Query 005374
Match_columns 699
No_of_seqs 520 out of 3315
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 23:32:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005374.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005374hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 3.9E-46 1.3E-50 442.9 22.7 367 36-477 20-400 (780)
2 3us3_A Calsequestrin-1; calciu 100.0 2E-36 7E-41 329.6 26.8 322 136-559 13-348 (367)
3 1sji_A Calsequestrin 2, calseq 100.0 1.2E-34 4.2E-39 313.0 30.3 320 136-559 11-346 (350)
4 2r2j_A Thioredoxin domain-cont 100.0 1.2E-34 4E-39 317.1 22.7 335 134-578 3-346 (382)
5 3apq_A DNAJ homolog subfamily 100.0 1.6E-36 5.5E-41 304.4 6.6 197 37-253 2-201 (210)
6 3f8u_A Protein disulfide-isome 100.0 4.3E-33 1.5E-37 312.8 28.8 331 137-577 2-350 (481)
7 2b5e_A Protein disulfide-isome 100.0 1.7E-32 5.8E-37 310.0 21.6 336 135-576 13-355 (504)
8 3ed3_A Protein disulfide-isome 99.9 5.6E-27 1.9E-31 248.3 16.1 230 135-388 16-282 (298)
9 3apo_A DNAJ homolog subfamily 99.9 2.4E-24 8.2E-29 255.7 28.1 287 137-502 441-736 (780)
10 3idv_A Protein disulfide-isome 99.9 1.1E-23 3.7E-28 213.5 17.7 209 136-366 15-238 (241)
11 3q6o_A Sulfhydryl oxidase 1; p 99.9 7.9E-21 2.7E-25 194.4 17.4 207 137-360 13-235 (244)
12 3t58_A Sulfhydryl oxidase 1; o 99.8 7.3E-19 2.5E-23 199.2 17.0 191 137-342 13-217 (519)
13 2ywm_A Glutaredoxin-like prote 99.8 1.2E-18 4.3E-23 175.7 14.0 189 152-363 19-218 (229)
14 1a8l_A Protein disulfide oxido 99.8 1.7E-18 5.8E-23 174.0 12.3 193 152-363 21-224 (226)
15 3uem_A Protein disulfide-isome 99.8 2.6E-18 8.8E-23 185.4 14.4 209 137-365 118-357 (361)
16 3h79_A Thioredoxin-like protei 99.8 5E-19 1.7E-23 162.3 7.4 106 136-252 15-126 (127)
17 2h8l_A Protein disulfide-isome 99.7 1.6E-16 5.5E-21 163.5 21.4 228 255-577 4-246 (252)
18 3ec3_A Protein disulfide-isome 99.7 5.2E-16 1.8E-20 159.7 22.7 228 255-578 4-245 (250)
19 2och_A Hypothetical protein DN 99.7 4.2E-18 1.4E-22 142.5 5.4 67 36-102 7-73 (73)
20 1hdj_A Human HSP40, HDJ-1; mol 99.7 1.2E-17 4.2E-22 141.1 6.1 69 36-104 2-72 (77)
21 2dml_A Protein disulfide-isome 99.7 7E-17 2.4E-21 147.9 10.1 110 136-257 17-127 (130)
22 2o37_A Protein SIS1; HSP40, J- 99.7 1.9E-17 6.6E-22 144.8 4.4 70 36-105 7-76 (92)
23 2ctp_A DNAJ homolog subfamily 99.7 2.8E-17 9.6E-22 139.2 4.7 69 35-103 5-75 (78)
24 2dn9_A DNAJ homolog subfamily 99.7 4.2E-17 1.4E-21 138.4 5.1 68 36-103 6-76 (79)
25 2ej7_A HCG3 gene; HCG3 protein 99.7 6.9E-17 2.4E-21 138.1 5.5 68 36-103 8-79 (82)
26 3zzx_A Thioredoxin; oxidoreduc 99.6 3.4E-17 1.1E-21 146.5 3.5 99 139-252 3-104 (105)
27 2cug_A Mkiaa0962 protein; DNAJ 99.6 5E-17 1.7E-21 140.9 4.1 68 36-103 16-85 (88)
28 2ctr_A DNAJ homolog subfamily 99.6 7.5E-17 2.6E-21 139.8 4.1 69 36-104 6-76 (88)
29 1x5d_A Protein disulfide-isome 99.6 1.7E-16 5.7E-21 145.6 5.5 107 135-254 6-117 (133)
30 2djj_A PDI, protein disulfide- 99.6 4.8E-16 1.6E-20 140.3 8.4 103 136-252 7-115 (121)
31 2voc_A Thioredoxin; electron t 99.6 2.4E-16 8.3E-21 141.1 6.2 101 138-252 3-103 (112)
32 2dj1_A Protein disulfide-isome 99.6 2.8E-16 9.4E-21 145.7 6.7 104 136-253 17-123 (140)
33 3gnj_A Thioredoxin domain prot 99.6 9.9E-17 3.4E-21 142.2 3.4 103 137-252 5-108 (111)
34 2lgw_A DNAJ homolog subfamily 99.6 1.2E-16 4E-21 141.6 3.6 68 37-104 2-73 (99)
35 3uvt_A Thioredoxin domain-cont 99.6 9.6E-17 3.3E-21 142.1 3.1 104 135-252 4-110 (111)
36 1bq0_A DNAJ, HSP40; chaperone, 99.6 1.6E-16 5.6E-21 141.8 4.4 69 36-104 2-73 (103)
37 3uem_A Protein disulfide-isome 99.6 1.1E-13 3.8E-18 149.0 27.5 321 137-559 18-357 (361)
38 2ctw_A DNAJ homolog subfamily 99.6 3.1E-16 1.1E-20 141.4 6.2 70 36-105 16-88 (109)
39 3ga4_A Dolichyl-diphosphooligo 99.6 4.3E-16 1.5E-20 152.3 7.3 108 137-253 19-152 (178)
40 2dj3_A Protein disulfide-isome 99.6 3.7E-16 1.3E-20 143.6 6.5 107 135-252 6-116 (133)
41 1mek_A Protein disulfide isome 99.6 4.1E-16 1.4E-20 139.5 6.6 105 137-252 8-115 (120)
42 2ctq_A DNAJ homolog subfamily 99.6 1.8E-16 6.2E-21 143.7 3.8 69 36-104 19-90 (112)
43 2trx_A Thioredoxin; electron t 99.6 3.9E-16 1.3E-20 137.8 5.5 103 137-252 3-106 (108)
44 3tco_A Thioredoxin (TRXA-1); d 99.6 2.3E-16 7.9E-21 138.9 4.0 103 137-252 5-107 (109)
45 3die_A Thioredoxin, TRX; elect 99.6 3.1E-16 1.1E-20 137.6 4.6 102 137-252 4-105 (106)
46 2dmx_A DNAJ homolog subfamily 99.6 1.9E-16 6.7E-21 138.4 2.9 69 36-104 8-80 (92)
47 3p2a_A Thioredoxin 2, putative 99.6 5.6E-16 1.9E-20 145.7 6.3 105 137-254 39-143 (148)
48 3qou_A Protein YBBN; thioredox 99.6 1.3E-15 4.4E-20 158.8 9.3 106 137-258 8-115 (287)
49 2i4a_A Thioredoxin; acidophIle 99.6 6.6E-16 2.3E-20 135.7 5.3 103 137-252 3-106 (107)
50 1t00_A Thioredoxin, TRX; redox 99.6 7.2E-16 2.5E-20 137.2 5.5 104 136-252 5-109 (112)
51 1thx_A Thioredoxin, thioredoxi 99.6 1E-15 3.5E-20 136.3 6.5 103 137-252 8-111 (115)
52 1nsw_A Thioredoxin, TRX; therm 99.6 3.6E-16 1.2E-20 137.3 3.4 102 138-252 2-103 (105)
53 3aps_A DNAJ homolog subfamily 99.6 3.4E-16 1.2E-20 141.6 3.2 108 136-256 3-115 (122)
54 2yua_A Williams-beuren syndrom 99.6 7.7E-16 2.6E-20 136.4 5.3 67 36-102 16-85 (99)
55 2e0q_A Thioredoxin; electron t 99.6 4.8E-16 1.7E-20 135.3 3.9 101 138-252 1-101 (104)
56 2o8v_B Thioredoxin 1; disulfid 99.6 7E-16 2.4E-20 142.2 4.7 106 134-252 20-126 (128)
57 4f9z_D Endoplasmic reticulum r 99.6 1.3E-13 4.6E-18 139.4 21.8 204 262-559 14-225 (227)
58 3hz4_A Thioredoxin; NYSGXRC, P 99.6 5.9E-16 2E-20 144.6 4.0 104 137-253 7-111 (140)
59 2yzu_A Thioredoxin; redox prot 99.6 5.2E-16 1.8E-20 136.5 3.4 103 137-252 2-104 (109)
60 4euy_A Uncharacterized protein 99.6 5.7E-16 2E-20 136.9 3.4 98 141-252 6-103 (105)
61 1x5e_A Thioredoxin domain cont 99.6 1.6E-15 5.3E-20 138.4 6.3 102 135-252 6-108 (126)
62 1wjz_A 1700030A21RIK protein; 99.6 3.7E-16 1.3E-20 137.0 1.9 65 36-100 15-88 (94)
63 3hxs_A Thioredoxin, TRXP; elec 99.6 1.6E-15 5.4E-20 140.9 6.0 104 136-252 22-137 (141)
64 2qgv_A Hydrogenase-1 operon pr 99.6 5.2E-16 1.8E-20 145.6 2.6 103 138-253 19-124 (140)
65 2l5l_A Thioredoxin; structural 99.6 2.1E-15 7.2E-20 140.0 6.5 106 135-254 8-126 (136)
66 2ppt_A Thioredoxin-2; thiredox 99.6 1E-15 3.5E-20 146.1 4.4 104 137-253 48-151 (155)
67 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 5.4E-16 1.9E-20 139.8 2.3 68 36-103 14-88 (109)
68 1fb6_A Thioredoxin M; electron 99.6 1.7E-15 5.7E-20 132.6 5.2 102 138-252 2-104 (105)
69 1dby_A Chloroplast thioredoxin 99.6 1.1E-15 3.8E-20 134.6 4.1 102 138-252 3-105 (107)
70 2c0g_A ERP29 homolog, windbeut 99.6 3.9E-15 1.3E-19 153.2 8.4 105 136-253 16-131 (248)
71 1oaz_A Thioredoxin 1; immune s 99.6 1.5E-15 5.1E-20 139.1 4.7 103 137-252 4-121 (123)
72 2qsi_A Putative hydrogenase ex 99.6 1.3E-15 4.6E-20 142.3 4.3 103 138-253 17-122 (137)
73 2i1u_A Thioredoxin, TRX, MPT46 99.5 1.2E-15 4.1E-20 137.4 3.4 105 135-252 11-116 (121)
74 2hls_A Protein disulfide oxido 99.5 4.4E-14 1.5E-18 144.8 15.2 194 146-366 17-227 (243)
75 3qfa_C Thioredoxin; protein-pr 99.5 9.2E-16 3.1E-20 138.6 2.3 99 139-252 15-115 (116)
76 1w4v_A Thioredoxin, mitochondr 99.5 1.6E-15 5.4E-20 137.4 3.8 103 137-252 14-117 (119)
77 3idv_A Protein disulfide-isome 99.5 6.1E-15 2.1E-19 148.9 8.0 103 137-253 131-236 (241)
78 2dj0_A Thioredoxin-related tra 99.5 9.9E-16 3.4E-20 142.2 2.0 110 136-252 7-119 (137)
79 2es7_A Q8ZP25_salty, putative 99.5 9.4E-15 3.2E-19 137.8 8.5 102 138-253 19-124 (142)
80 1gh6_A Large T antigen; tumor 99.5 9.8E-16 3.4E-20 138.9 1.0 65 36-101 7-73 (114)
81 4f9z_D Endoplasmic reticulum r 99.5 5.2E-14 1.8E-18 142.5 13.6 202 137-363 10-223 (227)
82 2pu9_C TRX-F, thioredoxin F-ty 99.5 6.4E-15 2.2E-19 131.1 5.8 102 136-252 5-109 (111)
83 3ul3_B Thioredoxin, thioredoxi 99.5 6.7E-15 2.3E-19 135.0 5.6 97 142-251 31-127 (128)
84 3dxb_A Thioredoxin N-terminall 99.5 4.9E-15 1.7E-19 149.5 5.0 106 135-253 11-117 (222)
85 2qc7_A ERP31, ERP28, endoplasm 99.5 1E-14 3.5E-19 149.4 7.4 102 137-253 6-118 (240)
86 1v98_A Thioredoxin; oxidoreduc 99.5 7.9E-15 2.7E-19 136.5 5.5 105 136-253 33-137 (140)
87 1r26_A Thioredoxin; redox-acti 99.5 4.6E-15 1.6E-19 136.3 3.8 100 138-252 21-121 (125)
88 2ys8_A RAB-related GTP-binding 99.5 7.1E-15 2.4E-19 127.9 4.6 60 36-95 26-87 (90)
89 1xwb_A Thioredoxin; dimerizati 99.5 4.9E-15 1.7E-19 129.9 3.4 101 138-252 2-105 (106)
90 1gh2_A Thioredoxin-like protei 99.5 7.2E-15 2.5E-19 129.9 4.4 100 138-252 3-105 (107)
91 3d6i_A Monothiol glutaredoxin- 99.5 9.5E-15 3.2E-19 130.0 4.9 101 138-252 2-107 (112)
92 1faf_A Large T antigen; J doma 99.5 6.1E-15 2.1E-19 125.1 3.3 65 37-103 11-77 (79)
93 1ep7_A Thioredoxin CH1, H-type 99.5 4.4E-15 1.5E-19 131.9 2.5 102 137-252 3-109 (112)
94 2pf4_E Small T antigen; PP2A, 99.5 2.6E-15 8.8E-20 145.3 0.8 65 36-101 10-76 (174)
95 2yj7_A LPBCA thioredoxin; oxid 99.2 2.4E-15 8.2E-20 131.3 0.0 102 138-252 3-105 (106)
96 3f3q_A Thioredoxin-1; His TAG, 99.5 9.4E-15 3.2E-19 130.3 3.8 99 139-252 10-108 (109)
97 2vlu_A Thioredoxin, thioredoxi 99.5 9.6E-15 3.3E-19 132.0 3.3 101 137-252 14-118 (122)
98 3m9j_A Thioredoxin; oxidoreduc 99.5 7.8E-15 2.7E-19 128.5 2.5 96 142-252 7-104 (105)
99 2l6l_A DNAJ homolog subfamily 99.5 9.5E-15 3.3E-19 139.9 3.2 67 36-102 9-84 (155)
100 2l57_A Uncharacterized protein 99.5 3.4E-14 1.1E-18 129.5 6.3 103 138-253 6-116 (126)
101 1faa_A Thioredoxin F; electron 99.5 2E-14 6.7E-19 130.5 4.6 103 135-252 17-122 (124)
102 2xc2_A Thioredoxinn; oxidoredu 99.5 1.3E-14 4.5E-19 130.5 3.3 100 137-252 14-116 (117)
103 2l6c_A Thioredoxin; oxidoreduc 99.5 2.3E-14 7.9E-19 128.0 4.5 99 139-252 6-104 (110)
104 1zma_A Bacterocin transport ac 99.5 5E-15 1.7E-19 133.6 -0.1 101 138-250 14-117 (118)
105 1syr_A Thioredoxin; SGPP, stru 99.5 9.6E-15 3.3E-19 130.5 1.7 100 138-252 11-110 (112)
106 3lz8_A Putative chaperone DNAJ 99.5 5.3E-15 1.8E-19 157.9 0.0 67 36-102 27-95 (329)
107 2av4_A Thioredoxin-like protei 99.5 2.1E-14 7.1E-19 136.7 3.9 104 138-252 23-137 (160)
108 3emx_A Thioredoxin; structural 99.4 1.2E-14 4.1E-19 134.9 1.4 99 137-252 17-124 (135)
109 2vim_A Thioredoxin, TRX; thior 99.4 2.6E-14 8.8E-19 124.8 3.4 99 139-252 2-103 (104)
110 3gix_A Thioredoxin-like protei 99.4 2.3E-14 7.9E-19 135.8 2.6 104 140-252 8-119 (149)
111 2j23_A Thioredoxin; immune pro 99.4 3.8E-14 1.3E-18 128.7 3.7 102 137-252 16-119 (121)
112 2oe3_A Thioredoxin-3; electron 99.4 2E-14 6.9E-19 129.6 1.4 99 138-251 14-113 (114)
113 1iur_A KIAA0730 protein; DNAJ 99.4 4.7E-14 1.6E-18 122.0 2.7 61 36-96 15-79 (88)
114 3evi_A Phosducin-like protein 99.4 5.6E-14 1.9E-18 128.4 3.2 99 137-252 4-112 (118)
115 3qcp_A QSOX from trypanosoma b 99.4 2.2E-14 7.7E-19 159.4 0.5 106 135-252 22-137 (470)
116 1a8l_A Protein disulfide oxido 99.4 7.9E-14 2.7E-18 139.8 4.1 101 139-252 119-224 (226)
117 2b5e_A Protein disulfide-isome 99.4 1.4E-13 4.9E-18 155.1 6.6 104 136-252 358-465 (504)
118 2wz9_A Glutaredoxin-3; protein 99.4 5.6E-14 1.9E-18 133.2 2.7 103 136-253 12-117 (153)
119 3d22_A TRXH4, thioredoxin H-ty 99.4 6.8E-14 2.3E-18 129.7 2.8 105 138-257 26-135 (139)
120 3hho_A CO-chaperone protein HS 99.4 9.9E-14 3.4E-18 135.2 3.4 63 36-98 3-75 (174)
121 1n4c_A Auxilin; four helix bun 99.4 2.3E-13 7.9E-18 132.5 5.4 61 36-96 116-182 (182)
122 2qwo_B Putative tyrosine-prote 99.4 2E-13 6.8E-18 118.6 4.2 53 37-89 33-91 (92)
123 1qgv_A Spliceosomal protein U5 99.4 9.8E-14 3.3E-18 130.4 2.2 102 142-252 10-119 (142)
124 1xfl_A Thioredoxin H1; AT3G510 99.4 9.5E-14 3.2E-18 127.0 2.0 101 137-252 17-122 (124)
125 2dbc_A PDCL2, unnamed protein 99.4 2E-13 6.7E-18 127.0 3.7 101 135-252 9-119 (135)
126 2vm1_A Thioredoxin, thioredoxi 99.4 1.6E-13 5.5E-18 122.7 2.6 102 137-253 7-113 (118)
127 3uo3_A J-type CO-chaperone JAC 99.4 1.5E-13 5E-18 134.6 2.5 67 32-98 6-79 (181)
128 1fpo_A HSC20, chaperone protei 99.3 1.7E-13 6E-18 133.1 2.6 62 38-99 2-73 (171)
129 2f51_A Thioredoxin; electron t 99.3 1.5E-13 5.2E-18 124.4 1.4 100 138-252 5-111 (118)
130 3cxg_A Putative thioredoxin; m 99.3 2.2E-13 7.6E-18 126.2 2.4 103 136-252 20-127 (133)
131 1wmj_A Thioredoxin H-type; str 99.3 2E-13 6.7E-18 124.4 1.8 102 138-254 16-122 (130)
132 1ti3_A Thioredoxin H, PTTRXH1; 99.3 1.2E-13 4.2E-18 122.5 0.3 101 137-252 5-110 (113)
133 3bvo_A CO-chaperone protein HS 99.3 4.2E-13 1.4E-17 134.1 4.1 63 36-98 42-114 (207)
134 2guz_A Mitochondrial import in 99.3 3.4E-13 1.2E-17 112.0 2.7 57 37-94 14-71 (71)
135 3f8u_A Protein disulfide-isome 99.3 3.3E-10 1.1E-14 126.6 27.4 320 138-559 112-461 (481)
136 2kuc_A Putative disulphide-iso 99.3 5.5E-13 1.9E-17 121.8 3.8 103 139-252 9-119 (130)
137 3ag7_A Putative uncharacterize 99.3 4.5E-13 1.6E-17 119.9 2.6 55 36-91 40-104 (106)
138 2trc_P Phosducin, MEKA, PP33; 99.3 2E-13 6.9E-18 137.8 0.2 101 137-252 100-211 (217)
139 1fo5_A Thioredoxin; disulfide 99.3 3.3E-12 1.1E-16 107.4 7.3 82 154-252 3-84 (85)
140 1nho_A Probable thioredoxin; b 99.3 4.6E-12 1.6E-16 106.4 7.9 81 155-252 3-83 (85)
141 1a0r_P Phosducin, MEKA, PP33; 99.3 9E-13 3.1E-17 135.3 1.9 102 136-252 112-224 (245)
142 1sji_A Calsequestrin 2, calseq 99.2 7.4E-11 2.5E-15 126.8 16.1 203 137-364 124-345 (350)
143 2ywm_A Glutaredoxin-like prote 99.2 2.3E-12 7.9E-17 129.6 4.0 99 138-253 120-219 (229)
144 2fwh_A Thiol:disulfide interch 99.2 2.1E-12 7E-17 119.5 3.2 103 141-252 17-126 (134)
145 3us3_A Calsequestrin-1; calciu 99.2 7.8E-11 2.7E-15 127.7 16.0 207 137-366 126-349 (367)
146 3kp8_A Vkorc1/thioredoxin doma 99.2 8.2E-13 2.8E-17 118.1 0.2 78 153-251 12-92 (106)
147 3fk8_A Disulphide isomerase; A 99.2 5.5E-12 1.9E-16 115.8 5.7 92 151-252 27-131 (133)
148 2djk_A PDI, protein disulfide- 99.2 5.2E-12 1.8E-16 117.0 4.4 101 138-253 8-114 (133)
149 2lst_A Thioredoxin; structural 98.8 1.4E-12 4.9E-17 119.1 0.0 100 145-253 11-115 (130)
150 1wou_A Thioredoxin -related pr 99.2 3E-12 1E-16 116.7 1.8 100 137-250 6-121 (123)
151 2hls_A Protein disulfide oxido 99.2 1.6E-11 5.4E-16 125.8 7.3 85 152-253 137-225 (243)
152 2h8l_A Protein disulfide-isome 99.2 5.3E-10 1.8E-14 114.7 17.6 203 138-366 8-231 (252)
153 3f9u_A Putative exported cytoc 99.1 2.5E-11 8.6E-16 116.6 3.2 104 139-252 29-164 (172)
154 1sen_A Thioredoxin-like protei 99.1 2.3E-11 7.9E-16 116.9 1.3 98 146-253 39-147 (164)
155 1ilo_A Conserved hypothetical 99.0 1.5E-10 5.2E-15 95.6 4.9 73 157-249 3-76 (77)
156 3ec3_A Protein disulfide-isome 99.0 2E-09 6.9E-14 110.3 13.4 203 138-366 8-229 (250)
157 3dml_A Putative uncharacterize 99.0 4.1E-11 1.4E-15 108.9 0.6 90 152-254 17-110 (116)
158 2ju5_A Thioredoxin disulfide i 99.0 4E-10 1.4E-14 106.8 6.1 98 144-252 34-150 (154)
159 3iv4_A Putative oxidoreductase 99.0 8.8E-11 3E-15 105.7 0.7 100 139-249 9-111 (112)
160 2b5x_A YKUV protein, TRXY; thi 98.9 8.3E-10 2.8E-14 101.7 6.3 104 140-253 16-144 (148)
161 1lu4_A Soluble secreted antige 98.9 1.2E-09 4.1E-14 99.3 6.7 89 152-252 23-134 (136)
162 1zzo_A RV1677; thioredoxin fol 98.9 1.7E-09 5.8E-14 98.0 6.7 90 152-252 24-133 (136)
163 3kp9_A Vkorc1/thioredoxin doma 98.9 2.3E-10 7.8E-15 120.0 0.3 76 156-252 200-278 (291)
164 2h30_A Thioredoxin, peptide me 98.9 9E-10 3.1E-14 103.9 4.2 101 139-252 24-154 (164)
165 3raz_A Thioredoxin-related pro 98.9 2.1E-09 7.2E-14 100.5 6.7 93 152-252 23-138 (151)
166 3erw_A Sporulation thiol-disul 98.8 1.8E-09 6.2E-14 99.0 5.4 88 152-249 33-144 (145)
167 3or5_A Thiol:disulfide interch 98.8 3.4E-09 1.2E-13 99.9 6.0 98 152-253 33-150 (165)
168 2r2j_A Thioredoxin domain-cont 98.8 6.7E-08 2.3E-12 105.0 16.7 200 138-366 120-330 (382)
169 3ph9_A Anterior gradient prote 98.8 3.6E-09 1.2E-13 100.6 4.7 96 145-252 32-143 (151)
170 3hcz_A Possible thiol-disulfid 98.8 1.3E-08 4.5E-13 93.7 7.8 91 152-252 30-144 (148)
171 2lja_A Putative thiol-disulfid 98.7 1.9E-08 6.4E-13 93.5 8.4 92 152-253 29-142 (152)
172 2f9s_A Thiol-disulfide oxidore 98.7 8.1E-09 2.8E-13 96.2 5.8 91 152-252 25-136 (151)
173 2l5o_A Putative thioredoxin; s 98.7 2E-08 6.9E-13 93.4 7.7 93 152-254 27-141 (153)
174 4evm_A Thioredoxin family prot 98.7 9.7E-09 3.3E-13 92.6 5.2 90 152-251 21-136 (138)
175 3fkf_A Thiol-disulfide oxidore 98.7 2.3E-08 7.7E-13 92.1 7.4 88 152-252 32-144 (148)
176 2fgx_A Putative thioredoxin; N 98.7 8.9E-09 3E-13 92.2 4.5 78 154-249 29-106 (107)
177 3ira_A Conserved protein; meth 98.7 1.5E-09 5E-14 105.6 -0.7 75 144-227 30-116 (173)
178 3gl3_A Putative thiol:disulfid 98.7 2.1E-08 7.3E-13 93.1 6.7 91 152-252 27-140 (152)
179 3ia1_A THIO-disulfide isomeras 98.6 2.7E-08 9.1E-13 92.8 6.1 87 154-252 31-142 (154)
180 3lwa_A Secreted thiol-disulfid 98.6 4.5E-08 1.5E-12 94.5 7.2 98 152-253 58-180 (183)
181 2b1k_A Thiol:disulfide interch 98.6 2.4E-08 8.3E-13 94.8 4.6 89 151-252 49-158 (168)
182 3lor_A Thiol-disulfide isomera 98.6 3.8E-08 1.3E-12 92.3 5.8 92 152-253 29-154 (160)
183 1kng_A Thiol:disulfide interch 98.6 2.4E-08 8.3E-13 93.1 3.6 89 152-252 41-150 (156)
184 3ed3_A Protein disulfide-isome 98.5 2E-06 7E-11 90.4 18.3 158 261-468 21-198 (298)
185 3ha9_A Uncharacterized thiored 98.5 1E-07 3.6E-12 90.1 7.3 88 152-252 36-162 (165)
186 3eyt_A Uncharacterized protein 98.5 7.3E-08 2.5E-12 90.2 6.0 92 152-253 27-151 (158)
187 2lrn_A Thiol:disulfide interch 98.5 8E-08 2.8E-12 89.7 6.1 88 152-252 28-139 (152)
188 1z6n_A Hypothetical protein PA 98.5 3.2E-08 1.1E-12 95.6 3.2 70 152-228 53-122 (167)
189 1i5g_A Tryparedoxin II; electr 98.5 7.2E-08 2.5E-12 89.1 5.0 70 152-227 27-121 (144)
190 3ewl_A Uncharacterized conserv 98.5 1E-07 3.4E-12 87.6 5.8 94 152-252 26-139 (142)
191 1ttz_A Conserved hypothetical 98.5 2.4E-08 8.3E-13 85.9 1.5 73 157-252 3-75 (87)
192 1o8x_A Tryparedoxin, TRYX, TXN 98.5 8.6E-08 3E-12 88.9 4.7 70 152-227 27-121 (146)
193 3eur_A Uncharacterized protein 98.4 1.3E-07 4.6E-12 87.1 5.1 93 152-250 30-141 (142)
194 1o73_A Tryparedoxin; electron 98.4 9.9E-08 3.4E-12 87.9 4.1 70 152-227 27-121 (144)
195 3kcm_A Thioredoxin family prot 98.4 1.4E-07 4.9E-12 87.7 5.2 91 152-252 27-141 (154)
196 3hdc_A Thioredoxin family prot 98.4 2.1E-07 7.3E-12 87.5 5.3 91 152-252 40-150 (158)
197 2y4t_A DNAJ homolog subfamily 98.4 2.1E-07 7.3E-12 100.3 5.3 62 37-98 382-449 (450)
198 2lrt_A Uncharacterized protein 98.3 2.9E-07 9.9E-12 86.4 4.8 88 152-249 34-143 (152)
199 3s9f_A Tryparedoxin; thioredox 98.3 2.8E-07 9.6E-12 88.0 4.4 68 152-225 47-137 (165)
200 3bj5_A Protein disulfide-isome 98.3 4.5E-06 1.5E-10 78.7 12.5 133 360-578 8-145 (147)
201 2cvb_A Probable thiol-disulfid 98.3 5E-07 1.7E-11 87.5 6.1 97 152-254 32-159 (188)
202 2ywi_A Hypothetical conserved 98.3 4.3E-07 1.5E-11 88.3 5.6 93 152-254 44-174 (196)
203 2hyx_A Protein DIPZ; thioredox 98.3 4.7E-07 1.6E-11 97.6 6.2 92 152-253 81-198 (352)
204 2guz_B Mitochondrial import in 98.3 4.2E-07 1.4E-11 73.7 4.4 51 38-89 5-58 (65)
205 1jfu_A Thiol:disulfide interch 98.3 6.1E-07 2.1E-11 86.6 6.1 98 152-253 59-179 (186)
206 2l4c_A Endoplasmic reticulum r 98.3 3.3E-06 1.1E-10 77.4 10.5 101 255-365 17-124 (124)
207 2lus_A Thioredoxion; CR-Trp16, 97.6 1.2E-07 4.1E-12 87.0 0.0 69 153-227 25-120 (143)
208 2e7p_A Glutaredoxin; thioredox 98.2 5.7E-08 1.9E-12 86.7 -2.3 87 148-252 15-106 (116)
209 3fw2_A Thiol-disulfide oxidore 98.2 1.9E-06 6.4E-11 80.1 7.7 88 152-252 32-146 (150)
210 3kh7_A Thiol:disulfide interch 98.2 6.4E-07 2.2E-11 86.3 4.6 89 152-253 57-166 (176)
211 2dlx_A UBX domain-containing p 98.2 1.5E-06 5.2E-11 82.6 7.0 99 144-253 29-135 (153)
212 2k8s_A Thioredoxin; dimer, str 98.2 1.8E-07 6.1E-12 78.3 0.2 60 157-226 4-63 (80)
213 2k6v_A Putative cytochrome C o 98.2 4.7E-07 1.6E-11 85.7 2.5 97 152-252 34-171 (172)
214 3cmi_A Peroxiredoxin HYR1; thi 98.2 1.9E-06 6.3E-11 82.3 6.6 96 152-252 31-166 (171)
215 1hyu_A AHPF, alkyl hydroperoxi 98.1 8E-07 2.7E-11 100.6 3.9 95 139-251 102-197 (521)
216 2vup_A Glutathione peroxidase- 98.1 4.3E-06 1.5E-10 81.4 8.2 98 152-253 47-184 (190)
217 2ggt_A SCO1 protein homolog, m 98.1 4.6E-06 1.6E-10 78.2 7.8 92 152-253 22-160 (164)
218 2ls5_A Uncharacterized protein 97.4 3.8E-07 1.3E-11 85.6 0.0 95 152-251 32-145 (159)
219 2p5q_A Glutathione peroxidase 98.1 4E-06 1.4E-10 79.1 7.0 97 152-252 31-166 (170)
220 2p31_A CL683, glutathione pero 98.1 4E-06 1.4E-10 80.9 6.9 97 152-252 48-179 (181)
221 1ego_A Glutaredoxin; electron 98.1 2.4E-06 8.3E-11 71.5 4.6 79 157-252 3-82 (85)
222 1wjk_A C330018D20RIK protein; 98.1 1E-06 3.5E-11 77.4 1.8 79 152-252 14-94 (100)
223 2rli_A SCO2 protein homolog, m 98.0 8.7E-06 3E-10 76.9 8.1 92 152-253 25-163 (171)
224 3dwv_A Glutathione peroxidase- 98.0 1.1E-05 3.8E-10 78.3 8.9 97 152-252 45-181 (187)
225 3u5r_E Uncharacterized protein 98.0 7E-06 2.4E-10 81.9 6.5 90 153-254 58-187 (218)
226 1eej_A Thiol:disulfide interch 98.0 4.4E-06 1.5E-10 83.5 4.8 84 152-252 85-209 (216)
227 2v1m_A Glutathione peroxidase; 98.0 9.5E-06 3.2E-10 76.4 6.8 97 152-252 30-165 (169)
228 4fo5_A Thioredoxin-like protei 98.0 2.7E-06 9.2E-11 78.3 2.7 69 152-226 31-124 (143)
229 2obi_A PHGPX, GPX-4, phospholi 97.9 8.3E-06 2.8E-10 78.7 5.2 96 152-251 46-181 (183)
230 3gyk_A 27KDA outer membrane pr 97.9 1E-05 3.5E-10 77.3 5.4 33 152-184 21-53 (175)
231 1we0_A Alkyl hydroperoxide red 97.9 1.8E-05 6.2E-10 76.5 6.7 91 152-252 30-155 (187)
232 1zof_A Alkyl hydroperoxide-red 97.8 2.1E-05 7.1E-10 76.9 6.9 91 152-252 32-159 (198)
233 3zzx_A Thioredoxin; oxidoreduc 97.8 3.5E-05 1.2E-09 68.0 7.4 97 262-364 5-105 (105)
234 2f8a_A Glutathione peroxidase 97.8 2.8E-05 9.5E-10 77.3 7.5 43 152-194 46-89 (208)
235 1t3b_A Thiol:disulfide interch 97.8 1.3E-05 4.4E-10 79.9 4.8 83 152-251 85-208 (211)
236 2bmx_A Alkyl hydroperoxidase C 97.8 1.9E-05 6.4E-10 77.1 5.8 97 152-252 44-168 (195)
237 3h79_A Thioredoxin-like protei 97.8 5.9E-05 2E-09 68.0 8.7 97 262-363 20-126 (127)
238 3kij_A Probable glutathione pe 97.8 3.1E-05 1.1E-09 74.5 6.9 97 152-252 37-168 (180)
239 3drn_A Peroxiredoxin, bacterio 97.7 2.1E-05 7.1E-10 74.2 5.1 90 152-251 27-146 (161)
240 1xzo_A BSSCO, hypothetical pro 97.7 0.00011 3.9E-09 69.3 9.8 97 152-252 32-170 (174)
241 2qc7_A ERP31, ERP28, endoplasm 97.7 0.00015 5.2E-09 73.8 11.2 100 261-364 9-118 (240)
242 1xvw_A Hypothetical protein RV 97.7 2E-05 7E-10 73.7 4.4 89 153-251 35-157 (160)
243 2gs3_A PHGPX, GPX-4, phospholi 97.7 3.4E-05 1.2E-09 74.6 6.0 57 152-208 48-113 (185)
244 2qsi_A Putative hydrogenase ex 97.7 0.00015 5E-09 67.5 9.9 98 261-364 19-122 (137)
245 2l4c_A Endoplasmic reticulum r 97.7 2.5E-05 8.6E-10 71.5 4.7 95 138-252 23-122 (124)
246 1un2_A DSBA, thiol-disulfide i 97.6 4.7E-06 1.6E-10 82.4 -1.1 45 152-196 112-159 (197)
247 1qmv_A Human thioredoxin perox 97.6 2.8E-05 9.5E-10 76.0 4.4 91 152-252 33-161 (197)
248 2dml_A Protein disulfide-isome 97.6 0.00037 1.3E-08 62.6 11.6 85 278-364 35-123 (130)
249 2qgv_A Hydrogenase-1 operon pr 97.6 7.8E-05 2.7E-09 69.6 7.0 97 261-364 21-124 (140)
250 2h01_A 2-Cys peroxiredoxin; th 97.6 4.7E-05 1.6E-09 74.0 5.3 91 152-252 30-157 (192)
251 2es7_A Q8ZP25_salty, putative 97.6 0.00015 5.3E-09 67.6 8.6 99 260-366 20-126 (142)
252 2djk_A PDI, protein disulfide- 97.6 0.00014 4.8E-09 66.6 8.3 104 256-366 5-116 (133)
253 2c0g_A ERP29 homolog, windbeut 97.6 0.00035 1.2E-08 71.5 11.7 98 262-364 21-131 (248)
254 3ga4_A Dolichyl-diphosphooligo 97.6 0.00023 8E-09 69.1 9.5 100 262-365 23-153 (178)
255 1zye_A Thioredoxin-dependent p 97.5 6.4E-05 2.2E-09 75.2 5.5 91 152-252 55-183 (220)
256 1h75_A Glutaredoxin-like prote 97.5 2.1E-05 7.2E-10 65.2 1.3 71 157-249 3-73 (81)
257 3hd5_A Thiol:disulfide interch 97.5 8E-05 2.7E-09 72.5 5.1 43 151-193 23-65 (195)
258 2voc_A Thioredoxin; electron t 97.5 0.00032 1.1E-08 61.6 8.5 97 262-366 6-106 (112)
259 1uul_A Tryparedoxin peroxidase 97.5 5.9E-05 2E-09 74.0 4.0 97 152-252 35-163 (202)
260 1r7h_A NRDH-redoxin; thioredox 97.5 9.7E-05 3.3E-09 59.9 4.5 71 157-249 3-73 (75)
261 3h93_A Thiol:disulfide interch 97.5 6.9E-05 2.4E-09 72.8 4.2 35 152-186 24-58 (192)
262 3tco_A Thioredoxin (TRXA-1); d 97.4 0.00039 1.3E-08 59.9 7.9 96 261-363 8-107 (109)
263 3hxs_A Thioredoxin, TRXP; elec 97.4 0.00061 2.1E-08 62.2 9.4 83 278-363 51-137 (141)
264 2b7k_A SCO1 protein; metalloch 97.4 0.0003 1E-08 68.9 7.6 100 152-255 40-180 (200)
265 2znm_A Thiol:disulfide interch 97.3 0.00079 2.7E-08 65.2 10.0 33 152-184 21-53 (195)
266 3q6o_A Sulfhydryl oxidase 1; p 97.3 0.0055 1.9E-07 61.6 16.7 99 262-364 17-126 (244)
267 3die_A Thioredoxin, TRX; elect 97.3 0.00048 1.6E-08 59.1 7.5 94 262-363 8-105 (106)
268 2dj1_A Protein disulfide-isome 97.3 0.00064 2.2E-08 61.8 8.6 97 262-366 22-125 (140)
269 1mek_A Protein disulfide isome 97.3 0.0015 5.2E-08 57.0 10.3 97 262-364 12-116 (120)
270 3qfa_C Thioredoxin; protein-pr 97.2 0.00066 2.3E-08 60.2 7.8 93 265-363 19-115 (116)
271 3gkn_A Bacterioferritin comigr 97.2 0.00034 1.2E-08 65.5 5.7 98 152-252 34-160 (163)
272 3apq_A DNAJ homolog subfamily 97.2 0.00085 2.9E-08 66.1 8.8 73 291-366 131-203 (210)
273 3ztl_A Thioredoxin peroxidase; 97.2 0.00022 7.6E-09 71.2 4.6 97 152-252 68-196 (222)
274 3qou_A Protein YBBN; thioredox 97.2 0.002 6.8E-08 66.2 11.9 101 259-364 9-113 (287)
275 1x5d_A Protein disulfide-isome 97.2 0.00074 2.5E-08 60.6 7.6 97 262-364 12-116 (133)
276 3gnj_A Thioredoxin domain prot 97.2 0.00065 2.2E-08 58.9 6.8 96 262-363 9-108 (111)
277 3t58_A Sulfhydryl oxidase 1; o 97.2 0.0089 3E-07 67.5 17.8 100 262-364 17-126 (519)
278 2l5l_A Thioredoxin; structural 97.2 0.00091 3.1E-08 61.0 8.0 86 278-366 38-127 (136)
279 1nm3_A Protein HI0572; hybrid, 97.2 0.0021 7.2E-08 64.6 11.4 56 152-207 32-91 (241)
280 1x5e_A Thioredoxin domain cont 97.2 0.00098 3.4E-08 59.6 8.0 96 262-366 12-111 (126)
281 1v58_A Thiol:disulfide interch 97.1 0.00023 8E-09 72.2 4.2 88 152-252 96-231 (241)
282 3m9j_A Thioredoxin; oxidoreduc 97.1 0.0018 6.1E-08 55.4 9.3 96 262-363 5-104 (105)
283 1kte_A Thioltransferase; redox 97.1 7.9E-05 2.7E-09 65.0 0.5 67 147-226 6-76 (105)
284 2yzu_A Thioredoxin; redox prot 97.1 0.001 3.5E-08 57.1 7.5 95 262-363 6-104 (109)
285 1thx_A Thioredoxin, thioredoxi 97.1 0.0015 5.2E-08 56.7 8.6 83 278-363 25-111 (115)
286 1oaz_A Thioredoxin 1; immune s 97.1 0.00089 3.1E-08 60.3 7.3 73 288-363 49-121 (123)
287 2i4a_A Thioredoxin; acidophIle 97.1 0.0008 2.8E-08 57.7 6.7 83 278-363 20-106 (107)
288 3uvt_A Thioredoxin domain-cont 97.1 0.00093 3.2E-08 57.8 7.0 94 262-363 10-110 (111)
289 3p2a_A Thioredoxin 2, putative 97.1 0.0011 3.8E-08 61.1 7.9 91 268-364 48-142 (148)
290 4euy_A Uncharacterized protein 97.1 0.00042 1.5E-08 60.0 4.7 82 278-363 18-103 (105)
291 1w4v_A Thioredoxin, mitochondr 97.1 0.0008 2.7E-08 59.8 6.5 83 278-363 31-117 (119)
292 2i81_A 2-Cys peroxiredoxin; st 97.1 0.00029 1E-08 70.0 3.9 91 152-252 51-178 (213)
293 2e0q_A Thioredoxin; electron t 97.1 0.0013 4.5E-08 55.7 7.5 89 268-363 9-101 (104)
294 2klx_A Glutaredoxin; thioredox 97.0 0.00068 2.3E-08 57.3 5.5 56 156-226 7-63 (89)
295 3ul3_B Thioredoxin, thioredoxi 97.0 0.0006 2.1E-08 61.4 5.5 84 277-363 41-128 (128)
296 2trx_A Thioredoxin; electron t 97.0 0.001 3.6E-08 57.3 6.8 83 278-363 20-106 (108)
297 3aps_A DNAJ homolog subfamily 97.0 0.00054 1.8E-08 60.8 5.1 84 278-364 21-112 (122)
298 1xwb_A Thioredoxin; dimerizati 97.0 0.0028 9.5E-08 54.2 9.4 97 262-363 5-105 (106)
299 1nsw_A Thioredoxin, TRX; therm 97.0 0.0008 2.7E-08 57.8 5.8 82 278-362 17-102 (105)
300 1dby_A Chloroplast thioredoxin 97.0 0.0016 5.4E-08 56.0 7.4 83 278-363 19-105 (107)
301 1xvq_A Thiol peroxidase; thior 97.0 0.0011 3.8E-08 63.3 7.0 41 152-194 43-84 (175)
302 2i3y_A Epididymal secretory gl 96.9 0.0031 1.1E-07 62.9 10.2 42 152-194 55-97 (215)
303 2a4v_A Peroxiredoxin DOT5; yea 96.9 0.00059 2E-08 63.8 4.7 42 154-195 36-78 (159)
304 2vim_A Thioredoxin, TRX; thior 96.9 0.0052 1.8E-07 52.2 10.2 96 262-363 4-103 (104)
305 2j23_A Thioredoxin; immune pro 96.9 0.0016 5.4E-08 58.1 7.1 97 260-363 18-119 (121)
306 2l57_A Uncharacterized protein 96.9 0.0016 5.5E-08 58.2 7.0 89 278-366 26-118 (126)
307 3hz4_A Thioredoxin; NYSGXRC, P 96.9 0.00085 2.9E-08 61.6 5.3 84 278-364 24-111 (140)
308 1gh2_A Thioredoxin-like protei 96.9 0.0025 8.7E-08 55.0 8.1 96 262-363 6-105 (107)
309 2o8v_B Thioredoxin 1; disulfid 96.9 0.0012 4.2E-08 59.7 6.2 83 278-363 40-126 (128)
310 1ep7_A Thioredoxin CH1, H-type 96.9 0.0015 5E-08 56.8 6.4 98 262-363 7-109 (112)
311 1fb6_A Thioredoxin M; electron 96.9 0.0021 7E-08 54.9 7.2 83 278-363 18-104 (105)
312 2oe3_A Thioredoxin-3; electron 96.9 0.0017 5.9E-08 57.4 6.8 93 262-362 17-113 (114)
313 2jsy_A Probable thiol peroxida 96.9 0.00057 2E-08 64.3 3.9 55 152-207 43-98 (167)
314 1syr_A Thioredoxin; SGPP, stru 96.8 0.0024 8.4E-08 55.8 7.5 90 266-363 17-110 (112)
315 2ppt_A Thioredoxin-2; thiredox 96.8 0.0016 5.5E-08 61.2 6.6 83 278-363 64-150 (155)
316 2i1u_A Thioredoxin, TRX, MPT46 96.8 0.0013 4.4E-08 58.0 5.6 83 278-363 30-116 (121)
317 1t00_A Thioredoxin, TRX; redox 96.8 0.0018 6.1E-08 56.3 6.3 83 278-363 23-109 (112)
318 2av4_A Thioredoxin-like protei 96.8 0.0012 4E-08 62.8 5.4 100 262-364 26-138 (160)
319 2c0d_A Thioredoxin peroxidase 96.8 0.0011 3.6E-08 66.5 5.4 98 152-252 55-182 (221)
320 3d6i_A Monothiol glutaredoxin- 96.8 0.0041 1.4E-07 54.0 8.6 98 262-363 5-107 (112)
321 3f3q_A Thioredoxin-1; His TAG, 96.7 0.0028 9.5E-08 55.3 7.0 88 268-363 17-108 (109)
322 2dj0_A Thioredoxin-related tra 96.7 0.0018 6.1E-08 59.0 5.9 96 262-362 12-118 (137)
323 1fo5_A Thioredoxin; disulfide 96.7 0.0056 1.9E-07 50.1 8.3 77 280-363 4-84 (85)
324 2hze_A Glutaredoxin-1; thiored 96.7 0.00038 1.3E-08 62.0 0.8 60 156-226 20-83 (114)
325 1v98_A Thioredoxin; oxidoreduc 96.7 0.0044 1.5E-07 56.5 8.1 82 279-363 52-136 (140)
326 2l6c_A Thioredoxin; oxidoreduc 96.6 0.004 1.4E-07 54.4 7.4 83 278-364 19-105 (110)
327 2cq9_A GLRX2 protein, glutared 96.6 0.00082 2.8E-08 61.5 2.9 65 146-226 20-88 (130)
328 4g2e_A Peroxiredoxin; redox pr 96.6 0.0018 6E-08 60.9 5.2 56 152-207 29-86 (157)
329 2vlu_A Thioredoxin, thioredoxi 96.6 0.0029 9.8E-08 56.0 6.3 91 268-363 23-118 (122)
330 2r37_A Glutathione peroxidase 96.6 0.0081 2.8E-07 59.4 10.1 42 152-194 37-79 (207)
331 1r26_A Thioredoxin; redox-acti 96.6 0.0041 1.4E-07 56.1 7.2 94 262-363 24-121 (125)
332 2djj_A PDI, protein disulfide- 96.6 0.0043 1.5E-07 54.6 7.0 82 278-364 25-116 (121)
333 2dj3_A Protein disulfide-isome 96.6 0.0031 1.1E-07 56.7 6.2 86 278-365 25-118 (133)
334 1nho_A Probable thioredoxin; b 96.5 0.0082 2.8E-07 49.1 8.3 69 288-363 15-83 (85)
335 2xc2_A Thioredoxinn; oxidoredu 96.5 0.0046 1.6E-07 54.3 7.1 95 262-363 18-116 (117)
336 2wz9_A Glutaredoxin-3; protein 96.5 0.006 2.1E-07 56.7 8.1 97 262-364 17-117 (153)
337 1z6m_A Conserved hypothetical 96.5 0.0031 1.1E-07 59.9 5.9 35 152-186 26-62 (175)
338 2pn8_A Peroxiredoxin-4; thiore 96.5 0.0032 1.1E-07 62.3 6.1 98 152-252 47-175 (211)
339 3ixr_A Bacterioferritin comigr 96.4 0.0032 1.1E-07 60.3 5.8 54 152-205 50-105 (179)
340 2ht9_A Glutaredoxin-2; thiored 96.4 0.0013 4.3E-08 61.7 2.5 65 146-226 42-110 (146)
341 3dxb_A Thioredoxin N-terminall 96.3 0.0048 1.6E-07 61.3 6.6 84 278-364 30-117 (222)
342 1xfl_A Thioredoxin H1; AT3G510 96.3 0.0066 2.3E-07 54.4 6.9 97 262-363 21-122 (124)
343 2yan_A Glutaredoxin-3; oxidore 96.3 0.0014 4.8E-08 57.4 2.1 65 146-226 10-80 (105)
344 2rem_A Disulfide oxidoreductas 96.3 0.0038 1.3E-07 60.1 5.4 35 152-186 24-58 (193)
345 1ti3_A Thioredoxin H, PTTRXH1; 96.3 0.006 2E-07 52.8 6.2 97 262-363 9-110 (113)
346 1n8j_A AHPC, alkyl hydroperoxi 96.3 0.0045 1.6E-07 59.7 5.9 98 152-252 29-154 (186)
347 3ic4_A Glutaredoxin (GRX-1); s 96.3 0.002 6.7E-08 54.6 2.8 73 156-250 13-91 (92)
348 3c1r_A Glutaredoxin-1; oxidize 96.2 0.00096 3.3E-08 60.0 0.8 68 146-226 18-90 (118)
349 1fov_A Glutaredoxin 3, GRX3; a 96.2 0.0019 6.6E-08 53.0 2.4 71 157-251 3-74 (82)
350 3bj5_A Protein disulfide-isome 96.1 0.011 3.9E-07 55.1 7.7 110 137-254 15-127 (147)
351 1q98_A Thiol peroxidase, TPX; 96.1 0.004 1.4E-07 58.6 4.6 55 152-207 42-97 (165)
352 2fwh_A Thiol:disulfide interch 96.1 0.029 9.9E-07 50.7 10.3 105 257-363 11-126 (134)
353 3qpm_A Peroxiredoxin; oxidored 96.1 0.0046 1.6E-07 62.6 5.1 99 152-252 76-204 (240)
354 2vm1_A Thioredoxin, thioredoxi 96.1 0.007 2.4E-07 52.8 5.6 97 262-363 11-112 (118)
355 2pu9_C TRX-F, thioredoxin F-ty 96.0 0.018 6.2E-07 49.8 8.1 96 262-363 10-109 (111)
356 1tp9_A Peroxiredoxin, PRX D (t 96.0 0.0052 1.8E-07 57.8 4.9 56 152-207 34-93 (162)
357 2kuc_A Putative disulphide-iso 96.0 0.0076 2.6E-07 53.8 5.7 68 299-366 55-122 (130)
358 1wmj_A Thioredoxin H-type; str 96.0 0.0075 2.6E-07 53.6 5.6 98 262-364 19-121 (130)
359 1wou_A Thioredoxin -related pr 96.0 0.012 4.3E-07 52.4 7.0 92 268-362 15-122 (123)
360 3gix_A Thioredoxin-like protei 96.0 0.0095 3.3E-07 55.5 6.4 93 268-363 14-119 (149)
361 3tjj_A Peroxiredoxin-4; thiore 96.0 0.0069 2.4E-07 61.9 5.9 98 152-252 90-218 (254)
362 2trc_P Phosducin, MEKA, PP33; 96.0 0.0074 2.5E-07 60.2 5.9 99 262-365 104-213 (217)
363 3me7_A Putative uncharacterize 96.0 0.014 4.9E-07 55.3 7.6 98 152-252 27-160 (170)
364 1zma_A Bacterocin transport ac 96.0 0.0065 2.2E-07 53.5 4.8 88 268-361 22-117 (118)
365 3emx_A Thioredoxin; structural 95.9 0.0069 2.3E-07 55.1 5.0 91 268-365 26-126 (135)
366 2dbc_A PDCL2, unnamed protein 95.9 0.015 5E-07 53.0 7.2 92 268-366 20-122 (135)
367 3hz8_A Thiol:disulfide interch 95.9 0.0017 5.7E-08 63.4 0.8 43 152-194 23-65 (193)
368 3iv4_A Putative oxidoreductase 95.9 0.0099 3.4E-07 53.2 5.6 94 262-360 11-111 (112)
369 2khp_A Glutaredoxin; thioredox 95.9 0.0028 9.6E-08 53.6 1.9 57 156-226 7-64 (92)
370 3evi_A Phosducin-like protein 95.8 0.011 3.9E-07 53.1 6.0 80 279-365 24-114 (118)
371 3cxg_A Putative thioredoxin; m 95.8 0.01 3.5E-07 53.9 5.7 96 262-363 25-127 (133)
372 1faa_A Thioredoxin F; electron 95.8 0.023 8E-07 50.2 7.9 96 262-363 23-122 (124)
373 3gv1_A Disulfide interchange p 95.8 0.0041 1.4E-07 58.3 2.9 87 151-252 12-137 (147)
374 4gqc_A Thiol peroxidase, perox 95.8 0.003 1E-07 59.9 1.9 57 151-207 31-89 (164)
375 2yj7_A LPBCA thioredoxin; oxid 94.7 0.0016 5.6E-08 55.3 0.0 82 278-362 19-104 (106)
376 1qgv_A Spliceosomal protein U5 95.7 0.011 3.6E-07 54.6 5.4 84 278-363 23-119 (142)
377 3d22_A TRXH4, thioredoxin H-ty 95.7 0.0089 3.1E-07 54.1 4.8 98 262-364 29-131 (139)
378 2pwj_A Mitochondrial peroxired 95.7 0.0059 2E-07 58.3 3.6 55 153-207 44-101 (171)
379 3nzn_A Glutaredoxin; structura 95.7 0.0089 3E-07 52.0 4.5 75 154-249 21-101 (103)
380 2yzh_A Probable thiol peroxida 95.6 0.0041 1.4E-07 58.8 2.3 55 152-207 46-101 (171)
381 3l9v_A Putative thiol-disulfid 95.6 0.0017 5.7E-08 63.2 -0.5 42 153-194 14-58 (189)
382 2f51_A Thioredoxin; electron t 95.6 0.014 4.8E-07 51.7 5.5 85 278-366 23-114 (118)
383 3feu_A Putative lipoprotein; a 95.4 0.0044 1.5E-07 60.1 1.8 40 153-194 22-61 (185)
384 3a2v_A Probable peroxiredoxin; 95.4 0.008 2.7E-07 61.4 3.7 88 155-252 36-160 (249)
385 1psq_A Probable thiol peroxida 95.4 0.0045 1.5E-07 58.1 1.7 55 152-207 41-96 (163)
386 3zrd_A Thiol peroxidase; oxido 95.4 0.0095 3.3E-07 58.3 4.1 55 152-207 77-132 (200)
387 2wfc_A Peroxiredoxin 5, PRDX5; 95.4 0.0092 3.1E-07 56.8 3.8 56 152-207 30-89 (167)
388 3fk8_A Disulphide isomerase; A 95.3 0.014 4.9E-07 52.3 4.7 85 278-362 29-130 (133)
389 1a0r_P Phosducin, MEKA, PP33; 95.3 0.027 9.1E-07 57.3 7.2 100 262-366 117-227 (245)
390 3uma_A Hypothetical peroxiredo 95.2 0.011 3.6E-07 57.4 3.5 55 153-207 56-114 (184)
391 3rhb_A ATGRXC5, glutaredoxin-C 95.1 0.0086 3E-07 52.8 2.4 56 157-226 21-81 (113)
392 2lqo_A Putative glutaredoxin R 95.1 0.03 1E-06 48.1 5.7 78 156-252 5-82 (92)
393 3qmx_A Glutaredoxin A, glutare 95.1 0.013 4.4E-07 51.0 3.4 61 152-226 13-75 (99)
394 2lst_A Thioredoxin; structural 93.9 0.0045 1.5E-07 55.4 0.0 86 278-363 19-114 (130)
395 3mng_A Peroxiredoxin-5, mitoch 94.9 0.02 6.7E-07 55.0 4.5 55 153-207 43-101 (173)
396 1wik_A Thioredoxin-like protei 94.9 0.012 4.1E-07 51.8 2.8 67 144-226 6-78 (109)
397 1zzo_A RV1677; thioredoxin fol 94.6 0.059 2E-06 47.5 6.7 69 293-363 44-133 (136)
398 3erw_A Sporulation thiol-disul 94.6 0.038 1.3E-06 49.5 5.5 83 278-360 34-144 (145)
399 3p7x_A Probable thiol peroxida 94.6 0.011 3.7E-07 55.6 1.8 54 152-207 45-99 (166)
400 2b5x_A YKUV protein, TRXY; thi 94.6 0.061 2.1E-06 48.3 6.8 71 293-363 48-143 (148)
401 2ec4_A FAS-associated factor 1 94.5 0.072 2.5E-06 51.5 7.5 96 151-252 53-166 (178)
402 3qcp_A QSOX from trypanosoma b 94.5 0.012 4.1E-07 65.4 2.1 89 262-354 28-129 (470)
403 1lu4_A Soluble secreted antige 94.5 0.069 2.4E-06 47.3 6.8 69 293-363 43-134 (136)
404 1hyu_A AHPF, alkyl hydroperoxi 94.2 0.29 9.7E-06 54.9 12.6 174 154-363 19-198 (521)
405 2lja_A Putative thiol-disulfid 94.0 0.2 6.8E-06 45.4 9.0 87 278-364 30-142 (152)
406 3msz_A Glutaredoxin 1; alpha-b 93.9 0.022 7.4E-07 47.3 2.0 80 156-252 5-85 (89)
407 1ilo_A Conserved hypothetical 93.9 0.11 3.7E-06 41.5 6.2 70 281-360 3-76 (77)
408 3dml_A Putative uncharacterize 93.8 0.075 2.6E-06 47.7 5.6 64 299-363 40-108 (116)
409 2l5o_A Putative thioredoxin; s 93.2 0.27 9.1E-06 44.5 8.3 44 320-363 96-139 (153)
410 2f9s_A Thiol-disulfide oxidore 93.2 0.13 4.6E-06 46.6 6.3 86 278-363 26-136 (151)
411 2v2g_A Peroxiredoxin 6; oxidor 93.0 0.1 3.4E-06 52.5 5.6 42 154-195 30-73 (233)
412 3ctg_A Glutaredoxin-2; reduced 92.8 0.016 5.6E-07 52.9 -0.6 69 145-226 29-102 (129)
413 4evm_A Thioredoxin family prot 92.7 0.25 8.5E-06 43.2 7.2 43 320-362 94-136 (138)
414 3raz_A Thioredoxin-related pro 92.3 0.27 9.4E-06 44.7 7.2 45 320-364 93-139 (151)
415 3fkf_A Thiol-disulfide oxidore 92.2 0.47 1.6E-05 42.3 8.6 82 278-362 33-143 (148)
416 3hcz_A Possible thiol-disulfid 91.9 0.65 2.2E-05 41.4 9.1 79 278-361 31-139 (148)
417 3l9s_A Thiol:disulfide interch 91.7 0.039 1.3E-06 53.6 0.6 42 153-194 21-65 (191)
418 2ju5_A Thioredoxin disulfide i 91.1 0.35 1.2E-05 44.6 6.6 64 299-363 76-150 (154)
419 3h8q_A Thioredoxin reductase 3 91.1 0.086 3E-06 46.6 2.2 65 146-226 10-78 (114)
420 3or5_A Thiol:disulfide interch 91.0 0.41 1.4E-05 43.8 6.9 84 278-363 34-149 (165)
421 3ia1_A THIO-disulfide isomeras 90.8 0.27 9.4E-06 44.6 5.4 48 319-366 98-145 (154)
422 3gl3_A Putative thiol:disulfid 90.5 0.59 2E-05 42.1 7.4 74 293-366 47-143 (152)
423 4hde_A SCO1/SENC family lipopr 90.3 0.87 3E-05 42.8 8.6 43 152-194 31-77 (170)
424 3lor_A Thiol-disulfide isomera 90.0 0.55 1.9E-05 42.7 6.8 42 322-363 112-153 (160)
425 1prx_A HORF6; peroxiredoxin, h 88.8 0.3 1E-05 48.5 4.3 50 155-204 34-84 (224)
426 3eyt_A Uncharacterized protein 88.3 0.86 2.9E-05 41.4 6.8 43 321-363 108-150 (158)
427 2lrn_A Thiol:disulfide interch 88.3 1.2 4.1E-05 40.3 7.7 68 293-363 48-139 (152)
428 2h30_A Thioredoxin, peptide me 88.2 0.64 2.2E-05 42.5 5.8 44 320-363 111-154 (164)
429 4dvc_A Thiol:disulfide interch 88.1 0.15 5.1E-06 48.0 1.4 38 152-189 20-57 (184)
430 2fgx_A Putative thioredoxin; N 87.3 0.71 2.4E-05 40.6 5.2 61 292-360 46-106 (107)
431 3keb_A Probable thiol peroxida 87.2 0.41 1.4E-05 47.9 4.0 52 152-207 47-104 (224)
432 3hdc_A Thioredoxin family prot 87.0 1.1 3.9E-05 40.8 6.7 89 278-366 41-153 (158)
433 3ha9_A Uncharacterized thiored 86.6 1.5 5.2E-05 40.1 7.5 41 321-363 121-162 (165)
434 3l4n_A Monothiol glutaredoxin- 86.6 0.19 6.3E-06 45.8 1.0 66 145-222 6-76 (127)
435 3f9u_A Putative exported cytoc 86.2 0.43 1.5E-05 44.5 3.4 40 323-362 123-163 (172)
436 2dlx_A UBX domain-containing p 86.2 3.4 0.00012 38.5 9.6 57 305-362 76-133 (153)
437 1kng_A Thiol:disulfide interch 86.2 0.64 2.2E-05 42.0 4.5 44 320-363 107-150 (156)
438 3kcm_A Thioredoxin family prot 85.6 1.2 4.3E-05 40.0 6.2 70 293-362 47-140 (154)
439 3lwa_A Secreted thiol-disulfid 85.3 1.6 5.3E-05 40.9 6.9 85 278-363 59-179 (183)
440 3c7m_A Thiol:disulfide interch 84.6 0.34 1.2E-05 46.0 1.9 41 152-192 16-57 (195)
441 1xcc_A 1-Cys peroxiredoxin; un 84.5 0.41 1.4E-05 47.4 2.5 42 155-196 34-76 (220)
442 3fw2_A Thiol-disulfide oxidore 84.5 2.6 8.7E-05 37.9 7.7 67 293-362 54-145 (150)
443 3kp8_A Vkorc1/thioredoxin doma 83.7 0.44 1.5E-05 41.5 2.0 38 319-362 55-92 (106)
444 2wci_A Glutaredoxin-4; redox-a 82.8 0.47 1.6E-05 43.5 1.9 50 163-226 48-98 (135)
445 2axo_A Hypothetical protein AT 82.8 1.5 5E-05 45.1 5.8 82 155-252 44-141 (270)
446 1nm3_A Protein HI0572; hybrid, 82.3 0.67 2.3E-05 46.0 3.0 57 154-222 169-225 (241)
447 2b1k_A Thiol:disulfide interch 81.9 1.2 4E-05 41.1 4.4 43 320-362 115-157 (168)
448 2ct6_A SH3 domain-binding glut 81.5 1.1 3.7E-05 39.4 3.7 55 156-222 9-78 (111)
449 3s9f_A Tryparedoxin; thioredox 81.4 1.5 5.2E-05 40.7 5.0 63 278-340 48-138 (165)
450 1o8x_A Tryparedoxin, TRYX, TXN 80.5 1.8 6.1E-05 38.8 5.0 64 278-341 28-120 (146)
451 1o73_A Tryparedoxin; electron 80.0 1.7 5.9E-05 38.6 4.7 64 278-341 28-120 (144)
452 2cvb_A Probable thiol-disulfid 79.5 3 0.0001 39.1 6.5 70 292-363 51-157 (188)
453 1i5g_A Tryparedoxin II; electr 79.2 1.9 6.6E-05 38.4 4.7 64 278-341 28-120 (144)
454 4f82_A Thioredoxin reductase; 79.2 1.2 4.1E-05 42.7 3.5 55 153-207 48-105 (176)
455 1sen_A Thioredoxin-like protei 78.6 0.6 2.1E-05 43.7 1.1 85 278-363 46-146 (164)
456 1t1v_A SH3BGRL3, SH3 domain-bi 78.4 1.6 5.5E-05 36.6 3.7 56 157-222 4-66 (93)
457 1aba_A Glutaredoxin; electron 77.1 1.2 4.1E-05 36.8 2.4 57 157-226 2-73 (87)
458 3sbc_A Peroxiredoxin TSA1; alp 76.9 1.9 6.4E-05 42.8 4.2 54 152-205 51-106 (216)
459 2ywi_A Hypothetical conserved 76.8 2.5 8.5E-05 39.9 5.0 44 320-363 120-172 (196)
460 2hyx_A Protein DIPZ; thioredox 76.4 2.6 8.9E-05 44.8 5.5 44 320-363 154-197 (352)
461 3zyw_A Glutaredoxin-3; metal b 76.0 1.3 4.3E-05 39.0 2.4 54 157-222 18-77 (111)
462 2ggt_A SCO1 protein homolog, m 74.7 4.4 0.00015 36.7 5.9 42 321-362 102-158 (164)
463 3kh7_A Thiol:disulfide interch 74.0 9.7 0.00033 35.4 8.3 44 320-363 122-165 (176)
464 1ttz_A Conserved hypothetical 73.2 2.4 8.4E-05 35.5 3.4 47 309-363 29-75 (87)
465 2rli_A SCO2 protein homolog, m 72.8 7.6 0.00026 35.4 7.1 42 321-362 105-161 (171)
466 1z6n_A Hypothetical protein PA 72.2 2.4 8.1E-05 40.1 3.5 80 278-362 54-140 (167)
467 1jfu_A Thiol:disulfide interch 71.9 7.2 0.00025 36.3 6.8 71 293-363 79-178 (186)
468 3ipz_A Monothiol glutaredoxin- 71.3 1.9 6.6E-05 37.5 2.4 50 163-226 31-81 (109)
469 3ewl_A Uncharacterized conserv 71.3 4.6 0.00016 35.6 5.0 37 324-363 103-139 (142)
470 3gha_A Disulfide bond formatio 71.0 1.4 4.7E-05 42.9 1.5 42 152-193 28-72 (202)
471 1xiy_A Peroxiredoxin, pfaop; a 70.1 3.7 0.00012 39.4 4.3 55 153-207 43-102 (182)
472 1wjk_A C330018D20RIK protein; 70.0 17 0.00057 30.7 8.1 54 304-363 41-94 (100)
473 3tue_A Tryparedoxin peroxidase 69.7 3.7 0.00013 40.8 4.3 54 152-205 55-110 (219)
474 3gx8_A Monothiol glutaredoxin- 69.3 3.2 0.00011 37.0 3.4 51 163-226 29-82 (121)
475 2pzi_A Probable serine/threoni 68.8 4.6 0.00016 46.4 5.6 48 34-86 626-675 (681)
476 2lrt_A Uncharacterized protein 67.4 7.4 0.00025 35.2 5.6 33 322-354 105-137 (152)
477 2wem_A Glutaredoxin-related pr 67.1 2.4 8.3E-05 37.7 2.2 48 163-222 33-82 (118)
478 2xhf_A Peroxiredoxin 5; oxidor 67.1 8.3 0.00028 36.6 6.1 55 153-207 42-99 (171)
479 4eo3_A Bacterioferritin comigr 67.0 4.4 0.00015 42.4 4.5 97 152-252 23-137 (322)
480 3f4s_A Alpha-DSBA1, putative u 66.4 2.2 7.4E-05 42.4 1.9 41 152-192 38-81 (226)
481 3gn3_A Putative protein-disulf 65.2 1.8 6.1E-05 41.5 0.9 32 151-182 12-43 (182)
482 3eur_A Uncharacterized protein 59.2 12 0.0004 33.0 5.3 37 322-361 105-141 (142)
483 2k6v_A Putative cytochrome C o 55.6 9.7 0.00033 34.6 4.2 33 329-362 136-170 (172)
484 3cmi_A Peroxiredoxin HYR1; thi 54.0 31 0.001 31.5 7.4 38 325-362 122-165 (171)
485 3u5r_E Uncharacterized protein 53.8 26 0.00088 33.8 7.2 70 292-363 77-185 (218)
486 3gmf_A Protein-disulfide isome 53.7 4.1 0.00014 39.8 1.2 38 321-364 158-196 (205)
487 3ph9_A Anterior gradient prote 52.7 14 0.00048 34.1 4.8 54 308-362 79-139 (151)
488 1zof_A Alkyl hydroperoxide-red 52.0 20 0.00068 33.8 5.9 45 320-364 107-160 (198)
489 3bci_A Disulfide bond protein 52.0 5.2 0.00018 37.6 1.7 31 152-182 10-41 (186)
490 3kp9_A Vkorc1/thioredoxin doma 51.9 4.1 0.00014 42.2 0.9 70 282-361 202-276 (291)
491 4fo5_A Thioredoxin-like protei 50.8 11 0.00039 33.2 3.7 39 320-361 103-141 (143)
492 2bmx_A Alkyl hydroperoxidase C 49.0 30 0.001 32.4 6.7 44 320-363 116-168 (195)
493 1we0_A Alkyl hydroperoxide red 47.6 38 0.0013 31.4 7.0 45 320-364 102-156 (187)
494 2lus_A Thioredoxion; CR-Trp16, 53.0 4 0.00014 35.9 0.0 22 320-341 98-119 (143)
495 3tdg_A DSBG, putative uncharac 47.1 4.5 0.00015 41.5 0.4 27 152-178 146-172 (273)
496 2e7p_A Glutaredoxin; thioredox 46.0 20 0.00067 30.4 4.4 43 320-365 63-108 (116)
497 2in3_A Hypothetical protein; D 45.8 16 0.00054 34.9 4.1 42 202-253 168-209 (216)
498 3gyk_A 27KDA outer membrane pr 44.9 28 0.00096 31.9 5.6 38 320-363 134-171 (175)
499 2p5q_A Glutathione peroxidase 44.4 38 0.0013 30.3 6.4 34 329-362 129-165 (170)
500 3dwv_A Glutathione peroxidase- 43.6 1.1E+02 0.0037 28.3 9.6 34 329-362 144-180 (187)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=3.9e-46 Score=442.90 Aligned_cols=367 Identities=19% Similarity=0.311 Sum_probs=245.4
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhhcccCcCCchhhhhhhhhhc
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEKVR 112 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~---~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~~~~~~~~~ 112 (699)
..|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|.++..... +
T Consensus 20 ~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~---~ 96 (780)
T 3apo_A 20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ---G 96 (780)
T ss_dssp ---CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------------
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC---C
Confidence 679999999999999999999999999999999985 3577899999999999999999999999988765442 4
Q ss_pred cccCccccccccCCCCCCCCCCcceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeee
Q 005374 113 EQYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE 192 (699)
Q Consensus 113 ~~~~~~~f~~~~f~f~~~~d~~~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vd 192 (699)
+++..++|++..|++|.+. +.|..||.++|++.++++++|||+||||||+||+++.|.|+++|+.+++.+.+++||
T Consensus 97 ~~~~~~~~~~~~fg~~~~~----~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd 172 (780)
T 3apo_A 97 GQYESWSYYRYDFGIYDDD----PEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVN 172 (780)
T ss_dssp -------CCSSSSSTTTTC----TTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEE
T ss_pred CCcccccccchhhcccCCC----cceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEe
Confidence 5567777777778877653 368999999999999889999999999999999999999999999999888999999
Q ss_pred ccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCCcceecccc---hhhh
Q 005374 193 LGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKE---SMGK 269 (699)
Q Consensus 193 c~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~---~~~~ 269 (699)
|++++. ||++++ |+++|||++|++|.. ...|.|.++++.|++|+.+++ .|....+++. +.++
T Consensus 173 ~~~~~~---l~~~~~------v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~~--~~~~~~i~~~~~~~~l~ 237 (780)
T 3apo_A 173 CGDDRM---LCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQHV--RSTVTELSTGNFVNAIE 237 (780)
T ss_dssp TTTCSS---CC--------------CEEEEECTTSC----CEECCSCSCHHHHHHHHHTTS--CCCEEECCHHHHHHHHH
T ss_pred CCCcHH---HHHHcC------CceeeeEEEEeCCcE----eeEecCCCCHHHHHHHHHHhc--hhhheeccchhhHHHHH
Confidence 996655 999998 779999999999864 368999999999999999983 3444445554 3466
Q ss_pred hhhhhcCCCcEEEEEEcCCCC-C-chHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcC------CC
Q 005374 270 NFLAKTGPHKVKVIFFSKTGE-R-ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKD------PG 341 (699)
Q Consensus 270 ~Fl~~~~~~~v~vl~f~~~~~-~-~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~------~~ 341 (699)
.|+.. +.+.|++|.++.+ + ....++.++..|++.+.||++.... ...+++++++++.| +++|++ .+
T Consensus 238 ~~~~~---~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~~~f~~v~c~~--~~~l~~~~gi~~~p-~~~f~~~~~~~~~~ 311 (780)
T 3apo_A 238 TAFAA---GVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDA--QDSLCKSLDTTAST-TAYFPPGATLNDRE 311 (780)
T ss_dssp HHHHH---TCEEEEEEECTTSCCCCHHHHHHHHHHTTTTEEEEEEETTT--SHHHHTCC-----C-EEEECTTCCSSTTT
T ss_pred hhhcc---CCCEEEEEecCcccccCHHHHHHHHHHhhccceEEEEEcCC--CHHHHHHhCCCCCc-eeeeccccccCCCc
Confidence 66654 4466777754332 2 3456677888899999999997433 35799999999888 666765 23
Q ss_pred CCceeecCCCChhHHHHHHHHhhccccccCCccccccccccchhhhhhccCcCCCCCCCCCccceEEEEEeccCChhHHH
Q 005374 342 VKPVVYYGSFNNSRLSEVMEQNKLQGLYFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNK 421 (699)
Q Consensus 342 ~~pv~y~g~~~~~~L~~fi~~~~~~~~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~~~~~~~~~ 421 (699)
..++.|.|.++...|..||.. .+| .+..+|..+... .+.. . .++|++.... +...
T Consensus 312 ~~~~~y~g~~~~~~i~~~i~~-~~p----------~v~~it~~~f~~-~~~~-------~----~~lv~F~~~~--~~~~ 366 (780)
T 3apo_A 312 KSSVLFLNSLDAKEIYMEIIH-NLP----------DFELLSANQLED-RLAH-------H----RWLVFFHFGK--NENA 366 (780)
T ss_dssp GGGSEEECCCCHHHHHHHHHH-HSC----------CCCEECHHHHHH-HHTT-------S----EEEEEEECC-------
T ss_pred ccceeccccccHHHHHHHHHH-hCC----------CcccCCHHHHHH-Hhcc-------C----CeEEEEecCC--cccc
Confidence 456789999999999999994 677 788887655543 2211 1 4565555321 1111
Q ss_pred HHHHHHHHHHhhccCcccccccccccchhHHHhcCCCeEEEEEEeCcchHHHHHHh
Q 005374 422 MRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEAQDRYCSFY 477 (699)
Q Consensus 422 ~~~~lr~~a~~l~~~~~~~~~~~~~~~~~~a~~~k~~~l~F~wvd~~~q~~f~~~f 477 (699)
..+ .+..+|..++++.+.|+|+|+..+.++++.|
T Consensus 367 ~~~----------------------~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~ 400 (780)
T 3apo_A 367 NDP----------------------ELKKLKTLLKNEHIQVVRFDCSSAPGICSDL 400 (780)
T ss_dssp CCG----------------------GGGGHHHHHGGGTEEEEEEEGGGCHHHHHHT
T ss_pred chH----------------------HHHHHHHhhccCceeEEEEeCCCchhhHhhc
Confidence 222 3344455777677999999999888999876
No 2
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=2e-36 Score=329.56 Aligned_cols=322 Identities=14% Similarity=0.224 Sum_probs=247.4
Q ss_pred ceEEEecCCCCcccccCCCcEEEEEeccCCCCC---CCcc---hHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhCCC
Q 005374 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLC---GQFS---GAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPI 208 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hC---k~l~---p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~~i 208 (699)
+.|.+||.+||++.|.+++++||+||||||+|| ++++ |+|+++|+.+++. +.+++|||++++. ||++++
T Consensus 13 ~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~---l~~~~~- 88 (367)
T 3us3_A 13 DRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAA---VAKKLG- 88 (367)
T ss_dssp CCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHH---HHHHHT-
T ss_pred CccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHH---HHHHcC-
Confidence 358999999999999888999999999999996 3333 6999999999875 6999999996554 999998
Q ss_pred CcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcCC
Q 005374 209 GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT 288 (699)
Q Consensus 209 ~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~ 288 (699)
|++||||++|++|. +..|.|.|++++|++|+.+++ .|.+..+++.+.++.|+... ...+.|.||.+.
T Consensus 89 -----V~~~PTl~~f~~G~-----~~~y~G~~~~~~i~~~i~~~~--~~~v~~i~~~~~~~~~~~~~-~~~~vv~ff~~~ 155 (367)
T 3us3_A 89 -----LTEEDSIYVFKEDE-----VIEYDGEFSADTLVEFLLDVL--EDPVELIEGERELQAFENIE-DEIKLIGYFKNK 155 (367)
T ss_dssp -----CCSTTEEEEEETTE-----EEECCSCCSHHHHHHHHHHHH--SCSEEECCSHHHHHHHHHCC-SSCEEEEECSCT
T ss_pred -----CCcCceEEEEECCc-----EEEeCCCCCHHHHHHHHHHhc--CCCcEEcCCHHHHHHHhccC-CCcEEEEEECCC
Confidence 67999999999884 368999999999999999983 56666676655588888621 234555566654
Q ss_pred CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCC-CChhHHHHHHHHhhccc
Q 005374 289 GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSRLSEVMEQNKLQG 367 (699)
Q Consensus 289 ~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~-~~~~~L~~fi~~~~~~~ 367 (699)
+....+.+..+|..+++.+.||.+. ...++++|+|+ .|+|++|+.++..++.|.|. ++.+.|.+||+.+.+|
T Consensus 156 ~~~~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~~v~-~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p- 228 (367)
T 3us3_A 156 DSEHYKAFKEAAEEFHPYIPFFATF-----DSKVAKKLTLK-LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRS- 228 (367)
T ss_dssp TCHHHHHHHHHHHHHTTTSCEEEEC-----CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSC-
T ss_pred CchHHHHHHHHHHhhcCCcEEEEEC-----CHHHHHHcCCC-CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCcc-
Confidence 4445567788999999999999874 35799999998 49999999988888999985 8999999999999999
Q ss_pred cccCCccccccccccchhhhhhccCcCCCCCCCCCccceEEEEEeccCChhHHHHHHHHHHHHHhhccCccccccccccc
Q 005374 368 LYFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQS 447 (699)
Q Consensus 368 ~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~~~~~~~~~~~~~lr~~a~~l~~~~~~~~~~~~~~ 447 (699)
.++++|.++.....+.. ..+ .+|++++.....+.+++.+.|+++|+
T Consensus 229 ---------~v~elt~~~~~~~~~~~-----~~~----~~~~~f~~~~~~~~~~~~~~l~~vA~---------------- 274 (367)
T 3us3_A 229 ---------TLRKLKPESMYETWEDD-----MDG----IHIVAFAEEADPDGYEFLEILKSVAQ---------------- 274 (367)
T ss_dssp ---------SEEECCGGGHHHHHHSC-----BTT----EEEEEECCTTSHHHHHHHHHHHHHHH----------------
T ss_pred ---------ceeecChhhHHHHHhhc-----cCC----cEEEEEEcCCChhHHHHHHHHHHHHH----------------
Confidence 89999999887665421 011 35555554445567788888888888
Q ss_pred chhHHHhcCCC-eEEEEEEeCcchHHHHHH----hccccccccccCCcCCCCCCCeEEEEEeecCCcccc-ceeeccccc
Q 005374 448 LAPAAVAFRNK-RLTFAWLDGEAQDRYCSF----YLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDE-AKIERKPRN 521 (699)
Q Consensus 448 ~~~~a~~~k~~-~l~F~wvd~~~q~~f~~~----fl~~~~~~~~c~~~~~~~~~p~lvI~~~rr~~~~~~-~~~~~~~~~ 521 (699)
+|+++ ++.|+|+|+..+...+++ |.... +.|.|+|+ |.+..+ .+|.
