Your job contains 1 sequence.
>005380
MTGGGGGESPLTPACNGGEFLLSLLQKPQQHPQAPPHQTPPQQPSLPNDPAVAAVGPTIN
FQPQWPSNGCDLPPTWPRTPLPLNFLGFPQNPWASSSTENQQQRLLCEDFGRLGFSNANY
AAIHNLIQQPNHQQQQNLRFGSFQVQPDSLLNLNHLENLKYNLDRNSQFDQPRASSISNP
NSFLHRNLENSREHDLRLGKQHYGSTPPPGFSNKARVGGSGNSRRGFEHNVDMINRFTSS
AVEGGNGVGLTRQLDRPGPPSGSNLHSVSALDIEESLLDLRREGRERHLGLDKRRENGPG
YSQGGDDMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDNRGKRLLSQR
MRNLKWQIECRADIGRLNAPFLAIYESLIPAEEEKAKQKKLLTLLEKLVCKEWPDARLYL
YGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQALTRARVPIVKL
MDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLS
SYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDKLHGFGSRNKESIG
RLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLG
RVVDKFSIKVLREEFERAAEIMQHDPNPCVKLFEPYVPG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005380
(699 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043669 - symbol:AT2G45620 species:3702 "Arabi... 1544 2.0e-173 2
DICTYBASE|DDB_G0278425 - symbol:DDB_G0278425 species:4468... 611 3.2e-64 3
UNIPROTKB|Q2KEW4 - symbol:MGCH7_ch7g922 "Putative unchara... 527 6.2e-51 2
POMBASE|SPBC1685.06 - symbol:cid11 "poly(A) polymerase Ci... 492 5.4e-47 1
POMBASE|SPAC821.04c - symbol:cid13 "poly(A) polymerase Ci... 446 4.0e-42 1
POMBASE|SPAC19D5.03 - symbol:cid1 "poly(A) polymerase Cid... 432 1.2e-40 1
UNIPROTKB|Q5VYS8 - symbol:ZCCHC6 "Terminal uridylyltransf... 420 1.0e-36 2
UNIPROTKB|Q641A1 - symbol:papd4-a "Poly(A) RNA polymerase... 395 2.3e-36 1
UNIPROTKB|E1BAR2 - symbol:ZCCHC6 "Uncharacterized protein... 420 2.7e-36 1
UNIPROTKB|E2RM29 - symbol:ZCCHC6 "Uncharacterized protein... 416 3.1e-35 2
UNIPROTKB|J9P044 - symbol:ZCCHC6 "Uncharacterized protein... 416 3.4e-35 2
ZFIN|ZDB-GENE-050522-536 - symbol:papd4 "PAP associated d... 383 5.3e-35 1
UNIPROTKB|K7GM92 - symbol:ZCCHC6 "Uncharacterized protein... 416 7.3e-35 3
MGI|MGI:2387179 - symbol:Zcchc6 "zinc finger, CCHC domain... 404 2.1e-34 1
UNIPROTKB|E9PKY2 - symbol:ZCCHC11 "Terminal uridylyltrans... 403 2.5e-34 2
MGI|MGI:2445126 - symbol:Zcchc11 "zinc finger, CCHC domai... 403 3.1e-34 1
UNIPROTKB|I3L9X5 - symbol:ZCCHC11 "Uncharacterized protei... 400 3.9e-34 1
UNIPROTKB|F1S6H9 - symbol:ZCCHC11 "Uncharacterized protei... 400 5.1e-34 1
RGD|1586015 - symbol:Zcchc6 "zinc finger, CCHC domain con... 406 5.6e-34 2
UNIPROTKB|F1S4J1 - symbol:ZCCHC6 "Uncharacterized protein... 409 6.6e-34 3
UNIPROTKB|Q5TAX3 - symbol:ZCCHC11 "Terminal uridylyltrans... 403 6.8e-34 2
UNIPROTKB|F1MCY7 - symbol:ZCCHC11 "Uncharacterized protei... 400 7.0e-34 1
UNIPROTKB|E1C6A7 - symbol:ZCCHC11 "Uncharacterized protei... 399 8.5e-34 1
UNIPROTKB|F1PFM0 - symbol:ZCCHC11 "Uncharacterized protei... 400 1.6e-33 2
UNIPROTKB|J9P9X1 - symbol:ZCCHC11 "Uncharacterized protei... 400 1.6e-33 2
UNIPROTKB|F1NYJ2 - symbol:LOC100857368 "Uncharacterized p... 393 4.7e-33 2
UNIPROTKB|F1NJM6 - symbol:LOC100857368 "Uncharacterized p... 393 6.6e-33 2
UNIPROTKB|E2RQN5 - symbol:PAPD4 "Uncharacterized protein"... 364 7.0e-33 1
MGI|MGI:2140950 - symbol:Papd4 "PAP associated domain con... 358 3.2e-32 1
RGD|1306438 - symbol:Papd4 "PAP associated domain contain... 357 4.2e-32 1
UNIPROTKB|Q2HJ44 - symbol:PAPD4 "Poly(A) RNA polymerase G... 354 3.6e-31 1
UNIPROTKB|Q6PIY7 - symbol:PAPD4 "Poly(A) RNA polymerase G... 354 3.6e-31 1
UNIPROTKB|F1RF43 - symbol:PAPD4 "Uncharacterized protein"... 352 8.9e-31 1
DICTYBASE|DDB_G0281431 - symbol:DDB_G0281431 "Terminal ur... 364 2.3e-29 2
WB|WBGene00019629 - symbol:cid-1 species:6239 "Caenorhabd... 346 6.5e-28 1
WB|WBGene00019628 - symbol:pup-2 species:6239 "Caenorhabd... 320 3.6e-26 1
FB|FBgn0038934 - symbol:Gld2 species:7227 "Drosophila mel... 332 4.3e-26 3
WB|WBGene00001596 - symbol:gld-2 species:6239 "Caenorhabd... 297 4.0e-24 3
UNIPROTKB|O17087 - symbol:gld-2 "Poly(A) RNA polymerase g... 297 4.0e-24 3
UNIPROTKB|E1C833 - symbol:PAPD4 "Uncharacterized protein"... 300 6.5e-24 1
TAIR|locus:2102709 - symbol:AT3G45750 "AT3G45750" species... 292 1.6e-22 1
POMBASE|SPAC17H9.01 - symbol:cid16 "poly(A) polymerase Ci... 281 7.0e-21 1
FB|FBgn0260780 - symbol:wisp "wispy" species:7227 "Drosop... 277 9.3e-21 3
TAIR|locus:2102714 - symbol:AT3G45760 species:3702 "Arabi... 269 1.9e-20 1
ZFIN|ZDB-GENE-050706-68 - symbol:tut1 "terminal uridylyl ... 240 2.9e-20 2
WB|WBGene00009284 - symbol:F31C3.2 species:6239 "Caenorha... 258 4.8e-19 3
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 262 1.3e-17 2
UNIPROTKB|F1NBW0 - symbol:MTPAP "Uncharacterized protein"... 231 1.6e-17 2
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 258 1.9e-17 2
UNIPROTKB|E9PKX1 - symbol:ZCCHC11 "Terminal uridylyltrans... 219 2.3e-17 2
CGD|CAL0005626 - symbol:orf19.429 species:5476 "Candida a... 211 1.1e-16 3
UNIPROTKB|F1MSM5 - symbol:MTPAP "Uncharacterized protein"... 220 1.8e-16 2
UNIPROTKB|Q9NVV4 - symbol:MTPAP "Poly(A) RNA polymerase, ... 225 4.4e-16 2
UNIPROTKB|A9JTS5 - symbol:tut1 "Speckle targeted PIP5K1A-... 219 5.3e-16 2
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 248 6.9e-16 3
MGI|MGI:1914690 - symbol:Mtpap "mitochondrial poly(A) pol... 226 7.1e-16 2
RGD|1310900 - symbol:Mtpap "mitochondrial poly(A) polymer... 218 5.5e-15 2
DICTYBASE|DDB_G0271962 - symbol:DDB_G0271962 species:4468... 220 5.6e-15 1
UNIPROTKB|E2RCU9 - symbol:MTPAP "Uncharacterized protein"... 217 9.0e-15 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 244 1.2e-14 3
UNIPROTKB|F1NJM3 - symbol:PAPD7 "Uncharacterized protein"... 162 1.2e-14 2
UNIPROTKB|E1BX86 - symbol:PAPD7 "Uncharacterized protein"... 162 2.3e-14 2
UNIPROTKB|F1MG03 - symbol:TUT1 "Speckle targeted PIP5K1A-... 213 3.7e-14 2
UNIPROTKB|Q1JPD6 - symbol:TUT1 "Speckle targeted PIP5K1A-... 213 3.7e-14 2
RGD|1561043 - symbol:Tut1 "terminal uridylyl transferase ... 208 3.9e-14 2
UNIPROTKB|F1RPX0 - symbol:TUT1 "Uncharacterized protein" ... 209 3.9e-14 2
UNIPROTKB|F6X6U9 - symbol:MIR3654 "Uncharacterized protei... 208 5.3e-14 2
UNIPROTKB|E2R634 - symbol:TUT1 "Uncharacterized protein" ... 208 6.4e-14 2
UNIPROTKB|E1BEH2 - symbol:PAPD7 "Uncharacterized protein"... 158 1.5e-13 2
SGD|S000005475 - symbol:PAP2 "Non-canonical poly(A) polym... 189 1.8e-13 3
UNIPROTKB|D2HS90 - symbol:TUT1 "Speckle targeted PIP5K1A-... 202 2.8e-13 2
ZFIN|ZDB-GENE-041021-1 - symbol:papd7 "PAP associated dom... 164 3.9e-13 2
MGI|MGI:1917294 - symbol:Tut1 "terminal uridylyl transfer... 197 7.8e-13 2
TAIR|locus:2063937 - symbol:HESO1 "HEN1 suppressor 1" spe... 201 9.0e-13 1
POMBASE|SPCC663.12 - symbol:cid12 "poly(A) polymerase Cid... 141 1.2e-12 2
UNIPROTKB|F1NCH7 - symbol:PAPD5 "Uncharacterized protein"... 160 1.3e-12 2
FB|FBgn0030049 - symbol:Trf4-1 species:7227 "Drosophila m... 167 1.7e-12 3
WB|WBGene00003499 - symbol:mut-2 species:6239 "Caenorhabd... 197 1.8e-12 1
UNIPROTKB|Q9H6E5 - symbol:TUT1 "Speckle targeted PIP5K1A-... 194 2.1e-12 2
UNIPROTKB|F5H0R1 - symbol:TUT1 "Speckle targeted PIP5K1A-... 194 2.4e-12 2
POMBASE|SPAC12G12.13c - symbol:cid14 "poly(A) polymerase ... 197 4.2e-12 1
UNIPROTKB|I3LUY3 - symbol:PAPD5 "Uncharacterized protein"... 156 4.3e-12 2
UNIPROTKB|Q8NDF8 - symbol:PAPD5 "PAP-associated domain-co... 156 6.7e-12 2
FB|FBgn0039251 - symbol:Trf4-2 species:7227 "Drosophila m... 162 7.5e-12 2
UNIPROTKB|E9PC61 - symbol:PAPD5 "PAP-associated domain-co... 156 8.5e-12 2
MGI|MGI:1917820 - symbol:Papd5 "PAP associated domain con... 156 9.1e-12 2
UNIPROTKB|J9P5I2 - symbol:PAPD5 "Uncharacterized protein"... 156 2.5e-11 3
DICTYBASE|DDB_G0295737 - symbol:DDB_G0295737 "PAP/25A-ass... 195 2.8e-11 2
UNIPROTKB|F1PHH1 - symbol:PAPD5 "Uncharacterized protein"... 156 2.9e-11 3
UNIPROTKB|J9P9B2 - symbol:PAPD5 "Uncharacterized protein"... 156 3.6e-11 3
UNIPROTKB|B4DV38 - symbol:PAPD5 "PAP-associated domain-co... 156 4.3e-11 3
SGD|S000005243 - symbol:TRF5 "Non-canonical poly(A) polym... 164 1.2e-10 2
UNIPROTKB|F1MNP2 - symbol:F1MNP2 "Uncharacterized protein... 137 4.1e-10 2
UNIPROTKB|H3BRB1 - symbol:MIR3654 "Protein MIR3654" speci... 166 5.1e-10 2
TAIR|locus:2164047 - symbol:AT5G53770 "AT5G53770" species... 144 7.8e-09 2
UNIPROTKB|E2RJX8 - symbol:PAPD7 "Uncharacterized protein"... 161 2.4e-08 1
RGD|1307356 - symbol:Papd7 "PAP associated domain contain... 159 4.0e-08 1
UNIPROTKB|Q5XG87 - symbol:PAPD7 "DNA polymerase sigma" sp... 158 5.2e-08 1
MGI|MGI:2682295 - symbol:Papd7 "PAP associated domain con... 158 5.2e-08 1
UNIPROTKB|F1S0S9 - symbol:PAPD7 "Uncharacterized protein"... 155 1.1e-07 1
WARNING: Descriptions of 7 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2043669 [details] [associations]
symbol:AT2G45620 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC003680 eggNOG:COG5260
InterPro:IPR002058 GO:GO:0016779 EMBL:AF360181 EMBL:AY039997
IPI:IPI00541796 PIR:T00875 RefSeq:NP_566048.1 UniGene:At.19458
UniGene:At.74976 ProteinModelPortal:O64642 SMR:O64642 STRING:O64642
PaxDb:O64642 PRIDE:O64642 EnsemblPlants:AT2G45620.1 GeneID:819170
KEGG:ath:AT2G45620 TAIR:At2g45620 HOGENOM:HOG000114999
InParanoid:O64642 OMA:DINKSEM PhylomeDB:O64642
ProtClustDB:CLSN2688946 ArrayExpress:O64642 Genevestigator:O64642
Uniprot:O64642
Length = 764
Score = 1544 (548.6 bits), Expect = 2.0e-173, Sum P(2) = 2.0e-173
Identities = 303/484 (62%), Positives = 352/484 (72%)
Query: 221 GNSRRGFEHNVDM---INRFTSSAVEGGNGVGLTRQLDRPGPPSGSNLHSVSALDIXXXX 277
G + + +VD NR +++ + L++Q+D PGPP G++LHSVSA D
