probs=15.0
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
-++..|++.|++|+ ++++.
T Consensus 16 ~~a~~L~~~g~~V~----~~~r~ 34 (294)
T 3g17_A 16 TIAYELQQSLPHTT----LIGRH 34 (294)
T ss_dssp HHHHHHHHHCTTCE----EEESS
T ss_pred HHHHHHHHCCCeEE----EEEec
Confidence 35567788999999 88875
No 107
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=31.34 E-value=81 Score=27.07 Aligned_cols=77 Identities=9% Similarity=0.153 Sum_probs=50.9
Q ss_pred hHHHHHHHc-cCcEEEeC-CCCCCccHHHHHHHHc-----CCCEEE-cCCCCc---ccccccCCeEEEECCCCHHHHHHH
Q 005365 603 GELYRYICD-TKGAFVQP-ALYEAFGLTVVEAMTC-----GLPTFA-TCKGGP---AEIIVNGKSGYHIDPYHGEQAAEI 671 (700)
Q Consensus 603 ~el~~~la~-~aDvfV~P-S~~E~fGl~vlEAMA~-----GlPVVA-T~~GG~---~EiI~dg~~G~lv~p~D~eaLAea 671 (700)
.+....+.. ..|++++= ...+.-|+.+++.+.. .+|||. |..... .+.+..|..+++..|.+++++.++
T Consensus 42 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~ 121 (147)
T 2zay_A 42 IEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSAR 121 (147)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHH
Confidence 444444432 25666653 2334567778887764 678776 343332 333557889999999999999999
Q ss_pred HHHHHHhc
Q 005365 672 LVDFFEKC 679 (700)
Q Consensus 672 I~~ll~~~ 679 (700)
|..++.+.
T Consensus 122 i~~~~~~~ 129 (147)
T 2zay_A 122 IKRVLKLL 129 (147)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988543
No 108
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=31.03 E-value=14 Score=36.79 Aligned_cols=18 Identities=11% Similarity=0.237 Sum_probs=14.5
Q ss_pred HHHHHHHHCCCceeeccEEEec
Q 005365 316 EMLLRIKQQGLDITPQILIITR 337 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~ 337 (700)
.+++.|.++||+|. ++++
T Consensus 20 ~l~~~L~~~g~~V~----~~~r 37 (287)
T 3sc6_A 20 QLQEELNPEEYDIY----PFDK 37 (287)
T ss_dssp HHHHHSCTTTEEEE----EECT
T ss_pred HHHHHHHhCCCEEE----Eecc
Confidence 56677889999998 8776
No 109
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=30.69 E-value=33 Score=31.75 Aligned_cols=20 Identities=25% Similarity=0.385 Sum_probs=15.9
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.+++.|.++|++|. ++++..
T Consensus 18 ~l~~~l~~~g~~V~----~~~r~~ 37 (206)
T 1hdo_A 18 TTLAQAVQAGYEVT----VLVRDS 37 (206)
T ss_dssp HHHHHHHHTTCEEE----EEESCG
T ss_pred HHHHHHHHCCCeEE----EEEeCh
Confidence 56677899999998 888753
No 110
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=30.36 E-value=1.1e+02 Score=25.89 Aligned_cols=74 Identities=9% Similarity=0.102 Sum_probs=44.7
Q ss_pred hHHHHHHHc-cCcEEEeCC-CCCCccHHHHHHHH-----cCCCEEEc-C---CCCcccccccCCeEEEECCCCHHHHHHH
Q 005365 603 GELYRYICD-TKGAFVQPA-LYEAFGLTVVEAMT-----CGLPTFAT-C---KGGPAEIIVNGKSGYHIDPYHGEQAAEI 671 (700)
Q Consensus 603 ~el~~~la~-~aDvfV~PS-~~E~fGl~vlEAMA-----~GlPVVAT-~---~GG~~EiI~dg~~G~lv~p~D~eaLAea 671 (700)
.+..+.+.. ..|++++-. ..+.-|+.+++.+. .++|+|.. . .....+.+..|..+++..|.+++++.++
T Consensus 36 ~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 115 (140)
T 3n53_A 36 KEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLSR 115 (140)
T ss_dssp HHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHHHH
Confidence 444444432 246655532 33444666666664 56788763 3 2334455667889999999999999999
Q ss_pred HHHHH
Q 005365 672 LVDFF 676 (700)
Q Consensus 672 I~~ll 676 (700)
|..++
T Consensus 116 i~~~~ 120 (140)
T 3n53_A 116 IEIHL 120 (140)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99987
No 111
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=30.29 E-value=32 Score=34.45 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=16.5
Q ss_pred HHHHHHHHCCCceeeccEEEeccCC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLLP 340 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~p 340 (700)
.+++.|.++||+|. ++++...
T Consensus 22 ~l~~~L~~~g~~V~----~~~r~~~ 42 (321)
T 3vps_A 22 HLARALVASGEEVT----VLDDLRV 42 (321)
T ss_dssp HHHHHHHHTTCCEE----EECCCSS
T ss_pred HHHHHHHHCCCEEE----EEecCCc
Confidence 56677899999998 8877643
No 112
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=29.70 E-value=33 Score=33.89 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=24.5
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEec
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITR 337 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~ 337 (700)
|..|||+||.. ...|+ .|+..|++.||+|. .+.+
T Consensus 4 ~~~mkI~IIG~------------G~~G~--------------sLA~~L~~~G~~V~----~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDD------------GSSTV--------------NMAEKLDSVGHYVT----VLHA 37 (232)
T ss_dssp CCCCEEEEECC------------SCCCS--------------CHHHHHHHTTCEEE----ECSS
T ss_pred CCCcEEEEEee------------CHHHH--------------HHHHHHHHCCCEEE----EecC
Confidence 55689999863 22355 47778899999988 6654
No 113
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=29.53 E-value=52 Score=32.95 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=18.2
Q ss_pred cccCCeeeecccccCCHHHHHHHHHHHHHHhhcCCC
Q 005365 185 HCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVP 220 (700)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (700)
|+|+.-..+++++|.|.++++..+. .-.|..+|.
T Consensus 6 ~~~~~~~~~~~~~i~~~~~ie~~~~--~p~lg~iP~ 39 (271)
T 3bfv_A 6 HHHHHGSVIFDKRIKDEEDVEKELG--LPVLGSIQK 39 (271)
T ss_dssp ----------CCCCCSHHHHHHHHC--CCEEEEEEC
T ss_pred cccccccEEeeCcCCCHHHHHHHhC--CCeEEEecc
Confidence 4445557899999999998887653 455666665
No 114
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=29.12 E-value=33 Score=32.98 Aligned_cols=66 Identities=17% Similarity=0.219 Sum_probs=38.5
Q ss_pred HHHHccCcEEEe-CCCCCCccH--HHHHHHHcCCCEEEcCCCC-ccccc----ccC------CeEEEECCCCHHHHHHHH
Q 005365 607 RYICDTKGAFVQ-PALYEAFGL--TVVEAMTCGLPTFATCKGG-PAEII----VNG------KSGYHIDPYHGEQAAEIL 672 (700)
Q Consensus 607 ~~la~~aDvfV~-PS~~E~fGl--~vlEAMA~GlPVVAT~~GG-~~EiI----~dg------~~G~lv~p~D~eaLAeaI 672 (700)
+.+...+|+||. | -++|. .+.||+..|+||++-+..| ..+.+ .+| ....+.-.+|++++.+.|
T Consensus 113 ~~m~~~sda~Ivlp---GG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~~~l 189 (195)
T 1rcu_A 113 FVLLRNADVVVSIG---GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAVQII 189 (195)
T ss_dssp HHHHTTCSEEEEES---CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHHHHH
T ss_pred HHHHHhCCEEEEec---CCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHHHHH
Confidence 344445776655 5 34553 4688999999999986433 32222 222 111222235899988887
Q ss_pred HHH
Q 005365 673 VDF 675 (700)
Q Consensus 673 ~~l 675 (700)
.++
T Consensus 190 ~~~ 192 (195)
T 1rcu_A 190 EQI 192 (195)
T ss_dssp HTC
T ss_pred HHH
Confidence 654
No 115
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=28.90 E-value=34 Score=34.36 Aligned_cols=19 Identities=11% Similarity=0.172 Sum_probs=14.6
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++.|.+.||+|. ++.+.
T Consensus 26 ~la~~l~~~g~~V~----~~~r~ 44 (286)
T 3c24_A 26 RITRKIHDSAHHLA----AIEIA 44 (286)
T ss_dssp HHHHHHHHSSSEEE----EECCS
T ss_pred HHHHHHHhCCCEEE----EEECC
Confidence 56778899999988 77543
No 116
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=28.39 E-value=4.1e+02 Score=27.78 Aligned_cols=18 Identities=17% Similarity=0.324 Sum_probs=13.1
Q ss_pred HHHHHHHCCCceeeccEEEecc
Q 005365 317 MLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 317 La~~L~~~GheV~~~i~VvT~~ 338 (700)
+.++.++.|++|. +++..
T Consensus 20 i~~aa~~lG~~vv----~v~~~ 37 (425)
T 3vot_A 20 IFEEAERLGLKVT----FFYNS 37 (425)
T ss_dssp HHHHHHHTTCEEE----EEEET
T ss_pred HHHHHHHCCCEEE----EEECC
Confidence 3355688899998 77654
No 117
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=28.25 E-value=30 Score=32.88 Aligned_cols=20 Identities=20% Similarity=0.388 Sum_probs=16.1
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.+++.|.++|++|. ++++..