T Consensus 275 ------~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~-------------~~P~~~i~----~~~~~~~~~y~----- 326 (367)
T 3us3_A 275 ------DNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDL-------------SAPQIGVV----NVTDADSVWME----- 326 (367)
T ss_dssp ------HTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCT-------------TSCEEEEE----ETTTCCEEECC-----
T ss_pred ------HcCCCCceEEEEECCccchhHHHHHHHhcCCCC-------------CCCeEEEE----ecccccceeec-----
Confidence 88875 699999999987755443 52211 24999998 654311 2443
Q ss_pred cccccccccCCccccchhccCCCCChHHHHHHHHHHhc
Q 005374 522 IWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQ 559 (699)
Q Consensus 522 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ 559 (699)
+ +++ .+.-+.+.|.+||++++.
T Consensus 327 -~---~~~------------~~~~t~~~i~~F~~~~~~ 348 (367)
T 3us3_A 327 -M---DDE------------EDLPSAEELEDWLEDVLE 348 (367)
T ss_dssp -C---CTT------------SCCCCHHHHHHHHHHHHH
T ss_pred -C---Ccc------------cccCCHHHHHHHHHHHHc
Confidence 2 221 112367899999999998
No 3
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=1.2e-34 Score=312.98 Aligned_cols=320 Identities=13% Similarity=0.185 Sum_probs=247.2
Q ss_pred ceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchH-------HHHHHHHhhcc-cceeeeeccchhhhhHHHHhCC
Q 005374 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGA-------WKTIAALLEGI-ANTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~-------~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~~ 207 (699)
+.|.+||.+||++.+.++++|||+||||||+ |++++|. |+++|+.+++. +.+++|||++++. +|++++
T Consensus 11 ~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~---l~~~~~ 86 (350)
T 1sji_A 11 DRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAK---LAKKLG 86 (350)
T ss_dssp CCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHH---HHHHHT
T ss_pred CccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHH---HHHhcC
Confidence 3589999999999998889999999999999 9999999 99999999875 6999999996554 999998
Q ss_pred CCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhh-hcCCCcEEEEEEc
Q 005374 208 IGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLA-KTGPHKVKVIFFS 286 (699)
Q Consensus 208 i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~-~~~~~~v~vl~f~ 286 (699)
|++|||+++|++|. ...|.|.++.++|++|+.+.+ .|....+++.+.++.|+. .. ..+.|.||.
T Consensus 87 ------v~~~Pt~~~~~~g~-----~~~~~G~~~~~~l~~~i~~~~--~~~~~~l~~~~~~~~~~~~~~--~~~vv~ff~ 151 (350)
T 1sji_A 87 ------FDEEGSLYVLKGDR-----TIEFDGEFAADVLVEFLLDLI--EDPVEIINSKLEVQAFERIED--QIKLIGFFK 151 (350)
T ss_dssp ------CCSTTEEEEEETTE-----EEEECSCCCHHHHHHHHHTTS--SCSEEECCSHHHHHHHHHCCS--SCEEEEECS
T ss_pred ------CCccceEEEEECCc-----EEEecCCCCHHHHHHHHHHhc--CCcceeccchHHHHHHhccCC--CcEEEEEEC
Confidence 67999999999885 368999999999999999883 465555766555788876 43 235555666
Q ss_pred CCCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCC-CChhHHHHHHHHhhc
Q 005374 287 KTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSRLSEVMEQNKL 365 (699)
Q Consensus 287 ~~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~-~~~~~L~~fi~~~~~ 365 (699)
+.+....+.+..+|..+++.+.||.+. .++++++|+++ .|+|++|+++++.++.|.|+ ++.+.|.+||+.+.+
T Consensus 152 ~~~~~~~~~~~~~A~~~~~~~~f~~~~-----~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 225 (350)
T 1sji_A 152 SEESEYYKAFEEAAEHFQPYIKFFATF-----DKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQR 225 (350)
T ss_dssp CTTSHHHHHHHHHHHHTTTTSEEEEEC-----CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCC
T ss_pred CCCcHHHHHHHHHHHhhccCcEEEEEC-----CHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCc
Confidence 544444577788999999999999873 35699999998 99999999987888899997 899999999999999
Q ss_pred cccccCCccccccccccchhhhhhccCcCCCCCCCCCccceEEEEEecc-CChhHHHHHHHHHHHHHhhccCcccccccc
Q 005374 366 QGLYFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKMRETIRRVQETLLSDDESNAADT 444 (699)
Q Consensus 366 ~~~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~~-~~~~~~~~~~~lr~~a~~l~~~~~~~~~~~ 444 (699)
| .++++|.++.... |.. + .. .+|+|++.. ...+..++++.|+++|+
T Consensus 226 p----------~v~elt~~~~~~~-~~~-~---~~-----~~~~l~f~~~~~~~~~~~~~~~~~vA~------------- 272 (350)
T 1sji_A 226 P----------TLRRLRPEDMFET-WED-D---LN-----GIHIVAFAERSDPDGYEFLEILKQVAR------------- 272 (350)
T ss_dssp C----------SEEECCTTTHHHH-HHS-C---SS-----SEEEEEECCTTSHHHHHHHHHHHHHHH-------------
T ss_pred c----------chhhcChhhHHHH-hcC-C---CC-----CcEEEEEEcCCCccHHHHHHHHHHHHH-------------
Confidence 9 8999999888664 421 1 00 367766653 23345678888888888
Q ss_pred cccchhHHHhcCC-CeEEEEEEeCcchHHHH----HHhccccccccccCCcCCCCCCCeEEEEEeecCCccccceeeccc
Q 005374 445 DQSLAPAAVAFRN-KRLTFAWLDGEAQDRYC----SFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKP 519 (699)
Q Consensus 445 ~~~~~~~a~~~k~-~~l~F~wvd~~~q~~f~----~~fl~~~~~~~~c~~~~~~~~~p~lvI~~~rr~~~~~~~~~~~~~ 519 (699)
+|++ .++.|+|+|++.+..++ +.|.... +.|.|+|+ |.+.. .+|.
T Consensus 273 ---------~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~-------------~~P~~~i~----~~~~~-~~~~--- 322 (350)
T 1sji_A 273 ---------DNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDL-------------FKPQIGVV----NVTDA-DSVW--- 322 (350)
T ss_dssp ---------HGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCT-------------TSCEEEEE----ESSSS-CEEE---
T ss_pred ---------HhCCCCceEEEEECchhhHHHHHHHHhhcCCCc-------------cCCcEEEE----ecccc-cccc---
Confidence 7773 56999999999888877 4451111 23999998 55331 2443
Q ss_pred cccccccccccCCccccchhccCCCCChHHHHHHHHHHhc
Q 005374 520 RNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQ 559 (699)
Q Consensus 520 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ 559 (699)
+. +.+ .+|..+.+.|.+||++++.
T Consensus 323 ---~~-~~~------------~~~~~~~~~i~~F~~d~~~ 346 (350)
T 1sji_A 323 ---ME-IPD------------DDDLPTAEELEDWIEDVLS 346 (350)
T ss_dssp ---SC-SSC------------CSCCCCHHHHHHHHHHHHT
T ss_pred ---cC-CCc------------ccccCCHHHHHHHHHHHhc
Confidence 10 011 1234467999999999998
No 4
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=317.09 Aligned_cols=335 Identities=11% Similarity=0.121 Sum_probs=222.4
Q ss_pred CcceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhh------cccceeeeeccchhhhhHHHHhCC
Q 005374 134 SVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE------GIANTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 134 ~~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~------g~~~va~Vdc~~~~~~~~L~~k~~ 207 (699)
..+.|..||.+||+..+.++++|||+||||||+||++++|+|+++|+.++ +.+.+++|||++++. ||++++
T Consensus 3 ~~~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~---l~~~~~ 79 (382)
T 2r2j_A 3 LGSEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSD---IAQRYR 79 (382)
T ss_dssp -----CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHH---HHHHTT
T ss_pred CCCceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHH---HHHhcC
Confidence 34568999999999988888999999999999999999999999999994 446899999996554 999998
Q ss_pred CCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcC
Q 005374 208 IGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSK 287 (699)
Q Consensus 208 i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~ 287 (699)
|++|||+++|++|... ...|.|.+++++|++|+.+.+ .|.+..+++.+.++. +.. ...++|.||.+
T Consensus 80 ------v~~~Pt~~~f~~G~~~---~~~~~G~~~~~~l~~~i~~~~--~~~v~~l~~~~~l~~-l~~--~~~~~v~ff~~ 145 (382)
T 2r2j_A 80 ------ISKYPTLKLFRNGMMM---KREYRGQRSVKALADYIRQQK--SDPIQEIRDLAEITT-LDR--SKRNIIGYFEQ 145 (382)
T ss_dssp ------CCEESEEEEEETTEEE---EEECCSCCSHHHHHHHHHHHH--SCCCEEC---------------CCEEEEEESC
T ss_pred ------CCcCCEEEEEeCCcEe---eeeecCcchHHHHHHHHHHhc--cCCceecCCHHHHHH-hcC--CCCEEEEEECC
Confidence 6799999999988532 236999999999999999984 355555554443555 332 23456667764
Q ss_pred CCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCC-CCCceeecCCC-ChhHHHHHHHHhhc
Q 005374 288 TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYYGSF-NNSRLSEVMEQNKL 365 (699)
Q Consensus 288 ~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~-~~~pv~y~g~~-~~~~L~~fi~~~~~ 365 (699)
........+..+|..+++++.|+.+.. ++.+++++++.| |++++.. ...+..|.|.+ +.+.|.+||+.+.+
T Consensus 146 ~~~~~~~~f~~~A~~~~~~~~F~~~~~------~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 218 (382)
T 2r2j_A 146 KDSDNYRVFERVANILHDDCAFLSAFG------DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCV 218 (382)
T ss_dssp SSSHHHHHHHHHHHHHTTTCEEEEEES------CC--------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHS
T ss_pred CCChhHHHHHHHHHHhhccceEEEEeh------hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhccc
Confidence 432223467778999999999988752 367889998888 5444432 23567899998 88999999999999
Q ss_pred cccccCCccccccccccchhhhhhccCcCCCCCCCCCccceEEEEEeccCC-hhHHHHHHHHHHHHHhhccCcccccccc
Q 005374 366 QGLYFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLS-PELNKMRETIRRVQETLLSDDESNAADT 444 (699)
Q Consensus 366 ~~~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~~~~-~~~~~~~~~lr~~a~~l~~~~~~~~~~~ 444 (699)
| .++++|.++..+..|.. . .+|++++.... ...+.+++.+.+++.
T Consensus 219 p----------~v~elt~~~~~~~~~~~-------~----~~~v~f~~~~~~~~~~~~~~~~~~~~~------------- 264 (382)
T 2r2j_A 219 P----------LVREITFENGEELTEEG-------L----PFLILFHMKEDTESLEIFQNEVARQLI------------- 264 (382)
T ss_dssp C----------SSEECCHHHHHHHHTTC-------C----CEEEEEECTTCCHHHHHHHHHHHHHTG-------------
T ss_pred C----------ceEecChhhHHHHhcCC-------C----cEEEEEecCCchHHHHHHHHHHHHHHH-------------
Confidence 9 89999999998877643 2 58888775432 223334443333333
Q ss_pred cccchhHHHhcCCCeEEEEEEeCcchHHHHHHhccccccccccCCcCCCCCCCeEEEEEeecCCccccceeecccccccc
Q 005374 445 DQSLAPAAVAFRNKRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWD 524 (699)
Q Consensus 445 ~~~~~~~a~~~k~~~l~F~wvd~~~q~~f~~~fl~~~~~~~~c~~~~~~~~~p~lvI~~~rr~~~~~~~~~~~~~~~~l~ 524 (699)
.+++ .+.|+|+|++.+..+++.|.... .+.|.|+|+ +..+ .|. ...+
T Consensus 265 ---------~~~~-~i~f~~id~~~~~~~~~~~gl~~------------~~~P~i~i~----~~~~---~y~---~~~~- 311 (382)
T 2r2j_A 265 ---------SEKG-TINFLHADCDKFRHPLLHIQKTP------------ADCPVIAID----SFRH---MYV---FGDF- 311 (382)
T ss_dssp ---------GGTT-TSEEEEEETTTTHHHHHHTTCCG------------GGCSEEEEE----CSSC---EEE---CCCS-
T ss_pred ---------HhCC-eeEEEEEchHHhHHHHHHcCCCc------------cCCCEEEEE----cchh---cCC---CCcc-
Confidence 6775 59999999999999999883322 123888887 5433 243 1011
Q ss_pred ccccccCCccccchhccCCCCChHHHHHHHHHHhcCCCCCCCCcccCCCCCCCC
Q 005374 525 AMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQDGDSKDLPFYRAKTPELVP 578 (699)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~g~~~~l~~~~~~~p~l~~ 578 (699)
.+..+.+.|.+||++++. +.....++++++|+-++
T Consensus 312 -----------------~~~~~~~~i~~F~~d~~~--Gkl~p~~kse~~P~~~~ 346 (382)
T 2r2j_A 312 -----------------KDVLIPGKLKQFVFDLHS--GKLHREFHHGPDPTDTA 346 (382)
T ss_dssp -----------------GGGGSTTHHHHHHHHHHH--TTTSSCC----------
T ss_pred -----------------ccccCHHHHHHHHHHHHC--CCccccccCCCCCCCCC
Confidence 111133789999999999 55566678999999874
No 5
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=100.00 E-value=1.6e-36 Score=304.45 Aligned_cols=197 Identities=26% Similarity=0.504 Sum_probs=169.3
Q ss_pred cCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhhcccCcCCchhhhhhhhhhcc
Q 005374 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEKVRE 113 (699)
Q Consensus 37 ~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~---~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~~~~~~~~~~ 113 (699)
.|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|..+.... .++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~---~~~ 78 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN---QGG 78 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT---CSC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc---ccc
Confidence 48999999999999999999999999999999885 467889999999999999999999999998775433 133
Q ss_pred ccCccccccccCCCCCCCCCCcceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeec
Q 005374 114 QYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (699)
Q Consensus 114 ~~~~~~f~~~~f~f~~~~d~~~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc 193 (699)
++..+.|....|+++... ..|..|+..+|+..+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||
T Consensus 79 ~~~~~~~~~~~fg~~~~~----~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~ 154 (210)
T 3apq_A 79 QYESWSYYRYDFGIYDDD----PEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNC 154 (210)
T ss_dssp CCCCHHHHHHSSSTTTTC----TTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEET
T ss_pred cccccccccccccccCCC----CceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEEC
Confidence 444455554456665532 3578899999999888889999999999999999999999999999988889999999
Q ss_pred cchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 194 GDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 194 ~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
++++. +|++++ |+++||+++|.+|.. ...|.|.++.+.|.+|+.+.+
T Consensus 155 ~~~~~---l~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 155 GDDRM---LCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp TTCHH---HHHHTT------CCSSSEEEEECTTSC----CEECCSCCCHHHHHHHHHHHH
T ss_pred CccHH---HHHHcC------CCcCCeEEEEECCCc----eeEecCCCCHHHHHHHHHHhC
Confidence 96654 999998 669999999988864 367899999999999999884
No 6
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=4.3e-33 Score=312.78 Aligned_cols=331 Identities=16% Similarity=0.194 Sum_probs=252.5
Q ss_pred eEEEecCCCCcccccCC---CcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 137 AFNVVTSEDFPSIFHDS---KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~---~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
.|.+||.+||++.|.++ ++|+|+||||||+||+++.|+|+++|+.+++.+.+++|||++++. ||++++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~---l~~~~~------ 72 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTN---TCNKYG------ 72 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHH---HHHHTT------
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHH---HHHhcC------
Confidence 57899999999999766 999999999999999999999999999999888999999996554 999999
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcCCCCCch
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERAS 293 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~~~ 293 (699)
|++||||++|++|.. ...|.|.++.+.|++|+.+++ .|....+++.+.++.|+... ..+.|.+|.+.+....
T Consensus 73 v~~~Ptl~~~~~g~~----~~~~~G~~~~~~l~~~~~~~~--~~~~~~i~~~~~~~~~~~~~--~~~vv~~~~~~~~~~~ 144 (481)
T 3f8u_A 73 VSGYPTLKIFRDGEE----AGAYDGPRTADGIVSHLKKQA--GPASVPLRTEEEFKKFISDK--DASIVGFFDDSFSEAH 144 (481)
T ss_dssp CCEESEEEEEETTEE----EEECCSCSSHHHHHHHHHHHT--SCSEEEECSHHHHHHHTTSS--SCEEEEEESCTTCHHH
T ss_pred CCCCCEEEEEeCCce----eeeecCccCHHHHHHHHHhhc--ccCceecCCHHHHHHHHhcC--CcEEEEEECCCccchH
Confidence 679999999998853 478999999999999999983 45555566655578888753 2344446755544456
Q ss_pred HHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEc------CCCCCceeec-CCCChhHHHHHHHHhhcc
Q 005374 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK------DPGVKPVVYY-GSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 294 ~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk------~~~~~pv~y~-g~~~~~~L~~fi~~~~~~ 366 (699)
..+..+|..+++++.|+.+. +..++++|+++. +.|++|+ ..+..++.|. |.++.+.|.+||..+++|
T Consensus 145 ~~f~~~a~~~~~~~~F~~~~-----~~~~~~~~~v~~-~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p 218 (481)
T 3f8u_A 145 SEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG 218 (481)
T ss_dssp HHHHHHHHHHTTTSCEEEEC-----CHHHHHHHCSSS-EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhccCceEEEEC-----CHHHHHHhCCCC-CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCC
Confidence 67777999999999999873 467999999986 4588898 5566778888 888999999999999999
Q ss_pred ccccCCccccccccccchhhhhhccCcCCCCCCCCCccceEEEEEeccCCh----hHHHHHHHHHHHHHhhccCcccccc
Q 005374 367 GLYFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSP----ELNKMRETIRRVQETLLSDDESNAA 442 (699)
Q Consensus 367 ~~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~~~~~----~~~~~~~~lr~~a~~l~~~~~~~~~ 442 (699)
.++++|.++.....- . .++++++..... ..+.+++.++++|+
T Consensus 219 ----------~v~e~t~~n~~~~~~---~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~----------- 264 (481)
T 3f8u_A 219 ----------ICPHMTEDNKDLIQG---K----------DLLIAYYDVDYEKNAKGSNYWRNRVMMVAK----------- 264 (481)
T ss_dssp ----------TSCEECTTTHHHHTT---S----------SEEEEEECCCTTTCHHHHHHHHHHHHHHHH-----------
T ss_pred ----------CccccChhHHHHhcC---C----------CceEEEEecccccchhhHHHHHHHHHHHHH-----------
Confidence 899999988766531 1 366665543221 22346777888888
Q ss_pred cccccchhHHHhcCCC--eEEEEEEeCcchHHHHHHhccccccccccCCcCCCCCCCeEEEEEeecCCccccceeecccc
Q 005374 443 DTDQSLAPAAVAFRNK--RLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKPR 520 (699)
Q Consensus 443 ~~~~~~~~~a~~~k~~--~l~F~wvd~~~q~~f~~~fl~~~~~~~~c~~~~~~~~~p~lvI~~~rr~~~~~~~~~~~~~~ 520 (699)
+|+++ .+.|+|+|.+.....++.|.... ...+.|.|+|+ +... .+|.
T Consensus 265 -----------~~~~k~~~i~F~~~D~~~~~~~l~~~gl~~----------~~~~~P~~~i~----~~~~--~ky~---- 313 (481)
T 3f8u_A 265 -----------KFLDAGHKLNFAVASRKTFSHELSDFGLES----------TAGEIPVVAIR----TAKG--EKFV---- 313 (481)
T ss_dssp -----------HHHHTTCCCEEEEEETTTTHHHHGGGTCCC----------CTTCSCEEEEE----CSSS--CEEE----
T ss_pred -----------HhcCCCceEEEEEEcHHHHHHHHHHcCCCc----------ccCCCcEEEEE----cCCC--cccC----
Confidence 66654 39999999998888887773321 12345999988 5433 4666
Q ss_pred ccccccccccCCccccchhccCCCCChH--HHHHHHHHHhcCCCCCCCCcccCCCCCCC
Q 005374 521 NIWDAMQEQEVDPASQLVVRYNGSDEIP--QIAKWVSEIIQDGDSKDLPFYRAKTPELV 577 (699)
Q Consensus 521 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~--~i~~~i~~~~~~g~~~~l~~~~~~~p~l~ 577 (699)
+ ++ +. +.+ .|+.||++++. |.. ...+.++.+|+-.
T Consensus 314 --~---~~-~~--------------t~e~~~l~~f~~~~~~-g~~-~~~~~s~~~p~~~ 350 (481)
T 3f8u_A 314 --M---QE-EF--------------SRDGKALERFLQDYFD-GNL-KRYLKSEPIPESN 350 (481)
T ss_dssp --C---CS-CC--------------CTTSHHHHHHHHHHHH-TCC-CCCCCCCCCCSCC
T ss_pred --C---Cc-cc--------------CccHHHHHHHHHHHhc-CCc-ccccccCCCCCCC
Confidence 3 31 11 335 99999999998 444 4444677777653
No 7
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=1.7e-32 Score=310.01 Aligned_cols=336 Identities=14% Similarity=0.143 Sum_probs=249.1
Q ss_pred cceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
.+.|..||.+||++.+.++++|||+||||||+||+++.|.|+++|+.+++. +.+++|||++++. ||++++
T Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~---l~~~~~------ 83 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQD---LCMEHN------ 83 (504)
T ss_dssp TSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHH---HHHHTT------
T ss_pred CCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHH---HHHhcC------
Confidence 346899999999999988999999999999999999999999999999986 7999999996654 999999
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcCCCCCch
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERAS 293 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~~~ 293 (699)
|++|||+++|.+|... ....|.|.++.+.|++|+.+.+ .|.+..+++ ++.|+.......+.|++|.+......
T Consensus 84 v~~~Pt~~~~~~g~~~--~~~~~~G~~~~~~l~~~l~~~~--~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~ 156 (504)
T 2b5e_A 84 IPGFPSLKIFKNSDVN--NSIDYEGPRTAEAIVQFMIKQS--QPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFN 156 (504)
T ss_dssp CCSSSEEEEEETTCTT--CEEECCSCCSHHHHHHHHHHHT--SCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHH
T ss_pred CCcCCEEEEEeCCccc--cceeecCCCCHHHHHHHHHHhc--CCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHH
Confidence 6699999999998631 1478999999999999999983 355545654 78888753212566777775444456
Q ss_pred HHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCC-C---ChhHHHHHHHHhhccccc
Q 005374 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-F---NNSRLSEVMEQNKLQGLY 369 (699)
Q Consensus 294 ~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~-~---~~~~L~~fi~~~~~~~~~ 369 (699)
..++.+|..+++.+.||.+. +++++|+++ |++|+.++ .++.|.|. + +.+.|.+||..+.+|
T Consensus 157 ~~f~~~A~~~~~~~~F~~~~-------~~~~~~~~~----i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p--- 221 (504)
T 2b5e_A 157 ATFYSMANKHFNDYDFVSAE-------NADDDFKLS----IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALP--- 221 (504)
T ss_dssp HHHHHHHHHTTTTCEEEEEE-------CTTSCCEEE----EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSC---
T ss_pred HHHHHHHHHhhcCcEEEEEH-------HHHHhcCCe----EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccC---
Confidence 67788999999999999874 367778874 88888766 77889998 6 889999999999999
Q ss_pred cCCccccccccccchhhhhhccCcCCCCCCCCCccceEEEEEeccCChhHHHHHHHHHHHHHhhccCcccccccccccch
Q 005374 370 FCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLA 449 (699)
Q Consensus 370 ~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~~~~~~~~~~~~~lr~~a~~l~~~~~~~~~~~~~~~~ 449 (699)
.++++|..+.....- . +. .++++++. .....++++..++++|+
T Consensus 222 -------~v~~~t~~~~~~~~~-~------~~----~~~~l~~~-~~~~~~~~~~~l~~~a~------------------ 264 (504)
T 2b5e_A 222 -------YFGEIDGSVFAQYVE-S------GL----PLGYLFYN-DEEELEEYKPLFTELAK------------------ 264 (504)
T ss_dssp -------SSCBCCHHHHHHHHH-T------TS----CEEEEEES-SHHHHHHHHHHHHHHHH------------------
T ss_pred -------CcccCCHhHHHHHhc-C------CC----cEEEEEec-CcccHHHHHHHHHHHHH------------------
Confidence 899999888765432 1 11 34444432 23344677777777777
Q ss_pred hHHHhcCCCeEEEEEEeCcchHHHHHHhccccccccccCCcCCCCCCCeEEEEEeecCCccccceeeccccccccccccc
Q 005374 450 PAAVAFRNKRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQ 529 (699)
Q Consensus 450 ~~a~~~k~~~l~F~wvd~~~q~~f~~~fl~~~~~~~~c~~~~~~~~~p~lvI~~~rr~~~~~~~~~~~~~~~~l~~~~~~ 529 (699)
+|+++ +.|+|+|++.+..+++.|...+ +.|.|+|+ +.... .+|. +..+ ++
T Consensus 265 ----~~~~~-i~F~~id~~~~~~~~~~~gl~~-------------~~P~v~i~----~~~~~-~ky~---~~~~----~~ 314 (504)
T 2b5e_A 265 ----KNRGL-MNFVSIDARKFGRHAGNLNMKE-------------QFPLFAIH----DMTED-LKYG---LPQL----SE 314 (504)
T ss_dssp ----HTTTT-CEEEEEEHHHHTTHHHHTTCCS-------------CSSEEEEE----ETTTT-EEEE---CCCC----CH
T ss_pred ----hcCCe-eEEEEEehhhhHHHHHHcCCcc-------------cCCEEEEE----eCCcC-cccC---CCCC----cc
Confidence 78865 9999999999999999883322 33888887 43321 5776 2111 11
Q ss_pred cCCccccchhccCCC--CChHHHHHHHHHHhcCCCCCCCCcccCCCCCC
Q 005374 530 EVDPASQLVVRYNGS--DEIPQIAKWVSEIIQDGDSKDLPFYRAKTPEL 576 (699)
Q Consensus 530 ~~~~~~~~~~~~~g~--~~~~~i~~~i~~~~~~g~~~~l~~~~~~~p~l 576 (699)
+. .+.+.+. .+.+.|..|+.+++. +.....+.++.+|+-
T Consensus 315 ~~------~~~~~~~~~~~~~~l~~f~~~~~~--g~~~p~~~s~~~p~~ 355 (504)
T 2b5e_A 315 EA------FDELSDKIVLESKAIESLVKDFLK--GDASPIVKSQEIFEN 355 (504)
T ss_dssp HH------HHTCCSCCCCCHHHHHHHHHHHHH--TCCCCCCCCCCCCCC
T ss_pred ch------hhccccccccCHHHHHHHHHHHHc--CCCChhhhcCCCCcc
Confidence 00 0001111 245899999999998 444555466666653
No 8
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.6e-27 Score=248.29 Aligned_cols=230 Identities=17% Similarity=0.247 Sum_probs=182.8
Q ss_pred cceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
...|++||.++|++.| +.++++||.||||||++|+++.|.|+++|+.+.+.+.|+.|||+... ...||++++
T Consensus 16 ~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~-~~~l~~~~~------ 88 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNK-NKALCAKYD------ 88 (298)
T ss_dssp CTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTT-THHHHHHTT------
T ss_pred CCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCcc-CHHHHHhCC------
Confidence 4568999999999999 57889999999999999999999999999999988899999998322 234999998
Q ss_pred cccccEEEEcCCCCCC-------------CCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcE
Q 005374 214 RRGLPSLVAFPPGCKS-------------SDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKV 280 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~-------------~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v 280 (699)
|+++||+++|.+|... ......|.|.|++++|++|+.+++ .|.+..+++.+.++.|+... +.+
T Consensus 89 I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~--~~~v~~i~~~~~l~~~l~~~--~~~ 164 (298)
T 3ed3_A 89 VNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI--RSYVKKFVRIDTLGSLLRKS--PKL 164 (298)
T ss_dssp CCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTC--CCCEEECSCGGGHHHHHTSC--SSE
T ss_pred CCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhc--ccccEEcCCHHHHHHHHhcC--Cce
Confidence 6799999999988510 012578999999999999999982 24444465555578888753 568
Q ss_pred EEEEEcCCCCCchHHHHHHHHhccCCceEEEEEccccccHhHH--hhcC-----C-------------CCCCEEEEEcCC
Q 005374 281 KVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWW--NTFE-----V-------------ESAPAIVFLKDP 340 (699)
Q Consensus 281 ~vl~f~~~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~--~kf~-----V-------------~~~PtIvlfk~~ 340 (699)
+|++|+++. ...+.++.+|..|++++.||.+...+. ..+. ++|+ | ...|+|++|+..
T Consensus 165 ~vi~fs~~~-~~~~~f~~~A~~~~~~~~F~~v~~~~~--a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~ 241 (298)
T 3ed3_A 165 SVVLFSKQD-KISPVYKSIALDWLGKFDFYSISNKKL--KQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDAD 241 (298)
T ss_dssp EEEEEESSS-SCCHHHHHHHHHTBTTEEEEEEEGGGC--CCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETT
T ss_pred EEEEEcCCC-cchHHHHHHHHHhhcCcEEEEEcchHh--hhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCC
Confidence 888887553 467889999999999999999974321 1111 2333 2 568999999998
Q ss_pred CCCceeecC-CCChhHHHHHHH--HhhccccccCCccccccccccchhhhh
Q 005374 341 GVKPVVYYG-SFNNSRLSEVME--QNKLQGLYFCGTCVSELPQLRSVTSME 388 (699)
Q Consensus 341 ~~~pv~y~g-~~~~~~L~~fi~--~~~~~~~~~~~~~~~~vp~Lts~s~~~ 388 (699)
+.+++.|.| .++.+.|.+||. .+++| .+++||.+..+.
T Consensus 242 ~~~~~~y~g~~~~~~~i~~fi~~~~~~~p----------~~~~ls~~~~~~ 282 (298)
T 3ed3_A 242 KDKFWEYEGNSINKNDISKFLRDTFSITP----------NEGPFSRRSEYI 282 (298)
T ss_dssp TTEEEECCCSSCCHHHHHHHHHHHHTCCC----------SSSTTSHHHHHH
T ss_pred CCceEEeccccCCHHHHHHHHHhhcCCCC----------CcCCCchHHHHH
Confidence 889999985 689999999999 78888 899998866543
No 9
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.93 E-value=2.4e-24 Score=255.74 Aligned_cols=287 Identities=15% Similarity=0.168 Sum_probs=220.9
Q ss_pred eEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
.|.++|.++|+.. .+++++|.|||+||++|+.+.|.|+++|+.+++.+.|+.|||+++.. +|++++ |++
T Consensus 441 ~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~---~~~~~~------v~~ 509 (780)
T 3apo_A 441 HVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEG---LCNMYN------IQA 509 (780)
T ss_dssp CEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CCS
T ss_pred CCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHH---HHHHcC------CCc
Confidence 4899999999877 78899999999999999999999999999998888999999996655 999998 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCc-EEEEEEcCC---CCCc
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHK-VKVIFFSKT---GERA 292 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~-v~vl~f~~~---~~~~ 292 (699)
+||+++|.+|. ...|.|.++.++|.+|+.+.+. |.+..++..+ ++.++.....+. +.|.|+..- |...
T Consensus 510 ~Pt~~~~~~g~-----~~~~~g~~~~~~l~~fi~~~~~--~~v~~l~~~~-f~~~v~~~~~~~~~lv~F~ap~C~~c~~~ 581 (780)
T 3apo_A 510 YPTTVVFNQSS-----IHEYEGHHSAEQILEFIEDLRN--PSVVSLTPST-FNELVKQRKHDEVWMVDFYSPWSHPSQVL 581 (780)
T ss_dssp SSEEEEEETTE-----EEEECSCSCHHHHHHHHHHHHS--CSEEECCHHH-HHHHTTTCCTTCCEEEEEECTTCHHHHHH
T ss_pred CCeEEEEcCCc-----eeeecCcccHHHHHHHHHhhcc--cceeecCccc-HHHHhhccCCCCeEEEEEECCCCHHHHHh
Confidence 99999997763 2578999999999999999843 6555566544 677776433233 445555432 3345
Q ss_pred hHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCC---CceeecC-CCChhHHHHHHHHhhcccc
Q 005374 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV---KPVVYYG-SFNNSRLSEVMEQNKLQGL 368 (699)
Q Consensus 293 ~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~---~pv~y~g-~~~~~~L~~fi~~~~~~~~ 368 (699)
.+.+..+|..+++.+.|+.+.... ...++++|+|.++|+|++|+.++. .+..|.| .++.+.|.+||..+..+
T Consensus 582 ~p~~~~lA~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~-- 657 (780)
T 3apo_A 582 MPEWKRMARTLTGLINVGSVDCGQ--YHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQ-- 657 (780)
T ss_dssp HHHHHHHHHHHTTTSEEEEEETTT--THHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCC--
T ss_pred hHHHHHHHHHhhCCeEEEEEECcc--hHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhccc--
Confidence 688888999999999999986432 467899999999999999988654 4677899 78999999999998766
Q ss_pred ccCCccccccccccchhhhhhccCcCCCCCCCCCccceEEEEEec-cCChhHHHHHHHHHHHHHhhccCccccccccccc
Q 005374 369 YFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAG-RLSPELNKMRETIRRVQETLLSDDESNAADTDQS 447 (699)
Q Consensus 369 ~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~-~~~~~~~~~~~~lr~~a~~l~~~~~~~~~~~~~~ 447 (699)
.+..++..+..+..+.. ++ .++|.+. .-...-..+...+.++++
T Consensus 658 --------~v~~l~~~~~~~~~~~~------~~-----~v~v~F~a~wC~~C~~~~p~~~~la~---------------- 702 (780)
T 3apo_A 658 --------ASIDLTPQTFNEKVLQG------KT-----HWVVDFYAPWSGPSQNFAPEFELLAR---------------- 702 (780)
T ss_dssp --------CSEEECHHHHHHHTTTC------SS-----CEEEEEECTTCHHHHHHHHHHHHHHH----------------
T ss_pred --------ccccCCHHHHHHHHhcC------CC-----eEEEEEECCCCHHHHHHHHHHHHHHH----------------
Confidence 78888887776655432 22 3444443 222333455666666666
Q ss_pred chhHHHhcCCCeEEEEEEeCcchHHHHHHhccccccccccCCcCCCCCCCeEEEE
Q 005374 448 LAPAAVAFRNKRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIV 502 (699)
Q Consensus 448 ~~~~a~~~k~~~l~F~wvd~~~q~~f~~~fl~~~~~~~~c~~~~~~~~~p~lvI~ 502 (699)
++++ .+.|++||.+.+.++++.|- ....|.++++
T Consensus 703 ------~~~~-~~~~~~vd~~~~~~~~~~~~--------------v~~~Pt~~~~ 736 (780)
T 3apo_A 703 ------MIKG-KVRAGKVDCQAYPQTCQKAG--------------IKAYPSVKLY 736 (780)
T ss_dssp ------HHTT-TCEEEEEETTTCHHHHHHTT--------------CCSSSEEEEE
T ss_pred ------HhcC-CceEEEEECCCCHHHHHhcC--------------CCcCCEEEEE
Confidence 6765 49999999998888888762 2234999886
No 10
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.91 E-value=1.1e-23 Score=213.47 Aligned_cols=209 Identities=16% Similarity=0.259 Sum_probs=166.7
Q ss_pred ceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc---cceeeeeccchhhhhHHHHhCCCCccc
Q 005374 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~---~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
..|..||.++|+..+.++++++|.|||+||++|+++.|.|+++++.+++. +.++.|||++++. +|++++
T Consensus 15 ~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~----- 86 (241)
T 3idv_A 15 NGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASV---LASRFD----- 86 (241)
T ss_dssp TTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHH---HHHHTT-----
T ss_pred CCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHH---HHHhcC-----
Confidence 35899999999999988999999999999999999999999999999876 6999999996655 999998
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccC----Cccee-cccchhhhhhhhhcCCCcEEEEEE-c
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKL----PRIFY-YTKESMGKNFLAKTGPHKVKVIFF-S 286 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~l----P~~~~-it~~~~~~~Fl~~~~~~~v~vl~f-~ 286 (699)
|+++||+++|.+|.. ..|.|.++.+.|.+|+.+.+... |.... ++..+ ++.++.. +++.++.| .
T Consensus 87 -v~~~Pt~~~~~~g~~-----~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~v~f~a 156 (241)
T 3idv_A 87 -VSGYPTIKILKKGQA-----VDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKEN-FDEVVND---ADIILVEFYA 156 (241)
T ss_dssp -CCSSSEEEEEETTEE-----EECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTT-HHHHHHH---CSEEEEEEEC
T ss_pred -CCcCCEEEEEcCCCc-----ccccCcccHHHHHHHHhhccCcccccccccceeccHHH-HHHhhcc---CCeEEEEEEC
Confidence 669999999988753 47999999999999999874321 11222 34333 6666654 23555555 3
Q ss_pred C---CCCCchHHHHHHHHhccCC---ceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHH
Q 005374 287 K---TGERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (699)
Q Consensus 287 ~---~~~~~~~~~~~~A~~~~~~---~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi 360 (699)
. .|....+.+..+|..+.+. +.|+.|.... ..+++++|+|.++||+++|+++ +.+.|.|.++.+.|.+||
T Consensus 157 ~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l 232 (241)
T 3idv_A 157 PWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA--ETDLAKRFDVSGYPTLKIFRKG--RPYDYNGPREKYGIVDYM 232 (241)
T ss_dssp TTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCSSSEEEEEETT--EEEECCSCCSHHHHHHHH
T ss_pred CCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC--CHHHHHHcCCcccCEEEEEECC--eEEEecCCCCHHHHHHHH
Confidence 2 3344668888888887654 8888887543 4789999999999999999864 456689999999999999
Q ss_pred HHhhcc
Q 005374 361 EQNKLQ 366 (699)
Q Consensus 361 ~~~~~~ 366 (699)
.++.-+
T Consensus 233 ~~~~~~ 238 (241)
T 3idv_A 233 IEQSGA 238 (241)
T ss_dssp HHHTTC
T ss_pred HhhhCC
Confidence 987554
No 11
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.85 E-value=7.9e-21 Score=194.39 Aligned_cols=207 Identities=13% Similarity=0.161 Sum_probs=147.9
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc---ccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g---~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
.|..||.++|+..+ +++++++|+|||+||++|+++.|.|+++++.+.+ .+.+++|||+.+ ....+|++++
T Consensus 13 ~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~~----- 86 (244)
T 3q6o_A 13 PLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDFN----- 86 (244)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHTT-----
T ss_pred CceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHcC-----
Confidence 57999999999988 6779999999999999999999999999999987 579999999532 2234999998
Q ss_pred ccccccEEEEcCCCCCCC-CccccccCCcCHHHHHHHHHHHhccCC----c----ceecccchhhhhhhhhcCCCcEEEE
Q 005374 213 FRRGLPSLVAFPPGCKSS-DCMTRFEGELSVDAVTDWFATAILKLP----R----IFYYTKESMGKNFLAKTGPHKVKVI 283 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~-~~~~~Y~G~rs~~~Iv~fi~k~v~~lP----~----~~~it~~~~~~~Fl~~~~~~~v~vl 283 (699)
|+++||+++|.+|.... .....|.| ++.+.|.+|+.+.+.... . ...++.. .++.|+... .....++
T Consensus 87 -v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~-~l~~~~~~~-~~~~~al 162 (244)
T 3q6o_A 87 -IPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLE-EIDGFFARN-NEEYLAL 162 (244)
T ss_dssp -CCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHH-HHHTHHHHC-CCSEEEE
T ss_pred -CCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHH-HHHHHhhcC-CCceEEE
Confidence 66999999999865421 12235566 799999999988754322 1 1123333 367787653 3567788
Q ss_pred EEcCCCCCchHHHHHHHHhcc--CCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCC-CChhHHHHHH
Q 005374 284 FFSKTGERASPFVRQISRNYW--AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSRLSEVM 360 (699)
Q Consensus 284 ~f~~~~~~~~~~~~~~A~~~~--~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~-~~~~~L~~fi 360 (699)
+|++.+ ....+.++..+. ..+.++.+.. ....++++|||+++|++++|..+++ ...+... -+.+.+..++
T Consensus 163 ~f~~~~---~~~~~~~~~d~~~~~~i~v~~~~~---~~~~l~~~f~v~~~Pslvl~~~~g~-~~~~~~~~~~r~~~~~~l 235 (244)
T 3q6o_A 163 IFEXGG---SYLAREVALDLSQHKGVAVRRVLN---TEANVVRKFGVTDFPSCYLLFRNGS-VSRVPVLMESRSFYTAYL 235 (244)
T ss_dssp EEECTT---CCHHHHHHHHTTTCTTEEEEEEET---TCHHHHHHHTCCCSSEEEEEETTSC-EEECCCSSSSHHHHHHHH
T ss_pred EEEECC---cchHHHHHHHhccCCceEEEEEeC---chHHHHHHcCCCCCCeEEEEeCCCC-eEeeccccccHHHHHHHH
Confidence 887543 345555555555 4566666642 2368999999999999999987664 3334322 2344455554
No 12
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.79 E-value=7.3e-19 Score=199.24 Aligned_cols=191 Identities=14% Similarity=0.183 Sum_probs=143.5
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc---ccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g---~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
.|.+||.++|+..+ +++++++|.|||+||++|+++.|.|+++|+.+++ .+.|++|||+++ ....+|++++
T Consensus 13 ~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d-~~~~l~~~~~----- 86 (519)
T 3t58_A 13 PLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEE-TNSAVCREFN----- 86 (519)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSG-GGHHHHHHTT-----
T ss_pred CcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcc-ccHHHHHHcC-----
Confidence 57999999999887 6789999999999999999999999999999987 579999999642 2334999998
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCC----c----ceecccchhhhhhhhhcCCCcEEEEE
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP----R----IFYYTKESMGKNFLAKTGPHKVKVIF 284 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP----~----~~~it~~~~~~~Fl~~~~~~~v~vl~ 284 (699)
|+++||+++|.+|...-.....+.|.++.+.|.+++.+.+.... . ...++..+ ++.|+... +....+++
T Consensus 87 -V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~-l~~~l~~~-~~~~vall 163 (519)
T 3t58_A 87 -IAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLND-IDGFFTRN-KADYLALV 163 (519)
T ss_dssp -CCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHH-HTTGGGSC-CCSEEEEE
T ss_pred -CcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHH-HHHHhccC-CCCeEEEE
Confidence 67999999999754321123456788999999999998854221 1 11233333 67777653 35677888
Q ss_pred EcCCCCCchHHHHHHHHhcc--CCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCC
Q 005374 285 FSKTGERASPFVRQISRNYW--AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (699)
Q Consensus 285 f~~~~~~~~~~~~~~A~~~~--~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~ 342 (699)
|++.+ .+..+.++..|. ..+.++.+.. ....++++|||+++|++++|..+++
T Consensus 164 F~~~~---s~~~~~~~ldl~~~~~v~v~~v~~---~~~~l~~kfgV~~~Pslvl~~~nGk 217 (519)
T 3t58_A 164 FERED---SYLGREVTLDLSQYHAVAVRRVLN---TESDLVNKFGVTDFPSCYLLLRNGS 217 (519)
T ss_dssp EECTT---CCHHHHHHHHTTTCTTEEEEEEET---TCHHHHHHHTCCCSSEEEEEETTSC
T ss_pred ecCCc---hHHHHHHHHHhhccCCeeEEEecC---chHHHHHHcCCCCCCeEEEEeCCCc
Confidence 87543 335566666665 3466766642 2467999999999999999998764
No 13
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.78 E-value=1.2e-18 Score=175.72 Aligned_cols=189 Identities=10% Similarity=0.036 Sum_probs=138.2
Q ss_pred CCCcEEEEEe-----ccCCCCCCCcchHHHHHHHHh--hcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcC
Q 005374 152 DSKPWLIQVY-----SDGSYLCGQFSGAWKTIAALL--EGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFP 224 (699)
Q Consensus 152 ~~~~~lV~FY-----apwC~hCk~l~p~~~~~A~~L--~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~ 224 (699)
...+++|.|| +|||+||+++.|+|+++|+.+ .+.+.+++|||++++. ||++|+ |++||||++|.
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~~~Ptl~~~~ 89 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKE---ETEKYG------VDRVPTIVIEG 89 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHH---HHHHTT------CCBSSEEEEES
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHH---HHHHcC------CCcCcEEEEEC
Confidence 4566666666 899999999999999999998 5667999999996555 999999 67999999998
Q ss_pred CCCCCCCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEE-EEcCCC---CCchHHHHHHH
Q 005374 225 PGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQIS 300 (699)
Q Consensus 225 ~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl-~f~~~~---~~~~~~~~~~A 300 (699)
+|. ....|.|.++.+.+.+|+...+........++..+ ++.++.. ...+.++ |+...| ....+.+..++
T Consensus 90 ~~~----~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~-~~~~~~~--~~~~~~v~F~a~wC~~C~~~~~~~~~~~ 162 (229)
T 2ywm_A 90 DKD----YGIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKT-LELLQVV--DIPIEIWVFVTTSCGYCPSAAVMAWDFA 162 (229)
T ss_dssp SSC----CCEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHH-HHHHTTC--CSCEEEEEEECTTCTTHHHHHHHHHHHH
T ss_pred CCc----ccceecCCccHHHHHHHHHHHHhccCCccCCCHHH-HHHHHhc--CCCeEEEEEECCCCcchHHHHHHHHHHH
Confidence 654 35789999999999999987643112222243332 4444422 2334344 554433 22456777788
Q ss_pred HhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 301 RNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 301 ~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
..+ +.+.|+.|.... ..+++++|+|.++|++++ +++ ...+.|..+.+.|.+|++..
T Consensus 163 ~~~-~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 163 LAN-DYITSKVIDASE--NQDLAEQFQVVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp HHC-TTEEEEEEEGGG--CHHHHHHTTCCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHHH
T ss_pred HHC-CCeEEEEEECCC--CHHHHHHcCCcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHHH
Confidence 877 578888886433 478999999999999998 233 34488999999999998765
No 14
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.76 E-value=1.7e-18 Score=174.01 Aligned_cols=193 Identities=15% Similarity=0.144 Sum_probs=140.0
Q ss_pred CCCcEEEEEecc-CCCCCCCcchHHHHHHHHhhcccceeeeeccc--hhhhhHHHHhCCCCcccccccccEEEEcCCCCC
Q 005374 152 DSKPWLIQVYSD-GSYLCGQFSGAWKTIAALLEGIANTGMVELGD--IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCK 228 (699)
Q Consensus 152 ~~~~~lV~FYap-wC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~--~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~ 228 (699)
.+.+++|.||+| ||++|+.+.|.|+++|+. .+.+.++.|||++ ++ .+|++++ |+++||+++|.+|..
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~---~~~~~~~------v~~~Pt~~~~~~g~~ 90 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGK---ELAKRYR------IDRAPATTITQDGKD 90 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHH---HHHHHTT------CCSSSEEEEEETTBC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccH---HHHHHcC------CCcCceEEEEcCCce
Confidence 456788999999 999999999999999964 5667999999995 44 4999998 669999999988753
Q ss_pred CCCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEE-EEcCCC---CCchHHHHHHHHhcc
Q 005374 229 SSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYW 304 (699)
Q Consensus 229 ~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl-~f~~~~---~~~~~~~~~~A~~~~ 304 (699)
....|.|.++.+.+.+|+...+........++... ++.+... ...+.++ |+...| ....+.+..++..+.
T Consensus 91 ---~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~-~~~~~~~--~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 91 ---FGVRYFGLPAGHEFAAFLEDIVDVSREETNLMDET-KQAIRNI--DQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp ---CSEEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHH-HHHHTTC--CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred ---eeEEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHH-HHHHHhc--CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 23678999999999999987532111111233222 3333321 2345244 444332 334577777888876
Q ss_pred ----CCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 305 ----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 305 ----~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+.+.|+.|.... ...++++|+|.++||+++|+++ .....+.|..+.+.|.+||+..
T Consensus 165 ~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 165 KAGKGKILGDMVEAIE--YPEWADQYNVMAVPKIVIQVNG-EDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp HTTCCCEEEEEEEGGG--CHHHHHHTTCCSSCEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred cccCCcEEEEEEEccc--CHHHHHhCCCcccCeEEEEeCC-ceeEEEcCCCCHHHHHHHHHHh
Confidence 578888886432 4779999999999999999854 3445578989999999998764
No 15
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.76 E-value=2.6e-18 Score=185.36 Aligned_cols=209 Identities=14% Similarity=0.149 Sum_probs=156.7
Q ss_pred eEEEecCCCCccccc-CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeecc--chhhhhHHHHhCCCCcccc
Q 005374 137 AFNVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG--DIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~-~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~--~~~~~~~L~~k~~i~~~f~ 213 (699)
.|.++|.+||...+. ...+++|.||++||++|+++.|.|+++|+.++|.+.++.|||+ +++. +|+.+|
T Consensus 118 ~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~---~~~~fg------ 188 (361)
T 3uem_A 118 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQR---ILEFFG------ 188 (361)
T ss_dssp SEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHH---HHHHTT------
T ss_pred cceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHH---HHHHcC------
Confidence 488999999998874 4567899999999999999999999999999998999999999 4444 899999
Q ss_pred ccc--ccEEEEcCCCCCCCCcccccc---CCcCHHHHHHHHHHHhccC----------Cc------ceecccchhhhhhh
Q 005374 214 RRG--LPSLVAFPPGCKSSDCMTRFE---GELSVDAVTDWFATAILKL----------PR------IFYYTKESMGKNFL 272 (699)
Q Consensus 214 V~g--yPTl~~f~~g~~~~~~~~~Y~---G~rs~~~Iv~fi~k~v~~l----------P~------~~~it~~~~~~~Fl 272 (699)
|++ +|++++|..+.. ...|. |.++.+.|.+|+.+.+.+- |. +..++..+ ++.++
T Consensus 189 i~~~~~P~~~~~~~~~~----~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~-f~~~~ 263 (361)
T 3uem_A 189 LKKEECPAVRLITLEEE----MTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKN-FEDVA 263 (361)
T ss_dssp CCTTTCSEEEEEECC------CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTT-HHHHH
T ss_pred CCccCCccEEEEEcCCc----ccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCc-hhhhc
Confidence 546 999999988543 24564 8999999999999875321 11 11133333 45544
Q ss_pred hhcCCCcEEEEEE-cCC---CCCchHHHHHHHHhccCC--ceEEEEEccccccHhHHhhcCCCCCCEEEEEcCC-CCCce
Q 005374 273 AKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPV 345 (699)
Q Consensus 273 ~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~--~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~-~~~pv 345 (699)
.. .+++.+|.| .+- |....|.+..+|..|.+. +.|+.+..... .+++|+|.++||+++|+.+ +..+.
T Consensus 264 ~~--~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~----~~~~~~v~~~Pt~~~~~~~~~~~~~ 337 (361)
T 3uem_A 264 FD--EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTAN----EVEAVKVHSFPTLKFFPASADRTVI 337 (361)
T ss_dssp TC--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTC----BCSSCCCCSSSEEEEECSSSSCCCE
T ss_pred cc--CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCcc----chhhcCCcccCeEEEEECCCCccee
Confidence 22 244555544 332 334568888899988765 67777754332 2789999999999999765 45677
Q ss_pred eecCCCChhHHHHHHHHhhc
Q 005374 346 VYYGSFNNSRLSEVMEQNKL 365 (699)
Q Consensus 346 ~y~g~~~~~~L~~fi~~~~~ 365 (699)
.|.|.++.+.|.+||+.+.-
T Consensus 338 ~~~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 338 DYNGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp ECCSCSSHHHHHHHHTTTSC
T ss_pred EecCCCCHHHHHHHHHhcCC
Confidence 89999999999999998754
No 16
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.76 E-value=5e-19 Score=162.28 Aligned_cols=106 Identities=15% Similarity=0.125 Sum_probs=92.9
Q ss_pred ceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhh-----cccceeeeeccchhhhhHHHHhCCCC
Q 005374 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHLAERKPIG 209 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~-----g~~~va~Vdc~~~~~~~~L~~k~~i~ 209 (699)
+.|..||.++|+..+ ++++++||.||||||++|+++.|.|+++|+.+. +.+.+++|||++++. +|++++
T Consensus 15 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~-- 89 (127)
T 3h79_A 15 SRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPD---VIERMR-- 89 (127)
T ss_dssp CCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHH---HHHHTT--
T ss_pred CceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHh---HHHhcC--
Confidence 468999999999988 578999999999999999999999999999874 346899999996655 999998
Q ss_pred cccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 210 ~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|... .+..|.|.++.+.|.+|+.+.
T Consensus 90 ----v~~~Pt~~~~~~g~~~--~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 ----VSGFPTMRYYTRIDKQ--EPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp ----CCSSSEEEEECSSCSS--SCEECCSCCCHHHHHHHHHHH
T ss_pred ----CccCCEEEEEeCCCCC--CceEecCCccHHHHHHHHHhc
Confidence 6799999999988653 346899999999999999864
No 17
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.73 E-value=1.6e-16 Score=163.52 Aligned_cols=228 Identities=15% Similarity=0.153 Sum_probs=159.1
Q ss_pred cCCcceecccchhhhhhhhhcCCCcEEEEEEcCCCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEE
Q 005374 255 KLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAI 334 (699)
Q Consensus 255 ~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtI 334 (699)
.+|.+..+++.+.++.|+... ..++|.||.+.+......+..+|..+++++.||.+. .++++++|+++. |+|
T Consensus 4 ~gP~v~~l~s~~~~~~~l~~~--~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~-----~~~v~~~~~~~~-p~i 75 (252)
T 2h8l_A 4 GSPASVPLRTEEEFKKFISDK--DASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNG-EGI 75 (252)
T ss_dssp --CCEEECCSHHHHHHHHTSS--SCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEEC-----CHHHHHHHCSSS-EEE
T ss_pred CCCCceeecCHHHHHHHhhcC--CeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEC-----hHHHHHHhCCCC-CcE
Confidence 378888887766688888753 334555676544334567777999999999999883 356999999985 999
Q ss_pred EEEcC------CCCCceee-cCCCChhHHHHHHHHhhccccccCCccccccccccchhhhhhccCcCCCCCCCCCccceE
Q 005374 335 VFLKD------PGVKPVVY-YGSFNNSRLSEVMEQNKLQGLYFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWY 407 (699)
Q Consensus 335 vlfk~------~~~~pv~y-~g~~~~~~L~~fi~~~~~~~~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~l 407 (699)
++|++ +++.++.| .|+++.+.|.+||..|.+| .++++|..+.... .. . .+
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~P----------lv~e~t~~n~~~~-~~--~----------~~ 132 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG----------ICPHMTEDNKDLI-QG--K----------DL 132 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSC----------SSCEECTTTHHHH-SS--S----------SE
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccC----------CeeecccccHhhh-cC--C----------Ce
Confidence 99986 34677889 9999999999999999999 8999999998765 21 1 47
Q ss_pred EEEEeccCC----hhHHHHHHHHHHHHHhhccCcccccccccccchhHHHhcCC--CeEEEEEEeCcchHHHHHHhcccc
Q 005374 408 CVILAGRLS----PELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRN--KRLTFAWLDGEAQDRYCSFYLFSE 481 (699)
Q Consensus 408 CvI~~~~~~----~~~~~~~~~lr~~a~~l~~~~~~~~~~~~~~~~~~a~~~k~--~~l~F~wvd~~~q~~f~~~fl~~~ 481 (699)
|++++.... +..+.+++.++++|+ +|++ +.+.|+|+|++.+...+++|-...
T Consensus 133 ~v~~~~~~~~~~~~~~~~~~~~~~~vA~----------------------~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~ 190 (252)
T 2h8l_A 133 LIAYYDVDYEKNAKGSNYWRNRVMMVAK----------------------KFLDAGHKLNFAVASRKTFSHELSDFGLES 190 (252)
T ss_dssp EEEEECCBTTTBHHHHHHHHHHHHHHHH----------------------HHHHTTCCCEEEEEETTTTHHHHGGGTCCC
T ss_pred EEEEeecchhhcchhHHHHHHHHHHHHH----------------------HccccCceEEEEEEchHHHHHHHHHcCCCC
Confidence 887775322 234567888888888 6663 359999999998888888773310
Q ss_pred ccccccCCcCCCCCCCeEEEEEeecCCccccceeeccccccccccccccCCccccchhccCCCCChHH--HHHHHHHHhc
Q 005374 482 TSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQ--IAKWVSEIIQ 559 (699)
Q Consensus 482 ~~~~~c~~~~~~~~~p~lvI~~~rr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~--i~~~i~~~~~ 559 (699)
...+.|.|+|+ |... .+|. + ++ +. +.+. |..||++++.
T Consensus 191 ----------~~~~~P~v~i~----~~~~--~ky~------~---~~-~~--------------t~~~~~i~~F~~~~~~ 230 (252)
T 2h8l_A 191 ----------TAGEIPVVAIR----TAKG--EKFV------M---QE-EF--------------SRDGKALERFLQDYFD 230 (252)
T ss_dssp ----------CSCSSCEEEEE----CTTS--CEEE------C---CS-CC--------------CTTSHHHHHHHHHHHH
T ss_pred ----------ccCCCCEEEEE----eCcC--cEec------C---Cc-cc--------------CcchHHHHHHHHHHHC
Confidence 01245999998 6544 5776 3 32 11 3345 9999999998
Q ss_pred CCCCCCCCcccCCCCCCC
Q 005374 560 DGDSKDLPFYRAKTPELV 577 (699)
Q Consensus 560 ~g~~~~l~~~~~~~p~l~ 577 (699)
++....++++++|+-+
T Consensus 231 --Gkl~~~~kSe~iPe~~ 246 (252)
T 2h8l_A 231 --GNLKRYLKSEPIPESN 246 (252)
T ss_dssp --TCSCCCC---------
T ss_pred --CCccccccCCCCCCCC
Confidence 4556677899999984
No 18
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.72 E-value=5.2e-16 Score=159.71 Aligned_cols=228 Identities=14% Similarity=0.080 Sum_probs=160.2
Q ss_pred cCCcceecccchhhhhhhhh-cCCCcEEEEEEcCCCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCE
Q 005374 255 KLPRIFYYTKESMGKNFLAK-TGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPA 333 (699)
Q Consensus 255 ~lP~~~~it~~~~~~~Fl~~-~~~~~v~vl~f~~~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~Pt 333 (699)
.+|.+..+++.+.++.|+.. .. .++|.||.+.+......+..+|..+++.+.||.+. +++++++|+++. |+
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~~--v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~-----~~~v~~~~~v~~-p~ 75 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGDD--VVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTF-----STEIAKFLKVSL-GK 75 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCSS--CEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEEC-----CHHHHHHHTCCS-SE
T ss_pred CCCCceecCCHHHHHHHHhcCCC--eEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEEC-----cHHHHHHcCCCC-Ce
Confidence 47888888876668888875 32 34445666544445667778999999999999873 457899999986 99
Q ss_pred EEEEcC------CCCCceeec--CCCChhHHHHHHHHhhccccccCCccccccccccchhhhhhccCcCCCCCCCCCccc
Q 005374 334 IVFLKD------PGVKPVVYY--GSFNNSRLSEVMEQNKLQGLYFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTI 405 (699)
Q Consensus 334 Ivlfk~------~~~~pv~y~--g~~~~~~L~~fi~~~~~~~~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~ 405 (699)
|++|++ +++.++.|. |.++.+.|.+||..+.+| .++++|..+.....- ++
T Consensus 76 ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~P----------lv~e~t~~n~~~~~~--------~~---- 133 (250)
T 3ec3_A 76 LVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALP----------LVGHRKTSNDAKRYS--------KR---- 133 (250)
T ss_dssp EEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSC----------TEEEECTTTHHHHSC--------SS----
T ss_pred EEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCC----------ceeecCccchhhhhc--------cC----
Confidence 999996 356678888 578999999999999999 899999988765431 22
Q ss_pred eEEEEEeccC-----ChhHHHHHHHHHHHHHhhccCcccccccccccchhHHHhcCCCeEEEEEEeCcchHHHHHHhccc
Q 005374 406 WYCVILAGRL-----SPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEAQDRYCSFYLFS 480 (699)
Q Consensus 406 ~lCvI~~~~~-----~~~~~~~~~~lr~~a~~l~~~~~~~~~~~~~~~~~~a~~~k~~~l~F~wvd~~~q~~f~~~fl~~ 480 (699)
.+|++++..+ .++.+.+++.++++|+ +|+ .+.|+|+|++.+...+++|-..
T Consensus 134 ~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk----------------------~~k--ki~F~~~d~~~~~~~l~~fgl~ 189 (250)
T 3ec3_A 134 PLVVVYYSVDFSFDYRTATQFWRNKVLEVAK----------------------DFP--EYTFAIADEEDYATEVKDLGLS 189 (250)
T ss_dssp SEEEEEECCCCSTTTHHHHHHHHHHHHHHHT----------------------TCT--TSEEEEEETTTTHHHHHHTTCS
T ss_pred ccEEEEEecccccccchhHHHHHHHHHHHHH----------------------hhc--ceeEEEEcHHHHHHHHHHcCCC
Confidence 5888777422 3345667888888888 888 4999999999888888877332
Q ss_pred cccccccCCcCCCCCCCeEEEEEeecCCccccceeeccccccccccccccCCccccchhccCCCCChHHHHHHHHHHhcC
Q 005374 481 ETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQD 560 (699)
Q Consensus 481 ~~~~~~c~~~~~~~~~p~lvI~~~rr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~ 560 (699)
.. ...|.++++ |... .+|. + +.++ -+.+.|..|+++++.
T Consensus 190 ~~-----------~~~p~~~~~----~~~~--~ky~------~---~~~~--------------~t~~~i~~Fv~~~~~- 228 (250)
T 3ec3_A 190 ES-----------GGDVNAAIL----DESG--KKFA------M---EPEE--------------FDSDALREFVMAFKK- 228 (250)
T ss_dssp SC-----------SCSCEEEEE----CTTS--CEEE------C---CCCS--------------CCHHHHHHHHHHHHT-
T ss_pred cc-----------CCCcEEEEE----cCCC--ceec------C---Cccc--------------CCHHHHHHHHHHHHC-
Confidence 21 011677777 6544 5887 3 3221 266899999999999
Q ss_pred CCCCCCCcccCCCCCCCC
Q 005374 561 GDSKDLPFYRAKTPELVP 578 (699)
Q Consensus 561 g~~~~l~~~~~~~p~l~~ 578 (699)
++....++++++|+-++
T Consensus 229 -Gkl~p~~kSepiPe~~~ 245 (250)
T 3ec3_A 229 -GKLKPVIKSQPVPKNNK 245 (250)
T ss_dssp -TCCCCCC----------
T ss_pred -CCccceeecCCCCCCCC
Confidence 66677779999999843
No 19
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.71 E-value=4.2e-18 Score=142.49 Aligned_cols=67 Identities=33% Similarity=0.541 Sum_probs=63.0
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhcccCcCCch
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~ 102 (699)
..|||+||||+++++.++||+|||+|+++||||++++..+.|++|++||++|+||.+|+.||++|.+
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 5699999999999999999999999999999999988889999999999999999999999999963
No 20
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.70 E-value=1.2e-17 Score=141.10 Aligned_cols=69 Identities=26% Similarity=0.475 Sum_probs=64.7
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhcccCcCCchhh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~ 104 (699)
+.|||+||||+++++.++||+|||+|+++||||+++ .+.+.|+.|++||++|+||.+|+.||++|.++.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 469999999999999999999999999999999876 578899999999999999999999999998764
No 21
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=7e-17 Score=147.87 Aligned_cols=110 Identities=19% Similarity=0.357 Sum_probs=95.8
Q ss_pred ceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
+.|..||.++|+..+ .++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+++.. +|++++ |
T Consensus 17 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~------v 87 (130)
T 2dml_A 17 DDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQS---LGGQYG------V 87 (130)
T ss_dssp SSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHH---HHHHHT------C
T ss_pred CCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHH---HHHHcC------C
Confidence 357899999999866 778999999999999999999999999999998878999999996655 899998 6
Q ss_pred ccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCC
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP 257 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP 257 (699)
+++||+++|.+|... ...|.|.++.+.|.+|+.+.+...|
T Consensus 88 ~~~Pt~~~~~~~~~~---~~~~~G~~~~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 88 QGFPTIKIFGANKNK---PEDYQGGRTGEAIVDAALSALRSGP 127 (130)
T ss_dssp CSSSEEEEESSCTTS---CEECCSCCSHHHHHHHHHHHHHHSS
T ss_pred CccCEEEEEeCCCCe---EEEeecCCCHHHHHHHHHHHHhcCC
Confidence 799999999988642 4678999999999999998754333
No 22
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.67 E-value=1.9e-17 Score=144.79 Aligned_cols=70 Identities=30% Similarity=0.572 Sum_probs=66.3
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhcccCcCCchhhh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~~ 105 (699)
..|||+||||+++++.++||+|||+|+++||||+++...++|++|++||++|+||.+|+.||++|.++..
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 4699999999999999999999999999999999988889999999999999999999999999987643
No 23
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=2.8e-17 Score=139.23 Aligned_cols=69 Identities=28% Similarity=0.492 Sum_probs=64.4
Q ss_pred CccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhcccCcCCchh
Q 005374 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (699)
Q Consensus 35 ~~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~ 103 (699)
...|||+||||+++++.++||+|||+|+++||||+++ ++.+.|++|++||++|+||.+|+.||++|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3679999999999999999999999999999999986 56788999999999999999999999999765
No 24
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=4.2e-17 Score=138.44 Aligned_cols=68 Identities=26% Similarity=0.539 Sum_probs=63.5
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhhcccCcCCchh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~---~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~ 103 (699)
..|||+||||+++++.++||+|||+|+++||||+++ .+.+.|++|++||++|+||.+|+.||.+|..+
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 579999999999999999999999999999999876 35788999999999999999999999999764
No 25
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=6.9e-17 Score=138.11 Aligned_cols=68 Identities=29% Similarity=0.512 Sum_probs=63.2
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhhcccCcCCchh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~----~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~ 103 (699)
..|||+||||+++++.++||+|||+|+++||||+++. +.+.|++|++||++|+||.+|+.||.+|..+
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 5799999999999999999999999999999999874 3567999999999999999999999999765
No 26
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.65 E-value=3.4e-17 Score=146.50 Aligned_cols=99 Identities=15% Similarity=0.246 Sum_probs=83.3
Q ss_pred EEec-CCCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 139 NVVT-SEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 139 ~~Lt-~~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
..++ .++|++.+. .+++++|.||||||++|+.+.|.|+++++.+.+ +.+++|||++++. ||++++ |+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~~~~---l~~~~~------V~ 72 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDECED---IAQDNQ------IA 72 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTTCHH---HHHHTT------CC
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecccCHH---HHHHcC------CC
Confidence 4454 468998883 578999999999999999999999999998865 4799999996655 999998 77
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
++||+++|++|.. ...+.| .+.+.|.+|+.++
T Consensus 73 ~~PT~~~~~~G~~----v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 73 CMPTFLFMKNGQK----LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp BSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred eecEEEEEECCEE----EEEEeC-cCHHHHHHHHHhc
Confidence 9999999999864 356678 6899999999875
No 27
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.65 E-value=5e-17 Score=140.95 Aligned_cols=68 Identities=29% Similarity=0.574 Sum_probs=63.9
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhcccCcCCchh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~ 103 (699)
..|||+||||+++++.++||+|||+|+++||||+++ .+.+.|++|++||++|+||.+|+.||.+|..+
T Consensus 16 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 16 DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 679999999999999999999999999999999886 57788999999999999999999999998754
No 28
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=7.5e-17 Score=139.84 Aligned_cols=69 Identities=32% Similarity=0.512 Sum_probs=64.4
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC--hHHHHHHHHHHHHHcCChhhhcccCcCCchhh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP--STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~ 104 (699)
..|||+||||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||.+|..+.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 5799999999999999999999999999999999873 57789999999999999999999999998764
No 29
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=1.7e-16 Score=145.56 Aligned_cols=107 Identities=17% Similarity=0.317 Sum_probs=94.2
Q ss_pred cceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhh----cccceeeeeccchhhhhHHHHhCCCC
Q 005374 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIG 209 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~----g~~~va~Vdc~~~~~~~~L~~k~~i~ 209 (699)
.+.|..||.++|+..+ .+++++||.||++||++|+.+.|.|+++++.+. +.+.++.|||++++. +|++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~-- 80 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQV---LASRYG-- 80 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCH---HHHHHT--
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHH---HHHhCC--
Confidence 3457999999999877 678999999999999999999999999999997 667999999996655 999998
Q ss_pred cccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhc
Q 005374 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (699)
Q Consensus 210 ~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~ 254 (699)
|+++||+++|.+|.. ...|.|.++.+.|.+|+.+.+.
T Consensus 81 ----v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 81 ----IRGFPTIKIFQKGES----PVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp ----CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHHHH
T ss_pred ----CCeeCeEEEEeCCCc----eEEecCCCCHHHHHHHHHHHhh
Confidence 669999999998753 4678999999999999998743
No 30
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.62 E-value=4.8e-16 Score=140.27 Aligned_cols=103 Identities=19% Similarity=0.385 Sum_probs=89.3
Q ss_pred ceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc-----ccceeeeeccchhhhhHHHHhCCCC
Q 005374 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-----IANTGMVELGDIRLATHLAERKPIG 209 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g-----~~~va~Vdc~~~~~~~~L~~k~~i~ 209 (699)
+.|..|+.++|+..+ .++++++|.|||+||++|+.+.|.|+++++.+.+ .+.++.|||+++. +++ +
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~--~-- 78 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND----VPD--E-- 78 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----CSS--C--
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----ccc--c--
Confidence 357899999999987 6889999999999999999999999999999987 5689999999654 454 5
Q ss_pred cccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 210 ~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|... ....|.|.++.+.|.+|+.+.
T Consensus 79 ----v~~~Pt~~~~~~~~~~--~~~~~~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 ----IQGFPTIKLYPAGAKG--QPVTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp ----CSSSSEEEEECSSCTT--SCCCCCCCSCHHHHHHHHHHT
T ss_pred ----cCcCCeEEEEeCcCCC--CceEecCCCCHHHHHHHHHhc
Confidence 7799999999988541 146789999999999999887
No 31
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.62 E-value=2.4e-16 Score=141.09 Aligned_cols=101 Identities=9% Similarity=0.065 Sum_probs=90.9
Q ss_pred EEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccc
Q 005374 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gy 217 (699)
|..||.++|++.+ ++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |+++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~~~ 72 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQE---TAGKYG------VMSI 72 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCS---HHHHTT------CCSB
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH---HHHHcC------CCcc
Confidence 5789999999999 88999999999999999999999999999998778999999997655 899998 6699
Q ss_pred cEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 73 PTLLVLKDGEV----VETSVGFKPKEALQELVNKH 103 (112)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred cEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 99999987753 35689999999999999887
No 32
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.62 E-value=2.8e-16 Score=145.74 Aligned_cols=104 Identities=16% Similarity=0.309 Sum_probs=93.1
Q ss_pred ceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc---cceeeeeccchhhhhHHHHhCCCCccc
Q 005374 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~---~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
+.|..|+.++|+..+.+++++||.||++||++|+++.|.|+++++.+.+. +.++.|||+++.. +|++++
T Consensus 17 ~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~----- 88 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASM---LASKFD----- 88 (140)
T ss_dssp TTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHH---HHHHTT-----
T ss_pred CCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHH---HHHHCC-----
Confidence 35899999999998888899999999999999999999999999999875 6899999996654 999998
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|+++||+++|.+|. ...|.|.++.+.|.+|+.+.+
T Consensus 89 -v~~~Pt~~~~~~G~-----~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 89 -VSGYPTIKILKKGQ-----AVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp -CCSSSEEEEEETTE-----EEECCSCCCHHHHHHHHHHHH
T ss_pred -CCccCeEEEEECCc-----EEEcCCCCCHHHHHHHHHHhc
Confidence 66999999998875 357899999999999999884
No 33
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.62 E-value=9.9e-17 Score=142.20 Aligned_cols=103 Identities=16% Similarity=0.301 Sum_probs=92.8
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
.|..||.++|+..+ .++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |+
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~ 75 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKT---LFQRFS------LK 75 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH---HHHHTT------CC
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChh---HHHhcC------CC
Confidence 46889999999999 788999999999999999999999999999998878999999996655 999998 66
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
++||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 76 ~~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 76 GVPQILYFKDGEY----KGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp SSCEEEEEETTEE----EEEEESSCCHHHHHHHHHHH
T ss_pred cCCEEEEEECCEE----EEEEeccCCHHHHHHHHHHH
Confidence 9999999988853 35789999999999999876
No 34
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.62 E-value=1.2e-16 Score=141.64 Aligned_cols=68 Identities=26% Similarity=0.510 Sum_probs=62.1
Q ss_pred cCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhhcccCcCCchhh
Q 005374 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (699)
Q Consensus 37 ~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~----~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~ 104 (699)
.|||+||||+++|+.++||+|||+|+++||||+++. +.+.|++|++||++|+||.+|+.||.+|.++.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~ 73 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 489999999999999999999999999999999874 46789999999999999999999999987664
No 35
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.62 E-value=9.6e-17 Score=142.07 Aligned_cols=104 Identities=16% Similarity=0.271 Sum_probs=90.6
Q ss_pred cceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc---ccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g---~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
.+.|..||.++|++.+. +++++|.||++||++|+.+.|.|+++++.+.. .+.++.|||++++. +|++++
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~---- 75 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN---ICSKYS---- 75 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH---HHHHTT----
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh---HHHhcC----
Confidence 44679999999999987 77999999999999999999999999998753 45899999996555 999998
Q ss_pred cccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|.. ...|.|.++.+.|.+|+.++
T Consensus 76 --v~~~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 76 --VRGYPTLLLFRGGKK----VSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp --CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHH
T ss_pred --CCcccEEEEEeCCcE----EEeccCCcCHHHHHHHHHhc
Confidence 669999999988854 36789999999999999875
No 36
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.62 E-value=1.6e-16 Score=141.79 Aligned_cols=69 Identities=28% Similarity=0.521 Sum_probs=64.0
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhhcccCcCCchhh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~---~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~ 104 (699)
..|||+||||+++++.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|.++.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 369999999999999999999999999999999876 357889999999999999999999999998764
No 37
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.62 E-value=1.1e-13 Score=148.99 Aligned_cols=321 Identities=13% Similarity=0.193 Sum_probs=209.4
Q ss_pred eEEEecC-CCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 137 AFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 137 ~V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
.|..|+. +++++.+..+.+++|-||.+-+..+ ...|.++|..+ ..+.|+.++- .. +|++++ |.
T Consensus 18 ~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t~~---~~---v~~~~~------v~ 81 (361)
T 3uem_A 18 FATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGITSN---SD---VFSKYQ------LD 81 (361)
T ss_dssp SSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEECC---HH---HHHHTT------CS
T ss_pred cceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEECc---HH---HHHHhC------CC
Confidence 4566744 7788888888999999998766544 57999999998 4456764442 24 899998 55
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEE-cCCC---CC
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFF-SKTG---ER 291 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~ 291 (699)
+ |+|++|++... ....|+|+.+.++|.+|+... ..|.+..++.++ ...++... .++.+++| ...+ ..
T Consensus 82 ~-~~i~lfk~f~~---~~~~~~g~~~~~~i~~fi~~~--~~p~v~~~~~~~-~~~~~~~~--~~~~~v~F~~~~~~~~~~ 152 (361)
T 3uem_A 82 K-DGVVLFKKFDE---GRNNFEGEVTKENLLDFIKHN--QLPLVIEFTEQT-APKIFGGE--IKTHILLFLPKSVSDYDG 152 (361)
T ss_dssp S-SEEEEEESSTT---SEEECCSCCCHHHHHHHHHHH--SSCSEEECSTTT-HHHHHSCS--CCEEEEEECCSSSSSHHH
T ss_pred C-CeEEEEEecCC---CccccCCcCCHHHHHHHHHHc--CCCcceecCccc-HHHHhcCC--CCcEEEEEEeCCchhHHH
Confidence 7 99999986322 247899999999999999988 577776677655 45555432 22434444 3322 22
Q ss_pred chHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCC--CCEEEEEcCCCCCceeec---CCCChhHHHHHHHHhhcc
Q 005374 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--APAIVFLKDPGVKPVVYY---GSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 292 ~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~--~PtIvlfk~~~~~pv~y~---g~~~~~~L~~fi~~~~~~ 366 (699)
..+.++.+|..|++.+.|+.|.....+...+++.|||.. +|+++++..++ ....|. |.++.+.|.+|++...-.
T Consensus 153 ~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g 231 (361)
T 3uem_A 153 KLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEG 231 (361)
T ss_dssp HHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcC
Confidence 456778899999999999998754323578999999987 99999998743 233453 788999999999875332
Q ss_pred cc--ccCCc------cccccccccchhhhhhccCcCCCCCCCCCccceEEEEEeccCChhHHHHHHHHHHHHHhhccCcc
Q 005374 367 GL--YFCGT------CVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDE 438 (699)
Q Consensus 367 ~~--~~~~~------~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~~~~~~~~~~~~~lr~~a~~l~~~~~ 438 (699)
.. ..... .-..+..|+..+..+..-.. ++ ..+|.+...--..-..+...+.++++
T Consensus 232 ~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~------~k----~~lv~f~a~wC~~C~~~~p~~~~la~------- 294 (361)
T 3uem_A 232 KIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDE------KK----NVFVEFYAPWCGHCKQLAPIWDKLGE------- 294 (361)
T ss_dssp CSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCT------TC----EEEEEEECTTCHHHHHHHHHHHHHHH-------
T ss_pred CCcccccCCCCCcccccCCcEEeecCchhhhcccC------CC----cEEEEEecCcCHhHHHHHHHHHHHHH-------
Confidence 10 00111 11135566666665544221 22 33444443333444566667777777
Q ss_pred cccccccccchhHHHhcCCC-eEEEEEEeCcchHHHHHHhccccccccccCCcCCCCCCCeEEEEEeecCCccccceeec
Q 005374 439 SNAADTDQSLAPAAVAFRNK-RLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKIER 517 (699)
Q Consensus 439 ~~~~~~~~~~~~~a~~~k~~-~l~F~wvd~~~q~~f~~~fl~~~~~~~~c~~~~~~~~~p~lvI~~~rr~~~~~~~~~~~ 517 (699)
.|++. .+.|++||...+. +. +......|.++++ +.... ..
T Consensus 295 ---------------~~~~~~~v~~~~vd~~~~~--~~--------------~~~v~~~Pt~~~~----~~~~~-~~--- 335 (361)
T 3uem_A 295 ---------------TYKDHENIVIAKMDSTANE--VE--------------AVKVHSFPTLKFF----PASAD-RT--- 335 (361)
T ss_dssp ---------------HTTTCSSEEEEEEETTTCB--CS--------------SCCCCSSSEEEEE----CSSSS-CC---
T ss_pred ---------------HhccCCcEEEEEEECCccc--hh--------------hcCCcccCeEEEE----ECCCC-cc---
Confidence 66653 6999999997543 11 1245566999987 33210 00
Q ss_pred cccccccccccccCCccccchhccCCCCChHHHHHHHHHHhc
Q 005374 518 KPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQ 559 (699)
Q Consensus 518 ~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ 559 (699)
...|.|..+.++|.+||++--+
T Consensus 336 --------------------~~~~~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 336 --------------------VIDYNGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp --------------------CEECCSCSSHHHHHHHHTTTSC
T ss_pred --------------------eeEecCCCCHHHHHHHHHhcCC
Confidence 1246777788889888876544
No 38
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.62 E-value=3.1e-16 Score=141.41 Aligned_cols=70 Identities=26% Similarity=0.433 Sum_probs=65.1
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC---hHHHHHHHHHHHHHcCChhhhcccCcCCchhhh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~~ 105 (699)
..|||+||||+++|+.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 6799999999999999999999999999999999874 467899999999999999999999999987753
No 39
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.61 E-value=4.3e-16 Score=152.26 Aligned_cols=108 Identities=15% Similarity=0.307 Sum_probs=91.5
Q ss_pred eEEEecCCCCccccc--CCCcEEEEEec-------cCCCCCCCcchHHHHHHHHhh-----cccceeeeeccchhhhhHH
Q 005374 137 AFNVVTSEDFPSIFH--DSKPWLIQVYS-------DGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHL 202 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~--~~~~~lV~FYa-------pwC~hCk~l~p~~~~~A~~L~-----g~~~va~Vdc~~~~~~~~L 202 (699)
.|+.||.+||+++|. .+.++||.|+| +||++|+.++|+|+++|+++. +.+.|++||+++++. +
T Consensus 19 ~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~---l 95 (178)
T 3ga4_A 19 GVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQ---L 95 (178)
T ss_dssp SEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHH---H
T ss_pred CCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHH---H
Confidence 479999999999884 35689999999 499999999999999999998 777999999997766 9
Q ss_pred HHhCCCCcccccccccEEEEcCCCCCCC--------Cccccc---cC-CcCHHHHHHHHHHHh
Q 005374 203 AERKPIGQIFFRRGLPSLVAFPPGCKSS--------DCMTRF---EG-ELSVDAVTDWFATAI 253 (699)
Q Consensus 203 ~~k~~i~~~f~V~gyPTl~~f~~g~~~~--------~~~~~Y---~G-~rs~~~Iv~fi~k~v 253 (699)
|++++ |+++|||++|++|.... .....| .| .++++.|.+|+.+++
T Consensus 96 a~~~~------I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t 152 (178)
T 3ga4_A 96 VKDLK------LQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKIL 152 (178)
T ss_dssp HHHTT------CCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHH
T ss_pred HHHcC------CCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhc
Confidence 99999 77999999999996531 012345 35 899999999999883
No 40
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=3.7e-16 Score=143.56 Aligned_cols=107 Identities=17% Similarity=0.282 Sum_probs=91.2
Q ss_pred cceEEEecCCCCccccc-CCCcEEEEEeccCCCCCCCcchHHHHHHHHhh--cccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 135 VHAFNVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~-~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~--g~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
.+.|..|+.++|+..+. +++++||.||++||++|+.+.|.|+++++.+. +.+.++.|||+++.. +|++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~---- 78 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDI---TNDQYK---- 78 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCC---CCSSCC----
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHH---HHhhcC----
Confidence 34679999999999984 68999999999999999999999999999997 456899999996654 777777
Q ss_pred cccccccEEEEcCCCCCCCCcccccc-CCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFE-GELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~-G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|... ....|. |.++.+.|.+|+.+.