Sbjct: 274 GEHSKVWNQSVDFSAEANRLRGLSIQNESKFNLSQQIDHPGPPKGASLHSVSAADAADSF 333
Query: 278 XXXXXXXXXXXXXXXKRRENGPGYSQGG---DDMDDFGEDLVDSLLPDDESELKNDTHER 334
+ + +G D+++DFGED+V SLL +DE+ K+ +
Sbjct: 334 SMLNKEARRGGERREELGQLSKAKREGNANSDEIEDFGEDIVKSLLLEDETGEKDANDGK 393
Query: 335 NDKKHRNSRDKEIRSDNRGKRLLSQRMRNLKWQIECRADIGRLNAPFLAIYESLIPAXXX 394
D K SR+KE R DNRG+RLL Q+ R +K + CR DI R +A F+AIY+SLIPA
Sbjct: 394 KDSK--TSREKESRVDNRGQRLLGQKARMVKMYMACRNDIHRYDATFIAIYKSLIPAEEE 451
Query: 395 XXXXXXXXXXXXXXXXXXWPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLK 454
WP A+LYLYGSCANSFG KSDIDVCLAI +INKSE+LLK
Sbjct: 452 LEKQRQLMAHLENLVAKEWPHAKLYLYGSCANSFGFPKSDIDVCLAIEGDDINKSEMLLK 511
Query: 455 LADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVR 514
LA+IL+SDNLQNVQALTRARVPIVKLMDPVTGISCDICINN+LAVVNTKLLRDYAQIDVR
Sbjct: 512 LAEILESDNLQNVQALTRARVPIVKLMDPVTGISCDICINNVLAVVNTKLLRDYAQIDVR 571
Query: 515 LQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTV 574
L+QLAFIVKHWAKSR VN TYQGTLSSYAYVLMCIHFLQQRRP ILPCLQ ME TYSV V
Sbjct: 572 LRQLAFIVKHWAKSRRVNETYQGTLSSYAYVLMCIHFLQQRRPPILPCLQEMEPTYSVRV 631
Query: 575 DDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEK 634
D+I C YFD VD+L FGS N+E+I LVW FFNYWAY HDYA NV+SVRTGS + K+EK
Sbjct: 632 DNIRCTYFDNVDRLRNFGSNNRETIAELVWGFFNYWAYAHDYAYNVVSVRTGSILGKREK 691
Query: 635 DWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLFE 694
DWTRR+GNDRHLICIEDPFE +HDLGRVVDKFSI+VLREEFERAA IM DPNPC KL E
Sbjct: 692 DWTRRVGNDRHLICIEDPFETSHDLGRVVDKFSIRVLREEFERAARIMHQDPNPCAKLLE 751
Query: 695 PYVP 698
PY+P
Sbjct: 752 PYIP 755
Score = 163 (62.4 bits), Expect = 2.0e-173, Sum P(2) = 2.0e-173
Identities = 76/245 (31%), Positives = 91/245 (37%)
Query: 5 GGGESPLTPAC-NGGEFLLSLLXXXXXXXXXXXXXXXXXXXSLPNDPAVAAVGPTIN--F 61
GG E P P+ N GEFLLS+L S DPA+AA+GPT+N F
Sbjct: 4 GGAEPPAPPSSINAGEFLLSILHGSPSPSSQGPQHHQ----SFALDPAIAAIGPTVNNPF 59
Query: 62 QPQ-WPSNGCDXX---------XXXXXXXXXXNFLGFPQNPWASSSTENQ---QQRLLCE 108
P W SNG NFLGFPQ P S T NQ QR+ E
Sbjct: 60 PPSNWQSNGHRPSNHNPPSWPLAFSPPHNLSPNFLGFPQFP-PSPFTTNQFDGNQRVSPE 118
Query: 109 DFGRLGFSNANYAAXXXXXXXXXXXXX----XXXRFGSF-QVQPDSLLNLNHLENLKYNL 163
D RLGF A R F D+ +LN L N
Sbjct: 119 DAYRLGFPGTTNPAIQSMVQQQQQQQLPPPQSETRKLVFGSFSGDATQSLNGLHNGNLKY 178
Query: 164 DRNSQFDQPRASSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPPGFSNKARVGGSGNS 223
D N R + NS + NL + R HDL + G G S + G GN+
Sbjct: 179 DSNQHEQLMRHPQSTLSNSNMDPNLSHHRNHDLH---EQRG-----GHSGRGNWGHIGNN 230
Query: 224 RRGFE 228
RG +
Sbjct: 231 GRGLK 235
Score = 58 (25.5 bits), Expect = 2.5e-162, Sum P(2) = 2.5e-162
Identities = 40/158 (25%), Positives = 60/158 (37%)
Query: 86 LGFP--QNPWASSSTENQQQRLLC---EDFGRLGFSN-ANYAAXXXXXXXXXXXXXXXXR 139
LGFP NP S + QQQ+ L + +L F + + A +
Sbjct: 123 LGFPGTTNPAIQSMVQQQQQQQLPPPQSETRKLVFGSFSGDATQSLNGLHNGNLKYDSNQ 182
Query: 140 FGSFQVQPDSLLNLNHLE-NLKYNLDRNSQFDQPRASSISNPNSFLHRNLENSREHDLRL 198
P S L+ ++++ NL ++ RN + R S ++ H N R
Sbjct: 183 HEQLMRHPQSTLSNSNMDPNLSHH--RNHDLHEQRGGH-SGRGNWGHIG-NNGR------ 232
Query: 199 GKQHYGSTPPPGFSNKARVG----GSGNSRRGFEHNVD 232
G + PPPGFS+ R GS + RG N D
Sbjct: 233 GLKSTPPPPPPGFSSNQRGWDMSLGSKDDDRGMGRNHD 270
>DICTYBASE|DDB_G0278425 [details] [associations]
symbol:DDB_G0278425 species:44689 "Dictyostelium
discoideum" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909
dictyBase:DDB_G0278425 Pfam:PF03828 EMBL:AAFI02000023
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_642359.1
EnsemblProtists:DDB0205447 GeneID:8621564 KEGG:ddi:DDB_G0278425
InParanoid:Q54Y43 OMA:TEESINT Uniprot:Q54Y43
Length = 1090
Score = 611 (220.1 bits), Expect = 3.2e-64, Sum P(3) = 3.2e-64
Identities = 121/285 (42%), Positives = 178/285 (62%)
Query: 417 RLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLL-KLADILQSDNLQNVQALTRARV 475
+L+L+GS AN + DID+C+ I+ S S+V++ +LA++L+ + Q + A+ ARV
Sbjct: 794 KLHLFGSSANGMSLKNGDIDICMVIDQSSEGTSDVIIERLAEMLKINGFQKILAIPTARV 853
Query: 476 PIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTY 535
PIVK DP TG+SCDIC+NN LA+ NT+L++DY+ ID R++ L ++VK WAK R +N
Sbjct: 854 PIVKFKDPNTGLSCDICMNNRLAIYNTRLVQDYSMIDERMKPLVYVVKRWAKRRKINEPS 913
Query: 536 QGTLSSYAYVLMCIHFLQQRRPAILPCLQGME--------KTYS-----VTVDDIECAYF 582
GTLSSYAY+ + I FLQ R+P ILPCLQ + K Y V VD C Y+
Sbjct: 914 LGTLSSYAYINLVISFLQTRQPPILPCLQELANGPKLINGKEYGDLLPDVMVDGFNCKYY 973
Query: 583 DQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGN 642
+ + KL GFGS NKE++G LV+ FF ++ + + V+S+RTGS I K K W
Sbjct: 974 NDISKLVGFGSDNKETLGSLVFHFFQTYSREFSFMNQVVSIRTGSPIQKSSKTWESIAKK 1033
Query: 643 DRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPN 687
+ IEDPFE TH+L RVV++ ++ ++ E R +++ + N
Sbjct: 1034 SHYWFSIEDPFETTHNLARVVNRPNLSIIISELNRGYKLLSKNSN 1078
Score = 56 (24.8 bits), Expect = 3.2e-64, Sum P(3) = 3.2e-64
Identities = 19/96 (19%), Positives = 35/96 (36%)
Query: 152 NLNHLENLKYNLDRNSQFDQPRASSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPPGF 211
N N+ N N ++N+Q + I+N N+ H N H H+ +
Sbjct: 26 NNNNNNNNNNNNNKNNQNGVDNPNDINNGNNNSHHKKNNHHNHHYH---HHHNNNNNNNN 82
Query: 212 SNKARVGGSGNSRRGFEHNVDMINRFTSSAVEGGNG 247
+N + N+ +N + N ++ NG
Sbjct: 83 NNNNNNNSNNNNNNNSNNNNNNNNNNNNNNNNNNNG 118
Score = 50 (22.7 bits), Expect = 1.4e-63, Sum P(3) = 1.4e-63
Identities = 20/99 (20%), Positives = 38/99 (38%)
Query: 152 NLNHLENLKYNLDRNSQFDQPRASSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPPGF 211
N N+ N N + N+ + ++ +N N+ + N N H+ ++ T P
Sbjct: 79 NNNNNNNNNNNSNNNNNNNSNNNNNNNNNNNNNNNNNNNGHHHNNTQNNSNF--TYQPKT 136
Query: 212 SNKARVGGSGNSRRGFEHNVDMINRFTSSA-VEGGNGVG 249
+ + N+ N + IN ++ GN VG
Sbjct: 137 KKDHHIQNNNNNINNNNINNNNINNINNNINTNNGNEVG 175
Score = 43 (20.2 bits), Expect = 3.2e-64, Sum P(3) = 3.2e-64
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 313 EDLVDSL---LPDDESELKNDTHERNDKKHRNSRDKEI 347
ED+ SL ++ + N+ + N+K + NS + EI
Sbjct: 408 EDMFGSLRGATNNNNNNNNNNNNNNNNKNNNNSNNDEI 445
Score = 41 (19.5 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 10/53 (18%), Positives = 24/53 (45%)
Query: 322 DDESELKNDTHERNDKKHRNSRDKEIRSDNRGKRLLS-QRMRNLKWQIECRAD 373
++ S N+ + N+ + N+ + ++N G + Q N +Q + + D
Sbjct: 87 NNNSNNNNNNNSNNNNNNNNNNNNNNNNNNNGHHHNNTQNNSNFTYQPKTKKD 139
>UNIPROTKB|Q2KEW4 [details] [associations]
symbol:MGCH7_ch7g922 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
EMBL:CM000230 InterPro:IPR002058 GO:GO:0016779
ProteinModelPortal:Q2KEW4 Uniprot:Q2KEW4
Length = 1474
Score = 527 (190.6 bits), Expect = 6.2e-51, Sum P(2) = 6.2e-51
Identities = 105/273 (38%), Positives = 162/273 (59%)
Query: 413 WP--DARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP +++L+GS N SD+D+C+ + E+ E + +A +LQ ++ V +
Sbjct: 464 WPGHSIKVHLFGSSGNKLCSDDSDVDICITTDWKEL---ENVCMIAQLLQKRGMEKVVCV 520
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+ A+VPIVK+ DP G++CD+ +NN LA+ NT+++ Y +ID R++ LA IVKHW + R
Sbjct: 521 SSAKVPIVKIWDPELGLACDMNVNNTLALENTRMVLTYVEIDERVRTLAMIVKHWTRRRT 580
Query: 531 VN-VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDKLH 589
+N + GTLSSY ++ M I FLQ R P ILP L + D + D + KL
Sbjct: 581 INDAAFGGTLSSYTWICMIIAFLQLRDPPILPALHQNPHKKQTSKDGQPSEFADDLTKLR 640
Query: 590 GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICI 649
G+G +NKE++G L++ FF ++A+ DY +VISVR G ISK EK WT + N ++C+
Sbjct: 641 GYGGKNKETLGELLFHFFRFYAHEFDYDKSVISVRLGKLISKDEKGWTYTLNN---MLCV 697
Query: 650 EDPFEVTHDLGRVVDKFSIKVLREEFERAAEIM 682
E+PF +LG D S + L E RA +++
Sbjct: 698 EEPFNTIRNLGNTADDTSFRGLHLELRRAFDLI 730
Score = 45 (20.9 bits), Expect = 6.2e-51, Sum P(2) = 6.2e-51
Identities = 25/101 (24%), Positives = 34/101 (33%)
Query: 172 PRASSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPPGFSNKARVGGSGNSRRGFEHNV 231
P SS SN + R L + H + + ST P N+AR + + +N
Sbjct: 146 PECSSGSNARTTEGRTLPVLKYHIALEARTRFSSTKP----NQARPHSVYHQSQLLSYN- 200
Query: 232 DMINRFTSSAVEGGNGVGLTRQLDRPGPPSGSNLHSVSALD 272
F GG G GL P + VS D
Sbjct: 201 ---RLFAPGRAGGGGGGGLQGSPTAPAKSRSRSSSKVSNKD 238
>POMBASE|SPBC1685.06 [details] [associations]
symbol:cid11 "poly(A) polymerase Cid11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 PomBase:SPBC1685.06 Pfam:PF03828 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 EMBL:CU329671
GO:GO:0006397 GenomeReviews:CU329671_GR GO:GO:0003723 PIR:T39522
RefSeq:NP_595210.1 ProteinModelPortal:O74326
EnsemblFungi:SPBC1685.06.1 GeneID:2539762 KEGG:spo:SPBC1685.06
eggNOG:COG5260 OMA:ENNACER OrthoDB:EOG46QB1M NextBio:20800912
GO:GO:0004652 InterPro:IPR002058 Uniprot:O74326
Length = 478
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 108/284 (38%), Positives = 170/284 (59%)
Query: 415 DARL--YLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQALTR 472
DA+L +++GS N+ + +SD+DVC+ N S+ S +LA +L S ++ + ++R
Sbjct: 85 DAKLDLFVFGSTENNLAIQQSDVDVCIITNGSKYLNSTC--QLAQLLYSYGMKQIVCVSR 142
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGV- 531
ARVPIVK+ DP I CD+ INN +A +NTK+LR + ID R++ L I+K+WAK R +
Sbjct: 143 ARVPIVKIWDPQFDIHCDLNINNDVAKINTKMLRLFVSIDPRVRPLGLIIKYWAKQRALC 202
Query: 532 NVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDKLHGF 591
+ GT++SY M ++FLQ R P ILP + + ++ DD + F VD + GF
Sbjct: 203 DAAGSGTITSYTISCMLVNFLQTRNPPILPAMLDL-----MSNDDNKM--F--VDDIVGF 253
Query: 592 GSR---NKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLIC 648
+ NK S+GRL+ FF Y+ + +Y +V+SVR+G+ ++KQEK W + N +C
Sbjct: 254 KEKATLNKTSLGRLLIDFFYYYGFSFNYLDSVVSVRSGTVLNKQEKGWAMEVNNS---LC 310
Query: 649 IEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKL 692