T Consensus 19 ~l~~~L~~~g~~V~----~~~r~~ 38 (227)
T 3dhn_A 19 ALLNEALNRGFEVT----AVVRHP 38 (227)
T ss_dssp HHHHHHHTTTCEEE----EECSCG
T ss_pred HHHHHHHHCCCEEE----EEEcCc
Confidence 56678899999998 888763
No 118
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=28.20 E-value=50 Score=32.22 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=23.6
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
|||++|..|- ..+|. ..+|.+..++.+.++||+|+
T Consensus 2 mkiLiI~gsp-----------r~~S~-------t~~l~~~~~~~l~~~g~ev~ 36 (228)
T 3tem_A 2 KKVLIVYAHQ-----------EPKSF-------NGSLKNVAVDELSRQGCTVT 36 (228)
T ss_dssp CEEEEEECCS-----------CTTSH-------HHHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEEEeCC-----------CCCCH-------HHHHHHHHHHHHHHCCCEEE
Confidence 7999997553 33443 33344466777888899999
No 119
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=28.14 E-value=34 Score=32.51 Aligned_cols=19 Identities=16% Similarity=0.239 Sum_probs=14.9
Q ss_pred HHHHHHH-HCCCceeeccEEEecc
Q 005365 316 EMLLRIK-QQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~-~~GheV~~~i~VvT~~ 338 (700)
.+++.|. ++|++|. ++++.
T Consensus 20 ~~~~~l~~~~g~~V~----~~~r~ 39 (221)
T 3r6d_A 20 XLTATLLTYTDMHIT----LYGRQ 39 (221)
T ss_dssp HHHHHHHHHCCCEEE----EEESS
T ss_pred HHHHHHHhcCCceEE----EEecC
Confidence 4566778 8999998 88765
No 120
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=28.02 E-value=53 Score=24.75 Aligned_cols=20 Identities=15% Similarity=0.205 Sum_probs=16.7
Q ss_pred cCCCCCCchHHHHHHhhcCC
Q 005365 217 TVVPETPFSELALRFQEIGL 236 (700)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~ 236 (700)
..++++-|..--..|++|||
T Consensus 2 ~~~~ee~~a~~L~~L~eMGF 21 (54)
T 2cp8_A 2 SSGSSGQTAALMAHLFEMGF 21 (54)
T ss_dssp CCSSCTTHHHHHHHHHHHTC
T ss_pred CCCHHHhhHHHHHHHHHcCC
Confidence 46788888877779999999
No 121
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=27.81 E-value=1.9e+02 Score=28.30 Aligned_cols=20 Identities=10% Similarity=-0.109 Sum_probs=14.8
Q ss_pred HHHHHHHHC-CCceeeccEEEeccC
Q 005365 316 EMLLRIKQQ-GLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~-GheV~~~i~VvT~~~ 339 (700)
.+++.|.++ |++|. ++++..
T Consensus 15 ~l~~~L~~~~g~~V~----~~~R~~ 35 (289)
T 3e48_A 15 HITNQAIANHIDHFH----IGVRNV 35 (289)
T ss_dssp HHHHHHHHTTCTTEE----EEESSG
T ss_pred HHHHHHhhCCCCcEE----EEECCH
Confidence 444567887 99999 888764
No 122
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=27.79 E-value=29 Score=32.94 Aligned_cols=20 Identities=15% Similarity=0.175 Sum_probs=16.2
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.+++.|.++|++|. ++++..
T Consensus 15 ~l~~~L~~~g~~V~----~~~R~~ 34 (219)
T 3dqp_A 15 SLLKSLSTTDYQIY----AGARKV 34 (219)
T ss_dssp HHHHHHTTSSCEEE----EEESSG
T ss_pred HHHHHHHHCCCEEE----EEECCc
Confidence 56678899999998 888764
No 123
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=27.74 E-value=75 Score=30.91 Aligned_cols=40 Identities=20% Similarity=0.289 Sum_probs=24.2
Q ss_pred ceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
||||++|..|-.+.. ..|+. .++|.+.+++.+.+.|++|+
T Consensus 25 M~kiLiI~gsp~~~~-------s~~s~-------n~~L~~~~~~~l~~~g~ev~ 64 (218)
T 3rpe_A 25 MSNVLIINAMKEFAH-------SKGAL-------NLTLTNVAADFLRESGHQVK 64 (218)
T ss_dssp CCCEEEEECCCCBTT-------BCSHH-------HHHHHHHHHHHHHHTTCCEE
T ss_pred CcceEEEEeCCCccc-------CCChH-------HHHHHHHHHHHHhhCCCEEE
Confidence 489999976532110 01222 23444466677888999998
No 124
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=27.69 E-value=97 Score=27.07 Aligned_cols=101 Identities=10% Similarity=0.160 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeC-CCCCCccHHHHHHHH-----cCCCEEEc-CC
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQP-ALYEAFGLTVVEAMT-----CGLPTFAT-CK 644 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~P-S~~E~fGl~vlEAMA-----~GlPVVAT-~~ 644 (700)
....+.+..++.|. .|.... +..+....+.. ..|++++- ...+.-|+.+++.+. ..+|+|.. ..
T Consensus 19 ~~~~l~~~L~~~g~--~v~~~~------~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 19 QAEHLKHILEETGY--QTEHVR------NGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHHHHHHHHHTTTC--EEEEES------SHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHHHHHHHHHCCC--EEEEeC------CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 34556666665543 243332 23555555543 24666664 334556778887775 46788773 33
Q ss_pred CC---cccccccCCeEEEECCCCHHHHHHHHHHHHHhccC
Q 005365 645 GG---PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKA 681 (700)
Q Consensus 645 GG---~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~ 681 (700)
.. ..+.+..|..+|+..|-+++++.++|..+++....
T Consensus 91 ~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~~~ 130 (154)
T 3gt7_A 91 SDPRDVVRSLECGADDFITKPCKDVVLASHVKRLLSGVKR 130 (154)
T ss_dssp CSHHHHHHHHHHCCSEEEESSCCHHHHHHHHHHHHHHTCC
T ss_pred CChHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 32 33445578899999999999999999999865433
No 125
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=27.64 E-value=2e+02 Score=27.76 Aligned_cols=20 Identities=10% Similarity=0.037 Sum_probs=15.6
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.++++|+++|++|. ++.+..
T Consensus 22 aia~~l~~~G~~V~----~~~r~~ 41 (257)
T 3tpc_A 22 AVTRMLAQEGATVL----GLDLKP 41 (257)
T ss_dssp HHHHHHHHTTCEEE----EEESSC
T ss_pred HHHHHHHHCCCEEE----EEeCCh
Confidence 56778899999987 776553
No 126
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=27.60 E-value=38 Score=34.15 Aligned_cols=20 Identities=20% Similarity=-0.024 Sum_probs=15.6
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.++++|.++||+|. +++|..
T Consensus 19 ~l~~~L~~~g~~V~----~~~R~~ 38 (321)
T 3c1o_A 19 FMVRASLSFSHPTF----IYARPL 38 (321)
T ss_dssp HHHHHHHHTTCCEE----EEECCC
T ss_pred HHHHHHHhCCCcEE----EEECCc
Confidence 45567788999999 888763
No 127
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=27.45 E-value=1.4e+02 Score=25.76 Aligned_cols=96 Identities=14% Similarity=0.180 Sum_probs=58.8
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeC-CCCCCccHHHHHHHH---cCCCEEEc-CCCC-
Q 005365 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQP-ALYEAFGLTVVEAMT---CGLPTFAT-CKGG- 646 (700)
Q Consensus 574 ~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~P-S~~E~fGl~vlEAMA---~GlPVVAT-~~GG- 646 (700)
...+....+..|. .|.... +..+....+.. ..|++++- ...+.-|..+++.+. ..+|+|.. ....
T Consensus 16 ~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~ 87 (155)
T 1qkk_A 16 RKAMQQTLELAGF--TVSSFA------SATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDI 87 (155)
T ss_dssp HHHHHHHHHHTTC--EEEEES------CHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGH
T ss_pred HHHHHHHHHHcCc--EEEEEC------CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCCh
Confidence 4555666665553 244332 23444444432 24666653 233445666666653 47888773 3322
Q ss_pred --cccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 005365 647 --PAEIIVNGKSGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 647 --~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
..+.+..|..+++..|.+++.+...|..++.
T Consensus 88 ~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 88 PMAVQAIQDGAYDFIAKPFAADRLVQSARRAEE 120 (155)
T ss_dssp HHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHH
Confidence 3445567889999999999999999999873
No 128
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=27.41 E-value=95 Score=29.10 Aligned_cols=53 Identities=17% Similarity=0.247 Sum_probs=33.8
Q ss_pred eEEEEEccccccccCCcCCC-C-CcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEecc
Q 005365 277 FNVVILTPHGYFAQDDVLGY-P-DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~-p-~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
|||+|=..||-.. +|. + ..|| ++=.+...++++.|.+.|.+.|++|. +++||.
T Consensus 2 m~IviDpGHGG~D----~G~~~ga~g~--~~Ekdi~l~ia~~l~~~L~~~G~~V~---v~ltR~ 56 (180)
T 3qay_A 2 MKICITVGHSILK----SGACTSADGV--VNEYQYNKSLAPVLADTFRKEGHKVD---VIICPE 56 (180)
T ss_dssp CEEEEEECCCBCT----TSCBCSCBSS--SBHHHHHHHHHHHHHHHHHHTTCEEE---EECCCS
T ss_pred eEEEEECCCCCCC----CCCcCCCCCC--ccHHHHHHHHHHHHHHHHHhcCCcce---EEECCC
Confidence 7899888898422 121 1 1243 33345556666688999999999984 156654
No 129
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=27.28 E-value=1.7e+02 Score=24.61 Aligned_cols=97 Identities=12% Similarity=0.132 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeC-CCCCCccHHHHHHHHc-----CCCEEE-cCC
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQP-ALYEAFGLTVVEAMTC-----GLPTFA-TCK 644 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~P-S~~E~fGl~vlEAMA~-----GlPVVA-T~~ 644 (700)
..+.+....+..|. .|.... +..+....+.. ..|++++- ...+.-|+.+++.+.. .+|||. |..