T Consensus 79 --v~~~Pt~~~~~~g~~~--~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 79 --VEGFPTIYFAPSGDKK--NPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp --CSSSSEEEEECTTCTT--SCEECCSSCCSTTHHHHHHHHH
T ss_pred --CCcCCEEEEEeCCCcc--cceEecCCCcCHHHHHHHHHHh
Confidence 7799999999987643 234577 669999999999988
No 41
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.61 E-value=4.1e-16 Score=139.53 Aligned_cols=105 Identities=17% Similarity=0.294 Sum_probs=91.7
Q ss_pred eEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc---ccceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g---~~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
.|..+|.++|+..+.++++++|.||++||++|+++.|.|+++++.+.+ .+.++.|||+++.. +|++++
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~------ 78 (120)
T 1mek_A 8 HVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESD---LAQQYG------ 78 (120)
T ss_dssp TEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCS---SHHHHT------
T ss_pred CcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHH---HHHHCC------
Confidence 578999999998888889999999999999999999999999999874 45899999996654 888988
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|... .+..|.|.++.+.|.+|+.+.
T Consensus 79 v~~~Pt~~~~~~g~~~--~~~~~~g~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 79 VRGYPTIKFFRNGDTA--SPKEYTAGREADDIVNWLKKR 115 (120)
T ss_dssp CCSSSEEEEEESSCSS--SCEECCCCSSHHHHHHHHHTT
T ss_pred CCcccEEEEEeCCCcC--CcccccCccCHHHHHHHHHhc
Confidence 6699999999888632 236789999999999999876
No 42
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.8e-16 Score=143.67 Aligned_cols=69 Identities=25% Similarity=0.323 Sum_probs=64.0
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhhcccCcCCchhh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~---~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~ 104 (699)
..|||+||||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|..+.
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 579999999999999999999999999999999876 357889999999999999999999999987653
No 43
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.60 E-value=3.9e-16 Score=137.81 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=91.1
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
.|..||.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++++. +|++++ |.
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~ 73 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG---TAPKYG------IR 73 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTT---HHHHTT------CC
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH---HHHHcC------Cc
Confidence 47899999999766 688999999999999999999999999999998778999999996655 899998 66
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
++||+++|++|.. ...+.|.++.+.|.+|+.+.
T Consensus 74 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 74 GIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ccCEEEEEeCCEE----EEEEecCCCHHHHHHHHHHh
Confidence 9999999987753 35678999999999999876
No 44
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.60 E-value=2.3e-16 Score=138.91 Aligned_cols=103 Identities=17% Similarity=0.314 Sum_probs=92.7
Q ss_pred eEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
.|..+|.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |++
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------i~~ 75 (109)
T 3tco_A 5 VTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQK---IADKYS------VLN 75 (109)
T ss_dssp CCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH---HHHHTT------CCS
T ss_pred eEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHH---HHHhcC------ccc
Confidence 46889999999999889999999999999999999999999999998888999999996655 999998 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 76 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 76 IPTTLIFVNGQL----VDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcE----EEeeeccCCHHHHHHHHHHH
Confidence 999999988854 35689999999999999876
No 45
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.60 E-value=3.1e-16 Score=137.60 Aligned_cols=102 Identities=20% Similarity=0.270 Sum_probs=91.2
Q ss_pred eEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
.|..+|.++|++.+ ++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 73 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPS---TAAKYE------VMS 73 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CCS
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHH---HHHhCC------Ccc
Confidence 36889999999999 88999999999999999999999999999998878999999996655 899998 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 74 ~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 74 IPTLIVFKDGQP----VDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp BSEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred cCEEEEEeCCeE----EEEEeCCCCHHHHHHHHHHh
Confidence 999999988854 35789999999999999764
No 46
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1.9e-16 Score=138.35 Aligned_cols=69 Identities=29% Similarity=0.518 Sum_probs=63.7
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhhcccCcCCchhh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~----~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~~ 104 (699)
..|||+||||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||++|..+.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 5699999999999999999999999999999999874 46789999999999999999999999987664
No 47
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.60 E-value=5.6e-16 Score=145.71 Aligned_cols=105 Identities=17% Similarity=0.296 Sum_probs=94.8
Q ss_pred eEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
.|..++.++|+..+..+++++|.||++||++|+.+.|.|+++++.+.+.+.++.||+++++. ++++|+ |.+
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~------v~~ 109 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPA---LSTRFR------IRS 109 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CCS
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHH---HHHHCC------CCc
Confidence 57999999999999889999999999999999999999999999998888999999996655 899998 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhc
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~ 254 (699)
+||+++|.+|.. ...|.|.++.+.|.+|+.+.+.
T Consensus 110 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 110 IPTIMLYRNGKM----IDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp SSEEEEEETTEE----EEEESSCCCHHHHHHHHHHHHH
T ss_pred cCEEEEEECCeE----EEEEeCCCCHHHHHHHHHHHhc
Confidence 999999988854 3578999999999999998854
No 48
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.59 E-value=1.3e-15 Score=158.80 Aligned_cols=106 Identities=19% Similarity=0.331 Sum_probs=94.4
Q ss_pred eEEEecCCCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
.|..+|.++|+..+. .+++++|.||+|||++|+.+.|.|+++++++.+.+.|++|||++++. +|++|+ |
T Consensus 8 ~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v 78 (287)
T 3qou_A 8 NIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQM---IAAQFG------L 78 (287)
T ss_dssp TEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHH---HHHTTT------C
T ss_pred ccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHH---HHHHcC------C
Confidence 478999999999885 38999999999999999999999999999999888999999996655 999998 6
Q ss_pred ccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCCc
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPR 258 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP~ 258 (699)
+++||+++|.+|.. ...|.|.++.+.+..|+... +|.
T Consensus 79 ~~~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~---lp~ 115 (287)
T 3qou_A 79 RAIPTVYLFQNGQP----VDGFQGPQPEEAIRALLDXV---LPR 115 (287)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH---SCC
T ss_pred CCCCeEEEEECCEE----EEEeeCCCCHHHHHHHHHHH---cCC
Confidence 79999999988853 35689999999999999988 564
No 49
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.59 E-value=6.6e-16 Score=135.69 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=90.9
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
.|..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++++. +|++++ |.
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~ 73 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPE---TPNAYQ------VR 73 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCH---HHHHTT------CC
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHH---HHHhcC------CC
Confidence 47899999999777 688999999999999999999999999999998778999999996655 899998 66
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 74 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 74 SIPTLMLVRDGKV----IDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHT
T ss_pred ccCEEEEEeCCEE----EEEecCCCCHHHHHHHHHhc
Confidence 9999999987753 35688999999999999764
No 50
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.59 E-value=7.2e-16 Score=137.19 Aligned_cols=104 Identities=16% Similarity=0.187 Sum_probs=91.5
Q ss_pred ceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
+.|..+|.++|...+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.+..|||++++. +|++++ |
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v 75 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG---TAAKYG------V 75 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------C
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH---HHHhCC------C
Confidence 357899999998766 678999999999999999999999999999998778999999996655 899998 6
Q ss_pred ccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.++||+++|.+|.. ...|.|..+.+.|.+|+.+.
T Consensus 76 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 76 MSIPTLNVYQGGEV----AKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHTHHH
T ss_pred CcccEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 69999999988853 35678999999999999876
No 51
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.59 E-value=1e-15 Score=136.26 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=91.7
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
.|..|+.++|+..+ .++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |.
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~---~~~~~~------v~ 78 (115)
T 1thx_A 8 GVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT---TVKKYK------VE 78 (115)
T ss_dssp SEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH---HHHHTT------CC
T ss_pred ceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH---HHHHcC------CC
Confidence 57999999999876 688999999999999999999999999999998778999999996654 899998 66
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 79 ~~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 79 GVPALRLVKGEQI----LDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ceeEEEEEcCCEE----EEEecCCCCHHHHHHHHHHH
Confidence 9999999987753 34688999999999999887
No 52
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.59 E-value=3.6e-16 Score=137.33 Aligned_cols=102 Identities=12% Similarity=0.186 Sum_probs=89.4
Q ss_pred EEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccc
Q 005374 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gy 217 (699)
|..||.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |+++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~---~~~~~~------v~~~ 72 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPE---TTSQFG------IMSI 72 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHH---HHHHTT------CCSS
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHH---HHHHcC------Cccc
Confidence 5789999999777888999999999999999999999999999998778999999996655 899998 6699
Q ss_pred cEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
||+++|.+|.. ...|.|..+.+.|.+|+.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 73 PTLILFKGGRP----VKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHTTTT
T ss_pred cEEEEEeCCeE----EEEEecCCCHHHHHHHHHHH
Confidence 99999987753 35678999999999988654
No 53
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.58 E-value=3.4e-16 Score=141.65 Aligned_cols=108 Identities=14% Similarity=0.251 Sum_probs=91.6
Q ss_pred ceEEEecCCCCccc-ccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 136 HAFNVVTSEDFPSI-FHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~-v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
+.|..||.++|... ++++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v 73 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ---TCQKAG------I 73 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH---HHHHTT------C
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHH---HHHHcC------C
Confidence 35788999999654 4788999999999999999999999999999998878999999996654 999998 6
Q ss_pred ccccEEEEcCCCCCCCCccccccCC----cCHHHHHHHHHHHhccC
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATAILKL 256 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~----rs~~~Iv~fi~k~v~~l 256 (699)
+++||+++|.+|.. ...+.|. ++.+.|.+|+.+.+...
T Consensus 74 ~~~Pt~~~~~~~~~----~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 74 KAYPSVKLYQYERA----KKSIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp CSSSEEEEEEEEGG----GTEEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred CccceEEEEeCCCc----cceeeccccCcCCHHHHHHHHHHHHHhh
Confidence 69999999977653 2456665 89999999999885433
No 54
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=7.7e-16 Score=136.42 Aligned_cols=67 Identities=24% Similarity=0.377 Sum_probs=61.5
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC---hHHHHHHHHHHHHHcCChhhhcccCcCCch
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGID 102 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~ 102 (699)
..|||+||||+++|+.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||++...
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 6799999999999999999999999999999999863 577899999999999999999999985433
No 55
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.58 E-value=4.8e-16 Score=135.25 Aligned_cols=101 Identities=13% Similarity=0.176 Sum_probs=90.3
Q ss_pred EEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccc
Q 005374 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gy 217 (699)
|..||.++|++.+.++++++|.||++||++|+.+.|.++++++.+.+ +.++.|||++++. +|++++ |+++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~---~~~~~~------v~~~ 70 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPD---IAARYG------VMSL 70 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH---HHHHTT------CCSS
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHH---HHHhCC------cccc
Confidence 56899999999998889999999999999999999999999999988 8999999996654 899998 6699
Q ss_pred cEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 71 Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 71 PTVIFFKDGEP----VDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp CEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE----hhhccCCCCHHHHHHHHHHH
Confidence 99999987753 35688999999999999876
No 56
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.58 E-value=7e-16 Score=142.18 Aligned_cols=106 Identities=15% Similarity=0.201 Sum_probs=91.8
Q ss_pred CcceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 134 SVHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 134 ~~~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
+.+.|..||.++|+..+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++
T Consensus 20 m~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~---l~~~~~----- 91 (128)
T 2o8v_B 20 HSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPG---TAPKYG----- 91 (128)
T ss_dssp -CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCT---TSGGGT-----
T ss_pred cccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH---HHHHcC-----
Confidence 33457899999999766 788999999999999999999999999999998778999999996655 888888
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 92 -v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 92 -IRGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp -CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred -CCccCEEEEEeCCEE----EEEEcCCCCHHHHHHHHHHh
Confidence 679999999987753 35688999999999999875
No 57
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.58 E-value=1.3e-13 Score=139.43 Aligned_cols=204 Identities=20% Similarity=0.312 Sum_probs=148.5
Q ss_pred cccchhhhhhhhhcCCCcEEEE-EEcCCCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCC
Q 005374 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP 340 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl-~f~~~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~ 340 (699)
+++.+.++.|+... .+.|+ ||.+.++...+.+..+|..+ +.+.||.+. .++++++|+++. |+|++|+.+
T Consensus 14 l~s~~~~~~~l~~~---~v~vVgff~~~~~~~~~~f~~~A~~l-~~~~F~~t~-----~~~v~~~~~v~~-p~i~lfk~~ 83 (227)
T 4f9z_D 14 LTDVPAAMEFIAAT---EVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIST-----DSEVLTHYNITG-NTICLFRLV 83 (227)
T ss_dssp CCSHHHHHHHHHTS---SEEEEEECSCSCSTHHHHHHHHTTTC-TTSEEEEEC-----CHHHHHHTTCCS-SEEEEEETT
T ss_pred eCCHHHHHHHHhcC---CeEEEEEecCCCchhHHHHHHHHHhC-CCceEEEEC-----CHHHHHHcCCCC-CeEEEEEec
Confidence 55555578888743 35454 56655566778888899988 489999863 467999999986 999999987
Q ss_pred CCCceeecC----CCChhHHHHHHHHhhccccccCCccccccccccchhhhhhccCcCCCCCCCCCccceEEEEEec-cC
Q 005374 341 GVKPVVYYG----SFNNSRLSEVMEQNKLQGLYFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAG-RL 415 (699)
Q Consensus 341 ~~~pv~y~g----~~~~~~L~~fi~~~~~~~~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~-~~ 415 (699)
+.++..|.| .++.+.|.+||+.+.+| .++++|..+.....- .+. .++++++. ..
T Consensus 84 ~~~~~~~~~~~~g~~~~~~l~~fi~~~~~p----------lv~e~t~~n~~~~~~-------~~~----~~~~l~f~~~~ 142 (227)
T 4f9z_D 84 DNEQLNLEDEDIESIDATKLSRFIEINSLH----------MVTEYNPVTVIGLFN-------SVI----QIHLLLIMNKA 142 (227)
T ss_dssp TTEEEEECHHHHHTCCHHHHHHHHHHHCCC----------SEEECCHHHHHHHHH-------SSC----CEEEEEEECTT
T ss_pred CcccccccccccCCCCHHHHHHHHHHhCCC----------ceeecCcccHHHHhc-------cCC----ceEEEEEEcCC
Confidence 777778874 78999999999999999 899998887654321 111 45655553 34
Q ss_pred ChhHHHHHHHHHHHHHhhccCcccccccccccchhHHHhcCCCeEEEEEEeCc--chHHHHHHhccccccccccCCcCCC
Q 005374 416 SPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGE--AQDRYCSFYLFSETSFETCGARRDM 493 (699)
Q Consensus 416 ~~~~~~~~~~lr~~a~~l~~~~~~~~~~~~~~~~~~a~~~k~~~l~F~wvd~~--~q~~f~~~fl~~~~~~~~c~~~~~~ 493 (699)
..+.++++..++++|+ +|+++ +.|+|+|++ .....++.|-...
T Consensus 143 ~~~~~~~~~~~~~vAk----------------------~~k~~-i~F~~vd~~~~~~~~~l~~fgl~~------------ 187 (227)
T 4f9z_D 143 SPEYEENMHRYQKAAK----------------------LFQGK-ILFILVDSGMKENGKVISFFKLKE------------ 187 (227)
T ss_dssp STTHHHHHHHHHHHHH----------------------HTTTT-CEEEEEETTSGGGHHHHHHTTCCG------------
T ss_pred cchHHHHHHHHHHHHH----------------------HhhCC-EEEEEeCCccHhHHHHHHHcCCCc------------
Confidence 4567788898988888 88876 999999995 4567888773221
Q ss_pred CCCCeEEEEEeecCCccccceeeccccccccccccccCCccccchhccCCCCChHHHHHHHHHHhc
Q 005374 494 SDVPRLFIVRYKRNTTEDEAKIERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQ 559 (699)
Q Consensus 494 ~~~p~lvI~~~rr~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ 559 (699)
.+.|.|+|+ +.... .+|. + +.+ .-+.+.|..||++++.
T Consensus 188 ~~~P~~~i~----~~~~~-~ky~------~---~~~--------------~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 188 SQLPALAIY----QTLDD-EWDT------L---PTA--------------EVSVEHVQNFCDGFLS 225 (227)
T ss_dssp GGCSEEEEE----ESSSC-CEEE------E---TTC--------------CCCHHHHHHHHHHHHT
T ss_pred ccCCEEEEE----ECCCC-cccc------C---CcC--------------CCCHHHHHHHHHHHhC
Confidence 123999988 54431 4666 3 222 2266899999999997
No 58
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.58 E-value=5.9e-16 Score=144.57 Aligned_cols=104 Identities=14% Similarity=0.193 Sum_probs=92.7
Q ss_pred eEEEecCCCCcc-cccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 137 AFNVVTSEDFPS-IFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 137 ~V~~Lt~~nF~~-~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
.|..||.++|.+ ++.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |+
T Consensus 7 ~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~ 77 (140)
T 3hz4_A 7 SIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPW---TAEKYG------VQ 77 (140)
T ss_dssp TEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHH---HHHHHT------CC
T ss_pred ceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHh---HHHHCC------CC
Confidence 579999999994 45789999999999999999999999999999999888999999996655 999998 66
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
++||+++|.+|.. ...|.|.++.+.|.+|+.+.+
T Consensus 78 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 78 GTPTFKFFCHGRP----VWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp EESEEEEEETTEE----EEEEESSCCHHHHHHHHHHHH
T ss_pred cCCEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHHh
Confidence 9999999988853 357899999999999998873
No 59
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.57 E-value=5.2e-16 Score=136.45 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=91.3
Q ss_pred eEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
.|..||.++|+..+.++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||+++.. +|++++ |.+
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 72 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPK---TAMRYR------VMS 72 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH---HHHHTT------CCS
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHh---HHHhCC------CCc
Confidence 46889999999777888999999999999999999999999999998778999999996655 899998 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+||+++|.+|.. ...|.|..+.+.|.+|+.+.
T Consensus 73 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 73 IPTVILFKDGQP----VEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred CCEEEEEeCCcE----eeeEeCCCCHHHHHHHHHHH
Confidence 999999987753 34688999999999999876
No 60
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.57 E-value=5.7e-16 Score=136.86 Aligned_cols=98 Identities=13% Similarity=0.145 Sum_probs=76.3
Q ss_pred ecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEE
Q 005374 141 VTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (699)
Q Consensus 141 Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl 220 (699)
.|.++|++.+.++++++|.||||||++|+.+.|.|+++++.+. .+.++.|||++++. +|++++ |+++||+
T Consensus 6 ~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~---l~~~~~------v~~~Pt~ 75 (105)
T 4euy_A 6 KTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQE---IAGRYA------VFTGPTV 75 (105)
T ss_dssp ----CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC------------------CCCCEE
T ss_pred CCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHH---HHHhcC------CCCCCEE
Confidence 3568899999889999999999999999999999999999884 46999999996665 889888 7799999
Q ss_pred EEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 221 VAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 221 ~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
++|.+|.. ...+.|..+.+.|.+++.+.
T Consensus 76 ~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 76 LLFYNGKE----ILRESRFISLENLERTIQLF 103 (105)
T ss_dssp EEEETTEE----EEEEESSCCHHHHHHHHHTT
T ss_pred EEEeCCeE----EEEEeCCcCHHHHHHHHHHh
Confidence 99998853 35678999999999999765
No 61
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=1.6e-15 Score=138.40 Aligned_cols=102 Identities=19% Similarity=0.383 Sum_probs=89.0
Q ss_pred cceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc-ccceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g-~~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
.+.|..||.++|++.++. .++|.|||+||++|+.+.|.|+++++.+.+ .+.++.|||+++.. +|++++
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~------ 74 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG---LSGRFI------ 74 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH---HHHHTT------
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH---HHHHcC------
Confidence 346899999999987754 399999999999999999999999999986 56999999996655 999998
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|. ...|.|.++.+.|.+|+.+.
T Consensus 75 v~~~Pt~~~~~~G~-----~~~~~G~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 75 INALPTIYHCKDGE-----FRRYQGPRTKKDFINFISDK 108 (126)
T ss_dssp CCSSSEEEEEETTE-----EEECCSCCCHHHHHHHHHTC
T ss_pred CcccCEEEEEeCCe-----EEEeecCCCHHHHHHHHHHH
Confidence 66999999998774 35789999999999999876
No 62
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.57 E-value=3.7e-16 Score=136.99 Aligned_cols=65 Identities=22% Similarity=0.463 Sum_probs=60.2
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC---------hHHHHHHHHHHHHHcCChhhhcccCcCC
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---------STADFLKIQYAYELLTDPLWKRNYDVYG 100 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~---------~~~~f~~I~~Ay~vL~d~~~R~~YD~~g 100 (699)
..|||+||||+++|+.++||+|||+|+++||||+++. +.+.|++|++||++|+||.+|+.||.+.
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 5799999999999999999999999999999999752 4577999999999999999999999765
No 63
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.57 E-value=1.6e-15 Score=140.93 Aligned_cols=104 Identities=15% Similarity=0.170 Sum_probs=90.3
Q ss_pred ceEEEecCCCCccccc------------CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHH
Q 005374 136 HAFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLA 203 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v~------------~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~ 203 (699)
..|..||..+|...+. .+++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|
T Consensus 22 ~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~ 98 (141)
T 3hxs_A 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPE---LA 98 (141)
T ss_dssp -CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HH
T ss_pred CCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHH---HH
Confidence 3578899999988773 47899999999999999999999999999999888999999996655 99
Q ss_pred HhCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 204 ERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 204 ~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
++|+ |.++||+++|..++. ...|.|.++.+.|.+|+.+.
T Consensus 99 ~~~~------v~~~Pt~~~~~~~g~----~~~~~G~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 99 RDFG------IQSIPTIWFVPMKGE----PQVNMGALSKEQLKGYIDKV 137 (141)
T ss_dssp HHTT------CCSSSEEEEECSSSC----CEEEESCCCHHHHHHHHHHT
T ss_pred HHcC------CCCcCEEEEEeCCCC----EEEEeCCCCHHHHHHHHHHH
Confidence 9998 669999999965543 24789999999999999876
No 64
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.57 E-value=5.2e-16 Score=145.57 Aligned_cols=103 Identities=9% Similarity=0.095 Sum_probs=93.0
Q ss_pred EEEecCCCCcccccCCCcEEEEEeccC--CCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapw--C~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
+..+|.++|++.|.++.++||.|||+| ||+|+.++|.++++|+++.|. ++|++||.++++. |+.+|+ |
T Consensus 19 ~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~---lA~~yg------V 89 (140)
T 2qgv_A 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEA---IGDRFG------A 89 (140)
T ss_dssp CEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHH---HHHHHT------C
T ss_pred CccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHH---HHHHcC------C
Confidence 468999999999988889999999999 999999999999999999998 9999999996665 999999 7
Q ss_pred ccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
+++|||++|++|... ....|..+.+.|.+|+.+.+
T Consensus 90 ~sIPTlilFk~G~~v----~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 90 FRFPATLVFTGGNYR----GVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp CSSSEEEEEETTEEE----EEEESCCCHHHHHHHHHHHH
T ss_pred ccCCEEEEEECCEEE----EEEecCCCHHHHHHHHHHHh
Confidence 799999999999743 56689999999999998874
No 65
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.56 E-value=2.1e-15 Score=139.96 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=91.8
Q ss_pred cceEEEecCCCCccccc------------CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHH
Q 005374 135 VHAFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHL 202 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~------------~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L 202 (699)
...|..||.++|.+.+. ++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+++.. +
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~---l 84 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQE---L 84 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---H
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHH---H
Confidence 34688999999988773 46899999999999999999999999999998778999999996654 8
Q ss_pred HHhCCCCcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHhc
Q 005374 203 AERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (699)
Q Consensus 203 ~~k~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~ 254 (699)
|++++ |+++||+++| .+|.. ..|.|.++.+.|.+|+.+.+.
T Consensus 85 ~~~~~------v~~~Pt~~~~~~~G~~-----~~~~G~~~~~~l~~~l~~~~~ 126 (136)
T 2l5l_A 85 AGAFG------IRSIPSILFIPMEGKP-----EMAQGAMPKASFKKAIDEFLL 126 (136)
T ss_dssp HHHTT------CCSSCEEEEECSSSCC-----EEEESCCCHHHHHHHHHHHHT
T ss_pred HHHcC------CCCCCEEEEECCCCcE-----EEEeCCCCHHHHHHHHHHHhh
Confidence 99998 6699999999 66642 368999999999999998843
No 66
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.56 E-value=1e-15 Score=146.07 Aligned_cols=104 Identities=16% Similarity=0.296 Sum_probs=93.0
Q ss_pred eEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
.+..++..+|++.+.++++++|.||++||++|+.+.|.|+++++.+.+.+.|++|||++++. ++++++ |++
T Consensus 48 ~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~---l~~~~~------i~~ 118 (155)
T 2ppt_A 48 KVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPA---VAGRHR------IQG 118 (155)
T ss_dssp SEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTH---HHHHTT------CCS
T ss_pred CCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHH---HHHHcC------CCc
Confidence 46889999999988888999999999999999999999999999998878999999996655 999998 679
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
+||+++|.+|.. ...|.|..+.+.|.+|+.+.+
T Consensus 119 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 119 IPAFILFHKGRE----LARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCeE----EEEecCCCCHHHHHHHHHHHh
Confidence 999999988753 356899999999999998873
No 67
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.56 E-value=5.4e-16 Score=139.81 Aligned_cols=68 Identities=26% Similarity=0.335 Sum_probs=63.0
Q ss_pred ccCcccccCcCCCC-CHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCChhhhcccCcCCchh
Q 005374 36 PPSHYDALGIKPYS-SVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (699)
Q Consensus 36 ~~d~Y~vLgv~~~a-s~~eIk~ayr~l~~~~HPDk~~~------~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~ 103 (699)
..|||+||||+++| +.++||+|||+|+++||||++++ +.+.|++|++||++|+||.+|+.||++|...
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~ 88 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHP 88 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCc
Confidence 67999999999999 99999999999999999998864 4678999999999999999999999988554
No 68
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.56 E-value=1.7e-15 Score=132.64 Aligned_cols=102 Identities=13% Similarity=0.198 Sum_probs=89.7
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
|..+|.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+.+.+..||+++++. +|++++ |++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 72 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG---IATQYN------IRS 72 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CCS
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHH---HHHhCC------CCc
Confidence 5789999999877 678999999999999999999999999999998778999999996654 899998 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+||+++|++|.. ...+.|..+.+.+.+++.+.
T Consensus 73 ~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 73 IPTVLFFKNGER----KESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp SSEEEEEETTEE----EEEEEECCCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEecCCCHHHHHHHHHhh
Confidence 999999988753 35678999999999999765
No 69
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.56 E-value=1.1e-15 Score=134.60 Aligned_cols=102 Identities=15% Similarity=0.207 Sum_probs=90.0
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
|..+|.++|++.+ .++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++++. +|++++ |.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 73 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN---VASEYG------IRS 73 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHHT------CCS
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH---HHHHCC------CCc
Confidence 5789999999877 678999999999999999999999999999998778999999996654 899988 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+||+++|.+|.. ...+.|..+.+.|.+++.+.
T Consensus 74 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 74 IPTIMVFKGGKK----CETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp SCEEEEESSSSE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999988854 35678999999999999875
No 70
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.56 E-value=3.9e-15 Score=153.17 Aligned_cols=105 Identities=11% Similarity=0.090 Sum_probs=89.6
Q ss_pred ceEEEecCCCCcccccCCCcEEEEEe--ccCCCCCCCcchHHHHHHHHhhc---ccceeeeeccc--hhhhhHHHHhCCC
Q 005374 136 HAFNVVTSEDFPSIFHDSKPWLIQVY--SDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGD--IRLATHLAERKPI 208 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FY--apwC~hCk~l~p~~~~~A~~L~g---~~~va~Vdc~~--~~~~~~L~~k~~i 208 (699)
+.|..||..||+.+++++.+|||.|| ||||+ ++|.|+++|+.+.+ .+.|++|||++ ......||++|+
T Consensus 16 ~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~- 90 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK- 90 (248)
T ss_dssp TTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT-
T ss_pred CCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC-
Confidence 35789999999997788899999999 99999 99999999999964 56999999996 111334999998
Q ss_pred Ccccccc--cccEEEEcCCCCCCCCccccc--cCCcCHHHHHHHHHHHh
Q 005374 209 GQIFFRR--GLPSLVAFPPGCKSSDCMTRF--EGELSVDAVTDWFATAI 253 (699)
Q Consensus 209 ~~~f~V~--gyPTl~~f~~g~~~~~~~~~Y--~G~rs~~~Iv~fi~k~v 253 (699)
|+ +||||++|+ |... .+..| .|.++.++|++|+.+.+
T Consensus 91 -----V~~~~~PTl~~F~-G~~~--~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 91 -----VDDKNFPSIFLFK-GNAD--EYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp -----CCTTSCCEEEEES-SSSS--SEEECCTTSCCCHHHHHHHHHHHS
T ss_pred -----CCcCCCCeEEEEe-CCcC--cceeecccCCCCHHHHHHHHHHhh
Confidence 88 999999999 8621 35788 99999999999999884
No 71
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.56 E-value=1.5e-15 Score=139.07 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=84.6
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEeccCCC--------------CCCCcchHHHHHHHHhhcccceeeeeccchhhhhH
Q 005374 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSY--------------LCGQFSGAWKTIAALLEGIANTGMVELGDIRLATH 201 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~--------------hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~ 201 (699)
.|..||.++|++.+ +++++++|.||||||+ +|+.+.|.|+++++.+.+.+.+++|||++++.
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~--- 80 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG--- 80 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTT---
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHH---
Confidence 57899999998665 7899999999999999 99999999999999998778999999997655
Q ss_pred HHHhCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 202 LAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 202 L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+|++++ |+++||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 81 l~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 81 TAPKYG------IRGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp TGGGGT------CCBSSEEEEEESSSE----EEEEESCCCHHHHHHHHTTT
T ss_pred HHHHcC------CCccCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 888888 679999999988753 35689999999999998764
No 72
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.55 E-value=1.3e-15 Score=142.29 Aligned_cols=103 Identities=12% Similarity=0.035 Sum_probs=91.6
Q ss_pred EEEecCCCCcccccC-CCcEEEEEeccCC--CCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 138 FNVVTSEDFPSIFHD-SKPWLIQVYSDGS--YLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~-~~~~lV~FYapwC--~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
...+|.+||++.|.+ ..++||.|||+|| |+|+.++|+.+++|+++.+.++|++||.++++. |+.+|+ |
T Consensus 17 ~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~---la~~yg------V 87 (137)
T 2qsi_A 17 PTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERG---LMARFG------V 87 (137)
T ss_dssp CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHH---HHHHHT------C
T ss_pred CcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHH---HHHHcC------C
Confidence 468999999999854 4499999999999 999999999999999999888999999996665 999999 7
Q ss_pred ccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
+++|||++|++|.. .....|.++.+.|.+++.+.+
T Consensus 88 ~siPTlilFkdG~~----v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 88 AVCPSLAVVQPERT----LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp CSSSEEEEEECCEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred ccCCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHHh
Confidence 79999999999974 356689999999999998763
No 73
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.55 E-value=1.2e-15 Score=137.45 Aligned_cols=105 Identities=17% Similarity=0.176 Sum_probs=91.4
Q ss_pred cceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
.+.|..++..+|...+ .++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------ 81 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPE---TARNFQ------ 81 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHH---HHHhcC------
Confidence 3457899999998766 678999999999999999999999999999998778999999996655 899998
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++||+++|.+|.. ...|.|..+.+.|.+|+.+.
T Consensus 82 i~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 82 VVSIPTLILFKDGQP----VKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHTCSC
T ss_pred CCcCCEEEEEECCEE----EEEecCCCCHHHHHHHHHHH
Confidence 669999999988753 35688999999999998766
No 74
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.55 E-value=4.4e-14 Score=144.82 Aligned_cols=194 Identities=11% Similarity=0.093 Sum_probs=136.8
Q ss_pred Ccccc-cCCCcEEEEEeccC--CCCCCCcchHHHHHHHHh---hcc--cceeeeeccchhhhhHHHHhCCCCcccccccc
Q 005374 146 FPSIF-HDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALL---EGI--ANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (699)
Q Consensus 146 F~~~v-~~~~~~lV~FYapw--C~hCk~l~p~~~~~A~~L---~g~--~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gy 217 (699)
|...+ .-..+++|.||++| |++|+.+.|.++++|+.. +|. +.|+.|||++++. +|++|+ |+++
T Consensus 17 l~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~---~~~~~g------v~~~ 87 (243)
T 2hls_A 17 LRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSD---KFSEFK------VERV 87 (243)
T ss_dssp HHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHH---HHHHTT------CCSS
T ss_pred HHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHH---HHHhcC------CCcC
Confidence 33444 24578999999999 999999999999999873 333 7899999996654 999999 6699
Q ss_pred cEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhc-cCCcceecccchhhhhhhhhcCCCcEEEE-EEcC---CCCCc
Q 005374 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL-KLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSK---TGERA 292 (699)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~-~lP~~~~it~~~~~~~Fl~~~~~~~v~vl-~f~~---~~~~~ 292 (699)
||+++| +| . ..|.|.+..+.+..|+...+. ..+.. .++ ++..+. +... .+.+.++ |+.. .|...
T Consensus 88 Pt~~i~-~g-~-----~~~~G~~~~~~l~~fv~~~l~~~~~~~-~l~-~~~~~~-~~~~-~~~~~vv~F~a~wC~~C~~~ 156 (243)
T 2hls_A 88 PTVAFL-GG-E-----VRWTGIPAGEEIRALVEVIMRLSEDES-GLE-DATKEA-LKSL-KGRVHIETIITPSCPYCPYA 156 (243)
T ss_dssp SEEEET-TT-T-----EEEESCCCTTHHHHHHHHHHHHHTTCC-CCC-HHHHHH-HHHC-CSCEEEEEEECSSCSSHHHH
T ss_pred CEEEEE-CC-c-----eeEcCCCcHHHHHHHHHHHHhccCCCC-CCC-HHHHHH-HHHc-CCCcEEEEEECCCCCCcHHH
Confidence 999999 55 2 678999888899999876532 12211 122 221222 2222 2345455 5443 33335
Q ss_pred hHHHHHHHHhcc----CCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHhhcc
Q 005374 293 SPFVRQISRNYW----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 293 ~~~~~~~A~~~~----~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~~~~ 366 (699)
.|.+..+|..+. ..+.++.|.... ..+++++|+|.++||+++ +++ +.|.|..+.+.|.+||....-.
T Consensus 157 ~p~l~~la~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~V~~vPt~~i---~G~--~~~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 157 VLLAHMFAYEAWKQGNPVILSEAVEAYE--NPDIADKYGVMSVPSIAI---NGY--LVFVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEEETTT--CHHHHHHTTCCSSSEEEE---TTE--EEEESCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcccccCCcEEEEEEECcc--CHHHHHHcCCeeeCeEEE---CCE--EEEeCCCCHHHHHHHHHHHhhc
Confidence 677777887773 467788776432 468999999999999988 332 3589999999999999876433
No 75
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.54 E-value=9.2e-16 Score=138.60 Aligned_cols=99 Identities=11% Similarity=0.157 Sum_probs=87.4
Q ss_pred EEecCCCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 139 NVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 139 ~~Lt~~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
...|.++|++.+. .+++++|.||++||++|+.+.|.|+++++.+.+ +.++.|||++++. +|++++ |++
T Consensus 15 ~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~---l~~~~~------v~~ 84 (116)
T 3qfa_C 15 QIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQD---VASECE------VKS 84 (116)
T ss_dssp CCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHH---HHHHTT------CCS
T ss_pred CCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH---HHHHcC------Ccc
Confidence 4577889999886 899999999999999999999999999999977 8999999996655 999998 679
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+||+++|.+|.. ...|.|. +.+.|.+|+.+.
T Consensus 85 ~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 85 MPTFQFFKKGQK----VGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp SSEEEEESSSSE----EEEEESC-CHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEcCC-CHHHHHHHHHHh
Confidence 999999988864 3567898 999999999875
No 76
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.54 E-value=1.6e-15 Score=137.38 Aligned_cols=103 Identities=17% Similarity=0.269 Sum_probs=91.1
Q ss_pred eEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
.|..+|.++|.+.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+++.. +|++++ |.
T Consensus 14 ~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~---l~~~~~------v~ 84 (119)
T 1w4v_A 14 TFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTD---LAIEYE------VS 84 (119)
T ss_dssp EEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHH---HHHHTT------CC
T ss_pred EEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHH---HHHHcC------CC
Confidence 57889999999876 678999999999999999999999999999998778999999996654 999998 66
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 85 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 85 AVPTVLAMKNGDV----VDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred cccEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 9999999987753 35688999999999999875
No 77
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.54 E-value=6.1e-15 Score=148.93 Aligned_cols=103 Identities=20% Similarity=0.281 Sum_probs=92.3
Q ss_pred eEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc---cceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~---~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
.+..++.++|+..+..+++++|.||++||++|+.+.|.|+++|+.+.+. +.++.|||++++. +|++++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~---l~~~~~------ 201 (241)
T 3idv_A 131 VTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD---LAKRFD------ 201 (241)
T ss_dssp SSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH---HHHHTT------
T ss_pred cceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH---HHHHcC------
Confidence 4688999999998887889999999999999999999999999999765 6999999996654 999998
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|+++||+++|.+|.. ..|.|.++.++|++|+.+++
T Consensus 202 v~~~Pt~~~~~~g~~-----~~~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 202 VSGYPTLKIFRKGRP-----YDYNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp CCSSSEEEEEETTEE-----EECCSCCSHHHHHHHHHHHT
T ss_pred CcccCEEEEEECCeE-----EEecCCCCHHHHHHHHHhhh
Confidence 669999999998853 46999999999999999883
No 78
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=9.9e-16 Score=142.23 Aligned_cols=110 Identities=15% Similarity=0.270 Sum_probs=88.3
Q ss_pred ceEEEecCCCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc-ccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 136 HAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g-~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
+.|..+|.++|+..+. .+++++|.|||+||++|+.+.|.|+++++.+.+ .+.++.|||++++. +|+++++....
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~---~~~~~~v~~~~ 83 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTD---VSTRYKVSTSP 83 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHH---HHHHTTCCCCS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHH---HHHHccCcccC
Confidence 3578999999999884 345999999999999999999999999999986 57999999996655 89999822111
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.|+++||+++|.+|.. ...+.|..+.+.|.+|+.+.
T Consensus 84 ~~~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 84 LTKQLPTLILFQGGKE----AMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SSSCSSEEEEESSSSE----EEEESCBCSSSCBCCCCCCH
T ss_pred CcCCCCEEEEEECCEE----EEEecCcCchHHHHHHHhcc
Confidence 1229999999988864 35678988888887777544
No 79
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.54 E-value=9.4e-15 Score=137.79 Aligned_cols=102 Identities=11% Similarity=0.102 Sum_probs=76.8
Q ss_pred EEEecCCCCcccccCCCcEEEEEeccC--CCCCCCcchHHHHHHHHhhcccc--eeeeeccchhhhhHHHHhCCCCcccc
Q 005374 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGIAN--TGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapw--C~hCk~l~p~~~~~A~~L~g~~~--va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
+..||.++|++.+.++..++|.||++| |++|+.++|.|+++++++ +.+. |++||+++++. +|++|+
T Consensus 19 ~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~---la~~~~------ 88 (142)
T 2es7_A 19 WQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEA---IGDRFN------ 88 (142)
T ss_dssp CEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHH---HHHTTT------
T ss_pred CcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHH---HHHhcC------
Confidence 578999999999977778999999987 999999999999999999 7678 99999996554 999998
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|+++||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 89 V~~iPT~~~fk~G~~----v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 89 VRRFPATLVFTDGKL----RGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp CCSSSEEEEESCC--------CEESCCCHHHHHHHHHHHH
T ss_pred CCcCCeEEEEeCCEE----EEEEeCCCCHHHHHHHHHHHh
Confidence 779999999998864 357899999999999999884
No 80
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.53 E-value=9.8e-16 Score=138.90 Aligned_cols=65 Identities=15% Similarity=0.172 Sum_probs=60.8
Q ss_pred ccCcccccCcCCCCCH--HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhcccCcCCc
Q 005374 36 PPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGI 101 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~ 101 (699)
..++|+||||+++|+. ++||+|||+|+++||||+++. .++|++|++||++|+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 3589999999999999 999999999999999999865 6899999999999999999999999874
No 81
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.53 E-value=5.2e-14 Score=142.48 Aligned_cols=202 Identities=7% Similarity=0.033 Sum_probs=148.8
Q ss_pred eEEEe-cCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 137 AFNVV-TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 137 ~V~~L-t~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
++.+| |.++|++.+.++++++|.||++| |..+.++|.++|+.|. ...+|.+.- +. +|++++ |+
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~-~~~F~~t~~---~~---v~~~~~------v~ 73 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKFP-GVSFGISTD---SE---VLTHYN------IT 73 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTCT-TSEEEEECC---HH---HHHHTT------CC
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhCC-CceEEEECC---HH---HHHHcC------CC
Confidence 34566 55889988888999999999998 5789999999999994 567876542 23 888988 66
Q ss_pred cccEEEEcCCCCCCCCcccccc----CCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcC-CCC
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSK-TGE 290 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~----G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~-~~~ 290 (699)
+ |+|++|+++.. .+..|. |.++.++|.+|+... .+|.+..++.++ +..+.... ....+++|.+ .+.
T Consensus 74 ~-p~i~lfk~~~~---~~~~~~~~~~g~~~~~~l~~fi~~~--~~plv~e~t~~n-~~~~~~~~--~~~~~l~f~~~~~~ 144 (227)
T 4f9z_D 74 G-NTICLFRLVDN---EQLNLEDEDIESIDATKLSRFIEIN--SLHMVTEYNPVT-VIGLFNSV--IQIHLLLIMNKASP 144 (227)
T ss_dssp S-SEEEEEETTTT---EEEEECHHHHHTCCHHHHHHHHHHH--CCCSEEECCHHH-HHHHHHSS--CCEEEEEEECTTST
T ss_pred C-CeEEEEEecCc---ccccccccccCCCCHHHHHHHHHHh--CCCceeecCccc-HHHHhccC--CceEEEEEEcCCcc
Confidence 8 99999997532 245777 489999999999998 578777777655 45555432 2244455532 221
Q ss_pred ---CchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCC--CCCEEEEEcCCCCCceee-cCCCChhHHHHHHHHh
Q 005374 291 ---RASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY-YGSFNNSRLSEVMEQN 363 (699)
Q Consensus 291 ---~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~--~~PtIvlfk~~~~~pv~y-~g~~~~~~L~~fi~~~ 363 (699)
.....++.+|..|++++.|+.+...+.....+++.||+. .+|+|+++...+.+...+ .++++.+.|.+|++..
T Consensus 145 ~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 145 EYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp THHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 134666779999999999999976433345688999998 699999998644332223 4779999999999764
No 82
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.52 E-value=6.4e-15 Score=131.09 Aligned_cols=102 Identities=13% Similarity=0.159 Sum_probs=87.4
Q ss_pred ceEEEecCCCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeecc-chhhhhHHHHhCCCCccc
Q 005374 136 HAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-DIRLATHLAERKPIGQIF 212 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~-~~~~~~~L~~k~~i~~~f 212 (699)
..|..||.++|++.+. .+++++|.||++||++|+.+.|.|+++++.+.+ +.+..|||+ ++.. ++++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~---~~~~~~----- 75 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKT---LAKELG----- 75 (111)
T ss_dssp TSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHH---HHHHHC-----
T ss_pred CccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHH---HHHHcC-----
Confidence 4589999999999885 689999999999999999999999999999875 689999998 4444 899988
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|++|.. ...+.|.. .+.|.+++.+.
T Consensus 76 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 109 (111)
T 2pu9_C 76 -IRVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 109 (111)
T ss_dssp -CSBSSEEEEESSSSE----EEEEESSC-HHHHHHHHHHH
T ss_pred -CCeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 669999999998864 24567874 88999998765
No 83
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.52 E-value=6.7e-15 Score=134.97 Aligned_cols=97 Identities=11% Similarity=0.110 Sum_probs=82.8
Q ss_pred cCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEE
Q 005374 142 TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLV 221 (699)
Q Consensus 142 t~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~ 221 (699)
+.+.++....++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++. +|++++ |+++||++
T Consensus 31 ~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~---l~~~~~------v~~~Pt~~ 101 (128)
T 3ul3_B 31 GSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNES---LARKFS------VKSLPTII 101 (128)
T ss_dssp CCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHH---HHHHTT------CCSSSEEE
T ss_pred CccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH---HHHHcC------CCCcCEEE
Confidence 334445445789999999999999999999999999999998778999999996654 999998 67999999
Q ss_pred EcCCCCCCCCccccccCCcCHHHHHHHHHH
Q 005374 222 AFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (699)
Q Consensus 222 ~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k 251 (699)
+|.+|.. ...+.|.++.+.|.+|+.+
T Consensus 102 ~~~~G~~----~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 102 LLKNKTM----LARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEETTEE----EEEESSCCCHHHHHHHHTT
T ss_pred EEECCEE----EEEecCCCCHHHHHHHHHh
Confidence 9987753 3578899999999999864
No 84
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.52 E-value=4.9e-15 Score=149.45 Aligned_cols=106 Identities=16% Similarity=0.245 Sum_probs=94.0
Q ss_pred cceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
.+.+..||.++|+..+ +++++++|.|||+||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~---l~~~~~------ 81 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG---TAPKYG------ 81 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT---TGGGGT------
T ss_pred CCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH---HHHHcC------
Confidence 3457899999999864 789999999999999999999999999999998878999999996655 888888
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|.++||+++|.+|.. ...|.|.++.+.|.+|+.+.+
T Consensus 82 v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 82 IRGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp CCSBSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHS
T ss_pred CCcCCEEEEEECCeE----EEEeccccChHHHHHHHHhhc
Confidence 779999999998854 357899999999999999883
No 85
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.52 E-value=1e-14 Score=149.37 Aligned_cols=102 Identities=16% Similarity=0.094 Sum_probs=88.7
Q ss_pred eEEEecCCCCcccccCCCcEEEEEec--cCCCCCCCcchHHHHHHHHhhc--ccceeeee-----ccchhhhhHHHHhCC
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYS--DGSYLCGQFSGAWKTIAALLEG--IANTGMVE-----LGDIRLATHLAERKP 207 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYa--pwC~hCk~l~p~~~~~A~~L~g--~~~va~Vd-----c~~~~~~~~L~~k~~ 207 (699)
.|..||..||+.+|+++++|||.||| |||+ ++|.|+++|+.+.+ .+.|++|| |++++. ||++|+
T Consensus 6 ~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~---l~~~~~ 78 (240)
T 2qc7_A 6 GALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNME---LSEKYK 78 (240)
T ss_dssp TCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHH---HHHHTT
T ss_pred CceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHH---HHHHcC
Confidence 47899999999988888999999999 9999 99999999999974 46899999 443544 999998
Q ss_pred CCcccccc--cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 208 IGQIFFRR--GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 208 i~~~f~V~--gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|+ +||||++|++|... .+..|.|.++.+.|++|+.+.+
T Consensus 79 ------V~~~~~PTl~~f~~G~~~--~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 79 ------LDKESYPVFYLFRDGDFE--NPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp ------CCGGGCSEEEEEETTCSS--CCEECCSCSCHHHHHHHHHHTT
T ss_pred ------CCCCCCCEEEEEeCCCcC--cceeecCCCCHHHHHHHHHHhc
Confidence 88 99999999998611 2578999999999999999883
No 86
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.51 E-value=7.9e-15 Score=136.49 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=77.2
Q ss_pred ceEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
..|..||.++|...+..++.++|.||++||++|+.+.|.|+++++.+.+.+.++.||++++.. ++++++ |+
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~ 103 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPG---LAARYG------VR 103 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH---HHHHTT------CC
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHH---HHHHCC------CC
Confidence 357889999999988433339999999999999999999999999998778999999996654 999998 66
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
++||+++|.+|.. ...|.|.++.+.|.+|+.+.+
T Consensus 104 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 104 SVPTLVLFRRGAP----VATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred ccCEEEEEeCCcE----EEEEeCCCCHHHHHHHHHHHH
Confidence 9999999988853 356889999999999998873
No 87
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.51 E-value=4.6e-15 Score=136.32 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=88.0
Q ss_pred EEEecC-CCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
|..|+. ++|++.+..+++++|.|||+||++|+.+.|.|+++++.+. .+.++.|||+++.. +|++++ |.+
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~---l~~~~~------v~~ 90 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSE---IVSKCR------VLQ 90 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHH---HHHHTT------CCS
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHH---HHHHcC------CCc
Confidence 788999 9999999888999999999999999999999999999985 47999999996655 999998 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+||+++|.+|.. ...|.| .+.+.|.+|+.+.
T Consensus 91 ~Pt~~i~~~G~~----~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 91 LPTFIIARSGKM----LGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp SSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEeC-CCHHHHHHHHHHH
Confidence 999999988853 346788 6889999999876
No 88
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=7.1e-15 Score=127.93 Aligned_cols=60 Identities=23% Similarity=0.333 Sum_probs=56.5
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhcc
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRN 95 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~I~~Ay~vL~d~~~R~~ 95 (699)
..|||+||||+++|+.++||+|||+|+++||||+++ ++.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 579999999999999999999999999999999984 678899999999999999999875
No 89
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.50 E-value=4.9e-15 Score=129.87 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=87.3
Q ss_pred EEEecC-CCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 138 FNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 138 V~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
|.+|+. ++|+..+. ++++++|.||++||++|+.+.|.++++++.+++.+.++.|||+++.. +|++++ |
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v 72 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECED---IAMEYN------I 72 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH---HHHHTT------C
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHH---HHHHcC------C
Confidence 567888 88998885 78999999999999999999999999999997667999999996554 899998 6
Q ss_pred ccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+++||+++|.+|.. ...|.| .+.+.|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 73 SSMPTFVFLKNGVK----VEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp CSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHT
T ss_pred CcccEEEEEcCCcE----EEEEcC-CCHHHHHHHHHHh
Confidence 69999999988853 356788 7889999998764
No 90
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.50 E-value=7.2e-15 Score=129.89 Aligned_cols=100 Identities=13% Similarity=0.167 Sum_probs=83.3
Q ss_pred EEEe-cCCCCcccc--cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 138 FNVV-TSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 138 V~~L-t~~nF~~~v--~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
|..+ +.++|++.+ .++++++|.||+|||++|+.+.|.|+++++.+ +.+.++.||+++++. +|++++ |
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~---~~~~~~------v 72 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQG---TAATNN------I 72 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH---HHHHTT------C
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCHH---HHHhcC------C
Confidence 4455 568899988 57899999999999999999999999999998 447999999996655 899998 6
Q ss_pred ccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+++||+++|.+|.. ...|.|.. .+.|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 105 (107)
T 1gh2_A 73 SATPTFQFFRNKVR----IDQYQGAD-AVGLEEKIKQH 105 (107)
T ss_dssp CSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred CcccEEEEEECCeE----EEEEeCCC-HHHHHHHHHHh
Confidence 69999999988853 34678854 45699998775
No 91
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.50 E-value=9.5e-15 Score=130.04 Aligned_cols=101 Identities=9% Similarity=0.119 Sum_probs=82.7
Q ss_pred EEEecC-CCCcccccC---CCcEEEEEeccCCCCCCCcchHHHHHHHHhh-cccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 138 FNVVTS-EDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-GIANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 138 V~~Lt~-~nF~~~v~~---~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~-g~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
|..|+. ++|++.+.+ +++++|.||++||++|+.+.|.|+++++.++ +.+.++.|||++++. ++++++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~----- 73 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSE---ISELFE----- 73 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHH---HHHHTT-----
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHH---HHHHcC-----
Confidence 577887 899988865 8999999999999999999999999999863 346999999996654 899998
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|.. ...+.|.. .+.|.+++.+.
T Consensus 74 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 107 (112)
T 3d6i_A 74 -ISAVPYFIIIHKGTI----LKELSGAD-PKEYVSLLEDC 107 (112)
T ss_dssp -CCSSSEEEEEETTEE----EEEECSCC-HHHHHHHHHHH
T ss_pred -CCcccEEEEEECCEE----EEEecCCC-HHHHHHHHHHH
Confidence 669999999988753 35677875 45699999876
No 92
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.50 E-value=6.1e-15 Score=125.15 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=59.1
Q ss_pred cCcccccCcCCC--CCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhcccCcCCchh
Q 005374 37 PSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (699)
Q Consensus 37 ~d~Y~vLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~~ 103 (699)
.++|+||||+++ ++.++||+|||+|+++||||++ ++.++|++|++||++|+|+.+|.. +.||..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~-~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-GSHALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS-CCHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC-CCHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 589999999999 9999999999999999999997 467899999999999999999988 5577653
No 93
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.50 E-value=4.4e-15 Score=131.90 Aligned_cols=102 Identities=16% Similarity=0.244 Sum_probs=87.5
Q ss_pred eEEEe-cCCCCcccccC----CCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 137 AFNVV-TSEDFPSIFHD----SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 137 ~V~~L-t~~nF~~~v~~----~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
.|..+ +.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~---- 75 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA---VAEAAG---- 75 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH---HHHHHT----
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHH---HHHHcC----
Confidence 35677 46889988854 8999999999999999999999999999998767999999996554 899998
Q ss_pred cccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|++|.. ...|.|. +.+.|.+|+.+.
T Consensus 76 --v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 76 --ITAMPTFHVYKDGVK----ADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp --CCBSSEEEEEETTEE----EEEEESC-CHHHHHHHHHHH
T ss_pred --CCcccEEEEEECCeE----EEEEcCC-CHHHHHHHHHHH
Confidence 669999999988853 3467888 999999999876
No 94
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.49 E-value=2.6e-15 Score=145.31 Aligned_cols=65 Identities=15% Similarity=0.205 Sum_probs=58.4
Q ss_pred ccCcccccCcCCCCC--HHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhcccCcCCc
Q 005374 36 PPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGI 101 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~ 101 (699)
..|+|+||||+++|+ .++||+|||+|++++|||++++ +++|++|++||++|+||.+|+.||++|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 469999999999999 6999999999999999999864 6899999999999999999999999985
No 95
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.23 E-value=2.4e-15 Score=131.26 Aligned_cols=102 Identities=21% Similarity=0.280 Sum_probs=88.5
Q ss_pred EEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
|..||.++|.+.+ +++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||+++.. +|++++ |.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 73 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPN---TAAQYG------IRS 73 (106)
Confidence 5778999999776 678999999999999999999999999999998778999999996554 888888 679
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+||+++|.+|.. ...|.|..+.+.|.+|+.+.
T Consensus 74 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 74 IPTLLLFKNGQV----VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 999999987754 35778999999999998754
No 96
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.49 E-value=9.4e-15 Score=130.31 Aligned_cols=99 Identities=15% Similarity=0.267 Sum_probs=85.5
Q ss_pred EEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccccc
Q 005374 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (699)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyP 218 (699)
...+.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+ +.+..|||+++.. +|++++ |+++|
T Consensus 10 ~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~---l~~~~~------v~~~P 79 (109)
T 3f3q_A 10 QFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGD---VAQKNE------VSAMP 79 (109)
T ss_dssp ECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH---HHHHTT------CCSSS
T ss_pred CCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH---HHHHcC------CCccC
Confidence 4567788999898899999999999999999999999999999866 6899999996655 999998 67999
Q ss_pred EEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 219 Tl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++|.+|.. ...+.|. +.+.|.+++.+.
T Consensus 80 t~~~~~~G~~----~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 80 TLLLFKNGKE----VAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEECCEE----EEEEeCC-CHHHHHHHHHhh
Confidence 9999997753 3567788 679999998765
No 97
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.48 E-value=9.6e-15 Score=132.03 Aligned_cols=101 Identities=15% Similarity=0.200 Sum_probs=88.1
Q ss_pred eEEEecCCCCccccc----CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 137 AFNVVTSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~----~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
.+..++.++|+..+. .+++++|.||++||++|+.+.|.|+++++.+.+ +.+..|||++++. +|++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~---~~~~~~----- 84 (122)
T 2vlu_A 14 VISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKP---IAEQFS----- 84 (122)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH---HHHHTT-----
T ss_pred ceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHH---HHHHcC-----
Confidence 356788899998883 589999999999999999999999999999887 7999999996655 899998
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|.. ...|.|.. .+.|.+|+.+.
T Consensus 85 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 85 -VEAMPTFLFMKEGDV----KDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp -CCSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred -CCcccEEEEEeCCEE----EEEEeCcC-HHHHHHHHHHH
Confidence 669999999988853 35678988 99999999887
No 98
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.48 E-value=7.8e-15 Score=128.53 Aligned_cols=96 Identities=13% Similarity=0.205 Sum_probs=83.5
Q ss_pred cCCCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccE
Q 005374 142 TSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (699)
Q Consensus 142 t~~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPT 219 (699)
+.++|++.+. .+++++|.||++||++|+.+.|.|+++++.+.+ +.++.|||++++. ++++++ |+++||
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~---~~~~~~------v~~~Pt 76 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQD---VASESE------VKSMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHH---HHHHTT------CCBSSE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHH---HHHHcC------CCcCcE
Confidence 4567888885 789999999999999999999999999999977 7999999996655 899998 669999
Q ss_pred EEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 220 LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 220 l~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+++|.+|.. ...|.|. +.+.|.+|+.+.
T Consensus 77 ~~~~~~g~~----~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 77 FQFFKKGQK----VGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECCeE----EEEEeCC-CHHHHHHHHHHh
Confidence 999988854 3567898 999999999875
No 99
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.47 E-value=9.5e-15 Score=139.87 Aligned_cols=67 Identities=22% Similarity=0.482 Sum_probs=61.2
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCCh---------HHHHHHHHHHHHHcCChhhhcccCcCCch
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPS---------TADFLKIQYAYELLTDPLWKRNYDVYGID 102 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---------~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~ 102 (699)
..|||+||||+++++.++||+|||+|++++|||+++.. .++|.+|++||++|+||.+|+.||..+..
T Consensus 9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 57999999999999999999999999999999997632 47899999999999999999999987643
No 100
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.47 E-value=3.4e-14 Score=129.48 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=86.9
Q ss_pred EEEecCCCCc-----ccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeee--ccchhhhhHHHHhCCCCc
Q 005374 138 FNVVTSEDFP-----SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--LGDIRLATHLAERKPIGQ 210 (699)
Q Consensus 138 V~~Lt~~nF~-----~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vd--c~~~~~~~~L~~k~~i~~ 210 (699)
+..++..+|+ .....+++++|.||++||++|+.+.|.++++++.+.+.+.+..|| ++++.. ++++++
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~---~~~~~~--- 79 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNID---LAYKYD--- 79 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHH---HHHHTT---
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHH---HHHHcC---
Confidence 3557777777 445678999999999999999999999999999997667999999 885544 899998
Q ss_pred ccccccccEEEEcC-CCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 211 IFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 211 ~f~V~gyPTl~~f~-~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|.++||+++|. +|.. ...|.|..+.+.|.+|+.+.+
T Consensus 80 ---v~~~Pt~~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 80 ---ANIVPTTVFLDKEGNK----FYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp ---CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHHHC
T ss_pred ---CcceeEEEEECCCCCE----EEEecCCCCHHHHHHHHHHHh
Confidence 66999999998 6643 346789999999999999873
No 101
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.47 E-value=2e-14 Score=130.51 Aligned_cols=103 Identities=15% Similarity=0.205 Sum_probs=87.4
Q ss_pred cceEEEecCCCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeecc-chhhhhHHHHhCCCCcc
Q 005374 135 VHAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-DIRLATHLAERKPIGQI 211 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~-~~~~~~~L~~k~~i~~~ 211 (699)
.+.|..++.++|.+.+. ++++++|.||++||++|+.+.|.++++++.+.+ +.+..|||+ +++. +|++++
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~---~~~~~~---- 88 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKT---LAKELG---- 88 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHH---HHHHHC----
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHH---HHHHcC----
Confidence 34578999999998884 789999999999999999999999999999875 689999998 4444 889988
Q ss_pred cccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|++|.. ...+.|.. .+.|.+++.+.
T Consensus 89 --v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 89 --IRVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp --CSSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred --CCeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 669999999998853 24567876 89999998765
No 102
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.47 E-value=1.3e-14 Score=130.45 Aligned_cols=100 Identities=16% Similarity=0.230 Sum_probs=85.9
Q ss_pred eEEEecC-CCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 137 AFNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 137 ~V~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
.|..++. ++|+..+. .+++++|.||++||++|+.+.|.|+++++.+ .+.++.|||+++.. +|++++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~---~~~~~~------ 82 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEE---TARKYN------ 82 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHH---HHHHTT------
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHH---HHHHcC------
Confidence 3788888 99999885 7899999999999999999999999999887 46899999996554 899998
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|.. ...+.| .+.+.|.+++.+.
T Consensus 83 v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 83 ISAMPTFIAIKNGEK----VGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp CCSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred CCccceEEEEeCCcE----EEEEeC-CCHHHHHHHHHHh
Confidence 669999999988853 346778 6889999998765
No 103
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.46 E-value=2.3e-14 Score=127.98 Aligned_cols=99 Identities=13% Similarity=0.147 Sum_probs=85.4
Q ss_pred EEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccccc
Q 005374 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (699)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyP 218 (699)
..+|.++| +.+.++++++|.||++||++|+.+.|.|++++..+. .+.+..||++++.. +|++++ |+++|
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~---l~~~~~------v~~~P 74 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPE---LMKELG------FERVP 74 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHH---HHHHTT------CCSSC
T ss_pred ecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHH---HHHHcC------CcccC
Confidence 56788999 677778999999999999999999999999998875 46899999996554 899998 66999
Q ss_pred EEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 219 Tl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++|.+|.. ...+.|..+.+.|..++...
T Consensus 75 t~~~~~~G~~----v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 75 TLVFIRDGKV----AKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp EEEEEESSSE----EEEEESCCCHHHHHHHHHTC
T ss_pred EEEEEECCEE----EEEEcCCCCHHHHHHHHHHH
Confidence 9999988864 35678999999999999765
No 104
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.46 E-value=5e-15 Score=133.56 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=81.7
Q ss_pred EEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccch---hhhhHHHHhCCCCccccc
Q 005374 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RLATHLAERKPIGQIFFR 214 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~---~~~~~L~~k~~i~~~f~V 214 (699)
+..++.++|...+.++++++|.||||||++|+++.|.|+++++.+.. .+..+|++.. .....++++++ |
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~------i 85 (118)
T 1zma_A 14 LEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSEEPSQLNDLQAFRSRYG------I 85 (118)
T ss_dssp SEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEEETTCGGGHHHHHHHHHHHT------C
T ss_pred hhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEEECCCcCcHHHHHHHHHHcC------C
Confidence 46788899998888889999999999999999999999999998864 3445544421 12345888888 6
Q ss_pred ccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHH
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~ 250 (699)
+++||+++|.+|.. ...+.|.++.+.|.+|+.
T Consensus 86 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 86 PTVPGFVHITDGQI----NVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CSSCEEEEEETTEE----EEECCTTCCHHHHHHHHT
T ss_pred CCCCeEEEEECCEE----EEEecCCCCHHHHHHHhh
Confidence 79999999988854 357899999999999974
No 105
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.46 E-value=9.6e-15 Score=130.48 Aligned_cols=100 Identities=11% Similarity=0.233 Sum_probs=87.5
Q ss_pred EEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccc
Q 005374 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gy 217 (699)
...+|.++|++.++.+++++|.||++||++|+.+.|.++++++.+.+ +.++.|||+++.. ++++++ |.++
T Consensus 11 ~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~---~~~~~~------v~~~ 80 (112)
T 1syr_A 11 KIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVSE---VTEKEN------ITSM 80 (112)
T ss_dssp EEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTHH---HHHHTT------CCSS
T ss_pred EEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCHH---HHHHcC------CCcc
Confidence 47889999999998889999999999999999999999999999875 7899999996554 899998 6699
Q ss_pred cEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
||+++|.+|.. ...+.|. +.+.|.+|+.+.
T Consensus 81 Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 81 PTFKVYKNGSS----VDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp SEEEEEETTEE----EEEEESC-CHHHHHHHHHTT
T ss_pred cEEEEEECCcE----EEEEeCC-CHHHHHHHHHHh
Confidence 99999988853 3467898 999999999764
No 106
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.46 E-value=5.3e-15 Score=157.93 Aligned_cols=67 Identities=24% Similarity=0.442 Sum_probs=0.0
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhhcccCcCCch
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~I~~Ay~vL~d~~~R~~YD~~g~~ 102 (699)
..|||+||||+++|+.++||+|||+|+++||||+|+ .+.++|++|++||++|+||.+|+.||+|+..
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 469999999999999999999999999999999876 4678899999999999999999999998544
No 107
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.46 E-value=2.1e-14 Score=136.65 Aligned_cols=104 Identities=11% Similarity=0.058 Sum_probs=87.1
Q ss_pred EEEecC-CCCcccc--cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 138 FNVVTS-EDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 138 V~~Lt~-~nF~~~v--~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
|..|+. .+|++.| +++++++|.|||+|||.|+.++|.++++|+++.+.+.|++||.++++. ++++|+ |
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e---~a~~y~------V 93 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPD---FNTMYE------L 93 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT---TTTTTT------C
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHH---HHHHcC------C
Confidence 455654 7898887 478899999999999999999999999999998878999999997766 889988 7
Q ss_pred ccccEEEEcCCCCCCCCccc-------cccCCcC-HHHHHHHHHHH
Q 005374 215 RGLPSLVAFPPGCKSSDCMT-------RFEGELS-VDAVTDWFATA 252 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~-------~Y~G~rs-~~~Iv~fi~k~ 252 (699)
++.||+++|.+|... ... ...|... .+.|.+++...
T Consensus 94 ~siPT~~fFk~G~~v--~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 94 YDPVSVMFFYRNKHM--MIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp CSSEEEEEEETTEEE--EEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEEE--EEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 799999999998641 001 4678876 88899998766
No 108
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.44 E-value=1.2e-14 Score=134.88 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=87.6
Q ss_pred eEEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeec---------cchhhhhHHHHhCC
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL---------GDIRLATHLAERKP 207 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc---------~~~~~~~~L~~k~~ 207 (699)
.|..+|.++|++.+.+ +++|.|||+||++|+.+.|.|+++++.+. +.++.||| ++ ...+|++++
T Consensus 17 ~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~---~~~l~~~~~ 89 (135)
T 3emx_A 17 RLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSA---ARLEMNKAG 89 (135)
T ss_dssp EEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHH---HHHHHHHHT
T ss_pred ceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhh---hHHHHHHcC
Confidence 6789999999998866 99999999999999999999999999886 79999999 63 344899998
Q ss_pred CCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 208 IGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 208 i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|.. ...+.|..+.+.+..++++.
T Consensus 90 ------v~~~Pt~~~~~~G~~----v~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 90 ------VEGTPTLVFYKEGRI----VDKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp ------CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ------CceeCeEEEEcCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 679999999998864 35788999999999999887
No 109
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.44 E-value=2.6e-14 Score=124.78 Aligned_cols=99 Identities=12% Similarity=0.251 Sum_probs=84.2
Q ss_pred EEecC-CCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 139 NVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 139 ~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
..|+. ++|++.+. .+++++|.||++||++|+.+.|.++++++.+. .+.++.||+++++. +|++++ |+
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~---~~~~~~------v~ 71 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEE---AAAKYS------VT 71 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHH---HHHHTT------CC
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHH---HHHHcC------Cc
Confidence 45666 88988885 78999999999999999999999999999886 46899999996554 899998 66
Q ss_pred cccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 216 gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
++||+++|.+|.. ...+.| .+.+.|.+|+.+.
T Consensus 72 ~~Pt~~~~~~g~~----~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 72 AMPTFVFIKDGKE----VDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp SSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred cccEEEEEeCCcE----EEEEeC-CCHHHHHHHHHhh
Confidence 9999999988853 346678 6899999999765
No 110
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.43 E-value=2.3e-14 Score=135.82 Aligned_cols=104 Identities=16% Similarity=0.183 Sum_probs=86.5
Q ss_pred EecCCCCcccc--cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccc
Q 005374 140 VVTSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (699)
Q Consensus 140 ~Lt~~nF~~~v--~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gy 217 (699)
..+.++|+..+ .++++++|.|||+||++|+.+.|.++++++++.+.+.++.||+++++. +|++++ |.++
T Consensus 8 i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~---l~~~~~------v~~~ 78 (149)
T 3gix_A 8 LTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAV---YTQYFD------ISYI 78 (149)
T ss_dssp ECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCH---HHHHTT------CCSS
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHH---HHHHcC------CCcc
Confidence 34667898888 568999999999999999999999999999998878999999996655 999998 6699
Q ss_pred cEEEEcCCCCCC-----CCccccccC-CcCHHHHHHHHHHH
Q 005374 218 PSLVAFPPGCKS-----SDCMTRFEG-ELSVDAVTDWFATA 252 (699)
Q Consensus 218 PTl~~f~~g~~~-----~~~~~~Y~G-~rs~~~Iv~fi~k~ 252 (699)
||+++|.+|... ......+.| ..+.+.|.+++...
T Consensus 79 Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 79 PSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp SEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred CeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 999999988531 000046778 89999999999766
No 111
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.43 E-value=3.8e-14 Score=128.74 Aligned_cols=102 Identities=17% Similarity=0.264 Sum_probs=87.6
Q ss_pred eEEEecC-CCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 137 AFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 137 ~V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
.+..|+. ++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+. +.++.|||++++. +|++++ |
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~---~~~~~~------v 86 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQ---IAQEVG------I 86 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHH---HHHHHT------C
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHH---HHHHcC------C
Confidence 3466665 889998888899999999999999999999999999998876 6899999996655 899988 6
Q ss_pred ccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.++||+++|.+|.. ...|.|. +.+.|.+|+.+.
T Consensus 87 ~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 87 RAMPTFVFFKNGQK----IDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp CSSSEEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred CcccEEEEEECCeE----EeeEcCC-CHHHHHHHHHHh
Confidence 69999999988753 3467888 999999999876
No 112
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.42 E-value=2e-14 Score=129.56 Aligned_cols=99 Identities=11% Similarity=0.160 Sum_probs=82.7
Q ss_pred EEEecC-CCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
+..+++ ++|+..++++++++|.||++||++|+.+.|.|+++++.+.+ +.++.|||++++. +|++++ |++
T Consensus 14 ~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~---l~~~~~------v~~ 83 (114)
T 2oe3_A 14 ITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPD---IAKECE------VTA 83 (114)
T ss_dssp SCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHH---HHHHTT------CCS
T ss_pred eeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH---HHHHCC------CCc
Confidence 344554 45666677889999999999999999999999999999987 8999999996654 899998 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k 251 (699)
+||+++|.+|.. ...+.|.. .+.|.+|+.+
T Consensus 84 ~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 84 MPTFVLGKDGQL----IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp BSEEEEEETTEE----EEEEESSC-HHHHHHHHHT
T ss_pred ccEEEEEeCCeE----EEEEeCCC-HHHHHHHHHh
Confidence 999999988853 34678988 8999998864
No 113
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.41 E-value=4.7e-14 Score=122.05 Aligned_cols=61 Identities=10% Similarity=0.078 Sum_probs=55.3
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhhccc
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNY 96 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~----~~~~f~~I~~Ay~vL~d~~~R~~Y 96 (699)
..++|+||||+++|+.++||+|||+|+++||||++++ +.++|++|++||++|+|...|..+
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 4689999999999999999999999999999999985 468899999999999998777443
No 114
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.41 E-value=5.6e-14 Score=128.38 Aligned_cols=99 Identities=11% Similarity=0.186 Sum_probs=79.0
Q ss_pred eEEEecCCCCcccc-cCCC--cEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 137 AFNVVTSEDFPSIF-HDSK--PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v-~~~~--~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
.|.++|.++|.+.| ++.+ +++|.||||||++|+.+.|.++++|+++.+ ++|.+||+++ ++++++
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~-v~f~kvd~d~------~~~~~~------ 70 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE-TKFVKAIVNS------CIQHYH------ 70 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT-SEEEEEEGGG------TSTTCC------
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC-CEEEEEEhHH------hHHHCC------
Confidence 57889999999887 4443 899999999999999999999999999854 6899999993 245666
Q ss_pred cccccEEEEcCCCCCCCCccccccCC-------cCHHHHHHHHHHH
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGE-------LSVDAVTDWFATA 252 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~-------rs~~~Iv~fi~k~ 252 (699)
|+++||+++|++|... ..+.|. .+.+.|-.++.+.
T Consensus 71 v~~~PT~~~fk~G~~v----~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 71 DNCLPTIFVYKNGQIE----AKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp GGGCSEEEEEETTEEE----EEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CCCCCEEEEEECCEEE----EEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 8899999999999643 344443 4677777777654
No 115
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.41 E-value=2.2e-14 Score=159.41 Aligned_cols=106 Identities=21% Similarity=0.331 Sum_probs=89.3
Q ss_pred cceEEEecCCCCcccccC--CCcEEEEEeccCCCCCCCcchHHHHHHHHhh---c-----ccceeeeeccchhhhhHHHH
Q 005374 135 VHAFNVVTSEDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLE---G-----IANTGMVELGDIRLATHLAE 204 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~~--~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~---g-----~~~va~Vdc~~~~~~~~L~~ 204 (699)
.+.|..||.++|+..+.. ++++||.||||||++|+.+.|.|+++++.+. + .+.|++|||++++. +|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~---la~ 98 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVD---LCR 98 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHH---HHH
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHH---HHH
Confidence 346899999999999853 4799999999999999999999999999997 3 47899999996654 999
Q ss_pred hCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 205 RKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 205 k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+++ |+++||+++|.+|... ....|.|.++.+.| .|+.++
T Consensus 99 ~y~------V~~~PTlilf~~gg~~--~~~~y~G~r~~e~L-~fI~k~ 137 (470)
T 3qcp_A 99 KYD------INFVPRLFFFYPRDSC--RSNEECGTSSLEHV-AFENSH 137 (470)
T ss_dssp HTT------CCSSCEEEEEEESSCC--CTTSCCCCCCEEEE-ECSCTT
T ss_pred HcC------CCccCeEEEEECCCce--EEEEeeCCCCHHHH-HHHHHh
Confidence 998 6799999999766432 35789999988887 777655
No 116
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.40 E-value=7.9e-14 Score=139.81 Aligned_cols=101 Identities=16% Similarity=0.098 Sum_probs=86.3
Q ss_pred EEecCCCCcccccCCCcE-EEEEeccCCCCCCCcchHHHHHHHHhh----cccceeeeeccchhhhhHHHHhCCCCcccc
Q 005374 139 NVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFF 213 (699)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~-lV~FYapwC~hCk~l~p~~~~~A~~L~----g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~ 213 (699)
..|+.++|+.+...++++ +|.||||||++|+++.|.|++++..+. +.+.++.|||++++. +|++++
T Consensus 119 ~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~------ 189 (226)
T 1a8l_A 119 TNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPE---WADQYN------ 189 (226)
T ss_dssp CCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHH---HHHHTT------
T ss_pred CCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHH---HHHhCC------
Confidence 457777887766655666 999999999999999999999999997 467999999996655 899998
Q ss_pred cccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 214 V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 190 v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 190 VMAVPKIVIQVNGED----RVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp CCSSCEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CcccCeEEEEeCCce----eEEEcCCCCHHHHHHHHHHh
Confidence 669999999998854 36789999999999999876
No 117
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.40 E-value=1.4e-13 Score=155.08 Aligned_cols=104 Identities=16% Similarity=0.269 Sum_probs=89.2
Q ss_pred ceEEEecCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhh-c--ccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-G--IANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 136 ~~V~~Lt~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~-g--~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
..|..|+.++|+..+ ++++++||.||||||+||+.+.|.|+++++.+. + .+.+++|||+.+.. .. ++
T Consensus 358 ~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~----~~-~~---- 428 (504)
T 2b5e_A 358 SSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDV----RG-VV---- 428 (504)
T ss_dssp CSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCC----SS-CC----
T ss_pred ccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcccc----cc-CC----
Confidence 468999999999987 678999999999999999999999999999987 3 45899999995532 22 55
Q ss_pred cccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|++|||+++|++|... ....|.|.++.+.|++|+.+.
T Consensus 429 --v~~~Pt~~~~~~G~~~--~~~~~~G~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 429 --IEGYPTIVLYPGGKKS--ESVVYQGSRSLDSLFDFIKEN 465 (504)
T ss_dssp --CSSSSEEEEECCTTSC--CCCBCCSCCCHHHHHHHHHHH
T ss_pred --ceecCeEEEEeCCcee--cceEecCCCCHHHHHHHHHhc
Confidence 7799999999988642 257899999999999999988
No 118
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.40 E-value=5.6e-14 Score=133.20 Aligned_cols=103 Identities=15% Similarity=0.221 Sum_probs=86.4
Q ss_pred ceEEEec-CCCCcccccC--CCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 136 HAFNVVT-SEDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 136 ~~V~~Lt-~~nF~~~v~~--~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
..|..++ .++|+..+.+ +++++|.||++||++|+.+.|.|+++++.+. .+.++.|||++++. +|++++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~---l~~~~~----- 82 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPE---VSEKYE----- 82 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHH---HHHHTT-----
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHH---HHHHcC-----
Confidence 3567787 4889988854 8999999999999999999999999999874 46999999996655 999998
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|+++||+++|.+|.. ...+.| .+.+.|.+|+.+.+
T Consensus 83 -v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 83 -ISSVPTFLFFKNSQK----IDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp -CCSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHHS
T ss_pred -CCCCCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHHh
Confidence 679999999997753 245677 57888999999884
No 119
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.39 E-value=6.8e-14 Score=129.68 Aligned_cols=105 Identities=10% Similarity=0.146 Sum_probs=87.2
Q ss_pred EEEe-cCCCCccccc----CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 138 FNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 138 V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
|..+ +.++|++.+. .+++++|.||++||++|+.+.|.|+++++.+. .+.+..|||++++. ++++++
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~---~~~~~~----- 96 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSD---FSASWE----- 96 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHH---HHHHTT-----
T ss_pred EEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHH---HHHHcC-----
Confidence 4555 4689998873 58899999999999999999999999999985 46899999996554 999998
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhccCC
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP 257 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~lP 257 (699)
|+++||+++|.+|.. ...+.|. +.+.|.+++.+.+..+|
T Consensus 97 -v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~~~~~~ 135 (139)
T 3d22_A 97 -IKATPTFFFLRDGQQ----VDKLVGA-NKPELHKKITAILDSLP 135 (139)
T ss_dssp -CCEESEEEEEETTEE----EEEEESC-CHHHHHHHHHHHHHTSC
T ss_pred -CCcccEEEEEcCCeE----EEEEeCC-CHHHHHHHHHHHhccCC
Confidence 669999999988753 3456787 88999999998865544
No 120
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.38 E-value=9.9e-14 Score=135.22 Aligned_cols=63 Identities=14% Similarity=0.296 Sum_probs=57.6
Q ss_pred ccCcccccCcCCCCC--HHHHHHHHHHHHHhcCCCCCCC--------hHHHHHHHHHHHHHcCChhhhcccCc
Q 005374 36 PPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDV 98 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~--------~~~~f~~I~~Ay~vL~d~~~R~~YD~ 98 (699)
+.|||+||||+++++ .++||++||+|+++||||++++ +.+.|..|++||++|+||.+|+.||.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~ 75 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLL 75 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 579999999999998 9999999999999999998763 34679999999999999999999996
No 121
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.38 E-value=2.3e-13 Score=132.45 Aligned_cols=61 Identities=18% Similarity=0.254 Sum_probs=56.6
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCChhhhccc
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNY 96 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~------~~~~f~~I~~Ay~vL~d~~~R~~Y 96 (699)
+.|+|++|||++.|+.++||+|||+|+++||||++++ +.+.|.+|++||++|+||.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3699999999999999999999999999999998763 457899999999999999999987
No 122
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.37 E-value=2e-13 Score=118.65 Aligned_cols=53 Identities=17% Similarity=0.290 Sum_probs=48.8
Q ss_pred cCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCC
Q 005374 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTD 89 (699)
Q Consensus 37 ~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~------~~~~f~~I~~Ay~vL~d 89 (699)
.++|++|||++.|+.++||+|||+++++||||+|++ ++++|..|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999874 45679999999999974
No 123
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.37 E-value=9.8e-14 Score=130.42 Aligned_cols=102 Identities=10% Similarity=0.053 Sum_probs=80.3
Q ss_pred cCCCCcccc-c-CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccE
Q 005374 142 TSEDFPSIF-H-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (699)
Q Consensus 142 t~~nF~~~v-~-~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPT 219 (699)
+.++|+..+ + ++++++|.|||+||++|+.+.|.++++++.+++.+.++.||+++++. +|++++ |+++||
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~---~~~~~~------i~~~Pt 80 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPD---FNKMYE------LYDPCT 80 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT---TTTSSC------SCSSCE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHH---HHHHcC------CCCCCE
Confidence 456787766 4 68999999999999999999999999999998778999999996655 888888 779999
Q ss_pred EEEcCCCCCCCCc-----cccccCCcC-HHHHHHHHHHH
Q 005374 220 LVAFPPGCKSSDC-----MTRFEGELS-VDAVTDWFATA 252 (699)
Q Consensus 220 l~~f~~g~~~~~~-----~~~Y~G~rs-~~~Iv~fi~k~ 252 (699)
+++|.+|...... .....|... .+.+.+++.+.