+E+PF +L D S+K L+ EF+RA +M + N C +L
Sbjct: 311 VEEPFNTARNLANTADNPSVKGLQSEFQRAFRLMSEN-NACERL 353
>POMBASE|SPAC821.04c [details] [associations]
symbol:cid13 "poly(A) polymerase Cid13" species:4896
"Schizosaccharomyces pombe" [GO:0003730 "mRNA 3'-UTR binding"
evidence=IC] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] [GO:0033314 "mitotic DNA replication
checkpoint" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC821.04c
Pfam:PF03828 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006378
GO:GO:0003730 GO:GO:0033314 eggNOG:COG5260 OrthoDB:EOG46QB1M
GO:GO:0004652 InterPro:IPR002058 PIR:T41715 RefSeq:NP_593157.1
ProteinModelPortal:Q9UT49 IntAct:Q9UT49 STRING:Q9UT49 PRIDE:Q9UT49
EnsemblFungi:SPAC821.04c.1 GeneID:2543204 KEGG:spo:SPAC821.04c
OMA:DICIIAP NextBio:20804227 Uniprot:Q9UT49
Length = 578
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 92/271 (33%), Positives = 158/271 (58%)
Query: 420 LYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQALTRARVPIVK 479
L+GS + + SDID+C+ + + + +++ + L+ V ++ A+VPIVK
Sbjct: 96 LFGSTQSLLASNASDIDLCIITDPPQC--APTTCEVSAAFARNGLKKVVCISTAKVPIVK 153
Query: 480 LMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQG-T 538
+ D +SCD IN ++ +NT+L+R Y D R++ L ++K+WAK R +N +G T
Sbjct: 154 VWDSELQLSCDCNINKTISTLNTRLMRSYVLCDPRVRPLIVMIKYWAKRRCLNDAAEGGT 213
Query: 539 LSSYAYVLMCIHFLQQRRPAILPCLQGME--KTYSVTVDDIECAYFDQVDKLHGFGSRNK 596
L+SY M I+FLQ+R P ILP LQ + + S D ++ ++FD D +HGFG +N+
Sbjct: 214 LTSYTISCMVINFLQKRDPPILPSLQMLPHLQDSSTMTDGLDVSFFDDPDLVHGFGDKNE 273
Query: 597 ESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVT 656
ES+G L FF ++ Y DY V+S+R G+ +SK+ K W ++ N +C+E+PF +
Sbjct: 274 ESLGILFVEFFRFFGYLFDYEHFVLSIRHGTFLSKRAKGWQFQLNN---FLCVEEPFHTS 330
Query: 657 HDLGRVVDKFSIKVLREEFERAAEIMQHDPN 687
+L D+ ++K ++ EF R ++ ++ N
Sbjct: 331 RNLANTADEITMKGIQLEFRRVFRLLAYNCN 361
>POMBASE|SPAC19D5.03 [details] [associations]
symbol:cid1 "poly(A) polymerase Cid1" species:4896
"Schizosaccharomyces pombe" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IMP] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IDA] [GO:0071076 "RNA 3' uridylation" evidence=IDA]
InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC19D5.03 Pfam:PF03828
GO:GO:0005829 EMBL:CU329670 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0033314
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0043631 EMBL:AF105076
PIR:T37963 RefSeq:NP_594901.1 PDB:4E7X PDB:4E80 PDB:4E8F PDB:4EP7
PDB:4FH3 PDB:4FH5 PDB:4FHP PDB:4FHV PDB:4FHW PDB:4FHX PDB:4FHY
PDBsum:4E7X PDBsum:4E80 PDBsum:4E8F PDBsum:4EP7 PDBsum:4FH3
PDBsum:4FH5 PDBsum:4FHP PDBsum:4FHV PDBsum:4FHW PDBsum:4FHX
PDBsum:4FHY ProteinModelPortal:O13833 STRING:O13833
EnsemblFungi:SPAC19D5.03.1 GeneID:2542420 KEGG:spo:SPAC19D5.03
OMA:DMARIRG OrthoDB:EOG4S7P0J NextBio:20803478 GO:GO:0050265
GO:GO:0071076 Uniprot:O13833
Length = 405
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 103/299 (34%), Positives = 162/299 (54%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQALTRA 473
PDA L +GS + + SD+D+C+ + DS + + L+ + L ++ + + L RA
Sbjct: 81 PDAELVAFGSLESGLALKNSDMDLCVLM-DSRVQSDTIALQFYEELIAEGFEG-KFLQRA 138
Query: 474 RVPIVKLM-DPVTGIS----CDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKS 528
R+PI+KL D G CDI NN LA+ NT LL Y ++D RL+ + +VKHWAK
Sbjct: 139 RIPIIKLTSDTKNGFGASFQCDIGFNNRLAIHNTLLLSSYTKLDARLKPMVLLVKHWAKR 198
Query: 529 RGVNVTYQGTLSSYAYVLMCIHFL-QQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDK 587
+ +N Y GTLSSY YVLM +++L +P + P L VD + + D+++
Sbjct: 199 KQINSPYFGTLSSYGYVLMVLYYLIHVIKPPVFPNLLLSPLKQEKIVDGFDVGFDDKLED 258
Query: 588 LHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRT-GSTISKQEKDWTR-------- 638
+ S+N S+G L+ FF ++AY + V++ R ++KQEK WT
Sbjct: 259 IPP--SQNYSSLGSLLHGFFRFYAYKFEPREKVVTFRRPDGYLTKQEKGWTSATEHTGSA 316
Query: 639 -RIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHD--PNPCVKLFE 694
+I DR+++ IEDPFE++H++GR V + +R EF A+ ++ P P LFE
Sbjct: 317 DQIIKDRYILAIEDPFEISHNVGRTVSSSGLYRIRGEFMAASRLLNSRSYPIPYDSLFE 375
>UNIPROTKB|Q5VYS8 [details] [associations]
symbol:ZCCHC6 "Terminal uridylyltransferase 7" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IDA] [GO:0071044 "histone
mRNA catabolic process" evidence=IMP] [GO:0031123 "RNA 3'-end
processing" evidence=IDA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS00028 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265
EMBL:AL137849 GO:GO:0031123 KO:K13291 EMBL:AL832026 EMBL:AL832193
EMBL:BX641077 EMBL:CR933643 EMBL:CR933644 EMBL:CR936608
EMBL:AL353678 EMBL:BC032456 EMBL:AK023471 EMBL:AK055546
EMBL:AK055948 EMBL:AB051498 IPI:IPI00336000 IPI:IPI00374531
IPI:IPI00552923 IPI:IPI00604491 IPI:IPI00604635 IPI:IPI00604680
RefSeq:NP_001171988.1 RefSeq:NP_001172003.1 RefSeq:NP_078893.2
UniGene:Hs.597057 ProteinModelPortal:Q5VYS8 SMR:Q5VYS8
IntAct:Q5VYS8 PhosphoSite:Q5VYS8 DMDM:67462100 PaxDb:Q5VYS8
PRIDE:Q5VYS8 DNASU:79670 Ensembl:ENST00000277141
Ensembl:ENST00000375957 Ensembl:ENST00000375960
Ensembl:ENST00000375961 Ensembl:ENST00000375963 GeneID:79670
KEGG:hsa:79670 UCSC:uc004aoq.3 UCSC:uc004aot.3 UCSC:uc004aov.3
UCSC:uc004aow.3 CTD:79670 GeneCards:GC09M088902 H-InvDB:HIX0008144
HGNC:HGNC:25817 HPA:HPA020615 HPA:HPA020620 neXtProt:NX_Q5VYS8
PharmGKB:PA134971144 InParanoid:Q5VYS8 OMA:KYFALPH ChiTaRS:ZCCHC6
GenomeRNAi:79670 NextBio:68893 ArrayExpress:Q5VYS8 Bgee:Q5VYS8
CleanEx:HS_ZCCHC6 Genevestigator:Q5VYS8 GermOnline:ENSG00000083223
Uniprot:Q5VYS8
Length = 1495
Score = 420 (152.9 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 96/259 (37%), Positives = 151/259 (58%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKS----EVLLKLADILQSDN-LQNV 467
+P +L L+GS N FG +SD+DVC+ IN E + + +LA +L+ + L+N+
Sbjct: 1037 FPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLRKHSGLRNI 1096
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K
Sbjct: 1097 LPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTK 1156
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQ 584
+ +G+LSSYAY LM ++FLQQR P ++P LQ + EK + VD +FDQ
Sbjct: 1157 MCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQ 1216
Query: 585 VDKLHGFGS---RNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIG 641
+D+L + S +N ES+G+L ++ D+ +VIS+R S ++ +K WT +
Sbjct: 1217 IDELPTYWSECGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKY- 1275
Query: 642 NDRHLICIEDPFEVTHDLG 660
I IEDPF++ H+LG
Sbjct: 1276 -----IVIEDPFDLNHNLG 1289
Score = 209 (78.6 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 58/198 (29%), Positives = 96/198 (48%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQ-SDNLQNVQALTR 472
PD L LYGS + G SD+++ + + +++ +VLL + + L+ SD+ +V A
Sbjct: 332 PDCSLRLYGSSCSRLGFKNSDVNIDIQF-PAIMSQPDVLLLVQECLKNSDSFIDVDADFH 390
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
ARVP+V + +G+ C + N A + TK L +++ +L L ++WAK ++
Sbjct: 391 ARVPVVVCREKQSGLLCKVSAGNENACLTTKHLTALGKLEPKLVPLVIAFRYWAKLCSID 450
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG-------MEKTYSVTVDDIE--CAYFD 583
+G L Y + LM I FLQQR+ +LP G + K + + DIE ++
Sbjct: 451 RPEEGGLPPYVFALMAIFFLQQRKEPLLPVYLGSWIEGFSLSKLGNFNLQDIEKDVVIWE 510
Query: 584 QVDKLHGFGSRNKESIGR 601
D G KE R
Sbjct: 511 HTDSAAGDTGITKEEAPR 528
Score = 83 (34.3 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 599 IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
+G+L ++A + A VIS+R +S++ KDW ++ I IEDP+ V +
Sbjct: 551 VGQLWVELLRFYALEFNLADLVISIRVKELVSRELKDWPKK------RIAIEDPYSVKRN 604
Query: 659 LGRVVD 664
+ R ++
Sbjct: 605 VARTLN 610
Score = 49 (22.3 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 22/62 (35%), Positives = 29/62 (46%)
Query: 186 RNLENSREHDLRLGKQHYGSTPPPGFS---NKARVGGSGNSRRGFEHNVDMINRFTSSAV 242
RN E+ DL G Q+ + G + NKA + G S G E D +N FT S V
Sbjct: 779 RNNESESTLDLE-GFQNPTAKECEGLATLDNKADL--DGESTEGTEELEDSLNHFTHS-V 834
Query: 243 EG 244
+G
Sbjct: 835 QG 836
Score = 44 (20.5 bits), Expect = 3.4e-36, Sum P(2) = 3.4e-36
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 296 ENGPGYSQGGDDMDDFGEDL---VDSLLPDDESELKNDTHERNDKKHR---NSRDKE 346
E+ G + D ++ F + ++P DE E ++D E +++ R N R+ E
Sbjct: 815 ESTEGTEELEDSLNHFTHSVQGQTSEMIPSDEEE-EDDEEEEEEEEPRLTINQREDE 870
>UNIPROTKB|Q641A1 [details] [associations]
symbol:papd4-a "Poly(A) RNA polymerase GLD2-A" species:8355
"Xenopus laevis" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0043631 "RNA polyadenylation"
evidence=ISS] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0007275 GO:GO:0005524 GO:GO:0005737 GO:GO:0030154
GO:GO:0046872 GO:GO:0006397 GO:GO:0048477 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 KO:K14079 EMBL:BC082438
RefSeq:NP_001087892.1 UniGene:Xl.1354 ProteinModelPortal:Q641A1
GeneID:447753 KEGG:xla:447753 CTD:447753 Xenbase:XB-GENE-1217415
HOVERGEN:HBG097533 Uniprot:Q641A1
Length = 509
Score = 395 (144.1 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 93/280 (33%), Positives = 151/280 (53%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQS---DNLQNVQA 469
+P +RLYL GS N FG SD D+CL + + +N+ ++ +L L ++
Sbjct: 219 FPQSRLYLVGSSLNGFGTRISDADLCLVLKEEPMNQHTEATQILGLLHKLFYTRLSYIER 278
Query: 470 LT--RARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
L RA+VPIVK D V+G D+ +NN++ + NT LLR YA ++ R++ L ++K WA
Sbjct: 279 LQFIRAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYAYLESRVRPLVLVIKKWAN 338
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVD-DIECAYFDQVD 586