T Consensus 19 ~~~~l~~~L~~~g~--~v~~~~------~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 90 (142)
T 3cg4_A 19 VRIAVKTILSDAGF--HIISAD------SGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAK 90 (142)
T ss_dssp HHHHHHHHHHHTTC--EEEEES------SHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECT
T ss_pred HHHHHHHHHHHCCe--EEEEeC------CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECC
Confidence 34566666666653 344332 23556666543 24666653 2334567778887754 567776 332
Q ss_pred ---CCcccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 005365 645 ---GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 645 ---GG~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
....+.+..|..+++..|-+.+++.++|..+++
T Consensus 91 ~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 91 NAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFMG 126 (142)
T ss_dssp TCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHHHH
Confidence 334455667888999999999999999998874
No 130
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=27.28 E-value=48 Score=31.34 Aligned_cols=32 Identities=28% Similarity=0.388 Sum_probs=23.7
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHH--CCCcee
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQ--QGLDIT 329 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~--~GheV~ 329 (700)
|.|||+|-|.|.-+. |-+.+.+.|.+ +||+|.
T Consensus 21 M~MkIaIgsDhaG~~-----------------------lK~~i~~~L~~~~~G~eV~ 54 (179)
T 3k7p_A 21 MTRRVAIGTDHPAFA-----------------------IHENLILYVKEAGDEFVPV 54 (179)
T ss_dssp CCEEEEEEECTGGGG-----------------------GHHHHHHHHHHTCTTEEEE
T ss_pred CceEEEEEECchHHH-----------------------HHHHHHHHHHhcCCCCeEE
Confidence 679999999986321 12256778899 999987
No 131
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=27.21 E-value=42 Score=33.81 Aligned_cols=20 Identities=20% Similarity=0.117 Sum_probs=15.8
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.++++|.++||+|. +++|..
T Consensus 26 ~l~~~L~~~g~~V~----~l~R~~ 45 (318)
T 2r6j_A 26 HMVKGSLKLGHPTY----VFTRPN 45 (318)
T ss_dssp HHHHHHHHTTCCEE----EEECTT
T ss_pred HHHHHHHHCCCcEE----EEECCC
Confidence 45567889999998 888764
No 132
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=26.88 E-value=56 Score=30.00 Aligned_cols=30 Identities=17% Similarity=0.409 Sum_probs=22.5
Q ss_pred eEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 277 mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
|||+|-|.|. |.+ |-+.+.+.|.++||+|.
T Consensus 2 MkIaigsDha--------------G~~---------lK~~i~~~L~~~G~eV~ 31 (149)
T 2vvr_A 2 KKIAFGCDHV--------------GFI---------LKHEIVAHLVERGVEVI 31 (149)
T ss_dssp CEEEEEECTT--------------GGG---------GHHHHHHHHHHTTCEEE
T ss_pred cEEEEEeCch--------------hHH---------HHHHHHHHHHHCCCEEE
Confidence 8999999886 321 22357778999999987
No 133
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=26.70 E-value=42 Score=27.95 Aligned_cols=19 Identities=11% Similarity=0.134 Sum_probs=14.3
Q ss_pred HHHHHHHHCC-CceeeccEEEecc
Q 005365 316 EMLLRIKQQG-LDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~G-heV~~~i~VvT~~ 338 (700)
.+++.|.++| ++|. ++.+.
T Consensus 19 ~~~~~l~~~g~~~v~----~~~r~ 38 (118)
T 3ic5_A 19 MIAALLKTSSNYSVT----VADHD 38 (118)
T ss_dssp HHHHHHHHCSSEEEE----EEESC
T ss_pred HHHHHHHhCCCceEE----EEeCC
Confidence 4566788999 8887 77654
No 134
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=26.69 E-value=34 Score=35.24 Aligned_cols=19 Identities=11% Similarity=0.249 Sum_probs=15.5
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
-|+..|++.||+|+ ++.+.
T Consensus 28 ala~~L~~~G~~V~----~~~r~ 46 (335)
T 1z82_A 28 VFAQMLHENGEEVI----LWARR 46 (335)
T ss_dssp HHHHHHHHTTCEEE----EECSS
T ss_pred HHHHHHHhCCCeEE----EEeCC
Confidence 46778899999999 88764
No 135
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=26.37 E-value=35 Score=34.99 Aligned_cols=20 Identities=10% Similarity=-0.164 Sum_probs=15.9
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.+++.|.++||+|. +++|..
T Consensus 25 ~l~~~L~~~g~~V~----~l~R~~ 44 (346)
T 3i6i_A 25 FVATASLDAHRPTY----ILARPG 44 (346)
T ss_dssp HHHHHHHHTTCCEE----EEECSS
T ss_pred HHHHHHHHCCCCEE----EEECCC
Confidence 45667889999999 888764
No 136
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=26.26 E-value=3e+02 Score=23.42 Aligned_cols=75 Identities=12% Similarity=0.068 Sum_probs=49.1
Q ss_pred hHHHHHHHc-cCcEEEeCC-CCCCccHHHHHHHHc---CCCEEEc-CCC---CcccccccCCeEEEECCCCHHHHHHHHH
Q 005365 603 GELYRYICD-TKGAFVQPA-LYEAFGLTVVEAMTC---GLPTFAT-CKG---GPAEIIVNGKSGYHIDPYHGEQAAEILV 673 (700)
Q Consensus 603 ~el~~~la~-~aDvfV~PS-~~E~fGl~vlEAMA~---GlPVVAT-~~G---G~~EiI~dg~~G~lv~p~D~eaLAeaI~ 673 (700)
.+..+.+.. ..|++++=. ..+.-|+.+++.+.. .+|+|.. ... ...+.+..|..+|+..|.+++++.++|.
T Consensus 56 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~ 135 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLH 135 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHH
T ss_pred HHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHH
Confidence 455555432 245665542 345556677666543 6777763 322 2345566788999999999999999999
Q ss_pred HHHH
Q 005365 674 DFFE 677 (700)
Q Consensus 674 ~ll~ 677 (700)
.+++
T Consensus 136 ~~~~ 139 (150)
T 4e7p_A 136 TVLE 139 (150)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9873
No 137
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=26.10 E-value=3.2e+02 Score=23.60 Aligned_cols=75 Identities=9% Similarity=0.154 Sum_probs=48.7
Q ss_pred hhHHHHHHHc---cCcEEEeCC-CCCCccHHHHHHHH---cCCCEEEc-CCC---CcccccccCCeEEEECCCCHHHHHH
Q 005365 602 NGELYRYICD---TKGAFVQPA-LYEAFGLTVVEAMT---CGLPTFAT-CKG---GPAEIIVNGKSGYHIDPYHGEQAAE 670 (700)
Q Consensus 602 ~~el~~~la~---~aDvfV~PS-~~E~fGl~vlEAMA---~GlPVVAT-~~G---G~~EiI~dg~~G~lv~p~D~eaLAe 670 (700)
..+....+.. ..|++++-. ..+.-|+.+++.+. ..+|||.. ... ...+.+..|..+++..|-+.+++.+
T Consensus 70 ~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~ 149 (157)
T 3hzh_A 70 GEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQ 149 (157)
T ss_dssp HHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHH
Confidence 3455555543 136666643 33455666666653 46788774 322 2334556788999999999999999
Q ss_pred HHHHHH
Q 005365 671 ILVDFF 676 (700)
Q Consensus 671 aI~~ll 676 (700)
+|..++
T Consensus 150 ~i~~~l 155 (157)
T 3hzh_A 150 RVMSVF 155 (157)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 998765
No 138
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=25.81 E-value=1.6e+02 Score=31.13 Aligned_cols=18 Identities=17% Similarity=0.554 Sum_probs=14.0
Q ss_pred HHHHHHHHCCCceeeccEEEec
Q 005365 316 EMLLRIKQQGLDITPQILIITR 337 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~ 337 (700)
+++++++++|++|. ++..
T Consensus 33 ~~~~a~~~~G~~v~----~v~~ 50 (433)
T 2dwc_A 33 EIAIEAQRLGVEVV----AVDR 50 (433)
T ss_dssp HHHHHHHHTTCEEE----EEES
T ss_pred HHHHHHHHCCCEEE----EEEC
Confidence 56777899999987 6653
No 139
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=25.80 E-value=2.3e+02 Score=26.35 Aligned_cols=115 Identities=14% Similarity=0.127 Sum_probs=67.1
Q ss_pred hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH----ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEc--
Q 005365 569 EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC----DTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-- 642 (700)
Q Consensus 569 ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la----~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-- 642 (700)
.+.+..++.....+++|++-.++..+.. -..+++.+|.. +.+++++.-+--++- +.-+=|-..-+|||+-
T Consensus 17 SD~~v~~~a~~~l~~~gi~~ev~V~SaH---R~p~~~~~~~~~a~~~g~~ViIa~AG~aa~-LpgvvA~~t~~PVIgVP~ 92 (169)
T 3trh_A 17 SDLSTMETAFTELKSLGIPFEAHILSAH---RTPKETVEFVENADNRGCAVFIAAAGLAAH-LAGTIAAHTLKPVIGVPM 92 (169)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEECCTT---TSHHHHHHHHHHHHHTTEEEEEEEECSSCC-HHHHHHHTCSSCEEEEEC
T ss_pred HhHHHHHHHHHHHHHcCCCEEEEEEccc---CCHHHHHHHHHHHHhCCCcEEEEECChhhh-hHHHHHhcCCCCEEEeec
Confidence 3446677888888999998778888843 23567777764 225777776544432 3323344567888873
Q ss_pred ---CCCCccccc---c--cCCeEEEECCC-----CHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 005365 643 ---CKGGPAEII---V--NGKSGYHIDPY-----HGEQAAEILVDFFEKCKADPSYWDKISLG 692 (700)
Q Consensus 643 ---~~GG~~EiI---~--dg~~G~lv~p~-----D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ 692 (700)
..+|...++ + .|.-=-.+.-+ +..-+|..|..+ .|+++|+++...