T Consensus 81 ~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 81 VMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp EEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred EEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 9999888542000 002455554 78888888765
No 124
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.37 E-value=9.5e-14 Score=127.00 Aligned_cols=101 Identities=12% Similarity=0.136 Sum_probs=85.1
Q ss_pred eEEEe-cCCCCccccc----CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 137 ~V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
.|..| |.++|+..+. ++++++|.||++||++|+.+.|.|+++++.+. .+.+..||++++.. +|++++
T Consensus 17 ~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~---l~~~~~---- 88 (124)
T 1xfl_A 17 QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKS---VASDWA---- 88 (124)
T ss_dssp CCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHH---HHHHTT----
T ss_pred cEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHH---HHHHcC----
Confidence 46777 6688988884 58999999999999999999999999999986 46899999996554 999998
Q ss_pred cccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|.. ...+.| .+.+.|.+++.+.
T Consensus 89 --v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 89 --IQAMPTFMFLKEGKI----LDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp --CCSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred --CCccCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHh
Confidence 669999999988853 245678 5899999999876
No 125
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.36 E-value=2e-13 Score=126.96 Aligned_cols=101 Identities=10% Similarity=0.157 Sum_probs=81.9
Q ss_pred cceEEEecCCCCcccccC---CCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 135 VHAFNVVTSEDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 135 ~~~V~~Lt~~nF~~~v~~---~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
+..|..||.++|.+.|.. +++++|.||||||++|+.+.|.|+++|+.+. .+.|+.||++++. ++++
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~------~~~~---- 77 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI------EHYH---- 77 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC------SSCC----
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc------ccCC----
Confidence 445788999999988842 3689999999999999999999999999884 4689999999432 4455
Q ss_pred cccccccEEEEcCCCCCCCCccccccCCc-------CHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGEL-------SVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G~r-------s~~~Iv~fi~k~ 252 (699)
|+++||+++|.+|... ..+.|.. +.+.|..++.+.
T Consensus 78 --i~~~Pt~~~~~~G~~v----~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 78 --DNCLPTIFVYKNGQIE----GKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp --SSCCSEEEEESSSSCS----EEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred --CCCCCEEEEEECCEEE----EEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 7899999999988643 4555654 788899999876
No 126
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.35 E-value=1.6e-13 Score=122.68 Aligned_cols=102 Identities=16% Similarity=0.170 Sum_probs=85.2
Q ss_pred eEEEe-cCCCCccccc----CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 137 ~V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
.|..+ +.++|+..+. .+++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++. ++++++
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~---~~~~~~---- 78 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKD---VAEAYN---- 78 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHH---HHHHTT----
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHH---HHHHcC----
Confidence 45667 4688988884 38899999999999999999999999999986 46899999996554 899998
Q ss_pred cccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|+++||+++|++|.. ...+.| .+.+.|.+++.+.+
T Consensus 79 --v~~~Pt~~~~~~g~~----~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 79 --VEAMPTFLFIKDGEK----VDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp --CCSBSEEEEEETTEE----EEEEES-CCHHHHHHHHHHHH
T ss_pred --CCcCcEEEEEeCCeE----EEEecC-CCHHHHHHHHHHHh
Confidence 669999999988753 245678 58899999998874
No 127
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.35 E-value=1.5e-13 Score=134.64 Aligned_cols=67 Identities=16% Similarity=0.373 Sum_probs=60.7
Q ss_pred CCCCccCccccc------CcCC-CCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhcccCc
Q 005374 32 PRSFPPSHYDAL------GIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDV 98 (699)
Q Consensus 32 ~~~~~~d~Y~vL------gv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~~YD~ 98 (699)
......|||+|| |+++ +++.++||+|||+|+++||||+++++.+.|..|++||++|+||.+|+.||.
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~ 79 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYML 79 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence 445578999999 4654 899999999999999999999998888899999999999999999999997
No 128
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.35 E-value=1.7e-13 Score=133.07 Aligned_cols=62 Identities=11% Similarity=0.282 Sum_probs=57.2
Q ss_pred CcccccCcCCCC--CHHHHHHHHHHHHHhcCCCCCCCh--------HHHHHHHHHHHHHcCChhhhcccCcC
Q 005374 38 SHYDALGIKPYS--SVEQVKEAYEKFSSKWNSGEEIPS--------TADFLKIQYAYELLTDPLWKRNYDVY 99 (699)
Q Consensus 38 d~Y~vLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~--------~~~f~~I~~Ay~vL~d~~~R~~YD~~ 99 (699)
|||++|||++++ +.++||++||+|+++||||++++. .+.|..|++||++|+||.+|+.||..
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 73 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS 73 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 799999999999 999999999999999999987632 35799999999999999999999965
No 129
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.34 E-value=1.5e-13 Score=124.41 Aligned_cols=100 Identities=12% Similarity=0.047 Sum_probs=82.3
Q ss_pred EEEe--cCCCCcccc-cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 138 FNVV--TSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 138 V~~L--t~~nF~~~v-~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
|..+ +..+|.+.+ +++++++|.||++||++|+.+.|.|+++++.+ +.+.++.|||++++. +|++++ |
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~---~~~~~~------i 74 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGN---AADAYG------V 74 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHH---HHHHTT------C
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHH---HHHhcC------C
Confidence 4556 567888655 67899999999999999999999999999998 567999999996655 899998 6
Q ss_pred ccccEEEEcCC----CCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 215 RGLPSLVAFPP----GCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 215 ~gyPTl~~f~~----g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+++||+++|.+ |.. ...+.|..+. .|.+.+.+.
T Consensus 75 ~~~Pt~~~~~~~~~~G~~----~~~~~G~~~~-~l~~~~~~~ 111 (118)
T 2f51_A 75 SSIPALFFVKKEGNEIKT----LDQFVGADVS-RIKADIEKF 111 (118)
T ss_dssp CSSSEEEEEEEETTEEEE----EEEEESCCHH-HHHHHHHHH
T ss_pred CCCCEEEEEeCCCCcceE----EEeecCCCHH-HHHHHHHHh
Confidence 69999999987 543 3457787754 588888877
No 130
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.34 E-value=2.2e-13 Score=126.19 Aligned_cols=103 Identities=10% Similarity=0.137 Sum_probs=83.7
Q ss_pred ceEEEecC-CCCccccc--CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 136 HAFNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 136 ~~V~~Lt~-~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
..|..++. ++|+..+. .+++++|.|||+||++|+.+.|.|+++++.+ .+.++.||++++.. +|++++
T Consensus 20 ~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~---l~~~~~----- 89 (133)
T 3cxg_A 20 SIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPK---LNDQHN----- 89 (133)
T ss_dssp EEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHH---HHHHTT-----
T ss_pred ccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHH---HHHhcC-----
Confidence 35788875 78888775 3579999999999999999999999998876 36899999996655 899998
Q ss_pred ccccccEEEEcC--CCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 213 FRRGLPSLVAFP--PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~--~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+++||+++|. +|... ....+.|. +.+.|.+++.+.
T Consensus 90 -v~~~Pt~~~~~~~~g~g~--~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 90 -IKALPTFEFYFNLNNEWV--LVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp -CCSSSEEEEEEEETTEEE--EEEEEESC-CHHHHHHHHHHH
T ss_pred -CCCCCEEEEEEecCCCeE--EEEEEcCC-CHHHHHHHHHHH
Confidence 67999999996 66411 12456787 899999999887
No 131
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.33 E-value=2e-13 Score=124.43 Aligned_cols=102 Identities=13% Similarity=0.189 Sum_probs=84.9
Q ss_pred EEEe-cCCCCccccc----CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 138 FNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 138 V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
|..+ +.++|+..+. ++++++|.||++||++|+.+.|.|+++++.+. .+.+..|||+++.. ++++++
T Consensus 16 ~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~---~~~~~~----- 86 (130)
T 1wmj_A 16 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKE---VAEKYN----- 86 (130)
T ss_dssp SBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGG---GHHHHT-----
T ss_pred eEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHH---HHHHcC-----
Confidence 4556 4588988883 58899999999999999999999999999986 46899999996655 889988
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhc
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~ 254 (699)
|+++||+++|.+|... ..+.| .+.+.|.+++.+.+.
T Consensus 87 -v~~~Pt~~~~~~g~~~----~~~~g-~~~~~l~~~l~~~~~ 122 (130)
T 1wmj_A 87 -VEAMPTFLFIKDGAEA----DKVVG-ARKDDLQNTIVKHVG 122 (130)
T ss_dssp -CCSSCCCCBCTTTTCC----BCCCT-TCTTTHHHHHHHHTS
T ss_pred -CCccceEEEEeCCeEE----EEEeC-CCHHHHHHHHHHHHh
Confidence 6699999999888642 55678 588899999988743
No 132
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.33 E-value=1.2e-13 Score=122.49 Aligned_cols=101 Identities=13% Similarity=0.198 Sum_probs=84.4
Q ss_pred eEEEe-cCCCCccccc----CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 137 ~V~~L-t~~nF~~~v~----~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
.|..+ +.++|++.+. .+++++|.||++||++|+.+.|.++++++.+. .+.+..||+++++. ++++++
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~---~~~~~~---- 76 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKA---VAEEWN---- 76 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHH---HHHHHH----
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHH---HHHhCC----
Confidence 46677 5688988884 48899999999999999999999999999886 46899999996554 889888
Q ss_pred cccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++||+++|.+|.. ...+.| .+.+.|.+++.+.
T Consensus 77 --v~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 77 --VEAMPTFIFLKDGKL----VDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp --CSSTTEEEEEETTEE----EEEEEC-CCTTHHHHHHHHH
T ss_pred --CCcccEEEEEeCCEE----EEEEec-CCHHHHHHHHHHh
Confidence 669999999988753 245677 6889999999876
No 133
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.33 E-value=4.2e-13 Score=134.12 Aligned_cols=63 Identities=13% Similarity=0.150 Sum_probs=56.8
Q ss_pred ccCcccccCcCCC--CCHHHHHHHHHHHHHhcCCCCCCC--------hHHHHHHHHHHHHHcCChhhhcccCc
Q 005374 36 PPSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDV 98 (699)
Q Consensus 36 ~~d~Y~vLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~--------~~~~f~~I~~Ay~vL~d~~~R~~YD~ 98 (699)
..|||+||||++. ++.++||++||+|+++||||++++ +.++|..|++||++|+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5699999999986 789999999999999999998763 23569999999999999999999994
No 134
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.33 E-value=3.4e-13 Score=112.03 Aligned_cols=57 Identities=16% Similarity=0.067 Sum_probs=52.4
Q ss_pred cCcccccCcCC-CCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhhc
Q 005374 37 PSHYDALGIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKR 94 (699)
Q Consensus 37 ~d~Y~vLgv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d~~~R~ 94 (699)
.++|+||||++ +++.++||+|||+|+++||||++ ++.+.|.+|++||++|+++..|+
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~-g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG-GSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT-CCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHhhhhhcC
Confidence 58999999999 79999999999999999999996 67789999999999999987653
No 135
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.32 E-value=3.3e-10 Score=126.60 Aligned_cols=320 Identities=12% Similarity=0.169 Sum_probs=202.6
Q ss_pred EEEe-cCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVV-TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~L-t~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
+..+ +.+++++.+..+.+++|-||.++|.. ....|.++|..+.+...|+.++-. . ++++++ |..
T Consensus 112 ~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~---~~~~f~~~a~~~~~~~~F~~~~~~---~---~~~~~~------v~~ 176 (481)
T 3f8u_A 112 SVPLRTEEEFKKFISDKDASIVGFFDDSFSE---AHSEFLKAASNLRDNYRFAHTNVE---S---LVNEYD------DNG 176 (481)
T ss_dssp EEEECSHHHHHHHTTSSSCEEEEEESCTTCH---HHHHHHHHHHHHTTTSCEEEECCH---H---HHHHHC------SSS
T ss_pred ceecCCHHHHHHHHhcCCcEEEEEECCCccc---hHHHHHHHHHHhccCceEEEECCH---H---HHHHhC------CCC
Confidence 4566 55678877888899999999987654 478999999999888889877643 3 788888 557
Q ss_pred ccEEEEcCCCCC---CCCcccccc-CCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcCC-CCC
Q 005374 217 LPSLVAFPPGCK---SSDCMTRFE-GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT-GER 291 (699)
Q Consensus 217 yPTl~~f~~g~~---~~~~~~~Y~-G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~-~~~ 291 (699)
.| |++|++... .-.....|. |..+.+.|.+|+... .+|....++..+ ...+.. ....++++... .+.
T Consensus 177 ~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~--~~p~v~e~t~~n-~~~~~~----~~~~v~~~~~~~~~~ 248 (481)
T 3f8u_A 177 EG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN--IFGICPHMTEDN-KDLIQG----KDLLIAYYDVDYEKN 248 (481)
T ss_dssp EE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHH--TTTTSCEECTTT-HHHHTT----SSEEEEEECCCTTTC
T ss_pred Cc-EEEEecccccCccCCcccccCCCCCCHHHHHHHHHHh--CCCCccccChhH-HHHhcC----CCceEEEEecccccc
Confidence 66 777773210 001346788 889999999999988 578777777655 444442 22334444321 111
Q ss_pred c------hHHHHHHHHhccCC---ceEEEEEccccccHhHHhhcCCC----CCCEEEEEcCCCCCceeecCCCChh--HH
Q 005374 292 A------SPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVE----SAPAIVFLKDPGVKPVVYYGSFNNS--RL 356 (699)
Q Consensus 292 ~------~~~~~~~A~~~~~~---~~Fg~V~~~~~~s~~l~~kf~V~----~~PtIvlfk~~~~~pv~y~g~~~~~--~L 356 (699)
. ...++.+|.+|++. +.|+.+... +.....+.||+. ..|.|+++...+ ....+.++++.+ .|
T Consensus 249 ~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~--~~~~~l~~~gl~~~~~~~P~~~i~~~~~-~ky~~~~~~t~e~~~l 325 (481)
T 3f8u_A 249 AKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKG-EKFVMQEEFSRDGKAL 325 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCTTCSCEEEEECSSS-CEEECCSCCCTTSHHH
T ss_pred hhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHH--HHHHHHHHcCCCcccCCCcEEEEEcCCC-cccCCCcccCccHHHH
Confidence 1 12345688899888 999987632 235678899997 589999997433 333456778888 99
Q ss_pred HHHHHHhhccc--cccCCcc-----ccccccccchhhhhhccCcCCCCCCCCCccceEEEEEec-cCChhHHHHHHHHHH
Q 005374 357 SEVMEQNKLQG--LYFCGTC-----VSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAG-RLSPELNKMRETIRR 428 (699)
Q Consensus 357 ~~fi~~~~~~~--~~~~~~~-----~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~-~~~~~~~~~~~~lr~ 428 (699)
.+|++...-.. ....+.. -..+..++..+..+..-. .++ ..+|.+- .--..=..+...+.+
T Consensus 326 ~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~------~~k-----~vlv~f~a~wC~~C~~~~p~~~~ 394 (481)
T 3f8u_A 326 ERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNN------ENK-----DVLIEFYAPWCGHCKNLEPKYKE 394 (481)
T ss_dssp HHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTC------TTC-----EEEEEEECTTBHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhc------CCC-----cEEEEEecCcChhHHHhhHHHHH
Confidence 99998643221 0111111 112334455554443321 123 3444443 323334556666777
Q ss_pred HHHhhccCcccccccccccchhHHHhcCCC-eEEEEEEeCcchHHHHHHhccccccccccCCcCCCCCCCeEEEEEeecC
Q 005374 429 VQETLLSDDESNAADTDQSLAPAAVAFRNK-RLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRYKRN 507 (699)
Q Consensus 429 ~a~~l~~~~~~~~~~~~~~~~~~a~~~k~~-~l~F~wvd~~~q~~f~~~fl~~~~~~~~c~~~~~~~~~p~lvI~~~rr~ 507 (699)
+++ .+++. .+.|+.||.+.. +++. +......|.++++ +
T Consensus 395 l~~----------------------~~~~~~~v~~~~id~~~~-~~~~--------------~~~v~~~Pt~~~~----~ 433 (481)
T 3f8u_A 395 LGE----------------------KLSKDPNIVIAKMDATAN-DVPS--------------PYEVRGFPTIYFS----P 433 (481)
T ss_dssp HHH----------------------HTTTCSSEEEEEEETTSS-CCCT--------------TCCCCSSSEEEEE----C
T ss_pred HHH----------------------HhccCCCEEEEEEECCch-hhHh--------------hCCCcccCEEEEE----e
Confidence 777 56653 699999999754 2221 1245566999887 4
Q ss_pred CccccceeeccccccccccccccCCccccchhccCCCCChHHHHHHHHHHhc
Q 005374 508 TTEDEAKIERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQ 559 (699)
Q Consensus 508 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~ 559 (699)
...+ ++ ...|.|..+.++|.+||.+.+.
T Consensus 434 ~~~~-~~-----------------------~~~~~G~~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 434 ANKK-LN-----------------------PKKYEGGRELSDFISYLQREAT 461 (481)
T ss_dssp TTCT-TS-----------------------CEECCSCCSHHHHHHHHHHHCS
T ss_pred CCCe-Ee-----------------------eeEeCCCCCHHHHHHHHHHhcC
Confidence 3331 11 1146777788999999999887
No 136
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.32 E-value=5.5e-13 Score=121.75 Aligned_cols=103 Identities=12% Similarity=0.167 Sum_probs=85.0
Q ss_pred EEecCCCCccccc----CCCcEEEEEeccCCCCCCCcchHH---HHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 139 NVVTSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 139 ~~Lt~~nF~~~v~----~~~~~lV~FYapwC~hCk~l~p~~---~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
..++..+|++.+. .+++++|.||++||++|+.+.|.+ +++++.+.+.+.+..|||+... ...+|++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~---- 83 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGE-GVELRKKYG---- 83 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTT-HHHHHHHTT----
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcc-hHHHHHHcC----
Confidence 4567889988873 688999999999999999999999 7888877766788999998421 234899998
Q ss_pred cccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++||+++| ++|.. ...|.|..+.+.|.+|+.+.
T Consensus 84 --v~~~Pt~~~~d~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 84 --VHAYPTLLFINSSGEV----VYRLVGAEDAPELLKKVKLG 119 (130)
T ss_dssp --CCSSCEEEEECTTSCE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHH
Confidence 6699999999 56653 35678999999999999887
No 137
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.31 E-value=4.5e-13 Score=119.86 Aligned_cols=55 Identities=9% Similarity=-0.003 Sum_probs=49.7
Q ss_pred ccCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCC--C--------hHHHHHHHHHHHHHcCChh
Q 005374 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--P--------STADFLKIQYAYELLTDPL 91 (699)
Q Consensus 36 ~~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~--------~~~~f~~I~~Ay~vL~d~~ 91 (699)
..|||+|||++. |+.++||+|||+|+++||||+++ + ++++|+.|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 569999999996 99999999999999999999875 2 3678999999999999985
No 138
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.31 E-value=2e-13 Score=137.75 Aligned_cols=101 Identities=16% Similarity=0.258 Sum_probs=83.5
Q ss_pred eEEEe-cCCCCccccc-C--CCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccc
Q 005374 137 AFNVV-TSEDFPSIFH-D--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (699)
Q Consensus 137 ~V~~L-t~~nF~~~v~-~--~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f 212 (699)
.|..| +.++|...|. + +++++|.||+|||++|+.+.|.|+++|..+. .+.|++|||+ ++. +|++|+
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~---l~~~~~----- 169 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTG---AGDRFS----- 169 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHT---CSTTSC-----
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHH---HHHHCC-----
Confidence 47888 8899999883 3 3899999999999999999999999999884 5699999998 433 788887
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCH-------HHHHHHHHHH
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSV-------DAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~-------~~Iv~fi~k~ 252 (699)
|+++|||++|.+|.. ...|.|..+. +.|..|+.+.
T Consensus 170 -i~~~PTl~~~~~G~~----v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 170 -SDVLPTLLVYKGGEL----ISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp -GGGCSEEEEEETTEE----EEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred -CCCCCEEEEEECCEE----EEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 779999999998854 2456776664 8888888765
No 139
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.30 E-value=3.3e-12 Score=107.39 Aligned_cols=82 Identities=13% Similarity=0.097 Sum_probs=71.2
Q ss_pred CcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCcc
Q 005374 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (699)
Q Consensus 154 ~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~ 233 (699)
.+.+|.||++||++|+++.|.++++++++.+.+.+..||+++++. ++++++ |+++||+++ +|. .
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v~~~Pt~~~--~G~-----~ 66 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQ---KAMEYG------IMAVPTIVI--NGD-----V 66 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCC---TTTSTT------TCCSSEEEE--TTE-----E
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHH---HHHHCC------CcccCEEEE--CCE-----E
Confidence 467999999999999999999999999998777999999996655 888888 679999998 663 2
Q ss_pred ccccCCcCHHHHHHHHHHH
Q 005374 234 TRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 234 ~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.+.|..+.+.|.+|+.+.
T Consensus 67 -~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 67 -EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp -ECCSSSSSHHHHHHHHHH
T ss_pred -eeecCCCHHHHHHHHHHh
Confidence 678989999999999765
No 140
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.29 E-value=4.6e-12 Score=106.45 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=70.9
Q ss_pred cEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccc
Q 005374 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (699)
Q Consensus 155 ~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~ 234 (699)
+.+|.||++||++|+++.|.++++++.+.+.+.+..||+++++. ++++++ |+++||+++ +|. .
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v~~~Pt~~~--~G~-----~- 65 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDRE---KAIEYG------LMAVPAIAI--NGV-----V- 65 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGG---GGGGTC------SSCSSEEEE--TTT-----E-
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHH---HHHhCC------ceeeCEEEE--CCE-----E-
Confidence 46899999999999999999999999998778999999996655 888888 669999998 663 2
Q ss_pred cccCCcCHHHHHHHHHHH
Q 005374 235 RFEGELSVDAVTDWFATA 252 (699)
Q Consensus 235 ~Y~G~rs~~~Iv~fi~k~ 252 (699)
.+.|..+.+.|.+|+.+.
T Consensus 66 ~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 66 RFVGAPSREELFEAINDE 83 (85)
T ss_dssp EEECSSCCHHHHHHHHHH
T ss_pred EEccCCCHHHHHHHHHHH
Confidence 578988999999999876
No 141
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.26 E-value=9e-13 Score=135.34 Aligned_cols=102 Identities=17% Similarity=0.253 Sum_probs=82.7
Q ss_pred ceEEEe-cCCCCccccc---CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcc
Q 005374 136 HAFNVV-TSEDFPSIFH---DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (699)
Q Consensus 136 ~~V~~L-t~~nF~~~v~---~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~ 211 (699)
..|..| +..+|...|. .+++++|.||||||++|+.+.|.|+++|..+.+ +.|++|||++ ..+|.+|+
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~----~~l~~~~~---- 182 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN----TGAGDRFS---- 182 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH----HCCTTSSC----
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc----HHHHHHCC----
Confidence 357888 7899999883 478999999999999999999999999999865 7999999984 33778887
Q ss_pred cccccccEEEEcCCCCCCCCccccccC------C-cCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEG------E-LSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G------~-rs~~~Iv~fi~k~ 252 (699)
|.++||+++|.+|... ..+.| . ++.+.|..|+.+.
T Consensus 183 --I~~~PTll~~~~G~~v----~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 183 --SDVLPTLLVYKGGELL----SNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp --TTTCSEEEEEETTEEE----EEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred --CCCCCEEEEEECCEEE----EEEeCCcccccccccHHHHHHHHHHc
Confidence 7799999999988542 22223 2 5678888888776
No 142
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.24 E-value=7.4e-11 Score=126.79 Aligned_cols=203 Identities=9% Similarity=0.118 Sum_probs=145.7
Q ss_pred eEEEec-CCCCccccc-CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 137 AFNVVT-SEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 137 ~V~~Lt-~~nF~~~v~-~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
.|..|+ .++|++.+. ++.+++|.||++|| ....+.|.++|..+.+...+|.++.. . +|++++ |
T Consensus 124 ~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~---~~~~~~~~~~A~~~~~~~~f~~~~~~---~---~~~~~~------v 188 (350)
T 1sji_A 124 PVEIINSKLEVQAFERIEDQIKLIGFFKSEE---SEYYKAFEEAAEHFQPYIKFFATFDK---G---VAKKLS------L 188 (350)
T ss_dssp SEEECCSHHHHHHHHHCCSSCEEEEECSCTT---SHHHHHHHHHHHHTTTTSEEEEECCH---H---HHHHHT------C
T ss_pred cceeccchHHHHHHhccCCCcEEEEEECCCC---cHHHHHHHHHHHhhccCcEEEEECCH---H---HHHHcC------C
Confidence 356775 467887776 77899999999985 45578999999999888889988654 3 888888 7
Q ss_pred ccccEEEEcCCCCCCCCccccccCC-cCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcCCCC---
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE--- 290 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~-rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~--- 290 (699)
. +|+|++|+++.. .+..|.|. ++.++|.+|+... ..|.+..++.++ +..+..+ +.....+++|.....
T Consensus 189 ~-~p~i~~~~~~~~---~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~-~~~~~~~l~f~~~~~~~~ 260 (350)
T 1sji_A 189 K-MNEVDFYEPFMD---EPIAIPDKPYTEEELVEFVKEH--QRPTLRRLRPED-MFETWED-DLNGIHIVAFAERSDPDG 260 (350)
T ss_dssp C-TTCEEEECTTCS---SCEECSSSSCCHHHHHHHHHHH--CCCSEEECCTTT-HHHHHHS-CSSSEEEEEECCTTSHHH
T ss_pred C-CCcEEEEeCCCC---CceecCCCCCCHHHHHHHHHHc--CccchhhcChhh-HHHHhcC-CCCCcEEEEEEcCCCccH
Confidence 7 999999997543 35789997 9999999999988 578777787666 4444432 111334455543211
Q ss_pred -CchHHHHHHHHhccC--CceEEEEEccccccHhHH----hhcCCC-CCCEEEEEcCCCCCcee--e---cCCCChhHHH
Q 005374 291 -RASPFVRQISRNYWA--YASFAFVLWREEESSIWW----NTFEVE-SAPAIVFLKDPGVKPVV--Y---YGSFNNSRLS 357 (699)
Q Consensus 291 -~~~~~~~~~A~~~~~--~~~Fg~V~~~~~~s~~l~----~kf~V~-~~PtIvlfk~~~~~pv~--y---~g~~~~~~L~ 357 (699)
.....++.+|.++++ .+.|+.+.... ...++ +.||+. .+|+|++++........ + .+.++.+.|.
T Consensus 261 ~~~~~~~~~vA~~~~~~~~~~f~~id~~~--~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 338 (350)
T 1sji_A 261 YEFLEILKQVARDNTDNPDLSIVWIDPDD--FPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELE 338 (350)
T ss_dssp HHHHHHHHHHHHHGGGCSSCCEEEECGGG--CHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEECchh--hHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHH
Confidence 124555678999976 88899886432 34456 889998 48999999763222222 2 2478889999
Q ss_pred HHHHHhh
Q 005374 358 EVMEQNK 364 (699)
Q Consensus 358 ~fi~~~~ 364 (699)
+|++...
T Consensus 339 ~F~~d~~ 345 (350)
T 1sji_A 339 DWIEDVL 345 (350)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998754
No 143
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.24 E-value=2.3e-12 Score=129.62 Aligned_cols=99 Identities=12% Similarity=0.118 Sum_probs=83.5
Q ss_pred EEEecCCCCcccccCCCcE-EEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~-lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
+..|+.++|+..+..++++ +|.||+|||++|+++.|.|++++..+ +.+.++.|||++++. +|++++ |++
T Consensus 120 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~~---l~~~~~------v~~ 189 (229)
T 2ywm_A 120 KPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQD---LAEQFQ------VVG 189 (229)
T ss_dssp CCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCHH---HHHHTT------CCS
T ss_pred ccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCHH---HHHHcC------Ccc
Confidence 4668888898877655555 88999999999999999999999998 456999999996655 999998 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
+||+++ +|. ...|.|.++.+.|.+|+.+.+
T Consensus 190 ~Pt~~~--~G~-----~~~~~G~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 190 VPKIVI--NKG-----VAEFVGAQPENAFLGYIMAVY 219 (229)
T ss_dssp SSEEEE--GGG-----TEEEESCCCHHHHHHHHHHHH
T ss_pred cCEEEE--CCE-----EEEeeCCCCHHHHHHHHHHHh
Confidence 999998 664 245899999999999998773
No 144
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.24 E-value=2.1e-12 Score=119.46 Aligned_cols=103 Identities=16% Similarity=0.249 Sum_probs=82.4
Q ss_pred ecCCCCccccc--CCCcEEEEEeccCCCCCCCcchHH---HHHHHHhhcccceeeeeccch-hhhhHHHHhCCCCccccc
Q 005374 141 VTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDI-RLATHLAERKPIGQIFFR 214 (699)
Q Consensus 141 Lt~~nF~~~v~--~~~~~lV~FYapwC~hCk~l~p~~---~~~A~~L~g~~~va~Vdc~~~-~~~~~L~~k~~i~~~f~V 214 (699)
.+.++|+..+. .++++||.||++||++|+.+.|.+ +++++.+.+ +.+..|||+.+ .....+|++++ |
T Consensus 17 ~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~------v 89 (134)
T 2fwh_A 17 KTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLN------V 89 (134)
T ss_dssp CSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTT------C
T ss_pred cCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcC------C
Confidence 34556766663 488999999999999999999999 999999876 78999999532 23445999998 6
Q ss_pred ccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 215 RGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 215 ~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.++||+++| ++|... ....|.|..+.+.|.+++.+.
T Consensus 90 ~~~Pt~~~~d~~G~~v--~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 90 LGLPTILFFDGQGQEH--PQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp CSSSEEEEECTTSCBC--GGGCBCSCCCHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCCEe--eeeeeeeccCHHHHHHHHHhc
Confidence 699999999 777531 114689999999999999875
No 145
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.24 E-value=7.8e-11 Score=127.74 Aligned_cols=207 Identities=10% Similarity=0.075 Sum_probs=146.3
Q ss_pred eEEEec-CCCCccccc-CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc
Q 005374 137 AFNVVT-SEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (699)
Q Consensus 137 ~V~~Lt-~~nF~~~v~-~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V 214 (699)
.|..++ .++|++.+. ++++++|.||++||+ ...+.|.++|..+.+...||.+++. . +|++++ |
T Consensus 126 ~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~~~---~---~~~~~~------v 190 (367)
T 3us3_A 126 PVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATFDS---K---VAKKLT------L 190 (367)
T ss_dssp SEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEECCH---H---HHHHHT------C
T ss_pred CcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEECCH---H---HHHHcC------C
Confidence 366775 477888886 779999999999865 5678999999999988899998765 3 888888 5
Q ss_pred ccccEEEEcCCCCCCCCccccccCC-cCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcCCC----
Q 005374 215 RGLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTG---- 289 (699)
Q Consensus 215 ~gyPTl~~f~~g~~~~~~~~~Y~G~-rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~---- 289 (699)
++ |+|++|+++.. .+..|.|. ++.+.|.+|+... ..|.+..++.++ +...+.+.. ....+++|.+..
T Consensus 191 ~~-p~i~lf~~~~~---~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~~~-~~~~~~~f~~~~~~~~ 262 (367)
T 3us3_A 191 KL-NEIDFYEAFME---EPVTIPDKPNSEEEIVNFVEEH--RRSTLRKLKPES-MYETWEDDM-DGIHIVAFAEEADPDG 262 (367)
T ss_dssp CT-TCEEEECTTCS---SCEECSSSSCCHHHHHHHHHHT--CSCSEEECCGGG-HHHHHHSCB-TTEEEEEECCTTSHHH
T ss_pred CC-CeEEEEcCCCC---CCeecCCCCCCHHHHHHHHHHc--CccceeecChhh-HHHHHhhcc-CCcEEEEEEcCCChhH
Confidence 45 99999998643 35789995 9999999999988 578777777665 333333211 223444454321
Q ss_pred CCchHHHHHHHHhccC--CceEEEEEcccccc--HhHHhhcCCC-CCCEEEEEcCCCCC--ceeec---CCCChhHHHHH
Q 005374 290 ERASPFVRQISRNYWA--YASFAFVLWREEES--SIWWNTFEVE-SAPAIVFLKDPGVK--PVVYY---GSFNNSRLSEV 359 (699)
Q Consensus 290 ~~~~~~~~~~A~~~~~--~~~Fg~V~~~~~~s--~~l~~kf~V~-~~PtIvlfk~~~~~--pv~y~---g~~~~~~L~~f 359 (699)
......++.+|..|++ ++.|+.+....... +.+.+.||+. .+|+++++...... ...+. +.++.+.|.+|
T Consensus 263 ~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F 342 (367)
T 3us3_A 263 YEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDW 342 (367)
T ss_dssp HHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHH
Confidence 1123445679999998 69999986543211 1134569997 69999999864431 22233 36899999999
Q ss_pred HHHhhcc
Q 005374 360 MEQNKLQ 366 (699)
Q Consensus 360 i~~~~~~ 366 (699)
++...-.
T Consensus 343 ~~~~~~G 349 (367)
T 3us3_A 343 LEDVLEG 349 (367)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9876544
No 146
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.24 E-value=8.2e-13 Score=118.14 Aligned_cols=78 Identities=10% Similarity=-0.006 Sum_probs=62.1
Q ss_pred CCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccch-h--hhhHHHHhCCCCcccccccccEEEEcCCCCCC
Q 005374 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI-R--LATHLAERKPIGQIFFRRGLPSLVAFPPGCKS 229 (699)
Q Consensus 153 ~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~-~--~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~ 229 (699)
+++.+|.||||||++|+++.|.|+++++.+. .|||+.+ . ....+|++++ |+++||+++ +|
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~------V~~~PT~~i--~G--- 74 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAG------ITSYPTWII--NG--- 74 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTT------CCSSSEEEE--TT---
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcC------CeEeCEEEE--CC---
Confidence 4567899999999999999999999986553 6777721 0 2334999998 779999887 55
Q ss_pred CCccccccCCcCHHHHHHHHHH
Q 005374 230 SDCMTRFEGELSVDAVTDWFAT 251 (699)
Q Consensus 230 ~~~~~~Y~G~rs~~~Iv~fi~k 251 (699)
..|.|.++.+.|.+|+.-
T Consensus 75 ----~~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 75 ----RTYTGVRSLEALAVASGY 92 (106)
T ss_dssp ----EEEESCCCHHHHHHHHTC
T ss_pred ----EEecCCCCHHHHHHHhCC
Confidence 248999999999999853
No 147
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.23 E-value=5.5e-12 Score=115.82 Aligned_cols=92 Identities=18% Similarity=0.294 Sum_probs=74.8
Q ss_pred cCCCcEEEEEeccCCCCCCCcchHHH--HHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccc---ccccEEEEc-C
Q 005374 151 HDSKPWLIQVYSDGSYLCGQFSGAWK--TIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR---RGLPSLVAF-P 224 (699)
Q Consensus 151 ~~~~~~lV~FYapwC~hCk~l~p~~~--~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V---~gyPTl~~f-~ 224 (699)
..+++++|.||++||++|+.+.|.|+ +++..+.+.+.+..||++.......++++++ | .++||+++| +
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~------v~~~~~~Pt~~~~d~ 100 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYG------DPIQDGIPAVVVVNS 100 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTT------CGGGGCSSEEEEECT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhC------CccCCccceEEEECC
Confidence 36899999999999999999999999 9999997778999999922113344999998 6 799999999 7
Q ss_pred CCCCCCCccccccC-------CcCHHHHHHHHHHH
Q 005374 225 PGCKSSDCMTRFEG-------ELSVDAVTDWFATA 252 (699)
Q Consensus 225 ~g~~~~~~~~~Y~G-------~rs~~~Iv~fi~k~ 252 (699)
+|.. ...+.| ..+.+.|.+|+.+.
T Consensus 101 ~G~~----~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 101 DGKV----RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp TSCE----EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCCE----EEEecCCcccccccCCHHHHHHHHHHh
Confidence 7753 245566 57889999998764
No 148
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.21 E-value=5.2e-12 Score=117.01 Aligned_cols=101 Identities=15% Similarity=0.216 Sum_probs=87.9
Q ss_pred EEEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc-
Q 005374 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG- 216 (699)
Q Consensus 138 V~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g- 216 (699)
|.++|.+||+..+.+..+++|.|||+ |+.|+.++|.++++|++++|.+.|++||.++++. ++++|| |++
T Consensus 8 v~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~---~a~~~g------i~~~ 77 (133)
T 2djk_A 8 IGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGA---HAGNLN------LKTD 77 (133)
T ss_dssp SEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGG---GTTTTT------CCSS
T ss_pred eeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHH---HHHHcC------CCcc
Confidence 57889999998888888999999999 8999999999999999999989999999996655 888988 668
Q ss_pred -ccEEEEcCC--CCCCCCcccccc--CCcCHHHHHHHHHHHh
Q 005374 217 -LPSLVAFPP--GCKSSDCMTRFE--GELSVDAVTDWFATAI 253 (699)
Q Consensus 217 -yPTl~~f~~--g~~~~~~~~~Y~--G~rs~~~Iv~fi~k~v 253 (699)
.||+++|.+ |.. ..+. |..+.+.|.+|+.+.+
T Consensus 78 ~iPtl~i~~~~~g~~-----~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 78 KFPAFAIQEVAKNQK-----FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp SSSEEEEECTTTCCB-----CCCCSSSCCCHHHHHHHHHHHH
T ss_pred cCCEEEEEecCcCcc-----cCCCCccccCHHHHHHHHHHHH
Confidence 999999987 432 2333 9999999999998874
No 149
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.83 E-value=1.4e-12 Score=119.13 Aligned_cols=100 Identities=16% Similarity=0.138 Sum_probs=78.4
Q ss_pred CCcccccCCCcEEEEEeccCCCCCCCcchHH---HHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEE
Q 005374 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLV 221 (699)
Q Consensus 145 nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~---~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~ 221 (699)
.+......++++||.|||+||++|+.+.|.+ +++++.+.+.+.+..||++.+ ....++++++ |.++||++
T Consensus 11 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~~~------v~~~Pt~~ 83 (130)
T 2lst_A 11 ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTP-EGQELARRYR------VPGTPTFV 83 (130)
Confidence 3444445788999999999999999999999 999998887678999999632 2234888888 77999999
Q ss_pred Ec--CCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 222 AF--PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 222 ~f--~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
+| .+|... ....+.|..+.+.|.+++.+.+
T Consensus 84 ~~d~~~G~~~--~~~~~~G~~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 84 FLVPKAGAWE--EVGRLFGSRPRAEFLKELRQVC 115 (130)
Confidence 99 456420 0246789999999999998763
No 150
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.19 E-value=3e-12 Score=116.65 Aligned_cols=100 Identities=13% Similarity=0.085 Sum_probs=80.7
Q ss_pred eEEEecCCCCccccc--CCCcEEEEEecc-------CCCCCCCcchHHHHHHHHhhcccceeeeec-------cchhhhh
Q 005374 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSD-------GSYLCGQFSGAWKTIAALLEGIANTGMVEL-------GDIRLAT 200 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~--~~~~~lV~FYap-------wC~hCk~l~p~~~~~A~~L~g~~~va~Vdc-------~~~~~~~ 200 (699)
.|...+.++|...+. ++++++|.|||+ ||++|+.+.|.++++++.+.+.+.+..||+ +.+.
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~--- 82 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNN--- 82 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTC---
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhH---
Confidence 456778899998884 489999999999 999999999999999999876679999999 5443
Q ss_pred HHHHhCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHH
Q 005374 201 HLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (699)
Q Consensus 201 ~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~ 250 (699)
.++++++ |+++||+++|.++.. ...+.| .+.+.|.+|+.
T Consensus 83 ~~~~~~~------i~~~Pt~~~~~~~~~----~~g~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 83 DFRKNLK------VTAVPTLLKYGTPQK----LVESEC-LQANLVEMLFS 121 (123)
T ss_dssp HHHHHHC------CCSSSEEEETTSSCE----EEGGGG-GCHHHHHHHHH
T ss_pred HHHHHCC------CCeeCEEEEEcCCce----Eecccc-CCHHHHHHHHh
Confidence 3888888 779999999988643 233334 56778888875
No 151
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.19 E-value=1.6e-11 Score=125.77 Aligned_cols=85 Identities=14% Similarity=0.083 Sum_probs=73.2
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhh----cccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~----g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~ 227 (699)
.++++++.||||||+||+++.|.|+++|..+. +.+.++.|||++++. +|++++ |+++||+++ +|.
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~------V~~vPt~~i--~G~ 205 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPD---IADKYG------VMSVPSIAI--NGY 205 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHH---HHHHTT------CCSSSEEEE--TTE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHH---HHHHcC------CeeeCeEEE--CCE
Confidence 46688999999999999999999999999983 456899999996655 889988 779999988 663
Q ss_pred CCCCccccccCCcCHHHHHHHHHHHh
Q 005374 228 KSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 228 ~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
..|.|.++.+.|++|+.+.+
T Consensus 206 ------~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 206 ------LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp ------EEEESCCCHHHHHHHHHHHH
T ss_pred ------EEEeCCCCHHHHHHHHHHHh
Confidence 24899999999999999873
No 152
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.17 E-value=5.3e-10 Score=114.72 Aligned_cols=203 Identities=12% Similarity=0.190 Sum_probs=144.4
Q ss_pred EEEecC-CCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~Lt~-~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
|.+|+. +.++..+.++++++|-||++| |....+.|.++|..+.+...||.+.-. . ++++++ |.+
T Consensus 8 v~~l~s~~~~~~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~~~---~---v~~~~~------~~~ 72 (252)
T 2h8l_A 8 SVPLRTEEEFKKFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTNVE---S---LVNEYD------DNG 72 (252)
T ss_dssp EEECCSHHHHHHHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEECCH---H---HHHHHC------SSS
T ss_pred ceeecCHHHHHHHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEChH---H---HHHHhC------CCC
Confidence 677854 455666788889999999998 456778999999999888888888532 3 788888 557
Q ss_pred ccEEEEcCCCCCC---CCccccc-cCCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcCCCCC-
Q 005374 217 LPSLVAFPPGCKS---SDCMTRF-EGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER- 291 (699)
Q Consensus 217 yPTl~~f~~g~~~---~~~~~~Y-~G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~- 291 (699)
|+|++|+++... -.....| .|.++.+.|.+|+... .+|.+..++.++ ...+. + ..+.++++....+.
T Consensus 73 -p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~--~~Plv~e~t~~n-~~~~~-~---~~~~v~~~~~~~~~~ 144 (252)
T 2h8l_A 73 -EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN--IFGICPHMTEDN-KDLIQ-G---KDLLIAYYDVDYEKN 144 (252)
T ss_dssp -EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHH--SSCSSCEECTTT-HHHHS-S---SSEEEEEECCBTTTB
T ss_pred -CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhc--ccCCeeeccccc-Hhhhc-C---CCeEEEEeecchhhc
Confidence 999999864210 0134679 9999999999999998 578887787766 44442 2 22445555321111
Q ss_pred ------chHHHHHHHHhccCC---ceEEEEEccccccHhHHhhcCC--C--CCCEEEEEcCCCCCceeecCCCChhH--H
Q 005374 292 ------ASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEV--E--SAPAIVFLKDPGVKPVVYYGSFNNSR--L 356 (699)
Q Consensus 292 ------~~~~~~~~A~~~~~~---~~Fg~V~~~~~~s~~l~~kf~V--~--~~PtIvlfk~~~~~pv~y~g~~~~~~--L 356 (699)
....++.+|..|+++ +.|+.+... ....+.+.||+ . ..|+|+++...+.+ ..+.++++.+. |
T Consensus 145 ~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~--~~~~~~~~fgl~~~~~~~P~v~i~~~~~~k-y~~~~~~t~~~~~i 221 (252)
T 2h8l_A 145 AKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKGEK-FVMQEEFSRDGKAL 221 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCSCSSCEEEEECTTSCE-EECCSCCCTTSHHH
T ss_pred chhHHHHHHHHHHHHHHccccCceEEEEEEchH--HHHHHHHHcCCCCccCCCCEEEEEeCcCcE-ecCCcccCcchHHH
Confidence 123345588999887 999998743 23568899999 3 48999999653333 33567788888 9
Q ss_pred HHHHHHhhcc
Q 005374 357 SEVMEQNKLQ 366 (699)
Q Consensus 357 ~~fi~~~~~~ 366 (699)
.+|++...-.
T Consensus 222 ~~F~~~~~~G 231 (252)
T 2h8l_A 222 ERFLQDYFDG 231 (252)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHCC
Confidence 9999886544
No 153
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.10 E-value=2.5e-11 Score=116.64 Aligned_cols=104 Identities=12% Similarity=0.098 Sum_probs=78.9
Q ss_pred EEecCCCCcccc----cCCCcEEEEEeccCCCCCCCcchHH---HHHHHHhhcccceeeeeccchhhhh-----------
Q 005374 139 NVVTSEDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLAT----------- 200 (699)
Q Consensus 139 ~~Lt~~nF~~~v----~~~~~~lV~FYapwC~hCk~l~p~~---~~~A~~L~g~~~va~Vdc~~~~~~~----------- 200 (699)
..++..+|++.+ ..++++||.|||+||++|+.+.+.. .++++.++..+.+..||++++...+
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchh
Confidence 446677887777 3789999999999999999985555 6666666656789999998554210
Q ss_pred -----------HH-HHhCCCCcccccccccEEEEc-CCCCCCCCccccccCCcC-HHHHHHHHHHH
Q 005374 201 -----------HL-AERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELS-VDAVTDWFATA 252 (699)
Q Consensus 201 -----------~L-~~k~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs-~~~Iv~fi~k~ 252 (699)
.+ +++++ |.++||+++| ++|... ..+.|..+ .+.+.+|+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~------v~~~Pt~~lid~~G~~~----~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFG------ANAQPFYVLIDNEGNPL----NKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHS------CCCSSEEEEECTTSCBS----SCCBCSCCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcC------CCCcceEEEECCCCCEE----eeccCCCCCHHHHHHHHHHH
Confidence 00 46666 7799999999 667543 55679998 99999999876
No 154
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.06 E-value=2.3e-11 Score=116.87 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=75.5
Q ss_pred CcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEc-C
Q 005374 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAF-P 224 (699)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f-~ 224 (699)
|......++++||.|||+||++|+.+.|.|+++++.....+.|..|||+++... ++.++++. ++++||+++| +
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~--~~~~~~~~----~~~~Pt~~~~d~ 112 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEP--KDEDFSPD----GGYIPRILFLDP 112 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSC--SCGGGCTT----CSCSSEEEEECT
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchH--HHHHhccc----CCcCCeEEEECC
Confidence 333345789999999999999999999999998877655568999999955331 56667643 4679999999 6
Q ss_pred CCCCCCCccccccC----------CcCHHHHHHHHHHHh
Q 005374 225 PGCKSSDCMTRFEG----------ELSVDAVTDWFATAI 253 (699)
Q Consensus 225 ~g~~~~~~~~~Y~G----------~rs~~~Iv~fi~k~v 253 (699)
+|... ..+.| ..+.+.|++++.+.+
T Consensus 113 ~G~~~----~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 113 SGKVH----PEIINENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp TSCBC----TTCCCTTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCCEE----EEEeCCCCccchhcccCCHHHHHHHHHHHH
Confidence 77543 34556 378999999998774
No 155
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.03 E-value=1.5e-10 Score=95.59 Aligned_cols=73 Identities=18% Similarity=0.186 Sum_probs=60.0
Q ss_pred EEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccccc
Q 005374 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (699)
Q Consensus 157 lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y 236 (699)
.|.||++||++|+.+.|.++++++.+.+.+.+..|| +. .++++++ |+++||+++ +|.. . +
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~---~~~~~~~------v~~~Pt~~~--~G~~-----~-~ 62 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EM---DQILEAG------LTALPGLAV--DGEL-----K-I 62 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SH---HHHHHHT------CSSSSCEEE--TTEE-----E-E
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CH---HHHHHCC------CCcCCEEEE--CCEE-----E-E
Confidence 589999999999999999999999998767888888 22 3888888 679999998 6642 2 2
Q ss_pred cCCc-CHHHHHHHH
Q 005374 237 EGEL-SVDAVTDWF 249 (699)
Q Consensus 237 ~G~r-s~~~Iv~fi 249 (699)
.|.. +.+.|.+|+
T Consensus 63 ~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 63 MGRVASKEEIKKIL 76 (77)
T ss_dssp CSSCCCHHHHHHHC
T ss_pred cCCCCCHHHHHHHh
Confidence 3887 899998875
No 156
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.01 E-value=2e-09 Score=110.34 Aligned_cols=203 Identities=13% Similarity=0.097 Sum_probs=139.2
Q ss_pred EEEecC-CCCcccccC-CCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 138 FNVVTS-EDFPSIFHD-SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 138 V~~Lt~-~nF~~~v~~-~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
|..|+. +++++.+++ +++++|-||+++ |....+.|.++|..|.+...+|.+.-. . ++++++ |.
T Consensus 8 v~~l~s~~~~~~~~~~~~~v~vVgff~~~---~~~~~~~F~~~A~~lr~~~~F~~t~~~---~---v~~~~~------v~ 72 (250)
T 3ec3_A 8 SKEILTLKQVQEFLKDGDDVVILGVFQGV---GDPGYLQYQDAANTLREDYKFHHTFST---E---IAKFLK------VS 72 (250)
T ss_dssp SEECCCHHHHHHHHHHCSSCEEEEECSCT---TCHHHHHHHHHHHHHTTTCCEEEECCH---H---HHHHHT------CC
T ss_pred ceecCCHHHHHHHHhcCCCeEEEEEEcCC---CchHHHHHHHHHHhhhcCcEEEEECcH---H---HHHHcC------CC
Confidence 466754 677777776 899999999987 457889999999999888889887533 3 777787 55
Q ss_pred cccEEEEcCCCCC---CCCcccccc--CCcCHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEc-CCC
Q 005374 216 GLPSLVAFPPGCK---SSDCMTRFE--GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFS-KTG 289 (699)
Q Consensus 216 gyPTl~~f~~g~~---~~~~~~~Y~--G~rs~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~-~~~ 289 (699)
+ |+|++|+++.. .-.....|. |.++.++|.+|+... .+|-+..++.++. .....+ ....++++. +..
T Consensus 73 ~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~--~~Plv~e~t~~n~-~~~~~~---~~l~~~~~~~d~~ 145 (250)
T 3ec3_A 73 L-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH--ALPLVGHRKTSND-AKRYSK---RPLVVVYYSVDFS 145 (250)
T ss_dssp S-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH--SSCTEEEECTTTH-HHHSCS---SSEEEEEECCCCS
T ss_pred C-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHc--CCCceeecCccch-hhhhcc---CccEEEEEecccc
Confidence 6 99999986310 001246788 589999999999998 6788877876663 333322 123333432 211
Q ss_pred CC-------chHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCC--C-CEEEEEcCCCCCceeec-CCCChhHHHH
Q 005374 290 ER-------ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--A-PAIVFLKDPGVKPVVYY-GSFNNSRLSE 358 (699)
Q Consensus 290 ~~-------~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~--~-PtIvlfk~~~~~pv~y~-g~~~~~~L~~ 358 (699)
.. ....++.+|..|+ ++.|+.+...+ .....+.||+.. . |.++++...+.+ ..+. ++++.+.|.+
T Consensus 146 ~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~--~~~~l~~fgl~~~~~~p~~~~~~~~~~k-y~~~~~~~t~~~i~~ 221 (250)
T 3ec3_A 146 FDYRTATQFWRNKVLEVAKDFP-EYTFAIADEED--YATEVKDLGLSESGGDVNAAILDESGKK-FAMEPEEFDSDALRE 221 (250)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTT--THHHHHHTTCSSCSCSCEEEEECTTSCE-EECCCCSCCHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHH--HHHHHHHcCCCccCCCcEEEEEcCCCce-ecCCcccCCHHHHHH
Confidence 11 1234456889999 89999986432 355678999974 3 577777644333 2233 6789999999
Q ss_pred HHHHhhcc
Q 005374 359 VMEQNKLQ 366 (699)
Q Consensus 359 fi~~~~~~ 366 (699)
|++...-.
T Consensus 222 Fv~~~~~G 229 (250)
T 3ec3_A 222 FVMAFKKG 229 (250)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHCC
Confidence 99875444
No 157
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.01 E-value=4.1e-11 Score=108.87 Aligned_cols=90 Identities=18% Similarity=0.193 Sum_probs=66.1
Q ss_pred CCCcEEEEEeccCCCCCCCcch----HHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSG----AWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p----~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~ 227 (699)
+....||.|||+||++|+.+.+ .|++.+.. . ...|.+||.+++.. ..++.+++ |.+.|||++|.+|.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~-~-~~~l~~vdv~~~~~-~~la~~~~------V~g~PT~i~f~~G~ 87 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEG-R-AAPVQRLQMRDPLP-PGLELARP------VTFTPTFVLMAGDV 87 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHH-H-HSCEEEEETTSCCC-TTCBCSSC------CCSSSEEEEEETTE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhc-c-cceEEEEECCCCCc-hhHHHHCC------CCCCCEEEEEECCE
Confidence 4578999999999999999864 33322221 1 14788999986531 23677776 77999999999886
Q ss_pred CCCCccccccCCcCHHHHHHHHHHHhc
Q 005374 228 KSSDCMTRFEGELSVDAVTDWFATAIL 254 (699)
Q Consensus 228 ~~~~~~~~Y~G~rs~~~Iv~fi~k~v~ 254 (699)
.. .+..|....+.+..|+.+.+.
T Consensus 88 ev----~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 88 ES----GRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp EE----EEEECCCCHHHHHHHHHHHHH
T ss_pred EE----eeecCCCCHHHHHHHHHHHHh
Confidence 43 577899999999999987643
No 158
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.98 E-value=4e-10 Score=106.80 Aligned_cols=98 Identities=18% Similarity=0.200 Sum_probs=76.8
Q ss_pred CCCcccc----cCCCcEEEEEe-ccCCCCCCCcchHH---HHHHHHhhcccceeeeeccchh--------hhhHHHHhCC
Q 005374 144 EDFPSIF----HDSKPWLIQVY-SDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIR--------LATHLAERKP 207 (699)
Q Consensus 144 ~nF~~~v----~~~~~~lV~FY-apwC~hCk~l~p~~---~~~A~~L~g~~~va~Vdc~~~~--------~~~~L~~k~~ 207 (699)
.+|.+.+ ..+++++|.|| |+||++|+.+.|.+ .++++.+...+.+..||+++.. ....++++|+
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~ 113 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK 113 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC
Confidence 3455555 25789999999 99999999999999 7887766555688899998542 2345899998
Q ss_pred CCcccccccccEEEEc-CCCCCCCCccccccCCc--CHHHHHHHHHHH
Q 005374 208 IGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (699)
Q Consensus 208 i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~r--s~~~Iv~fi~k~ 252 (699)
|.++||+++| ++|.. ...+ |.. +.+.+.+++.+.
T Consensus 114 ------v~~~Pt~~~~d~~G~~----~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 114 ------VTGFPELVFIDAEGKQ----LARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp ------CCSSSEEEEECTTCCE----EEEE-CCCTTCHHHHHHHHHHH
T ss_pred ------CCCCCEEEEEcCCCCE----EEEe-cCCCCCHHHHHHHHHHH
Confidence 6699999999 66753 3456 887 999999999876
No 159
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.96 E-value=8.8e-11 Score=105.69 Aligned_cols=100 Identities=11% Similarity=0.097 Sum_probs=79.2
Q ss_pred EEe-cCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhh-hHHHHhCCCCccccccc
Q 005374 139 NVV-TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRG 216 (699)
Q Consensus 139 ~~L-t~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~-~~L~~k~~i~~~f~V~g 216 (699)
..| |.++|++++.++++++|.|+|.|||.|+.+.|.+++++.. +.+.+..||.++++.. ..+|++++ |++
T Consensus 9 ~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~------V~h 80 (112)
T 3iv4_A 9 IKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTN------VKH 80 (112)
T ss_dssp EECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHT------CCC
T ss_pred eecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhC------Ccc
Confidence 455 4466888887799999999999999999999999999984 5579999999977553 33799998 775
Q ss_pred -ccEEEEcCCCCCCCCccccccCCcCHHHHHHHH
Q 005374 217 -LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWF 249 (699)
Q Consensus 217 -yPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi 249 (699)
.||+++|++|... ...-.|..+.+.|.+.+
T Consensus 81 ~sPq~il~k~G~~v---~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 81 ESPQAFYFVNGEMV---WNRDHGDINVSSLAQAE 111 (112)
T ss_dssp CSSEEEEEETTEEE---EEEEGGGCSHHHHHHHT
T ss_pred CCCeEEEEECCEEE---EEeeccccCHHHHHHhh
Confidence 9999999999642 22235777777776543
No 160
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.93 E-value=8.3e-10 Score=101.72 Aligned_cols=104 Identities=14% Similarity=0.119 Sum_probs=79.6
Q ss_pred EecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccch-----------------------
Q 005374 140 VVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----------------------- 196 (699)
Q Consensus 140 ~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~----------------------- 196 (699)
.++.+.+....-.+++++|.||++||++|+...|.++++++.+.+.+.|..|+++..
T Consensus 16 ~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 2b5x_A 16 WLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIF 95 (148)
T ss_dssp EESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEE
T ss_pred cccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceE
Confidence 345555443333678999999999999999999999999999977688888986521
Q ss_pred -hhhhHHHHhCCCCcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 197 -RLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 197 -~~~~~L~~k~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
.....+++.++ |.++||++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 96 ~d~~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 96 VDSDHALTDAFE------NEYVPAYYVFDKTGQL----RHFQAGGSGMKMLEKRVNRVL 144 (148)
T ss_dssp ECSSCHHHHHTC------CCCSSEEEEECTTCBE----EEEEESCSTTHHHHHHHHHHH
T ss_pred ECCchhHHHHhC------CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHHH
Confidence 11234788887 6799999999 56643 345789899999999998763
No 161
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.92 E-value=1.2e-09 Score=99.31 Aligned_cols=89 Identities=13% Similarity=0.087 Sum_probs=72.6
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhh-------------------hhHHHHhCCCCccc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-------------------ATHLAERKPIGQIF 212 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~-------------------~~~L~~k~~i~~~f 212 (699)
.+++++|.||++||++|+...|.++++++++. .+.+..|+++++.. ...++++++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----- 96 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYN----- 96 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTT-----
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcC-----
Confidence 57899999999999999999999999999997 56899999875210 234778887
Q ss_pred ccccccEEEEcC-CCCCCCCcccccc---CCcCHHHHHHHHHHH
Q 005374 213 FRRGLPSLVAFP-PGCKSSDCMTRFE---GELSVDAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~-~g~~~~~~~~~Y~---G~rs~~~Iv~fi~k~ 252 (699)
|.++|+++++. +|.. . .|. |..+.+.|.+++.+.
T Consensus 97 -i~~~P~~~lid~~G~i----~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 97 -VPWQPAFVFYRADGTS----T-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp -CCSSSEEEEECTTSCE----E-EECCSSSCCCHHHHHHHHHHC
T ss_pred -CCCCCEEEEECCCCcE----E-EEEcCCCccCHHHHHHHHHHH
Confidence 67999999994 5532 2 677 999999999999875
No 162
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.89 E-value=1.7e-09 Score=97.98 Aligned_cols=90 Identities=14% Similarity=0.003 Sum_probs=72.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchh--------------------hhhHHHHhCCCCcc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~--------------------~~~~L~~k~~i~~~ 211 (699)
.+++++|.||++||++|+...|.++++++.+. .+.+..|+++++. ....++++++
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 98 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFG---- 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTT----
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcC----
Confidence 57899999999999999999999999999987 5688999986421 1233677777
Q ss_pred cccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++|+++++..++.. . .|.|..+.+.|.+++.+.
T Consensus 99 --i~~~P~~~~id~~g~i---~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 99 --VTQQPAYAFVDPHGNV---D-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp --CCSSSEEEEECTTCCE---E-EEESCCCHHHHHHHHHHH
T ss_pred --CCCCceEEEECCCCCE---E-EEecCCCHHHHHHHHHHH
Confidence 7799999999543332 3 688999999999999876
No 163
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.88 E-value=2.3e-10 Score=120.03 Aligned_cols=76 Identities=11% Similarity=-0.001 Sum_probs=60.1
Q ss_pred EEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccch---hhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCc
Q 005374 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDC 232 (699)
Q Consensus 156 ~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~---~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~ 232 (699)
.+|+||||||+||++++|.|+++|+++ ..|||+.. .....+|++++ |+++||+++ +|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l------~~Vd~d~~d~~~~~~~la~~~g------I~~vPT~~i--~G------ 259 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV------PYVECSPNGPGTPQAQECTEAG------ITSYPTWII--NG------ 259 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS------CEEESCSSCSSSCCCHHHHTTT------CCSTTEEEE--TT------
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc------CEEEEeecCchhhHHHHHHHcC------CcccCeEEE--CC------
Confidence 479999999999999999999998655 36677621 11345999998 779999665 66
Q ss_pred cccccCCcCHHHHHHHHHHH
Q 005374 233 MTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 233 ~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
..|.|.++.++|.+|+.-+
T Consensus 260 -~~~~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 260 -RTYTGVRSLEALAVASGYP 278 (291)
T ss_dssp -EEEESCCCHHHHHHHTCCC
T ss_pred -EEecCCCCHHHHHHHHCCC
Confidence 2489999999999998543
No 164
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.87 E-value=9e-10 Score=103.95 Aligned_cols=101 Identities=16% Similarity=0.078 Sum_probs=74.7
Q ss_pred EEecCCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cce----------------------------e
Q 005374 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANT----------------------------G 189 (699)
Q Consensus 139 ~~Lt~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~v----------------------------a 189 (699)
..++.+.+......++++||.||++||++|+...|.+++++++++.. +.| .
T Consensus 24 ~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (164)
T 2h30_A 24 KTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKL 103 (164)
T ss_dssp EETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTS
T ss_pred CCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcc
Confidence 44555555433346789999999999999999999999999886432 123 2
Q ss_pred eeeccchhhhhHHHHhCCCCcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 190 MVELGDIRLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 190 ~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.++++.+ ..++++|+ |.++||++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 104 ~~~~d~~---~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 104 PVVTDNG---GTIAQNLN------ISVYPSWALIGKDGDV----QRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CEEECTT---CHHHHHTT------CCSSSEEEEECTTSCE----EEEEESCCCHHHHHHHHHCT
T ss_pred eEEEcCc---hHHHHHcC------CCccceEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 3444433 34888888 6799999999 66653 34578999999999999876
No 165
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.87 E-value=2.1e-09 Score=100.47 Aligned_cols=93 Identities=13% Similarity=0.026 Sum_probs=73.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhH---------------------HHHhCCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATH---------------------LAERKPIG 209 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~---------------------L~~k~~i~ 209 (699)
.++++||.||++||++|+...|.++++++++++. +.|..|+++....... +++.|+..
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 5789999999999999999999999999998554 4888999875433333 44444422
Q ss_pred cccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 210 QIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 210 ~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 103 ----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 103 ----VGVLPFTVVEAPKCGY----RQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp ----SCCSSEEEEEETTTTE----EEECCSCCCHHHHHHHHHHH
T ss_pred ----cCCCCEEEEECCCCcE----EEEECCCCCHHHHHHHHHHH
Confidence 7799999888 56643 35788999999999999876
No 166
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.85 E-value=1.8e-09 Score=99.04 Aligned_cols=88 Identities=9% Similarity=0.126 Sum_probs=71.1
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhh-cccceeeeeccchh----------------------hhhHHHHhCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-GIANTGMVELGDIR----------------------LATHLAERKPI 208 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~-g~~~va~Vdc~~~~----------------------~~~~L~~k~~i 208 (699)
.+++++|.||++||++|+...|.+.++++.+. ..+.|..|+++... ....+++.|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH- 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC-
Confidence 67899999999999999999999999999997 33588889886410 1224788888
Q ss_pred CcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHH
Q 005374 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWF 249 (699)
Q Consensus 209 ~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi 249 (699)
|.++|+++++ ++|.. ...|.|..+.+.|.+++
T Consensus 112 -----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 -----IITIPTSFLLNEKGEI----EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp -----CCEESEEEEECTTCCE----EEEEESCCCHHHHHHHH
T ss_pred -----cCccCeEEEEcCCCcE----EEEEcCCcCHHHHHHhh
Confidence 6799999999 66653 35678999999998876
No 167
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.81 E-value=3.4e-09 Score=99.89 Aligned_cols=98 Identities=10% Similarity=0.086 Sum_probs=73.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhh-hHHHHhCCCC-----------ccc------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-THLAERKPIG-----------QIF------ 212 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~-~~L~~k~~i~-----------~~f------ 212 (699)
.++++||.||++||++|+...|.+.++++.+.+. +.|..|++++.... ....+++++. +.|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 5789999999999999999999999999999876 58999999854331 1222222111 000
Q ss_pred ccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 213 FRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 213 ~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
.|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.+
T Consensus 113 ~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~l 150 (165)
T 3or5_A 113 GITGIPTSFVIDASGNV----SGVIVGPRSKADFDRIVKMAL 150 (165)
T ss_dssp CSCSSSEEEEECTTSBE----EEEECSCCCHHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHH
Confidence 37799999888 55643 356789999999999998874
No 168
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.80 E-value=6.7e-08 Score=105.02 Aligned_cols=200 Identities=12% Similarity=0.107 Sum_probs=120.6
Q ss_pred EEEec-CCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~Lt-~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
|..++ .++|+. +..+..++|.||+++|.. ..+.|.++|..+.+...++.+.+. ++++++ |.+
T Consensus 120 v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~---~~~~f~~~A~~~~~~~~F~~~~~~-------~~~~~~------v~~ 182 (382)
T 2r2j_A 120 IQEIRDLAEITT-LDRSKRNIIGYFEQKDSD---NYRVFERVANILHDDCAFLSAFGD-------VSKPER------YSG 182 (382)
T ss_dssp CEEC-------------CCEEEEEESCSSSH---HHHHHHHHHHHHTTTCEEEEEESC-------C--------------
T ss_pred ceecCCHHHHHH-hcCCCCEEEEEECCCCCh---hHHHHHHHHHHhhccceEEEEehh-------hHHhhC------CCC
Confidence 45664 356777 667788999999987643 366899999999888788887774 455666 669
Q ss_pred ccEEEEcCCCCCCCCccccccCCc-CHHHHHHHHHHHhccCCcceecccchhhhhhhhhcCCCcEEEEEEcCCCCC-chH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEGEL-SVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER-ASP 294 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G~r-s~~~Iv~fi~k~v~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f~~~~~~-~~~ 294 (699)
+| +++++.+... ....|.|.+ +.+.|.+|+... ..|....++..+ +..++.. ...+.++++...+.. ...
T Consensus 183 ~p-i~~~~~~~~~--~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~--~~~~~v~f~~~~~~~~~~~ 254 (382)
T 2r2j_A 183 DN-IIYKPPGHSA--PDMVYLGAMTNFDVTYNWIQDK--CVPLVREITFEN-GEELTEE--GLPFLILFHMKEDTESLEI 254 (382)
T ss_dssp CE-EEEECSSSSS--CCEECCSCTTCHHHHHHHHHHH--HSCSSEECCHHH-HHHHHTT--CCCEEEEEECTTCCHHHHH
T ss_pred Cc-eEECCCCCCC--cCcccCCCCCCHHHHHHHHHhc--ccCceEecChhh-HHHHhcC--CCcEEEEEecCCchHHHHH
Confidence 99 7776654321 357899999 999999999988 478776677655 4444432 123444444432211 112
Q ss_pred HHH---HHHHhccCCceEEEEEccccccHhHHhhcCCC--CCCEEEEEcCCCCCceee---cCCCChhHHHHHHHHhhcc
Q 005374 295 FVR---QISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY---YGSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 295 ~~~---~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~--~~PtIvlfk~~~~~pv~y---~g~~~~~~L~~fi~~~~~~ 366 (699)
+.. ..+..+++.+.|+.+.... ...+++.||++ ..|+|+++.. ... ..| .+.++.+.|.+|++...-.
T Consensus 255 ~~~~~~~~~~~~~~~i~f~~id~~~--~~~~~~~~gl~~~~~P~i~i~~~-~~~-y~~~~~~~~~~~~~i~~F~~d~~~G 330 (382)
T 2r2j_A 255 FQNEVARQLISEKGTINFLHADCDK--FRHPLLHIQKTPADCPVIAIDSF-RHM-YVFGDFKDVLIPGKLKQFVFDLHSG 330 (382)
T ss_dssp HHHHHHHHTGGGTTTSEEEEEETTT--THHHHHHTTCCGGGCSEEEEECS-SCE-EECCCSGGGGSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCeeEEEEEchHH--hHHHHHHcCCCccCCCEEEEEcc-hhc-CCCCccccccCHHHHHHHHHHHHCC
Confidence 222 2344677889999987432 35688999997 4899998864 221 112 3445678899999875444
No 169
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.77 E-value=3.6e-09 Score=100.62 Aligned_cols=96 Identities=8% Similarity=0.058 Sum_probs=65.8
Q ss_pred CCcccc----cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhCCCCcccccccccE
Q 005374 145 DFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (699)
Q Consensus 145 nF~~~v----~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPT 219 (699)
+|+..+ .+++++||.|||+||++|+.+.|.+.+..+..+-. ..+..|+++.+.. .++.+++ |.++||
T Consensus 32 ~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~--~~~~~~~------v~~~PT 103 (151)
T 3ph9_A 32 TYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETT--DKNLSPD------GQYVPR 103 (151)
T ss_dssp SHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCS--CGGGCTT------CCCSSE
T ss_pred CHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCch--hhHhhcC------CCCCCE
Confidence 455554 37899999999999999999999998753221111 2677777763211 2456666 779999
Q ss_pred EEEcC-CCCCCCCccccccCC----------cCHHHHHHHHHHH
Q 005374 220 LVAFP-PGCKSSDCMTRFEGE----------LSVDAVTDWFATA 252 (699)
Q Consensus 220 l~~f~-~g~~~~~~~~~Y~G~----------rs~~~Iv~fi~k~ 252 (699)
+++|. +|... ....|. .+.+.|++.+++.
T Consensus 104 ~~f~~~~G~~v----~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 104 IMFVDPSLTVR----ADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp EEEECTTSCBC----TTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred EEEECCCCCEE----EEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 99998 66542 344565 4566777777765
No 170
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.75 E-value=1.3e-08 Score=93.75 Aligned_cols=91 Identities=8% Similarity=-0.045 Sum_probs=70.5
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhh-hhH---------------------HHHhCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-ATH---------------------LAERKPI 208 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~-~~~---------------------L~~k~~i 208 (699)
.+++++|.||++||++|+...|.+.++++.+.+. +.|..|+++++.. ... +++.|+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD- 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC-
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC-
Confidence 5789999999999999999999999999999876 5889999884322 112 455555
Q ss_pred CcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 209 ~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++|+++++ ++|.. ...+.|..+.+.+++.+.+.
T Consensus 109 -----i~~~P~~~lid~~G~i----~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 109 -----IYATPVLYVLDKNKVI----IAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp -----CCSSCEEEEECTTCBE----EEESCCGGGHHHHHHHHHHH
T ss_pred -----cCCCCEEEEECCCCcE----EEecCCHHHHHHHHHHHHHH
Confidence 7799999999 55643 34567887778887777654
No 171
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.73 E-value=1.9e-08 Score=93.52 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=74.0
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhh--------------------hhHHHHhCCCCc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIGQ 210 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~--------------------~~~L~~k~~i~~ 210 (699)
.+++++|.||++||++|+...|.++++++.+.+. +.|..|+++.+.. ...+++.++
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 105 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYL--- 105 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTT---
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcC---
Confidence 4689999999999999999999999999999764 5888999885431 014777777
Q ss_pred ccccccccEEEEcC-CCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 211 IFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 211 ~f~V~gyPTl~~f~-~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|.++|+++++. +|.. ...+.|..+.+.|.+++.+..
T Consensus 106 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~~ 142 (152)
T 2lja_A 106 ---INGIPRFILLDRDGKI----ISANMTRPSDPKTAEKFNELL 142 (152)
T ss_dssp ---CCSSCCEEEECTTSCE----EESSCCCTTCHHHHHHHHHHH
T ss_pred ---cCCCCEEEEECCCCeE----EEccCCCCCHHHHHHHHHHHh
Confidence 77999999997 5643 345678889999999998873
No 172
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.73 E-value=8.1e-09 Score=96.18 Aligned_cols=91 Identities=11% Similarity=0.183 Sum_probs=73.8
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhh-------------------hhHHHHhCCCCcc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------ATHLAERKPIGQI 211 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~-------------------~~~L~~k~~i~~~ 211 (699)
.+++++|.||++||++|+...|.+.++++.+.+. +.|..|++++... ...+++.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 100 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYD---- 100 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTT----
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcC----
Confidence 5689999999999999999999999999999764 5888898874321 124777777
Q ss_pred cccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 101 --v~~~P~~~lid~~G~i----~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 101 --VSPLPTTFLINPEGKV----VKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp --CCSSCEEEEECTTSEE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCcE----EEEEeCCCCHHHHHHHHHHH
Confidence 6799999988 56643 34577999999999999887
No 173
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.71 E-value=2e-08 Score=93.43 Aligned_cols=93 Identities=14% Similarity=-0.005 Sum_probs=71.6
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchh--------------------hhhHHHHhCCCCc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~--------------------~~~~L~~k~~i~~ 210 (699)
.+++++|.||++||++|+...|.+.++++.+.+. +.|..|+++.+. ....+++.++
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFG--- 103 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHT---
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcC---
Confidence 5789999999999999999999999999999864 456655532100 1223777777
Q ss_pred ccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHhc
Q 005374 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (699)
Q Consensus 211 ~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~ 254 (699)
|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.+.
T Consensus 104 ---i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 104 ---TQVYPTSVLIGKKGEI----LKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp ---CCSSSEEEEECSSSCC----CEEEESSCCHHHHHHHHHHHHH
T ss_pred ---CCccCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHHH
Confidence 6799999999 55643 3567899999999999988743
No 174
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.70 E-value=9.7e-09 Score=92.63 Aligned_cols=90 Identities=14% Similarity=0.045 Sum_probs=69.3
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccc------h-------------------hhhhHHHHhC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD------I-------------------RLATHLAERK 206 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~------~-------------------~~~~~L~~k~ 206 (699)
.+++++|.||++||++|+...|.++++++.+...+.+..|++.. . .....+++.+
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 57899999999999999999999999999876556677774321 0 0112367777
Q ss_pred CCCcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHH
Q 005374 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (699)
Q Consensus 207 ~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k 251 (699)
+ |.++|+++++ ++|.. ...|.|..+.+.|.+++.+
T Consensus 101 ~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 G------VRSYPTQAFIDKEGKL----VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp T------CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHH
T ss_pred C------cccCCeEEEECCCCcE----EEeecCCCcHHHHHHHHHh
Confidence 7 7799999999 56653 3567899999999998865
No 175
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.69 E-value=2.3e-08 Score=92.13 Aligned_cols=88 Identities=13% Similarity=0.046 Sum_probs=68.6
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHh-hcc-cceeeeeccchhh----------------------hhHHHHhCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L-~g~-~~va~Vdc~~~~~----------------------~~~L~~k~~ 207 (699)
.++++||.||++||++|+...|.+.++++.+ .+. +.|..|+++.... ...+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4689999999999999999999999999999 665 5888888875321 235788888
Q ss_pred CCcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 208 IGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 208 i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++|+++++ ++|.. .+... +.+.+.+++.+.
T Consensus 112 ------v~~~P~~~lid~~G~i------~~~~~-~~~~l~~~l~~l 144 (148)
T 3fkf_A 112 ------ILTLPTNILLSPTGKI------LARDI-QGEALTGKLKEL 144 (148)
T ss_dssp ------CCSSSEEEEECTTSBE------EEESC-CHHHHHHHHHHH
T ss_pred ------CCCcCEEEEECCCCeE------EEecC-CHHHHHHHHHHH
Confidence 6799999999 55642 22222 788888888765
No 176
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.69 E-value=8.9e-09 Score=92.15 Aligned_cols=78 Identities=14% Similarity=0.167 Sum_probs=66.2
Q ss_pred CcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCcc
Q 005374 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (699)
Q Consensus 154 ~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~ 233 (699)
...++.|++|||+.|+.+.|.+++++.++. +.+..||.++++. ++++|+ ++ +|+|++|.+|..
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~---l~~~yg------v~-VP~l~~~~dG~~----- 91 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEH---LTRLYN------DR-VPVLFAVNEDKE----- 91 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHH---HHHHST------TS-CSEEEETTTTEE-----
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHH---HHHHhC------CC-CceEEEEECCEE-----
Confidence 467999999999999999999999998874 6899999996655 888887 76 999999998852
Q ss_pred ccccCCcCHHHHHHHH
Q 005374 234 TRFEGELSVDAVTDWF 249 (699)
Q Consensus 234 ~~Y~G~rs~~~Iv~fi 249 (699)
.+.|..+.+.|.+|+
T Consensus 92 -v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 92 -LCHYFLDSDVIGAYL 106 (107)
T ss_dssp -EECSSCCCHHHHHHH
T ss_pred -EEecCCCHHHHHHHh
Confidence 246888999998886
No 177
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.69 E-value=1.5e-09 Score=105.62 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=60.2
Q ss_pred CCCcccccCCCcEEEEEeccCCCCCCCcch-HH--HHHHHHhhcccceeeeeccchhhhhHHHHhC--------CCCccc
Q 005374 144 EDFPSIFHDSKPWLIQVYSDGSYLCGQFSG-AW--KTIAALLEGIANTGMVELGDIRLATHLAERK--------PIGQIF 212 (699)
Q Consensus 144 ~nF~~~v~~~~~~lV~FYapwC~hCk~l~p-~~--~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~--------~i~~~f 212 (699)
+.|+.....++++||.|||+||+.|+.++| .| .++++.+.+.+.+.+||.++++. +++.+ +
T Consensus 30 ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~---l~~~y~~~~q~~~g----- 101 (173)
T 3ira_A 30 EAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPD---IDNIYMTVCQIILG----- 101 (173)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHH---HHHHHHHHHHHHHS-----
T ss_pred HHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCc---HHHHHHHHHHHHcC-----
Confidence 345555567899999999999999999999 44 57888887777889999996655 66665 6
Q ss_pred ccccccEEEEcC-CCC
Q 005374 213 FRRGLPSLVAFP-PGC 227 (699)
Q Consensus 213 ~V~gyPTl~~f~-~g~ 227 (699)
|.|+||+++|. +|.