G+N +GTLSSY VLM +H+LQ ILP LQ K Y D ++
Sbjct: 339 HHGINDASRGTLSSYTLVLMVLHYLQTLPEPILPSLQ---KKYPECFDLSMQLNLVHHAP 395
Query: 587 K-LHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRH 645
+ + + S+N+ +G L+ F Y+A D++ ++ISVR G + + + D+ R
Sbjct: 396 RNIPPYLSKNETPLGDLLLGFLKYFAVEFDWSKDIISVREGKALPRSD-DYLWR----NK 450
Query: 646 LICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHD 685
IC+E+PF+ T+ V ++ ++R EF +A ++ D
Sbjct: 451 YICVEEPFDGTNTARAVYERQKFDMIRAEFLKAWGALRDD 490
>UNIPROTKB|E1BAR2 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 KO:K13291 CTD:79670 OMA:KYFALPH EMBL:DAAA02023954
IPI:IPI00721027 RefSeq:NP_001192681.1 UniGene:Bt.42314
Ensembl:ENSBTAT00000002277 GeneID:513209 KEGG:bta:513209
NextBio:20870748 Uniprot:E1BAR2
Length = 1498
Score = 420 (152.9 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 95/259 (36%), Positives = 151/259 (58%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAIND----SEINKSEVLLKLADILQSDN-LQNV 467
+P +L L+GS N FG +SD+DVC+ IN E++ + +LA +L+ + L+N+
Sbjct: 1040 FPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEELDCVRTIEELARVLKKHSGLRNI 1099
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K
Sbjct: 1100 LPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTK 1159
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQ 584
+ +G+LSSYAY LM ++FLQQR P ++P LQ + EK + VD +FDQ
Sbjct: 1160 MCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQ 1219
Query: 585 VDKLHGFG---SRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIG 641
+D+L + +N ES+G+L ++ D+ +VIS+R S ++ +K WT +
Sbjct: 1220 IDELPNYWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKY- 1278
Query: 642 NDRHLICIEDPFEVTHDLG 660
I IEDPF++ H+LG
Sbjct: 1279 -----IVIEDPFDLNHNLG 1292
Score = 201 (75.8 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 48/153 (31%), Positives = 81/153 (52%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQS-DNLQNVQALTR 472
PD L LYGS + G SDI++ + + +++ +VLL + + L++ D+ +V A
Sbjct: 332 PDCSLRLYGSSCSRLGFKNSDINIDIQF-PAIMSQPDVLLLVQECLKNNDSFIDVDADFH 390
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
ARVP+V + +G+ C + N A + T L +++ +L L ++WAK ++
Sbjct: 391 ARVPVVVCREKQSGLLCKVSAGNENACLTTNHLTALGKLESKLVPLVIAFRYWAKLCSID 450
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G L Y + LM I FLQQR+ +LP G
Sbjct: 451 RPEEGGLPPYVFALMAIFFLQQRKEPLLPVYLG 483
Score = 93 (37.8 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 591 FGSRNKES--IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLIC 648
F S+ + S IG+L ++A + A VIS+R +IS++ KDW ++ I
Sbjct: 541 FDSKQQPSVPIGQLWVELLRFYALEFNLADLVISIRVKESISRESKDWPKK------RIA 594
Query: 649 IEDPFEVTHDLGRVVD 664
IEDP+ + ++ R ++
Sbjct: 595 IEDPYSIKRNVARTLN 610
Score = 40 (19.1 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 676 ERAAEIMQHDP 686
ER+ EI +HDP
Sbjct: 652 ERSKEIAKHDP 662
>UNIPROTKB|E2RM29 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 EMBL:AAEX03000505 Ensembl:ENSCAFT00000002070
NextBio:20851989 Uniprot:E2RM29
Length = 1497
Score = 416 (151.5 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 95/259 (36%), Positives = 150/259 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKS----EVLLKLADILQSDN-LQNV 467
+P +L L+GS N FG +SD+DVC+ IN E + + +LA +L+ + L+N+
Sbjct: 1039 FPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLKKHSGLRNI 1098
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K
Sbjct: 1099 LPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTK 1158
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQ 584
+ +G+LSSYAY LM ++FLQQR P ++P LQ + EK + VD +FDQ
Sbjct: 1159 MCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQ 1218
Query: 585 VDKLHGFG---SRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIG 641
+D+L + +N ES+G+L ++ D+ +VIS+R S ++ +K WT +
Sbjct: 1219 IDELPTYWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKY- 1277
Query: 642 NDRHLICIEDPFEVTHDLG 660
I IEDPF++ H+LG
Sbjct: 1278 -----IVIEDPFDLNHNLG 1291
Score = 199 (75.1 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 47/153 (30%), Positives = 81/153 (52%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQ-SDNLQNVQALTR 472
PD L LYGS + G SD+++ + + +++ +VLL + + L+ S++ +V A
Sbjct: 332 PDCSLRLYGSSCSRLGFKNSDVNIDIQF-PAIMSQPDVLLLVQECLKNSESFIDVDADFH 390
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
ARVP+V + +G+ C + N A + T L +++ +L L ++WAK ++
Sbjct: 391 ARVPVVVCKEKQSGLLCKVSAGNENACLTTNHLTALGKLESKLVPLVIAFRYWAKLCSID 450
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G L Y + LM I FLQQR+ +LP G
Sbjct: 451 HPEEGGLPPYVFALMAIFFLQQRKEPLLPVYLG 483
Score = 81 (33.6 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 599 IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
+G+L ++A + A VIS+R ++S++ KDW ++ R I + DP+ V +
Sbjct: 551 VGQLWVEMLRFYALEFNLADLVISIRVKESVSRELKDWPKK----RIAIEVTDPYSVKRN 606
Query: 659 LGRVVD 664
+ R ++
Sbjct: 607 VARTLN 612
Score = 40 (19.1 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 11/47 (23%), Positives = 17/47 (36%)
Query: 300 GYSQGGDDMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKE 346
G G DD+ ED + P E H +++ D+E
Sbjct: 819 GIEGGTDDL----EDALSHFTPSREGRTSGILHSDEEEEEEEEDDEE 861
>UNIPROTKB|J9P044 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR002058 GeneTree:ENSGT00550000074490
OMA:KYFALPH EMBL:AAEX03000505 Ensembl:ENSCAFT00000049711
Uniprot:J9P044
Length = 1542
Score = 416 (151.5 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 95/259 (36%), Positives = 150/259 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKS----EVLLKLADILQSDN-LQNV 467
+P +L L+GS N FG +SD+DVC+ IN E + + +LA +L+ + L+N+
Sbjct: 1037 FPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLKKHSGLRNI 1096
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K
Sbjct: 1097 LPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTK 1156
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQ 584
+ +G+LSSYAY LM ++FLQQR P ++P LQ + EK + VD +FDQ
Sbjct: 1157 MCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQ 1216
Query: 585 VDKLHGFG---SRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIG 641
+D+L + +N ES+G+L ++ D+ +VIS+R S ++ +K WT +
Sbjct: 1217 IDELPTYWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKY- 1275
Query: 642 NDRHLICIEDPFEVTHDLG 660
I IEDPF++ H+LG
Sbjct: 1276 -----IVIEDPFDLNHNLG 1289
Score = 199 (75.1 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 47/153 (30%), Positives = 81/153 (52%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQ-SDNLQNVQALTR 472
PD L LYGS + G SD+++ + + +++ +VLL + + L+ S++ +V A
Sbjct: 332 PDCSLRLYGSSCSRLGFKNSDVNIDIQF-PAIMSQPDVLLLVQECLKNSESFIDVDADFH 390
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
ARVP+V + +G+ C + N A + T L +++ +L L ++WAK ++
Sbjct: 391 ARVPVVVCKEKQSGLLCKVSAGNENACLTTNHLTALGKLESKLVPLVIAFRYWAKLCSID 450
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G L Y + LM I FLQQR+ +LP G
Sbjct: 451 HPEEGGLPPYVFALMAIFFLQQRKEPLLPVYLG 483
Score = 85 (35.0 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 599 IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
+G+L ++A + A VIS+R ++S++ KDW ++ I IEDP+ V +
Sbjct: 551 VGQLWVEMLRFYALEFNLADLVISIRVKESVSRELKDWPKK------RIAIEDPYSVKRN 604
Query: 659 LGRVVD 664
+ R ++
Sbjct: 605 VARTLN 610
Score = 40 (19.1 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 11/47 (23%), Positives = 17/47 (36%)
Query: 300 GYSQGGDDMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKE 346
G G DD+ ED + P E H +++ D+E
Sbjct: 817 GIEGGTDDL----EDALSHFTPSREGRTSGILHSDEEEEEEEEDDEE 859
>ZFIN|ZDB-GENE-050522-536 [details] [associations]
symbol:papd4 "PAP associated domain containing 4"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS] [GO:0043631 "RNA
polyadenylation" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
ZFIN:ZDB-GENE-050522-536 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 KO:K14079 HOVERGEN:HBG097533 CTD:167153
HOGENOM:HOG000088606 OrthoDB:EOG4P2Q22 EMBL:BC095312
IPI:IPI00607291 RefSeq:NP_001018436.1 UniGene:Dr.75639
ProteinModelPortal:Q503I9 GeneID:553626 KEGG:dre:553626
InParanoid:Q503I9 NextBio:20880363 Uniprot:Q503I9
Length = 489
Score = 383 (139.9 bits), Expect = 5.3e-35, P = 5.3e-35
Identities = 94/279 (33%), Positives = 144/279 (51%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSE----VLLKLADILQSDNLQNVQ 468
+P A+++L GS N FG SD D+CL I + +N + VL + +L +
Sbjct: 198 FPCAKVFLGGSSLNGFGSRSSDADLCLVIEEGPVNHRKDAVYVLSLVRKLLYKLSYIEKP 257
Query: 469 ALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKS 528
L RA+VPIVK D ++G+ D+ NN + + NT LLR YA ++ R++ L ++K WA
Sbjct: 258 QLIRAKVPIVKFRDRISGVEFDLNFNNTVGIRNTFLLRTYAFVEKRVRPLVLVIKKWANH 317
Query: 529 RGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVD---DIECAYFDQV 585
+N +GTLSSY VLM +H+LQ ++PCLQ + Y D DI
Sbjct: 318 HCINDASRGTLSSYTLVLMVLHYLQTLPEPVIPCLQ---RDYPTCFDPKMDIHLVPSGPS 374
Query: 586 DKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQE-KDWTRRIGNDR 644
D + F SRN+ S+G L F Y+A + VISVR T+ K K+W D+
Sbjct: 375 D-IPAFVSRNQSSLGDLFLGFLRYYATVFKWDKQVISVRMARTLPKSNCKEW-----KDK 428
Query: 645 HLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQ 683
IC+E+PF T+ V ++ + ++ F + ++Q
Sbjct: 429 -FICVEEPFNRTNTARAVHERMKFEAIKAAFIESHRLLQ 466
>UNIPROTKB|K7GM92 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058
GeneTree:ENSGT00550000074490 EMBL:CU694299 RefSeq:XP_003130685.2