T Consensus 93 ~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~-----~d~~l~~kl~~~ 150 (169)
T 3trh_A 93 AGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIAL-----QDKSIAQKLVQQ 150 (169)
T ss_dssp CCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcC-----CCHHHHHHHHHH
Confidence 334443332 2 22100122222 445555566554 799998887654
No 140
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=25.53 E-value=2.3e+02 Score=26.23 Aligned_cols=115 Identities=14% Similarity=0.171 Sum_probs=67.9
Q ss_pred hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc----cCcEEEeCCCCCCccHHHHHHHHcCCCEEEc--
Q 005365 569 EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD----TKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-- 642 (700)
Q Consensus 569 ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~----~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT-- 642 (700)
.+.+..++.....+++|++-.++..+.. -..+++.+|... .+++++.-+--++- +.-+=|-..-+|||+-
T Consensus 14 SD~~v~~~a~~~l~~~gi~~ev~V~SaH---R~p~~~~~~~~~a~~~g~~ViIa~AG~aa~-LpgvvA~~t~~PVIgVP~ 89 (163)
T 3ors_A 14 SDWKIMQESCNMLDYFEIPYEKQVVSAH---RTPKMMVQFASEARERGINIIIAGAGGAAH-LPGMVASLTTLPVIGVPI 89 (163)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEECCTT---TSHHHHHHHHHHTTTTTCCEEEEEEESSCC-HHHHHHHHCSSCEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEECCc---CCHHHHHHHHHHHHhCCCcEEEEECCchhh-hHHHHHhccCCCEEEeeC
Confidence 3446677888888999998778888843 235777777642 26788776544432 3323344577888873
Q ss_pred ---CCCCcccc---cc--cCC--eEEEEC---CCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 005365 643 ---CKGGPAEI---IV--NGK--SGYHID---PYHGEQAAEILVDFFEKCKADPSYWDKISLG 692 (700)
Q Consensus 643 ---~~GG~~Ei---I~--dg~--~G~lv~---p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ 692 (700)
..+|...+ ++ .|. .=+-++ +.+..-+|..|..+ .|+++|+++.+.
T Consensus 90 ~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~-----~d~~l~~kl~~~ 147 (163)
T 3ors_A 90 ETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSI-----QNPSLVEKLNQY 147 (163)
T ss_dssp CCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHHT-----TCTHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHhC-----CCHHHHHHHHHH
Confidence 23344422 22 121 111232 33555556666655 799988887654
No 141
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=25.24 E-value=1.7e+02 Score=29.49 Aligned_cols=17 Identities=6% Similarity=-0.029 Sum_probs=10.6
Q ss_pred HHHHHHHHHcCCCCeEEEEc
Q 005365 393 DVAVEIAKELQGKPDLIIGN 412 (700)
Q Consensus 393 ~~~~~l~~~~~~~pDlIh~h 412 (700)
.+.....+. ++|+|+..
T Consensus 63 ~l~~~~~~~---~~d~vi~~ 79 (331)
T 2pn1_A 63 HLLTLCQDE---GVTALLTL 79 (331)
T ss_dssp HHHHHHHHH---TCCEEEES
T ss_pred HHHHHHHHc---CCCEEEeC
Confidence 344444444 79999874
No 142
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=24.93 E-value=36 Score=34.69 Aligned_cols=17 Identities=24% Similarity=0.256 Sum_probs=13.3
Q ss_pred HHHHHHHCCCceeeccEEEecc
Q 005365 317 MLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 317 La~~L~~~GheV~~~i~VvT~~ 338 (700)
++..|+ .|++|+ ++++.
T Consensus 17 ~a~~L~-~g~~V~----~~~r~ 33 (307)
T 3ego_A 17 CAYYLS-LYHDVT----VVTRR 33 (307)
T ss_dssp HHHHHH-TTSEEE----EECSC
T ss_pred HHHHHh-cCCceE----EEECC
Confidence 455678 999999 88765
No 143
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=24.85 E-value=59 Score=32.91 Aligned_cols=19 Identities=16% Similarity=0.300 Sum_probs=15.0
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.++++++++|++|. +++..
T Consensus 15 ~l~~a~~~~G~~v~----~~~~~ 33 (334)
T 2r85_A 15 QILKGAKDEGFETI----AFGSS 33 (334)
T ss_dssp HHHHHHHHTTCCEE----EESCG
T ss_pred HHHHHHHhCCCEEE----EEECC
Confidence 56778899999998 77644
No 144
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=24.84 E-value=3e+02 Score=22.92 Aligned_cols=99 Identities=8% Similarity=0.064 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCC-CCCCccHHHHHHHHc-----CCCEEEc-CC
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPA-LYEAFGLTVVEAMTC-----GLPTFAT-CK 644 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS-~~E~fGl~vlEAMA~-----GlPVVAT-~~ 644 (700)
....+....++.|. .|.... +..+..+.+.. ..|++++-. ..+.-|+.+++.+.. .+|+|.. ..
T Consensus 18 ~~~~l~~~l~~~g~--~v~~~~------~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 18 IARLLNLMLEKGGF--DSDMVH------SAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp HHHHHHHHHHHTTC--EEEEEC------SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred HHHHHHHHHHHCCC--eEEEEC------CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecC
Confidence 34566666766554 244432 23455555543 357777643 345667888888765 7788874 33
Q ss_pred CC---cc-cccccCCeEEEECCCCHHHHHHHHHHHHHhc
Q 005365 645 GG---PA-EIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 679 (700)
Q Consensus 645 GG---~~-EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~ 679 (700)
.. .. +.+..|..+++..|.+.+++.++|..++++.
T Consensus 90 ~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 90 AREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp HHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHHhc
Confidence 22 22 5566788999999999999999999998543
No 145
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=24.83 E-value=44 Score=33.99 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=15.1
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++.|.++||+|. ++++.
T Consensus 17 ~l~~~L~~~g~~V~----~~~r~ 35 (348)
T 1ek6_A 17 HTVLELLEAGYLPV----VIDNF 35 (348)
T ss_dssp HHHHHHHHTTCCEE----EEECS
T ss_pred HHHHHHHHCCCEEE----EEecC
Confidence 56677889999998 87764
No 146
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=24.74 E-value=1.1e+02 Score=26.53 Aligned_cols=76 Identities=11% Similarity=0.034 Sum_probs=50.1
Q ss_pred hhHHHHHHHcc--CcEEEeC-CCCCCccHHHHHHHH---cCCCEEE-cCCCC---cccccccC-CeEEEECCCCHHHHHH
Q 005365 602 NGELYRYICDT--KGAFVQP-ALYEAFGLTVVEAMT---CGLPTFA-TCKGG---PAEIIVNG-KSGYHIDPYHGEQAAE 670 (700)
Q Consensus 602 ~~el~~~la~~--aDvfV~P-S~~E~fGl~vlEAMA---~GlPVVA-T~~GG---~~EiI~dg-~~G~lv~p~D~eaLAe 670 (700)
..+....+... .|++++- ...+.-|+.+++.+. ..+|+|. |.... ..+.+..| ..+++..|-+.+++.+
T Consensus 36 ~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~ 115 (151)
T 3kcn_A 36 GPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQMSDIKA 115 (151)
T ss_dssp HHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCHHHHHH
Confidence 45666666543 2766663 334556777766654 4677776 33322 34445567 7899999999999999
Q ss_pred HHHHHHH
Q 005365 671 ILVDFFE 677 (700)
Q Consensus 671 aI~~ll~ 677 (700)
+|..+++
T Consensus 116 ~i~~~l~ 122 (151)
T 3kcn_A 116 AINAGIK 122 (151)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999883
No 147
>2f5x_A BUGD; periplasmic binding protein, transport protein; 1.72A {Bordetella pertussis tohama I}
Probab=24.72 E-value=4.6e+02 Score=26.50 Aligned_cols=102 Identities=13% Similarity=0.134 Sum_probs=61.8
Q ss_pred HHHHcCCCC-cEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC-EEEc----------CCCC-
Q 005365 580 LIDQYKLNG-QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP-TFAT----------CKGG- 646 (700)
Q Consensus 580 li~~l~L~~-~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP-VVAT----------~~GG- 646 (700)
+.+..|+.- +|-|-| ..+.+..++....|+.+... -++.+....|.- +++. ++..
T Consensus 158 l~~~~Gi~~~~Vpy~G------~~~a~~aL~~G~VD~~~~~~------~~~~~~i~~g~lr~Lav~~~~r~~~~pdvPt~ 225 (312)
T 2f5x_A 158 LVEALGVNLLTIPYKG------TAPAMNDLLGKQVDLMCDQT------TNTTQQITSGKVKAYAVTSLKRVPTLPDLPTM 225 (312)
T ss_dssp HHHHHTCCCEEEECSS------HHHHHHHHHTTSSCEEEEEH------HHHHHHHHTTSSEEEEECSSSCCTTSTTSCBT
T ss_pred HHHHHCCCeEEeccCC------hHHHHHHHHcCCccEEEech------HHHHHHHHcCCeEEEEEcCccchhhcCCCCCH
Confidence 444566642 344433 13556666766678777642 245666667743 3332 1111
Q ss_pred ----cccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 647 ----PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 647 ----~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
.+.+....-.|+.++.+.++++.++|.+.+.+...||+..+.+.+.+
T Consensus 226 ~E~G~~~~~~~~w~gl~ap~g~p~~vv~~l~~al~~~~~~p~~~~~~~~~g 276 (312)
T 2f5x_A 226 DESGYKGFEVGIWHGMWAPKGTPKPVVDKLVKSLQAGLADPKFQERMKQLG 276 (312)
T ss_dssp TTTTCTTCCCEEEEEEEEETTCCHHHHHHHHHHHHHHHTCHHHHHHHHHTT
T ss_pred hhcCCCCeeEEEEEEEEEcCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHCC
Confidence 11111122368889988888899988888888889999988876654
No 148
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=24.61 E-value=3e+02 Score=22.74 Aligned_cols=97 Identities=14% Similarity=0.242 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc--cCcEEEeC-CCCCCccHHHHHHHHc-----CCCEEE-cC
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD--TKGAFVQP-ALYEAFGLTVVEAMTC-----GLPTFA-TC 643 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~--~aDvfV~P-S~~E~fGl~vlEAMA~-----GlPVVA-T~ 643 (700)
..+.+....++.|... +.... +..+....+.. ..|++++= ...+.-|+.+++.+.. .+|+|. |.