T Consensus 102 -v~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 102 -RGGWPLNIIMTPGKK 116 (173)
T ss_dssp -CCCSSEEEEECTTSC
T ss_pred -CCCCcceeeECCCCC
Confidence 66999999996 554
No 178
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.67 E-value=2.1e-08 Score=93.15 Aligned_cols=91 Identities=12% Similarity=0.061 Sum_probs=71.2
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhh-------------------HHHHhCCCCcc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLAT-------------------HLAERKPIGQI 211 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~-------------------~L~~k~~i~~~ 211 (699)
.++++||.||++||++|+...|.+.++++.+.+. +.|..|+++.+.... .+++.|+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 102 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYG---- 102 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcC----
Confidence 5789999999999999999999999999999876 588888888543211 4667777
Q ss_pred cccccccEEEEc-CCCCCCCCccccccCCc--CHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~r--s~~~Iv~fi~k~ 252 (699)
|.++|+++++ ++|.. ...+.|.. +.+.|.+++.+.
T Consensus 103 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 103 --VKGMPTSFLIDRNGKV----LLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp --CCSSSEEEEECTTSBE----EEEEESCCTTTHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCCE----EEEEccCCCcCHHHHHHHHHHH
Confidence 7799998888 55643 24556744 558999999887
No 179
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.63 E-value=2.7e-08 Score=92.83 Aligned_cols=87 Identities=17% Similarity=0.128 Sum_probs=70.5
Q ss_pred CcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeecc---chh---------------------hhhHHHHhCCCC
Q 005374 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG---DIR---------------------LATHLAERKPIG 209 (699)
Q Consensus 154 ~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~---~~~---------------------~~~~L~~k~~i~ 209 (699)
++++|.||++||++|+...|.+.++++.+ .+.|..|+++ ... ....+++.|+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-- 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK-- 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS--
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC--
Confidence 89999999999999999999999999999 4688889982 100 2334777777
Q ss_pred cccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 210 QIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 210 ~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 107 ----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 107 ----VLGQPWTFVVDREGKV----VALFAGRAGREALLDALLLA 142 (154)
T ss_dssp ----BCSSCEEEEECTTSEE----EEEEESBCCHHHHHHHHHHT
T ss_pred ----CCcccEEEEECCCCCE----EEEEcCCCCHHHHHHHHHhc
Confidence 7799998777 56643 35678999999999999887
No 180
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.61 E-value=4.5e-08 Score=94.50 Aligned_cols=98 Identities=11% Similarity=0.123 Sum_probs=73.2
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-c------ceeeeeccc--hhhhhHHHHhCCCC------------c
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-A------NTGMVELGD--IRLATHLAERKPIG------------Q 210 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~------~va~Vdc~~--~~~~~~L~~k~~i~------------~ 210 (699)
.++++||.||++||++|+...|.+.++++.+.+. + .|..|+++. .......++++++. +
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 5789999999999999999999999999999765 5 889999986 23333455554431 0
Q ss_pred ---ccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 211 ---IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 211 ---~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
.|.|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRP----AAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCE----EEEECSCCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHH
Confidence 1247899976555 66653 346789999999999998763
No 181
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.59 E-value=2.4e-08 Score=94.76 Aligned_cols=89 Identities=17% Similarity=0.106 Sum_probs=66.9
Q ss_pred cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchh--------------------hhhHHHHhCCCCc
Q 005374 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (699)
Q Consensus 151 ~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~--------------------~~~~L~~k~~i~~ 210 (699)
..+++++|.||++||++|+...|.++++++. .+.|..|++++.. ....++++++
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 122 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLG--- 122 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHT---
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcC---
Confidence 4688999999999999999999999999876 3577777754211 1223677777
Q ss_pred ccccccccE-EEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 211 IFFRRGLPS-LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 211 ~f~V~gyPT-l~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++|+ +++.++|.. ...+.|..+.+.+.+++.+.
T Consensus 123 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 123 ---VYGAPETFLIDGNGII----RYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp ---CCSSSEEEEECTTSBE----EEEEESCCCHHHHHHTTHHH
T ss_pred ---ccccCEEEEECCCCeE----EEEEeCCCCHHHHHHHHHHH
Confidence 779995 555566643 24678999999999988776
No 182
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.59 E-value=3.8e-08 Score=92.28 Aligned_cols=92 Identities=10% Similarity=0.011 Sum_probs=70.7
Q ss_pred CCCcEEEEEeccCCCCCCC-cchHHHHHHHHhhcc-cceeeeecc-------chhhhh------------------H---
Q 005374 152 DSKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-ANTGMVELG-------DIRLAT------------------H--- 201 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~-l~p~~~~~A~~L~g~-~~va~Vdc~-------~~~~~~------------------~--- 201 (699)
.+++++|.||++||++|+. +.|.++++++++.+. +.|..|+++ ...... .
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 5789999999999999999 599999999999765 578888762 111111 1
Q ss_pred ---HHHhCCCCcccccccccEEEEcC-CCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 202 ---LAERKPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 202 ---L~~k~~i~~~f~V~gyPTl~~f~-~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
+++.|+ |.++|+++++. +|.. ...|.|..+.+.|.+++.+.+
T Consensus 109 ~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 154 (160)
T 3lor_A 109 IPSTMKKYR------LEGTPSIILADRKGRI----RQVQFGQVDDFVLGLLLGSLL 154 (160)
T ss_dssp SCHHHHHTT------CCSSSEEEEECTTSBE----EEEEESCCCHHHHHHHHHHHH
T ss_pred hhhHHHhcc------cCccceEEEECCCCcE----EEEecCcCCHHHHHHHHHHHH
Confidence 556665 77999999995 5543 356779999999999998774
No 183
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.56 E-value=2.4e-08 Score=93.06 Aligned_cols=89 Identities=11% Similarity=0.097 Sum_probs=67.3
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchh--------------------hhhHHHHhCCCCcc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~--------------------~~~~L~~k~~i~~~ 211 (699)
.+++++|.||++||++|+...|.+++++++ +.+.+..|+++++. ....+++.++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 114 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWG---- 114 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTT----
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcC----
Confidence 478999999999999999999999999876 44677777764321 1223677777
Q ss_pred cccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 212 f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 115 --v~~~P~~~~id~~G~i----~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 115 --VYGVPETFVVGREGTI----VYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp --CCSSCEEEEECTTSBE----EEEEESCCCHHHHHHTHHHH
T ss_pred --cCccCeEEEEcCCCCE----EEEEeCCCCHHHHHHHHHHH
Confidence 7799976555 66643 24578999999999988776
No 184
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.55 E-value=2e-06 Score=90.38 Aligned_cols=158 Identities=10% Similarity=0.151 Sum_probs=107.5
Q ss_pred ecccchhhhhhhhhcCCCcEEEE-EEcCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEE
Q 005374 261 YYTKESMGKNFLAKTGPHKVKVI-FFSKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (699)
Q Consensus 261 ~it~~~~~~~Fl~~~~~~~v~vl-~f~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvl 336 (699)
.++..+ ++.++.. .+++.+| |+.+- |....|.+..+|..+.+.+.|+.|.........++++|+|.++||+++
T Consensus 21 ~lt~~~-f~~~i~~--~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~ 97 (298)
T 3ed3_A 21 ELTPKS-FDKAIHN--TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMV 97 (298)
T ss_dssp ECCHHH-HHHHHTS--SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEE
T ss_pred EeCHHH-HHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEE
Confidence 355544 6666642 2344444 55442 334567788899989888999999765444578999999999999999
Q ss_pred EcCCC----------------CCceeecCCCChhHHHHHHHHhhccccccCCccccccccccchhhhhhccCcCCCCCCC
Q 005374 337 LKDPG----------------VKPVVYYGSFNNSRLSEVMEQNKLQGLYFCGTCVSELPQLRSVTSMELGCDARGYSRAG 400 (699)
Q Consensus 337 fk~~~----------------~~pv~y~g~~~~~~L~~fi~~~~~~~~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~ 400 (699)
|+++. ..+..|.|.++.+.|.+|+....-+ .+.++++...++..... ..
T Consensus 98 ~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~----------~v~~i~~~~~l~~~l~~-----~~ 162 (298)
T 3ed3_A 98 FRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRS----------YVKKFVRIDTLGSLLRK-----SP 162 (298)
T ss_dssp EECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCC----------CEEECSCGGGHHHHHTS-----CS
T ss_pred EECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhccc----------ccEEcCCHHHHHHHHhc-----CC
Confidence 99864 1356789999999999999987666 56677665444433211 01
Q ss_pred CCccceEEEEEeccCChhHHHHHHHHHHHHHhhccCcccccccccccchhHHHhcCCCeEEEEEEeCc
Q 005374 401 SDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGE 468 (699)
Q Consensus 401 ~~~~~~lCvI~~~~~~~~~~~~~~~lr~~a~~l~~~~~~~~~~~~~~~~~~a~~~k~~~l~F~wvd~~ 468 (699)
..+||++...+. ....++.+|. .|++ .+.|+.++..
T Consensus 163 -----~~~vi~fs~~~~----~~~~f~~~A~----------------------~~~~-~~~F~~v~~~ 198 (298)
T 3ed3_A 163 -----KLSVVLFSKQDK----ISPVYKSIAL----------------------DWLG-KFDFYSISNK 198 (298)
T ss_dssp -----SEEEEEEESSSS----CCHHHHHHHH----------------------HTBT-TEEEEEEEGG
T ss_pred -----ceEEEEEcCCCc----chHHHHHHHH----------------------Hhhc-CcEEEEEcch
Confidence 467777754332 2245666666 6775 4999999875
No 185
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.54 E-value=1e-07 Score=90.06 Aligned_cols=88 Identities=9% Similarity=0.101 Sum_probs=69.5
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeecc------------------chh-hh-------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG------------------DIR-LA------------- 199 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~------------------~~~-~~------------- 199 (699)
.++++||.||++||++|+...|.+.++++.+. .+.|..|+++ +.. ..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 56899999999999999999999999999998 5688888887 221 11
Q ss_pred -----hHHHHhCCCCcccccccccEEEEc-CCCCCCCCccccccCCc-CHHHHHHHHHHH
Q 005374 200 -----THLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL-SVDAVTDWFATA 252 (699)
Q Consensus 200 -----~~L~~k~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~r-s~~~Iv~fi~k~ 252 (699)
..+++.|+ |.++|+++++ ++|.. .+.|.. +.+.|.+++.+.
T Consensus 115 ~~~d~~~~~~~~~------v~~~P~~~lid~~G~i------~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 115 MVMDDGSLVEKFN------VRSIDYIVIMDKSSNV------LYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp EEECCSHHHHHTT------CCSSSEEEEEETTCCE------EEEEESCCHHHHHHHHHHC
T ss_pred EEeChHHHHHHhC------CCCceEEEEEcCCCcE------EEeCCCCCHHHHHHHHHHH
Confidence 13666666 7799999999 55643 227888 899999988765
No 186
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.53 E-value=7.3e-08 Score=90.23 Aligned_cols=92 Identities=15% Similarity=0.024 Sum_probs=70.3
Q ss_pred CCCcEEEEEeccCCCCCCCc-chHHHHHHHHhhcc-cceeeeecc-------chhhhh----------------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGI-ANTGMVELG-------DIRLAT---------------------- 200 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l-~p~~~~~A~~L~g~-~~va~Vdc~-------~~~~~~---------------------- 200 (699)
.++++||.||++||++|+.. .|.+.++++++.+. +.|..|+++ ......
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 47899999999999999996 99999999999754 477788763 111111
Q ss_pred -HHHHhCCCCcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 201 -HLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 201 -~L~~k~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
.+++.|+ |.++|+++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 107 ~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 107 PRTMAAYQ------MRGTPSLLLIDKAGDL----RAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp CHHHHHTT------CCSSSEEEEECTTSEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcC------CCCCCEEEEECCCCCE----EEEEeCCCCHHHHHHHHHHHh
Confidence 2566666 7799999888 45543 346779999999999998774
No 187
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.52 E-value=8e-08 Score=89.70 Aligned_cols=88 Identities=14% Similarity=0.091 Sum_probs=67.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhh----------------------hhHHHHhCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL----------------------ATHLAERKPI 208 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~----------------------~~~L~~k~~i 208 (699)
.+++++|.||++||++|+...|.+.++++.+.+. +.|..|++++... ...+++.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~- 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC- 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC-
Confidence 4689999999999999999999999999999875 5888999885211 345888888
Q ss_pred CcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 209 ~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.++||++++ ++|... ..+ .+.+.|.+++.+.
T Consensus 107 -----v~~~P~~~lid~~G~i~----~~~---~~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 -----IVGFPHIILVDPEGKIV----AKE---LRGDDLYNTVEKF 139 (152)
T ss_dssp -----CCSSCEEEEECTTSEEE----EEC---CCTTHHHHHHHHH
T ss_pred -----CCcCCeEEEECCCCeEE----Eee---CCHHHHHHHHHHH
Confidence 6699999999 566431 222 2446777777665
No 188
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.52 E-value=3.2e-08 Score=95.55 Aligned_cols=70 Identities=10% Similarity=0.020 Sum_probs=56.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCK 228 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~ 228 (699)
.+++++|.|||+||++|+...|.+++++..+. .+.|..||.++++. ++.+|.. ..|+++||+++|.+|..
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~---~~~~~~~---~~v~~iPt~i~~~~~G~ 122 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAED---DLRQRLA---LERIAIPLVLVLDEEFN 122 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHH---HTTTTTT---CSSCCSSEEEEECTTCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHH---HHHHHHH---cCCCCcCeEEEECCCCC
Confidence 46789999999999999999999999998764 46888999885544 6776641 12679999999988643
No 189
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.50 E-value=7.2e-08 Score=89.07 Aligned_cols=70 Identities=10% Similarity=0.040 Sum_probs=57.2
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc--ccceeeeeccchh---------------------hhhHHHHhCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIR---------------------LATHLAERKPI 208 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g--~~~va~Vdc~~~~---------------------~~~~L~~k~~i 208 (699)
.++++||.||++||++|+...|.++++++++.+ .+.|..|++++.. ....++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD- 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC-
Confidence 468999999999999999999999999999974 4578888887532 1245788887
Q ss_pred CcccccccccEEEEcC--CCC
Q 005374 209 GQIFFRRGLPSLVAFP--PGC 227 (699)
Q Consensus 209 ~~~f~V~gyPTl~~f~--~g~ 227 (699)
|.++||++++. +|.
T Consensus 106 -----v~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 106 -----VKSIPTLVGVEADSGN 121 (144)
T ss_dssp -----CCSSSEEEEEETTTCC
T ss_pred -----CCCCCEEEEEECCCCc
Confidence 67999999995 564
No 190
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.50 E-value=1e-07 Score=87.61 Aligned_cols=94 Identities=15% Similarity=0.199 Sum_probs=66.7
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHH---HHHHhhcc-cceeeeeccchhh-hhHHHHhCCC--------------Cccc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRL-ATHLAERKPI--------------GQIF 212 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~---~A~~L~g~-~~va~Vdc~~~~~-~~~L~~k~~i--------------~~~f 212 (699)
.++++||.||++||++|+...|.+.+ +.+.+++. +.|..|+++++.. .....+++++ .+.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 47899999999999999999999998 88888654 4788888874332 1223332221 1245
Q ss_pred ccccccEEEEcC-CCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 213 FRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~-~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.|.++|+++++. +|. ..+ +..+.+.|.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G~------i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKR------VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCB------EEE-CSCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCC------EEe-cCCCHHHHHHHHHHH
Confidence 588999999995 553 222 667889999988754
No 191
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.50 E-value=2.4e-08 Score=85.93 Aligned_cols=73 Identities=23% Similarity=0.215 Sum_probs=59.4
Q ss_pred EEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccccc
Q 005374 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (699)
Q Consensus 157 lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y 236 (699)
++.|++|||+.|+.+.|.+++++..+ +.+||.++++. ++++++ ++ +|||++ .+|.. .
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~---l~~~~g------~~-vPtl~~-~~G~~-----v-- 59 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAA---LESAYG------LR-VPVLRD-PMGRE-----L-- 59 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHH---HHHHHT------TT-CSEEEC-TTCCE-----E--
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHH---HHHHhC------CC-cCeEEE-ECCEE-----E--
Confidence 78999999999999999988776432 68899997665 888887 77 999998 77742 2
Q ss_pred cCCcCHHHHHHHHHHH
Q 005374 237 EGELSVDAVTDWFATA 252 (699)
Q Consensus 237 ~G~rs~~~Iv~fi~k~ 252 (699)
.|..+.+.|.+|+.+.
T Consensus 60 ~g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 60 DWPFDAPRLRAWLDAA 75 (87)
T ss_dssp ESCCCHHHHHHHHHTC
T ss_pred eCCCCHHHHHHHHHHH
Confidence 3888999999999765
No 192
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.47 E-value=8.6e-08 Score=88.85 Aligned_cols=70 Identities=9% Similarity=0.040 Sum_probs=57.3
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc--ccceeeeeccchh---------------------hhhHHHHhCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIR---------------------LATHLAERKPI 208 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g--~~~va~Vdc~~~~---------------------~~~~L~~k~~i 208 (699)
.+++++|.||++||++|+...|.++++++++.+ .+.|..|++++.. ....++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN- 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT-
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC-
Confidence 568999999999999999999999999999973 4578888887532 1245888887
Q ss_pred CcccccccccEEEEcC--CCC
Q 005374 209 GQIFFRRGLPSLVAFP--PGC 227 (699)
Q Consensus 209 ~~~f~V~gyPTl~~f~--~g~ 227 (699)
|.++||++++. +|.
T Consensus 106 -----v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 106 -----VESIPTLIGVDADSGD 121 (146)
T ss_dssp -----CCSSSEEEEEETTTCC
T ss_pred -----CCCCCEEEEEECCCCe
Confidence 67999999996 564
No 193
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.44 E-value=1.3e-07 Score=87.12 Aligned_cols=93 Identities=11% Similarity=0.135 Sum_probs=63.3
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHH---HHHHhhcc-cceeeeeccchhhh-hHHHHhCC--------------CCccc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRLA-THLAERKP--------------IGQIF 212 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~---~A~~L~g~-~~va~Vdc~~~~~~-~~L~~k~~--------------i~~~f 212 (699)
.+++++|.|||+||++|+...|.+.+ +.+.+++. +.|..|+.+++... ....++++ +.+.|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 35899999999999999999999999 99998654 47777888754221 11112211 12345
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHH
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~ 250 (699)
.|.++||++++...+. ..+.+ .+.+.|.+|+.
T Consensus 110 ~v~~~P~~~lid~~G~-----i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKT-----VLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp CCTTCSEEEEECTTCB-----EEEEE-ECHHHHHHHHH
T ss_pred CCCcCCeEEEECCCCc-----EEecC-CCHHHHHHHHh
Confidence 5889999999954433 22322 35778887764
No 194
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.44 E-value=9.9e-08 Score=87.86 Aligned_cols=70 Identities=10% Similarity=0.128 Sum_probs=56.7
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhh--cccceeeeeccchh---------------------hhhHHHHhCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIR---------------------LATHLAERKPI 208 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~--g~~~va~Vdc~~~~---------------------~~~~L~~k~~i 208 (699)
.++++||.||++||++|+...|.++++++++. ..+.|..|+++.+. ....++++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG- 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT-
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC-
Confidence 57899999999999999999999999999997 34578888887532 1234777777
Q ss_pred CcccccccccEEEEcC--CCC
Q 005374 209 GQIFFRRGLPSLVAFP--PGC 227 (699)
Q Consensus 209 ~~~f~V~gyPTl~~f~--~g~ 227 (699)
|.++||++++. +|.
T Consensus 106 -----v~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 106 -----VESIPTLITINADTGA 121 (144)
T ss_dssp -----CCSSSEEEEEETTTCC
T ss_pred -----CCCCCEEEEEECCCCe
Confidence 77999999997 553
No 195
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.43 E-value=1.4e-07 Score=87.66 Aligned_cols=91 Identities=10% Similarity=0.165 Sum_probs=68.6
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhh--------------------hHHHHhCCCCc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA--------------------THLAERKPIGQ 210 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~--------------------~~L~~k~~i~~ 210 (699)
.++++||.||++||++|+...|.+.++++.+.+. +.|..|+++.+... ..+++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYG--- 103 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHT---
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhC---
Confidence 5789999999999999999999999999999873 48888888854111 22666666
Q ss_pred ccccccccEEEEc-CCCCCCCCccccccCCc--CHHHHHHHHHHH
Q 005374 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (699)
Q Consensus 211 ~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~r--s~~~Iv~fi~k~ 252 (699)
|.++|+++++ ++|.. ...+.|.. +.+.+.+++.+.
T Consensus 104 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 104 ---TTGVPETFVIDRHGVI----LKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp ---CCSBCEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHTC
T ss_pred ---CCCCCeEEEECCCCcE----EEEEcCCCccccHHHHHHHHHH
Confidence 7799976666 56643 24566764 667888888764
No 196
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.39 E-value=2.1e-07 Score=87.48 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=67.5
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc-ccceeeeeccch----------------hhhhHHHHhCCCCccccc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDI----------------RLATHLAERKPIGQIFFR 214 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g-~~~va~Vdc~~~----------------~~~~~L~~k~~i~~~f~V 214 (699)
.+++++|.||++||++|+...|.+.++++.+.. .+.|..|+++.. .....+++.|+ |
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------v 113 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYG------A 113 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTT------C
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhC------C
Confidence 568999999999999999999999999999974 348888888751 01234888888 6
Q ss_pred ccccEEEEc-CCCCCCCCccccccCC--cCHHHHHHHHHHH
Q 005374 215 RGLPSLVAF-PPGCKSSDCMTRFEGE--LSVDAVTDWFATA 252 (699)
Q Consensus 215 ~gyPTl~~f-~~g~~~~~~~~~Y~G~--rs~~~Iv~fi~k~ 252 (699)
.++|+++++ ++|.. ...|.|. .+..++++.+.+.
T Consensus 114 ~~~P~~~lid~~G~i----~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 114 NRLPDTFIVDRKGII----RQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp CSSSEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHTT
T ss_pred CCcceEEEEcCCCCE----EEEEeCCCccchHHHHHHHHhh
Confidence 699997777 55543 3456665 4566666666543
No 197
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.37 E-value=2.1e-07 Score=100.33 Aligned_cols=62 Identities=26% Similarity=0.521 Sum_probs=52.9
Q ss_pred cCcccccCcCCCCCHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCChhhhcccCc
Q 005374 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNYDV 98 (699)
Q Consensus 37 ~d~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~------~~~~f~~I~~Ay~vL~d~~~R~~YD~ 98 (699)
.++|.+||+.+.++.++|+++|+++++++|||+.+. +.++|..|.+||++|+||++|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 489999999999999999999999999999998764 35679999999999999999999996
No 198
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.34 E-value=2.9e-07 Score=86.38 Aligned_cols=88 Identities=13% Similarity=-0.013 Sum_probs=67.1
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhh--------------------HHHHhCCCCc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLAT--------------------HLAERKPIGQ 210 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~--------------------~L~~k~~i~~ 210 (699)
.+++++|.||++||++|+...|.+.++++++.+. +.|..|+++...... .+++.|+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--- 110 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYN--- 110 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHT---
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcC---
Confidence 3679999999999999999999999999999876 588899988543210 1556666
Q ss_pred ccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHH
Q 005374 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWF 249 (699)
Q Consensus 211 ~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi 249 (699)
|.++|+++++ ++|.. ...+.|..+.+..+.-+
T Consensus 111 ---v~~~P~~~lid~~G~i----~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 111 ---VTNLPSVFLVNRNNEL----SARGENIKDLDEAIKKL 143 (152)
T ss_dssp ---CCSCSEEEEEETTTEE----EEETTTCSCHHHHHHHH
T ss_pred ---cccCceEEEECCCCeE----EEecCCHHHHHHHHHHH
Confidence 7799999999 56643 34567877766655443
No 199
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.33 E-value=2.8e-07 Score=87.97 Aligned_cols=68 Identities=9% Similarity=0.089 Sum_probs=56.0
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc--ccceeeeeccchhh---------------------hhHHHHhCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIRL---------------------ATHLAERKPI 208 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g--~~~va~Vdc~~~~~---------------------~~~L~~k~~i 208 (699)
.++++||.||++||++|+...|.++++++++.+ .+.|..|++++... ...+++.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS- 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC-
Confidence 478999999999999999999999999999975 34788888775421 145788887
Q ss_pred CcccccccccEEEEcCC
Q 005374 209 GQIFFRRGLPSLVAFPP 225 (699)
Q Consensus 209 ~~~f~V~gyPTl~~f~~ 225 (699)
|.++||++++..
T Consensus 126 -----v~~~Pt~~lid~ 137 (165)
T 3s9f_A 126 -----VESIPTLIGLNA 137 (165)
T ss_dssp -----CCSSSEEEEEET
T ss_pred -----CCCCCEEEEEeC
Confidence 679999999974
No 200
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.32 E-value=4.5e-06 Score=78.69 Aligned_cols=133 Identities=17% Similarity=0.291 Sum_probs=83.9
Q ss_pred HHHhhccccccCCccccccccccchhhhhhccCcCCCCCCCCCccceEEEEEec-cCChhHHHHHHHHHHHHHhhccCcc
Q 005374 360 MEQNKLQGLYFCGTCVSELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAG-RLSPELNKMRETIRRVQETLLSDDE 438 (699)
Q Consensus 360 i~~~~~~~~~~~~~~~~~vp~Lts~s~~~~~c~~~~~~~~~~~~~~~lCvI~~~-~~~~~~~~~~~~lr~~a~~l~~~~~ 438 (699)
++.|++| .++++|..+..... . ++. ...++++. ..+.+.+.++..++++|+
T Consensus 8 ~~~~~~P----------LV~e~t~en~~~~~-~------~~~----~~~~l~f~~~~~~~~~~~~~~~~~vAk------- 59 (147)
T 3bj5_A 8 MKHNQLP----------LVIEFTEQTAPKIF-G------GEI----KTHILLFLPKSVSDYDGKLSNFKTAAE------- 59 (147)
T ss_dssp -----------------CEEECCTTTHHHHH-S------SSC----CEEEEEECCTTSSSHHHHHHHHHHHHH-------
T ss_pred hhhccCC----------eeEEeccccHHHHh-c------CCC----ceEEEEEecCCcHhHHHHHHHHHHHHH-------
Confidence 4567777 78888777764432 1 111 33334343 234457888999999998
Q ss_pred cccccccccchhHHHhcCCCeEEEEEEeC--cchHHHHHHh-ccccccccccCCcCCCCCCCeEEEEEeecCCcccccee
Q 005374 439 SNAADTDQSLAPAAVAFRNKRLTFAWLDG--EAQDRYCSFY-LFSETSFETCGARRDMSDVPRLFIVRYKRNTTEDEAKI 515 (699)
Q Consensus 439 ~~~~~~~~~~~~~a~~~k~~~l~F~wvd~--~~q~~f~~~f-l~~~~~~~~c~~~~~~~~~p~lvI~~~rr~~~~~~~~~ 515 (699)
+|+++ +.|+|+|. +.....+++| +..+ ++|.|+|+ +.+....||
T Consensus 60 ---------------~fkgk-i~Fv~vd~~~~~~~~~l~~fGl~~~-------------~~P~v~i~----~~~~~~~Ky 106 (147)
T 3bj5_A 60 ---------------SFKGK-ILFAFIDSDHTDNQRILEFFGLKKE-------------ECPAVRLI----TLEEEMTKY 106 (147)
T ss_dssp ---------------TTTTT-CEEEEECTTCGGGHHHHHHTTCCGG-------------GCSEEEEE----ECSSSCEEE
T ss_pred ---------------HcCCc-eEEEEEecchHhHHHHHHHcCCCcc-------------cCCEEEEE----ecccccccC
Confidence 88875 99999999 6666778877 3322 34888887 531111467
Q ss_pred eccccccccccccccCCccccchhccCCCCChHHHHHHHHHHhcCCCCCCCCcccCCCCCC-CC
Q 005374 516 ERKPRNIWDAMQEQEVDPASQLVVRYNGSDEIPQIAKWVSEIIQDGDSKDLPFYRAKTPEL-VP 578 (699)
Q Consensus 516 ~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~g~~~~l~~~~~~~p~l-~~ 578 (699)
. + +.++. +.+.|..|+++++. ++....++++.+|+- ++
T Consensus 107 ~------~---~~~~~--------------t~~~i~~Fv~d~l~--GkL~p~~KSEpiPe~wn~ 145 (147)
T 3bj5_A 107 K------P---ESEEL--------------TAERITEFCHRFLE--GKIKPHLMSQELPEDWDK 145 (147)
T ss_dssp C------C---SCCCC--------------CHHHHHHHHHHHHT--TCSCEEECCSCCCGGGC-
T ss_pred C------C---CcccC--------------CHHHHHHHHHHHHc--CCccccccCCCCCCCcCC
Confidence 6 3 32222 56899999999998 666777789999986 53
No 201
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.32 E-value=5e-07 Score=87.46 Aligned_cols=97 Identities=7% Similarity=-0.005 Sum_probs=68.7
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccch--------h------------------hhhHHHHh
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI--------R------------------LATHLAER 205 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~--------~------------------~~~~L~~k 205 (699)
.++++||.||++||++|+...|.++++++++.+.+.|..|+++.. . ....+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 468999999999999999999999999999976577888887320 0 11236677
Q ss_pred CCCCcccccccccEEEEc-CCCCCCCCccc----cccCCcCHHHHHHHHHHHhc
Q 005374 206 KPIGQIFFRRGLPSLVAF-PPGCKSSDCMT----RFEGELSVDAVTDWFATAIL 254 (699)
Q Consensus 206 ~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~----~Y~G~rs~~~Iv~fi~k~v~ 254 (699)
|+ |.++|+++++ ++|........ .+.|..+.+.|.+.+.+.+.
T Consensus 112 ~~------v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 112 YR------ALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp TT------CCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred cC------CCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 76 7799999998 45532100000 02344578889999887743
No 202
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.32 E-value=4.3e-07 Score=88.30 Aligned_cols=93 Identities=9% Similarity=-0.022 Sum_probs=70.2
Q ss_pred CCC-cEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccch--------h------------------hhhHHH
Q 005374 152 DSK-PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------R------------------LATHLA 203 (699)
Q Consensus 152 ~~~-~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~--------~------------------~~~~L~ 203 (699)
.++ ++||.||++||++|+...|.++++++++... +.|..|+++.. . ....++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 345 5999999999999999999999999999765 58888988421 0 112366
Q ss_pred HhCCCCcccccccccEEEEc-CCCCCCCCcccc---------ccCCcCHHHHHHHHHHHhc
Q 005374 204 ERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTR---------FEGELSVDAVTDWFATAIL 254 (699)
Q Consensus 204 ~k~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~---------Y~G~rs~~~Iv~fi~k~v~ 254 (699)
+.|+ |.++|+++++ ++|... .. +.|..+.+.|.+++.+.+.
T Consensus 124 ~~~~------v~~~P~~~lid~~G~i~----~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 124 KAYD------AACTPDFYIFDRDLKCV----YRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp HHHT------CCEESEEEEEETTCBEE----EEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred HHhC------CCCCCeEEEEcCCCeEE----EccccCcccccccCccCHHHHHHHHHHHHc
Confidence 6776 7799999999 556432 22 4577889999999987743
No 203
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.31 E-value=4.7e-07 Score=97.63 Aligned_cols=92 Identities=11% Similarity=-0.048 Sum_probs=72.5
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccch------h------------------hhhHHHHhC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI------R------------------LATHLAERK 206 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~------~------------------~~~~L~~k~ 206 (699)
.++++||.||++||++|+...|.+++++++++.. +.|..|+|++. . ....+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 4789999999999999999999999999999764 58888887521 0 012367777
Q ss_pred CCCcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 207 ~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
+ |.++|+++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 161 g------V~~~Pt~~lID~~G~I----v~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 161 R------NRYWPAEYLIDATGTV----RHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp T------CCEESEEEEECTTSBE----EEEEESBCCHHHHHHHHHHHH
T ss_pred C------CCccCEEEEEeCCCeE----EEEEcCCCCHHHHHHHHHHHH
Confidence 6 7799998888 56643 356789999999999998764
No 204
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.31 E-value=4.2e-07 Score=73.66 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=46.4
Q ss_pred CcccccCcCCC---CCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCC
Q 005374 38 SHYDALGIKPY---SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTD 89 (699)
Q Consensus 38 d~Y~vLgv~~~---as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~I~~Ay~vL~d 89 (699)
.-|.||||++. ++.++|+++||+|....|||+. ++.-...+|++|++.|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG-GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG-GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT-CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 45889999999 9999999999999999999995 778889999999999864
No 205
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.30 E-value=6.1e-07 Score=86.58 Aligned_cols=98 Identities=15% Similarity=0.269 Sum_probs=72.7
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc-ccceeeeeccch--hhhhHHHHhCCCC-------------ccccc-
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDI--RLATHLAERKPIG-------------QIFFR- 214 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g-~~~va~Vdc~~~--~~~~~L~~k~~i~-------------~~f~V- 214 (699)
.+++++|.||++||++|+...|.++++.+++.. .+.|..|+++.. .....+++++++. +.|.+
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 468999999999999999999999999999974 348888888854 3334577777742 11222
Q ss_pred ---ccccEEEEc-CCCCCCCCccccccCCcC--HHHHHHHHHHHh
Q 005374 215 ---RGLPSLVAF-PPGCKSSDCMTRFEGELS--VDAVTDWFATAI 253 (699)
Q Consensus 215 ---~gyPTl~~f-~~g~~~~~~~~~Y~G~rs--~~~Iv~fi~k~v 253 (699)
.++|+++++ ++|.. ...|.|..+ .+.|.+++.+.+
T Consensus 139 ~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCE----IATIAGPAEWASEDALKLIRAAT 179 (186)
T ss_dssp TCCSSSSEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCE----EEEEecCCccCHHHHHHHHHHHh
Confidence 389999988 55643 245677654 788999988763
No 206
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.29 E-value=3.3e-06 Score=77.42 Aligned_cols=101 Identities=19% Similarity=0.225 Sum_probs=77.4
Q ss_pred cCCccee--cccchhhhhhhhhcCCCcEEEEE-EcCCCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCC
Q 005374 255 KLPRIFY--YTKESMGKNFLAKTGPHKVKVIF-FSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESA 331 (699)
Q Consensus 255 ~lP~~~~--it~~~~~~~Fl~~~~~~~v~vl~-f~~~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~ 331 (699)
.+|+... |++.+.++.|+.. +.+.||. |.+.+......+..+|..+ +.+.||.+. +.+++++|+++ .
T Consensus 17 ~gP~~~~~~i~s~~e~e~fi~~---~~v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t~-----~~~v~~~~~v~-~ 86 (124)
T 2l4c_A 17 PGAAQEPTWLTDVPAAMEFIAA---TEVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIST-----DSEVLTHYNIT-G 86 (124)
T ss_dssp SCCSCCCEECCSHHHHHHHHHT---SSEEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEEC-----CHHHHHHTTCC-S
T ss_pred cCCCCcceEcCCHHHHHHHHhc---CCCEEEEEECCCCChhHHHHHHHHHhC-CCceEEEEC-----hHHHHHHcCCC-C
Confidence 3666655 7666668899864 3365664 4443444567777788888 899999884 36799999998 7
Q ss_pred CEEEEEcCCCCCceeecC----CCChhHHHHHHHHhhc
Q 005374 332 PAIVFLKDPGVKPVVYYG----SFNNSRLSEVMEQNKL 365 (699)
Q Consensus 332 PtIvlfk~~~~~pv~y~g----~~~~~~L~~fi~~~~~ 365 (699)
|+|++|+.++++++.|.| .++.+.|.+||..|++
T Consensus 87 ~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 87 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp SCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred CeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 999999998888888986 7899999999998863
No 207
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.58 E-value=1.2e-07 Score=86.97 Aligned_cols=69 Identities=16% Similarity=0.109 Sum_probs=53.2
Q ss_pred CC-cEEEEEeccCCCCCCCcchHHHHHHHHhh---cccceeeeeccchhh----------------------hhHHHHhC
Q 005374 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLE---GIANTGMVELGDIRL----------------------ATHLAERK 206 (699)
Q Consensus 153 ~~-~~lV~FYapwC~hCk~l~p~~~~~A~~L~---g~~~va~Vdc~~~~~----------------------~~~L~~k~ 206 (699)
++ +++|.||++||++|+...|.++++++.++ ..+.+..|++++... ...+++.|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 99999999999999999999999999983 234778888774321 02356666
Q ss_pred CCCcccccccccEEEEcC-CCC
Q 005374 207 PIGQIFFRRGLPSLVAFP-PGC 227 (699)
Q Consensus 207 ~i~~~f~V~gyPTl~~f~-~g~ 227 (699)
+ |.++||++++. +|.
T Consensus 105 ~------v~~~P~~~lid~~G~ 120 (143)
T 2lus_A 105 G------ITGIPALVIVKKDGT 120 (143)
Confidence 5 77999999997 554
No 208
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.25 E-value=5.7e-08 Score=86.67 Aligned_cols=87 Identities=13% Similarity=0.147 Sum_probs=54.5
Q ss_pred ccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchh--hhhHHHHhCCCCcccccccccEEEEcCC
Q 005374 148 SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--LATHLAERKPIGQIFFRRGLPSLVAFPP 225 (699)
Q Consensus 148 ~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~--~~~~L~~k~~i~~~f~V~gyPTl~~f~~ 225 (699)
..++. +++++ ||++||++|+.+.|.+++++.. ..+..||.+.+. ....++++++ |.++||+ |.+
T Consensus 15 ~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~------v~~~Pt~--~~~ 80 (116)
T 2e7p_A 15 ELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTG------RGTVPNV--FIG 80 (116)
T ss_dssp HHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE--EET
T ss_pred HHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhC------CCCcCEE--EEC
Confidence 33443 45555 9999999999999999887543 244455544320 1134888888 6699999 456
Q ss_pred CCCCCCccccccCCc---CHHHHHHHHHHH
Q 005374 226 GCKSSDCMTRFEGEL---SVDAVTDWFATA 252 (699)
Q Consensus 226 g~~~~~~~~~Y~G~r---s~~~Iv~fi~k~ 252 (699)
|.. ...|.|.. +.+.|.+|+.+.
T Consensus 81 g~~----v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 81 GKQ----IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp TEE----EECHHHHHHHHHTTCHHHHHHHT
T ss_pred CEE----ECChHHHHHHHhCChHHHHHHHc
Confidence 642 23334433 555666776654
No 209
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=1.9e-06 Score=80.09 Aligned_cols=88 Identities=11% Similarity=0.065 Sum_probs=66.4
Q ss_pred CCCcEEEEEeccCCCC--CCCcchHHHHHHHHh-hcc-cceeeeeccchhh----------------------hhHHHHh
Q 005374 152 DSKPWLIQVYSDGSYL--CGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAER 205 (699)
Q Consensus 152 ~~~~~lV~FYapwC~h--Ck~l~p~~~~~A~~L-~g~-~~va~Vdc~~~~~----------------------~~~L~~k 205 (699)
.+++++|.||++||++ |+...|.+.++.+++ ++. +.|..|+++..+. ...+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4689999999999999 999999999999999 655 4888888885431 1246777
Q ss_pred CCCCcccccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 206 KPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 206 ~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|+ |.++|+++++ ++|.. .+.. .+.+.+.+.+.+.
T Consensus 112 ~~------v~~~P~~~lid~~G~i------~~~~-~~~~~l~~~l~~l 146 (150)
T 3fw2_A 112 YS------IYKIPANILLSSDGKI------LAKN-LRGEELKKKIENI 146 (150)
T ss_dssp TT------CCSSSEEEEECTTSBE------EEES-CCHHHHHHHHHHH
T ss_pred cC------CCccCeEEEECCCCEE------EEcc-CCHHHHHHHHHHH
Confidence 77 7799999999 55642 2222 2677777777655
No 210
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.23 E-value=6.4e-07 Score=86.32 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=65.9
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchh--------------------hhhHHHHhCCCCcc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~--------------------~~~~L~~k~~i~~~ 211 (699)
.+++++|.||++||++|+...|.+++++++ + +.|..|++++.. ....+++.|+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~-v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 129 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--G-VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLG---- 129 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T-CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--C-CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcC----
Confidence 478999999999999999999999999876 3 567777753211 1123555665
Q ss_pred cccccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 212 f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
|.++|+++++ ++|.. ...|.|..+.+.+.+++.+.+
T Consensus 130 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 130 --VYGAPETYLIDKQGII----RHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp --CCSSCEEEEECTTCBE----EEEEESCCCHHHHHHHTHHHH
T ss_pred --CCCCCeEEEECCCCeE----EEEEcCCCCHHHHHHHHHHHH
Confidence 7799977776 55643 346779999999999887763
No 211
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.22 E-value=1.5e-06 Score=82.57 Aligned_cols=99 Identities=10% Similarity=0.112 Sum_probs=71.6
Q ss_pred CCCcccc----cCCCcEEEEEeccCCCCCCCcchHH---HHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 144 EDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 144 ~nF~~~v----~~~~~~lV~FYapwC~hCk~l~p~~---~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
.+|+..+ ..++++||.||++||..|+.+...- .++++.++....+.+||.++. ....++++|+ |.+
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~-~~~~l~~~y~------v~~ 101 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSE-EGQRYIQFYK------LGD 101 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSH-HHHHHHHHHT------CCS
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCH-hHHHHHHHcC------CCC
Confidence 4566665 2589999999999999999996543 566777755556777787642 3345888888 669
Q ss_pred ccEEEEcCCC-CCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 217 LPSLVAFPPG-CKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 217 yPTl~~f~~g-~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
+|+++++.+. ... ...+.| .+++.+++++.+.+
T Consensus 102 ~P~~~fld~~~G~~---l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 102 FPYVSILDPRTGQK---LVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp SSEEEEECTTTCCC---CEEESS-CCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcE---eeecCC-CCHHHHHHHHHHHH
Confidence 9999999653 221 233556 89999999987763
No 212
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.21 E-value=1.8e-07 Score=78.30 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=44.8
Q ss_pred EEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCC
Q 005374 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (699)
Q Consensus 157 lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g 226 (699)
++.||+|||++|+.+.|.++++++++.....+..||.+. ....+++++| |+++|||++ +|
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~g------v~~vPt~~i--~g 63 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDK--ARIAEAEKAG------VKSVPALVI--DG 63 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCS--STHHHHHHHT------CCEEEEEEE--TT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCh--hhHHHHHHcC------CCcCCEEEE--CC
Confidence 678999999999999999999887664434555555431 1223778888 679999987 55
No 213
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.18 E-value=4.7e-07 Score=85.74 Aligned_cols=97 Identities=13% Similarity=0.021 Sum_probs=72.7
Q ss_pred CCCcEEEEEeccCCCC-CCCcchHHHHHHHHhhc----ccceeeeeccchh----hh---------------------hH
Q 005374 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDIR----LA---------------------TH 201 (699)
Q Consensus 152 ~~~~~lV~FYapwC~h-Ck~l~p~~~~~A~~L~g----~~~va~Vdc~~~~----~~---------------------~~ 201 (699)
.++++||.||++||++ |+...|.+.++.+++.. .+.|..|+++.++ .. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4689999999999998 99999999999998874 3578888887321 00 34
Q ss_pred HHHhCCC---------CcccccccccEEEEcCCCCCCCCccccccCCc--CHHHHHHHHHHH
Q 005374 202 LAERKPI---------GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (699)
Q Consensus 202 L~~k~~i---------~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~r--s~~~Iv~fi~k~ 252 (699)
+++.+++ ...|.|.++|+++++.+|.. ...|.|.. +.+.|.+.+.+.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i----~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRL----VLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEE----EEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEE----EEEECCCCCCCHHHHHHHHHHh
Confidence 6666664 22355789999999984432 34567877 889999888764
No 214
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.18 E-value=1.9e-06 Score=82.27 Aligned_cols=96 Identities=8% Similarity=-0.075 Sum_probs=64.7
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeecc--------chhhhhHHH-HhCCCC------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG--------DIRLATHLA-ERKPIG------------ 209 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~--------~~~~~~~L~-~k~~i~------------ 209 (699)
.++++||.||++||+.|+ ..|.+.++++++.+. +.|..|+++ ........+ +++++.
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 468999999999999999 999999999999875 588888874 111222233 321110
Q ss_pred -----------ccccccccc------EEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 210 -----------QIFFRRGLP------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 210 -----------~~f~V~gyP------Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+.|.|.++| +++++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKV----YERYSSLTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 124578999 55554 67753 35577888888898888776
No 215
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.15 E-value=8e-07 Score=100.60 Aligned_cols=95 Identities=15% Similarity=0.138 Sum_probs=74.6
Q ss_pred EEecCCCCccccc-CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccc
Q 005374 139 NVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (699)
Q Consensus 139 ~~Lt~~nF~~~v~-~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gy 217 (699)
..++.+.++.... .....++.||++||++|+.+.|.++++|..+. .+.+.+||.++++. ++++++ |+++
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~---~~~~~~------i~sv 171 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQN---EITERN------VMGV 171 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHH---HHHHTT------CCSS
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHH---HHHHhC------CCcc
Confidence 3456665654433 45667889999999999999999999998875 56899999996655 999998 6799
Q ss_pred cEEEEcCCCCCCCCccccccCCcCHHHHHHHHHH
Q 005374 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (699)
Q Consensus 218 PTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k 251 (699)
||+++ +|.. ...|..+.+.|.+|+.+
T Consensus 172 Pt~~i--~g~~------~~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 172 PAVFV--NGKE------FGQGRMTLTEIVAKVDT 197 (521)
T ss_dssp SEEEE--TTEE------EEESCCCHHHHHHHHCC
T ss_pred CEEEE--CCEE------EecCCCCHHHHHHHHhh
Confidence 99977 6642 23588999999999754
No 216
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.13 E-value=4.3e-06 Score=81.37 Aligned_cols=98 Identities=9% Similarity=-0.048 Sum_probs=70.9
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccc--------hhhhhHHH-HhCCCC------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLA-ERKPIG------------ 209 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~--------~~~~~~L~-~k~~i~------------ 209 (699)
.++++||.||++||+.|....|.++++.+++.+. +.|..|++++ .......+ +++++.
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 5689999999999999999999999999999875 5888898862 22223344 332211
Q ss_pred -----------ccccccccc------E-EEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 210 -----------QIFFRRGLP------S-LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 210 -----------~~f~V~gyP------T-l~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
+.|.|.++| + +++-++|.. ...|.|..+.+.|.+.+.+.+
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 184 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEKKLIPLL 184 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE----EEEECCCCCHHHHHHHHHHHH
Confidence 013578899 5 455567754 345788889999999988763
No 217
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.12 E-value=4.6e-06 Score=78.20 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=68.6
Q ss_pred CCCcEEEEEeccCCCC-CCCcchHHHHHHHHhhc-----ccceeeeeccchh-------------------------hhh
Q 005374 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG-----IANTGMVELGDIR-------------------------LAT 200 (699)
Q Consensus 152 ~~~~~lV~FYapwC~h-Ck~l~p~~~~~A~~L~g-----~~~va~Vdc~~~~-------------------------~~~ 200 (699)
.+++++|.||++||+. |....|.++++.++++. .+.|..|+++... ...
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4689999999999998 99999999999999974 4477788876321 112
Q ss_pred HHHHhCCCCccccccccc---------------EEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 201 ~L~~k~~i~~~f~V~gyP---------------Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
.+++.|+ |.+.| +++++ ++|.. ...|.|..+.+.|.+.+.+.+
T Consensus 102 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYR------VYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF----LDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTT------CCEEEEEECTTSCEEEEECCEEEEECTTSCE----EEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcC------eEEEecCCCCCCCeeEeccceEEEECCCCeE----EEEeCCCCCHHHHHHHHHHHH
Confidence 3666666 66888 54444 66653 345788899999999988763
No 218
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.38 E-value=3.8e-07 Score=85.58 Aligned_cols=95 Identities=8% Similarity=-0.049 Sum_probs=61.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHH-HHHHhh--cccceeeeeccchhh-hhHHHHhCCC------------Ccccc--
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKT-IAALLE--GIANTGMVELGDIRL-ATHLAERKPI------------GQIFF-- 213 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~-~A~~L~--g~~~va~Vdc~~~~~-~~~L~~k~~i------------~~~f~-- 213 (699)
.+++++|.||++||++|+...|.+.+ +...+. ..+.|..|+++++.. ...+++++++ .+.|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46799999999999999999999998 888776 335788888875432 2223322221 11222
Q ss_pred cccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHH
Q 005374 214 RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (699)
Q Consensus 214 V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k 251 (699)
+.++|+++++ ++|... ..+.| .+.+++.+++.+
T Consensus 112 ~~~~P~~~lid~~G~i~----~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIV----KLTRL-YNEEEFASLVQQ 145 (159)
Confidence 4679999888 566432 33444 445555555543
No 219
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.09 E-value=4e-06 Score=79.06 Aligned_cols=97 Identities=8% Similarity=-0.075 Sum_probs=69.8
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccc--------hhhhhHHHH-hCCCCc-----------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAE-RKPIGQ----------- 210 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~--------~~~~~~L~~-k~~i~~----------- 210 (699)
.++++||.||++||++|....|.++++++++.+. +.|..|+++. .......++ ++++.=
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4789999999999999999999999999999876 5888898852 223333455 443210
Q ss_pred ------------cccc--cccc---EEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 211 ------------IFFR--RGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 211 ------------~f~V--~gyP---Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.+.| .++| +.+++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQV----VDRYYPTTSPLSLERDIKQL 166 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCE----EEeeCCCCCHHHHHHHHHHH
Confidence 0134 6788 55555 66753 34578888888899888776
No 220
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.09 E-value=4e-06 Score=80.93 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=69.6
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccc--------hhhhhHHHHh-CCCC------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIG------------ 209 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~--------~~~~~~L~~k-~~i~------------ 209 (699)
.++++||.||++||+.|+...|.++++++++++. +.|..|+|+. .......+++ +++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4689999999999999999999999999999876 5888888852 2233335555 3211
Q ss_pred --c---cccccccc--------EEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 210 --Q---IFFRRGLP--------SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 210 --~---~f~V~gyP--------Tl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
. .|.+.++| ++++-++|.. ...|.|..+.+.|.+.+.+.
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKV----VGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCE----EEEECTTSCHHHHHHHHHTT
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 0 13367888 5555577754 24577888888888887654
No 221
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.08 E-value=2.4e-06 Score=71.50 Aligned_cols=79 Identities=9% Similarity=0.144 Sum_probs=57.6
Q ss_pred EEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhh-hhHHHHhCCCCcccccccccEEEEcCCCCCCCCcccc
Q 005374 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (699)
Q Consensus 157 lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~-~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~ 235 (699)
++.|+++||++|+++.+.+++++.+..+ +.+..||.+++.. ...++++++.+ +.++|+|. .+|..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~----~~~vP~i~--~~g~~------- 68 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKP----VETVPQIF--VDQQH------- 68 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCC----SCCSCEEE--ETTEE-------
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCC----CceeCeEE--ECCEE-------
Confidence 6789999999999999999999987655 5788899875431 12488888733 56999983 35532
Q ss_pred ccCCcCHHHHHHHHHHH
Q 005374 236 FEGELSVDAVTDWFATA 252 (699)
Q Consensus 236 Y~G~rs~~~Iv~fi~k~ 252 (699)
..| .+.|.+++.+.
T Consensus 69 i~~---~~~l~~~~~~~ 82 (85)
T 1ego_A 69 IGG---YTDFAAWVKEN 82 (85)
T ss_dssp EES---SHHHHHHHHHH
T ss_pred EEC---HHHHHHHHHHh
Confidence 123 36888888764
No 222
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.06 E-value=1e-06 Score=77.40 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=59.8
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeecc--chhhhhHHHHhCCCCcccccccccEEEEcCCCCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG--DIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKS 229 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~--~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~ 229 (699)
...+.++.|+++||++|+.+.|.+++++.. +.+..||.+ ++ ..++++++ . ++|+|+ .+|..
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~~----i~~~~vdi~~~~~---~el~~~~g-~------~vP~l~--~~g~~- 76 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKDR----FILQEVDITLPEN---STWYERYK-F------DIPVFH--LNGQF- 76 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSSS----SEEEEEETTSSTT---HHHHHHSS-S------SCSEEE--ESSSE-
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhhC----CeEEEEECCCcch---HHHHHHHC-C------CCCEEE--ECCEE-
Confidence 456789999999999999999888776532 688999998 44 34888887 6 999873 46632
Q ss_pred CCccccccCCcCHHHHHHHHHHH
Q 005374 230 SDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 230 ~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
. ..|..+.+.|.+++.+.
T Consensus 77 ----~-~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 77 ----L-MMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp ----E-EESSCCHHHHHHHHHSS
T ss_pred ----E-EecCCCHHHHHHHHHHH
Confidence 1 24567888999998765
No 223
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.04 E-value=8.7e-06 Score=76.94 Aligned_cols=92 Identities=10% Similarity=0.027 Sum_probs=68.6
Q ss_pred CCCcEEEEEeccCCCC-CCCcchHHHHHHHHhhc-----ccceeeeeccchh-------------------------hhh
Q 005374 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG-----IANTGMVELGDIR-------------------------LAT 200 (699)
Q Consensus 152 ~~~~~lV~FYapwC~h-Ck~l~p~~~~~A~~L~g-----~~~va~Vdc~~~~-------------------------~~~ 200 (699)
.++++||.||++||++ |....|.++++.++++. .+.|..|+++.+. ...
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4689999999999998 99999999999999963 3577788876211 112
Q ss_pred HHHHhCCCCccccccccc---------------EEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 201 ~L~~k~~i~~~f~V~gyP---------------Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
.+++.|+ |.+.| +++++ ++|.. ...|.|..+.+.|.+.+.+.+
T Consensus 105 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 105 QASHSYR------VYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF----TDYYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp HHHHHSC------CCCEECCCCSSCCCCEECCCEEEEECTTSCE----EEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhC------eEEEecCCCCCCCeEEeccceEEEECCCCeE----EEEECCCCCHHHHHHHHHHHH
Confidence 3667776 55777 65555 66654 245789999999999988763
No 224
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.03 E-value=1.1e-05 Score=78.31 Aligned_cols=97 Identities=10% Similarity=0.026 Sum_probs=68.5
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccc--------hhhhhHHHH-hCCCC------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAE-RKPIG------------ 209 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~--------~~~~~~L~~-k~~i~------------ 209 (699)
.++++||.||++||+.|....|.+.++.+++++. +.|..|+++. .......++ ++++.
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4689999999999999999999999999999876 5788887751 222222333 22221
Q ss_pred --------------ccccccccc---EEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 210 --------------QIFFRRGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 210 --------------~~f~V~gyP---Tl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
..|.+.++| +++++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i----~~~~~g~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCE----EEEECCCCCHHHHHHHHHHH
Confidence 122344666 66666 66653 35678889999999999877
No 225
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=97.98 E-value=7e-06 Score=81.94 Aligned_cols=90 Identities=10% Similarity=0.101 Sum_probs=66.7
Q ss_pred CC-cEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccch--------h------------------hhhHHHH
Q 005374 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------R------------------LATHLAE 204 (699)
Q Consensus 153 ~~-~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~--------~------------------~~~~L~~ 204 (699)
++ ++||.||++||+.|+...|.++++++++++. +.|..|+++.. . ....+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 45 5999999999999999999999999999876 58888888411 0 1233677
Q ss_pred hCCCCcccccccccEEEEc-CCCCCCCCccccccC-----------CcCHHHHHHHHHHHhc
Q 005374 205 RKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEG-----------ELSVDAVTDWFATAIL 254 (699)
Q Consensus 205 k~~i~~~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G-----------~rs~~~Iv~fi~k~v~ 254 (699)
.|+ |.++|+++++ ++|. ..|.| ..+.+.|.+.+.+.+.
T Consensus 138 ~~~------v~~~P~~~liD~~G~------i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 138 AYG------AACTPDFFLYDRERR------LVYHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp HHT------CCEESEEEEECTTCB------EEEEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred HcC------CCCCCeEEEECCCCc------EEEeccccccccccccccCHHHHHHHHHHHHc
Confidence 777 7799999999 4553 23433 3456788888877643
No 226
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.97 E-value=4.4e-06 Score=83.48 Aligned_cols=84 Identities=13% Similarity=0.143 Sum_probs=59.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeee----------------------------------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMV---------------------------------------- 191 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~V---------------------------------------- 191 (699)
+.++.++.|+++||++|+++.|.++++++. + +.|.-+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~-v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--G-ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 567899999999999999999999998753 1 111100
Q ss_pred eccc-hhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 192 ELGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 192 dc~~-~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.|.. -.....++++++ |+|+||+ +|.+|. .+.|..+.+.|.+++.+.
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gtPt~-v~~dG~-------~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 162 SCDVDIADHYALGVQLG------VSGTPAV-VLSNGT-------LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCSCCHHHHHHHHHHHT------CCSSSEE-ECTTSC-------EEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC------CCccCEE-EEcCCe-------EecCCCCHHHHHHHHHHh
Confidence 1321 112234788887 7799999 566663 457888999999988765
No 227
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=97.96 E-value=9.5e-06 Score=76.40 Aligned_cols=97 Identities=8% Similarity=-0.059 Sum_probs=66.6
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccc--------hhhhhHH-HHhCCCCc-----------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHL-AERKPIGQ----------- 210 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~--------~~~~~~L-~~k~~i~~----------- 210 (699)
.++++||.||++||++|....|.++++.+++.+. +.|..|+++. ....... .+++++.=
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4689999999999999999999999999999875 5888888852 1222233 24433210
Q ss_pred ----cc--------c-----cccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 211 ----IF--------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 211 ----~f--------~-----V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.| . |+++|+++++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQP----VKRYSPTTAPYDIEGDIMEL 165 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCE----EEEcCCCCCHHHHHHHHHHH
Confidence 01 2 3445766665 56643 24577888888888888765
No 228
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=97.95 E-value=2.7e-06 Score=78.35 Aligned_cols=69 Identities=6% Similarity=-0.105 Sum_probs=53.0
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhh-h----------------------hHHHHhCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-A----------------------THLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~-~----------------------~~L~~k~~ 207 (699)
.+++++|.||++||++|+...|.+.++.+++.+. +.|..|+++.+.. . ..+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 4689999999999999999999999999998754 4777787774321 0 23555555
Q ss_pred CCcccccccccEEEEcC-CC
Q 005374 208 IGQIFFRRGLPSLVAFP-PG 226 (699)
Q Consensus 208 i~~~f~V~gyPTl~~f~-~g 226 (699)
|.++|+.+++. +|
T Consensus 111 ------v~~~P~~~lid~~G 124 (143)
T 4fo5_A 111 ------LRKGFKNFLINDEG 124 (143)
T ss_dssp ------GGGCCCEEEECTTS
T ss_pred ------CCCCCcEEEECCCC
Confidence 78999988886 45
No 229
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.90 E-value=8.3e-06 Score=78.66 Aligned_cols=96 Identities=5% Similarity=-0.097 Sum_probs=65.2
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccc--------hhhhhHHHHhCCCCc------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAERKPIGQ------------ 210 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~--------~~~~~~L~~k~~i~~------------ 210 (699)
.++++||.||++||+.|....|.++++++++++. +.|..|+++. .......++++++.=
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 4689999999999999999999999999999865 4788888752 123333455543210
Q ss_pred ---cc----------c-----cccccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHH
Q 005374 211 ---IF----------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (699)
Q Consensus 211 ---~f----------~-----V~gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k 251 (699)
.| . |+.+|+++++ ++|.. ...|.|..+.+.|.+++.+
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV----VKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCE----EEEECTTSCTHHHHTTSGG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHHH
Confidence 01 1 3345887666 55643 2456787777777766543
No 230
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.87 E-value=1e-05 Score=77.31 Aligned_cols=33 Identities=3% Similarity=0.094 Sum_probs=29.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG 184 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g 184 (699)
+.++.+|+|+++||+||+++.|..+++.++...
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN 53 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC
Confidence 577899999999999999999999999887644
No 231
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=97.85 E-value=1.8e-05 Score=76.52 Aligned_cols=91 Identities=12% Similarity=0.045 Sum_probs=67.4
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhh----------------------hHHHHhCC
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA----------------------THLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~----------------------~~L~~k~~ 207 (699)
.+++++|.|| ++||++|....|.+.++++++... +.|..|+++..... ..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3589999999 999999999999999999999764 47888887642111 23555555
Q ss_pred CCcccccc------cccEEEEc-CCCCCCCCccccccCC----cCHHHHHHHHHHH
Q 005374 208 IGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (699)
Q Consensus 208 i~~~f~V~------gyPTl~~f-~~g~~~~~~~~~Y~G~----rs~~~Iv~fi~k~ 252 (699)
|. ++|+++++ ++|.. ...+.|. ++.+.|.+.+.+.
T Consensus 110 ------v~~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 110 ------VLNEETGLADRGTFIIDPDGVI----QAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp ------CEETTTTEECEEEEEECTTSBE----EEEEEECTTSCCCTTHHHHHHHHH
T ss_pred ------CCcCCCCceeeEEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 77 89999999 55643 2334453 4788899888765
No 232
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=97.83 E-value=2.1e-05 Score=76.92 Aligned_cols=91 Identities=9% Similarity=0.029 Sum_probs=66.8
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhh-------------------------hHHHH
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~-------------------------~~L~~ 204 (699)
.+++++|.|| ++||++|....|.+.++++++... +.|..|+++..... ..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3578999999 999999999999999999999764 47778887642211 23555
Q ss_pred hCCCCcccccc-----cccEEEEc-CCCCCCCCccccccCCc----CHHHHHHHHHHH
Q 005374 205 RKPIGQIFFRR-----GLPSLVAF-PPGCKSSDCMTRFEGEL----SVDAVTDWFATA 252 (699)
Q Consensus 205 k~~i~~~f~V~-----gyPTl~~f-~~g~~~~~~~~~Y~G~r----s~~~Iv~fi~k~ 252 (699)
.|+ |. ++|+++++ ++|.. ...+.|.. +.+.|.+.+.+.
T Consensus 112 ~~~------v~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYD------VLFEEAIALRGAFLIDKNMKV----RHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTT------CEETTTEECEEEEEEETTTEE----EEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhC------CcccCCcccceEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 555 77 99998888 55643 23344543 788898888765
No 233
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.82 E-value=3.5e-05 Score=68.04 Aligned_cols=97 Identities=23% Similarity=0.232 Sum_probs=67.4
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.+++.+.... +++.++.| .+- |....|.+..++..+. .+.|+.|... +.++++++|+|.+.||+++|
T Consensus 5 i~~~~~f~~~l~~~~-~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d--~~~~l~~~~~V~~~PT~~~~ 80 (105)
T 3zzx_A 5 VKDQEDFTKQLNEAG-NKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVD--ECEDIAQDNQIACMPTFLFM 80 (105)
T ss_dssp CCSHHHHHHHHHHTT-TSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETT--TCHHHHHHTTCCBSSEEEEE
T ss_pred eCCHHHHHHHHHhcC-CCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecc--cCHHHHHHcCCCeecEEEEE
Confidence 445444677776433 56666655 332 2345677777888775 5678887643 35789999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
+++. ....+.| .+.+.|.+||++|+
T Consensus 81 ~~G~-~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 81 KNGQ-KLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp ETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred ECCE-EEEEEeC-cCHHHHHHHHHhcC
Confidence 8643 2223566 58889999999885
No 234
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.81 E-value=2.8e-05 Score=77.28 Aligned_cols=43 Identities=9% Similarity=-0.188 Sum_probs=38.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeecc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~ 194 (699)
.++++||.|||.||+.|....|.++++++++++. +.|..|+|+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 4689999999999999999999999999999876 478888885
No 235
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.80 E-value=1.3e-05 Score=79.90 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=58.3
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhccccee--e----------------e----------------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTG--M----------------V---------------------- 191 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va--~----------------V---------------------- 191 (699)
+.++.++.|+++||+||+++.|.++++++. + +.|- . +
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 567899999999999999999999987652 2 1111 0 0
Q ss_pred eccc-hhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHH
Q 005374 192 ELGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (699)
Q Consensus 192 dc~~-~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k 251 (699)
.|.. -.....++++++ |+|.||+++ .+|. .+.|..+.+.|.+++.+
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gTPt~vi-~nG~-------~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFG------VRGTPSIVT-STGE-------LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHT------CCSSCEEEC-TTSC-------CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC------CCcCCEEEE-eCCE-------EecCCCCHHHHHHHHHh
Confidence 1211 012234777777 779999987 6663 45788899999998865
No 236
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.79 E-value=1.9e-05 Score=77.12 Aligned_cols=97 Identities=11% Similarity=-0.014 Sum_probs=67.2
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhC----------------CCCcccc
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK----------------PIGQIFF 213 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~----------------~i~~~f~ 213 (699)
.+++++|.|| ++||++|....|.+.++++++... +.|..|+++........++++ .+.+.|.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 3679999999 999999999999999999999764 478888876422222222222 0112344
Q ss_pred cc-----cccEEEEcC-CCCCCCCccccccCC----cCHHHHHHHHHHH
Q 005374 214 RR-----GLPSLVAFP-PGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (699)
Q Consensus 214 V~-----gyPTl~~f~-~g~~~~~~~~~Y~G~----rs~~~Iv~fi~k~ 252 (699)
|. ++|+++++. +|.. ...+.|. ++.+.|.+.+.+.
T Consensus 124 v~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEI----QFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBE----EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CcccCCCccceEEEEcCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 88 999999985 5543 2334454 3789999998876
No 237
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.79 E-value=5.9e-05 Score=67.99 Aligned_cols=97 Identities=15% Similarity=0.093 Sum_probs=68.2
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCC---CCCchHHHHHHHHhcc-----CCceEEEEEccccccHhHHhhcCCCCCC
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNTFEVESAP 332 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~-----~~~~Fg~V~~~~~~s~~l~~kf~V~~~P 332 (699)
++..+ ++..+.. .+++.+|.| .+- |....|.+..+|..+. +.+.|+.|.... ..+++++|+|.++|
T Consensus 20 l~~~~-f~~~~~~--~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~P 94 (127)
T 3h79_A 20 LTDET-FDSIVMD--PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK--YPDVIERMRVSGFP 94 (127)
T ss_dssp CCTTT-HHHHHTC--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT--CHHHHHHTTCCSSS
T ss_pred CChhh-HHHHHhC--CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc--cHhHHHhcCCccCC
Confidence 55444 5665542 234555544 432 2335677777776543 457888886433 47899999999999
Q ss_pred EEEEEcCCCCC-ceeecCCCChhHHHHHHHHh
Q 005374 333 AIVFLKDPGVK-PVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 333 tIvlfk~~~~~-pv~y~g~~~~~~L~~fi~~~ 363 (699)
|+++|++++.. +..|.|..+.+.|.+||+++
T Consensus 95 t~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 95 TMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp EEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 99999987653 46789999999999999876
No 238
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.78 E-value=3.1e-05 Score=74.50 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=66.6
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccc--------hhhhhHHHHh-CCCCccc---------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIGQIF--------- 212 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~--------~~~~~~L~~k-~~i~~~f--------- 212 (699)
.++++||.|+++||+.|....|.+.++++++++. +.|..|+++. .......+++ +++.=+.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4679999999999999999999999999999875 4778887642 2233446666 5433111
Q ss_pred ------c-----cccccE-----EEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 213 ------F-----RRGLPS-----LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 213 ------~-----V~gyPT-----l~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
. +.+.|+ +++-++|.. ...|.|..+.+.|.+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 168 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQV----VKFWRPEEPIEVIRPDIAAL 168 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCE----EEEECTTCCGGGTHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCE----EEEECCCCCHHHHHHHHHHH
Confidence 0 012564 666667753 24577877777777777655
No 239
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.75 E-value=2.1e-05 Score=74.20 Aligned_cols=90 Identities=14% Similarity=0.092 Sum_probs=62.3
Q ss_pred CCCc-EEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhh------------------hhHHHHhCCCCc
Q 005374 152 DSKP-WLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL------------------ATHLAERKPIGQ 210 (699)
Q Consensus 152 ~~~~-~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~------------------~~~L~~k~~i~~ 210 (699)
.+++ ++|.|| ++||++|....|.+.++++++++. +.|..|+++.... ...+++.|+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYG--- 103 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTT---
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcC---
Confidence 3555 999999 999999999999999999999865 4777888763221 123566666
Q ss_pred cccccc----ccEEEEcC-CCCCCCCccccccCC----cCHHHHHHHHHH
Q 005374 211 IFFRRG----LPSLVAFP-PGCKSSDCMTRFEGE----LSVDAVTDWFAT 251 (699)
Q Consensus 211 ~f~V~g----yPTl~~f~-~g~~~~~~~~~Y~G~----rs~~~Iv~fi~k 251 (699)
|.+ +|+++++. +|.. ...|.|. ...+.+++.+.+
T Consensus 104 ---v~~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 104 ---AKGFILPARITFVIDKKGII----RHIYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp ---CCCSSSCCCEEEEECTTSBE----EEEEECSSCTTHHHHHHHHHHHH
T ss_pred ---CCCcCcccceEEEECCCCEE----EEEEecCCCCCcCHHHHHHHHHH
Confidence 668 99988884 5543 2345563 344455555543
No 240
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.72 E-value=0.00011 Score=69.34 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=67.3
Q ss_pred CCCcEEEEEeccCCC-CCCCcchHHHHHHHHhhcc---cceeeeeccc----hhhhhHHHHhCCCCc-------------
Q 005374 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEGI---ANTGMVELGD----IRLATHLAERKPIGQ------------- 210 (699)
Q Consensus 152 ~~~~~lV~FYapwC~-hCk~l~p~~~~~A~~L~g~---~~va~Vdc~~----~~~~~~L~~k~~i~~------------- 210 (699)
.+++++|.||++||+ .|....|.+.++.+.+... +.|..|+++. .......++++++.-
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 468999999999999 9999999999999998754 5788888762 122333455554321
Q ss_pred ------------------ccccccccEEEEc-CCCCCCCCccccccCCc--CHHHHHHHHHHH
Q 005374 211 ------------------IFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (699)
Q Consensus 211 ------------------~f~V~gyPTl~~f-~~g~~~~~~~~~Y~G~r--s~~~Iv~fi~k~ 252 (699)
.|.+.+.|+++++ ++|.. ...|.|.. +.+.|.+.+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKV----LKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEE----EEEEESSSSCCHHHHHHHHHHH
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeE----EEEEcCCCCCCHHHHHHHHHHH
Confidence 0235678886666 55543 24456765 578888888776
No 241
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.71 E-value=0.00015 Score=73.80 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=74.2
Q ss_pred ecccchhhhhhhhhcCCCcEEEEEEc--CCCCCchHHHHHHHHhcc--CCceEEEEEccc--cc-cHhHHhhcCCC--CC
Q 005374 261 YYTKESMGKNFLAKTGPHKVKVIFFS--KTGERASPFVRQISRNYW--AYASFAFVLWRE--EE-SSIWWNTFEVE--SA 331 (699)
Q Consensus 261 ~it~~~~~~~Fl~~~~~~~v~vl~f~--~~~~~~~~~~~~~A~~~~--~~~~Fg~V~~~~--~~-s~~l~~kf~V~--~~ 331 (699)
.+++.+ ++..+... ..+.|.|+. +-|. ..|.+..+|..+. ..+.|+.|...+ |+ ..+++++|+|. ++
T Consensus 9 ~Lt~~n-F~~~i~~~--~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~ 84 (240)
T 2qc7_A 9 PLDTVT-FYKVIPKS--KFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESY 84 (240)
T ss_dssp ECCTTH-HHHHGGGC--SEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGC
T ss_pred ECCHHH-HHHHHcCC--CCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCC
Confidence 355554 56666432 234444555 5555 7888888998885 468899987544 32 47899999999 99
Q ss_pred CEEEEEcCCC-CCceeecCCCChhHHHHHHHHhh
Q 005374 332 PAIVFLKDPG-VKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 332 PtIvlfk~~~-~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
|||++|+++. ..+..|.|..+.+.|.+||+.+.
T Consensus 85 PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 85 PVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp SEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9999999866 45778999999999999999884
No 242
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=97.71 E-value=2e-05 Score=73.70 Aligned_cols=89 Identities=11% Similarity=0.002 Sum_probs=60.8
Q ss_pred CC-cEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhh--------------------hhHHHHhCCCC
Q 005374 153 SK-PWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIG 209 (699)
Q Consensus 153 ~~-~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~--------------------~~~L~~k~~i~ 209 (699)
++ +++|.|| ++||++|....|.+.++++++++. +.|..|+++.... ...+++.|+
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-- 112 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYG-- 112 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTT--
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcC--
Confidence 44 8999998 999999999999999999998653 4777888763221 233666666
Q ss_pred cccccc----ccc--EE-EEcCCCCCCCCccccccCCc----CHHHHHHHHHH
Q 005374 210 QIFFRR----GLP--SL-VAFPPGCKSSDCMTRFEGEL----SVDAVTDWFAT 251 (699)
Q Consensus 210 ~~f~V~----gyP--Tl-~~f~~g~~~~~~~~~Y~G~r----s~~~Iv~fi~k 251 (699)
|. ++| ++ ++-++|... ..+.|.. ..+.+++.+.+
T Consensus 113 ----v~~~~~~~p~~~~~lid~~G~i~----~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 113 ----VFNEQAGIANRGTFVVDRSGIIR----FAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp ----CEETTTTEECSEEEEECTTSBEE----EEEECCTTCCCCHHHHHHHHHH
T ss_pred ----CccccCCCeeeeEEEECCCCeEE----EEEecCCCCCCCHHHHHHHHHH
Confidence 77 999 54 444666432 3344543 45666665543
No 243
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.71 E-value=3.4e-05 Score=74.57 Aligned_cols=57 Identities=4% Similarity=-0.166 Sum_probs=44.8
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccc--------hhhhhHHHHhCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAERKPI 208 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~--------~~~~~~L~~k~~i 208 (699)
.++++||.||++||+.|....|.+.++.+++++. +.|..|+++. .......++++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~ 113 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNV 113 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999875 4888888752 1233446666654
No 244
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.70 E-value=0.00015 Score=67.53 Aligned_cols=98 Identities=13% Similarity=0.087 Sum_probs=71.5
Q ss_pred ecccchhhhhhhhhcCCCcEEEEEEc-CCCCC-----chHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEE
Q 005374 261 YYTKESMGKNFLAKTGPHKVKVIFFS-KTGER-----ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAI 334 (699)
Q Consensus 261 ~it~~~~~~~Fl~~~~~~~v~vl~f~-~~~~~-----~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtI 334 (699)
.+++.+ +++++.. ...+.+|.|. +-+.+ ..|.+..+|.+|.+++.|+.|.+. +.++++.+|+|.+.||+
T Consensus 19 ~vt~~~-F~~~v~~--~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvD--e~~~la~~ygV~siPTl 93 (137)
T 2qsi_A 19 LVDEAT-VDDFIAH--SGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAE--AERGLMARFGVAVCPSL 93 (137)
T ss_dssp EECTTT-HHHHHHT--SSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGG--GHHHHHHHHTCCSSSEE
T ss_pred ccCHhH-HHHHHhc--CCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECC--CCHHHHHHcCCccCCEE
Confidence 355544 6776643 2235566664 33333 689999999999999999999753 35889999999999999
Q ss_pred EEEcCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 335 vlfk~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
++||++.. .-...|..+.+.|.++|+.+.
T Consensus 94 ilFkdG~~-v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 94 AVVQPERT-LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEECCEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEE-EEEEeCCCCHHHHHHHHHHHh
Confidence 99997642 223478888889999987654
No 245
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.70 E-value=2.5e-05 Score=71.49 Aligned_cols=95 Identities=6% Similarity=-0.015 Sum_probs=76.4
Q ss_pred EEEec-CCCCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCccccccc
Q 005374 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (699)
Q Consensus 138 V~~Lt-~~nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~g 216 (699)
+..|+ .+.++..+.++.+.+|-|+++||+.| .+.|.++|+.+ ..+.||.++-. . ++++++ +.
T Consensus 23 ~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~~~---~---v~~~~~------v~- 85 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGISTDS---E---VLTHYN------IT- 85 (124)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEECCH---H---HHHHTT------CC-
T ss_pred ceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEChH---H---HHHHcC------CC-
Confidence 34554 46677778888999999999999998 78999999999 66789888643 3 788887 55
Q ss_pred ccEEEEcCCCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 217 LPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 217 yPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
.|+|++|+++.. ....|.| ..+.++|.+|+...
T Consensus 86 ~~~vvlfkkfde---~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 86 GNTICLFRLVDN---EQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp SSCEEEEETTTT---EEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred CCeEEEEEcCCC---CceeecCcccCCCCHHHHHHHHHHh
Confidence 799999998643 2467886 78999999999865
No 246
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.65 E-value=4.7e-06 Score=82.40 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=40.3
Q ss_pred CCCcEEEEEeccCCCCCCCcchHH---HHHHHHhhcccceeeeeccch
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDI 196 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~---~~~A~~L~g~~~va~Vdc~~~ 196 (699)
..++.||+||++||+||+++.|.| +++++.+.+.+.|.+++.+.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 467999999999999999999999 999999987779999998743
No 247
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.65 E-value=2.8e-05 Score=76.04 Aligned_cols=91 Identities=14% Similarity=0.026 Sum_probs=66.1
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhh-------------------------hHHHH
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~-------------------------~~L~~ 204 (699)
.+++++|.|| ++||++|....|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 4678999999 999999999999999999999764 47888888743211 23555
Q ss_pred hCCCCcccccc------cccEEEEc-CCCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 205 RKPIGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 205 k~~i~~~f~V~------gyPTl~~f-~~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
.|+ |. ++|+++++ ++|... ..+.| .++.+.+++++...
T Consensus 113 ~~g------v~~~~~~~~~P~~~lid~~G~i~----~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 113 DYG------VLKTDEGIAYRGLFIIDGKGVLR----QITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HTT------CEETTTTEECEEEEEECTTSBEE----EEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcC------CccCCCCceeeEEEEECCCCcEE----EEEeCCCCCCCCHHHHHHHHHhc
Confidence 555 66 79988877 455422 22334 46788999988765
No 248
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.64 E-value=0.00037 Score=62.56 Aligned_cols=85 Identities=13% Similarity=0.126 Sum_probs=65.2
Q ss_pred CcEEEEEE-cC---CCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~---~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+|.| .+ .|....+.+..++..+.+.+.|+.|.... ...++++|+|.++|++++|++++.....+.|..+.
T Consensus 35 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~ 112 (130)
T 2dml_A 35 DGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADK--HQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTG 112 (130)
T ss_dssp SSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSH
T ss_pred CCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCC--CHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCH
Confidence 34545544 33 34556788888888888888898887533 46799999999999999998876545668898899
Q ss_pred hHHHHHHHHhh
Q 005374 354 SRLSEVMEQNK 364 (699)
Q Consensus 354 ~~L~~fi~~~~ 364 (699)
+.|.+|+.+..
T Consensus 113 ~~l~~~l~~~l 123 (130)
T 2dml_A 113 EAIVDAALSAL 123 (130)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988753
No 249
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.63 E-value=7.8e-05 Score=69.64 Aligned_cols=97 Identities=13% Similarity=0.129 Sum_probs=70.2
Q ss_pred ecccchhhhhhhhhcCCCcEEEEEEc-CCCC-----CchHHHHHHHHhccCC-ceEEEEEccccccHhHHhhcCCCCCCE
Q 005374 261 YYTKESMGKNFLAKTGPHKVKVIFFS-KTGE-----RASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPA 333 (699)
Q Consensus 261 ~it~~~~~~~Fl~~~~~~~v~vl~f~-~~~~-----~~~~~~~~~A~~~~~~-~~Fg~V~~~~~~s~~l~~kf~V~~~Pt 333 (699)
.+++.+ +++++.+ ..+.+|+|. +-+. ...|.+..+|.+|.++ +.|+.|.+. ++++++.+|+|.+.||
T Consensus 21 ~~t~~~-F~~~v~~---~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD--e~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 21 PVSESR-LDDWLTQ---APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE--QSEAIGDRFGAFRFPA 94 (140)
T ss_dssp ECCHHH-HHHHHHT---CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH--HHHHHHHHHTCCSSSE
T ss_pred cCCHHH-HHHHHhC---CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC--CCHHHHHHcCCccCCE
Confidence 455544 6777742 224455663 2222 2689999999999988 999998754 3578999999999999
Q ss_pred EEEEcCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 334 IVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 334 Ivlfk~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
+++||++.. .-...|..+.+.|.++|+.+.
T Consensus 95 lilFk~G~~-v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 95 TLVFTGGNY-RGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp EEEEETTEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEECCEE-EEEEecCCCHHHHHHHHHHHh
Confidence 999998642 223578888889999998654
No 250
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.61 E-value=4.7e-05 Score=74.01 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=64.9
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhh-------------------------hHHHH
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~-------------------------~~L~~ 204 (699)
.+++++|.|| +.||++|....|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 4678999999 999999999999999999999643 47777777632221 22455
Q ss_pred hCCCCcccccc-----cccEEEEc-CCCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 205 RKPIGQIFFRR-----GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 205 k~~i~~~f~V~-----gyPTl~~f-~~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
.|+ |. .+|+++++ ++|... ..+.| .++.+.|.+.+...