Ensembl:ENSSSCT00000035632 GeneID:100516638 Uniprot:K7GM92
Length = 1497
Score = 416 (151.5 bits), Expect = 7.3e-35, Sum P(3) = 7.3e-35
Identities = 95/259 (36%), Positives = 150/259 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKS----EVLLKLADILQSDN-LQNV 467
+P +L L+GS N FG +SD+DVC+ IN E + + +LA +L+ + L+N+
Sbjct: 1040 FPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLKKHSGLRNI 1099
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K
Sbjct: 1100 LPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTK 1159
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQ 584
+ +G+LSSYAY LM ++FLQQR P ++P LQ + EK + VD +FDQ
Sbjct: 1160 MCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKGEKKPEIFVDGWNIYFFDQ 1219
Query: 585 VDKLHGFG---SRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIG 641
+D+L + +N ES+G+L ++ D+ +VIS+R S ++ +K WT +
Sbjct: 1220 IDELPTYWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKY- 1278
Query: 642 NDRHLICIEDPFEVTHDLG 660
I IEDPF++ H+LG
Sbjct: 1279 -----IVIEDPFDLNHNLG 1292
Score = 208 (78.3 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 49/153 (32%), Positives = 81/153 (52%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQ-SDNLQNVQALTR 472
PD L LYGS + G SD+++ + + +++ +VLL + + L+ SD+ +V A
Sbjct: 331 PDCSLRLYGSSCSRLGFKTSDVNIDIQF-PAIMSQPDVLLLVQECLKNSDSFIDVDADFH 389
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
ARVP+V + +G+ C + N A + T L +++ +L L +HWAK ++
Sbjct: 390 ARVPVVVCREKQSGLLCKVSAGNENACLTTNHLTALGKLESKLVPLVIAFRHWAKLCSID 449
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G L Y + LM I FLQQR+ +LP G
Sbjct: 450 RPEEGGLPPYVFALMAIFFLQQRKEPLLPVYLG 482
Score = 88 (36.0 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 599 IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
+G+L ++A + A VIS+R ++S++ KDW ++ I IEDP+ V +
Sbjct: 550 VGQLWVELLRFYALEFNLADLVISIRVKESVSRESKDWPKK------RIAIEDPYSVKRN 603
Query: 659 LGRVVD 664
+ R ++
Sbjct: 604 VARTLN 609
Score = 39 (18.8 bits), Expect = 7.3e-35, Sum P(3) = 7.3e-35
Identities = 9/44 (20%), Positives = 16/44 (36%)
Query: 313 EDLVDSLLPDDESELKNDTH---ERNDKKHRNSRDKEIRSDNRG 353
ED + P + + TH E D++ + + RG
Sbjct: 829 EDTLSHFTPSGQDQTSGITHSDEEEEDEEEEEEEEPRLSISQRG 872
Score = 39 (18.8 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 676 ERAAEIMQHDP 686
ER+ E+ +HDP
Sbjct: 651 ERSKEVAKHDP 661
Score = 38 (18.4 bits), Expect = 9.3e-35, Sum P(3) = 9.3e-35
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 322 DDESELK---NDTHERNDKKHRNSRDKEIRSDNR 352
DD ++K +T +N+K+ K S +R
Sbjct: 733 DDREDVKVPRQETRSKNEKEENGKEGKHPLSTDR 766
Score = 37 (18.1 bits), Expect = 7.3e-35, Sum P(3) = 7.3e-35
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 88 FPQNPWASSSTENQQQRLLCEDFG 111
+ Q W + + ++Q +R L ++ G
Sbjct: 84 YSQPVWITDNHKDQSKRWLSDELG 107
>MGI|MGI:2387179 [details] [associations]
symbol:Zcchc6 "zinc finger, CCHC domain containing 6"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO] InterPro:IPR001878
InterPro:IPR015880 Pfam:PF00098 PROSITE:PS00028 PROSITE:PS50158
SMART:SM00343 SMART:SM00355 MGI:MGI:2387179 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:4.10.60.10 SUPFAM:SSF57756 eggNOG:COG5260 InterPro:IPR002058
GO:GO:0050265 GO:GO:0031123 KO:K13291 CTD:79670 EMBL:BC023880
EMBL:BC043111 EMBL:BC023438 EMBL:AK031043 IPI:IPI00262966
RefSeq:NP_705766.3 UniGene:Mm.233082 ProteinModelPortal:Q5BLK4
SMR:Q5BLK4 PhosphoSite:Q5BLK4 PaxDb:Q5BLK4 PRIDE:Q5BLK4
GeneID:214290 KEGG:mmu:214290 UCSC:uc007qvf.1 HOGENOM:HOG000155767
InParanoid:A1A4B1 OrthoDB:EOG40VVNP NextBio:374248
CleanEx:MM_ZCCHC6 Genevestigator:Q5BLK4
GermOnline:ENSMUSG00000035248 Uniprot:Q5BLK4
Length = 1491
Score = 404 (147.3 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 94/260 (36%), Positives = 150/260 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKS----EVLLKLADILQSDN-LQNV 467
+P +L L+GS N FG +SD+DVC+ IN E + + +LA +L+ + L+N+
Sbjct: 1033 FPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEGLDCVRTIEELARVLRKHSGLRNI 1092
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K
Sbjct: 1093 LPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTK 1152
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQ 584
+ +G+LSSYAY LM ++FLQQR P ++P LQ + EK + VD +FDQ
Sbjct: 1153 MCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYKGEKKPEILVDGWNIYFFDQ 1212
Query: 585 VDKLHG----FGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRI 640
+++L +G +N E +G+L ++ D+ +VIS+R S ++ +K WT +
Sbjct: 1213 INELPTCWPEYG-KNTEPVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKY 1271
Query: 641 GNDRHLICIEDPFEVTHDLG 660
I IEDPF++ H+LG
Sbjct: 1272 ------IVIEDPFDLNHNLG 1285
Score = 210 (79.0 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 50/153 (32%), Positives = 82/153 (53%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQ-SDNLQNVQALTR 472
PD L LYGS + G SD+++ + + +++ +VLL + + L+ SD+ +V A
Sbjct: 332 PDCSLRLYGSSCSRLGFRDSDVNIDVQF-PAVMSQPDVLLLVQECLKNSDSFIDVDADFH 390
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
ARVP+V D +G+ C + N A + TK L +++ RL L ++WAK ++
Sbjct: 391 ARVPVVVCRDKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLVPLVIAFRYWAKLCSID 450
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G L Y + LM + FLQQR+ +LP G
Sbjct: 451 RPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLG 483
Score = 87 (35.7 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 599 IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
+G+L ++A + A VIS+R IS++ KDW ++ I IEDP+ V +
Sbjct: 551 VGQLWVELLRFYALEFNLADLVISIRVKELISRESKDWPKK------RIAIEDPYSVKRN 604
Query: 659 LGRVVD 664
+ R ++
Sbjct: 605 VARTLN 610
>UNIPROTKB|E9PKY2 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002934 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0008270 GO:GO:0003676 EMBL:AL513218
InterPro:IPR002058 GO:GO:0016779 EMBL:AL138849 HGNC:HGNC:28981
ChiTaRS:ZCCHC11 EMBL:AL591167 IPI:IPI00975609
ProteinModelPortal:E9PKY2 SMR:E9PKY2 Ensembl:ENST00000528642
ArrayExpress:E9PKY2 Bgee:E9PKY2 Uniprot:E9PKY2
Length = 1203
Score = 403 (146.9 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 97/272 (35%), Positives = 150/272 (55%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA IL+ L+N+ +
Sbjct: 920 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI 979
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 980 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCD 1039
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT---VDDIECAYFDQVDK 587
+ +G+LSSYAY+LM ++FLQQR+P ++P LQ + + VD +FD+ ++
Sbjct: 1040 IGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEE 1099
Query: 588 LH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGND 643
L G +N ES+G L ++ D+ VIS+R ++ EK WT +
Sbjct: 1100 LKKRLPSLG-KNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKC--- 1155
Query: 644 RHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
I IEDPF++ H+LG V + + + F
Sbjct: 1156 ---IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1184
Score = 219 (82.2 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 49/153 (32%), Positives = 84/153 (54%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ-NVQALTR 472
P+ L LYGS F + SD+++ + ++N ++L+K+ IL+ + L +V++
Sbjct: 392 PECSLRLYGSSLTRFALKSSDVNIDIKF-PPKMNHPDLLIKVLGILKKNVLYVDVESDFH 450
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VP+V D +G+ C + N +A + T LL +I+ L ++WAK ++
Sbjct: 451 AKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYID 510
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
G + SY + LM + FLQQR+P +LPCL G
Sbjct: 511 SQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLG 543
Score = 78 (32.5 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 595 NKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFE 654
N+ S+G+L ++ VI VR ++++ K+W +R I IEDPF
Sbjct: 554 NRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKR------RIAIEDPFS 607
Query: 655 VTHDLGRVVDKFSI-KVLREEFERAA 679
V ++ R ++ + + + E F RAA
Sbjct: 608 VKRNVARSLNSQLVYEYVVERF-RAA 632
Score = 44 (20.5 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 307 DMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRD 344
D DD + D + DD S++KND E N K++ + D
Sbjct: 224 DSDDSASGIED--VSDDLSKMKND--ESN-KENSSEMD 256
>MGI|MGI:2445126 [details] [associations]
symbol:Zcchc11 "zinc finger, CCHC domain containing 11"
species:10090 "Mus musculus" [GO:0001816 "cytokine production"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0010586 "miRNA metabolic
process" evidence=IMP] [GO:0010587 "miRNA catabolic process"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=ISO] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0031054 "pre-miRNA processing"
evidence=ISO] [GO:0031123 "RNA 3'-end processing" evidence=ISO;IDA]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IDA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO;IDA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IMP]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 MGI:MGI:2445126 Pfam:PF03828
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0032755 GO:GO:0003676 GO:GO:0031054 GO:GO:0032088
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827 GO:GO:0001816
EMBL:AL626783 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265
GO:GO:0070102 EMBL:AL627238 GeneTree:ENSGT00550000074490
GO:GO:0010587 GO:GO:0031123 GO:GO:0031664 CTD:23318 KO:K13291
ChiTaRS:ZCCHC11 EMBL:BC150791 EMBL:AK220327 EMBL:AK134388