T Consensus 17 ~~~~l~~~L~~~g~~~-v~~~~------~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~ 89 (129)
T 3h1g_A 17 MRRIIKNTLSRLGYED-VLEAE------HGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITA 89 (129)
T ss_dssp HHHHHHHHHHHTTCCC-EEEES------SHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEES
T ss_pred HHHHHHHHHHHcCCcE-EEEeC------CHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeC
Confidence 4456677777766532 43332 23445554432 25777663 2345568888888753 578877 44
Q ss_pred CCCc---ccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 644 KGGP---AEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 644 ~GG~---~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
.... .+.+..|..+|+..|-+++++.++|..++
T Consensus 90 ~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l 125 (129)
T 3h1g_A 90 EGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVL 125 (129)
T ss_dssp CCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHh
Confidence 3333 34456788999999999999999999887
No 149
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=24.45 E-value=3.1e+02 Score=22.89 Aligned_cols=97 Identities=5% Similarity=-0.033 Sum_probs=60.3
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH------ccCcEEEeCC-CCCCccHHHHHHHHc-------CCCE
Q 005365 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC------DTKGAFVQPA-LYEAFGLTVVEAMTC-------GLPT 639 (700)
Q Consensus 574 ~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la------~~aDvfV~PS-~~E~fGl~vlEAMA~-------GlPV 639 (700)
...+....+..+....|.... +..+....+. ...|++++-. ..+.-|+.+++.+.. .+|+
T Consensus 22 ~~~l~~~l~~~~~~~~v~~~~------~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~i 95 (146)
T 3ilh_A 22 NFLNTTIIRMTHRVEEIQSVT------SGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIV 95 (146)
T ss_dssp HHHHHHHHHTTCCEEEEEEES------SHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEE
T ss_pred HHHHHHHHHhcCCCeeeeecC------CHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeE
Confidence 445566666554322343332 2355566654 2367777643 345667788777654 6777
Q ss_pred EEc-CCCC---cccccccC-CeEEEECCCCHHHHHHHHHHHH
Q 005365 640 FAT-CKGG---PAEIIVNG-KSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 640 VAT-~~GG---~~EiI~dg-~~G~lv~p~D~eaLAeaI~~ll 676 (700)
|.. .... ..+....| ..+|+..|-+++++.++|...+
T Consensus 96 i~~t~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~~ 137 (146)
T 3ilh_A 96 CLLSSSLDPRDQAKAEASDWVDYYVSKPLTANALNNLYNKVL 137 (146)
T ss_dssp EEECSSCCHHHHHHHHHCSSCCEEECSSCCHHHHHHHHHHHH
T ss_pred EEEeCCCChHHHHHHHhcCCcceeeeCCCCHHHHHHHHHHHH
Confidence 663 3332 23344566 8899999999999999999887
No 150
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=24.43 E-value=62 Score=32.27 Aligned_cols=19 Identities=16% Similarity=0.326 Sum_probs=15.1
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++++.++||+|. ++...
T Consensus 25 ~l~~al~~~G~~v~----~~~~~ 43 (306)
T 1iow_A 25 AVLAGLREGGIDAY----PVDPK 43 (306)
T ss_dssp HHHHHHHHTTCEEE----EECTT
T ss_pred HHHHHHHHCCCeEE----EEecC
Confidence 67888999999998 76543
No 151
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=24.42 E-value=95 Score=28.46 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=12.9
Q ss_pred HHHHHHHHCCCcee
Q 005365 316 EMLLRIKQQGLDIT 329 (700)
Q Consensus 316 eLa~~L~~~GheV~ 329 (700)
.++..|+++||+|+
T Consensus 27 Yl~~~Lk~~G~~v~ 40 (157)
T 1kjn_A 27 YTSHKLKKKGFRVT 40 (157)
T ss_dssp HHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCeeE
Confidence 78889999999998
No 152
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=24.30 E-value=2.9e+02 Score=24.31 Aligned_cols=19 Identities=11% Similarity=0.247 Sum_probs=13.7
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++.|.+.|++|. .+.+.
T Consensus 32 ~~~~~L~~~G~~V~----~vnp~ 50 (138)
T 1y81_A 32 IILKDLLSKGFEVL----PVNPN 50 (138)
T ss_dssp HHHHHHHHTTCEEE----EECTT
T ss_pred HHHHHHHHCCCEEE----EeCCC
Confidence 56667889999877 66543
No 153
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=24.28 E-value=33 Score=33.09 Aligned_cols=20 Identities=10% Similarity=0.272 Sum_probs=15.6
Q ss_pred HHHHHHHHCC-CceeeccEEEeccC
Q 005365 316 EMLLRIKQQG-LDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~G-heV~~~i~VvT~~~ 339 (700)
.+++.|.++| ++|. ++++..
T Consensus 38 ~l~~~L~~~G~~~V~----~~~R~~ 58 (236)
T 3qvo_A 38 HVINQLADKQTIKQT----LFARQP 58 (236)
T ss_dssp HHHHHHTTCTTEEEE----EEESSG
T ss_pred HHHHHHHhCCCceEE----EEEcCh
Confidence 5667889999 8888 887753
No 154
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=24.24 E-value=89 Score=29.28 Aligned_cols=26 Identities=23% Similarity=0.243 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHC-CCceeeccEEEecc
Q 005365 308 DQVRALEDEMLLRIKQQ-GLDITPQILIITRL 338 (700)
Q Consensus 308 d~araL~~eLa~~L~~~-GheV~~~i~VvT~~ 338 (700)
+...++++.|.+.|.+. |++| ++||.
T Consensus 28 ~~~l~ia~~l~~~L~~~~G~~V-----~ltR~ 54 (179)
T 1jwq_A 28 TFNLAMALKVESILKQNPKLEV-----VLTRS 54 (179)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEE-----EESCS
T ss_pred HHHHHHHHHHHHHHHhCCCCEE-----EEeCC
Confidence 44555566888899999 9988 46765
No 155
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=24.17 E-value=58 Score=30.65 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=19.9
Q ss_pred cceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 005365 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (700)
Q Consensus 275 m~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 329 (700)
|||||++|+.+ |..+|.... |.+.+++.+. .|++|+
T Consensus 1 MM~kilii~gS-----------~r~~s~t~~-------la~~~~~~~~-~~~~v~ 36 (192)
T 3fvw_A 1 MSKRILFIVGS-----------FSEGSFNRQ-------LAKKAETIIG-DRAQVS 36 (192)
T ss_dssp --CEEEEEESC-----------CSTTCHHHH-------HHHHHHHHHT-TSSEEE
T ss_pred CCCEEEEEEcC-----------CCCCCHHHH-------HHHHHHHhcC-CCCEEE
Confidence 67899999743 333453332 2234455554 788888
No 156
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=23.71 E-value=77 Score=30.11 Aligned_cols=36 Identities=11% Similarity=0.190 Sum_probs=23.6
Q ss_pred ceEEEEEccccccccCCcCCCCCc-CcchhhhHHHHHHHHHHHHHHHHHC--CCcee
Q 005365 276 VFNVVILTPHGYFAQDDVLGYPDT-GGQVVYILDQVRALEDEMLLRIKQQ--GLDIT 329 (700)
Q Consensus 276 ~mkI~iis~h~~~~~~~~lG~p~~-GG~~vyvld~araL~~eLa~~L~~~--GheV~ 329 (700)
||||++|..|- .. +|. .++|.+.+++.+.++ |++|+
T Consensus 1 MmkiLii~gSp-----------r~~~s~-------t~~l~~~~~~~~~~~~~g~~v~ 39 (212)
T 3r6w_A 1 MSRILAVHASP-----------RGERSQ-------SRRLAEVFLAAYREAHPQARVA 39 (212)
T ss_dssp CCCEEEEECCS-----------CSTTCH-------HHHHHHHHHHHHHHHCTTCCEE
T ss_pred CCEEEEEEeCC-----------CCCCCH-------HHHHHHHHHHHHHHhCCCCeEE
Confidence 48999997443 22 342 233445677788887 99998
No 157
>3ikm_A DNA polymerase subunit gamma-1; human mitochondrial DNA polymerase, disease mutation, DNA replication, DNA-binding, DNA-directed DNA polymerase; HET: DNA; 3.24A {Homo sapiens}
Probab=23.50 E-value=56 Score=39.27 Aligned_cols=79 Identities=22% Similarity=0.367 Sum_probs=53.8
Q ss_pred hhhhhhHhhhhhhcCCCC------CcchHHHHHhhcccCCeeeecccccC---------CH---------HHHHHHHHHH
Q 005365 156 GVEFLNRHLSAKLFHDKE------SMHPLLEFLRVHCHKGKNMMLNDRIQ---------NL---------NSLQHVLRKA 211 (700)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---------~~~~~~~~~~ 211 (700)
|||.|.++|-+|+|.+.. .++.-.+.|+.|.+.|+.--+..-|. |+ .+...-+..|
T Consensus 6 giQmLS~~Lh~QiF~~~~~~~~~~~v~~s~~hL~~H~L~gk~t~~~p~v~~~LP~L~G~nldEHF~~lg~~~s~PYl~~a 85 (1172)
T 3ikm_A 6 DIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAA 85 (1172)
T ss_dssp SSSCCCSSHHHHSCSSCCCCCTHHHHHHHHHTTTTTTCCSSSCCCCCCCCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHhhCCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCCCCCCCCcCCCcCCCCHHHHHHHHHHHHhHHHHHHH
Confidence 899999999999996542 13445578999999988754443332 11 2334456777
Q ss_pred HHHhhcCCCCCCchHHHHHHhhcCCccccCc
Q 005365 212 EEYLTTVVPETPFSELALRFQEIGLERGWGD 242 (700)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 242 (700)
.+++..-.|..| ++|=|.+||-.