T Consensus 110 ~~g------v~~~~g~~~P~~~liD~~G~i~----~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 110 SYD------VLFNESVALRAFVLIDKQGVVQ----HLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HTT------CEETTTEECCEEEEECTTSBEE----EEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HhC------CcCcCCceeeEEEEEcCCCEEE----EEEeCCCCCCCCHHHHHHHHHHH
Confidence 555 77 89999999 555432 22334 35678888887655
No 251
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.60 E-value=0.00015 Score=67.59 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=62.3
Q ss_pred eecccchhhhhhhhhcCCCcEEEEEEc-C-----CCCCchHHHHHHHHhccCCce--EEEEEccccccHhHHhhcCCCCC
Q 005374 260 FYYTKESMGKNFLAKTGPHKVKVIFFS-K-----TGERASPFVRQISRNYWAYAS--FAFVLWREEESSIWWNTFEVESA 331 (699)
Q Consensus 260 ~~it~~~~~~~Fl~~~~~~~v~vl~f~-~-----~~~~~~~~~~~~A~~~~~~~~--Fg~V~~~~~~s~~l~~kf~V~~~ 331 (699)
..+++++ +++++.... ..|++|. . .|....|.+..++.+| +.+. |+.|.... ..+++++|+|.+.
T Consensus 20 ~~l~~~~-f~~~i~~~~---~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~--~~~la~~~~V~~i 92 (142)
T 2es7_A 20 QPVEAST-VDDWIKRVG---DGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQ--SEAIGDRFNVRRF 92 (142)
T ss_dssp EECCCC---------CC---SEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHH--HHHHHHTTTCCSS
T ss_pred ccccccc-HHHHHHhCC---CEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCC--CHHHHHhcCCCcC
Confidence 3455544 677776432 3344553 2 2334678899999988 7888 88886432 4689999999999
Q ss_pred CEEEEEcCCCCCceeecCCCChhHHHHHHHHhhcc
Q 005374 332 PAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 332 PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~~~~ 366 (699)
||+++|+++ +....+.|..+.+.|.+||+...-.
T Consensus 93 PT~~~fk~G-~~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 93 PATLVFTDG-KLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp SEEEEESCC-----CEESCCCHHHHHHHHHHHHC-
T ss_pred CeEEEEeCC-EEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999999754 3334478888889999999876544
No 252
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.60 E-value=0.00014 Score=66.57 Aligned_cols=104 Identities=11% Similarity=0.088 Sum_probs=71.2
Q ss_pred CCcceecccchhhhhhhhhcCCCcEEEEEE-cCCCC--CchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCC--
Q 005374 256 LPRIFYYTKESMGKNFLAKTGPHKVKVIFF-SKTGE--RASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES-- 330 (699)
Q Consensus 256 lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f-~~~~~--~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~-- 330 (699)
+|-+..++..+ ++.++.+ ..+.++.| ...+. ...+.+..+|.+|++++.|+.|... +...+++.|||.+
T Consensus 5 ~plv~~~t~~~-f~~~~~~---~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d--~~~~~a~~~gi~~~~ 78 (133)
T 2djk_A 5 SPLIGEIGPET-YSDYMSA---GIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAK--AFGAHAGNLNLKTDK 78 (133)
T ss_dssp CCCSEECCHHH-HHHHHHT---TSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTT--TTGGGTTTTTCCSSS
T ss_pred cCceeccChHH-HHHHhcC---CCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchH--HhHHHHHHcCCCccc
Confidence 45555566555 4555542 23444444 33222 2467778899999999999999754 3467999999998
Q ss_pred CCEEEEEcC-CCCCceeec--CCCChhHHHHHHHHhhcc
Q 005374 331 APAIVFLKD-PGVKPVVYY--GSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 331 ~PtIvlfk~-~~~~pv~y~--g~~~~~~L~~fi~~~~~~ 366 (699)
.||+++|+. ++.+ .... |.++.+.|.+|++...-.
T Consensus 79 iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~G 116 (133)
T 2djk_A 79 FPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFVAG 116 (133)
T ss_dssp SSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHHHT
T ss_pred CCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHHcC
Confidence 999999996 3333 3333 889999999999875433
No 253
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.59 E-value=0.00035 Score=71.48 Aligned_cols=98 Identities=17% Similarity=0.105 Sum_probs=72.6
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE--cCCCCCchHHHHHHHHhcc---CCceEEEEEccc---cccHhHHhhcCCC--CC
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF--SKTGERASPFVRQISRNYW---AYASFAFVLWRE---EESSIWWNTFEVE--SA 331 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f--~~~~~~~~~~~~~~A~~~~---~~~~Fg~V~~~~---~~s~~l~~kf~V~--~~ 331 (699)
+++.+ ++..+... ..+.|.|+ .+-|. ..|.+..+|..|. +.+.|+.|...+ .+..+++++|+|. ++
T Consensus 21 Lt~~n-F~~vi~~~--~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~ 96 (248)
T 2c0g_A 21 LDELS-FEKTVERF--PYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNF 96 (248)
T ss_dssp CCTTT-HHHHHTTS--SEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSC
T ss_pred CCHHH-HHHHHhcC--CCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCC
Confidence 55555 56665431 23444466 46554 7889999998884 478999997544 1147899999999 99
Q ss_pred CEEEEEcCCC-CCceee--cCCCChhHHHHHHHHhh
Q 005374 332 PAIVFLKDPG-VKPVVY--YGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 332 PtIvlfk~~~-~~pv~y--~g~~~~~~L~~fi~~~~ 364 (699)
|||++|+ +. ..+..| .|..+.+.|.+||+.+.
T Consensus 97 PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 97 PSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp CEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 9999999 55 356778 89999999999999874
No 254
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.56 E-value=0.00023 Score=69.13 Aligned_cols=100 Identities=9% Similarity=0.084 Sum_probs=71.7
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEcC--------C---CCCchHHHHHHHHhcc-----CCceEEEEEccccccHhHHhh
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFFSK--------T---GERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNT 325 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~--------~---~~~~~~~~~~~A~~~~-----~~~~Fg~V~~~~~~s~~l~~k 325 (699)
+++.+ +++++.+. .+.+.||.|.. - |....|.+..+|.+|. +++.|+.|.+.+ .++++++
T Consensus 23 lt~~n-F~~~v~~~-~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~--~~~la~~ 98 (178)
T 3ga4_A 23 VTADN-YPLLSRGV-PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE--VPQLVKD 98 (178)
T ss_dssp CCTTT-HHHHTTCC-TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT--CHHHHHH
T ss_pred CCHHH-HHHHHccc-CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc--CHHHHHH
Confidence 66665 67776532 24455665543 1 1235688888999887 789999997544 6889999
Q ss_pred cCCCCCCEEEEEcCCCCCc-----------eee---cC-CCChhHHHHHHHHhhc
Q 005374 326 FEVESAPAIVFLKDPGVKP-----------VVY---YG-SFNNSRLSEVMEQNKL 365 (699)
Q Consensus 326 f~V~~~PtIvlfk~~~~~p-----------v~y---~g-~~~~~~L~~fi~~~~~ 365 (699)
|+|.+.|||++|++++... ..| .| .++.+.|.+||++..-
T Consensus 99 ~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~ 153 (178)
T 3ga4_A 99 LKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILN 153 (178)
T ss_dssp TTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHT
T ss_pred cCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcC
Confidence 9999999999999876443 334 24 6788899999987543
No 255
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.55 E-value=6.4e-05 Score=75.17 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=65.9
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhh-------------------------hHHHH
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~-------------------------~~L~~ 204 (699)
.++++||.|| +.||+.|....|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 3589999999 999999999999999999999653 47778887642211 23455
Q ss_pred hCCCCcccccc------cccEEEEc-CCCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 205 RKPIGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 205 k~~i~~~f~V~------gyPTl~~f-~~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
.|+ |. ++|+++++ ++|... ..+.| .++.+.|.+.+...
T Consensus 135 ~yg------v~~~~~g~~~P~~~liD~~G~I~----~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 135 DYG------VLLEGPGLALRGLFIIDPNGVIK----HLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HTT------CEETTTTEECEEEEEECTTSBEE----EEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhC------CeecCCCcccceEEEECCCCEEE----EEEecCCCCCCCHHHHHHHHHHh
Confidence 555 77 89999999 455432 22233 36778898888765
No 256
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.52 E-value=2.1e-05 Score=65.20 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=47.0
Q ss_pred EEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccccc
Q 005374 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (699)
Q Consensus 157 lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y 236 (699)
++.|+++||++|+++.+.+++. + +.+..||+++++.......+++ +.++|++. .+|. .
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~-i~~~~vdi~~~~~~~~~~~~~g------~~~vP~~~--~~g~-------~- 60 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----G-FDFEMINVDRVPEAAEALRAQG------FRQLPVVI--AGDL-------S- 60 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEETTTCHHHHHHHHHTT------CCSSCEEE--ETTE-------E-
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----C-CCeEEEECCCCHHHHHHHHHhC------CCccCEEE--ECCE-------E-
Confidence 5789999999999988877753 1 4788899986544333333466 67999984 3552 1
Q ss_pred cCCcCHHHHHHHH
Q 005374 237 EGELSVDAVTDWF 249 (699)
Q Consensus 237 ~G~rs~~~Iv~fi 249 (699)
-|..+.+.|.+++
T Consensus 61 ~~g~~~~~l~~~l 73 (81)
T 1h75_A 61 WSGFRPDMINRLH 73 (81)
T ss_dssp EESCCHHHHGGGS
T ss_pred EecCCHHHHHHHH
Confidence 2334556665554
No 257
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.48 E-value=8e-05 Score=72.50 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=35.1
Q ss_pred cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeec
Q 005374 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (699)
Q Consensus 151 ~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc 193 (699)
...++.+|+|+++||++|+++.|.++++++.+.+.+.+..++.
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~ 65 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPI 65 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEec
Confidence 3578899999999999999999999999988765444545444
No 258
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.47 E-value=0.00032 Score=61.61 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=68.6
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cC---CCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~---~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
++.++ +++.+ .+++.++.| .+ .|....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|
T Consensus 6 l~~~~-~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 6 ATDQS-FSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE--NQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CCTTT-HHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT--CCSHHHHTTCCSBSEEEEE
T ss_pred ecHHH-HHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCCcccEEEEE
Confidence 44444 55555 244556555 33 23445677888888888788999887543 4679999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHhhcc
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~~~~ 366 (699)
++ ++....+.|..+.+.|.+|++.+.-+
T Consensus 79 ~~-G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 79 KD-GEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp ET-TEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred eC-CEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 64 43333478989999999999877544
No 259
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.47 E-value=5.9e-05 Score=74.04 Aligned_cols=97 Identities=9% Similarity=-0.009 Sum_probs=66.1
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhC-------------------CCCc
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------------------PIGQ 210 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~-------------------~i~~ 210 (699)
.+++++|.|| +.||+.|....|.+.+++++++.. +.|..|+++........++++ .+.+
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 3679999999 999999999999999999999764 478888887432222222222 0112
Q ss_pred ccccc------cccEEEEcC-CCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 211 IFFRR------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 211 ~f~V~------gyPTl~~f~-~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
.|.|. ++|+++++. +|... ..+.| .++.+.|.+.+...
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~----~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLR----QITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEE----EEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEE----EEEeCCCCCCCCHHHHHHHHHHh
Confidence 34487 999988884 55432 22223 45778898888765
No 260
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.46 E-value=9.7e-05 Score=59.90 Aligned_cols=71 Identities=10% Similarity=0.018 Sum_probs=48.4
Q ss_pred EEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccccc
Q 005374 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (699)
Q Consensus 157 lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y 236 (699)
++.|+++||++|+++.+.+++. + +.+..+|.++++......++++ +.++|++++ +|. .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~-i~~~~~di~~~~~~~~~~~~~~------~~~vP~l~~--~g~-------~- 60 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----G-LAYNTVDISLDDEARDYVMALG------YVQAPVVEV--DGE-------H- 60 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEETTTCHHHHHHHHHTT------CBCCCEEEE--TTE-------E-
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----C-CCcEEEECCCCHHHHHHHHHcC------CCccCEEEE--CCe-------E-
Confidence 5789999999999988877654 2 4677888886544222223666 669999984 442 1
Q ss_pred cCCcCHHHHHHHH
Q 005374 237 EGELSVDAVTDWF 249 (699)
Q Consensus 237 ~G~rs~~~Iv~fi 249 (699)
-|..+.+.|.+++
T Consensus 61 ~~g~~~~~l~~~l 73 (75)
T 1r7h_A 61 WSGFRPERIKQLQ 73 (75)
T ss_dssp EESCCHHHHHHHH
T ss_pred EcCCCHHHHHHHH
Confidence 2345677777765
No 261
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.45 E-value=6.9e-05 Score=72.77 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=30.9
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhccc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA 186 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~ 186 (699)
+.++.+|+|+++||+||+++.|.+.++.+.+.+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v 58 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADV 58 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCe
Confidence 67889999999999999999999999998875533
No 262
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.39 E-value=0.00039 Score=59.85 Aligned_cols=96 Identities=14% Similarity=0.202 Sum_probs=67.8
Q ss_pred ecccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEE
Q 005374 261 YYTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (699)
Q Consensus 261 ~it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvl 336 (699)
.++.++ ++..+.. +++.++.| .+.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++
T Consensus 8 ~l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~i~~~Pt~~~ 81 (109)
T 3tco_A 8 VLTEEN-FDEVIRN---NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDE--NQKIADKYSVLNIPTTLI 81 (109)
T ss_dssp ECCTTT-HHHHHHH---SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCSSSEEEE
T ss_pred EecHHH-HHHHHhc---CCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEcccc--CHHHHHhcCcccCCEEEE
Confidence 345444 6666654 34656655 3322 234567777888888889999887543 578999999999999999
Q ss_pred EcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 337 fk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
|++ +.....+.|..+.+.|.++|+..
T Consensus 82 ~~~-g~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 82 FVN-GQLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp EET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred EcC-CcEEEeeeccCCHHHHHHHHHHH
Confidence 965 43334478888999999998764
No 263
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.38 E-value=0.00061 Score=62.15 Aligned_cols=83 Identities=19% Similarity=0.303 Sum_probs=62.6
Q ss_pred CcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+|.| ... |....+.+..++..|.+.+.|+.|.... ...++++|+|.++|++++|..++. .+.+.|..+.
T Consensus 51 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~~g~-~~~~~G~~~~ 127 (141)
T 3hxs_A 51 DKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDK--EPELARDFGIQSIPTIWFVPMKGE-PQVNMGALSK 127 (141)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEECSSSC-CEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCC--CHHHHHHcCCCCcCEEEEEeCCCC-EEEEeCCCCH
Confidence 45555554 432 2335677778888898888998887543 478999999999999999976554 3468898999
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.+||+..
T Consensus 128 ~~l~~~l~~~ 137 (141)
T 3hxs_A 128 EQLKGYIDKV 137 (141)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999764
No 264
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.36 E-value=0.0003 Score=68.92 Aligned_cols=100 Identities=7% Similarity=-0.067 Sum_probs=64.9
Q ss_pred CCCcEEEEEeccCCCC-CCCcchHHHHHHHHhhc----ccceeeeeccch-------------------------hhhhH
Q 005374 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDI-------------------------RLATH 201 (699)
Q Consensus 152 ~~~~~lV~FYapwC~h-Ck~l~p~~~~~A~~L~g----~~~va~Vdc~~~-------------------------~~~~~ 201 (699)
.++++||.||+.||++ |....|.+.++.+.+.. .+.|..|+++.. .....
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4689999999999998 99999999998888763 346777777621 01234
Q ss_pred HHHhCCCC--cc--------cccccccE-EEEcCCCCCCCCccccccCCcCHHHHHHHHHHHhcc
Q 005374 202 LAERKPIG--QI--------FFRRGLPS-LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILK 255 (699)
Q Consensus 202 L~~k~~i~--~~--------f~V~gyPT-l~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v~~ 255 (699)
+++.|++. .+ |.+.+.|+ +++-++|.. ...|.|..+.+.+.+.+.+.+..
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i----~~~~~g~~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQF----VDALGRNYDEKTGVDKIVEHVKS 180 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCE----EEEECTTCCTTHHHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcE----EEEeCCCCCHHHHHHHHHHHHHH
Confidence 66677632 00 01112235 444566653 24567878888888888776443
No 265
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.32 E-value=0.00079 Score=65.21 Aligned_cols=33 Identities=12% Similarity=0.175 Sum_probs=29.5
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG 184 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g 184 (699)
+.++.+++|+++||+||.++.|.+.++.+.+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS 53 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC
Confidence 567899999999999999999999999887754
No 266
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.32 E-value=0.0055 Score=61.56 Aligned_cols=99 Identities=13% Similarity=0.087 Sum_probs=66.4
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCC---CCCchHHHHHHHHhccC---CceEEEEEccccccHhHHhhcCCCCCCEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAI 334 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~---~~~Fg~V~~~~~~s~~l~~kf~V~~~PtI 334 (699)
++..+ ++..+.. .+++.+|.| .+- |....|.+..++..+.+ .+.|+.|.........++++|+|.++||+
T Consensus 17 l~~~~-f~~~i~~--~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~ 93 (244)
T 3q6o_A 17 LQADT-VRGAVLG--SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTV 93 (244)
T ss_dssp ECTTT-HHHHHSS--CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEE
T ss_pred CChhh-HHHHHhh--CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEE
Confidence 44444 4444432 234555544 432 33456888889988876 78899987644446789999999999999
Q ss_pred EEEcCCCCC----ceeecCCCChhHHHHHHHHhh
Q 005374 335 VFLKDPGVK----PVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 335 vlfk~~~~~----pv~y~g~~~~~~L~~fi~~~~ 364 (699)
++|+++... .+.+.| .+.+.|.++|....
T Consensus 94 ~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 94 RFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDAL 126 (244)
T ss_dssp EEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHH
T ss_pred EEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHH
Confidence 999975432 223445 68888888887643
No 267
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.31 E-value=0.00048 Score=59.08 Aligned_cols=94 Identities=19% Similarity=0.249 Sum_probs=65.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
++.++ ++..+ .+++.++.| .+.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|
T Consensus 8 l~~~~-~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 3die_A 8 VTDAD-FDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDE--NPSTAAKYEVMSIPTLIVF 80 (106)
T ss_dssp CCTTT-HHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSBSEEEEE
T ss_pred CCHHH-HHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCc--CHHHHHhCCCcccCEEEEE
Confidence 44444 55555 245656655 3322 234567777888888888998887543 5789999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
++ ++....+.|..+.+.|.+||++.
T Consensus 81 ~~-G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 81 KD-GQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp ET-TEEEEEEESCCCHHHHHHHHHTT
T ss_pred eC-CeEEEEEeCCCCHHHHHHHHHHh
Confidence 74 43333468888999999998753
No 268
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.30 E-value=0.00064 Score=61.81 Aligned_cols=97 Identities=19% Similarity=0.203 Sum_probs=68.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEc-C---CCCCchHHHHHHHHhccCC---ceEEEEEccccccHhHHhhcCCCCCCEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFFS-K---TGERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAI 334 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~---~~~~~~~~~~~~A~~~~~~---~~Fg~V~~~~~~s~~l~~kf~V~~~PtI 334 (699)
++..+ ++..+.. +++.+|.|. . .|....+.+..++..+.+. +.|+.|.... ...++++|+|..+|++
T Consensus 22 l~~~~-~~~~~~~---~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~ 95 (140)
T 2dj1_A 22 LNDGN-FDNFVAD---KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS--ASMLASKFDVSGYPTI 95 (140)
T ss_dssp CCTTT-HHHHHTT---CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT--CHHHHHHTTCCSSSEE
T ss_pred cChHh-HHHHHhc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc--cHHHHHHCCCCccCeE
Confidence 44333 5555542 456666663 3 2344677888888877765 7888775432 4789999999999999
Q ss_pred EEEcCCCCCceeecCCCChhHHHHHHHHhhcc
Q 005374 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 335 vlfk~~~~~pv~y~g~~~~~~L~~fi~~~~~~ 366 (699)
++|+++ + ...+.|..+.+.|.+||+...-+
T Consensus 96 ~~~~~G-~-~~~~~g~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 96 KILKKG-Q-AVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp EEEETT-E-EEECCSCCCHHHHHHHHHHHHSS
T ss_pred EEEECC-c-EEEcCCCCCHHHHHHHHHHhcCC
Confidence 999754 3 55678989999999999887554
No 269
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.26 E-value=0.0015 Score=56.99 Aligned_cols=97 Identities=18% Similarity=0.180 Sum_probs=67.5
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-c---CCCCCchHHHHHHHHhcc---CCceEEEEEccccccHhHHhhcCCCCCCEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-S---KTGERASPFVRQISRNYW---AYASFAFVLWREEESSIWWNTFEVESAPAI 334 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~---~~~~~~~~~~~~~A~~~~---~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtI 334 (699)
++..+ ++..+.. +++.++.| . ..|....+.+..++..+. ..+.|+.+.... ...++++|+|.+.|++
T Consensus 12 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 12 LRKSN-FAEALAA---HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE--ESDLAQQYGVRGYPTI 85 (120)
T ss_dssp CCTTT-HHHHHHH---CSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT--CCSSHHHHTCCSSSEE
T ss_pred echhh-HHHHHcc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC--CHHHHHHCCCCcccEE
Confidence 44444 5555543 34555555 3 345557788888888776 357788776433 3579999999999999
Q ss_pred EEEcCCCC-CceeecCCCChhHHHHHHHHhh
Q 005374 335 VFLKDPGV-KPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 335 vlfk~~~~-~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
++|+++.. .+..+.|..+.+.|.+|++.+.
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 99976543 2356789889999999998754
No 270
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.25 E-value=0.00066 Score=60.19 Aligned_cols=93 Identities=24% Similarity=0.311 Sum_probs=63.7
Q ss_pred chhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCC
Q 005374 265 ESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP 340 (699)
Q Consensus 265 ~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~ 340 (699)
.+.+++.+.... +++.+|.| ..-| ....+.+..++..|.+ +.|+.|.... ...++++|+|.+.|++++|++
T Consensus 19 ~~~f~~~l~~~~-~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~- 93 (116)
T 3qfa_C 19 KTAFQEALDAAG-DKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDD--CQDVASECEVKSMPTFQFFKK- 93 (116)
T ss_dssp HHHHHHHHHHHT-TSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTT--THHHHHHTTCCSSSEEEEESS-
T ss_pred HHHHHHHHHhcC-CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC--CHHHHHHcCCccccEEEEEeC-
Confidence 333666666433 34555544 4322 3345677778888866 8888887543 578999999999999999965
Q ss_pred CCCceeecCCCChhHHHHHHHHh
Q 005374 341 GVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 341 ~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
++....+.|. +.+.|.++|++.
T Consensus 94 G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 94 GQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp SSEEEEEESC-CHHHHHHHHHHH
T ss_pred CeEEEEEcCC-CHHHHHHHHHHh
Confidence 3333346787 889999998753
No 271
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.20 E-value=0.00034 Score=65.49 Aligned_cols=98 Identities=11% Similarity=0.069 Sum_probs=61.5
Q ss_pred CCCcEEEEEec-cCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhCCCC------------ccccccc-
Q 005374 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIG------------QIFFRRG- 216 (699)
Q Consensus 152 ~~~~~lV~FYa-pwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~~i~------------~~f~V~g- 216 (699)
.+++++|.||+ .||++|....|.+.++.+++++. +.|..|.++........++++++. +.|.|..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 35689999998 99999999999999999999765 477777776332222233332211 1223545
Q ss_pred -----------ccEEEEcCCCCCCCCccccccC---CcCHHHHHHHHHHH
Q 005374 217 -----------LPSLVAFPPGCKSSDCMTRFEG---ELSVDAVTDWFATA 252 (699)
Q Consensus 217 -----------yPTl~~f~~g~~~~~~~~~Y~G---~rs~~~Iv~fi~k~ 252 (699)
.|+.+++-..+.. ...|.| ....+.|++.+.+.
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i---~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQV---VQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCE---EEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeE---EEEEcCCCcccCHHHHHHHHHHH
Confidence 8998888543332 122333 34456666666543
No 272
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.20 E-value=0.00085 Score=66.08 Aligned_cols=73 Identities=16% Similarity=0.225 Sum_probs=58.6
Q ss_pred CchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHhhcc
Q 005374 291 RASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 291 ~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~~~~ 366 (699)
...+.+..++..+.+.+.|+.|.... ...++++|+|.++||+++|++ +.....+.|..+.+.|.+||+...-.
T Consensus 131 ~~~p~~~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~i~~~l~~ 203 (210)
T 3apq_A 131 DLAPTWREFAKEVDGLLRIGAVNCGD--DRMLCRMKGVNSYPSLFIFRS-GMAAVKYNGDRSKESLVAFAMQHVRS 203 (210)
T ss_dssp HHHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEECT-TSCCEECCSCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCceEEEEEECCc--cHHHHHHcCCCcCCeEEEEEC-CCceeEecCCCCHHHHHHHHHHhCcc
Confidence 35677778888888889999887543 478999999999999999965 44455678989999999999987655
No 273
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.19 E-value=0.00022 Score=71.25 Aligned_cols=97 Identities=11% Similarity=0.031 Sum_probs=64.3
Q ss_pred CCCcEEEEEec-cCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhC-------------------CCCc
Q 005374 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------------------PIGQ 210 (699)
Q Consensus 152 ~~~~~lV~FYa-pwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~-------------------~i~~ 210 (699)
.++++||.||+ .||++|....|.+.++.+++++. +.|..|+++........++++ .+.+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 46899999996 99999999999999999999765 478888887432222222221 0112
Q ss_pred ccccc------cccEEEEcC-CCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 211 IFFRR------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 211 ~f~V~------gyPTl~~f~-~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
.|.|. .+|+.+++- +|... ..+.| .+..+.+++.+...
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~----~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILR----QITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEE----EEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEE----EEEecCCCCCCCHHHHHHHHHHh
Confidence 34476 889988885 45321 22333 24577777777543
No 274
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.19 E-value=0.002 Score=66.23 Aligned_cols=101 Identities=10% Similarity=0.176 Sum_probs=72.9
Q ss_pred ceecccchhhhhhhhhcCCCcEEEE-EEc---CCCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEE
Q 005374 259 IFYYTKESMGKNFLAKTGPHKVKVI-FFS---KTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAI 334 (699)
Q Consensus 259 ~~~it~~~~~~~Fl~~~~~~~v~vl-~f~---~~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtI 334 (699)
+..++..+ ++..+.... +++.+| |+. ..|....|.+..++.++.+.+.|+.|.... ...++++|+|.++||+
T Consensus 9 v~~~~~~~-f~~~~~~~~-~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 9 IVNINESN-LQQVLEQSM-TTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA--EQMIAAQFGLRAIPTV 84 (287)
T ss_dssp EEECCTTT-HHHHHTTTT-TSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTT--CHHHHHTTTCCSSSEE
T ss_pred cEECCHHH-HHHHHHhcC-CCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCcc--CHHHHHHcCCCCCCeE
Confidence 33456555 666665322 445555 443 355667899999999998889999987543 4789999999999999
Q ss_pred EEEcCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 335 vlfk~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
++|+++ .....+.|..+.+.+..|+....
T Consensus 85 ~~~~~G-~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQNG-QPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEETT-EEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEECC-EEEEEeeCCCCHHHHHHHHHHHc
Confidence 999753 32234788888899999998763
No 275
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.19 E-value=0.00074 Score=60.62 Aligned_cols=97 Identities=15% Similarity=0.123 Sum_probs=66.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCC---CCCchHHHHHHHHhcc----CCceEEEEEccccccHhHHhhcCCCCCCE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYW----AYASFAFVLWREEESSIWWNTFEVESAPA 333 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~----~~~~Fg~V~~~~~~s~~l~~kf~V~~~Pt 333 (699)
++..+ ++..+.. .+++.+|.| ... |....+.+..++..+. +.+.|+.|.... ...++++|+|.++|+
T Consensus 12 l~~~~-~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt 86 (133)
T 1x5d_A 12 LTDDS-FDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV--NQVLASRYGIRGFPT 86 (133)
T ss_dssp CCTTH-HHHHTTT--SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT--CCHHHHHHTCCSSSE
T ss_pred cCHhh-HHHHHhc--CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC--CHHHHHhCCCCeeCe
Confidence 44443 4444322 245656655 332 3345677777888776 678888886543 467999999999999
Q ss_pred EEEEcCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 334 IVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 334 Ivlfk~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
+++|++ +.....+.|..+.+.|.+|+.+..
T Consensus 87 ~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 87 IKIFQK-GESPVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp EEEEET-TEEEEEECSCCSHHHHHHHHHHHH
T ss_pred EEEEeC-CCceEEecCCCCHHHHHHHHHHHh
Confidence 999987 444445789889999999998754
No 276
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.17 E-value=0.00065 Score=58.85 Aligned_cols=96 Identities=16% Similarity=0.329 Sum_probs=66.3
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
++.++ ++..+.. .+++.++.| .+.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|
T Consensus 9 l~~~~-~~~~~~~--~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 83 (111)
T 3gnj_A 9 LDTNT-FEQLIYD--EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEE--EKTLFQRFSLKGVPQILYF 83 (111)
T ss_dssp CCHHH-HHHHHTT--SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCSSCEEEEE
T ss_pred cCHHH-HHHHHHh--cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCc--ChhHHHhcCCCcCCEEEEE
Confidence 44333 5555522 234555544 4332 234567777888888789999987543 5789999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++ +....+.|..+.+.|.+||++.
T Consensus 84 ~~g-~~~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 84 KDG-EYKGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp ETT-EEEEEEESSCCHHHHHHHHHHH
T ss_pred ECC-EEEEEEeccCCHHHHHHHHHHH
Confidence 754 3333468888999999999865
No 277
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=97.17 E-value=0.0089 Score=67.47 Aligned_cols=100 Identities=12% Similarity=0.095 Sum_probs=68.6
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cC---CCCCchHHHHHHHHhccC---CceEEEEEccccccHhHHhhcCCCCCCEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SK---TGERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAI 334 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~---~~~~~~~~~~~~A~~~~~---~~~Fg~V~~~~~~s~~l~~kf~V~~~PtI 334 (699)
++..+ ++..+.. .+++.+|.| .+ .|....|.+..++.++.+ .+.|+.|.....+..+++++|+|.++||+
T Consensus 17 Lt~~~-f~~~v~~--~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl 93 (519)
T 3t58_A 17 LDADS-VRPTVLG--SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTV 93 (519)
T ss_dssp ECTTT-HHHHHSS--CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEE
T ss_pred CChHH-HHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEE
Confidence 44444 4444432 234555544 33 233467888889988877 78899987654445789999999999999
Q ss_pred EEEcCCCC---CceeecCCCChhHHHHHHHHhh
Q 005374 335 VFLKDPGV---KPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 335 vlfk~~~~---~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
++|+++.. ....+.|..+.+.|.++|....
T Consensus 94 ~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 94 RFFQAFTKNGSGATLPGAGANVQTLRMRLIDAL 126 (519)
T ss_dssp EEECTTCCSCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred EEEcCcccCCCceeEecCCCCHHHHHHHHHHHH
Confidence 99997432 2334577788888988887653
No 278
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.17 E-value=0.00091 Score=60.98 Aligned_cols=86 Identities=16% Similarity=0.286 Sum_probs=62.9
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+|.| ...| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|..+++ .+.+.|..+.
T Consensus 38 ~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~G~-~~~~~G~~~~ 114 (136)
T 2l5l_A 38 DKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEK--EQELAGAFGIRSIPSILFIPMEGK-PEMAQGAMPK 114 (136)
T ss_dssp SSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSCEEEEECSSSC-CEEEESCCCH
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCC--CHHHHHHcCCCCCCEEEEECCCCc-EEEEeCCCCH
Confidence 34555555 4322 224566777888888788898887543 468999999999999999944443 3467898999
Q ss_pred hHHHHHHHHhhcc
Q 005374 354 SRLSEVMEQNKLQ 366 (699)
Q Consensus 354 ~~L~~fi~~~~~~ 366 (699)
+.|.+||++..-.
T Consensus 115 ~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 115 ASFKKAIDEFLLK 127 (136)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhhc
Confidence 9999999887544
No 279
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.16 E-value=0.0021 Score=64.64 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=40.7
Q ss_pred CCCcEEEEEe-ccCCCCCC-CcchHHHHHHHHhhcc-c-ceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk-~l~p~~~~~A~~L~g~-~-~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.|| +.||+.|. .-.|.+.+++++++.. + .|..|+.+........+++++
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 91 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEK 91 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcC
Confidence 3578899999 99999999 9999999999998643 4 567777664333333444443
No 280
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.16 E-value=0.00098 Score=59.57 Aligned_cols=96 Identities=16% Similarity=0.117 Sum_probs=67.0
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEcCCC---CCchHHHHHHHHhccC-CceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~~~---~~~~~~~~~~A~~~~~-~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
++..+ ++..+.+ .+.|.|+...| ....+.+..++..+.+ .+.|+.|.... ...++++|+|.++||+++|
T Consensus 12 l~~~~-f~~~~~~----~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 84 (126)
T 1x5e_A 12 ITDEN-WRELLEG----DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE--QPGLSGRFIINALPTIYHC 84 (126)
T ss_dssp CCTTT-HHHHTSS----EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred ecHHH-HHHHhCC----CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC--CHHHHHHcCCcccCEEEEE
Confidence 44444 5555532 25444554432 2345677777777765 68888886543 4679999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHhhcc
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~~~~ 366 (699)
+++. ...+.|..+.+.|.+||+.....
T Consensus 85 ~~G~--~~~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 85 KDGE--FRRYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp ETTE--EEECCSCCCHHHHHHHHHTCGGG
T ss_pred eCCe--EEEeecCCCHHHHHHHHHHHhhc
Confidence 6543 45678989999999999987655
No 281
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.15 E-value=0.00023 Score=72.21 Aligned_cols=88 Identities=9% Similarity=0.006 Sum_probs=57.9
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeee---------------------------------------
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--------------------------------------- 192 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vd--------------------------------------- 192 (699)
+.++.++.|+++||++|+++.|..+++.+. +.++|..+.
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 466789999999999999999998877654 322222111
Q ss_pred -------cc-chhhhhHHHHhCCCCcccccccccEEEEcCC-CCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 193 -------LG-DIRLATHLAERKPIGQIFFRRGLPSLVAFPP-GCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 193 -------c~-~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~-g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|. .-.....++++++ |+|+||+++... |. +....|..+.+.|.+++.+.
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~g------v~gtPt~vi~~~~G~-----~~~~~G~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLG------ANVTPAIYYMSKENT-----LQQAVGLPDQKTLNIIMGNK 231 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHT------CCSSCEEEEEETTTE-----EEEEESSCCHHHHHHHTTC-
T ss_pred cccCCHHHHHHHHHHHHHHHHcC------CCCCCEEEEECCCCC-----EEEecCCCCHHHHHHHHHHH
Confidence 11 0011223667777 779999999753 42 23457888999888887543
No 282
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.14 E-value=0.0018 Score=55.42 Aligned_cols=96 Identities=22% Similarity=0.263 Sum_probs=64.5
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.++..+.... +++.++.| .+.| ....+.+..++..+.+ +.|+.|.... ...++++|+|.+.|++++|
T Consensus 5 i~~~~~~~~~l~~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 80 (105)
T 3m9j_A 5 IESKTAFQEALDAAG-DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDD--CQDVASESEVKSMPTFQFF 80 (105)
T ss_dssp CCSHHHHHHHHHHTT-TSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTT--CHHHHHHTTCCBSSEEEEE
T ss_pred cCCHHHHHHHHHhcC-CCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhh--hHHHHHHcCCCcCcEEEEE
Confidence 344444666665433 44555555 4332 2345667778887765 8888886533 5789999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++ .....+.|. +.+.|.+++++.
T Consensus 81 ~~g-~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 81 KKG-QKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp ETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred ECC-eEEEEEeCC-CHHHHHHHHHHh
Confidence 654 333346777 889999998764
No 283
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.13 E-value=7.9e-05 Score=64.96 Aligned_cols=67 Identities=9% Similarity=0.074 Sum_probs=44.9
Q ss_pred cccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchh----hhhHHHHhCCCCcccccccccEEEE
Q 005374 147 PSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSLVA 222 (699)
Q Consensus 147 ~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~----~~~~L~~k~~i~~~f~V~gyPTl~~ 222 (699)
++.+.++ .++.|+++||++|+++.+.+++++.... .+..+|++.+. ....|++.++ +.++|+|+
T Consensus 6 ~~~i~~~--~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP~i~- 73 (105)
T 1kte_A 6 NSKIQPG--KVVVFIKPTCPFCRKTQELLSQLPFKEG---LLEFVDITATSDTNEIQDYLQQLTG------ARTVPRVF- 73 (105)
T ss_dssp HHHCCTT--CEEEEECSSCHHHHHHHHHHHHSCBCTT---SEEEEEGGGSTTHHHHHHHHHHHHS------CCCSCEEE-
T ss_pred HhhcccC--CEEEEEcCCCHhHHHHHHHHHHcCCCCC---ccEEEEccCCCCHHHHHHHHHHHhC------CCCcCeEE-
Confidence 3445443 3677999999999999988877643321 27778887542 1234777777 66999974
Q ss_pred cCCC
Q 005374 223 FPPG 226 (699)
Q Consensus 223 f~~g 226 (699)
.+|
T Consensus 74 -~~g 76 (105)
T 1kte_A 74 -IGK 76 (105)
T ss_dssp -ETT
T ss_pred -ECC
Confidence 355
No 284
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.12 E-value=0.001 Score=57.10 Aligned_cols=95 Identities=18% Similarity=0.220 Sum_probs=64.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
++..+ ++..+.. +++.+++| .+.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|
T Consensus 6 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 79 (109)
T 2yzu_A 6 VTDQN-FDETLGQ---HPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE--NPKTAMRYRVMSIPTVILF 79 (109)
T ss_dssp CCTTT-HHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred ccHhH-HHHHhcC---CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC--CHhHHHhCCCCcCCEEEEE
Confidence 44444 4555543 34556555 3322 223566777888888778888887543 4689999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++ +....+.|..+.+.|.+|++..
T Consensus 80 ~~g-~~~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 80 KDG-QPVEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp ETT-EEEEEEESCCCHHHHHHHHHTT
T ss_pred eCC-cEeeeEeCCCCHHHHHHHHHHH
Confidence 643 3333468888889999998764
No 285
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.11 E-value=0.0015 Score=56.75 Aligned_cols=83 Identities=13% Similarity=0.209 Sum_probs=60.0
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+++| ...| ....+.+..++..+.+.+.|+.|.... ...++++|+|...|++++|++ +.....+.|..+.
T Consensus 25 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~ 101 (115)
T 1thx_A 25 EQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDP--NPTTVKKYKVEGVPALRLVKG-EQILDSTEGVISK 101 (115)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTT--CHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCC--CHHHHHHcCCCceeEEEEEcC-CEEEEEecCCCCH
Confidence 44555554 4332 234566777888888788999887543 468999999999999999964 4333346888888
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.+||++.
T Consensus 102 ~~l~~~l~~~ 111 (115)
T 1thx_A 102 DKLLSFLDTH 111 (115)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 286
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.11 E-value=0.00089 Score=60.26 Aligned_cols=73 Identities=15% Similarity=0.302 Sum_probs=50.5
Q ss_pred CCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 288 TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 288 ~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
.+....|.+..++..+.+.+.|+.|.... ...++++|+|.++|++++|++ ++....+.|..+.+.|.+||+..
T Consensus 49 ~C~~~~p~~~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 49 PCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp CCCTTHHHHTTC-------CEEEEEETTS--CTTTGGGGTCCBSSEEEEEES-SSEEEEEESCCCHHHHHHHHTTT
T ss_pred CcHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEEC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 44456788877888887778888887543 467999999999999999964 43333478888899999998753
No 287
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.11 E-value=0.0008 Score=57.74 Aligned_cols=83 Identities=18% Similarity=0.235 Sum_probs=59.5
Q ss_pred CcEEEEEEc-CCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+++|. +.| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ ++....+.|..+.
T Consensus 20 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 96 (107)
T 2i4a_A 20 SGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD--NPETPNAYQVRSIPTLMLVRD-GKVIDKKVGALPK 96 (107)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT--CCHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC--CHHHHHhcCCCccCEEEEEeC-CEEEEEecCCCCH
Confidence 456666554 322 223566667888887778888887543 467999999999999999964 4333346888899
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.+||+++
T Consensus 97 ~~l~~~l~~~ 106 (107)
T 2i4a_A 97 SQLKAWVESA 106 (107)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999764
No 288
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.10 E-value=0.00093 Score=57.76 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=63.1
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhcc---CCceEEEEEccccccHhHHhhcCCCCCCEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYW---AYASFAFVLWREEESSIWWNTFEVESAPAI 334 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~---~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtI 334 (699)
++..+ +++.+. +++.++.| ...| ....+.+..++..+. ..+.|+.|... ....++++|+|.+.|++
T Consensus 10 l~~~~-~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 10 LTENN-FDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT--AERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCTTT-HHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT--TCHHHHHHTTCCSSSEE
T ss_pred cChhh-HHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc--ccHhHHHhcCCCcccEE
Confidence 45444 666665 23545544 4332 224566666776654 35667777543 34789999999999999
Q ss_pred EEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 335 vlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
++|+++ .....+.|..+.+.|.+||+++
T Consensus 83 ~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGG-KKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEETT-EEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEeCC-cEEEeccCCcCHHHHHHHHHhc
Confidence 999764 3334578888999999999875
No 289
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.08 E-value=0.0011 Score=61.15 Aligned_cols=91 Identities=14% Similarity=0.176 Sum_probs=65.4
Q ss_pred hhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCC
Q 005374 268 GKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (699)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~ 343 (699)
++..+. .+++.+|.| ...+ ....+.+..++..+.+.+.|+.|.... ...++++|+|.++|++++|++ ++.
T Consensus 48 ~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~ 121 (148)
T 3p2a_A 48 LDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEA--EPALSTRFRIRSIPTIMLYRN-GKM 121 (148)
T ss_dssp HHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEET-TEE
T ss_pred HHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcC--CHHHHHHCCCCccCEEEEEEC-CeE
Confidence 555552 344555544 4322 234577778888888889998886543 578999999999999999975 333
Q ss_pred ceeecCCCChhHHHHHHHHhh
Q 005374 344 PVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 344 pv~y~g~~~~~~L~~fi~~~~ 364 (699)
...+.|..+.+.|.+||+...
T Consensus 122 ~~~~~G~~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 122 IDMLNGAVPKAPFDNWLDEQL 142 (148)
T ss_dssp EEEESSCCCHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHh
Confidence 334789899999999998753
No 290
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.08 E-value=0.00042 Score=59.99 Aligned_cols=82 Identities=12% Similarity=0.200 Sum_probs=50.6
Q ss_pred CcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.++.| .+- |....|.+..++..| +.+.|+.|.... ...++++|+|.+.||+++|++ ++....+.|..+.
T Consensus 18 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~ 93 (105)
T 4euy_A 18 QQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQD--MQEIAGRYAVFTGPTVLLFYN-GKEILRESRFISL 93 (105)
T ss_dssp SSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECC--C---------CCCCEEEEEET-TEEEEEEESSCCH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCC--CHHHHHhcCCCCCCEEEEEeC-CeEEEEEeCCcCH
Confidence 45666655 332 233567777788877 468888886543 468999999999999999985 3333345888899
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.++++..
T Consensus 94 ~~l~~~l~~~ 103 (105)
T 4euy_A 94 ENLERTIQLF 103 (105)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 291
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.07 E-value=0.0008 Score=59.77 Aligned_cols=83 Identities=14% Similarity=0.172 Sum_probs=59.0
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+|+| ...| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|++ ++....+.|..+.
T Consensus 31 ~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 107 (119)
T 1w4v_A 31 ETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD--HTDLAIEYEVSAVPTVLAMKN-GDVVDKFVGIKDE 107 (119)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTT--THHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCC--CHHHHHHcCCCcccEEEEEeC-CcEEEEEcCCCCH
Confidence 44555555 4322 224566677888887788898887543 467999999999999999964 3333346888889
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.+||++.
T Consensus 108 ~~l~~~l~~~ 117 (119)
T 1w4v_A 108 DQLEAFLKKL 117 (119)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998754
No 292
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.06 E-value=0.00029 Score=70.03 Aligned_cols=91 Identities=13% Similarity=0.068 Sum_probs=63.5
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhh-------------------------hHHHH
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~-------------------------~~L~~ 204 (699)
.++++||.|| +.||+.|....|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 4578999999 999999999999999999999643 46777777632221 22445
Q ss_pred hCCCCcccccc-----cccEEEEcC-CCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 205 RKPIGQIFFRR-----GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 205 k~~i~~~f~V~-----gyPTl~~f~-~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
.|+ |. .+|+++++- +|... ..+.| .++.+.|.+.+...
T Consensus 131 ~yg------v~~~~g~~~p~~~lID~~G~i~----~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 131 DYN------VLFDDSVSLRAFVLIDMNGIVQ----HLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HTT------CEETTTEECEEEEEECTTSBEE----EEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhC------CccccCCcccEEEEECCCCEEE----EEEecCCCCCCCHHHHHHHHHHH
Confidence 554 77 799887774 55321 22223 35688898888765
No 293
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.06 E-value=0.0013 Score=55.71 Aligned_cols=89 Identities=19% Similarity=0.269 Sum_probs=61.5
Q ss_pred hhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCC
Q 005374 268 GKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (699)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~ 343 (699)
++..+.. +++.+++| .+.| ....+.+..++..+.+ +.|+.+.... ...++++|+|.+.|++++|+++ ..
T Consensus 9 ~~~~~~~---~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g-~~ 81 (104)
T 2e0q_A 9 FDSFLAS---HEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDE--NPDIAARYGVMSLPTVIFFKDG-EP 81 (104)
T ss_dssp HHHHHHH---SSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSCEEEEEETT-EE
T ss_pred HHHHHhc---CCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCC--CHHHHHhCCccccCEEEEEECC-eE
Confidence 5555543 34556655 3322 2235666777877766 8888887543 4679999999999999999653 33
Q ss_pred ceeecCCCChhHHHHHHHHh
Q 005374 344 PVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 344 pv~y~g~~~~~~L~~fi~~~ 363 (699)
...+.|..+.+.|.+|++..
T Consensus 82 ~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 82 VDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp EEEEESCCCHHHHHHHHHHH
T ss_pred hhhccCCCCHHHHHHHHHHH
Confidence 33468888889999998764
No 294
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.04 E-value=0.00068 Score=57.26 Aligned_cols=56 Identities=11% Similarity=0.154 Sum_probs=40.5
Q ss_pred EEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhC-CCCcccccccccEEEEcCCC
Q 005374 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERK-PIGQIFFRRGLPSLVAFPPG 226 (699)
Q Consensus 156 ~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~-~i~~~f~V~gyPTl~~f~~g 226 (699)
-++.|+++||++|+++.+.+++.. +.+..+|.+ ......+.+.+ + +.++|+|++ +|
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~-~~~~~~l~~~~~~------~~~vP~l~~--~g 63 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDAS-TSLRQEMVQRANG------RNTFPQIFI--GD 63 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSC-HHHHHHHHHHHHS------SCCSCEEEE--TT
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECC-HHHHHHHHHHhCC------CCCcCEEEE--CC
Confidence 467899999999999888777652 356777877 22333477777 7 569999853 55
No 295
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.04 E-value=0.0006 Score=61.41 Aligned_cols=84 Identities=18% Similarity=0.187 Sum_probs=61.3
Q ss_pred CCcEEEEEEc-CC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCC
Q 005374 277 PHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (699)
Q Consensus 277 ~~~v~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~ 352 (699)
.+++.+|.|. .. |....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|++ ++....+.|..+
T Consensus 41 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~ 117 (128)
T 3ul3_B 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDK--NESLARKFSVKSLPTIILLKN-KTMLARKDHFVS 117 (128)
T ss_dssp CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGG--CHHHHHHTTCCSSSEEEEEET-TEEEEEESSCCC
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCCcCEEEEEEC-CEEEEEecCCCC
Confidence 3556666553 32 2334677777888888788888887543 478999999999999999964 433344688899
Q ss_pred hhHHHHHHHHh
Q 005374 353 NSRLSEVMEQN 363 (699)
Q Consensus 353 ~~~L~~fi~~~ 363 (699)
.+.|.+||+++
T Consensus 118 ~~~l~~~l~~~ 128 (128)
T 3ul3_B 118 SNDLIALIKKH 128 (128)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhC
Confidence 99999998753
No 296
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.04 E-value=0.001 Score=57.31 Aligned_cols=83 Identities=14% Similarity=0.261 Sum_probs=59.6
Q ss_pred CcEEEEEEc-CCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.++.|. +.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|++ ++....+.|..+.
T Consensus 20 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 96 (108)
T 2trx_A 20 DGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSK 96 (108)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CTTHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCcccCEEEEEeC-CEEEEEEecCCCH
Confidence 456666553 322 224566777888887788888886543 467999999999999999964 3333346888888
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.+||++.
T Consensus 97 ~~l~~~l~~~ 106 (108)
T 2trx_A 97 GQLKEFLDAN 106 (108)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 297
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.04 E-value=0.00054 Score=60.75 Aligned_cols=84 Identities=7% Similarity=0.009 Sum_probs=59.7
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCC---
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS--- 350 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~--- 350 (699)
+++.++.| .+.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|++++. ...+.|.
T Consensus 21 ~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~~~~-~~~~~g~~~~ 97 (122)
T 3aps_A 21 KTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQA--YPQTCQKAGIKAYPSVKLYQYERA-KKSIWEEQIN 97 (122)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEEGG-GTEEEEEEEC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcC--CHHHHHHcCCCccceEEEEeCCCc-cceeeccccC
Confidence 44555555 4322 234567777888888788999887543 467999999999999999977554 3334443
Q ss_pred -CChhHHHHHHHHhh
Q 005374 351 -FNNSRLSEVMEQNK 364 (699)
Q Consensus 351 -~~~~~L~~fi~~~~ 364 (699)
.+.+.|.+||+...
T Consensus 98 ~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 98 SRDAKTIAALIYGKL 112 (122)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 78899999998653
No 298
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.03 E-value=0.0028 Score=54.16 Aligned_cols=97 Identities=25% Similarity=0.262 Sum_probs=64.2
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.++..+.... +++.++.| .+.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|
T Consensus 5 l~~~~~~~~~l~~~~-~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 5 VKDKADLDGQLTKAS-GKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDE--CEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp CCSHHHHHHHHHHHT-TSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhcC-CCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccc--hHHHHHHcCCCcccEEEEE
Confidence 444333566565322 44556555 4322 224566677888887778888886533 4689999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++ +....+.| .+.+.|.+||++.
T Consensus 82 ~~G-~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 82 KNG-VKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp ETT-EEEEEEES-CCHHHHHHHHHHT
T ss_pred cCC-cEEEEEcC-CCHHHHHHHHHHh
Confidence 754 33334577 6888899998754
No 299
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.02 E-value=0.0008 Score=57.76 Aligned_cols=82 Identities=13% Similarity=0.142 Sum_probs=57.9
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.++.| .+.| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ ++....+.|..+.
T Consensus 17 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 93 (105)
T 1nsw_A 17 DGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDE--NPETTSQFGIMSIPTLILFKG-GRPVKQLIGYQPK 93 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcC--CHHHHHHcCCccccEEEEEeC-CeEEEEEecCCCH
Confidence 34555555 4322 224566677888887778888887543 468999999999999999964 3333346888888
Q ss_pred hHHHHHHHH
Q 005374 354 SRLSEVMEQ 362 (699)
Q Consensus 354 ~~L~~fi~~ 362 (699)
+.|.++++.
T Consensus 94 ~~l~~~l~~ 102 (105)
T 1nsw_A 94 EQLEAQLAD 102 (105)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHH
Confidence 889888764
No 300
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=96.98 E-value=0.0016 Score=56.04 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=59.0
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.++.| .+.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 95 (107)
T 1dby_A 19 SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE--SPNVASEYGIRSIPTIMVFKG-GKKCETIIGAVPK 95 (107)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHHTCCSSCEEEEESS-SSEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCC--CHHHHHHCCCCcCCEEEEEeC-CEEEEEEeCCCCH
Confidence 44555555 4322 224566777888887778888886533 468999999999999999964 3333346888888
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.+++++.
T Consensus 96 ~~l~~~l~~~ 105 (107)
T 1dby_A 96 ATIVQTVEKY 105 (107)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8999998753
No 301
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=96.98 E-value=0.0011 Score=63.28 Aligned_cols=41 Identities=20% Similarity=0.275 Sum_probs=34.7
Q ss_pred CCCcEEEEEeccC-CCCCCCcchHHHHHHHHhhcccceeeeecc
Q 005374 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (699)
Q Consensus 152 ~~~~~lV~FYapw-C~hCk~l~p~~~~~A~~L~g~~~va~Vdc~ 194 (699)
.+++++|.||+.| |+.|....|.+.++.++ .+ +.|..|+.+
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~-v~vv~Is~D 84 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-SG-ATVLCVSKD 84 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TT-CEEEEEESS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cC-CEEEEEECC
Confidence 4679999999999 99999999999999988 33 567777776
No 302
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.95 E-value=0.0031 Score=62.92 Aligned_cols=42 Identities=10% Similarity=-0.158 Sum_probs=36.2
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeecc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~ 194 (699)
.++++||.|+|.||+.|. -.|.++++.+++++. +.|..|+|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 468999999999999998 789999999999765 377788875
No 303
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=96.94 E-value=0.00059 Score=63.83 Aligned_cols=42 Identities=10% Similarity=0.005 Sum_probs=34.3
Q ss_pred CcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcccceeeeeccc
Q 005374 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD 195 (699)
Q Consensus 154 ~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~ 195 (699)
++++|.|| +.||+.|....|.+.++.++++....|..|.++.
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~ 78 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADS 78 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCC
Confidence 36788887 9999999999999999999987543667777663
No 304
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.92 E-value=0.0052 Score=52.23 Aligned_cols=96 Identities=18% Similarity=0.252 Sum_probs=62.3
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.+++.+... .+++.++.| ++.| ....+.+..++..+. .+.|+.+.... ...++++|+|.+.|++++|
T Consensus 4 i~~~~~~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 79 (104)
T 2vim_A 4 LATAADLEKLINEN-KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQ--NEEAAAKYSVTAMPTFVFI 79 (104)
T ss_dssp CCSHHHHHHHHHTT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhc-CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccC--CHHHHHHcCCccccEEEEE
Confidence 44433356656532 244555544 4332 223466666777775 68888887543 4689999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++ .....+.| .+.+.|.+||++.
T Consensus 80 ~~g-~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 80 KDG-KEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred eCC-cEEEEEeC-CCHHHHHHHHHhh
Confidence 853 33333577 6888899998764
No 305
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.92 E-value=0.0016 Score=58.07 Aligned_cols=97 Identities=24% Similarity=0.210 Sum_probs=63.9
Q ss_pred eecccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCC-ceEEEEEccccccHhHHhhcCCCCCCEE
Q 005374 260 FYYTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPAI 334 (699)
Q Consensus 260 ~~it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~-~~Fg~V~~~~~~s~~l~~kf~V~~~PtI 334 (699)
..+++.+.+++.+. .+++.+++| .+.| ....+.+..++..+.+. +.|..|.... ..+++++|+|.+.|++
T Consensus 18 ~~i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~--~~~~~~~~~v~~~Pt~ 92 (121)
T 2j23_A 18 QVISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE--QSQIAQEVGIRAMPTF 92 (121)
T ss_dssp EECCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT--CHHHHHHHTCCSSSEE
T ss_pred EEcCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC--CHHHHHHcCCCcccEE
Confidence 34666554666663 244555544 4433 22456666677777654 7888886433 4689999999999999
Q ss_pred EEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 335 vlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
++|++ ++....+.|. +.+.|.+||+..
T Consensus 93 ~~~~~-G~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 93 VFFKN-GQKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EEEET-TEEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEC-CeEEeeEcCC-CHHHHHHHHHHh
Confidence 99974 3333346776 888999998764
No 306
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=96.91 E-value=0.0016 Score=58.16 Aligned_cols=89 Identities=16% Similarity=0.208 Sum_probs=63.4
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.++.| ...| ....+.+..++..+.+.+.|..|.........++++|+|.+.|++++|..+++....+.|..+.
T Consensus 26 ~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~ 105 (126)
T 2l57_A 26 GIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRK 105 (126)
T ss_dssp SSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCH
T ss_pred CCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCH
Confidence 44555555 3322 2245666778888877888888862122346899999999999999998656544456888899
Q ss_pred hHHHHHHHHhhcc
Q 005374 354 SRLSEVMEQNKLQ 366 (699)
Q Consensus 354 ~~L~~fi~~~~~~ 366 (699)
+.|.++|+...-+
T Consensus 106 ~~l~~~l~~~~~~ 118 (126)
T 2l57_A 106 NNIETILNSLGVK 118 (126)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhcc
Confidence 9999999887544
No 307
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.90 E-value=0.00085 Score=61.56 Aligned_cols=84 Identities=17% Similarity=0.218 Sum_probs=61.7
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+|.| ...| ....+.+..++..+.+.+.|+.|.... ...++++|+|.++||+++|+++ .....+.|..+.
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~ 100 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIAT--NPWTAEKYGVQGTPTFKFFCHG-RPVWEQVGQIYP 100 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT--CHHHHHHHTCCEESEEEEEETT-EEEEEEESSCCH
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCc--CHhHHHHCCCCcCCEEEEEeCC-cEEEEEcCCCCH
Confidence 44555544 4322 234577777888888889999987543 4789999999999999999754 333357888889
Q ss_pred hHHHHHHHHhh
Q 005374 354 SRLSEVMEQNK 364 (699)
Q Consensus 354 ~~L~~fi~~~~ 364 (699)
+.|.+||+...
T Consensus 101 ~~l~~~l~~~l 111 (140)
T 3hz4_A 101 SILKNAVRDML 111 (140)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988653
No 308
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.90 E-value=0.0025 Score=54.99 Aligned_cols=96 Identities=19% Similarity=0.204 Sum_probs=62.3
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.+++.+... .+++.++.| .+.| ....+.+..++..+ +.+.|+.|.... ..+++++|+|.+.||+++|
T Consensus 6 i~~~~~~~~~~~~~-~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 6 VGSDPDFQPELSGA-GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQ--CQGTAATNNISATPTFQFF 81 (107)
T ss_dssp ECSGGGHHHHHHHT-TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEE
T ss_pred ecCHHHHHHHHHhC-CCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECcc--CHHHHHhcCCCcccEEEEE
Confidence 44444466666432 244555555 4322 23456777788877 468888887543 4789999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++. ....+.| .....|.+||+.+
T Consensus 82 ~~G~-~~~~~~G-~~~~~l~~~l~~~ 105 (107)
T 1gh2_A 82 RNKV-RIDQYQG-ADAVGLEEKIKQH 105 (107)
T ss_dssp ETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred ECCe-EEEEEeC-CCHHHHHHHHHHh
Confidence 7543 2233567 4455699888764
No 309
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.90 E-value=0.0012 Score=59.74 Aligned_cols=83 Identities=14% Similarity=0.289 Sum_probs=60.4
Q ss_pred CcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.++.| ... |....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|++ ++....+.|..+.
T Consensus 40 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 116 (128)
T 2o8v_B 40 DGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSK 116 (128)
T ss_dssp SSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT--CCTTSGGGTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEeC-CEEEEEEcCCCCH
Confidence 45666655 332 2335677778888888778888887543 457999999999999999964 4333346888888
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.+||++.
T Consensus 117 ~~l~~~l~~~ 126 (128)
T 2o8v_B 117 GQLKEFLDAN 126 (128)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 310
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.88 E-value=0.0015 Score=56.75 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=64.3
Q ss_pred cccchhhhhhhhhcC-CCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEE
Q 005374 262 YTKESMGKNFLAKTG-PHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (699)
Q Consensus 262 it~~~~~~~Fl~~~~-~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvl 336 (699)
+++.+.+++.+.... .+++.++.| .+.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++
T Consensus 7 i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~ 84 (112)
T 1ep7_A 7 IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA--VAAVAEAAGITAMPTFHV 84 (112)
T ss_dssp ECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--THHHHHHHTCCBSSEEEE
T ss_pred ecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCc--hHHHHHHcCCCcccEEEE
Confidence 444334666665311 133445544 4332 224566777888887778898887533 468999999999999999
Q ss_pred EcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 337 fk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
|+++ +....+.|. +.+.|.+||+..
T Consensus 85 ~~~G-~~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 85 YKDG-VKADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp EETT-EEEEEEESC-CHHHHHHHHHHH
T ss_pred EECC-eEEEEEcCC-CHHHHHHHHHHH
Confidence 9753 333346776 888899998764
No 311
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=96.88 E-value=0.0021 Score=54.91 Aligned_cols=83 Identities=14% Similarity=0.245 Sum_probs=58.7
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+++| ...| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++++++ .....+.|..+.
T Consensus 18 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~G~~~~ 94 (105)
T 1fb6_A 18 EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDE--APGIATQYNIRSIPTVLFFKNG-ERKESIIGAVPK 94 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEEECCCH
T ss_pred CCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcc--hHHHHHhCCCCcccEEEEEeCC-eEEEEEecCCCH
Confidence 44555555 4322 224566677888887778888886543 4689999999999999999753 333346788888
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.++|++.
T Consensus 95 ~~l~~~l~~~ 104 (105)
T 1fb6_A 95 STLTDSIEKY 104 (105)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 8999998753
No 312
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.87 E-value=0.0017 Score=57.40 Aligned_cols=93 Identities=19% Similarity=0.150 Sum_probs=63.1
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.++..+.. +++.++.| .+. |....+.+..++..+.+ +.|+.|.... ...++++|+|.+.|++++|
T Consensus 17 ~~~~~~~~~~~~~---~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 90 (114)
T 2oe3_A 17 LTNLTEFRNLIKQ---NDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDE--SPDIAKECEVTAMPTFVLG 90 (114)
T ss_dssp CCSHHHHHHHHHH---CSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSBSEEEEE
T ss_pred cCCHHHHHHHHhC---CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC--CHHHHHHCCCCcccEEEEE
Confidence 5555556666653 34656655 332 23356777778888766 8888886543 4679999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHH
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
+++ +....+.|.. .+.|.++|++
T Consensus 91 ~~G-~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 91 KDG-QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp ETT-EEEEEEESSC-HHHHHHHHHT
T ss_pred eCC-eEEEEEeCCC-HHHHHHHHHh
Confidence 754 3223367776 8889988864
No 313
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=96.87 E-value=0.00057 Score=64.30 Aligned_cols=55 Identities=16% Similarity=0.082 Sum_probs=43.2
Q ss_pred CCCcEEEEEeccC-CCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FYapw-C~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.||+.| |++|....|.+.++++++ ..+.|..|+++........+++++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~ 98 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANG 98 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSS
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcC
Confidence 4679999999999 999999999999999999 546788888874333333455554
No 314
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.84 E-value=0.0024 Score=55.75 Aligned_cols=90 Identities=20% Similarity=0.258 Sum_probs=60.9
Q ss_pred hhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCC
Q 005374 266 SMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPG 341 (699)
Q Consensus 266 ~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~ 341 (699)
+.+++.+.. +++.+++| ...| ....+.+..++..+. .+.|..|.... ...++++|+|.+.|++++|+++
T Consensus 17 ~~f~~~~~~---~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G- 89 (112)
T 1syr_A 17 AEFDSIISQ---NELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDE--VSEVTEKENITSMPTFKVYKNG- 89 (112)
T ss_dssp HHHHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--THHHHHHTTCCSSSEEEEEETT-
T ss_pred HHHHHHHcc---CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCC--CHHHHHHcCCCcccEEEEEECC-
Confidence 336666653 44666655 3322 224566666777775 48888886543 4679999999999999999853
Q ss_pred CCceeecCCCChhHHHHHHHHh
Q 005374 342 VKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 342 ~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
.....+.|. +.+.|.+||+..
T Consensus 90 ~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 90 SSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEEEEEESC-CHHHHHHHHHTT
T ss_pred cEEEEEeCC-CHHHHHHHHHHh
Confidence 333346787 888999998754
No 315
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.83 E-value=0.0016 Score=61.15 Aligned_cols=83 Identities=11% Similarity=0.097 Sum_probs=61.1
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+|.| .+.+ ....+.+..++..|.+.+.|+.|.... ...++++|+|.+.|++++|++ ++....+.|..+.
T Consensus 64 ~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~~~~~~-G~~~~~~~G~~~~ 140 (155)
T 2ppt_A 64 DLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA--HPAVAGRHRIQGIPAFILFHK-GRELARAAGARPA 140 (155)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--STHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc--cHHHHHHcCCCcCCEEEEEeC-CeEEEEecCCCCH
Confidence 34555544 4322 235677778888888789999987543 467999999999999999975 3333346888899
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.+||++.
T Consensus 141 ~~l~~~l~~~ 150 (155)
T 2ppt_A 141 SELVGFVRGK 150 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 316
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.82 E-value=0.0013 Score=58.01 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=59.1
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.++.| ...| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|++ ++....+.|..+.
T Consensus 30 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~~-g~~~~~~~G~~~~ 106 (121)
T 2i1u_A 30 NKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT--NPETARNFQVVSIPTLILFKD-GQPVKRIVGAKGK 106 (121)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhcCCCcCCEEEEEEC-CEEEEEecCCCCH
Confidence 44555555 4322 234566777888887788898887543 478999999999999999974 3333346888888
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.+||+..
T Consensus 107 ~~l~~~l~~~ 116 (121)
T 2i1u_A 107 AALLRELSDV 116 (121)
T ss_dssp HHHHHHTCSC
T ss_pred HHHHHHHHHH
Confidence 8899887643
No 317
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=96.81 E-value=0.0018 Score=56.29 Aligned_cols=83 Identities=13% Similarity=0.095 Sum_probs=59.2
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.++.| .+.| ....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|+++ +....+.|..+.
T Consensus 23 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~ 99 (112)
T 1t00_A 23 DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDE--NPGTAAKYGVMSIPTLNVYQGG-EVAKTIVGAKPK 99 (112)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCH
T ss_pred CCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCC--CHHHHHhCCCCcccEEEEEeCC-EEEEEEeCCCCH
Confidence 44555555 4322 224566777888887788888887543 4789999999999999999754 333346888888
Q ss_pred hHHHHHHHHh
Q 005374 354 SRLSEVMEQN 363 (699)
Q Consensus 354 ~~L~~fi~~~ 363 (699)
+.|.++|+..
T Consensus 100 ~~l~~~l~~~ 109 (112)
T 1t00_A 100 AAIVRDLEDF 109 (112)
T ss_dssp HHHHHHTHHH
T ss_pred HHHHHHHHHH
Confidence 8999988754
No 318
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=96.81 E-value=0.0012 Score=62.80 Aligned_cols=100 Identities=8% Similarity=0.100 Sum_probs=69.3
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEc-C---CCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFFS-K---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~-~---~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.+++.+.. ..+++.|+-|. + .|....|.+..+|.+|.+++.|+.|.+.+ .++++.+|+|.+.||+++|
T Consensus 26 l~t~~~f~~~v~~-~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe--~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 26 LNSGWAVDQAIVN-EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE--VPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CCSHHHHHHHHHH-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTTTTCCSSEEEEEE
T ss_pred cCCHHHHHHHHHh-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCCCCCCEEEEE
Confidence 4444445555532 23456666553 2 23346788899999998889999998643 5789999999999999999
Q ss_pred cCCCCCce--------eecCCCC-hhHHHHHHHHhh
Q 005374 338 KDPGVKPV--------VYYGSFN-NSRLSEVMEQNK 364 (699)
Q Consensus 338 k~~~~~pv--------~y~g~~~-~~~L~~fi~~~~ 364 (699)
+++....+ ...|..+ .+.|.++|+.+.
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 97643211 2456666 788999987663
No 319
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=96.80 E-value=0.0011 Score=66.48 Aligned_cols=98 Identities=8% Similarity=0.006 Sum_probs=64.7
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhC-------CC------------Cc
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~-------~i------------~~ 210 (699)
.++++||.|| +.||+.|....|.+.++.++++.. +.|..|+++........++++ ++ .+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 4578999999 999999999999999999998643 367777776433333344433 11 12
Q ss_pred cccc-----ccccEEEEcCCCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 211 IFFR-----RGLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 211 ~f~V-----~gyPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
.|.| ...|+.+++-..... ...+.| .++.+.|++.+...
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I---~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCV---RHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBE---EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 3445 367998888543332 122223 46788888888765
No 320
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.79 E-value=0.0041 Score=54.00 Aligned_cols=98 Identities=14% Similarity=0.168 Sum_probs=61.5
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhc-cCCceEEEEEccccccHhHHhhcCCCCCCEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNY-WAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~-~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvl 336 (699)
+++.+.+++.+.....+++.++.| .+.| ....+.+..++..+ ...+.|+.|.... ...++++|+|.+.|++++
T Consensus 5 i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~ 82 (112)
T 3d6i_A 5 INDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE--NSEISELFEISAVPYFII 82 (112)
T ss_dssp ECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT--CHHHHHHTTCCSSSEEEE
T ss_pred cCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc--CHHHHHHcCCCcccEEEE
Confidence 454333666665312245555555 4332 23456677777774 2458888887543 478999999999999999
Q ss_pred EcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 337 fk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
|+++ +....+.|. ....|.++|+..
T Consensus 83 ~~~G-~~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 83 IHKG-TILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp EETT-EEEEEECSC-CHHHHHHHHHHH
T ss_pred EECC-EEEEEecCC-CHHHHHHHHHHH
Confidence 9753 322335665 455688888764
No 321
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.74 E-value=0.0028 Score=55.34 Aligned_cols=88 Identities=20% Similarity=0.264 Sum_probs=59.5
Q ss_pred hhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCC
Q 005374 268 GKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (699)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~ 343 (699)
++..+. .+++.+|.| .+.| ....+.+..++..+.+ +.|..|.... ...++++|+|.+.|++++|++ ++.
T Consensus 17 f~~~~~---~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~ 89 (109)
T 3f3q_A 17 FDSAIA---QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDE--LGDVAQKNEVSAMPTLLLFKN-GKE 89 (109)
T ss_dssp HHHHTT---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSSEEEEEET-TEE
T ss_pred HHHHHh---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCC--CHHHHHHcCCCccCEEEEEEC-CEE
Confidence 455443 245656655 3322 2345677778877754 7888886533 478999999999999999984 433
Q ss_pred ceeecCCCChhHHHHHHHHh
Q 005374 344 PVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 344 pv~y~g~~~~~~L~~fi~~~ 363 (699)
...+.|. +.+.|.++|+++
T Consensus 90 ~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 90 VAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEeCC-CHHHHHHHHHhh
Confidence 3345676 678899998764
No 322
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.73 E-value=0.0018 Score=59.00 Aligned_cols=96 Identities=10% Similarity=0.095 Sum_probs=63.9
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-c---CCCCCchHHHHHHHHhccC-CceEEEEEccccccHhHHhhcCCC------C
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-S---KTGERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVE------S 330 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~---~~~~~~~~~~~~~A~~~~~-~~~Fg~V~~~~~~s~~l~~kf~V~------~ 330 (699)
++.++ ++..+.... .++.++.| . ..|....|.+..++.+|.+ .+.|+.|... +..+++++|+|. +
T Consensus 12 l~~~~-f~~~~~~~~-~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~~~~~~ 87 (137)
T 2dj0_A 12 FNDKT-IDEELERDK-RVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG--RYTDVSTRYKVSTSPLTKQ 87 (137)
T ss_dssp CCTTH-HHHHHHHST-TSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT--TCHHHHHHTTCCCCSSSSC
T ss_pred ccHhh-HHHHHhcCC-CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc--cCHHHHHHccCcccCCcCC
Confidence 45444 566665433 44445555 3 3455678889889988875 7888877543 357899999998 9
Q ss_pred CCEEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 331 APAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 331 ~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
.||+++|+++ +....+.|..+.+.|.+|+..
T Consensus 88 ~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 88 LPTLILFQGG-KEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SSEEEEESSS-SEEEEESCBCSSSCBCCCCCC
T ss_pred CCEEEEEECC-EEEEEecCcCchHHHHHHHhc
Confidence 9999999753 333346777776666555543
No 323
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.69 E-value=0.0056 Score=50.11 Aligned_cols=77 Identities=18% Similarity=0.265 Sum_probs=57.3
Q ss_pred EEEEEE-c---CCCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhH
Q 005374 280 VKVIFF-S---KTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (699)
Q Consensus 280 v~vl~f-~---~~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~ 355 (699)
+.+++| . ..|....+.+..++.++.+.+.|..+.... ..+++++|+|.+.|++++ + ++. .+.|..+.+.
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~-G~~--~~~G~~~~~~ 76 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVME--NPQKAMEYGIMAVPTIVI--N-GDV--EFIGAPTKEA 76 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSS--SCCTTTSTTTCCSSEEEE--T-TEE--ECCSSSSSHH
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCC--CHHHHHHCCCcccCEEEE--C-CEE--eeecCCCHHH
Confidence 445555 3 244556788888888888788888887543 357899999999999998 3 322 5788788899
Q ss_pred HHHHHHHh
Q 005374 356 LSEVMEQN 363 (699)
Q Consensus 356 L~~fi~~~ 363 (699)
|.+++++.
T Consensus 77 l~~~l~~~ 84 (85)
T 1fo5_A 77 LVEAIKKR 84 (85)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998764
No 324
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.66 E-value=0.00038 Score=62.03 Aligned_cols=60 Identities=7% Similarity=0.084 Sum_probs=41.8
Q ss_pred EEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchh----hhhHHHHhCCCCcccccccccEEEEcCCC
Q 005374 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (699)
Q Consensus 156 ~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~----~~~~L~~k~~i~~~f~V~gyPTl~~f~~g 226 (699)
.++.|++|||++|+++.+.+++.+... ..+..||+++++ ....|++.++ ++++|++++ +|
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~---~~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP~v~i--~g 83 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR---GAYEIVDIKEFKPENELRDYFEQITG------GKTVPRIFF--GK 83 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT---TSEEEEEGGGSSSHHHHHHHHHHHHS------CCSSCEEEE--TT
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc---CceEEEEccCCCChHHHHHHHHHHhC------CCCcCEEEE--CC
Confidence 477899999999998887766543110 118889988653 2234788887 669999754 55
No 325
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.66 E-value=0.0044 Score=56.48 Aligned_cols=82 Identities=18% Similarity=0.200 Sum_probs=58.9
Q ss_pred cEEEEEEcCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhH
Q 005374 279 KVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (699)
Q Consensus 279 ~v~vl~f~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~ 355 (699)
++.|.|+.+.+ ....+.+..++..|.+.+.|+.|.... ...++++|+|.++|++++|+++ .....+.|..+.+.
T Consensus 52 ~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~ 128 (140)
T 1v98_A 52 LTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDE--HPGLAARYGVRSVPTLVLFRRG-APVATWVGASPRRV 128 (140)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCC--CHHHHHHCCCCccCEEEEEeCC-cEEEEEeCCCCHHH
Confidence 34444554432 224567777888887778888887543 4689999999999999999753 33334688888899
Q ss_pred HHHHHHHh
Q 005374 356 LSEVMEQN 363 (699)
Q Consensus 356 L~~fi~~~ 363 (699)
|.+||+..
T Consensus 129 l~~~i~~~ 136 (140)
T 1v98_A 129 LEERLRPY 136 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999764
No 326
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.64 E-value=0.004 Score=54.41 Aligned_cols=83 Identities=16% Similarity=0.243 Sum_probs=57.8
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.++.| .+.| ....+.+..++..+. .+.|..|.... ..+++++|+|.+.|++++|++ ++....+.|..+.
T Consensus 19 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~v~~~~G~~~~ 94 (110)
T 2l6c_A 19 LSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEA--RPELMKELGFERVPTLVFIRD-GKVAKVFSGIMNP 94 (110)
T ss_dssp CSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGG--CHHHHHHTTCCSSCEEEEEES-SSEEEEEESCCCH
T ss_pred CCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcC--CHHHHHHcCCcccCEEEEEEC-CEEEEEEcCCCCH
Confidence 34555555 3322 234566666777664 67888886533 478999999999999999965 4333346788899
Q ss_pred hHHHHHHHHhh
Q 005374 354 SRLSEVMEQNK 364 (699)
Q Consensus 354 ~~L~~fi~~~~ 364 (699)
+.|.+++..+.
T Consensus 95 ~~l~~~~~~~~ 105 (110)
T 2l6c_A 95 RELQALYASIH 105 (110)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 327
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.63 E-value=0.00082 Score=61.53 Aligned_cols=65 Identities=15% Similarity=0.243 Sum_probs=43.3
Q ss_pred CcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccch---hh-hhHHHHhCCCCcccccccccEEE
Q 005374 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSLV 221 (699)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~---~~-~~~L~~k~~i~~~f~V~gyPTl~ 221 (699)
|...+..+. ++.|+++||++|+++.+.++++. +.+..||++.+ +. ...|++.++ +.++|+|+
T Consensus 20 ~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g------~~~vP~l~ 85 (130)
T 2cq9_A 20 IQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRIF 85 (130)
T ss_dssp HHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHS------SCCSSEEE
T ss_pred HHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhC------CCCcCEEE
Confidence 444444443 34499999999999998888753 35667777744 21 123777777 66999984
Q ss_pred EcCCC
Q 005374 222 AFPPG 226 (699)
Q Consensus 222 ~f~~g 226 (699)
+ +|
T Consensus 86 i--~G 88 (130)
T 2cq9_A 86 V--NG 88 (130)
T ss_dssp E--TT
T ss_pred E--CC
Confidence 3 55
No 328
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=96.62 E-value=0.0018 Score=60.89 Aligned_cols=56 Identities=9% Similarity=0.090 Sum_probs=35.8
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhccc-ceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~-~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.|| +.||+.|..-.|.+.++.++++... .+..|+.+........+++++
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~ 86 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNK 86 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcC
Confidence 4678899998 9999999999999998888887654 666777764434344555544
No 329
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.62 E-value=0.0029 Score=55.96 Aligned_cols=91 Identities=19% Similarity=0.203 Sum_probs=60.9
Q ss_pred hhhhhhhc-CCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCC
Q 005374 268 GKNFLAKT-GPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (699)
Q Consensus 268 ~~~Fl~~~-~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~ 342 (699)
++..+... ..+++.++.| .+.| ....+.+..++..|.+ +.|..|.... ...++++|+|.+.|++++|+++ +
T Consensus 23 ~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G-~ 98 (122)
T 2vlu_A 23 WTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDE--LKPIAEQFSVEAMPTFLFMKEG-D 98 (122)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-E
T ss_pred HHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCC--CHHHHHHcCCCcccEEEEEeCC-E
Confidence 55555431 1244555555 4322 2245667778887766 8888886543 4789999999999999999754 3
Q ss_pred CceeecCCCChhHHHHHHHHh
Q 005374 343 KPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 343 ~pv~y~g~~~~~~L~~fi~~~ 363 (699)
....+.|.. .+.|.+||+..
T Consensus 99 ~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 99 VKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp EEEEEESSC-HHHHHHHHHHH
T ss_pred EEEEEeCcC-HHHHHHHHHHH
Confidence 333467877 88899998765
No 330
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.59 E-value=0.0081 Score=59.38 Aligned_cols=42 Identities=10% Similarity=-0.189 Sum_probs=35.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeecc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~ 194 (699)
.++++||.|+|.||+.| .-.|.+.++.+++++. +.|..|+|+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 46899999999999999 6788999999999765 377778775
No 331
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.58 E-value=0.0041 Score=56.08 Aligned_cols=94 Identities=14% Similarity=0.074 Sum_probs=63.3
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.++..+. .+++.+|.| .+. |....+.+..++..+. .+.|+.|.... ..+++++|+|.+.||+++|
T Consensus 24 l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~i~ 97 (125)
T 1r26_A 24 VYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADN--NSEIVSKCRVLQLPTFIIA 97 (125)
T ss_dssp ECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred CCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCC--CHHHHHHcCCCcccEEEEE
Confidence 555344666663 234555544 432 2335677777888774 68888887543 4789999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++ .....+.| .+.+.|.++|+..