IPI:IPI00648042 RefSeq:NP_780681.2 UniGene:Mm.25181
UniGene:Mm.446602 ProteinModelPortal:B2RX14 SMR:B2RX14
DIP:DIP-48571N STRING:B2RX14 PhosphoSite:B2RX14 PaxDb:B2RX14
PRIDE:B2RX14 Ensembl:ENSMUST00000043368 Ensembl:ENSMUST00000155068
GeneID:230594 KEGG:mmu:230594 UCSC:uc008ubd.1 HOGENOM:HOG000231134
InParanoid:A2A8R8 NextBio:379961 Bgee:B2RX14 Genevestigator:B2RX14
Uniprot:B2RX14
Length = 1644
Score = 403 (146.9 bits), Expect = 3.1e-34, P = 3.1e-34
Identities = 97/272 (35%), Positives = 150/272 (55%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA IL+ L+N+ +
Sbjct: 1008 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI 1067
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 1068 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCD 1127
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT---VDDIECAYFDQVDK 587
+ +G+LSSYAY+LM ++FLQQR+P ++P LQ + + VD +FD+ ++
Sbjct: 1128 IGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEE 1187
Query: 588 LH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGND 643
L G +N ES+G L ++ D+ VIS+R ++ EK WT +
Sbjct: 1188 LKKRLPSLG-KNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKC--- 1243
Query: 644 RHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
I IEDPF++ H+LG V + + + F
Sbjct: 1244 ---IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1272
Score = 211 (79.3 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 46/153 (30%), Positives = 82/153 (53%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ-NVQALTR 472
P+ L LYGS F + SD+++ + ++N ++L+++ IL+ L +V++
Sbjct: 412 PECSLRLYGSSLTKFALKSSDVNIDIKF-PPKMNHPDLLIQVLGILKKSALYIDVESDFH 470
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VP+V D + + C + N +A + T LL +++ L ++WAK ++
Sbjct: 471 AKVPVVVCKDRKSALLCRVSAGNDMACLTTDLLAALGKVEPVFTPLVLAFRYWAKLCYID 530
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
G + SY + LM + FLQQR+P +LPCL G
Sbjct: 531 SQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLG 563
Score = 72 (30.4 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 595 NKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFE 654
N+ +G+L ++ VI VR ++++ K+W +R I IEDPF
Sbjct: 645 NQVPLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKR------RIAIEDPFS 698
Query: 655 VTHDLGRVVDKFSI-KVLREEFERAA 679
V ++ R ++ + + + E F RAA
Sbjct: 699 VKRNVARSLNSQLVYEYVVERF-RAA 723
>UNIPROTKB|I3L9X5 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR002934
Pfam:PF00098 Pfam:PF01909 PROSITE:PS50158 SMART:SM00343
Pfam:PF03828 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00550000074490 OMA:TDCRSNL EMBL:CU929620
Ensembl:ENSSSCT00000029203 Uniprot:I3L9X5
Length = 1168
Score = 400 (145.9 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 96/272 (35%), Positives = 150/272 (55%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA IL+ L+N+ +
Sbjct: 755 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI 814
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 815 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCD 874
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT---VDDIECAYFDQVDK 587
+ +G+LSSYAY+LM ++FLQQR+P ++P LQ + + VD +FD+ ++
Sbjct: 875 IGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEE 934
Query: 588 LH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGND 643
L G +N E++G L ++ D+ VIS+R ++ EK WT +
Sbjct: 935 LKKRLPSLG-KNTETLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKC--- 990
Query: 644 RHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
I IEDPF++ H+LG V + + + F
Sbjct: 991 ---IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1019
Score = 203 (76.5 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 46/153 (30%), Positives = 82/153 (53%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ-NVQALTR 472
P+ L LYGS F + SD+++ + ++N ++L+++ IL+ L +V++
Sbjct: 105 PECSLRLYGSSLTKFALKSSDVNIDIKF-PPKMNHPDLLIQVLGILKKSVLYLDVESDFH 163
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VP+V D +G+ C + N +A + T LL +++ L ++WAK ++
Sbjct: 164 AKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLAALGKMEPVFIPLVLAFRYWAKLCYID 223
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
G + SY + LM + FLQQR+ +LPCL G
Sbjct: 224 SQTDGGIPSYCFALMVMFFLQQRKHPLLPCLLG 256
Score = 77 (32.2 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 595 NKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFE 654
N+ S+G+L ++ VI VR ++++ K+W +R I IEDPF
Sbjct: 318 NQVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKR------RIAIEDPFS 371
Query: 655 VTHDLGRVVDKFSI-KVLREEFERAA 679
V ++ R ++ + + + E F RAA
Sbjct: 372 VKRNVARSLNSQLVYEYVVERF-RAA 396
>UNIPROTKB|F1S6H9 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070102 "interleukin-6-mediated signaling pathway"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IEA] [GO:0019827 "stem
cell maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019827 GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 InterPro:IPR025829 Pfam:PF13696 EMBL:CU929620
Ensembl:ENSSSCT00000004271 Uniprot:F1S6H9
Length = 1363
Score = 400 (145.9 bits), Expect = 5.1e-34, P = 5.1e-34
Identities = 96/272 (35%), Positives = 150/272 (55%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA IL+ L+N+ +
Sbjct: 709 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI 768
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 769 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCD 828
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT---VDDIECAYFDQVDK 587
+ +G+LSSYAY+LM ++FLQQR+P ++P LQ + + VD +FD+ ++
Sbjct: 829 IGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEE 888
Query: 588 LH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGND 643
L G +N E++G L ++ D+ VIS+R ++ EK WT +
Sbjct: 889 LKKRLPSLG-KNTETLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKC--- 944
Query: 644 RHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
I IEDPF++ H+LG V + + + F
Sbjct: 945 ---IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 973
Score = 203 (76.5 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 46/153 (30%), Positives = 82/153 (53%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ-NVQALTR 472
P+ L LYGS F + SD+++ + ++N ++L+++ IL+ L +V++
Sbjct: 108 PECSLRLYGSSLTKFALKSSDVNIDIKF-PPKMNHPDLLIQVLGILKKSVLYLDVESDFH 166
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VP+V D +G+ C + N +A + T LL +++ L ++WAK ++
Sbjct: 167 AKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLAALGKMEPVFIPLVLAFRYWAKLCYID 226
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
G + SY + LM + FLQQR+ +LPCL G
Sbjct: 227 SQTDGGIPSYCFALMVMFFLQQRKHPLLPCLLG 259
Score = 77 (32.2 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 595 NKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFE 654
N+ S+G+L ++ VI VR ++++ K+W +R I IEDPF
Sbjct: 341 NQVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKR------RIAIEDPFS 394
Query: 655 VTHDLGRVVDKFSI-KVLREEFERAA 679
V ++ R ++ + + + E F RAA
Sbjct: 395 VKRNVARSLNSQLVYEYVVERF-RAA 419
>RGD|1586015 [details] [associations]
symbol:Zcchc6 "zinc finger, CCHC domain containing 6"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA;ISO] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA;ISO] [GO:0071044
"histone mRNA catabolic process" evidence=ISO] InterPro:IPR001878
InterPro:IPR002934 InterPro:IPR015880 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 SMART:SM00355 Pfam:PF03828
RGD:1586015 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0050265
GO:GO:0031123 OrthoDB:EOG40VVNP IPI:IPI00211280
Ensembl:ENSRNOT00000067726 UCSC:RGD:1586015 ArrayExpress:D3ZL68
Uniprot:D3ZL68
Length = 1485
Score = 406 (148.0 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 95/260 (36%), Positives = 151/260 (58%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKS----EVLLKLADILQSDN-LQNV 467
+P +L L+GS N FG +SD+DVC+ IN E + + +LA +L+ + L+N+
Sbjct: 1030 FPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEGLDCVRTIEELARVLRKHSGLRNI 1089
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K
Sbjct: 1090 LPITTAKVPIVKFSHLRSGLEVDISLYNTLALHNTRLLFAYSAIDPRVKYLCYTMKVFTK 1149
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQ 584
+ +G+LSSYAY LM ++FLQQR P ++P LQ + EK + VD +FDQ
Sbjct: 1150 MCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYKGEKKPEILVDGWNIYFFDQ 1209
Query: 585 VDKLHG----FGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRI 640
+++L +G +N ES+G+L ++ D+ +VIS+R S ++ +K WT +
Sbjct: 1210 INELPTCWPEYG-KNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKY 1268
Query: 641 GNDRHLICIEDPFEVTHDLG 660
I IEDPF++ H+LG
Sbjct: 1269 ------IVIEDPFDLNHNLG 1282
Score = 199 (75.1 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 49/153 (32%), Positives = 80/153 (52%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQ-SDNLQNVQALTR 472
PD L LYGS + G SD+++ + + +++ +VLL + + L+ SD +V A
Sbjct: 332 PDCSLRLYGSSCSRLGFRDSDVNIDVQF-PAVMSQPDVLLLVQECLKNSDCFIDVDADFH 390
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
ARVP+V +G+ C + N A + TK L +++ RL L ++WAK ++
Sbjct: 391 ARVPVVVCRHKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLLPLVIAFRYWAKLCSID 450
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G L Y + LM + FLQQR+ +LP G
Sbjct: 451 RPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLG 483
Score = 87 (35.7 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 599 IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