T Consensus 86 ~~~~~~~lP~~P--------~~W~~~~GWTr 108 (1172)
T 3ikm_A 86 NLLLQAQLPPKP--------PAWAWAEGWTR 108 (1172)
T ss_dssp HHHHHCCCCCCC--------CSCCCSSCCCC
T ss_pred HHHHhcCCCCCC--------cCccccCCeee
Confidence 777765455556 68999999943
No 158
>2qpq_A Protein BUG27; alpha/beta domain, venus flytrap, transport protein; HET: CIT; 1.92A {Bordetella pertussis}
Probab=23.40 E-value=4e+02 Score=26.74 Aligned_cols=85 Identities=16% Similarity=0.048 Sum_probs=53.1
Q ss_pred hHHHHHHHccCcEEEeCCCCCCccHHHHHHHHcCCC-EEE-c---------CCCC-----cccccccCCeEEEECCCCHH
Q 005365 603 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP-TFA-T---------CKGG-----PAEIIVNGKSGYHIDPYHGE 666 (700)
Q Consensus 603 ~el~~~la~~aDvfV~PS~~E~fGl~vlEAMA~GlP-VVA-T---------~~GG-----~~EiI~dg~~G~lv~p~D~e 666 (700)
+.+..++....|+.+.. .-++.+....|.- +++ + ++.- ...+....-.|+.++.+.++
T Consensus 167 ~a~~al~~G~vD~~~~~------~~~~~~~i~~g~lr~Lav~~~~r~~~~pdvPt~~e~G~~~~~~~~w~gl~ap~g~p~ 240 (301)
T 2qpq_A 167 PALNDVLGSQIGLAVVT------ASSAIPFIKAGKLQALAVTSKERSALLPEVPTVAEQGVAGYELNQWHGLLVPGATPM 240 (301)
T ss_dssp HHHHHHHTTSSSCEEEE------HHHHHHHHHTTSEEEEEECSSSCCTTCTTSCBSGGGTCTTCCCEEEEEEEEETTCCH
T ss_pred HHHHHHHCCCccEEEEc------HHHHHHHHhcCCeEEEEEcCCccccccCCCCChHHhCCCceEEEeEEEEEecCCCCH
Confidence 45566666667776654 2245566666642 232 1 1111 11111122368889988888
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHH
Q 005365 667 QAAEILVDFFEKCKADPSYWDKISLGG 693 (700)
Q Consensus 667 aLAeaI~~ll~~~~~dp~~~~~ms~~a 693 (700)
++.++|.+.+.+...||+..+.+.+.+
T Consensus 241 ~vv~~l~~al~~~~~~~~~~~~~~~~g 267 (301)
T 2qpq_A 241 AVRQKLYDGIAKVMQRDDVQKKLADLG 267 (301)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHCC
Confidence 888888888888889999988887665
No 159
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=23.39 E-value=2.1e+02 Score=27.57 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEcCCCchHHHHHHHHhcCCcEEEEecCC
Q 005365 390 YTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (700)
Q Consensus 390 f~~~~~~~l~~~~~~~pDlIh~h~~~~~lva~lla~~~giP~V~t~H~l 438 (700)
|...+...+.+. +||+|..-.+..-+....+. .....++ .+|..
T Consensus 68 ~~~~~~~~l~~~---~~Dliv~a~y~~il~~~~l~-~~~~~~i-NiHpS 111 (216)
T 2ywr_A 68 FEERMALELKKK---GVELVVLAGFMRILSHNFLK-YFPNKVI-NIHPS 111 (216)
T ss_dssp HHHHHHHHHHHT---TCCEEEESSCCSCCCHHHHT-TSTTCEE-EEESS
T ss_pred hhHHHHHHHHhc---CCCEEEEeCchhhCCHHHHh-hccCCeE-EEcCC
Confidence 334455555554 89999985543332223232 2223444 46644
No 160
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=23.30 E-value=43 Score=33.57 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=14.9
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.++..|++.||+|+ ++.+.
T Consensus 17 ~~a~~l~~~g~~V~----~~~r~ 35 (316)
T 2ew2_A 17 RLGIMLHQGGNDVT----LIDQW 35 (316)
T ss_dssp HHHHHHHHTTCEEE----EECSC
T ss_pred HHHHHHHhCCCcEE----EEECC
Confidence 46677899999998 87653
No 161
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=23.26 E-value=62 Score=33.31 Aligned_cols=20 Identities=10% Similarity=0.064 Sum_probs=15.2
Q ss_pred HHHHHHHHC-CCceeeccEEEeccC
Q 005365 316 EMLLRIKQQ-GLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~-GheV~~~i~VvT~~~ 339 (700)
.|+++|.++ ||+|. ++++..
T Consensus 39 ~l~~~L~~~~g~~V~----~~~r~~ 59 (372)
T 3slg_A 39 HLSKRILETTDWEVF----GMDMQT 59 (372)
T ss_dssp HHHHHHHHHSSCEEE----EEESCC
T ss_pred HHHHHHHhCCCCEEE----EEeCCh
Confidence 456677887 99999 888754
No 162
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=23.11 E-value=41 Score=33.76 Aligned_cols=19 Identities=5% Similarity=-0.153 Sum_probs=13.9
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++.|.++||+|. ++++.
T Consensus 17 ~l~~~L~~~g~~V~----~~~r~ 35 (315)
T 2ydy_A 17 AVHKEFQQNNWHAV----GCGFR 35 (315)
T ss_dssp HHHHHHHTTTCEEE----EEC--
T ss_pred HHHHHHHhCCCeEE----EEccC
Confidence 56677899999998 77654
No 163
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=23.06 E-value=3.3e+02 Score=22.72 Aligned_cols=98 Identities=6% Similarity=0.054 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH-------ccCcEEEeCC-CCCCccHHHHHHHH-----cCCCE
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC-------DTKGAFVQPA-LYEAFGLTVVEAMT-----CGLPT 639 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la-------~~aDvfV~PS-~~E~fGl~vlEAMA-----~GlPV 639 (700)
..+.+.+..++.+....|.... +..+....+. ...|++++=. ..+.-|..+++.+. ..+|+
T Consensus 19 ~~~~l~~~L~~~g~~~~v~~~~------~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~i 92 (143)
T 2qvg_A 19 DIQSVERVFHKISSLIKIEIAK------SGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEV 92 (143)
T ss_dssp HHHHHHHHHHHHCTTCCEEEES------SHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEE
T ss_pred HHHHHHHHHHHhCCCceEEEEC------CHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcE
Confidence 3456677777776544566554 2456666665 2367777643 33455777887775 46787
Q ss_pred EEc-CCC---CcccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 640 FAT-CKG---GPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 640 VAT-~~G---G~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
|.. ... ...+.+..|..+++..|-+++++.+++....
T Consensus 93 i~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~~~~~~ 133 (143)
T 2qvg_A 93 FVLTAAYTSKDKLAFESLNIRGHLIKPLDYGEAIKLFWILQ 133 (143)
T ss_dssp EEEESCCCHHHHHHHTTTTCCEEEESSCCHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHhcCCCeEEECCCCHHHHHHHHHHHH
Confidence 763 332 2344556788999999999999999876543
No 164
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=22.41 E-value=3.6e+02 Score=25.24 Aligned_cols=114 Identities=15% Similarity=0.166 Sum_probs=67.1
Q ss_pred hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHH----ccCcEEEeCCCCCCccHHHHHHHHcCCCEEEcC-
Q 005365 569 EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC----DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC- 643 (700)
Q Consensus 569 ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la----~~aDvfV~PS~~E~fGl~vlEAMA~GlPVVAT~- 643 (700)
.+.+..++.....+++|++-.++..+..- ..+++.+|.. +.+++++.-+--++- +.=+=|-..-+|||+-.
T Consensus 18 SD~~v~~~a~~~L~~~gi~~ev~V~SaHR---~p~~~~~~~~~a~~~g~~ViIa~AG~aa~-LpgvvA~~t~~PVIgVP~ 93 (174)
T 3lp6_A 18 SDWPVMADAAAALAEFDIPAEVRVVSAHR---TPEAMFSYARGAAARGLEVIIAGAGGAAH-LPGMVAAATPLPVIGVPV 93 (174)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEECCTTT---CHHHHHHHHHHHHHHTCCEEEEEEESSCC-HHHHHHHHCSSCEEEEEE
T ss_pred HhHHHHHHHHHHHHHcCCCEEEEEECCCC---CHHHHHHHHHHHHhCCCCEEEEecCchhh-hHHHHHhccCCCEEEeeC
Confidence 34466778888889999987788888432 3567777753 236788876544432 33233445788998742
Q ss_pred ----CCCccc---ccccCCeE---EEEC---CCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 005365 644 ----KGGPAE---IIVNGKSG---YHID---PYHGEQAAEILVDFFEKCKADPSYWDKISLG 692 (700)
Q Consensus 644 ----~GG~~E---iI~dg~~G---~lv~---p~D~eaLAeaI~~ll~~~~~dp~~~~~ms~~ 692 (700)
.+|... +++- -.| -.+. +.+..-+|..|..+ .|+++|+++.+.