T Consensus 98 ~~G-~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 98 RSG-KMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred eCC-eEEEEEeC-CCHHHHHHHHHHH
Confidence 754 33233577 6788899988764
No 332
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.56 E-value=0.0043 Score=54.64 Aligned_cols=82 Identities=21% Similarity=0.170 Sum_probs=58.8
Q ss_pred CcEEEEEE-cCC---CCCchHHHHHHHHhccC-----CceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCC-ceee
Q 005374 278 HKVKVIFF-SKT---GERASPFVRQISRNYWA-----YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK-PVVY 347 (699)
Q Consensus 278 ~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~-----~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~-pv~y 347 (699)
+++.+|.| .+. |....+.+..++..+.+ .+.|+.|..... .+++ +|.++||+++|++++.. ...+
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~--~v~~~Pt~~~~~~~~~~~~~~~ 99 (121)
T 2djj_A 25 TKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN---DVPD--EIQGFPTIKLYPAGAKGQPVTY 99 (121)
T ss_dssp TSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS---CCSS--CCSSSSEEEEECSSCTTSCCCC
T ss_pred CCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc---cccc--ccCcCCeEEEEeCcCCCCceEe
Confidence 34545544 432 33356777888888876 788988875432 2555 99999999999886552 5567
Q ss_pred cCCCChhHHHHHHHHhh
Q 005374 348 YGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 348 ~g~~~~~~L~~fi~~~~ 364 (699)
.|..+.+.|.+||+++.
T Consensus 100 ~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 100 SGSRTVEDLIKFIAENG 116 (121)
T ss_dssp CCCSCHHHHHHHHHHTS
T ss_pred cCCCCHHHHHHHHHhcc
Confidence 89889999999998763
No 333
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.55 E-value=0.0031 Score=56.66 Aligned_cols=86 Identities=19% Similarity=0.252 Sum_probs=59.8
Q ss_pred CcEEEEEEc-CC---CCCchHHHHHHHHhcc--CCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCC-Cceeec-C
Q 005374 278 HKVKVIFFS-KT---GERASPFVRQISRNYW--AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV-KPVVYY-G 349 (699)
Q Consensus 278 ~~v~vl~f~-~~---~~~~~~~~~~~A~~~~--~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~-~pv~y~-g 349 (699)
+++.+|.|. .. |....+.+..++..+. ..+.|+.|.... ...++++|+|.++||+++|++++. .++.|. |
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg 102 (133)
T 2dj3_A 25 KKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA--NDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGG 102 (133)
T ss_dssp TSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT--SCCCCSSCCCSSSSEEEEECTTCTTSCEECCSS
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc--CHHHHhhcCCCcCCEEEEEeCCCcccceEecCC
Confidence 456666663 32 2234567777888876 457777765432 356788999999999999987654 334566 5
Q ss_pred CCChhHHHHHHHHhhc
Q 005374 350 SFNNSRLSEVMEQNKL 365 (699)
Q Consensus 350 ~~~~~~L~~fi~~~~~ 365 (699)
..+.+.|.+||+.+.-
T Consensus 103 ~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 103 NRDLEHLSKFIDEHAT 118 (133)
T ss_dssp CCSTTHHHHHHHHHSS
T ss_pred CcCHHHHHHHHHHhcc
Confidence 5889999999987643
No 334
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.54 E-value=0.0082 Score=49.10 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=53.9
Q ss_pred CCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 288 TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 288 ~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
.|....+.+..++.++.+.+.|..+.... ...++++|+|.+.|++++ + ++. .+.|..+.+.|.+++++.
T Consensus 15 ~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~-G~~--~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 15 YCPMAIEVVDEAKKEFGDKIDVEKIDIMV--DREKAIEYGLMAVPAIAI--N-GVV--RFVGAPSREELFEAINDE 83 (85)
T ss_dssp CSTTHHHHHHHHHHHHCSSCCEEEECTTT--CGGGGGGTCSSCSSEEEE--T-TTE--EEECSSCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhCCceeeCEEEE--C-CEE--EEccCCCHHHHHHHHHHH
Confidence 44556788888888888788898886543 467999999999999998 3 332 567878889999998764
No 335
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.53 E-value=0.0046 Score=54.32 Aligned_cols=95 Identities=15% Similarity=0.227 Sum_probs=62.0
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.++..+.... +++.++.| .+.| ....+.+..++..+ .+.|+.|.... ...++++|+|.+.|+++++
T Consensus 18 l~~~~~~~~~l~~~~-~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 92 (117)
T 2xc2_A 18 LKQDGDLESLLEQHK-NKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDK--LEETARKYNISAMPTFIAI 92 (117)
T ss_dssp CCSTTHHHHHHHHTT-TSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTT--SHHHHHHTTCCSSSEEEEE
T ss_pred eCCHHHHHHHHHhCC-CCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCc--cHHHHHHcCCCccceEEEE
Confidence 555344666665422 44555544 4322 22456666677766 67888886433 4779999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++ +....+.| .+.+.|.++|+++
T Consensus 93 ~~G-~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 93 KNG-EKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred eCC-cEEEEEeC-CCHHHHHHHHHHh
Confidence 754 33333567 6788899998754
No 336
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.51 E-value=0.006 Score=56.72 Aligned_cols=97 Identities=13% Similarity=0.199 Sum_probs=64.0
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.++..+.... +++.+|.| .+-| ....+.+..++..+ ..+.|+.|.... ...++++|+|.++|++++|
T Consensus 17 l~~~~~~~~~~~~~~-~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 92 (153)
T 2wz9_A 17 VGSAGQFEELLRLKA-KSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEG--VPEVSEKYEISSVPTFLFF 92 (153)
T ss_dssp ECSHHHHHHHHHHTT-TSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhcC-CCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCC--CHHHHHHcCCCCCCEEEEE
Confidence 554444666665432 34555544 4322 23456667777776 468888887543 4679999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
+ +++....+.| .+.+.|.+||+...
T Consensus 93 ~-~G~~~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 93 K-NSQKIDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp E-TTEEEEEEES-SCHHHHHHHHHHHS
T ss_pred E-CCEEEEEEeC-CCHHHHHHHHHHHh
Confidence 9 4433223466 57778999998764
No 337
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.46 E-value=0.0031 Score=59.91 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=30.0
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHh--hccc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL--EGIA 186 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L--~g~~ 186 (699)
+.++.+++|+.+||+||+++.|...++.+++ .+.+
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v 62 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKV 62 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSE
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcE
Confidence 4677899999999999999999999988887 5543
No 338
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=96.45 E-value=0.0032 Score=62.30 Aligned_cols=98 Identities=13% Similarity=0.023 Sum_probs=63.3
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhC-------CC------------Cc
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~-------~i------------~~ 210 (699)
.+++++|.|| +.||++|..-.|.+.++.++++.. +.|..|+++........++++ ++ .+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 3578999999 999999999999999999998653 367777776432222233322 11 11
Q ss_pred ccccc------cccEEEEcCCCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 211 ~f~V~------gyPTl~~f~~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
.|.|. ..|+.+++-..... ...+.| .++.+.|++.+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I---~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGIL---RQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEE---EEEEecCCCCCCCHHHHHHHHHHh
Confidence 23453 58998888543332 122223 35788888888764
No 339
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=96.43 E-value=0.0032 Score=60.35 Aligned_cols=54 Identities=9% Similarity=0.086 Sum_probs=39.9
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhccc-ceeeeeccchhhhhHHHHh
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAER 205 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~-~va~Vdc~~~~~~~~L~~k 205 (699)
.+++++|.|| +.||+.|..-.|.+.++.++++... .|..|.++........+++
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~ 105 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAK 105 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHH
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 3567778887 9999999999999999999997653 6777777743333334444
No 340
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.38 E-value=0.0013 Score=61.75 Aligned_cols=65 Identities=15% Similarity=0.241 Sum_probs=43.1
Q ss_pred CcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccch---hh-hhHHHHhCCCCcccccccccEEE
Q 005374 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSLV 221 (699)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~---~~-~~~L~~k~~i~~~f~V~gyPTl~ 221 (699)
|...+.+. . ++.|++|||++|+++.+.+++++ +.+..||++.+ +. ...|++.++ +.++|+|+
T Consensus 42 ~~~~i~~~-~-Vvvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g------~~tvP~if 107 (146)
T 2ht9_A 42 IQETISDN-C-VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRIF 107 (146)
T ss_dssp HHHHHHHC-S-EEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHS------CCCSCEEE
T ss_pred HHHHhcCC-C-EEEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhC------CCCcCeEE
Confidence 33344344 3 34499999999999998888763 35667777644 22 123777777 66999984
Q ss_pred EcCCC
Q 005374 222 AFPPG 226 (699)
Q Consensus 222 ~f~~g 226 (699)
+ +|
T Consensus 108 i--~G 110 (146)
T 2ht9_A 108 V--NG 110 (146)
T ss_dssp E--TT
T ss_pred E--CC
Confidence 3 55
No 341
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.33 E-value=0.0048 Score=61.27 Aligned_cols=84 Identities=14% Similarity=0.268 Sum_probs=62.4
Q ss_pred CcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+|.| .+- |....+.+..++..|.+.+.|+.|.... ...++++|+|.++||+++|++ +.....+.|..+.
T Consensus 30 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 106 (222)
T 3dxb_A 30 DGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSK 106 (222)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CTTTGGGGTCCSBSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCC--CHHHHHHcCCCcCCEEEEEEC-CeEEEEeccccCh
Confidence 44555544 432 2335677788888898888998887543 467999999999999999985 3333357888899
Q ss_pred hHHHHHHHHhh
Q 005374 354 SRLSEVMEQNK 364 (699)
Q Consensus 354 ~~L~~fi~~~~ 364 (699)
+.|.+||+...
T Consensus 107 ~~l~~~l~~~l 117 (222)
T 3dxb_A 107 GQLKEFLDANL 117 (222)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhhc
Confidence 99999998764
No 342
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.32 E-value=0.0066 Score=54.39 Aligned_cols=97 Identities=15% Similarity=0.167 Sum_probs=61.9
Q ss_pred cccchhhhhhhhhc-CCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEE
Q 005374 262 YTKESMGKNFLAKT-GPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (699)
Q Consensus 262 it~~~~~~~Fl~~~-~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvl 336 (699)
+++.+.++..+... ..+++.++.| ...| ....+.+..++..+. .+.|..|... +...++++|+|.+.|++++
T Consensus 21 l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d--~~~~l~~~~~v~~~Pt~~~ 97 (124)
T 1xfl_A 21 CHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTD--ELKSVASDWAIQAMPTFMF 97 (124)
T ss_dssp ESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TSHHHHHHTTCCSSSEEEE
T ss_pred eCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECc--cCHHHHHHcCCCccCEEEE
Confidence 44434455555532 1245666655 3322 234566777777775 5777777643 2478999999999999999
Q ss_pred EcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 337 fk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
|+++. ....+.| .+.+.|.++|+..
T Consensus 98 ~~~G~-~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 98 LKEGK-ILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp EETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred EECCE-EEEEEeC-CCHHHHHHHHHHh
Confidence 97543 2223567 5888899988764
No 343
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.29 E-value=0.0014 Score=57.41 Aligned_cols=65 Identities=8% Similarity=0.054 Sum_probs=43.7
Q ss_pred CcccccCCCcEEEEEec-----cCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhh-HHHHhCCCCcccccccccE
Q 005374 146 FPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERKPIGQIFFRRGLPS 219 (699)
Q Consensus 146 F~~~v~~~~~~lV~FYa-----pwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~-~L~~k~~i~~~f~V~gyPT 219 (699)
++..+..+. ++.|++ |||++|+++.+.+++.. +.+..+|.++++... .|++.++ +.++|+
T Consensus 10 ~~~~i~~~~--vvvf~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g------~~~vP~ 75 (105)
T 2yan_A 10 LKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSN------WPTYPQ 75 (105)
T ss_dssp HHHHHTSSS--EEEEESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHT------CCSSCE
T ss_pred HHHHhccCC--EEEEEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHC------CCCCCe
Confidence 444454443 344777 99999999888877653 468888988654322 2556666 669999
Q ss_pred EEEcCCC
Q 005374 220 LVAFPPG 226 (699)
Q Consensus 220 l~~f~~g 226 (699)
|+ .+|
T Consensus 76 v~--i~g 80 (105)
T 2yan_A 76 LY--VKG 80 (105)
T ss_dssp EE--ETT
T ss_pred EE--ECC
Confidence 84 455
No 344
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.28 E-value=0.0038 Score=60.12 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=29.6
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhccc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA 186 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~ 186 (699)
..++.+++|+++||++|..+.|.+.++.+.+.+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v 58 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDV 58 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCce
Confidence 45678999999999999999999999988765433
No 345
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.28 E-value=0.006 Score=52.77 Aligned_cols=97 Identities=20% Similarity=0.259 Sum_probs=61.8
Q ss_pred cccchhhhhhhhhc-CCCcEEEEEEc-CCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEE
Q 005374 262 YTKESMGKNFLAKT-GPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (699)
Q Consensus 262 it~~~~~~~Fl~~~-~~~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvl 336 (699)
+++.+.+++.+... ..+++.+++|. +.| ....+.+..++..+. .+.|..+... ....++++|+|.+.|++++
T Consensus 9 i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~ 85 (113)
T 1ti3_A 9 CHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVD--ELKAVAEEWNVEAMPTFIF 85 (113)
T ss_dssp ECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TCHHHHHHHHCSSTTEEEE
T ss_pred eccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcc--ccHHHHHhCCCCcccEEEE
Confidence 44434466666542 23556666553 322 223455666777765 5777777643 2478999999999999999
Q ss_pred EcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 337 fk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
|+++ +....+.| .+.+.|.++|+..
T Consensus 86 ~~~G-~~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 86 LKDG-KLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp EETT-EEEEEEEC-CCTTHHHHHHHHH
T ss_pred EeCC-EEEEEEec-CCHHHHHHHHHHh
Confidence 9753 22223466 6788899988764
No 346
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=96.27 E-value=0.0045 Score=59.75 Aligned_cols=98 Identities=9% Similarity=-0.043 Sum_probs=63.8
Q ss_pred CCCcEEEEEec-cCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhC----CCC------------cccc
Q 005374 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK----PIG------------QIFF 213 (699)
Q Consensus 152 ~~~~~lV~FYa-pwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~----~i~------------~~f~ 213 (699)
.+++++|.||+ .||+.|..-.|.+.++.++++.. +.|..|.++........++++ ++. +.|.
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 46789999995 99999999999999999988753 367777776433333344444 221 2234
Q ss_pred cc------cccEEEEcCCCCCCCCccccccCC----cCHHHHHHHHHHH
Q 005374 214 RR------GLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (699)
Q Consensus 214 V~------gyPTl~~f~~g~~~~~~~~~Y~G~----rs~~~Iv~fi~k~ 252 (699)
|. ..|+.+++-..... ...+.|. ++.+.|.+.+...
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i---~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGII---QAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 54 25998888543332 1233343 4688888888765
No 347
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.26 E-value=0.002 Score=54.58 Aligned_cols=73 Identities=5% Similarity=0.009 Sum_probs=47.8
Q ss_pred EEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeecc-----chh-hhhHHHHhCCCCcccccccccEEEEcCCCCCC
Q 005374 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-----DIR-LATHLAERKPIGQIFFRRGLPSLVAFPPGCKS 229 (699)
Q Consensus 156 ~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~-----~~~-~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~ 229 (699)
-++.|++|||++|+++.+.+++.. +.+-.+|.+ ++. ....+.+.++ +.++|+|++ +|.
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g------~~~vP~l~~--~g~-- 76 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISG------SYSVPVVVK--GDK-- 76 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHS------SSCSCEEEE--TTE--
T ss_pred eEEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcC------CCCcCEEEE--CCE--
Confidence 367789999999999887776653 234445554 111 1134667777 559999987 552
Q ss_pred CCccccccCCcCHHHHHHHHH
Q 005374 230 SDCMTRFEGELSVDAVTDWFA 250 (699)
Q Consensus 230 ~~~~~~Y~G~rs~~~Iv~fi~ 250 (699)
+-|..+.+.|.+++.
T Consensus 77 ------~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 77 ------HVLGYNEEKLKELIR 91 (92)
T ss_dssp ------EEESCCHHHHHHHHH
T ss_pred ------EEeCCCHHHHHHHhc
Confidence 134468888888864
No 348
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.23 E-value=0.00096 Score=60.04 Aligned_cols=68 Identities=12% Similarity=0.290 Sum_probs=44.6
Q ss_pred CcccccCCCcEEEEEeccCCCCCCCc-chHHHHHHHHhhcccceeeeeccchh----hhhHHHHhCCCCcccccccccEE
Q 005374 146 FPSIFHDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSL 220 (699)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~hCk~l-~p~~~~~A~~L~g~~~va~Vdc~~~~----~~~~L~~k~~i~~~f~V~gyPTl 220 (699)
+++.+.... ++.|++|||++|+++ .+.+++.+. ..+.+..||.++++ ....|++.++ +.++|+|
T Consensus 18 ~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g------~~tvP~v 86 (118)
T 3c1r_A 18 VKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEING------QRTVPNI 86 (118)
T ss_dssp HHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE
T ss_pred HHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhC------CCCcCEE
Confidence 344443333 566999999999987 766655431 22477888888543 2234777777 6699997
Q ss_pred EEcCCC
Q 005374 221 VAFPPG 226 (699)
Q Consensus 221 ~~f~~g 226 (699)
|.+|
T Consensus 87 --fi~g 90 (118)
T 3c1r_A 87 --YING 90 (118)
T ss_dssp --EETT
T ss_pred --EECC
Confidence 4466
No 349
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.19 E-value=0.0019 Score=53.05 Aligned_cols=71 Identities=11% Similarity=0.135 Sum_probs=46.5
Q ss_pred EEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhh-hhHHHHhCCCCcccccccccEEEEcCCCCCCCCcccc
Q 005374 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (699)
Q Consensus 157 lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~-~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~ 235 (699)
++.|+++||++|+++.+.+++. + +.+..+|+++++. ...+++.++ +.++|++.+ +|..
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~-i~~~~~~i~~~~~~~~~~~~~~~------~~~vP~l~~--~g~~------- 61 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-----G-VSFQELPIDGNAAKREEMIKRSG------RTTVPQIFI--DAQH------- 61 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----T-CCCEEEECTTCSHHHHHHHHHHS------SCCSCEEEE--TTEE-------
T ss_pred EEEEECCCChhHHHHHHHHHHC-----C-CCcEEEECCCCHHHHHHHHHHhC------CCCcCEEEE--CCEE-------
Confidence 5779999999999988777654 2 3577778775422 233666677 569999853 5521
Q ss_pred ccCCcCHHHHHHHHHH
Q 005374 236 FEGELSVDAVTDWFAT 251 (699)
Q Consensus 236 Y~G~rs~~~Iv~fi~k 251 (699)
..| .+.|.+++..
T Consensus 62 i~g---~~~i~~~~~~ 74 (82)
T 1fov_A 62 IGG---YDDLYALDAR 74 (82)
T ss_dssp EES---HHHHHHHHHT
T ss_pred EeC---HHHHHHHHHC
Confidence 122 3567776643
No 350
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.14 E-value=0.011 Score=55.14 Aligned_cols=110 Identities=13% Similarity=0.091 Sum_probs=75.5
Q ss_pred eEEEecCCCCcccccCCCcEEEEEec-cCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccc
Q 005374 137 AFNVVTSEDFPSIFHDSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (699)
Q Consensus 137 ~V~~Lt~~nF~~~v~~~~~~lV~FYa-pwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~ 215 (699)
-|.++|.+|+.....+.-+..+.++. +-...-..+.+.+.++|+.++|.+.++.||.++. ....+.+.+|+. -.
T Consensus 15 LV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~-~~~~~l~~fGl~----~~ 89 (147)
T 3bj5_A 15 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHT-DNQRILEFFGLK----KE 89 (147)
T ss_dssp CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCG-GGHHHHHHTTCC----GG
T ss_pred eeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchH-hHHHHHHHcCCC----cc
Confidence 47889999987766666555554343 3333344578899999999999999999998321 222377888854 22
Q ss_pred cccEEEEcCC-CCCCCCccccc-cCCcCHHHHHHHHHHHhc
Q 005374 216 GLPSLVAFPP-GCKSSDCMTRF-EGELSVDAVTDWFATAIL 254 (699)
Q Consensus 216 gyPTl~~f~~-g~~~~~~~~~Y-~G~rs~~~Iv~fi~k~v~ 254 (699)
..|++.++.. +... .+ .+ .|..+.+.|.+|+.+.+.
T Consensus 90 ~~P~v~i~~~~~~~~--Ky-~~~~~~~t~~~i~~Fv~d~l~ 127 (147)
T 3bj5_A 90 ECPAVRLITLEEEMT--KY-KPESEELTAERITEFCHRFLE 127 (147)
T ss_dssp GCSEEEEEECSSSCE--EE-CCSCCCCCHHHHHHHHHHHHT
T ss_pred cCCEEEEEecccccc--cC-CCCcccCCHHHHHHHHHHHHc
Confidence 4999999864 2111 11 22 388999999999998843
No 351
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.13 E-value=0.004 Score=58.63 Aligned_cols=55 Identities=13% Similarity=0.069 Sum_probs=40.7
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.|| +.||+.|..-.|.+.++.+++ ..+.|..|+++........+++++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~ 97 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEG 97 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcC
Confidence 3578899998 899999999999999999988 434777788774333333444444
No 352
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.13 E-value=0.029 Score=50.69 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=63.7
Q ss_pred CcceecccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHH---HHHHHhccCCceEEEEEccc--cccHhHHhhcC
Q 005374 257 PRIFYYTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFV---RQISRNYWAYASFAFVLWRE--EESSIWWNTFE 327 (699)
Q Consensus 257 P~~~~it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~---~~~A~~~~~~~~Fg~V~~~~--~~s~~l~~kf~ 327 (699)
|....+++.+.++..+.... +++.+|.| ..-| ....+.+ ..++..+. .+.|..|.... .....++++|+
T Consensus 11 ~~f~~~~~~~~~~~~l~~~~-~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~ 88 (134)
T 2fwh_A 11 LNFTQIKTVDELNQALVEAK-GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-DTVLLQANVTANDAQDVALLKHLN 88 (134)
T ss_dssp CCCEECCSHHHHHHHHHHHT-TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTT
T ss_pred CCcEEecCHHHHHHHHHHhc-CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcC
Confidence 44433444333455554332 34555544 4322 1122333 44566665 48888887643 22467999999
Q ss_pred CCCCCEEEEEcCCCCCc--eeecCCCChhHHHHHHHHh
Q 005374 328 VESAPAIVFLKDPGVKP--VVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 328 V~~~PtIvlfk~~~~~p--v~y~g~~~~~~L~~fi~~~ 363 (699)
|.+.|++++|..+++.. ..+.|..+.+.|.++++..
T Consensus 89 v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 89 VLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp CCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 99999999994444332 3478988999999998754
No 353
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=96.09 E-value=0.0046 Score=62.60 Aligned_cols=99 Identities=13% Similarity=0.036 Sum_probs=64.0
Q ss_pred CCCcEEEEEec-cCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhC-------C------------CCc
Q 005374 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------P------------IGQ 210 (699)
Q Consensus 152 ~~~~~lV~FYa-pwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~-------~------------i~~ 210 (699)
.+++++|.||+ .||+.|..-.|.+.+++++++.. +.|..|.++........++++ + +.+
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 46789999999 99999999999999999999754 367777777433322333322 1 112
Q ss_pred ccccc------cccEEEEcCCCCCCCCccccc---cCCcCHHHHHHHHHHH
Q 005374 211 IFFRR------GLPSLVAFPPGCKSSDCMTRF---EGELSVDAVTDWFATA 252 (699)
Q Consensus 211 ~f~V~------gyPTl~~f~~g~~~~~~~~~Y---~G~rs~~~Iv~fi~k~ 252 (699)
.|.|. .+|+.+++-..... ....+ ...++.+.+++.+...
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I--~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVL--RQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE--EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeE--EEEEecCCCCCCCHHHHHHHHHHh
Confidence 34465 57998888543332 11111 2246788888887654
No 354
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.07 E-value=0.007 Score=52.76 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=62.0
Q ss_pred cccchhhhhhhhhc-CCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEE
Q 005374 262 YTKESMGKNFLAKT-GPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (699)
Q Consensus 262 it~~~~~~~Fl~~~-~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvl 336 (699)
+++.+.++..+... ..+++.+++| ...| ....+.+..++..+. .+.|..|.... ...++++|+|.+.|++++
T Consensus 11 i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~ 87 (118)
T 2vm1_A 11 CHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDE--LKDVAEAYNVEAMPTFLF 87 (118)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--SHHHHHHTTCCSBSEEEE
T ss_pred ecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEccc--CHHHHHHcCCCcCcEEEE
Confidence 44444456655532 1134555544 4322 224566677777775 68888886533 478999999999999999
Q ss_pred EcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 337 fk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
|+++. ....+.| .+.+.|.++|...
T Consensus 88 ~~~g~-~~~~~~g-~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 88 IKDGE-KVDSVVG-GRKDDIHTKIVAL 112 (118)
T ss_dssp EETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred EeCCe-EEEEecC-CCHHHHHHHHHHH
Confidence 97533 2223566 5788899998765
No 355
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.05 E-value=0.018 Score=49.80 Aligned_cols=96 Identities=15% Similarity=0.184 Sum_probs=61.4
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
++.++ ++..+.... +++.++.| .+.| ....+.+..++..+. .+.|+.|...+ ....++++|+|.+.||++++
T Consensus 10 l~~~~-~~~~~~~~~-~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~ 85 (111)
T 2pu9_C 10 VNKDT-FWPIVKAAG-DKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKIL 85 (111)
T ss_dssp ECTTT-HHHHHTTCT-TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSBSSEEEEE
T ss_pred echHH-HHHHHHhcC-CCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCc-chHHHHHHcCCCeeeEEEEE
Confidence 55444 555565322 34545544 4322 224566677777776 48888887542 24789999999999999998
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++. ....+.|. +.+.|.++|+..
T Consensus 86 ~~G~-~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 86 KENS-VVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp SSSS-EEEEEESS-CHHHHHHHHHHH
T ss_pred eCCc-EEEEEcCC-CHHHHHHHHHHh
Confidence 7643 22235665 578898888754
No 356
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.05 E-value=0.0052 Score=57.82 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=44.4
Q ss_pred CCCcEEEEEe-ccCCCCCC-CcchHHHHHHHHhhcc-cc-eeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk-~l~p~~~~~A~~L~g~-~~-va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.|| +.||+.|. .-.|.+.++.++++.. +. |..|+.+........+++++
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~ 93 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYP 93 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcC
Confidence 4678889998 89999999 8999999999998643 36 88888775545555777776
No 357
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.02 E-value=0.0076 Score=53.79 Aligned_cols=68 Identities=10% Similarity=0.101 Sum_probs=48.6
Q ss_pred HHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHhhcc
Q 005374 299 ISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 299 ~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~~~~ 366 (699)
++..+...+.+..|.........++++|+|.+.|++++|..+++....+.|..+.+.|.+||+....+
T Consensus 55 ~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 55 VADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp HHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred HHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 34444445667766543223568999999999999999954454433468888889999999987655
No 358
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.01 E-value=0.0075 Score=53.62 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=64.6
Q ss_pred cccchhhhhhhhhc-CCCcEEEEEEc----CCCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEE
Q 005374 262 YTKESMGKNFLAKT-GPHKVKVIFFS----KTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (699)
Q Consensus 262 it~~~~~~~Fl~~~-~~~~v~vl~f~----~~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvl 336 (699)
+++.+.++..+... ..+++.+++|. ..|....+.+..++..+. .+.|..|... ....++++|+|...|++++
T Consensus 19 i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~ 95 (130)
T 1wmj_A 19 CHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVD--ELKEVAEKYNVEAMPTFLF 95 (130)
T ss_dssp CSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTT--TSGGGHHHHTCCSSCCCCB
T ss_pred cCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEecc--chHHHHHHcCCCccceEEE
Confidence 44434355555542 23455566553 345557788888888775 5777777543 2467999999999999999
Q ss_pred EcCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 337 LKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 337 fk~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
|+++. ....+.| .+.+.|.++|+...
T Consensus 96 ~~~g~-~~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 96 IKDGA-EADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp CTTTT-CCBCCCT-TCTTTHHHHHHHHT
T ss_pred EeCCe-EEEEEeC-CCHHHHHHHHHHHH
Confidence 96543 3233566 57788999987753
No 359
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.00 E-value=0.012 Score=52.42 Aligned_cols=92 Identities=13% Similarity=0.146 Sum_probs=59.0
Q ss_pred hhhhhhhcCCCcEEEEEE-cC-------CC---CCchHHHHHHHHhccCCceEEEEEccc-----cccHhHHhhcCCCCC
Q 005374 268 GKNFLAKTGPHKVKVIFF-SK-------TG---ERASPFVRQISRNYWAYASFAFVLWRE-----EESSIWWNTFEVESA 331 (699)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f-~~-------~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~-----~~s~~l~~kf~V~~~ 331 (699)
++..+.... +++.++.| .+ -| ....|.+..++.++.+.+.|..|...+ .....++++|+|.+.
T Consensus 15 ~~~~~~~~~-~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~ 93 (123)
T 1wou_A 15 FHRAVEQHN-GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAV 93 (123)
T ss_dssp HHHHHHTTT-TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSS
T ss_pred HHHHHHHhC-CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCee
Confidence 555554322 45656655 44 22 224567777888887788888887631 224679999999999
Q ss_pred CEEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 332 PAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 332 PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
||+++|++ +....-+.| .+.+.|.+||++
T Consensus 94 Pt~~~~~~-~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 94 PTLLKYGT-PQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp SEEEETTS-SCEEEGGGG-GCHHHHHHHHHC
T ss_pred CEEEEEcC-CceEecccc-CCHHHHHHHHhc
Confidence 99999987 222121232 466778888864
No 360
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=95.98 E-value=0.0095 Score=55.45 Aligned_cols=93 Identities=15% Similarity=0.204 Sum_probs=63.7
Q ss_pred hhhhhhhcCCCcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCC
Q 005374 268 GKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (699)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~ 343 (699)
++..+... .+++.+|.| .+- |....|.+..++.+|.+.+.|+.|.... ..+++++|+|.+.||+++++++...
T Consensus 14 ~~~~i~~~-~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~~v 90 (149)
T 3gix_A 14 VDQAIKST-AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQ--TAVYTQYFDISYIPSTVFFFNGQHM 90 (149)
T ss_dssp HHHHHHHC-CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTT--CCHHHHHTTCCSSSEEEEEETTEEE
T ss_pred HHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCc--CHHHHHHcCCCccCeEEEEECCeEE
Confidence 55555322 345666655 332 3345677788888888878888887533 4689999999999999999875321
Q ss_pred c--------eeecC-CCChhHHHHHHHHh
Q 005374 344 P--------VVYYG-SFNNSRLSEVMEQN 363 (699)
Q Consensus 344 p--------v~y~g-~~~~~~L~~fi~~~ 363 (699)
. ..+.| ..+.+.|.++|+..
T Consensus 91 ~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 91 KVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred EeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 0 23567 67788888888764
No 361
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=95.98 E-value=0.0069 Score=61.94 Aligned_cols=98 Identities=13% Similarity=0.009 Sum_probs=62.2
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHHhC-------C------------CCc
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------P------------IGQ 210 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~k~-------~------------i~~ 210 (699)
.++++||.|| +.||+.|..-.|.+.+++++++.. +.|..|+++........++++ + +.+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 4678888898 999999999999999999999764 367777777433323333322 1 112
Q ss_pred ccccc------cccEEEEcCCCCCCCCcccccc----CCcCHHHHHHHHHHH
Q 005374 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATA 252 (699)
Q Consensus 211 ~f~V~------gyPTl~~f~~g~~~~~~~~~Y~----G~rs~~~Iv~fi~k~ 252 (699)
.|.|. .+|+++++-..... . ..+. -.++.+.|++.+...
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I--~-~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGIL--R-QITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBE--E-EEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeE--E-EEEecCCCCCCCHHHHHHHHHhh
Confidence 23343 47888888543332 1 1122 256778888777643
No 362
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=95.97 E-value=0.0074 Score=60.18 Aligned_cols=99 Identities=8% Similarity=0.058 Sum_probs=63.6
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+.+.+.+...+.....+++.||.| .+. |....+.+..+|..|. .+.|+.|... ...++.+|+|.++||+++|
T Consensus 104 i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~---~~~l~~~~~i~~~PTl~~~ 179 (217)
T 2trc_P 104 LETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS---NTGAGDRFSSDVLPTLLVY 179 (217)
T ss_dssp CCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH---HHTCSTTSCGGGCSEEEEE
T ss_pred cCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC---cHHHHHHCCCCCCCEEEEE
Confidence 433333555554433335555544 332 3335677777888874 7889988754 4568899999999999999
Q ss_pred cCCCCCceeecCCCC-------hhHHHHHHHHhhc
Q 005374 338 KDPGVKPVVYYGSFN-------NSRLSEVMEQNKL 365 (699)
Q Consensus 338 k~~~~~pv~y~g~~~-------~~~L~~fi~~~~~ 365 (699)
+++. ....+.|..+ .+.|..||..+..
T Consensus 180 ~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~g~ 213 (217)
T 2trc_P 180 KGGE-LISNFISVAEQFAEDFFAADVESFLNEYGL 213 (217)
T ss_dssp ETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTTTC
T ss_pred ECCE-EEEEEeCCcccCcccCCHHHHHHHHHHcCC
Confidence 8543 2223455433 4789999987653
No 363
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=95.97 E-value=0.014 Score=55.29 Aligned_cols=98 Identities=9% Similarity=-0.059 Sum_probs=64.0
Q ss_pred CCCcEEEEEeccCCCC-CCCcchHHHHHHHHhhc---ccceeeeeccc----------------------------hhhh
Q 005374 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG---IANTGMVELGD----------------------------IRLA 199 (699)
Q Consensus 152 ~~~~~lV~FYapwC~h-Ck~l~p~~~~~A~~L~g---~~~va~Vdc~~----------------------------~~~~ 199 (699)
.+++++|.||+.||+. |....|.+.++.+++.. .+.|..|.++. ....
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 3789999999999985 99999999999999852 23555555431 0122
Q ss_pred hHHHHhCCCCc---ccccccccEEEEcCCCCCCCCccccccCC-cCHHHHHHHHHHH
Q 005374 200 THLAERKPIGQ---IFFRRGLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATA 252 (699)
Q Consensus 200 ~~L~~k~~i~~---~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~-rs~~~Iv~fi~k~ 252 (699)
..+++.+|+.- .+.+.+.|+++++-+.+.. ...|.|. .+.+.|.+.+.+.
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i---~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQI---KDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECTTSBE---EEEEESSSCCHHHHHHHHHHH
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECCCCeE---EEEEeCCCCCHHHHHHHHHHh
Confidence 34566655330 1234567887777543332 2234564 6789999988876
No 364
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=95.95 E-value=0.0065 Score=53.50 Aligned_cols=88 Identities=15% Similarity=0.209 Sum_probs=55.2
Q ss_pred hhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEcccc----ccHhHHhhcCCCCCCEEEEEcC
Q 005374 268 GKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREE----ESSIWWNTFEVESAPAIVFLKD 339 (699)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~----~s~~l~~kf~V~~~PtIvlfk~ 339 (699)
++..+.. +++.++.| .+.| ....|.+..++..+...+.+ +..... ....++++|+|.+.||+++|++
T Consensus 22 ~~~~~~~---~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~--~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~ 96 (118)
T 1zma_A 22 AQEALDK---KETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYF--INSEEPSQLNDLQAFRSRYGIPTVPGFVHITD 96 (118)
T ss_dssp HHHHHHT---TCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEE--EETTCGGGHHHHHHHHHHHTCCSSCEEEEEET
T ss_pred HHHHHhC---CCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEE--EECCCcCcHHHHHHHHHHcCCCCCCeEEEEEC
Confidence 4554542 33445555 4332 23456677777777544444 433221 1247889999999999999985
Q ss_pred CCCCceeecCCCChhHHHHHHH
Q 005374 340 PGVKPVVYYGSFNNSRLSEVME 361 (699)
Q Consensus 340 ~~~~pv~y~g~~~~~~L~~fi~ 361 (699)
+ .....+.|..+.+.|.+||+
T Consensus 97 G-~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 97 G-QINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp T-EEEEECCTTCCHHHHHHHHT
T ss_pred C-EEEEEecCCCCHHHHHHHhh
Confidence 4 33334688888899999875
No 365
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=95.92 E-value=0.0069 Score=55.08 Aligned_cols=91 Identities=22% Similarity=0.229 Sum_probs=61.6
Q ss_pred hhhhhhhcCCCcEEEEEEcCCC---CCchHHHHHHHHhccCCceEEEEEccc-------cccHhHHhhcCCCCCCEEEEE
Q 005374 268 GKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWRE-------EESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~-------~~s~~l~~kf~V~~~PtIvlf 337 (699)
++..+.+ .+.|.|+.+-| ....|.+..++..+. +.|+.|...+ .....++++|+|.+.||+++|
T Consensus 26 ~~~~~~~----~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~ 99 (135)
T 3emx_A 26 FRQLLQG----DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFY 99 (135)
T ss_dssp HHHHHTS----SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEE
T ss_pred HHHHhCC----cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEE
Confidence 5555543 34444544432 234577777887775 8888887622 224679999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHhhc
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQNKL 365 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~~~ 365 (699)
++ ++....+.|..+.+.+..+++...-
T Consensus 100 ~~-G~~v~~~~G~~~~~~~~~~i~~~~~ 126 (135)
T 3emx_A 100 KE-GRIVDKLVGATPWSLKVEKAREIYG 126 (135)
T ss_dssp ET-TEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred cC-CEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 94 4333346888899999999887643
No 366
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.92 E-value=0.015 Score=53.02 Aligned_cols=92 Identities=11% Similarity=0.066 Sum_probs=59.0
Q ss_pred hhhhhhhcCCCcEEEEEEc-CC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCC
Q 005374 268 GKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (699)
Q Consensus 268 ~~~Fl~~~~~~~v~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~ 343 (699)
+...+.....+++.+|.|. +- |....+.+..+|.+|. .+.|+.|..... .++|+|...||+++|+++. .
T Consensus 20 ~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~-----~~~~~i~~~Pt~~~~~~G~-~ 92 (135)
T 2dbc_A 20 YVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSC-----IEHYHDNCLPTIFVYKNGQ-I 92 (135)
T ss_dssp HHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSS-----CSSCCSSCCSEEEEESSSS-C
T ss_pred HHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcC-----cccCCCCCCCEEEEEECCE-E
Confidence 4555544333456666563 32 2335677777888774 578887764332 3789999999999998543 3
Q ss_pred ceeecCC-------CChhHHHHHHHHhhcc
Q 005374 344 PVVYYGS-------FNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 344 pv~y~g~-------~~~~~L~~fi~~~~~~ 366 (699)
...+.|. ++.+.|..++..+...
T Consensus 93 v~~~~G~~~~~~~~~~~~~l~~~l~~~~~i 122 (135)
T 2dbc_A 93 EGKFIGIIECGGINLKLEELEWKLSEVGAI 122 (135)
T ss_dssp SEEEESTTTTTCTTCCHHHHHHHHHHHTSS
T ss_pred EEEEEeEEeeCCCcCCHHHHHHHHHHcCCc
Confidence 2234443 3678899999887543
No 367
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=95.91 E-value=0.0017 Score=63.43 Aligned_cols=43 Identities=7% Similarity=-0.007 Sum_probs=36.2
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeecc
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~ 194 (699)
..++.+|+|+++||+||+++.|.++++++.+.+.+.+..+...
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 4688999999999999999999999999887665566666654
No 368
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=95.87 E-value=0.0099 Score=53.19 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=61.5
Q ss_pred cccchhhhhhhhhcCCCcEEEEEEcC-CC---CCchHHHHHHHHhccCCceEEEEEccccc--cHhHHhhcCCCC-CCEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEE--SSIWWNTFEVES-APAI 334 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f~~-~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~--s~~l~~kf~V~~-~PtI 334 (699)
+++.+.+++++.. +++.+++|.. .| ....+.+...+.. +.+.|++|.+.... +..++.+|+|.+ .|++
T Consensus 11 i~s~e~f~~ii~~---~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~ 85 (112)
T 3iv4_A 11 LSSIDQFEQVIEE---NKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQA 85 (112)
T ss_dssp CCSHHHHHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEE
T ss_pred cCCHHHHHHHHhc---CCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCeE
Confidence 4555557777764 4576776643 33 1233455555553 67999999875421 145899999995 8999
Q ss_pred EEEcCCCCCceeecCCCChhHHHHHH
Q 005374 335 VFLKDPGVKPVVYYGSFNNSRLSEVM 360 (699)
Q Consensus 335 vlfk~~~~~pv~y~g~~~~~~L~~fi 360 (699)
++|+++...-....+.++...|.+.+
T Consensus 86 il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 86 FYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEECCEEEEEeeccccCHHHHHHhh
Confidence 99998653322347788888887654
No 369
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=95.85 E-value=0.0028 Score=53.59 Aligned_cols=57 Identities=16% Similarity=0.205 Sum_probs=39.5
Q ss_pred EEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhh-hhHHHHhCCCCcccccccccEEEEcCCC
Q 005374 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (699)
Q Consensus 156 ~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~-~~~L~~k~~i~~~f~V~gyPTl~~f~~g 226 (699)
-++.|++|||++|+++.+.+++. + +.+..+|+++++. ...+.+.++ +.++|++. .+|
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-----~-i~~~~~di~~~~~~~~~l~~~~~------~~~vP~l~--~~g 64 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-----G-AEFNEIDASATPELRAEMQERSG------RNTFPQIF--IGS 64 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEESTTSHHHHHHHHHHHT------SSCCCEEE--ETT
T ss_pred cEEEEECCCChhHHHHHHHHHHc-----C-CCcEEEECCCCHHHHHHHHHHhC------CCCcCEEE--ECC
Confidence 36789999999999887776653 1 4677788875433 233666666 56999863 355
No 370
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=95.83 E-value=0.011 Score=53.05 Aligned_cols=80 Identities=10% Similarity=0.163 Sum_probs=54.9
Q ss_pred cEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecC-----
Q 005374 279 KVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYG----- 349 (699)
Q Consensus 279 ~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g----- 349 (699)
++.|+.| .+- |....|.+..+|.+|. .+.|..|.... ...+|+|.+.||+++|+++... ..+.|
T Consensus 24 ~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~-----~~~~~~v~~~PT~~~fk~G~~v-~~~~G~~~~g 96 (118)
T 3evi_A 24 VWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNS-----CIQHYHDNCLPTIFVYKNGQIE-AKFIGIIECG 96 (118)
T ss_dssp CEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGG-----TSTTCCGGGCSEEEEEETTEEE-EEEESTTTTT
T ss_pred CeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHH-----hHHHCCCCCCCEEEEEECCEEE-EEEeChhhhC
Confidence 3556655 332 2335678888998885 58999987543 3689999999999999975421 11222
Q ss_pred --CCChhHHHHHHHHhhc
Q 005374 350 --SFNNSRLSEVMEQNKL 365 (699)
Q Consensus 350 --~~~~~~L~~fi~~~~~ 365 (699)
.++.+.|..++.++..
T Consensus 97 g~~~~~~~le~~L~~~g~ 114 (118)
T 3evi_A 97 GINLKLEELEWKLAEVGA 114 (118)
T ss_dssp CSSCCHHHHHHHHHTTTS
T ss_pred CCCCCHHHHHHHHHHcCC
Confidence 4577889999877643
No 371
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=95.83 E-value=0.01 Score=53.89 Aligned_cols=96 Identities=10% Similarity=0.140 Sum_probs=59.6
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.++..+.... +++.+|.| ..-| ....+.+..++..+ .+.|+.|... ....++++|+|.+.|++++|
T Consensus 25 l~~~~~~~~~l~~~~-~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~ 99 (133)
T 3cxg_A 25 LKNTGSLNQVFSSTQ-NSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVD--IHPKLNDQHNIKALPTFEFY 99 (133)
T ss_dssp CCCTTHHHHHHTC-C-CSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ecChhHHHHHHHhcC-CCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEecc--chHHHHHhcCCCCCCEEEEE
Confidence 455444666665432 45656655 3322 22455665566555 4667776543 34789999999999999999
Q ss_pred c--CCCC-CceeecCCCChhHHHHHHHHh
Q 005374 338 K--DPGV-KPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k--~~~~-~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+ ++.. ....+.|. +.+.|.++|+..
T Consensus 100 ~~~~g~g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 100 FNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp EEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred EecCCCeEEEEEEcCC-CHHHHHHHHHHH
Confidence 6 4321 22235675 788899998765
No 372
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=95.81 E-value=0.023 Score=50.15 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=61.2
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++++ ++..+.... +++.++.| .+.| ....+.+..++..+. .+.|..|.... +...++++|+|.+.||++++
T Consensus 23 l~~~~-~~~~~~~~~-~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~ 98 (124)
T 1faa_A 23 VNKDT-FWPIVKAAG-DKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKIL 98 (124)
T ss_dssp ECTTT-HHHHHHHTT-TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSSSSEEEEE
T ss_pred ecchh-HHHHHHhcC-CCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCc-chHHHHHHcCCCeeeEEEEE
Confidence 55444 555554322 44555544 4322 234566777777775 47888886542 24789999999999999999
Q ss_pred cCCCCCceeecCCCChhHHHHHHHHh
Q 005374 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 338 k~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++. ....+.|.. .+.|.++|+..
T Consensus 99 ~~G~-~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 99 KENS-VVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp ETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred eCCc-EEEEEcCCC-HHHHHHHHHHh
Confidence 7643 222356654 78899888764
No 373
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=95.78 E-value=0.0041 Score=58.31 Aligned_cols=87 Identities=15% Similarity=0.191 Sum_probs=57.4
Q ss_pred cCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc---cce------------------------------e-----eee
Q 005374 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANT------------------------------G-----MVE 192 (699)
Q Consensus 151 ~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~---~~v------------------------------a-----~Vd 192 (699)
.+.++.+|.|..++|++|+++.+.++++.+ +.=. ..+ + .-.
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l~~-v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~~~~ 90 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKMTD-VTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSI 90 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTCCS-EEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTTCCC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhcCc-eEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCccHH
Confidence 367889999999999999999988775411 1000 000 0 011
Q ss_pred ccc-hhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 193 LGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 193 c~~-~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
|.. -.....+++++| |+|+||+++ .+|. .+.|..+.+.|.+++.+.
T Consensus 91 ~~~~v~~~~~la~~~g------I~gtPt~vi-~nG~-------~i~G~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 91 CDNPVAETTSLGEQFG------FNGTPTLVF-PNGR-------TQSGYSPMPQLEEIIRKN 137 (147)
T ss_dssp CSCSHHHHHHHHHHTT------CCSSCEEEC-TTSC-------EEESCCCTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhC------CCccCEEEE-ECCE-------EeeCCCCHHHHHHHHHHH
Confidence 221 112334777777 779999998 5663 357989999999998776
No 374
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=95.77 E-value=0.003 Score=59.92 Aligned_cols=57 Identities=11% Similarity=0.154 Sum_probs=45.4
Q ss_pred cCCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhccc-ceeeeeccchhhhhHHHHhCC
Q 005374 151 HDSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 151 ~~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~-~va~Vdc~~~~~~~~L~~k~~ 207 (699)
..++++++.|| +.||+.|..-.|.+.++.++++... .+..|+.+........+++++
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~ 89 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENR 89 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTT
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcC
Confidence 35788888888 9999999999999999998887654 777788775555556777776
No 375
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=94.74 E-value=0.0016 Score=55.33 Aligned_cols=82 Identities=16% Similarity=0.252 Sum_probs=56.2
Q ss_pred CcEEEEEE-cC---CCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCCh
Q 005374 278 HKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (699)
Q Consensus 278 ~~v~vl~f-~~---~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~ 353 (699)
+++.+++| .. .|....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 19 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-g~~~~~~~g~~~~ 95 (106)
T 2yj7_A 19 DKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE--NPNTAAQYGIRSIPTLLLFKN-GQVVDRLVGAQPK 95 (106)
Confidence 34555555 32 33445667777777777667777775432 467999999999999999954 4333346787778
Q ss_pred hHHHHHHHH
Q 005374 354 SRLSEVMEQ 362 (699)
Q Consensus 354 ~~L~~fi~~ 362 (699)
+.|.+|+++
T Consensus 96 ~~l~~~l~~ 104 (106)
T 2yj7_A 96 EALKERIDK 104 (106)
Confidence 888888764
No 376
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=95.72 E-value=0.011 Score=54.64 Aligned_cols=84 Identities=13% Similarity=0.145 Sum_probs=56.6
Q ss_pred CcEEEEEE-cCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCce--------
Q 005374 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPV-------- 345 (699)
Q Consensus 278 ~~v~vl~f-~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv-------- 345 (699)
+++.+|.| .+- |....|.+..++.++.+.+.|+.|.... ..+++++|+|.+.||+++|+++.....
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~ 100 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE--VPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNN 100 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTSSCSCSSCEEEEEETTEEEEEECC-----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc--CHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcc
Confidence 45666655 332 2335677788888887788888887543 467999999999999999986532211
Q ss_pred eecCCCC-hhHHHHHHHHh
Q 005374 346 VYYGSFN-NSRLSEVMEQN 363 (699)
Q Consensus 346 ~y~g~~~-~~~L~~fi~~~ 363 (699)
...|.++ .+.|.++|+..
T Consensus 101 ~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 101 KINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp -CCSCCSCHHHHHHHHHHH
T ss_pred eeeeecCcHHHHHHHHHHH
Confidence 1234443 67788887754
No 377
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=95.70 E-value=0.0089 Score=54.15 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=61.6
Q ss_pred cccchhhhhhhhhc-CCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEE
Q 005374 262 YTKESMGKNFLAKT-GPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (699)
Q Consensus 262 it~~~~~~~Fl~~~-~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvl 336 (699)
+++.+.+++.+... ..+++.+|.| ...| ....+.+..++..+. .+.|..|.... ...++++|+|.+.|++++
T Consensus 29 i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~ 105 (139)
T 3d22_A 29 ITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDE--LSDFSASWEIKATPTFFF 105 (139)
T ss_dssp ECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--SHHHHHHTTCCEESEEEE
T ss_pred eCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcc--cHHHHHHcCCCcccEEEE
Confidence 43333355555321 1134445544 4322 224566777777774 68888886543 478999999999999999
Q ss_pred EcCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 337 LKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 337 fk~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
++++ +....+.|. +.+.|.++|+...
T Consensus 106 ~~~G-~~~~~~~G~-~~~~l~~~l~~~~ 131 (139)
T 3d22_A 106 LRDG-QQVDKLVGA-NKPELHKKITAIL 131 (139)
T ss_dssp EETT-EEEEEEESC-CHHHHHHHHHHHH
T ss_pred EcCC-eEEEEEeCC-CHHHHHHHHHHHh
Confidence 9653 332335676 7888999987653
No 378
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=95.69 E-value=0.0059 Score=58.27 Aligned_cols=55 Identities=13% Similarity=0.080 Sum_probs=43.4
Q ss_pred CCcEEEEEeccCCCCCCCc-chHHHHHHHHhhcc-cc-eeeeeccchhhhhHHHHhCC
Q 005374 153 SKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 153 ~~~~lV~FYapwC~hCk~l-~p~~~~~A~~L~g~-~~-va~Vdc~~~~~~~~L~~k~~ 207 (699)
+.++|+.|++.||+.|..- .|.+.++.++++.. +. |..|+.+........+++++
T Consensus 44 k~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~ 101 (171)
T 2pwj_A 44 KKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQ 101 (171)
T ss_dssp SEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhC
Confidence 3577889999999999996 99999999998654 36 88888875445555777776
No 379
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=95.68 E-value=0.0089 Score=51.99 Aligned_cols=75 Identities=7% Similarity=0.060 Sum_probs=46.3
Q ss_pred CcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccc--hhhhhH----HHHhCCCCcccccccccEEEEcCCCC
Q 005374 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD--IRLATH----LAERKPIGQIFFRRGLPSLVAFPPGC 227 (699)
Q Consensus 154 ~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~--~~~~~~----L~~k~~i~~~f~V~gyPTl~~f~~g~ 227 (699)
..-++.|+++||++|+++.+.+++.. +.+-.+|.+. ...... |.+..+ +.++|+|++ +|.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g------~~~vP~l~i--~~~ 86 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNP------SVSFPTTII--NDE 86 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCT------TCCSCEEEE--TTT
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCC------CCccCEEEE--CCC
Confidence 34577799999999999988877653 2344455542 111111 223356 569999887 231
Q ss_pred CCCCccccccCCcCHHHHHHHH
Q 005374 228 KSSDCMTRFEGELSVDAVTDWF 249 (699)
Q Consensus 228 ~~~~~~~~Y~G~rs~~~Iv~fi 249 (699)
.+-|..+.+.|.+++
T Consensus 87 -------~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 -------KAIVGFKEKEIRESL 101 (103)
T ss_dssp -------EEEESCCHHHHHHHT
T ss_pred -------EEEEcCCHHHHHHHh
Confidence 234667777777654
No 380
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=95.63 E-value=0.0041 Score=58.78 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=43.5
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.|| +.||+.|....|.+.++.+++ ..+.|..|.++........+++++
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~ 101 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFN 101 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcC
Confidence 3678899998 899999999999999998888 445777888875544555777776
No 381
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=95.63 E-value=0.0017 Score=63.23 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=35.2
Q ss_pred CCcEEEEEeccCCCCCCCcchHH---HHHHHHhhcccceeeeecc
Q 005374 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELG 194 (699)
Q Consensus 153 ~~~~lV~FYapwC~hCk~l~p~~---~~~A~~L~g~~~va~Vdc~ 194 (699)
..+.+|+||+.||+||+++.|.+ +++++.+.+.++|..++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEech
Confidence 46899999999999999999986 6787777666677777766
No 382
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=95.59 E-value=0.014 Score=51.66 Aligned_cols=85 Identities=19% Similarity=0.207 Sum_probs=55.9
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCC---CCCceeecCC
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP---GVKPVVYYGS 350 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~---~~~pv~y~g~ 350 (699)
+++.++.| .+.| ....+.+..++..+ +.+.|+.|.... ...++++|+|.+.|++++|++. ++....+.|.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~--~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~ 99 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK--NGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGA 99 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC--CHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCC
Confidence 34555555 4332 22456666777777 678898887543 4789999999999999999762 2221224664
Q ss_pred CChhHHHHHHHHhhcc
Q 005374 351 FNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 351 ~~~~~L~~fi~~~~~~ 366 (699)
....|...+..+..+
T Consensus 100 -~~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 100 -DVSRIKADIEKFKHH 114 (118)
T ss_dssp -CHHHHHHHHHHHC--
T ss_pred -CHHHHHHHHHHhhhc
Confidence 455699999887655
No 383
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=95.45 E-value=0.0044 Score=60.07 Aligned_cols=40 Identities=13% Similarity=0.217 Sum_probs=34.5
Q ss_pred CCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeecc
Q 005374 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (699)
Q Consensus 153 ~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~ 194 (699)
+++.+|+|++.||+||+++.|.++++.+.+ + +.+..+...
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~-v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G-TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T-SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C-CeEEEEecc
Confidence 678999999999999999999999999988 3 466666654
No 384
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=95.42 E-value=0.008 Score=61.38 Aligned_cols=88 Identities=10% Similarity=-0.027 Sum_probs=60.6
Q ss_pred cEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhh------------------------hHHHHhCCCC
Q 005374 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA------------------------THLAERKPIG 209 (699)
Q Consensus 155 ~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~------------------------~~L~~k~~i~ 209 (699)
++|+.|+++||+.|....|.+.+++++++.. +.|..|+++....+ ..+++.|+
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~yg-- 113 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLG-- 113 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHT--
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhC--
Confidence 4566789999999999999999999999764 47888888642211 22555555
Q ss_pred cccccc-------cccEEEEcC-CCCCCCCccccccC----CcCHHHHHHHHHHH
Q 005374 210 QIFFRR-------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (699)
Q Consensus 210 ~~f~V~-------gyPTl~~f~-~g~~~~~~~~~Y~G----~rs~~~Iv~fi~k~ 252 (699)
|. ++|+++++- +|... ..+.| .|+.+.|...+...
T Consensus 114 ----v~~~~~g~~~~p~~fIID~dG~I~----~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 114 ----LLHAESATHTVRGVFIVDARGVIR----TMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp ----CCCTTCSSSCCEEEEEECTTSBEE----EEEEECTTBCCCHHHHHHHHHHH
T ss_pred ----CccccCCCcccceEEEECCCCeEE----EEEecCCcccchhHHHHHHHHHH
Confidence 54 899888875 45321 11122 36888888877654
No 385
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=95.42 E-value=0.0045 Score=58.13 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=42.9
Q ss_pred CCCcEEEEEec-cCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FYa-pwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.||+ .||++|..-.|.+.++.+++ ..+.|..|+++........+++++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~ 96 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEG 96 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcC
Confidence 46789999994 99999999999999998888 445777888875444455677766
No 386
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=95.41 E-value=0.0095 Score=58.35 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=41.6
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.|| +.||+.|..-.|.+.++.++++ .+.|..|.++........+++++
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~-~v~vv~Is~D~~~~~~~~~~~~~ 132 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGELE-NTVVLCISSDLPFAQSRFCGAEG 132 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTST-TEEEEEEESSCHHHHTTCTTTTT
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHhC-CCEEEEEECCCHHHHHHHHHHcC
Confidence 4678899998 7899999999999999999883 35777788875444333455554
No 387
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=95.39 E-value=0.0092 Score=56.77 Aligned_cols=56 Identities=9% Similarity=-0.006 Sum_probs=43.3
Q ss_pred CCCcEEEEEe-ccCCCCCCC-cchHHHHHHHHhhcc-c-ceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVY-SDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~-l~p~~~~~A~~L~g~-~-~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.|| +.||+.|.. -.|.+.+++++++.. + .|..|+.+........+++.+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~ 89 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHG 89 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 4567788887 999999998 899999999988643 4 677888775445555777776
No 388
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=95.33 E-value=0.014 Score=52.34 Aligned_cols=85 Identities=11% Similarity=0.130 Sum_probs=56.2
Q ss_pred CcEEEEEE-cCCC---CCchHHHH--HHHHhccCCceEEEEEccc-cccHhHHhhcCC---CCCCEEEEEcCCCCCceee
Q 005374 278 HKVKVIFF-SKTG---ERASPFVR--QISRNYWAYASFAFVLWRE-EESSIWWNTFEV---ESAPAIVFLKDPGVKPVVY 347 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~--~~A~~~~~~~~Fg~V~~~~-~~s~~l~~kf~V---~~~PtIvlfk~~~~~pv~y 347 (699)
+++.+|.| ..-| ....+.+. .++..+.+.+.|..|.... .....++++|+| .+.|++++|..+++....+
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~ 108 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTT 108 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEEC
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEe
Confidence 34556655 3322 23456666 6677776678888887632 234789999999 9999999995444433334
Q ss_pred cC-------CCChhHHHHHHHH
Q 005374 348 YG-------SFNNSRLSEVMEQ 362 (699)
Q Consensus 348 ~g-------~~~~~~L~~fi~~ 362 (699)
.| .++.+.+.+|++.
T Consensus 109 ~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 109 KGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp CSCTTTTGGGSCHHHHHHHHHH
T ss_pred cCCcccccccCCHHHHHHHHHH
Confidence 55 4577888888865
No 389
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=95.32 E-value=0.027 Score=57.32 Aligned_cols=100 Identities=9% Similarity=0.087 Sum_probs=63.2
Q ss_pred cccchhhhhhhhhcCCCcEEEEEE-cC---CCCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEE
Q 005374 262 YTKESMGKNFLAKTGPHKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl~f-~~---~~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlf 337 (699)
+++.+.+...+.....+++.||.| .+ .|....|.+..+|..|.+ +.|+.|.... ..++.+|+|.++||+++|
T Consensus 117 i~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~---~~l~~~~~I~~~PTll~~ 192 (245)
T 1a0r_P 117 LESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN---TGAGDRFSSDVLPTLLVY 192 (245)
T ss_dssp CCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH---HCCTTSSCTTTCSEEEEE
T ss_pred eCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc---HHHHHHCCCCCCCEEEEE
Confidence 433333555554322345656644 33 233356788888988864 8899887532 458899999999999999
Q ss_pred cCCCCCceeecC-------CCChhHHHHHHHHhhcc
Q 005374 338 KDPGVKPVVYYG-------SFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 338 k~~~~~pv~y~g-------~~~~~~L~~fi~~~~~~ 366 (699)
+++.. ...+.| .++.+.|..||..+...
T Consensus 193 ~~G~~-v~~~vG~~~~~g~~~~~e~Le~~L~~~g~l 227 (245)
T 1a0r_P 193 KGGEL-LSNFISVTEQLAEEFFTGDVESFLNEYGLL 227 (245)
T ss_dssp ETTEE-EEEETTGGGGSCTTCCHHHHHHHHHTTTCS
T ss_pred ECCEE-EEEEeCCcccccccccHHHHHHHHHHcCCC
Confidence 86432 111222 24567899999887543
No 390
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=95.18 E-value=0.011 Score=57.45 Aligned_cols=55 Identities=13% Similarity=0.106 Sum_probs=41.9
Q ss_pred CCc-EEEEEeccCCCCCCC-cchHHHHHHHHhhccc-c-eeeeeccchhhhhHHHHhCC
Q 005374 153 SKP-WLIQVYSDGSYLCGQ-FSGAWKTIAALLEGIA-N-TGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 153 ~~~-~lV~FYapwC~hCk~-l~p~~~~~A~~L~g~~-~-va~Vdc~~~~~~~~L~~k~~ 207 (699)
+++ +|+.|.+.||+.|.. -.|.+.+++++++..+ . |..|+.+........+++++
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~ 114 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSG 114 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhC
Confidence 454 455555999999999 5999999999997653 6 88899886555556777776
No 391
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=95.10 E-value=0.0086 Score=52.82 Aligned_cols=56 Identities=16% Similarity=0.269 Sum_probs=36.7
Q ss_pred EEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccch----hh-hhHHHHhCCCCcccccccccEEEEcCCC
Q 005374 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----RL-ATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (699)
Q Consensus 157 lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~----~~-~~~L~~k~~i~~~f~V~gyPTl~~f~~g 226 (699)
++.|++|||++|+++.+.+++.. +.+..+|.+.. .. ...|.+..| +.++|+| |.+|
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~~------i~~~~~di~~~~~~~~~~~~~l~~~~g------~~tvP~i--fi~g 81 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRLG------VQPLVVELDQLGPQGPQLQKVLERLTG------QHTVPNV--FVCG 81 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHHHHHHHS------CCSSCEE--EETT
T ss_pred EEEEECCCChhHHHHHHHHHHcC------CCCeEEEeecCCCChHHHHHHHHHHhC------CCCcCEE--EECC
Confidence 67799999999999888777642 24455666531 22 122555556 5699998 4466
No 392
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=95.08 E-value=0.03 Score=48.14 Aligned_cols=78 Identities=17% Similarity=0.119 Sum_probs=49.0
Q ss_pred EEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCcccc
Q 005374 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (699)
Q Consensus 156 ~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~ 235 (699)
-++.|..|||++|.+....+++. | +.+-.+|.++++.......+...+ .+++|+|++ .+|..
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-----g-i~y~~idi~~d~~~~~~~~~~~~G----~~tVP~I~i-~Dg~~------- 66 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-----R-IAYDEVDIEHNRAAAEFVGSVNGG----NRTVPTVKF-ADGST------- 66 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-----T-CCCEEEETTTCHHHHHHHHHHSSS----SSCSCEEEE-TTSCE-------
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-----C-CceEEEEcCCCHHHHHHHHHHcCC----CCEeCEEEE-eCCEE-------
Confidence 46778899999998866544331 2 367788888665544433332112 558999765 45531
Q ss_pred ccCCcCHHHHHHHHHHH
Q 005374 236 FEGELSVDAVTDWFATA 252 (699)
Q Consensus 236 Y~G~rs~~~Iv~fi~k~ 252 (699)
-+..+.+.|.+++.+.
T Consensus 67 -l~~~~~~el~~~L~el 82 (92)
T 2lqo_A 67 -LTNPSADEVKAKLVKI 82 (92)
T ss_dssp -EESCCHHHHHHHHHHH
T ss_pred -EeCCCHHHHHHHHHHh
Confidence 1234678888888765
No 393
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=95.07 E-value=0.013 Score=50.95 Aligned_cols=61 Identities=13% Similarity=0.046 Sum_probs=41.6
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhh-HHHHhC-CCCcccccccccEEEEcCCC
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERK-PIGQIFFRRGLPSLVAFPPG 226 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~-~L~~k~-~i~~~f~V~gyPTl~~f~~g 226 (699)
+...-++.|.+|||++|+++.+.+++.. +.+..+|.+.++... .+.+.. + +.++|+|+ .+|
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~~------i~y~~idI~~~~~~~~~l~~~~~g------~~~vP~if--i~g 75 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRKG------VEFQEYCIDGDNEAREAMAARANG------KRSLPQIF--IDD 75 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHHT------CCCEEEECTTCHHHHHHHHHHTTT------CCCSCEEE--ETT
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHCC------CCCEEEEcCCCHHHHHHHHHHhCC------CCCCCEEE--ECC
Confidence 3445667899999999999888777652 356778887554322 244444 5 56999874 455
No 394
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=93.91 E-value=0.0045 Score=55.39 Aligned_cols=86 Identities=22% Similarity=0.250 Sum_probs=55.5
Q ss_pred CcEEEEEE-c---CCCCCchHHH---HHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcC-CCCC--ceee
Q 005374 278 HKVKVIFF-S---KTGERASPFV---RQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKD-PGVK--PVVY 347 (699)
Q Consensus 278 ~~v~vl~f-~---~~~~~~~~~~---~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~-~~~~--pv~y 347 (699)
+++.+|.| . ..|....+.+ ..++..+.+.+.|..|.....+...++++|+|.++|++++|.. +++. ...+
T Consensus 19 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~ 98 (130)
T 2lst_A 19 GRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRL 98 (130)
Confidence 44555544 2 2334445555 5566666666777777654333467999999999999999943 2332 2336
Q ss_pred cCCCChhHHHHHHHHh
Q 005374 348 YGSFNNSRLSEVMEQN 363 (699)
Q Consensus 348 ~g~~~~~~L~~fi~~~ 363 (699)
.|..+.+.|.++|+..
T Consensus 99 ~G~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 99 FGSRPRAEFLKELRQV 114 (130)
Confidence 7777778888887653
No 395
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=94.90 E-value=0.02 Score=54.96 Aligned_cols=55 Identities=9% Similarity=0.020 Sum_probs=40.4
Q ss_pred CCcEEEEEe-ccCCCCCC-CcchHHHHHHHHhhccc--ceeeeeccchhhhhHHHHhCC
Q 005374 153 SKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGIA--NTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 153 ~~~~lV~FY-apwC~hCk-~l~p~~~~~A~~L~g~~--~va~Vdc~~~~~~~~L~~k~~ 207 (699)
+++++|.|| +.||+.|. .-.|.+.+++++++... .||.|.++........+++.+
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~ 101 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHK 101 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhC
Confidence 455555555 99999999 58899999999997653 444577775545556788876
No 396
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=94.89 E-value=0.012 Score=51.79 Aligned_cols=67 Identities=9% Similarity=0.107 Sum_probs=43.6
Q ss_pred CCCcccccCCCcEEEEEec-----cCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhh-hHHHHhCCCCcccccccc
Q 005374 144 EDFPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGL 217 (699)
Q Consensus 144 ~nF~~~v~~~~~~lV~FYa-----pwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~-~~L~~k~~i~~~f~V~gy 217 (699)
+.+++.+.+++ +|.|+. |||++|+++...+++. + +.+..||.++++.. ..|.+..+ ..++
T Consensus 6 ~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~-----~-i~~~~vdi~~~~~~~~~l~~~~g------~~~v 71 (109)
T 1wik_A 6 SGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST-----G-VEYETFDILEDEEVRQGLKTFSN------WPTY 71 (109)
T ss_dssp CCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT-----C-SCEEEEESSSCHHHHHHHHHHHS------CCSS
T ss_pred HHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc-----C-CCeEEEECCCCHHHHHHHHHHhC------CCCC
Confidence 34555665554 455777 9999999887766553 2 46888888865432 23555555 5589
Q ss_pred cEEEEcCCC
Q 005374 218 PSLVAFPPG 226 (699)
Q Consensus 218 PTl~~f~~g 226 (699)
|+| |.+|
T Consensus 72 P~i--fi~g 78 (109)
T 1wik_A 72 PQL--YVRG 78 (109)
T ss_dssp CEE--ECSS
T ss_pred CEE--EECC
Confidence 985 5566
No 397
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=94.64 E-value=0.059 Score=47.52 Aligned_cols=69 Identities=22% Similarity=0.319 Sum_probs=50.3
Q ss_pred hHHHHHHHHhccCCceEEEEEccc---------------------cccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCC
Q 005374 293 SPFVRQISRNYWAYASFAFVLWRE---------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF 351 (699)
Q Consensus 293 ~~~~~~~A~~~~~~~~Fg~V~~~~---------------------~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~ 351 (699)
.+.+..++.++. .+.|..|...+ .....+++.|+|.+.|+++++..++... .+.|..
T Consensus 44 ~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~ 121 (136)
T 1zzo_A 44 APVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRM 121 (136)
T ss_dssp HHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCC
T ss_pred HHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCC
Confidence 455555666676 68888887532 1235688999999999999997655443 578888
Q ss_pred ChhHHHHHHHHh
Q 005374 352 NNSRLSEVMEQN 363 (699)
Q Consensus 352 ~~~~L~~fi~~~ 363 (699)
+.+.|.++|+..
T Consensus 122 ~~~~l~~~l~~~ 133 (136)
T 1zzo_A 122 SQDELTRRVTAL 133 (136)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 888898888753
No 398
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=94.63 E-value=0.038 Score=49.51 Aligned_cols=83 Identities=11% Similarity=0.155 Sum_probs=54.8
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhcc-CCceEEEEEccc-----------------------cccHhHHhhcCCC
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYW-AYASFAFVLWRE-----------------------EESSIWWNTFEVE 329 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~-~~~~Fg~V~~~~-----------------------~~s~~l~~kf~V~ 329 (699)
+++.+|.| ...| ....+.+..++..|. +.+.|..|.... .....+++.|+|.
T Consensus 34 gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 113 (145)
T 3erw_A 34 GQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHII 113 (145)
T ss_dssp TSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCcC
Confidence 45656544 3322 223455555666676 467777776532 1134789999999
Q ss_pred CCCEEEEEcCCCCCceeecCCCChhHHHHHH
Q 005374 330 SAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (699)
Q Consensus 330 ~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi 360 (699)
+.|+++++..++.....+.|..+.+.|.++|
T Consensus 114 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 114 TIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp EESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred ccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 9999999966565444568888888888876
No 399
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=94.59 E-value=0.011 Score=55.59 Aligned_cols=54 Identities=17% Similarity=0.049 Sum_probs=41.5
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.|| +.||++|..-.|.+.++.++ ++ +.|..|+++........+++++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~~-~~vv~is~d~~~~~~~~~~~~~ 99 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-EE-GIVLTISADLPFAQKRWCASAG 99 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-TT-SEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-CC-CEEEEEECCCHHHHHHHHHHcC
Confidence 3678888888 88999999999999988776 33 4677788776555556777776
No 400
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=94.56 E-value=0.061 Score=48.26 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=49.9
Q ss_pred hHHHHHHHHhccCCceEEEEEccc-------------------------cccHhHHhhcCCCCCCEEEEEcCCCCCceee
Q 005374 293 SPFVRQISRNYWAYASFAFVLWRE-------------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVY 347 (699)
Q Consensus 293 ~~~~~~~A~~~~~~~~Fg~V~~~~-------------------------~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y 347 (699)
.+.+..++..|.+.+.|..|.... .....+++.|+|...|+++++..++.....+
T Consensus 48 ~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 127 (148)
T 2b5x_A 48 MPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQ 127 (148)
T ss_dssp HHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEE
T ss_pred hHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEe
Confidence 455555666777667887776432 1235799999999999999996555433345
Q ss_pred cCCCChhHHHHHHHHh
Q 005374 348 YGSFNNSRLSEVMEQN 363 (699)
Q Consensus 348 ~g~~~~~~L~~fi~~~ 363 (699)
.|..+.+.|.++|+..
T Consensus 128 ~g~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 128 AGGSGMKMLEKRVNRV 143 (148)
T ss_dssp ESCSTTHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH
Confidence 7877888888888754
No 401
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.52 E-value=0.072 Score=51.45 Aligned_cols=96 Identities=19% Similarity=0.185 Sum_probs=62.7
Q ss_pred cCCCcEEEEEeccCCCCCCCcch-HH--HHHHHHhhcccceeeeeccchhh------------hhHHHH---hCCCCccc
Q 005374 151 HDSKPWLIQVYSDGSYLCGQFSG-AW--KTIAALLEGIANTGMVELGDIRL------------ATHLAE---RKPIGQIF 212 (699)
Q Consensus 151 ~~~~~~lV~FYapwC~hCk~l~p-~~--~~~A~~L~g~~~va~Vdc~~~~~------------~~~L~~---k~~i~~~f 212 (699)
...++.+|.+++|||..|..+.- .| +++.+.++....+-..|.+.... ...++. .++
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~----- 127 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQK----- 127 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSC-----
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcC-----
Confidence 36889999999999999887752 22 34556666555566777663321 012333 355
Q ss_pred ccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 213 ~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
+.+||++.++..............|..+++.+++.+...
T Consensus 128 -~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 128 -TDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp -STTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred -CCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 779999999854321111234568999999999888765
No 402
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=94.50 E-value=0.012 Score=65.35 Aligned_cols=89 Identities=9% Similarity=0.076 Sum_probs=57.6
Q ss_pred cccchhhhhhhhhcCCCcEEEE-EEcCC---CCCchHHHHHHHHhccC--------CceEEEEEccccccHhHHhhcCCC
Q 005374 262 YTKESMGKNFLAKTGPHKVKVI-FFSKT---GERASPFVRQISRNYWA--------YASFAFVLWREEESSIWWNTFEVE 329 (699)
Q Consensus 262 it~~~~~~~Fl~~~~~~~v~vl-~f~~~---~~~~~~~~~~~A~~~~~--------~~~Fg~V~~~~~~s~~l~~kf~V~ 329 (699)
++..+ ++..+.... .++.+| |+.+- |....|.+..++..|.+ .+.|+.|.... ..+++++|+|.
T Consensus 28 Lt~~~-F~~~l~~~~-~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~--~~~la~~y~V~ 103 (470)
T 3qcp_A 28 LSGDD-FSRVHRVAP-LCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS--EVDLCRKYDIN 103 (470)
T ss_dssp CSCSC-GGGTCTTGG-GSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT--CHHHHHHTTCC
T ss_pred CCHHH-HHHHHHhCC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC--CHHHHHHcCCC
Confidence 45444 566554322 234455 44432 33456788888888862 47888887543 47899999999
Q ss_pred CCCEEEEEcCCC-CCceeecCCCChh
Q 005374 330 SAPAIVFLKDPG-VKPVVYYGSFNNS 354 (699)
Q Consensus 330 ~~PtIvlfk~~~-~~pv~y~g~~~~~ 354 (699)
++||+++|++++ ..+..|.|..+.+
T Consensus 104 ~~PTlilf~~gg~~~~~~y~G~r~~e 129 (470)
T 3qcp_A 104 FVPRLFFFYPRDSCRSNEECGTSSLE 129 (470)
T ss_dssp SSCEEEEEEESSCCCTTSCCCCCCEE
T ss_pred ccCeEEEEECCCceEEEEeeCCCCHH
Confidence 999999997654 3455566665443
No 403
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=94.49 E-value=0.069 Score=47.25 Aligned_cols=69 Identities=19% Similarity=0.342 Sum_probs=50.0
Q ss_pred hHHHHHHHHhccCCceEEEEEcccc--------------------ccHhHHhhcCCCCCCEEEEEcCCCCCceeec---C
Q 005374 293 SPFVRQISRNYWAYASFAFVLWREE--------------------ESSIWWNTFEVESAPAIVFLKDPGVKPVVYY---G 349 (699)
Q Consensus 293 ~~~~~~~A~~~~~~~~Fg~V~~~~~--------------------~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~---g 349 (699)
.+.+..++.++. .+.|..|..... ....+++.|++.+.|+++++..++... .+. |
T Consensus 43 ~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g 120 (136)
T 1lu4_A 43 APSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTA 120 (136)
T ss_dssp HHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSS
T ss_pred HHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCC
Confidence 455555666676 777887765431 135688999999999999996655443 567 8
Q ss_pred CCChhHHHHHHHHh
Q 005374 350 SFNNSRLSEVMEQN 363 (699)
Q Consensus 350 ~~~~~~L~~fi~~~ 363 (699)
..+.+.|.++|++.
T Consensus 121 ~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 121 AMSQDELSGRVAAL 134 (136)
T ss_dssp CCCHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHH
Confidence 88889999988753
No 404
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.17 E-value=0.29 Score=54.92 Aligned_cols=174 Identities=14% Similarity=0.060 Sum_probs=99.1
Q ss_pred CcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEEcCCCCCCCCcc
Q 005374 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (699)
Q Consensus 154 ~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~ 233 (699)
.++-+.++.+-|..|..+....+++|. |.+.+.+-..+ ... . ..|++.+..+|.. ..
T Consensus 19 ~~v~l~~~~~~~~~~~~~~~~~~~~~~-~s~~i~~~~~~-----~~~------~--------~~p~~~~~~~~~~---~~ 75 (521)
T 1hyu_A 19 KPVELIATLDDSAKSAEIKELLAEIAE-LSDKVTFKEDN-----TLP------V--------RKPSFLITNPGSQ---QG 75 (521)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHHT-TCTTEEEEECT-----TSS------S--------CSSEEEEECTTCC---CS
T ss_pred CCEEEEEEeCCCcchHHHHHHHHHHHH-hCCceEEEEcC-----Ccc------c--------CCCEEEEecCCCc---ce
Confidence 455555666668777666655555543 33333331111 100 1 6799999987753 35
Q ss_pred ccccCCcCHHHHHHHHHHHh--ccCCcceecccchhhhhhhhhcCCCcEEEEEE-cCCC---CCchHHHHHHHHhccCCc
Q 005374 234 TRFEGELSVDAVTDWFATAI--LKLPRIFYYTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYA 307 (699)
Q Consensus 234 ~~Y~G~rs~~~Iv~fi~k~v--~~lP~~~~it~~~~~~~Fl~~~~~~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~ 307 (699)
..|.|--.=..+..|+...+ ...|.. ++ ++..+.. .... ..+.+.+| ...| ....+.+..+|..+. .+
T Consensus 76 i~f~g~p~g~e~~s~~~~l~~~~~~~~~--~~-~~~~~~i-~~~~-~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v 149 (521)
T 1hyu_A 76 PRFAGSPLGHEFTSLVLALLWTGGHPSK--EA-QSLLEQI-RDID-GDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RI 149 (521)
T ss_dssp CEEESCCCGGGHHHHHHHHHHHTTCCCC--SC-HHHHHHH-HHCC-SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TE
T ss_pred EEEeccCcchhHHHHHHHHHhhcCCCCC--CC-HHHHHHH-HhcC-CCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ce
Confidence 78877554445555554321 122221 22 2223333 2222 33445544 4333 223466666777764 78
Q ss_pred eEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 308 SFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 308 ~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
.|..+... +.++++++|+|.+.|++++ ++ +. +..|..+.+.|.+|+...
T Consensus 150 ~~~~vd~~--~~~~~~~~~~i~svPt~~i---~g-~~-~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 150 KHTAIDGG--TFQNEITERNVMGVPAVFV---NG-KE-FGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEEETT--TCHHHHHHTTCCSSSEEEE---TT-EE-EEESCCCHHHHHHHHCCS
T ss_pred EEEEEech--hhHHHHHHhCCCccCEEEE---CC-EE-EecCCCCHHHHHHHHhhc
Confidence 88777643 3578999999999999977 33 22 345888888999987654
No 405
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=93.99 E-value=0.2 Score=45.36 Aligned_cols=87 Identities=10% Similarity=0.152 Sum_probs=56.3
Q ss_pred CcEEEEEEc-C---CCCCchHHHHHHHHhccC-CceEEEEEccccc---------------------cHhHHhhcCCCCC
Q 005374 278 HKVKVIFFS-K---TGERASPFVRQISRNYWA-YASFAFVLWREEE---------------------SSIWWNTFEVESA 331 (699)
Q Consensus 278 ~~v~vl~f~-~---~~~~~~~~~~~~A~~~~~-~~~Fg~V~~~~~~---------------------s~~l~~kf~V~~~ 331 (699)
+++.+|.|. . .|....+.+..++..+.+ .+.|..|...... ...+.+.|+|...
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 109 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGI 109 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSS
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCC
Confidence 456566553 2 233345666667776765 3667666543321 1268899999999
Q ss_pred CEEEEEcCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 332 PAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 332 PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
|+++++...+.....+.|..+.+.|.++|+...