+G+L ++A + A VIS+R IS++ KDW ++ I IEDP+ V +
Sbjct: 551 VGQLWVELLRFYALEFNLADLVISIRVKELISRESKDWPKK------RIAIEDPYSVKRN 604
Query: 659 LGRVVD 664
+ R ++
Sbjct: 605 VARTLN 610
Score = 40 (19.1 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 305 GDDMDDFGEDLVDSLLPD-DESELKNDTH-ERN 335
G+D+++ GE + +LL D + LK ++ E N
Sbjct: 899 GEDLEESGEHMGGALLIDLNRITLKEESFFEEN 931
Score = 37 (18.1 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 320 LPDDESELKNDTHERNDKKHRN 341
L E LK D ER ++ RN
Sbjct: 217 LQQAEERLKRDCIERLKRRSRN 238
>UNIPROTKB|F1S4J1 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 OMA:KYFALPH EMBL:CU694299 Ensembl:ENSSSCT00000011987
Uniprot:F1S4J1
Length = 1497
Score = 409 (149.0 bits), Expect = 6.6e-34, Sum P(3) = 6.6e-34
Identities = 94/259 (36%), Positives = 149/259 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKS----EVLLKLADILQSDN-LQNV 467
+P +L L+GS N FG +SD+DVC+ IN E + + +LA +L+ + L+N+
Sbjct: 1040 FPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLKKHSGLRNI 1099
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+T A+VPIVK +G+ DI + N LA+ NT+LL Y+ ID R++ L + +K + K
Sbjct: 1100 LPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTK 1159
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFDQ 584
+ +G+LSSYAY LM ++FLQQR P ++P L + EK + VD +FDQ
Sbjct: 1160 MCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLLQIYKGEKKPEIFVDGWNIYFFDQ 1219
Query: 585 VDKLHGFG---SRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIG 641
+D+L + +N ES+G+L ++ D+ +VIS+R S ++ +K WT +
Sbjct: 1220 IDELPTYWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKY- 1278
Query: 642 NDRHLICIEDPFEVTHDLG 660
I IEDPF++ H+LG
Sbjct: 1279 -----IVIEDPFDLNHNLG 1292
Score = 208 (78.3 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 49/153 (32%), Positives = 81/153 (52%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQ-SDNLQNVQALTR 472
PD L LYGS + G SD+++ + + +++ +VLL + + L+ SD+ +V A
Sbjct: 331 PDCSLRLYGSSCSRLGFKTSDVNIDIQF-PAIMSQPDVLLLVQECLKNSDSFIDVDADFH 389
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
ARVP+V + +G+ C + N A + T L +++ +L L +HWAK ++
Sbjct: 390 ARVPVVVCREKQSGLLCKVSAGNENACLTTNHLTALGKLESKLVPLVIAFRHWAKLCSID 449
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G L Y + LM I FLQQR+ +LP G
Sbjct: 450 RPEEGGLPPYVFALMAIFFLQQRKEPLLPVYLG 482
Score = 88 (36.0 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 599 IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
+G+L ++A + A VIS+R ++S++ KDW ++ I IEDP+ V +
Sbjct: 550 VGQLWVELLRFYALEFNLADLVISIRVKESVSRESKDWPKK------RIAIEDPYSVKRN 603
Query: 659 LGRVVD 664
+ R ++
Sbjct: 604 VARTLN 609
Score = 39 (18.8 bits), Expect = 6.6e-34, Sum P(3) = 6.6e-34
Identities = 9/44 (20%), Positives = 16/44 (36%)
Query: 313 EDLVDSLLPDDESELKNDTH---ERNDKKHRNSRDKEIRSDNRG 353
ED + P + + TH E D++ + + RG
Sbjct: 829 EDTLSHFTPSGQDQTSGITHSDEEEEDEEEEEEEEPRLSISQRG 872
Score = 39 (18.8 bits), Expect = 2.4e-15, Sum P(4) = 2.4e-15
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 676 ERAAEIMQHDP 686
ER+ E+ +HDP
Sbjct: 651 ERSKEVAKHDP 661
Score = 38 (18.4 bits), Expect = 8.4e-34, Sum P(3) = 8.4e-34
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 322 DDESELK---NDTHERNDKKHRNSRDKEIRSDNR 352
DD ++K +T +N+K+ K S +R
Sbjct: 733 DDREDVKVPRQETRSKNEKEENGKEGKHPLSTDR 766
Score = 37 (18.1 bits), Expect = 6.6e-34, Sum P(3) = 6.6e-34
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 88 FPQNPWASSSTENQQQRLLCEDFG 111
+ Q W + + ++Q +R L ++ G
Sbjct: 84 YSQPVWITDNHKDQSKRWLSDELG 107
>UNIPROTKB|Q5TAX3 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001816 "cytokine production" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IMP] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010586 "miRNA metabolic process" evidence=ISS] [GO:0071044
"histone mRNA catabolic process" evidence=IMP] [GO:0019827 "stem
cell maintenance" evidence=IMP] [GO:0010587 "miRNA catabolic
process" evidence=IMP] [GO:0031123 "RNA 3'-end processing"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS00028 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 EMBL:CH471059
GO:GO:0008270 GO:GO:0003676 GO:GO:0031054 GO:GO:0032088
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827 GO:GO:0001816
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265 GO:GO:0010587
GO:GO:0031123 GO:GO:0031664 EMBL:AK303532 EMBL:AL138849
EMBL:BC131734 EMBL:D83776 IPI:IPI00289861 IPI:IPI00550431
RefSeq:NP_001009881.1 RefSeq:NP_056084.1 UniGene:Hs.655407
ProteinModelPortal:Q5TAX3 SMR:Q5TAX3 IntAct:Q5TAX3 STRING:Q5TAX3
PhosphoSite:Q5TAX3 DMDM:116242850 PaxDb:Q5TAX3 PRIDE:Q5TAX3
DNASU:23318 Ensembl:ENST00000257177 Ensembl:ENST00000355809
Ensembl:ENST00000371544 GeneID:23318 KEGG:hsa:23318 UCSC:uc001ctx.2
CTD:23318 GeneCards:GC01M052888 HGNC:HGNC:28981 HPA:HPA027412
HPA:HPA027973 MIM:613692 neXtProt:NX_Q5TAX3 PharmGKB:PA134918178
KO:K13291 OrthoDB:EOG4DZ1TJ ChiTaRS:ZCCHC11 GenomeRNAi:23318
NextBio:45208 ArrayExpress:Q5TAX3 Bgee:Q5TAX3 CleanEx:HS_ZCCHC11
Genevestigator:Q5TAX3 GermOnline:ENSG00000134744 Uniprot:Q5TAX3
Length = 1644
Score = 403 (146.9 bits), Expect = 6.8e-34, Sum P(2) = 6.8e-34
Identities = 97/272 (35%), Positives = 150/272 (55%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA IL+ L+N+ +
Sbjct: 991 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI 1050
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 1051 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCD 1110
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT---VDDIECAYFDQVDK 587
+ +G+LSSYAY+LM ++FLQQR+P ++P LQ + + VD +FD+ ++
Sbjct: 1111 IGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEE 1170
Query: 588 LH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGND 643
L G +N ES+G L ++ D+ VIS+R ++ EK WT +
Sbjct: 1171 LKKRLPSLG-KNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKC--- 1226
Query: 644 RHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
I IEDPF++ H+LG V + + + F
Sbjct: 1227 ---IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1255
Score = 219 (82.2 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 49/153 (32%), Positives = 84/153 (54%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ-NVQALTR 472
P+ L LYGS F + SD+++ + ++N ++L+K+ IL+ + L +V++
Sbjct: 392 PECSLRLYGSSLTRFALKSSDVNIDIKF-PPKMNHPDLLIKVLGILKKNVLYVDVESDFH 450
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VP+V D +G+ C + N +A + T LL +I+ L ++WAK ++
Sbjct: 451 AKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYID 510
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
G + SY + LM + FLQQR+P +LPCL G
Sbjct: 511 SQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLG 543
Score = 78 (32.5 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 595 NKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFE 654
N+ S+G+L ++ VI VR ++++ K+W +R I IEDPF
Sbjct: 625 NRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKR------RIAIEDPFS 678
Query: 655 VTHDLGRVVDKFSI-KVLREEFERAA 679
V ++ R ++ + + + E F RAA
Sbjct: 679 VKRNVARSLNSQLVYEYVVERF-RAA 703
Score = 44 (20.5 bits), Expect = 6.8e-34, Sum P(2) = 6.8e-34
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 307 DMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRD 344
D DD + D + DD S++KND E N K++ + D
Sbjct: 224 DSDDSASGIED--VSDDLSKMKND--ESN-KENSSEMD 256
Score = 44 (20.5 bits), Expect = 6.8e-34, Sum P(2) = 6.8e-34
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 328 KNDTHERNDKKHRNSRD--KEIRSDNRGKRLLSQRMRN-LKWQIECRADIGRLNAPFLAI 384
KN E N K +D K+ +DN+ + + ++ L + R +G+L L
Sbjct: 580 KNSIAEENKAKADQPKDDTKKTETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKF 639
Query: 385 Y 385
Y
Sbjct: 640 Y 640
>UNIPROTKB|F1MCY7 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070102 "interleukin-6-mediated signaling pathway"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IEA] [GO:0019827 "stem
cell maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019827 GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 EMBL:DAAA02008880 EMBL:DAAA02008879 IPI:IPI01003734
Ensembl:ENSBTAT00000003525 OMA:TDCRSNL Uniprot:F1MCY7
Length = 1667
Score = 400 (145.9 bits), Expect = 7.0e-34, P = 7.0e-34
Identities = 96/272 (35%), Positives = 150/272 (55%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA IL+ L+N+ +
Sbjct: 1013 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI 1072
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 1073 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCD 1132
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT---VDDIECAYFDQVDK 587
+ +G+LSSYAY+LM ++FLQQR+P ++P LQ + + VD +FD+ ++
Sbjct: 1133 IGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEE 1192
Query: 588 LH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGND 643
L G +N E++G L ++ D+ VIS+R ++ EK WT +
Sbjct: 1193 LKKRLPSLG-KNTETLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKC--- 1248
Query: 644 RHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
I IEDPF++ H+LG V + + + F
Sbjct: 1249 ---IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1277
Score = 203 (76.5 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 47/155 (30%), Positives = 83/155 (53%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ-NVQALTR 472
P+ L LYGS F + SD+++ + ++N ++L+++ IL+ L +V++
Sbjct: 413 PECSLRLYGSSLTKFALKSSDVNIDIKF-PPKMNHPDLLIQVLGILKKSVLYVDVESDFH 471