T Consensus 94 ~~~~l~G~daLlS~vqm-p~GvpVatV~I~~~~nAa~lAa~Il~~-----~d~~l~~kl~~~ 149 (174)
T 3lp6_A 94 PLGRLDGLDSLLSIVQM-PAGVPVATVSIGGAGNAGLLAVRMLGA-----ANPQLRARIVAF 149 (174)
T ss_dssp CCSSGGGHHHHHHHHCC-CTTCCCEECCTTCHHHHHHHHHHHHHT-----TCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHhhC-CCCCeeEEEEcCcchHHHHHHHHHHhC-----CCHHHHHHHHHH
Confidence 334332 2221 122 1222 23445555555554 799998887653
No 165
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=22.12 E-value=1.5e+02 Score=28.35 Aligned_cols=84 Identities=10% Similarity=0.067 Sum_probs=52.0
Q ss_pred CccEEEEecCCh--hhHHHHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCCCCCC---------c
Q 005365 557 ENKEHLKESKDL--EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA---------F 625 (700)
Q Consensus 557 ~~~l~i~g~Gd~--ee~~~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS~~E~---------f 625 (700)
..++.++..+.+ +..++.+.+.+..+++|. .+..+-... .+.++..+.+.+ +|.+++|- -+. .
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~--~v~~~~i~~--~~~~~~~~~l~~-ad~I~l~G-G~~~~l~~~L~~~ 100 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGL--LVEELDIAT--ESLGEITTKLRK-NDFIYVTG-GNTFFLLQELKRT 100 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTC--EEEECCTTT--SCHHHHHHHHHH-SSEEEECC-SCHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCC--eEEEEEecC--CChHHHHHHHHh-CCEEEECC-CCHHHHHHHHHHC
Confidence 455666543322 222466778888888886 366652111 234566677776 99999984 221 2
Q ss_pred cH--HHHHHHHcCCCEEEcCCCC
Q 005365 626 GL--TVVEAMTCGLPTFATCKGG 646 (700)
Q Consensus 626 Gl--~vlEAMA~GlPVVAT~~GG 646 (700)
|+ .+-|+...|+|++.++.|.
T Consensus 101 gl~~~l~~~~~~G~p~~G~sAGa 123 (206)
T 3l4e_A 101 GADKLILEEIAAGKLYIGESAGA 123 (206)
T ss_dssp THHHHHHHHHHTTCEEEEETHHH
T ss_pred ChHHHHHHHHHcCCeEEEECHHH
Confidence 22 4678888999999987554
No 166
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=22.04 E-value=1.3e+02 Score=25.79 Aligned_cols=66 Identities=11% Similarity=0.100 Sum_probs=44.4
Q ss_pred cCcEEEeCC-CCCCccHHHHHHHHc---CCCEEEc-CCCC---cccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 005365 612 TKGAFVQPA-LYEAFGLTVVEAMTC---GLPTFAT-CKGG---PAEIIVNGKSGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 612 ~aDvfV~PS-~~E~fGl~vlEAMA~---GlPVVAT-~~GG---~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
..|++++-. ..+.-|+.+++.+.. .+|||.. .... ..+.+..|..+|+..|-+++++..+|..+++
T Consensus 67 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 67 AFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp TCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 356666632 234446666665543 6777763 3322 3345667889999999999999999998874
No 167
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=21.81 E-value=59 Score=33.67 Aligned_cols=20 Identities=10% Similarity=0.072 Sum_probs=15.8
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.+++.|.++|++|. ++++..
T Consensus 43 ~l~~~L~~~g~~V~----~~~r~~ 62 (381)
T 1n7h_A 43 YLTEFLLGKGYEVH----GLIRRS 62 (381)
T ss_dssp HHHHHHHHTTCEEE----EEECCC
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 56677889999998 887754
No 168
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=21.74 E-value=2.7e+02 Score=23.62 Aligned_cols=74 Identities=8% Similarity=0.014 Sum_probs=44.5
Q ss_pred hHHHHHHHc-cCcEEEeCC-CCCCccHHHHHHHH---cCCCEEE-cCCC---CcccccccCCeEEEECCCCHHHHHHHHH
Q 005365 603 GELYRYICD-TKGAFVQPA-LYEAFGLTVVEAMT---CGLPTFA-TCKG---GPAEIIVNGKSGYHIDPYHGEQAAEILV 673 (700)
Q Consensus 603 ~el~~~la~-~aDvfV~PS-~~E~fGl~vlEAMA---~GlPVVA-T~~G---G~~EiI~dg~~G~lv~p~D~eaLAeaI~ 673 (700)
.+....+.. ..|++++=. ..+.-|+.+++.+. .++|+|. |... ...+.+..|..+|+..|-+++++.++|.
T Consensus 39 ~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~ 118 (141)
T 3cu5_A 39 INAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALK 118 (141)
T ss_dssp HHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHHHHHHH
Confidence 445555432 246666532 23445667766654 4678776 3332 2344556788999999999999999998
Q ss_pred HHH
Q 005365 674 DFF 676 (700)
Q Consensus 674 ~ll 676 (700)
.++
T Consensus 119 ~~~ 121 (141)
T 3cu5_A 119 QSI 121 (141)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 169
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=21.37 E-value=3.5e+02 Score=22.40 Aligned_cols=95 Identities=12% Similarity=0.136 Sum_probs=56.7
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHccCcEEEeCC-CCCCccHHHHHHHH--c-----CCC-EE-EcC
Q 005365 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMT--C-----GLP-TF-ATC 643 (700)
Q Consensus 574 ~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~~aDvfV~PS-~~E~fGl~vlEAMA--~-----GlP-VV-AT~ 643 (700)
...+....+..|. .|.... +..+....+....|+.++=. ....-|..+++.+. . ..| +| .|.
T Consensus 20 ~~~l~~~L~~~g~--~v~~~~------~~~~a~~~~~~~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~ 91 (136)
T 1dcf_A 20 RMVTKGLLVHLGC--EVTTVS------SNEECLRVVSHEHKVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSG 91 (136)
T ss_dssp HHHHHHHHHHTTC--EEEEES------SHHHHHHHCCTTCSEEEEECCSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEES
T ss_pred HHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhccCCEEEEeCCCCCCcHHHHHHHHHHhhhhccCCCceEEEEeC
Confidence 3455666665543 343322 23555565544347777632 22344666666664 1 344 54 454
Q ss_pred CCCc---ccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 644 KGGP---AEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 644 ~GG~---~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
.... .+.+..|..||+..|-+++++.++|..++
T Consensus 92 ~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~ 127 (136)
T 1dcf_A 92 NTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLL 127 (136)
T ss_dssp CCSHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCeEEECCCCHHHHHHHHHHHh
Confidence 4433 23455788999999999999999998886
No 170
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=21.34 E-value=1.6e+02 Score=24.33 Aligned_cols=95 Identities=16% Similarity=0.158 Sum_probs=59.4
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCC-CCCCccHHHHHHHH-----cCCCEEE-cCCC
Q 005365 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPA-LYEAFGLTVVEAMT-----CGLPTFA-TCKG 645 (700)
Q Consensus 574 ~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS-~~E~fGl~vlEAMA-----~GlPVVA-T~~G 645 (700)
...+....++.|. .|.... +..+..+.+.. ..|++++=. ..+.-|+.+++.+. ..+|+|. |..+
T Consensus 15 ~~~l~~~l~~~g~--~v~~~~------~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 15 RKIVSFNLKKEGY--EVIEAE------NGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHHHHTTC--EEEEES------SHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHHHCCc--EEEEeC------CHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 3455555655543 243322 23555555543 246666632 34556778888774 3578876 4433
Q ss_pred Cc---ccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 646 GP---AEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 646 G~---~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
.. .+.+..|..+|+..|-+++++.++|..++
T Consensus 87 ~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l 120 (122)
T 3gl9_A 87 GEEDESLALSLGARKVMRKPFSPSQFIEEVKHLL 120 (122)
T ss_dssp SHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred chHHHHHHHhcChhhhccCCCCHHHHHHHHHHHh
Confidence 32 33445788999999999999999998876
No 171
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=20.94 E-value=75 Score=28.04 Aligned_cols=19 Identities=16% Similarity=0.328 Sum_probs=14.8
Q ss_pred HHHHHHHHHHCCCceeeccEEEe
Q 005365 314 EDEMLLRIKQQGLDITPQILIIT 336 (700)
Q Consensus 314 ~~eLa~~L~~~GheV~~~i~VvT 336 (700)
.+.+++.+.+.|++|+ ++.
T Consensus 19 A~~ia~~l~~~g~~v~----~~~ 37 (148)
T 3f6r_A 19 AQKLEELIAAGGHEVT----LLN 37 (148)
T ss_dssp HHHHHHHHHTTTCEEE----EEE
T ss_pred HHHHHHHHHhCCCeEE----EEe
Confidence 3467788889999998 764
No 172
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=20.78 E-value=68 Score=32.63 Aligned_cols=20 Identities=5% Similarity=0.087 Sum_probs=16.1
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.+++.|.++||+|. ++++..
T Consensus 40 ~l~~~L~~~g~~V~----~~~r~~ 59 (351)
T 3ruf_A 40 NLLEKLLKLNQVVI----GLDNFS 59 (351)
T ss_dssp HHHHHHHHTTCEEE----EEECCS
T ss_pred HHHHHHHHCCCEEE----EEeCCC
Confidence 56677899999998 888754
No 173
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=20.77 E-value=82 Score=29.23 Aligned_cols=16 Identities=13% Similarity=0.331 Sum_probs=12.7
Q ss_pred HHHHHHHHHHCCCcee
Q 005365 314 EDEMLLRIKQQGLDIT 329 (700)
Q Consensus 314 ~~eLa~~L~~~GheV~ 329 (700)
.+.+++.+.+.|++|+
T Consensus 23 a~~i~~~l~~~g~~v~ 38 (200)
T 2a5l_A 23 ARQIARGVEQGGFEAR 38 (200)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhhCCCEEE
Confidence 3467778888999998
No 174
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=20.74 E-value=2.6e+02 Score=22.94 Aligned_cols=95 Identities=13% Similarity=0.249 Sum_probs=57.7
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCC-CCCCccHHHHHHHH---cCCCEEE-cCCCC-
Q 005365 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPA-LYEAFGLTVVEAMT---CGLPTFA-TCKGG- 646 (700)
Q Consensus 574 ~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS-~~E~fGl~vlEAMA---~GlPVVA-T~~GG- 646 (700)
.+.+....+..+. .+.... +..+....+.. ..|++++=. ....-|..+++.+. ..+|+|. |....