T Consensus 110 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 142 (152)
T 2lja_A 110 PRFILLDRDGKIISANMTRPSDPKTAEKFNELL 142 (152)
T ss_dssp CCEEEECTTSCEEESSCCCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCCeEEEccCCCCCHHHHHHHHHHHh
Confidence 999999865543333467778888999887653
No 406
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=93.91 E-value=0.022 Score=47.26 Aligned_cols=80 Identities=9% Similarity=-0.036 Sum_probs=46.3
Q ss_pred EEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchh-hhhHHHHhCCCCcccccccccEEEEcCCCCCCCCccc
Q 005374 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-LATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (699)
Q Consensus 156 ~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~-~~~~L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~ 234 (699)
-++.|++|||++|+++...+++.. -...+..||..++. ....+.+..+.. .|.+.++|+|.+ +|..
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~-~~~~~~vP~i~i--~g~~------ 71 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKV-IFPISTVPQIFI--DDEH------ 71 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCC-SSCCCSSCEEEE--TTEE------
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCC-CCCCCccCEEEE--CCEE------
Confidence 467888999999998776665432 11234445544331 123477777630 012379999865 5521
Q ss_pred cccCCcCHHHHHHHHHHH
Q 005374 235 RFEGELSVDAVTDWFATA 252 (699)
Q Consensus 235 ~Y~G~rs~~~Iv~fi~k~ 252 (699)
-| ..+.|.+++.+.
T Consensus 72 --i~--g~~~i~~~~~~~ 85 (89)
T 3msz_A 72 --IG--GFTELKANADKI 85 (89)
T ss_dssp --EE--SHHHHHHTHHHH
T ss_pred --Ee--ChHHHHHHHHHH
Confidence 22 356777776654
No 407
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=93.88 E-value=0.11 Score=41.51 Aligned_cols=70 Identities=10% Similarity=0.141 Sum_probs=48.1
Q ss_pred EEEEEcCC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCC-ChhHH
Q 005374 281 KVIFFSKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRL 356 (699)
Q Consensus 281 ~vl~f~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~-~~~~L 356 (699)
.|.|+.+. +....+.+..++.++...+.+..+. ..+++++|+|.+.|++++ ++ +.+ +.|.. +.+.|
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~---~G-~~~-~~G~~~~~~~l 72 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK-----EMDQILEAGLTALPGLAV---DG-ELK-IMGRVASKEEI 72 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC-----SHHHHHHHTCSSSSCEEE---TT-EEE-ECSSCCCHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec-----CHHHHHHCCCCcCCEEEE---CC-EEE-EcCCCCCHHHH
Confidence 34455432 3334566777888887677777764 467899999999999998 23 233 34876 78888
Q ss_pred HHHH
Q 005374 357 SEVM 360 (699)
Q Consensus 357 ~~fi 360 (699)
.+|+
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 7775
No 408
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=93.83 E-value=0.075 Score=47.72 Aligned_cols=64 Identities=14% Similarity=0.047 Sum_probs=47.2
Q ss_pred HHHhccCC-----ceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 299 ISRNYWAY-----ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 299 ~A~~~~~~-----~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
++..|... +.+..|.+......+++.+|+|.+.||+++|++ +++-....|.++.+.|..|++..
T Consensus 40 i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~-G~ev~Ri~G~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 40 IAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAG-DVESGRLEGYPGEDFFWPMLARL 108 (116)
T ss_dssp TTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEET-TEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEEC-CEEEeeecCCCCHHHHHHHHHHH
Confidence 44455544 677888766543467899999999999999994 44333458888999999998764
No 409
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=93.16 E-value=0.27 Score=44.54 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=35.2
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
..+++.|+|...|+++++..++.....+.|..+.+.|.++|+..
T Consensus 96 ~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 96 KAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp CHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56899999999999999966555444578888888888888764
No 410
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=93.16 E-value=0.13 Score=46.62 Aligned_cols=86 Identities=14% Similarity=0.186 Sum_probs=55.1
Q ss_pred CcEEEEEEc-CCC---CCchHHHHHHHHhccC-CceEEEEEccccc--------------------cHhHHhhcCCCCCC
Q 005374 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWA-YASFAFVLWREEE--------------------SSIWWNTFEVESAP 332 (699)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~-~~~Fg~V~~~~~~--------------------s~~l~~kf~V~~~P 332 (699)
+++.+|.|. ..| ....+.+..++..|.+ .+.|..|...... ...+++.|+|.+.|
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 105 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLP 105 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCC
Confidence 345565553 322 1223445556666654 4777777653321 23688999999999
Q ss_pred EEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 333 AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 333 tIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+++++...+.....+.|..+.+.|.++|+..
T Consensus 106 ~~~lid~~G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 106 TTFLINPEGKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp EEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 9999965554433467888888999988764
No 411
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=93.01 E-value=0.1 Score=52.53 Aligned_cols=42 Identities=5% Similarity=-0.157 Sum_probs=33.8
Q ss_pred CcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccc
Q 005374 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD 195 (699)
Q Consensus 154 ~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~ 195 (699)
+++++.|| +.||+.|..-.|.+.++.++++.. +.|..|.++.
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~ 73 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDN 73 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCC
Confidence 36778888 999999999999999999988654 3677777764
No 412
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=92.75 E-value=0.016 Score=52.85 Aligned_cols=69 Identities=12% Similarity=0.254 Sum_probs=42.7
Q ss_pred CCcccccCCCcEEEEEeccCCCCCCCc-chHHHHHHHHhhcccceeeeeccchh----hhhHHHHhCCCCcccccccccE
Q 005374 145 DFPSIFHDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPS 219 (699)
Q Consensus 145 nF~~~v~~~~~~lV~FYapwC~hCk~l-~p~~~~~A~~L~g~~~va~Vdc~~~~----~~~~L~~k~~i~~~f~V~gyPT 219 (699)
.+++.+...+ ++.|+++||++|+++ .+.+++... ..+.+..+|.+.+. ....|.+.+| +.++|+
T Consensus 29 ~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~---~~i~~~~vdvd~~~~~~~~~~~L~~~~g------~~tVP~ 97 (129)
T 3ctg_A 29 HVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNV---PKSKALVLELDEMSNGSEIQDALEEISG------QKTVPN 97 (129)
T ss_dssp HHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSCE
T ss_pred HHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCc---cCCCcEEEEccccCCHHHHHHHHHHHhC------CCCCCE
Confidence 3445554443 678999999999987 665554321 01356666766432 1234777777 569999
Q ss_pred EEEcCCC
Q 005374 220 LVAFPPG 226 (699)
Q Consensus 220 l~~f~~g 226 (699)
| |.+|
T Consensus 98 v--fi~g 102 (129)
T 3ctg_A 98 V--YING 102 (129)
T ss_dssp E--EETT
T ss_pred E--EECC
Confidence 6 4455
No 413
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=92.65 E-value=0.25 Score=43.17 Aligned_cols=43 Identities=16% Similarity=0.267 Sum_probs=34.4
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
..+.+.|++.+.|+++++..++.....+.|..+.+.|.++|++
T Consensus 94 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 94 GKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred hHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 4689999999999999996656544456888888889888865
No 414
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=92.34 E-value=0.27 Score=44.66 Aligned_cols=45 Identities=16% Similarity=0.152 Sum_probs=35.7
Q ss_pred HhHHhhcC--CCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 320 SIWWNTFE--VESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 320 ~~l~~kf~--V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
..+++.|+ +...|+++++...+.....+.|..+.+.|.++|+.-.
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~ 139 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAH 139 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 56888999 8899999999766655445788889999999987643
No 415
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=92.22 E-value=0.47 Score=42.33 Aligned_cols=82 Identities=11% Similarity=0.196 Sum_probs=51.2
Q ss_pred CcEEEEEE-c---CCCCCchHHHHHHHHhc-cCC-ceEEEEEccccc-----------------------cHhHHhhcCC
Q 005374 278 HKVKVIFF-S---KTGERASPFVRQISRNY-WAY-ASFAFVLWREEE-----------------------SSIWWNTFEV 328 (699)
Q Consensus 278 ~~v~vl~f-~---~~~~~~~~~~~~~A~~~-~~~-~~Fg~V~~~~~~-----------------------s~~l~~kf~V 328 (699)
+++.+|.| . ..|....+.+..++.+| .+. +.|..|...... ...+++.|+|
T Consensus 33 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 112 (148)
T 3fkf_A 33 NRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAI 112 (148)
T ss_dssp TSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC
T ss_pred CcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCC
Confidence 34656554 2 23333456666677777 544 677777654322 3478999999
Q ss_pred CCCCEEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 329 ESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 329 ~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
.+.|+++++..++. +.+... +.+.|.++|+.
T Consensus 113 ~~~P~~~lid~~G~--i~~~~~-~~~~l~~~l~~ 143 (148)
T 3fkf_A 113 LTLPTNILLSPTGK--ILARDI-QGEALTGKLKE 143 (148)
T ss_dssp CSSSEEEEECTTSB--EEEESC-CHHHHHHHHHH
T ss_pred CCcCEEEEECCCCe--EEEecC-CHHHHHHHHHH
Confidence 99999999955443 333222 66777777765
No 416
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=91.87 E-value=0.65 Score=41.37 Aligned_cols=79 Identities=14% Similarity=0.162 Sum_probs=49.6
Q ss_pred CcEEEEEE----cCCCCCchHHHHHHHHhccCC-ceEEEEEccccccHh-------------------------HHhhcC
Q 005374 278 HKVKVIFF----SKTGERASPFVRQISRNYWAY-ASFAFVLWREEESSI-------------------------WWNTFE 327 (699)
Q Consensus 278 ~~v~vl~f----~~~~~~~~~~~~~~A~~~~~~-~~Fg~V~~~~~~s~~-------------------------l~~kf~ 327 (699)
+++.+|.| +..|....+.+..+...|.+. +.|..|.... ..+ +++.|+
T Consensus 31 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 31 AKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER--KDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS--SSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC--CHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 45666655 234555667777777777665 7777776542 223 899999
Q ss_pred CCCCCEEEEEcCCCCCceeecCCCChhHHHHHHH
Q 005374 328 VESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (699)
Q Consensus 328 V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~ 361 (699)
|.+.|+++++..++.....+.|. ..+.++++
T Consensus 109 i~~~P~~~lid~~G~i~~~~~g~---~~~~~~l~ 139 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIAKRIGY---ENLDDFLV 139 (148)
T ss_dssp CCSSCEEEEECTTCBEEEESCCG---GGHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEecCCH---HHHHHHHH
Confidence 99999999996555432233444 34444443
No 417
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=91.66 E-value=0.039 Score=53.63 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=33.6
Q ss_pred CCcEEEEEeccCCCCCCCcchHH---HHHHHHhhcccceeeeecc
Q 005374 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELG 194 (699)
Q Consensus 153 ~~~~lV~FYapwC~hCk~l~p~~---~~~A~~L~g~~~va~Vdc~ 194 (699)
.++.+|+|++.||+||+++.|.+ .++.+.+.+.++|..++..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 47899999999999999999986 6888888655566555543
No 418
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=91.11 E-value=0.35 Score=44.64 Aligned_cols=64 Identities=11% Similarity=0.111 Sum_probs=42.9
Q ss_pred HHHhccCCceEEEEEccccc---------cHhHHhhcCCCCCCEEEEEcCCCCCceeecCCC--ChhHHHHHHHHh
Q 005374 299 ISRNYWAYASFAFVLWREEE---------SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQN 363 (699)
Q Consensus 299 ~A~~~~~~~~Fg~V~~~~~~---------s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~--~~~~L~~fi~~~ 363 (699)
++..+...+.+..|...... ...++++|+|.+.|+++++..+++....+ |.. +.+.|.++|+..
T Consensus 76 ~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 76 FKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp HHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHH
T ss_pred HHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHH
Confidence 33333345677777654321 24799999999999999995555443345 777 777888888753
No 419
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=91.10 E-value=0.086 Score=46.62 Aligned_cols=65 Identities=11% Similarity=0.206 Sum_probs=39.8
Q ss_pred CcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccc--h-hhh-hHHHHhCCCCcccccccccEEE
Q 005374 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD--I-RLA-THLAERKPIGQIFFRRGLPSLV 221 (699)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~--~-~~~-~~L~~k~~i~~~f~V~gyPTl~ 221 (699)
+++.+++++ ++.|.+|||++|++..+.+++. + +.+..+|.+. + ... ..|.+..| ..++|++.
T Consensus 10 ~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~-----~-i~~~~~dvd~~~~~~~~~~~l~~~~g------~~tvP~vf 75 (114)
T 3h8q_A 10 LVGLIERSR--VVIFSKSYCPHSTRVKELFSSL-----G-VECNVLELDQVDDGARVQEVLSEITN------QKTVPNIF 75 (114)
T ss_dssp HHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEETTTSTTHHHHHHHHHHHHS------CCSSCEEE
T ss_pred HHHHhccCC--EEEEEcCCCCcHHHHHHHHHHc-----C-CCcEEEEecCCCChHHHHHHHHHHhC------CCccCEEE
Confidence 344454444 4459999999998887766654 2 2456666663 1 111 22555556 55999986
Q ss_pred EcCCC
Q 005374 222 AFPPG 226 (699)
Q Consensus 222 ~f~~g 226 (699)
+ +|
T Consensus 76 i--~g 78 (114)
T 3h8q_A 76 V--NK 78 (114)
T ss_dssp E--TT
T ss_pred E--CC
Confidence 5 55
No 420
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=90.99 E-value=0.41 Score=43.76 Aligned_cols=84 Identities=12% Similarity=0.171 Sum_probs=51.9
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCC-ceEEEEEccccccHhHHhhc--------------------------
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTF-------------------------- 326 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~-~~Fg~V~~~~~~s~~l~~kf-------------------------- 326 (699)
+++.+|.| ...| ....+.+..++..|.+. +.|..|.... ....+++|
T Consensus 34 gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3or5_A 34 GKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE--QLPNVKNYMKTQGIIYPVMMATPELIRAFNGYID 111 (165)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC--CHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTST
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC--CHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhc
Confidence 34556555 3322 22345555566667654 6666665433 23344444
Q ss_pred -CCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 327 -EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 327 -~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
++...|+++++..++.....+.|..+.+.|.++|+..
T Consensus 112 ~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 112 GGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp TCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred cCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 8889999999966554434467888888898888764
No 421
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=90.79 E-value=0.27 Score=44.59 Aligned_cols=48 Identities=13% Similarity=0.120 Sum_probs=38.0
Q ss_pred cHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHhhcc
Q 005374 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (699)
Q Consensus 319 s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~~~~ 366 (699)
...+++.|+|...|+++++...+.....+.|..+.+.|.++|+++.-.
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 98 PHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp HHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred hHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 467899999999999999965554444468888999999999876544
No 422
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=90.49 E-value=0.59 Score=42.10 Aligned_cols=74 Identities=14% Similarity=0.103 Sum_probs=46.7
Q ss_pred hHHHHHHHHhccCC-ceEEEEEccccc--------------------cHhHHhhcCCCCCCEEEEEcCCCCCceeecCCC
Q 005374 293 SPFVRQISRNYWAY-ASFAFVLWREEE--------------------SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF 351 (699)
Q Consensus 293 ~~~~~~~A~~~~~~-~~Fg~V~~~~~~--------------------s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~ 351 (699)
.+.+..++..|.+. +.|..|...... ...+++.|+|.+.|+++++...+.....+.|..
T Consensus 47 ~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~ 126 (152)
T 3gl3_A 47 FPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFR 126 (152)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCC
Confidence 34455566666654 666666544221 115788899999999999965554333345643
Q ss_pred --ChhHHHHHHHHhhcc
Q 005374 352 --NNSRLSEVMEQNKLQ 366 (699)
Q Consensus 352 --~~~~L~~fi~~~~~~ 366 (699)
+.+.|.++|++..-.
T Consensus 127 ~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 127 PADKEALEQQILAALGG 143 (152)
T ss_dssp TTTHHHHHHHHHHHTC-
T ss_pred CcCHHHHHHHHHHHHcc
Confidence 447899999876544
No 423
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=90.29 E-value=0.87 Score=42.83 Aligned_cols=43 Identities=7% Similarity=0.199 Sum_probs=33.3
Q ss_pred CCCcEEEEEeccCCC-CCCCcchHHHHHHHHhhcc---cceeeeecc
Q 005374 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEGI---ANTGMVELG 194 (699)
Q Consensus 152 ~~~~~lV~FYapwC~-hCk~l~p~~~~~A~~L~g~---~~va~Vdc~ 194 (699)
.++++||.|+..||+ .|....+.+.++.+.++.. +.+..|.++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 578999999999996 6999899999888887543 345555554
No 424
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=89.99 E-value=0.55 Score=42.71 Aligned_cols=42 Identities=17% Similarity=0.323 Sum_probs=33.7
Q ss_pred HHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 322 l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+.+.|+|.+.|+++++...+.....+.|..+.+.|.++|+..
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 153 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSL 153 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHH
Confidence 899999999999999976665444467888888888888753
No 425
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=88.84 E-value=0.3 Score=48.52 Aligned_cols=50 Identities=10% Similarity=0.015 Sum_probs=37.2
Q ss_pred cEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccchhhhhHHHH
Q 005374 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAE 204 (699)
Q Consensus 155 ~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~~~~~~L~~ 204 (699)
++|+.|.+.||+.|..-.|.+.+++++++.. +.|..|.++....+...++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~ 84 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSK 84 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 5566667999999999999999999999764 3788888875433333333
No 426
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=88.30 E-value=0.86 Score=41.37 Aligned_cols=43 Identities=9% Similarity=0.242 Sum_probs=33.7
Q ss_pred hHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 321 ~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
.+++.|+|...|+++++...+.....+.|..+.+.|.++|+.-
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATL 150 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 5899999999999999966554444467888888888888653
No 427
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=88.29 E-value=1.2 Score=40.32 Aligned_cols=68 Identities=13% Similarity=0.180 Sum_probs=42.9
Q ss_pred hHHHHHHHHhccCC-ceEEEEEccccc-----------------------cHhHHhhcCCCCCCEEEEEcCCCCCceeec
Q 005374 293 SPFVRQISRNYWAY-ASFAFVLWREEE-----------------------SSIWWNTFEVESAPAIVFLKDPGVKPVVYY 348 (699)
Q Consensus 293 ~~~~~~~A~~~~~~-~~Fg~V~~~~~~-----------------------s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~ 348 (699)
.+.+..++..|.+. +.|..|...... ...+++.|+|...|+++++..++. +++.
T Consensus 48 ~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~ 125 (152)
T 2lrn_A 48 TPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGK--IVAK 125 (152)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSE--EEEE
T ss_pred HHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCe--EEEe
Confidence 44555566666654 667666544311 356889999999999999955443 2222
Q ss_pred CCCChhHHHHHHHHh
Q 005374 349 GSFNNSRLSEVMEQN 363 (699)
Q Consensus 349 g~~~~~~L~~fi~~~ 363 (699)
..+.+.|.++|+.-
T Consensus 126 -~~~~~~l~~~l~~l 139 (152)
T 2lrn_A 126 -ELRGDDLYNTVEKF 139 (152)
T ss_dssp -CCCTTHHHHHHHHH
T ss_pred -eCCHHHHHHHHHHH
Confidence 13556777777654
No 428
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=88.18 E-value=0.64 Score=42.48 Aligned_cols=44 Identities=11% Similarity=0.207 Sum_probs=35.2
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
..+++.|+|...|+++++..++.....+.|..+.+.|.++|+..
T Consensus 111 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 111 GTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred hHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56899999999999999965554444467888899999998764
No 429
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=88.14 E-value=0.15 Score=48.03 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=30.9
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHHHHHhhccccee
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTG 189 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va 189 (699)
+..+.+|+|++-.|+||+++.|.+.++.+.+...+++.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~ 57 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQ 57 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEE
Confidence 46789999999999999999999988887765444443
No 430
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=87.29 E-value=0.71 Score=40.64 Aligned_cols=61 Identities=5% Similarity=0.141 Sum_probs=44.5
Q ss_pred chHHHHHHHHhccCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHH
Q 005374 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (699)
Q Consensus 292 ~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi 360 (699)
..+.+..++.++. +.|..|.+.. .++++.+|++. .|+|++|.++. . +..|.++.+.|.+||
T Consensus 46 a~~~L~~l~~e~~--i~~~~vDId~--d~~l~~~ygv~-VP~l~~~~dG~--~-v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 46 MIASLRVLQKKSW--FELEVINIDG--NEHLTRLYNDR-VPVLFAVNEDK--E-LCHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHHHSC--CCCEEEETTT--CHHHHHHSTTS-CSEEEETTTTE--E-EECSSCCCHHHHHHH
T ss_pred HHHHHHHHHHhcC--CeEEEEECCC--CHHHHHHhCCC-CceEEEEECCE--E-EEecCCCHHHHHHHh
Confidence 4455666666553 7788887543 46799999997 99999998643 2 346788999998887
No 431
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=87.19 E-value=0.41 Score=47.90 Aligned_cols=52 Identities=6% Similarity=-0.071 Sum_probs=36.9
Q ss_pred CCCcEEEEEeccC-CCCCC-----CcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCC
Q 005374 152 DSKPWLIQVYSDG-SYLCG-----QFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 152 ~~~~~lV~FYapw-C~hCk-----~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~ 207 (699)
.+++++|.||..| |+.|. .-.+.+.+. +.| +.|..|+++........+++++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~g-v~VvgIS~Ds~~~~~~f~~~~g 104 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WPH-LKLIVITVDSPSSLARARHEHG 104 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CTT-SEEEEEESSCHHHHHHHHHHHC
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cCC-CEEEEEECCCHHHHHHHHHHcC
Confidence 4678899999888 99999 666666665 444 3677777775445555777765
No 432
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=86.95 E-value=1.1 Score=40.83 Aligned_cols=89 Identities=8% Similarity=0.131 Sum_probs=52.6
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhcc-CCceEEEEEccc-----------------cccHhHHhhcCCCCCCEEE
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYW-AYASFAFVLWRE-----------------EESSIWWNTFEVESAPAIV 335 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~-~~~~Fg~V~~~~-----------------~~s~~l~~kf~V~~~PtIv 335 (699)
+++.+|.| ...| ....+.+..++.+|. ..+.|..|.... .....+.+.|+|.+.|+++
T Consensus 41 gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~ 120 (158)
T 3hdc_A 41 GKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTF 120 (158)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEE
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEE
Confidence 34656655 3322 123345556677775 456666665433 1135799999999999998
Q ss_pred EEcCCCCCceeecCCC--ChhHHHHHHHHhhcc
Q 005374 336 FLKDPGVKPVVYYGSF--NNSRLSEVMEQNKLQ 366 (699)
Q Consensus 336 lfk~~~~~pv~y~g~~--~~~~L~~fi~~~~~~ 366 (699)
++...+.....+.|.. +...+.+.++.+..+
T Consensus 121 lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 121 IVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred EEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 8866554433456654 445677777666554
No 433
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=86.64 E-value=1.5 Score=40.11 Aligned_cols=41 Identities=24% Similarity=0.341 Sum_probs=31.6
Q ss_pred hHHhhcCCCCCCEEEEEcCCCCCceeecCCC-ChhHHHHHHHHh
Q 005374 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVMEQN 363 (699)
Q Consensus 321 ~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~-~~~~L~~fi~~~ 363 (699)
.+.+.|+|...|+++++...+. +.+.|.. +.+.|.++|+..
T Consensus 121 ~~~~~~~v~~~P~~~lid~~G~--i~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 121 SLVEKFNVRSIDYIVIMDKSSN--VLYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTCC--EEEEEESCCHHHHHHHHHHC
T ss_pred HHHHHhCCCCceEEEEEcCCCc--EEEeCCCCCHHHHHHHHHHH
Confidence 6889999999999999965553 2336777 788888888653
No 434
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=86.59 E-value=0.19 Score=45.77 Aligned_cols=66 Identities=14% Similarity=0.123 Sum_probs=38.9
Q ss_pred CCcccccCCCcEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccch---hh-hhHHHHhCCCCcccccccccE
Q 005374 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPS 219 (699)
Q Consensus 145 nF~~~v~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~---~~-~~~L~~k~~i~~~f~V~gyPT 219 (699)
+|+++++.+. +|.|..+||++|++....+++. ... +.+..||.+.. .. ...|.+..| ...+|+
T Consensus 6 ~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~----~~~~v~~~~idid~~~d~~~~~~~l~~~~G------~~tVP~ 73 (127)
T 3l4n_A 6 EYSLILDLSP--IIIFSKSTCSYSKGMKELLENE----YQFIPNYYIIELDKHGHGEELQEYIKLVTG------RGTVPN 73 (127)
T ss_dssp HHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHH----EEEESCCEEEEGGGSTTHHHHHHHHHHHHS------CCSSCE
T ss_pred HHHHHHccCC--EEEEEcCCCccHHHHHHHHHHh----cccCCCcEEEEecCCCCHHHHHHHHHHHcC------CCCcce
Confidence 3555555444 7889999999998877666552 111 24555666532 11 222444445 458999
Q ss_pred EEE
Q 005374 220 LVA 222 (699)
Q Consensus 220 l~~ 222 (699)
|.+
T Consensus 74 IfI 76 (127)
T 3l4n_A 74 LLV 76 (127)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
No 435
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=86.22 E-value=0.43 Score=44.54 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=30.9
Q ss_pred HhhcCCCCCCEEEEEcCCCCCceeecCCCC-hhHHHHHHHH
Q 005374 323 WNTFEVESAPAIVFLKDPGVKPVVYYGSFN-NSRLSEVMEQ 362 (699)
Q Consensus 323 ~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~-~~~L~~fi~~ 362 (699)
.++|+|.+.|+++++...++....+.|..+ .+.|.++|++
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 789999999999999555544334578887 8888888765
No 436
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=86.21 E-value=3.4 Score=38.48 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=37.3
Q ss_pred CCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCC-CCCceeecCCCChhHHHHHHHH
Q 005374 305 AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 305 ~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~-~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
+.+.+..+...+.+...+.++|++.++|+++++... +..-....| ++.+.+.++|+.
T Consensus 76 ~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 76 EHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp HTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred cCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 345556665543334678999999999999999765 433223445 777776665543
No 437
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=86.21 E-value=0.64 Score=42.00 Aligned_cols=44 Identities=14% Similarity=0.111 Sum_probs=32.4
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
..+++.|+|...|+++++..++.....+.|..+.+.|.++|+..
T Consensus 107 ~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 107 GRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp SHHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHH
T ss_pred hHHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 46888999999998887755454333467888888888887653
No 438
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=85.63 E-value=1.2 Score=39.99 Aligned_cols=70 Identities=10% Similarity=0.111 Sum_probs=43.7
Q ss_pred hHHHHHHHHhccC-CceEEEEEcccc---------------------ccHhHHhhcCCCCCCEEEEEcCCCCCceeecCC
Q 005374 293 SPFVRQISRNYWA-YASFAFVLWREE---------------------ESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS 350 (699)
Q Consensus 293 ~~~~~~~A~~~~~-~~~Fg~V~~~~~---------------------~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~ 350 (699)
.+.+..++..|.+ .+.|..|..... ....+++.|+|.+.|+++++...+.....+.|.
T Consensus 47 ~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~ 126 (154)
T 3kcm_A 47 IPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGA 126 (154)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESC
T ss_pred HHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCC
Confidence 3444556666655 466666654432 012388899999999888886555433334565
Q ss_pred C--ChhHHHHHHHH
Q 005374 351 F--NNSRLSEVMEQ 362 (699)
Q Consensus 351 ~--~~~~L~~fi~~ 362 (699)
. +...+.++|++
T Consensus 127 ~~~~~~~l~~~l~~ 140 (154)
T 3kcm_A 127 MEWDHPEVIAFLNN 140 (154)
T ss_dssp CCTTSHHHHHHHHT
T ss_pred CccccHHHHHHHHH
Confidence 4 55678888765
No 439
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=85.34 E-value=1.6 Score=40.95 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=50.5
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCC-c------eEEEEEccccccHhHHhhc--------------------
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAY-A------SFAFVLWREEESSIWWNTF-------------------- 326 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~-~------~Fg~V~~~~~~s~~l~~kf-------------------- 326 (699)
+++.+|.| ...| ....+.+..++.+|.+. + .|..|..... +.+.+++|
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY-SRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC-CHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC-CHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 35656655 3322 22345555666677655 6 7777765431 22333333
Q ss_pred -----CCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 327 -----EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 327 -----~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
++...|+++++...+.....+.|..+.+.|.++|+..
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPL 179 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 5778998888866555444467888888888888653
No 440
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=84.62 E-value=0.34 Score=46.04 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=31.8
Q ss_pred CCCcEEEEEeccCCCCCCCcchHH-HHHHHHhhcccceeeee
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALLEGIANTGMVE 192 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~-~~~A~~L~g~~~va~Vd 192 (699)
+.++.+|+||+++|++|..+.+.. .++++.+.+.+++--+.
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~ 57 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFH 57 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEE
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEe
Confidence 456789999999999999999988 88887775544444443
No 441
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=84.48 E-value=0.41 Score=47.42 Aligned_cols=42 Identities=7% Similarity=-0.072 Sum_probs=33.3
Q ss_pred cEEEEEeccCCCCCCCcchHHHHHHHHhhcc-cceeeeeccch
Q 005374 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI 196 (699)
Q Consensus 155 ~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~-~~va~Vdc~~~ 196 (699)
++|+.|.++||+.|..-.|.+.++.++++.. +.|..|.++..
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~ 76 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSK 76 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCH
Confidence 4444557999999999999999999999764 37888888743
No 442
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=84.45 E-value=2.6 Score=37.94 Aligned_cols=67 Identities=15% Similarity=0.229 Sum_probs=41.3
Q ss_pred hHHHHHHHHhc-cCC-ceEEEEEccccc-----------------------cHhHHhhcCCCCCCEEEEEcCCCCCceee
Q 005374 293 SPFVRQISRNY-WAY-ASFAFVLWREEE-----------------------SSIWWNTFEVESAPAIVFLKDPGVKPVVY 347 (699)
Q Consensus 293 ~~~~~~~A~~~-~~~-~~Fg~V~~~~~~-----------------------s~~l~~kf~V~~~PtIvlfk~~~~~pv~y 347 (699)
.+.+..+..+| .+. +.|..|...... ...+.+.|+|...|+++++...+. +.+
T Consensus 54 ~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~ 131 (150)
T 3fw2_A 54 NSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGK--ILA 131 (150)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSB--EEE
T ss_pred HHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCE--EEE
Confidence 44555566666 443 666666544321 236899999999999999965443 233
Q ss_pred cCCCChhHHHHHHHH
Q 005374 348 YGSFNNSRLSEVMEQ 362 (699)
Q Consensus 348 ~g~~~~~~L~~fi~~ 362 (699)
.. .+.+.|.+.|+.
T Consensus 132 ~~-~~~~~l~~~l~~ 145 (150)
T 3fw2_A 132 KN-LRGEELKKKIEN 145 (150)
T ss_dssp ES-CCHHHHHHHHHH
T ss_pred cc-CCHHHHHHHHHH
Confidence 22 366667766654
No 443
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=83.74 E-value=0.44 Score=41.48 Aligned_cols=38 Identities=16% Similarity=0.123 Sum_probs=30.7
Q ss_pred cHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 319 s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
..+++++|+|.++||+++ ++. .+.|..+.+.|.+|+.-
T Consensus 55 ~~~l~~~~~V~~~PT~~i---~G~---~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 55 QAQECTEAGITSYPTWII---NGR---TYTGVRSLEALAVASGY 92 (106)
T ss_dssp CCHHHHHTTCCSSSEEEE---TTE---EEESCCCHHHHHHHHTC
T ss_pred hHHHHHHcCCeEeCEEEE---CCE---EecCCCCHHHHHHHhCC
Confidence 467999999999999777 232 37899999999999743
No 444
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=82.82 E-value=0.47 Score=43.54 Aligned_cols=50 Identities=16% Similarity=0.094 Sum_probs=31.2
Q ss_pred cCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhh-HHHHhCCCCcccccccccEEEEcCCC
Q 005374 163 DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERKPIGQIFFRRGLPSLVAFPPG 226 (699)
Q Consensus 163 pwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~-~L~~k~~i~~~f~V~gyPTl~~f~~g 226 (699)
|||++|++....+.+. + +.+..||.++++... .|.+..+ ...+|.|+ .+|
T Consensus 48 ~~Cp~C~~ak~~L~~~-----g-v~y~~vdI~~d~~~~~~L~~~~G------~~tvP~Vf--I~G 98 (135)
T 2wci_A 48 PSCGFSAQAVQALAAC-----G-ERFAYVDILQNPDIRAELPKYAN------WPTFPQLW--VDG 98 (135)
T ss_dssp BSSHHHHHHHHHHHTT-----C-SCCEEEEGGGCHHHHHHHHHHHT------CCSSCEEE--ETT
T ss_pred CCCccHHHHHHHHHHc-----C-CceEEEECCCCHHHHHHHHHHHC------CCCcCEEE--ECC
Confidence 9999998776655433 2 367788887554322 2444445 45888864 455
No 445
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=82.75 E-value=1.5 Score=45.06 Aligned_cols=82 Identities=12% Similarity=0.065 Sum_probs=48.6
Q ss_pred cEEEEEeccCCCCCCCcchHHHHHHHHhhccc--cee--eee--ccc--------hhhhhHHHHhCCCCcccccccc--c
Q 005374 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA--NTG--MVE--LGD--------IRLATHLAERKPIGQIFFRRGL--P 218 (699)
Q Consensus 155 ~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~--~va--~Vd--c~~--------~~~~~~L~~k~~i~~~f~V~gy--P 218 (699)
..+..|.+++|++|.+....+++.+.... .+ .+- .+| ... ......+++++| ++++ |
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~-vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G------~~tVyTP 116 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGD-VVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALG------RNGVYTP 116 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTS-SEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTT------CSCCCSS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCC-eeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhC------CCcccCC
Confidence 56667889999999998888888876532 21 111 222 000 011223677777 5588 9
Q ss_pred EEEEcCCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 219 Tl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.|++ +|.. .-|..+.+.|.+.+.+.
T Consensus 117 qI~I--ng~~-------~v~G~d~~~l~~~l~~~ 141 (270)
T 2axo_A 117 QAIL--NGRD-------HVKGADVRGIYDRLDAF 141 (270)
T ss_dssp EEEE--TTTE-------EEETTCHHHHHHHHHHH
T ss_pred EEEE--CCEE-------eecCCCHHHHHHHHHHh
Confidence 9776 5531 12334567777777654
No 446
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=82.29 E-value=0.67 Score=46.00 Aligned_cols=57 Identities=12% Similarity=0.146 Sum_probs=39.2
Q ss_pred CcEEEEEeccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCCcccccccccEEEE
Q 005374 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVA 222 (699)
Q Consensus 154 ~~~lV~FYapwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~~~f~V~gyPTl~~ 222 (699)
..-++.|..+||++|++....+++. + +.+-.+|.+++.....|.+.++ ..++|+|++
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-----~-i~~~~~~i~~~~~~~~l~~~~g------~~~vP~~~~ 225 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-----G-LSFEEIILGHDATIVSVRAVSG------RTTVPQVFI 225 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-----T-CCCEEEETTTTCCHHHHHHHTC------CSSSCEEEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-----C-CceEEEECCCchHHHHHHHHhC------CCCcCEEEE
Confidence 3457788999999999877665542 2 3566677765444345777777 559999864
No 447
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=81.94 E-value=1.2 Score=41.07 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=31.0
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
..+++.|+|...|+.+++..++.....+.|..+.+.|.++|+.
T Consensus 115 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 115 GMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp CHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHH
T ss_pred hHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 4688999999999777775545433345787888877777654
No 448
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.54 E-value=1.1 Score=39.36 Aligned_cols=55 Identities=5% Similarity=-0.066 Sum_probs=33.3
Q ss_pred EEEEEeccCCCCCC------CcchHHHHHHHHhhcccceeeeeccchhhhh-HHHHhC--------CCCcccccccccEE
Q 005374 156 WLIQVYSDGSYLCG------QFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERK--------PIGQIFFRRGLPSL 220 (699)
Q Consensus 156 ~lV~FYapwC~hCk------~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~-~L~~k~--------~i~~~f~V~gyPTl 220 (699)
-++.|+.+||++|+ +....+++. + +.+-.+|.+.++... .|.+.+ + ...+|.|
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~-----g-i~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g------~~tvP~v 76 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN-----K-IEFEEVDITMSEEQRQWMYKNVPPEKKPTQG------NPLPPQI 76 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT-----T-CCEEEEETTTCHHHHHHHHHSCCTTTCCSSS------SCCSCEE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc-----C-CCEEEEECCCCHHHHHHHHHHhcccccccCC------CCCCCEE
Confidence 46778899999998 444333221 1 367788887554332 244543 3 4578886
Q ss_pred EE
Q 005374 221 VA 222 (699)
Q Consensus 221 ~~ 222 (699)
++
T Consensus 77 fi 78 (111)
T 2ct6_A 77 FN 78 (111)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 449
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=81.39 E-value=1.5 Score=40.66 Aligned_cols=63 Identities=21% Similarity=0.301 Sum_probs=41.4
Q ss_pred CcEEEEEEc-CCC---CCchHHHHHHHHhccC--CceEEEEEcccccc----------------------HhHHhhcCCC
Q 005374 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWA--YASFAFVLWREEES----------------------SIWWNTFEVE 329 (699)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~~--~~~Fg~V~~~~~~s----------------------~~l~~kf~V~ 329 (699)
+++.+|.|. .-| ....+.+..++.+|.+ .+.+..|....... ..+++.|+|.
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC
Confidence 456666553 322 2234566667777765 56677776543211 5789999999
Q ss_pred CCCEEEEEcCC
Q 005374 330 SAPAIVFLKDP 340 (699)
Q Consensus 330 ~~PtIvlfk~~ 340 (699)
..|+++++...
T Consensus 128 ~~Pt~~lid~~ 138 (165)
T 3s9f_A 128 SIPTLIGLNAD 138 (165)
T ss_dssp SSSEEEEEETT
T ss_pred CCCEEEEEeCC
Confidence 99999999864
No 450
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=80.46 E-value=1.8 Score=38.79 Aligned_cols=64 Identities=25% Similarity=0.418 Sum_probs=41.4
Q ss_pred CcEEEEEEc-CCC---CCchHHHHHHHHhcc--CCceEEEEEccccc----------------------cHhHHhhcCCC
Q 005374 278 HKVKVIFFS-KTG---ERASPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVE 329 (699)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~--~~~~Fg~V~~~~~~----------------------s~~l~~kf~V~ 329 (699)
+++.+|.|. ..| ....+.+..++.+|. ..+.+..|...... ...+++.|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 456666553 322 223455666777776 36777777654321 24689999999
Q ss_pred CCCEEEEEc-CCC
Q 005374 330 SAPAIVFLK-DPG 341 (699)
Q Consensus 330 ~~PtIvlfk-~~~ 341 (699)
..|+++++. .++
T Consensus 108 ~~Pt~~lid~~~G 120 (146)
T 1o8x_A 108 SIPTLIGVDADSG 120 (146)
T ss_dssp SSSEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 999999997 444
No 451
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=79.96 E-value=1.7 Score=38.58 Aligned_cols=64 Identities=25% Similarity=0.409 Sum_probs=40.6
Q ss_pred CcEEEEEEc-CCC---CCchHHHHHHHHhcc--CCceEEEEEccccc----------------------cHhHHhhcCCC
Q 005374 278 HKVKVIFFS-KTG---ERASPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVE 329 (699)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~--~~~~Fg~V~~~~~~----------------------s~~l~~kf~V~ 329 (699)
+++.+|.|. ..| ....+.+..++.+|. ..+.+..|...... ...+++.|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCC
Confidence 446566553 322 223455666777776 45677777654321 24689999999
Q ss_pred CCCEEEEEc-CCC
Q 005374 330 SAPAIVFLK-DPG 341 (699)
Q Consensus 330 ~~PtIvlfk-~~~ 341 (699)
..|+++++. .++
T Consensus 108 ~~Pt~~lid~~~G 120 (144)
T 1o73_A 108 SIPTLITINADTG 120 (144)
T ss_dssp SSSEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 999999998 444
No 452
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=79.54 E-value=3 Score=39.11 Aligned_cols=70 Identities=11% Similarity=0.226 Sum_probs=44.5
Q ss_pred chHHHHHHHHhccCCceEEEEEccc---------------------------cccHhHHhhcCCCCCCEEEEEcCCCCCc
Q 005374 292 ASPFVRQISRNYWAYASFAFVLWRE---------------------------EESSIWWNTFEVESAPAIVFLKDPGVKP 344 (699)
Q Consensus 292 ~~~~~~~~A~~~~~~~~Fg~V~~~~---------------------------~~s~~l~~kf~V~~~PtIvlfk~~~~~p 344 (699)
..+.+..++.+|.+.+.|..|.... .....+.+.|+|...|+++++...+.
T Consensus 51 ~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~-- 128 (188)
T 2cvb_A 51 SIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLFDERRL-- 128 (188)
T ss_dssp THHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCB--
T ss_pred HHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCCeEEEECCCCc--
Confidence 3456666676776555555555421 11246888999999999999965443
Q ss_pred eeecCC----------CChhHHHHHHHHh
Q 005374 345 VVYYGS----------FNNSRLSEVMEQN 363 (699)
Q Consensus 345 v~y~g~----------~~~~~L~~fi~~~ 363 (699)
+++.|. .+.+.|.+.|+..
T Consensus 129 i~~~g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 129 LRYHGRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp EEEEECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred EEEEEecCCccccccccCHHHHHHHHHHH
Confidence 334333 3567788888764
No 453
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=79.20 E-value=1.9 Score=38.43 Aligned_cols=64 Identities=20% Similarity=0.319 Sum_probs=41.4
Q ss_pred CcEEEEEEc-CCC---CCchHHHHHHHHhcc--CCceEEEEEccccc----------------------cHhHHhhcCCC
Q 005374 278 HKVKVIFFS-KTG---ERASPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVE 329 (699)
Q Consensus 278 ~~v~vl~f~-~~~---~~~~~~~~~~A~~~~--~~~~Fg~V~~~~~~----------------------s~~l~~kf~V~ 329 (699)
+++.+|.|. ..| ....+.+..++.+|. ..+.+..|...... ...+++.|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 356666553 322 223456666777776 36777777654321 25689999999
Q ss_pred CCCEEEEEc-CCC
Q 005374 330 SAPAIVFLK-DPG 341 (699)
Q Consensus 330 ~~PtIvlfk-~~~ 341 (699)
..|+++++. .++
T Consensus 108 ~~P~~~lid~~~G 120 (144)
T 1i5g_A 108 SIPTLVGVEADSG 120 (144)
T ss_dssp SSSEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 999999997 444
No 454
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=79.17 E-value=1.2 Score=42.75 Aligned_cols=55 Identities=9% Similarity=0.023 Sum_probs=42.2
Q ss_pred CCcEEEEEeccCCCCCCC-cchHHHHHHHHhhcc-c-ceeeeeccchhhhhHHHHhCC
Q 005374 153 SKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 153 ~~~~lV~FYapwC~hCk~-l~p~~~~~A~~L~g~-~-~va~Vdc~~~~~~~~L~~k~~ 207 (699)
+.++|+.|.+.||+.|.. -.|.|.+.+.+++.. + .|..|.++........+++.+
T Consensus 48 k~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~ 105 (176)
T 4f82_A 48 KRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLH 105 (176)
T ss_dssp CEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhC
Confidence 335556666999999998 899999999999754 3 677788886555666788876
No 455
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=78.56 E-value=0.6 Score=43.68 Aligned_cols=85 Identities=13% Similarity=0.097 Sum_probs=45.5
Q ss_pred CcEEEEEE-cCCC---CCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcCC--CCCCEEEEEcCCCCCceeecCC-
Q 005374 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEV--ESAPAIVFLKDPGVKPVVYYGS- 350 (699)
Q Consensus 278 ~~v~vl~f-~~~~---~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~V--~~~PtIvlfk~~~~~pv~y~g~- 350 (699)
+++.+|.| .+-| ....|.+..++..+...+.|..|..... ...++..|++ ..+||+++|..+++....+.|.
T Consensus 46 ~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~-~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~ 124 (164)
T 1sen_A 46 GLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDE-EEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINEN 124 (164)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGG-GSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTT
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCC-chHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCC
Confidence 34555555 3322 2234444444433333466777765432 1227788888 5599999994334322223442
Q ss_pred ---------CChhHHHHHHHHh
Q 005374 351 ---------FNNSRLSEVMEQN 363 (699)
Q Consensus 351 ---------~~~~~L~~fi~~~ 363 (699)
.+.+.|.++|+..
T Consensus 125 ~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 125 GNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp SCTTSTTCCCSHHHHHHHHHHH
T ss_pred CccchhcccCCHHHHHHHHHHH
Confidence 5667777777653
No 456
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=78.40 E-value=1.6 Score=36.63 Aligned_cols=56 Identities=7% Similarity=0.004 Sum_probs=33.3
Q ss_pred EEEEeccCCCCC------CCcchHHHHHHHHhhcccceeeeeccchhhh-hHHHHhCCCCcccccccccEEEE
Q 005374 157 LIQVYSDGSYLC------GQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVA 222 (699)
Q Consensus 157 lV~FYapwC~hC------k~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~-~~L~~k~~i~~~f~V~gyPTl~~ 222 (699)
++.|+++||+.| ++....+++ .+ +.+-.+|.+.++.. ..|.+..|.. ...+|.|.+
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~-----~~-i~~~~~di~~~~~~~~~l~~~~g~~----~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG-----KR-IQYQLVDISQDNALRDEMRTLAGNP----KATPPQIVN 66 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH-----TT-CCCEEEETTSCHHHHHHHHHHTTCT----TCCSCEEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH-----CC-CceEEEECCCCHHHHHHHHHHhCCC----CCCCCEEEE
Confidence 577899999999 554433322 12 36778888754332 2355555511 338898753
No 457
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=77.06 E-value=1.2 Score=36.82 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=34.9
Q ss_pred EEEEecc----CCCCCCCcchHHHHHHHHhhcccceeeeecc-----chhh-hhHHHHhCCCCcccccc-----cccEEE
Q 005374 157 LIQVYSD----GSYLCGQFSGAWKTIAALLEGIANTGMVELG-----DIRL-ATHLAERKPIGQIFFRR-----GLPSLV 221 (699)
Q Consensus 157 lV~FYap----wC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~-----~~~~-~~~L~~k~~i~~~f~V~-----gyPTl~ 221 (699)
++.|..+ ||++|++....+++. + +.+-.+|.+ .++. ...|.+..| .. ++|+|.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-----g-i~y~~idI~~~~~~~~~~~~~~l~~~~g------~~~~~~~tvP~v~ 69 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-----K-QPFEFINIMPEKGVFDDEKIAELLTKLG------RDTQIGLTMPQVF 69 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-----T-CCEEEEESCSBTTBCCHHHHHHHHHHHT------CSCCTTCCSCEEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-----C-CCEEEEEeeccccccCHHHHHHHHHHhC------CCCCCCCccCEEE
Confidence 4678889 999998766554442 2 256666766 3322 233666666 45 789865
Q ss_pred EcCCC
Q 005374 222 AFPPG 226 (699)
Q Consensus 222 ~f~~g 226 (699)
+ .+|
T Consensus 70 i-~~g 73 (87)
T 1aba_A 70 A-PDG 73 (87)
T ss_dssp C-TTS
T ss_pred E-ECC
Confidence 4 245
No 458
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=76.89 E-value=1.9 Score=42.80 Aligned_cols=54 Identities=7% Similarity=-0.085 Sum_probs=41.5
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhccc-ceeeeeccchhhhhHHHHh
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAER 205 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~-~va~Vdc~~~~~~~~L~~k 205 (699)
.++.+++.|| ++||+.|..-.+.+.+...+++... .|..|.++....+...++.
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~~ 106 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTNI 106 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTS
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHHH
Confidence 3577888899 9999999999999999999997654 7778888854444444443
No 459
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=76.82 E-value=2.5 Score=39.86 Aligned_cols=44 Identities=2% Similarity=-0.045 Sum_probs=31.5
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCcee---------ecCCCChhHHHHHHHHh
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVV---------YYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~---------y~g~~~~~~L~~fi~~~ 363 (699)
..+++.|+|...|+++++..++.-... +.|..+.+.|.+.|+..
T Consensus 120 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 120 QEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp CHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred hHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHH
Confidence 468899999999999999655532222 23556778888888764
No 460
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=76.43 E-value=2.6 Score=44.83 Aligned_cols=44 Identities=14% Similarity=0.231 Sum_probs=33.3
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
..+++.|+|...|+++++..++.....+.|..+.+.|.++|++.
T Consensus 154 ~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 154 YATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL 197 (352)
T ss_dssp SHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 46889999999999999965554433467878888888887653
No 461
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=76.03 E-value=1.3 Score=38.97 Aligned_cols=54 Identities=7% Similarity=-0.034 Sum_probs=33.5
Q ss_pred EEEEec-----cCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhh-HHHHhCCCCcccccccccEEEE
Q 005374 157 LIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERKPIGQIFFRRGLPSLVA 222 (699)
Q Consensus 157 lV~FYa-----pwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~-~L~~k~~i~~~f~V~gyPTl~~ 222 (699)
+|.|.. |||++|++....+++. | +.+-.+|.+.++... .|.+..| ...+|.|.+
T Consensus 18 Vvlf~kg~~~~~~Cp~C~~ak~~L~~~-----g-i~y~~~di~~d~~~~~~l~~~~g------~~tvP~ifi 77 (111)
T 3zyw_A 18 CMLFMKGTPQEPRCGFSKQMVEILHKH-----N-IQFSSFDIFSDEEVRQGLKAYSS------WPTYPQLYV 77 (111)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHT-----T-CCCEEEEGGGCHHHHHHHHHHHT------CCSSCEEEE
T ss_pred EEEEEecCCCCCcchhHHHHHHHHHHc-----C-CCeEEEECcCCHHHHHHHHHHHC------CCCCCEEEE
Confidence 356677 9999998877555532 2 356777877554432 2444434 458998754
No 462
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=74.71 E-value=4.4 Score=36.66 Aligned_cols=42 Identities=7% Similarity=0.072 Sum_probs=30.2
Q ss_pred hHHhhcCCCCCC---------------EEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 321 ~l~~kf~V~~~P---------------tIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
.+.+.|+|...| +++++...+.-...+.|..+.+.|.+.|+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 158 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 488899998777 777776655544446777788778777765
No 463
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=73.96 E-value=9.7 Score=35.40 Aligned_cols=44 Identities=14% Similarity=0.131 Sum_probs=32.8
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
..+++.|+|...|+++++...+.-...+.|..+.+.+.++|...
T Consensus 122 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 122 GTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPL 165 (176)
T ss_dssp CHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHH
T ss_pred chHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 46888999999999888866554433457888888887776653
No 464
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=73.20 E-value=2.4 Score=35.47 Aligned_cols=47 Identities=15% Similarity=0.228 Sum_probs=34.6
Q ss_pred EEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 309 FAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 309 Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
|..|.+.. .++++.+|++. .|+|++ .+ ++ .+ . |.++.+.|.++++..
T Consensus 29 ~~~vdid~--~~~l~~~~g~~-vPtl~~-~~-G~-~v-~-g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 29 FFSVFIDD--DAALESAYGLR-VPVLRD-PM-GR-EL-D-WPFDAPRLRAWLDAA 75 (87)
T ss_dssp EEEEECTT--CHHHHHHHTTT-CSEEEC-TT-CC-EE-E-SCCCHHHHHHHHHTC
T ss_pred eEEEECCC--CHHHHHHhCCC-cCeEEE-EC-CE-EE-e-CCCCHHHHHHHHHHH
Confidence 56666443 57799999998 999988 54 32 23 2 788999999998754
No 465
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=72.77 E-value=7.6 Score=35.35 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=29.8
Q ss_pred hHHhhcCCCCCC---------------EEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 321 ~l~~kf~V~~~P---------------tIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
.+++.|+|...| +++++-..+.-...+.|..+.+.|.+.|+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 578899997666 777776555444446777888777777764
No 466
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=72.24 E-value=2.4 Score=40.07 Aligned_cols=80 Identities=6% Similarity=-0.116 Sum_probs=48.9
Q ss_pred CcEEEEEEc-CC---CCCchHHHHHHHHhccCCceEEEEEccccccHhHHhhcC---CCCCCEEEEEcCCCCCceeecCC
Q 005374 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFE---VESAPAIVFLKDPGVKPVVYYGS 350 (699)
Q Consensus 278 ~~v~vl~f~-~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~~~s~~l~~kf~---V~~~PtIvlfk~~~~~pv~y~g~ 350 (699)
+++.++.|. +- |....|.+..++..+. .+.|..|... +..+++.+|. +.+.||+++|++++.. +...|.
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d--~~~~~~~~~~~~~v~~iPt~i~~~~~G~~-~~~~g~ 129 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKG--RAEDDLRQRLALERIAIPLVLVLDEEFNL-LGRFVE 129 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHH--HHHHHTTTTTTCSSCCSSEEEEECTTCCE-EEEEES
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECC--CCHHHHHHHHHcCCCCcCeEEEECCCCCE-EEEEcC
Confidence 456666563 22 2234677777777664 5777776532 3467888887 9999999999886543 333354
Q ss_pred CChhHHHHHHHH
Q 005374 351 FNNSRLSEVMEQ 362 (699)
Q Consensus 351 ~~~~~L~~fi~~ 362 (699)
.+ ..+.+.+..
T Consensus 130 ~p-~~~~~~i~~ 140 (167)
T 1z6n_A 130 RP-QAVLDGGPQ 140 (167)
T ss_dssp SC-HHHHHHCHH
T ss_pred CC-HHHHHhHHH
Confidence 44 334444443
No 467
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=71.89 E-value=7.2 Score=36.26 Aligned_cols=71 Identities=7% Similarity=0.142 Sum_probs=43.3
Q ss_pred hHHHHHHHHhcc-CCceEEEEEccccc---cHhHHhhcCCC-----------------------CCCEEEEEcCCCCCce
Q 005374 293 SPFVRQISRNYW-AYASFAFVLWREEE---SSIWWNTFEVE-----------------------SAPAIVFLKDPGVKPV 345 (699)
Q Consensus 293 ~~~~~~~A~~~~-~~~~Fg~V~~~~~~---s~~l~~kf~V~-----------------------~~PtIvlfk~~~~~pv 345 (699)
.+.+..+..+|. ..+.+..|.....+ ...+++++++. ..|+++++..++.-..
T Consensus 79 ~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~ 158 (186)
T 1jfu_A 79 MPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIA 158 (186)
T ss_dssp HHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEE
T ss_pred HHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEE
Confidence 344555666665 45677777654321 14566777764 6899999965554333
Q ss_pred eecCCCC--hhHHHHHHHHh
Q 005374 346 VYYGSFN--NSRLSEVMEQN 363 (699)
Q Consensus 346 ~y~g~~~--~~~L~~fi~~~ 363 (699)
.+.|..+ .+.|.++|+..
T Consensus 159 ~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 159 TIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp EEESCCCTTSHHHHHHHHHH
T ss_pred EEecCCccCHHHHHHHHHHH
Confidence 4566654 56788877653
No 468
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=71.32 E-value=1.9 Score=37.48 Aligned_cols=50 Identities=14% Similarity=0.084 Sum_probs=30.7
Q ss_pred cCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhh-hHHHHhCCCCcccccccccEEEEcCCC
Q 005374 163 DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (699)
Q Consensus 163 pwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~-~~L~~k~~i~~~f~V~gyPTl~~f~~g 226 (699)
|||++|++....+.+. + +.+-.+|.++++.. ..|.+..+ ...+|+|++ +|
T Consensus 31 p~Cp~C~~ak~~L~~~-----g-i~~~~~dI~~~~~~~~~l~~~~g------~~tvP~ifi--~g 81 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL-----N-VPFEDVNILENEMLRQGLKEYSN------WPTFPQLYI--GG 81 (109)
T ss_dssp BSSHHHHHHHHHHHHT-----T-CCCEEEEGGGCHHHHHHHHHHHT------CSSSCEEEE--TT
T ss_pred CCChhHHHHHHHHHHc-----C-CCcEEEECCCCHHHHHHHHHHHC------CCCCCeEEE--CC
Confidence 6999998877655543 2 35677777654332 23444445 458997644 55
No 469
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=71.29 E-value=4.6 Score=35.63 Aligned_cols=37 Identities=14% Similarity=0.339 Sum_probs=27.7
Q ss_pred hhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 324 NTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 324 ~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
+.|+|...|+++++...+. +++ +..+.+.|.++|++.
T Consensus 103 ~~~~v~~~P~~~lid~~G~--i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 103 QLYDIRATPTIYLLDGRKR--VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp TCSCCCSSSEEEEECTTCB--EEE-CSCCHHHHHHHHHC-
T ss_pred HHcCCCCCCeEEEECCCCC--EEe-cCCCHHHHHHHHHHH
Confidence 4899999999999965442 333 567888999998764
No 470
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=70.95 E-value=1.4 Score=42.89 Aligned_cols=42 Identities=14% Similarity=0.168 Sum_probs=30.4
Q ss_pred CCCcEEEEEeccCCCCCCCcchHH-HHHHHHh--hcccceeeeec
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALL--EGIANTGMVEL 193 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~-~~~A~~L--~g~~~va~Vdc 193 (699)
+.++.+|+|+...|+||+++.+.. ..+.+.+ .|.++|...+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 567889999999999999998865 5666666 34445544443
No 471
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=70.05 E-value=3.7 Score=39.42 Aligned_cols=55 Identities=9% Similarity=0.059 Sum_probs=40.2
Q ss_pred CCcEEEEEe-ccCCCCCC-CcchHHHHHHHHh-hccc--ceeeeeccchhhhhHHHHhCC
Q 005374 153 SKPWLIQVY-SDGSYLCG-QFSGAWKTIAALL-EGIA--NTGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 153 ~~~~lV~FY-apwC~hCk-~l~p~~~~~A~~L-~g~~--~va~Vdc~~~~~~~~L~~k~~ 207 (699)
++.+++.|| +.||+-|. .-.+.|.+.+.++ +..+ .|..|.++....+...|++.+
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~ 102 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMD 102 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcC
Confidence 445555565 56999999 8888999999999 6543 377788875545556788876
No 472
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=70.00 E-value=17 Score=30.74 Aligned_cols=54 Identities=15% Similarity=0.154 Sum_probs=38.0
Q ss_pred cCCceEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 304 WAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 304 ~~~~~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
...+.|..+.+.+.+.++++.+|+ .+.|+|+ .++. .+ ..+.++.+.|.++|+..
T Consensus 41 ~~~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g~--~~-~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 41 KDRFILQEVDITLPENSTWYERYK-FDIPVFH--LNGQ--FL-MMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp SSSSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESSS--EE-EESSCCHHHHHHHHHSS
T ss_pred hhCCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECCE--EE-EecCCCHHHHHHHHHHH
Confidence 345889888876323578999999 8899863 3332 22 34558888999998754
No 473
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=69.72 E-value=3.7 Score=40.76 Aligned_cols=54 Identities=9% Similarity=0.076 Sum_probs=42.6
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhccc-ceeeeeccchhhhhHHHHh
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAER 205 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~-~va~Vdc~~~~~~~~L~~k 205 (699)
.++.+++.|| ++||+.|..-...+.+...+++... .|..|.++....+...+++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~ 110 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQ 110 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHS
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhh
Confidence 3567788899 8999999999999999999998765 7888888855444445544
No 474
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=69.27 E-value=3.2 Score=36.98 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=31.1
Q ss_pred cCCCCCCCcchHHHHHHHHhhccc--ceeeeeccchhhhh-HHHHhCCCCcccccccccEEEEcCCC
Q 005374 163 DGSYLCGQFSGAWKTIAALLEGIA--NTGMVELGDIRLAT-HLAERKPIGQIFFRRGLPSLVAFPPG 226 (699)
Q Consensus 163 pwC~hCk~l~p~~~~~A~~L~g~~--~va~Vdc~~~~~~~-~L~~k~~i~~~f~V~gyPTl~~f~~g 226 (699)
|||++|++....+.+. |+. .+..+|..++.... .|.+..| ...+|.|.+ +|
T Consensus 29 p~Cp~C~~ak~lL~~~-----gv~~~~~~~~dv~~~~~~~~~l~~~sg------~~tvP~vfI--~g 82 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ-----GVDPAKFAAYNVLEDPELREGIKEFSE------WPTIPQLYV--NK 82 (121)
T ss_dssp BCTTHHHHHHHHHHHH-----TBCGGGEEEEECTTCHHHHHHHHHHHT------CCSSCEEEE--TT
T ss_pred CCCccHHHHHHHHHHc-----CCCcceEEEEEecCCHHHHHHHHHHhC------CCCCCeEEE--CC
Confidence 6999999887666654 221 26677776544332 2444445 458888744 55
No 475
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=68.78 E-value=4.6 Score=46.43 Aligned_cols=48 Identities=13% Similarity=0.065 Sum_probs=37.6
Q ss_pred CCccCcccccCcCCCCCH--HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHH
Q 005374 34 SFPPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYEL 86 (699)
Q Consensus 34 ~~~~d~Y~vLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~~~f~~I~~Ay~v 86 (699)
....++|.+||++.+... .+|+++||+|++..+++ .+++..|..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-----~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-----RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-----HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-----HHHHHHHHHhccc
Confidence 335579999999776655 77999999999976554 5688888888765
No 476
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=67.36 E-value=7.4 Score=35.17 Aligned_cols=33 Identities=6% Similarity=0.097 Sum_probs=23.2
Q ss_pred HHhhcCCCCCCEEEEEcCCCCCceeecCCCChh
Q 005374 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (699)
Q Consensus 322 l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~ 354 (699)
+.+.|+|...|+++++...+.-...+.|..+.+
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e 137 (152)
T 2lrt_A 105 YISLYNVTNLPSVFLVNRNNELSARGENIKDLD 137 (152)
T ss_dssp HHHHHTCCSCSEEEEEETTTEEEEETTTCSCHH
T ss_pred HHHHcCcccCceEEEECCCCeEEEecCCHHHHH
Confidence 889999999999999966554333345554443
No 477
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=67.12 E-value=2.4 Score=37.69 Aligned_cols=48 Identities=6% Similarity=-0.011 Sum_probs=28.5
Q ss_pred cCCCCCCCcchHHHHHHHHhhcccc-eeeeeccchhhhh-HHHHhCCCCcccccccccEEEE
Q 005374 163 DGSYLCGQFSGAWKTIAALLEGIAN-TGMVELGDIRLAT-HLAERKPIGQIFFRRGLPSLVA 222 (699)
Q Consensus 163 pwC~hCk~l~p~~~~~A~~L~g~~~-va~Vdc~~~~~~~-~L~~k~~i~~~f~V~gyPTl~~ 222 (699)
|||++|++....+++. + +. +..+|.++++... .|.+..+ ...+|+|++
T Consensus 33 p~Cp~C~~ak~lL~~~-----g-v~~~~~vdV~~d~~~~~~l~~~tg------~~tvP~vfI 82 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH-----G-VRDYAAYNVLDDPELRQGIKDYSN------WPTIPQVYL 82 (118)
T ss_dssp BSSHHHHHHHHHHHHT-----T-CCCCEEEESSSCHHHHHHHHHHHT------CCSSCEEEE
T ss_pred CccHHHHHHHHHHHHc-----C-CCCCEEEEcCCCHHHHHHHHHHhC------CCCcCeEEE
Confidence 6999998876555542 1 22 6677776543332 2444434 458999744
No 478
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=67.08 E-value=8.3 Score=36.56 Aligned_cols=55 Identities=2% Similarity=-0.063 Sum_probs=41.6
Q ss_pred CCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhccc-c-eeeeeccchhhhhHHHHhCC
Q 005374 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-N-TGMVELGDIRLATHLAERKP 207 (699)
Q Consensus 153 ~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~-~-va~Vdc~~~~~~~~L~~k~~ 207 (699)
++.+++.|| ..||+-|..-.+.|.+.+.+++..+ . |..|.++........|++.+
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~ 99 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVD 99 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHC
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 455555566 4599999999999999999997543 3 88888886555566788776
No 479
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=67.04 E-value=4.4 Score=42.44 Aligned_cols=97 Identities=12% Similarity=0.059 Sum_probs=51.4
Q ss_pred CCCcEEEEEe-ccCCCCCCCcchHHHHHHHHhhcccceeeeeccchhhhhHHHHhCCCC------------cccccc---
Q 005374 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIG------------QIFFRR--- 215 (699)
Q Consensus 152 ~~~~~lV~FY-apwC~hCk~l~p~~~~~A~~L~g~~~va~Vdc~~~~~~~~L~~k~~i~------------~~f~V~--- 215 (699)
.++++++.|| +.||+.|..-.+.+.+. ..++ ..|..|+++........++++++. +.|+|.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~~--~~~~-~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~ 99 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSRE--NFEK-AQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENG 99 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHHS--CCTT-EEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHH--hhCC-CEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCC
Confidence 3678888999 56898897655555431 1222 245556665333333344443221 123352
Q ss_pred -cccEEEEc-CCCCCCCCccccccCCcCHHHHHHHHHHH
Q 005374 216 -GLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (699)
Q Consensus 216 -gyPTl~~f-~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~ 252 (699)
.+|+.+++ ++|... ...........++.|++++.+.
T Consensus 100 ~~~r~tfiId~~G~i~-~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVR-KEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp EECCEEEEECTTSBEE-EEEESCCSTTHHHHHHHHHHHH
T ss_pred cCccEEEEECCCCEEE-EEEeCCCccccHHHHHHHHhhh
Confidence 35666666 445321 1111224456789999998765
No 480
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=66.36 E-value=2.2 Score=42.40 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=30.3
Q ss_pred CCCcEEEEEeccCCCCCCCcchH-HHHHHHHh--hcccceeeee
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGA-WKTIAALL--EGIANTGMVE 192 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~-~~~~A~~L--~g~~~va~Vd 192 (699)
+.++.+|+|+...|+||+++.+. ..++.+.+ .|.++|.-.+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 56778999999999999999985 57777676 3444443333
No 481
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=65.24 E-value=1.8 Score=41.50 Aligned_cols=32 Identities=3% Similarity=-0.194 Sum_probs=26.8
Q ss_pred cCCCcEEEEEeccCCCCCCCcchHHHHHHHHh
Q 005374 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALL 182 (699)
Q Consensus 151 ~~~~~~lV~FYapwC~hCk~l~p~~~~~A~~L 182 (699)
.+..+.||+|....|+||+++.+...++.++.
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~ 43 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQA 43 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHH
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHh
Confidence 46778899999999999999999887766654
No 482
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=59.20 E-value=12 Score=33.02 Aligned_cols=37 Identities=11% Similarity=0.248 Sum_probs=26.8
Q ss_pred HHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHH
Q 005374 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (699)
Q Consensus 322 l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~ 361 (699)
+.+.|+|...|+++++...+. +++.+ .+.+.|.+||+
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~--i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 105 NKNLYDLRAIPTLYLLDKNKT--VLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp HTTCSCCTTCSEEEEECTTCB--EEEEE-ECHHHHHHHHH
T ss_pred hhhhcCCCcCCeEEEECCCCc--EEecC-CCHHHHHHHHh
Confidence 578899999999999965543 33332 35678888875
No 483
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=55.55 E-value=9.7 Score=34.58 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=22.5
Q ss_pred CCCCEEEEEcCCCCCceeecCCC--ChhHHHHHHHH
Q 005374 329 ESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (699)
Q Consensus 329 ~~~PtIvlfk~~~~~pv~y~g~~--~~~~L~~fi~~ 362 (699)
...|+++++. .+.-...+.|.. +.+.|.+.|+.
T Consensus 136 ~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 136 DHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp EECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred ecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 4579999998 664433456665 77778777764
No 484
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=54.05 E-value=31 Score=31.48 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=26.1
Q ss_pred hcCCCCCC------EEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 325 TFEVESAP------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 325 kf~V~~~P------tIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
.|++.+.| +.+++...+.-...+.|..+.+.|.+.|+.
T Consensus 122 ~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (171)
T 3cmi_A 122 KSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEE 165 (171)
T ss_dssp SCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHH
T ss_pred cCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 46777788 777775555443345777788888777765
No 485
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=53.84 E-value=26 Score=33.79 Aligned_cols=70 Identities=10% Similarity=0.188 Sum_probs=45.7
Q ss_pred chHHHHHHHHhccCC-ceEEEEEccc---------------------------cccHhHHhhcCCCCCCEEEEEcCCCCC
Q 005374 292 ASPFVRQISRNYWAY-ASFAFVLWRE---------------------------EESSIWWNTFEVESAPAIVFLKDPGVK 343 (699)
Q Consensus 292 ~~~~~~~~A~~~~~~-~~Fg~V~~~~---------------------------~~s~~l~~kf~V~~~PtIvlfk~~~~~ 343 (699)
..+.+..++.+|.+. +.|..|...+ .....+.+.|+|...|+++++...+.
T Consensus 77 ~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~- 155 (218)
T 3u5r_E 77 IREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERR- 155 (218)
T ss_dssp THHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCB-
T ss_pred HHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCc-
Confidence 456666677777654 6677666521 11346889999999999999965443
Q ss_pred ceeecC-----------CCChhHHHHHHHHh
Q 005374 344 PVVYYG-----------SFNNSRLSEVMEQN 363 (699)
Q Consensus 344 pv~y~g-----------~~~~~~L~~fi~~~ 363 (699)
++|.| ..+.+.|.+.|+.-
T Consensus 156 -i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 156 -LVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp -EEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred -EEEeccccccccccccccCHHHHHHHHHHH
Confidence 34543 23456787777664
No 486
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=53.69 E-value=4.1 Score=39.75 Aligned_cols=38 Identities=16% Similarity=0.270 Sum_probs=28.9
Q ss_pred hHH-hhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHhh
Q 005374 321 IWW-NTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (699)
Q Consensus 321 ~l~-~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~~ 364 (699)
... ..+||.+.|++++ +++ .+.|..+.+.|.+.|....
T Consensus 158 ~~a~~~~GV~GtPtfvv---ng~---~~~G~~~~e~l~~~i~~~~ 196 (205)
T 3gmf_A 158 DEAINQYNVSGTPSFMI---DGI---LLAGTHDWASLRPQILARL 196 (205)
T ss_dssp HHHHHHHCCCSSSEEEE---TTE---ECTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEE---CCE---EEeCCCCHHHHHHHHHHHh
Confidence 355 8899999999988 332 3578888888988887643
No 487
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=52.71 E-value=14 Score=34.07 Aligned_cols=54 Identities=15% Similarity=0.153 Sum_probs=34.2
Q ss_pred eEEEEEccccccHhHHhhcCCCCCCEEEEEcCCCCCceeecCC-------CChhHHHHHHHH
Q 005374 308 SFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-------FNNSRLSEVMEQ 362 (699)
Q Consensus 308 ~Fg~V~~~~~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~-------~~~~~L~~fi~~ 362 (699)
.|..|.+.. +..++...|++.+.||+++|+.+++......|. ....++..+++.
T Consensus 79 ~fv~V~vD~-e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 79 KFIMLNLMH-ETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp TCEEEEESS-CCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHH
T ss_pred CeEEEEecC-CchhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHH
Confidence 466666532 234577899999999999998655432223555 455566666554
No 488
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=52.04 E-value=20 Score=33.79 Aligned_cols=45 Identities=4% Similarity=0.025 Sum_probs=30.4
Q ss_pred HhHHhhcCCC-----CCCEEEEEcCCCCCceeecCCC----ChhHHHHHHHHhh
Q 005374 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQNK 364 (699)
Q Consensus 320 ~~l~~kf~V~-----~~PtIvlfk~~~~~pv~y~g~~----~~~~L~~fi~~~~ 364 (699)
..+.+.|++. ..|+.+++..++.-...+.|.. +.+.|.+.|+...
T Consensus 107 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 107 KSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp SHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 4688899998 8999999976554333344544 4566777776543
No 489
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=51.96 E-value=5.2 Score=37.61 Aligned_cols=31 Identities=10% Similarity=0.149 Sum_probs=25.2
Q ss_pred CCCcEEEEEeccCCCCCCCcchHH-HHHHHHh
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALL 182 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~-~~~A~~L 182 (699)
+.++.+++|+.+.|++|..+.+.. .++.+.+
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~ 41 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNY 41 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHh
Confidence 467789999999999999999987 4566665
No 490
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=51.86 E-value=4.1 Score=42.22 Aligned_cols=70 Identities=9% Similarity=0.028 Sum_probs=43.3
Q ss_pred EEEEcCC---CCCchHHHHHHHHhccCCceEEEEEccc--cccHhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHH
Q 005374 282 VIFFSKT---GERASPFVRQISRNYWAYASFAFVLWRE--EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (699)
Q Consensus 282 vl~f~~~---~~~~~~~~~~~A~~~~~~~~Fg~V~~~~--~~s~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L 356 (699)
+.|+.+- |....|.+..+|.++ .+..+...+ .+.++++++|+|.++||+++ + ++ .+.|..+.++|
T Consensus 202 V~F~A~WC~~Ck~l~p~le~lA~~l----~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~-G~---~~~G~~~~~~L 271 (291)
T 3kp9_A 202 TMYGAYWCPHCQDQKELFGAAFDQV----PYVECSPNGPGTPQAQECTEAGITSYPTWII--N-GR---TYTGVRSLEAL 271 (291)
T ss_dssp EEEECTTCHHHHHHHHHHGGGGGGS----CEEESCSSCSSSCCCHHHHTTTCCSTTEEEE--T-TE---EEESCCCHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHc----CEEEEeecCchhhHHHHHHHcCCcccCeEEE--C-CE---EecCCCCHHHH
Confidence 4455432 233456665555443 333332111 12578999999999999655 3 32 38899999999
Q ss_pred HHHHH
Q 005374 357 SEVME 361 (699)
Q Consensus 357 ~~fi~ 361 (699)
.+|+.
T Consensus 272 ~~~l~ 276 (291)
T 3kp9_A 272 AVASG 276 (291)
T ss_dssp HHHTC
T ss_pred HHHHC
Confidence 99864
No 491
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=50.82 E-value=11 Score=33.20 Aligned_cols=39 Identities=15% Similarity=0.418 Sum_probs=26.7
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHH
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~ 361 (699)
..+.+.|+|...|+.+++...+. +++. ....+.|.++++
T Consensus 103 ~~~~~~~~v~~~P~~~lid~~G~--i~~~-~~~~~~l~~~l~ 141 (143)
T 4fo5_A 103 SELYKKYDLRKGFKNFLINDEGV--IIAA-NVTPEKLTEILK 141 (143)
T ss_dssp SHHHHHTTGGGCCCEEEECTTSB--EEEE-SCCHHHHHHHHT
T ss_pred hHHHHHcCCCCCCcEEEECCCCE--EEEc-cCCHHHHHHHHH
Confidence 35888999999999999975543 3332 245666777664
No 492
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=49.00 E-value=30 Score=32.43 Aligned_cols=44 Identities=9% Similarity=-0.059 Sum_probs=29.3
Q ss_pred HhHHhhcCCC-----CCCEEEEEcCCCCCceeecCCC----ChhHHHHHHHHh
Q 005374 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQN 363 (699)
Q Consensus 320 ~~l~~kf~V~-----~~PtIvlfk~~~~~pv~y~g~~----~~~~L~~fi~~~ 363 (699)
..+.+.|++. ..|+++++...+.-...+.|.. +.+.|.+.|+..
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 4578889998 8999999976554333344543 456677776643
No 493
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=47.59 E-value=38 Score=31.41 Aligned_cols=45 Identities=13% Similarity=0.161 Sum_probs=29.9
Q ss_pred HhHHhhcCCC------CCCEEEEEcCCCCCceeecCCC----ChhHHHHHHHHhh
Q 005374 320 SIWWNTFEVE------SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQNK 364 (699)
Q Consensus 320 ~~l~~kf~V~------~~PtIvlfk~~~~~pv~y~g~~----~~~~L~~fi~~~~ 364 (699)
..+++.|++. ..|+++++...+.-...+.|.. +.+.|.+.|+...
T Consensus 102 ~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 102 QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 4588899998 7899999965554333344443 5667777776543
No 494
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=53.05 E-value=4 Score=35.94 Aligned_cols=22 Identities=27% Similarity=0.435 Sum_probs=18.5
Q ss_pred HhHHhhcCCCCCCEEEEEcCCC
Q 005374 320 SIWWNTFEVESAPAIVFLKDPG 341 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~ 341 (699)
..+++.|+|.+.|+++++..++
T Consensus 98 ~~~~~~~~v~~~P~~~lid~~G 119 (143)
T 2lus_A 98 SNVTAKYGITGIPALVIVKKDG 119 (143)
Confidence 4688999999999999997544
No 495
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=47.11 E-value=4.5 Score=41.48 Aligned_cols=27 Identities=11% Similarity=-0.010 Sum_probs=22.9
Q ss_pred CCCcEEEEEeccCCCCCCCcchHHHHH
Q 005374 152 DSKPWLIQVYSDGSYLCGQFSGAWKTI 178 (699)
Q Consensus 152 ~~~~~lV~FYapwC~hCk~l~p~~~~~ 178 (699)
+.+..++.|..|.|++|+++.+..++.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~ 172 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDH 172 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHH
Confidence 367899999999999999988777643
No 496
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=46.03 E-value=20 Score=30.38 Aligned_cols=43 Identities=12% Similarity=0.056 Sum_probs=25.9
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCC---ChhHHHHHHHHhhc
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF---NNSRLSEVMEQNKL 365 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~---~~~~L~~fi~~~~~ 365 (699)
..+++.|++.+.|++ + .+ ++.-..+.|.. +.+.|.++++....
T Consensus 63 ~~l~~~~~v~~~Pt~-~-~~-g~~v~~~~~~~~~~~~~~l~~~l~~~g~ 108 (116)
T 2e7p_A 63 SALAHWTGRGTVPNV-F-IG-GKQIGGCDTVVEKHQRNELLPLLQDAAA 108 (116)
T ss_dssp HHHHHHHSCCSSCEE-E-ET-TEEEECHHHHHHHHHTTCHHHHHHHTTC
T ss_pred HHHHHHhCCCCcCEE-E-EC-CEEECChHHHHHHHhCChHHHHHHHccc
Confidence 468999999999999 3 33 22111122222 45568888876543
No 497
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=45.80 E-value=16 Score=34.94 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=32.5
Q ss_pred HHHhCCCCcccccccccEEEEcCCCCCCCCccccccCCcCHHHHHHHHHHHh
Q 005374 202 LAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (699)
Q Consensus 202 L~~k~~i~~~f~V~gyPTl~~f~~g~~~~~~~~~Y~G~rs~~~Iv~fi~k~v 253 (699)
++.++| |.|+||++++.+|.. ...+.|..+.+.+.+++.+.+
T Consensus 168 ~a~~~g------v~g~Pt~~i~~~G~~----~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 168 RVAQWG------ISGFPALVVESGTDR----YLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHTT------CCSSSEEEEEETTEE----EEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHcC------CcccceEEEEECCEE----EEeccCCCCHHHHHHHHHHHH
Confidence 677788 779999999887742 124689899999999987763
No 498
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=44.87 E-value=28 Score=31.87 Aligned_cols=38 Identities=13% Similarity=0.258 Sum_probs=29.0
Q ss_pred HhHHhhcCCCCCCEEEEEcCCCCCceeecCCCChhHHHHHHHHh
Q 005374 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (699)
Q Consensus 320 ~~l~~kf~V~~~PtIvlfk~~~~~pv~y~g~~~~~~L~~fi~~~ 363 (699)
..++.++||.+.||+++ ++ + .+.|..+.+.|.++|+..
T Consensus 134 ~~~a~~~gv~gtPt~~i---~g-~--~~~G~~~~~~l~~~i~~~ 171 (175)
T 3gyk_A 134 MALAQKLGFNGTPSFVV---ED-A--LVPGFVEQSQLQDAVDRA 171 (175)
T ss_dssp HHHHHHHTCCSSSEEEE---TT-E--EECSCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEE---CC-E--EeeCCCCHHHHHHHHHHH
Confidence 34678899999999987 23 2 457888888898888754
No 499
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=44.41 E-value=38 Score=30.33 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=21.6
Q ss_pred CCCC---EEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 329 ESAP---AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 329 ~~~P---tIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
...| +.+++...+.-...+.|..+.+.|.+.|+.
T Consensus 129 ~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (170)
T 2p5q_A 129 DDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQ 165 (170)
T ss_dssp SCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred CcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 3456 777775555433345777777778777765
No 500
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=43.58 E-value=1.1e+02 Score=28.27 Aligned_cols=34 Identities=9% Similarity=0.108 Sum_probs=22.2
Q ss_pred CCCC---EEEEEcCCCCCceeecCCCChhHHHHHHHH
Q 005374 329 ESAP---AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (699)
Q Consensus 329 ~~~P---tIvlfk~~~~~pv~y~g~~~~~~L~~fi~~ 362 (699)
...| +.+++...+.-...+.|..+.+.|.+.|+.
T Consensus 144 ~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~ 180 (187)
T 3dwv_A 144 KAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIP 180 (187)
T ss_dssp SSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHH
T ss_pred CccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHH
Confidence 3455 777776555443346777788888877764
Done!