T Consensus 16 ~~~l~~~l~~~~~--~v~~~~------~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~ 87 (126)
T 1dbw_A 16 RKSLAFMLTMNGF--AVKMHQ------SAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDV 87 (126)
T ss_dssp HHHHHHHHHHTTC--EEEEES------CHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCH
T ss_pred HHHHHHHHHhCCc--EEEEeC------CHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCH
Confidence 3455565655443 243322 23455555543 246666532 22345666776664 4678876 33333
Q ss_pred --cccccccCCeEEEECCCCHHHHHHHHHHHH
Q 005365 647 --PAEIIVNGKSGYHIDPYHGEQAAEILVDFF 676 (700)
Q Consensus 647 --~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll 676 (700)
..+.+..|..||+..|.+++++.++|..++
T Consensus 88 ~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~ 119 (126)
T 1dbw_A 88 PMAVEAMKAGAVDFIEKPFEDTVIIEAIERAS 119 (126)
T ss_dssp HHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHheeCCCCHHHHHHHHHHHH
Confidence 234456788999999999999999998876
No 175
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=20.74 E-value=24 Score=26.88 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=15.5
Q ss_pred cceeeecCHHHHhhhccccc
Q 005365 104 ALVVEELLVAEYLHFKEELV 123 (700)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~ 123 (700)
||+=.++|++|||++|-.|+
T Consensus 4 dlsDgpit~qeylevK~ALa 23 (63)
T 2w6a_A 4 GSSDGAVTLQEYLELKKALA 23 (63)
T ss_dssp C--CCSSCHHHHHHHHHHHH
T ss_pred cccCCcchHHHHHHHHHHHH
Confidence 56667899999999998876
No 176
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=20.57 E-value=3.9e+02 Score=22.66 Aligned_cols=99 Identities=6% Similarity=0.047 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc--------cCcEEEeCC-CCCCccHHHHHHHHc-----CCC
Q 005365 573 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD--------TKGAFVQPA-LYEAFGLTVVEAMTC-----GLP 638 (700)
Q Consensus 573 ~~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~--------~aDvfV~PS-~~E~fGl~vlEAMA~-----GlP 638 (700)
....+....+..+....|.... +..+...++.. ..|++++=- ..+.-|+.+++.+.. .+|
T Consensus 20 ~~~~l~~~L~~~~~~~~v~~~~------~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~p 93 (149)
T 1i3c_A 20 DSRLVQEVLKTSTIDHELIILR------DGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIP 93 (149)
T ss_dssp HHHHHHHHHHSCCSCEEEEEEC------SHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSC
T ss_pred HHHHHHHHHHhcCCCccEEEeC------CHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCe
Confidence 3455666666544322343332 23566666652 367777643 234457777777753 568
Q ss_pred EEE-cCCCC---cccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 005365 639 TFA-TCKGG---PAEIIVNGKSGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 639 VVA-T~~GG---~~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
+|. |.... ..+.++.|..||+..|.+.+++.++|..++.
T Consensus 94 iiils~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~ 136 (149)
T 1i3c_A 94 VVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIES 136 (149)
T ss_dssp EEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHH
Confidence 776 33332 3344567889999999999999999988763
No 177
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=20.54 E-value=62 Score=30.91 Aligned_cols=20 Identities=20% Similarity=0.268 Sum_probs=15.9
Q ss_pred HHHHHHHHCCCceeeccEEEeccC
Q 005365 316 EMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
.+++.|.++||+|. ++++..
T Consensus 36 ~l~~~L~~~G~~V~----~~~R~~ 55 (236)
T 3e8x_A 36 YLLSELKNKGHEPV----AMVRNE 55 (236)
T ss_dssp HHHHHHHHTTCEEE----EEESSG
T ss_pred HHHHHHHhCCCeEE----EEECCh
Confidence 56677899999998 888753
No 178
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=20.37 E-value=2e+02 Score=24.60 Aligned_cols=42 Identities=5% Similarity=0.067 Sum_probs=27.7
Q ss_pred CcceEEEEEccccccccCCcCCCCCcCcchhhhHHHHHHHHHHHHHHHHHCCCceeeccEEEeccC
Q 005365 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (700)
Q Consensus 274 pm~mkI~iis~h~~~~~~~~lG~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~i~VvT~~~ 339 (700)
..++||+++|..|. |.... |...|-+.+.+.|.++. |-+...
T Consensus 19 ~~~kkIlvvC~sG~-------------gTS~l-------l~~kl~~~~~~~gi~~~----V~~~~~ 60 (113)
T 1tvm_A 19 GSKRKIIVACGGAV-------------ATSTM-------AAEEIKELCQSHNIPVE----LIQCRV 60 (113)
T ss_dssp CSSEEEEEESCSCS-------------SHHHH-------HHHHHHHHHHHTTCCEE----EEEECT
T ss_pred ccccEEEEECCCCH-------------HHHHH-------HHHHHHHHHHHcCCeEE----EEEecH
Confidence 34589999997664 32222 23367778899999987 655443
No 179
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=20.20 E-value=1.6e+02 Score=24.68 Aligned_cols=99 Identities=7% Similarity=0.089 Sum_probs=60.8
Q ss_pred HHHHHHHHHHH-cCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeCC-CCCCccHHHHHHHHc-----CCCEEE-cC
Q 005365 573 EMKKMYSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPA-LYEAFGLTVVEAMTC-----GLPTFA-TC 643 (700)
Q Consensus 573 ~~~~l~~li~~-l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~PS-~~E~fGl~vlEAMA~-----GlPVVA-T~ 643 (700)
....+....++ .+.. .|.... +..+....+.. ..|++++-. ..+.-|+.+++.+.. .+|+|. |.
T Consensus 20 ~~~~l~~~L~~~~~~~-~v~~~~------~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 92 (143)
T 3cnb_A 20 FADMLTQFLENLFPYA-KIKIAY------NPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTG 92 (143)
T ss_dssp HHHHHHHHHHHHCTTC-EEEEEC------SHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEES
T ss_pred HHHHHHHHHHhccCcc-EEEEEC------CHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeC
Confidence 34556666665 4432 143332 13445554432 256666643 334557777777754 578776 33
Q ss_pred CCCc---ccccccCCeEEEECCCCHHHHHHHHHHHHHh
Q 005365 644 KGGP---AEIIVNGKSGYHIDPYHGEQAAEILVDFFEK 678 (700)
Q Consensus 644 ~GG~---~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~~ 678 (700)
.... .+.+..|..+++..|-+++++.++|..++++
T Consensus 93 ~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 130 (143)
T 3cnb_A 93 ALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQLVEQ 130 (143)
T ss_dssp SCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 3332 3455678899999999999999999998853
No 180
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=20.20 E-value=60 Score=32.86 Aligned_cols=19 Identities=16% Similarity=0.209 Sum_probs=14.8
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++.|.++||+|. ++++.
T Consensus 24 ~l~~~Ll~~G~~V~----~~~r~ 42 (338)
T 2rh8_A 24 LLVKLLLQKGYAVN----TTVRD 42 (338)
T ss_dssp HHHHHHHHTTCEEE----EEESC
T ss_pred HHHHHHHHCCCEEE----EEEcC
Confidence 56677889999998 76664
No 181
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=20.19 E-value=69 Score=32.18 Aligned_cols=19 Identities=16% Similarity=0.536 Sum_probs=15.2
Q ss_pred HHHHHHHHCCCceeeccEEEecc
Q 005365 316 EMLLRIKQQGLDITPQILIITRL 338 (700)
Q Consensus 316 eLa~~L~~~GheV~~~i~VvT~~ 338 (700)
.+++.|.++||+|. ++++.
T Consensus 16 ~l~~~L~~~g~~V~----~~~r~ 34 (330)
T 2c20_A 16 HAVKKLVDEGLSVV----VVDNL 34 (330)
T ss_dssp HHHHHHHHTTCEEE----EEECC
T ss_pred HHHHHHHhCCCEEE----EEeCC
Confidence 56677899999998 87764
No 182
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=20.10 E-value=1.6e+02 Score=24.88 Aligned_cols=96 Identities=15% Similarity=0.192 Sum_probs=58.3
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChhHHHHHHHc-cCcEEEeC-CCCCCccHHHHHHHHc-----CCCEEE-cCCC
Q 005365 574 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQP-ALYEAFGLTVVEAMTC-----GLPTFA-TCKG 645 (700)
Q Consensus 574 ~~~l~~li~~l~L~~~V~flG~~~d~v~~~el~~~la~-~aDvfV~P-S~~E~fGl~vlEAMA~-----GlPVVA-T~~G 645 (700)
.+.+....++.|. .|.... +..+..+.+.. ..|++++= ...+.-|+.+++.+.. .+|+|. |..+
T Consensus 17 ~~~l~~~L~~~g~--~v~~~~------~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 17 AEMLELVLRGAGY--EVRRAA------SGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHHHHTTC--EEEEES------SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHHHHHCCC--EEEEeC------CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 3455555555543 233221 23444444432 24666653 2334557777777643 578876 3333
Q ss_pred Cc---ccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 005365 646 GP---AEIIVNGKSGYHIDPYHGEQAAEILVDFFE 677 (700)
Q Consensus 646 G~---~EiI~dg~~G~lv~p~D~eaLAeaI~~ll~ 677 (700)
.. .+.+..|..+|+..|-+++++.++|..++.
T Consensus 89 ~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~l~ 123 (136)
T 3t6k_A 89 DISAKIAGFEAGANDYLAKPFEPQELVYRVKNILA 123 (136)
T ss_dssp CHHHHHHHHHHTCSEEEETTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCcceEEeCCCCHHHHHHHHHHHHh
Confidence 32 334557889999999999999999999884
Done!