Query: 473 ARVPIVKLMDPVT--GISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
A+VP+V D + G+ C + N +A + T LL +++ L ++WAK
Sbjct: 472 AKVPVVVCKDRKSHSGLLCRVSAGNDMACLTTDLLAALGKMEPVFTPLVLAFRYWAKLCY 531
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
++ G + SY + LM + FLQQR+P +LPCL G
Sbjct: 532 IDSQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLG 566
Score = 77 (32.2 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 595 NKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFE 654
N+ S+G+L ++ VI VR ++++ K+W +R I IEDPF
Sbjct: 648 NRVSLGQLWLELLKFYTLDFALEEYVICVRIKDILTRENKNWPKR------RIAIEDPFS 701
Query: 655 VTHDLGRVVDKFSI-KVLREEFERAA 679
+ ++ R ++ + + + E F RAA
Sbjct: 702 IKRNVARSLNSQLVYEYVVERF-RAA 726
>UNIPROTKB|E1C6A7 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0050265
"RNA uridylyltransferase activity" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0010587 GO:GO:0031123 GO:GO:0031664 OMA:TDCRSNL
EMBL:AADN02012569 IPI:IPI00602900 Ensembl:ENSGALT00000017295
Uniprot:E1C6A7
Length = 1575
Score = 399 (145.5 bits), Expect = 8.5e-34, P = 8.5e-34
Identities = 96/272 (35%), Positives = 149/272 (54%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA +L+ L+N+ +
Sbjct: 955 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIEGLAKVLKKHPGLRNILPI 1014
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 1015 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCD 1074
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT---VDDIECAYFDQVDK 587
+ +G+LSSYAY+LM ++FLQQR P ++P LQ + + VD +FD +++
Sbjct: 1075 IGDASRGSLSSYAYILMVLYFLQQRNPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDDMEE 1134
Query: 588 LH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGND 643
L G +N ES+G L ++ D+ VIS+R ++ EK WT +
Sbjct: 1135 LKKRLPSLG-KNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKC--- 1190
Query: 644 RHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
I IEDPF++ H+LG V + + + F
Sbjct: 1191 ---IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1219
Score = 224 (83.9 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 49/153 (32%), Positives = 88/153 (57%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQN-VQALTR 472
PD L +YGSC F SDI++ + ++++ +VL+++ +IL++ + + V++
Sbjct: 340 PDCSLRMYGSCLTRFAFKTSDINIDIKF-PPKMSQPDVLIQVLEILKNSAVYSEVESDFH 398
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VP+V D +G++C + N +A + T LL +++ L L ++WAK ++
Sbjct: 399 AKVPVVFCKDIKSGLTCKVSARNDVACLTTDLLAALGKLEPVLIPLVLAFRYWAKLCHID 458
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G + SY++ LM I FLQQR+P ILP G
Sbjct: 459 CQAEGGIPSYSFALMVIFFLQQRKPPILPSYLG 491
Score = 87 (35.7 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 28/115 (24%), Positives = 53/115 (46%)
Query: 565 GMEKTYSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVR 624
G +K S VD+ A + L F + ++ S+G+L ++ VIS+R
Sbjct: 546 GGKKVTSSEVDNQSNAKEKHGNSLLAFKTPHQVSLGQLWLELLKFYTLEFALEEYVISIR 605
Query: 625 TGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSI-KVLREEFERA 678
++++ K+W +R I IEDPF + ++ R ++ + + + E F A
Sbjct: 606 VQELLTRENKNWPKR------RIAIEDPFALKRNVARSLNSQMVFEYILERFRTA 654
>UNIPROTKB|F1PFM0 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070102 "interleukin-6-mediated
signaling pathway" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0031054
"pre-miRNA processing" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0001816 "cytokine production"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909 PROSITE:PS50158
SMART:SM00343 Pfam:PF03828 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0031054
GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827
GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 EMBL:AAEX03009705 Ensembl:ENSCAFT00000006009
Uniprot:F1PFM0
Length = 1635
Score = 400 (145.9 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 96/272 (35%), Positives = 150/272 (55%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA IL+ L+N+ +
Sbjct: 981 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI 1040
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 1041 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCD 1100
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT---VDDIECAYFDQVDK 587
+ +G+LSSYAY+LM ++FLQQR+P ++P LQ + + VD +FD+ ++
Sbjct: 1101 IGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEE 1160
Query: 588 LH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGND 643
L G +N E++G L ++ D+ VIS+R ++ EK WT +
Sbjct: 1161 LKKRLPSLG-KNTETLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKC--- 1216
Query: 644 RHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
I IEDPF++ H+LG V + + + F
Sbjct: 1217 ---IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1245
Score = 214 (80.4 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 47/153 (30%), Positives = 82/153 (53%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ-NVQALTR 472
P+ L LYGS F + SD+++ + +N ++L+++ IL+ L +V++
Sbjct: 384 PECSLRLYGSSLTKFALKNSDVNIDIKF-PPRMNHPDLLIQVLGILKKSVLYIDVESDFH 442
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VP+V D +G+ C + N +A + T LL +++ L ++WAK ++
Sbjct: 443 AKVPVVVCKDRKSGLLCRVSAGNDMACLTTDLLAALGKMEPVFTPLVLAFRYWAKLCYID 502
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
G + SY + LM + FLQQR+P +LPCL G
Sbjct: 503 SQTDGGIPSYCFALMVLFFLQQRKPPLLPCLLG 535
Score = 82 (33.9 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 592 GSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIED 651
G+ N+ S+G+L ++ VI VR ++++ K+W +R I IED
Sbjct: 614 GTPNQVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKR------RIAIED 667
Query: 652 PFEVTHDLGRVVDKFSI-KVLREEFERAA 679
PF V ++ R ++ + + + E F RAA
Sbjct: 668 PFSVKRNVARSLNSQLVYEYVVERF-RAA 695
Score = 44 (20.5 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 307 DMDDFGEDLVDSLLPDDESELKNDTHERND 336
D DD + D + DD S++KND + +
Sbjct: 216 DSDDSASGIED--IADDLSKMKNDDSNKEN 243
>UNIPROTKB|J9P9X1 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00550000074490
OMA:TDCRSNL EMBL:AAEX03009705 Ensembl:ENSCAFT00000048947
Uniprot:J9P9X1
Length = 1647
Score = 400 (145.9 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 96/272 (35%), Positives = 150/272 (55%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA IL+ L+N+ +
Sbjct: 993 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI 1052
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 1053 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCD 1112
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT---VDDIECAYFDQVDK 587
+ +G+LSSYAY+LM ++FLQQR+P ++P LQ + + VD +FD+ ++
Sbjct: 1113 IGDASRGSLSSYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEE 1172
Query: 588 LH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGND 643
L G +N E++G L ++ D+ VIS+R ++ EK WT +
Sbjct: 1173 LKKRLPSLG-KNTETLGELWLGLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKC--- 1228
Query: 644 RHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
I IEDPF++ H+LG V + + + F
Sbjct: 1229 ---IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 1257
Score = 214 (80.4 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 47/153 (30%), Positives = 82/153 (53%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ-NVQALTR 472
P+ L LYGS F + SD+++ + +N ++L+++ IL+ L +V++
Sbjct: 396 PECSLRLYGSSLTKFALKNSDVNIDIKF-PPRMNHPDLLIQVLGILKKSVLYIDVESDFH 454
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VP+V D +G+ C + N +A + T LL +++ L ++WAK ++
Sbjct: 455 AKVPVVVCKDRKSGLLCRVSAGNDMACLTTDLLAALGKMEPVFTPLVLAFRYWAKLCYID 514
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
G + SY + LM + FLQQR+P +LPCL G
Sbjct: 515 SQTDGGIPSYCFALMVLFFLQQRKPPLLPCLLG 547
Score = 82 (33.9 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 592 GSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIED 651
G+ N+ S+G+L ++ VI VR ++++ K+W +R I IED
Sbjct: 626 GTPNQVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKR------RIAIED 679
Query: 652 PFEVTHDLGRVVDKFSI-KVLREEFERAA 679
PF V ++ R ++ + + + E F RAA
Sbjct: 680 PFSVKRNVARSLNSQLVYEYVVERF-RAA 707
Score = 44 (20.5 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 307 DMDDFGEDLVDSLLPDDESELKNDTHERND 336
D DD + D + DD S++KND + +
Sbjct: 228 DSDDSASGIED--IADDLSKMKNDDSNKEN 255
>UNIPROTKB|F1NYJ2 [details] [associations]
symbol:LOC100857368 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
InterPro:IPR002058 GeneTree:ENSGT00550000074490 EMBL:AADN02064833
EMBL:AADN02064834 IPI:IPI00572679 Ensembl:ENSGALT00000020583
ArrayExpress:F1NYJ2 Uniprot:F1NYJ2
Length = 1330
Score = 393 (143.4 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 100/305 (32%), Positives = 160/305 (52%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADIL------QSDNLQN 466
+P +L L+GS N FG +SD+D+C+ ++ E + K A L S +L+N
Sbjct: 1000 FPGTKLNLFGSSKNGFGFKQSDLDICMTMDGLETAEILPCYKTASELGRFINLMSKSLRN 1059
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
V +T A+VPIVK +G+ DI + N LA+ NT+LL YA ID R++ L + +K +
Sbjct: 1060 VLPITTAKVPIVKFFHVRSGLEVDISLYNTLALHNTRLLSSYAAIDPRVKYLCYTMKVFT 1119
Query: 527 KSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFD 583
K + +G+LSSYAY LM ++FLQQR P ++P LQ + K + VD +FD
Sbjct: 1120 KMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKEPKKPEILVDGWNVYFFD 1179
Query: 584 QVDKLHGF---GSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRI 640
++++L +N ES+G+L ++ D+ +VI +R + ++ +K WT +
Sbjct: 1180 KIEELPAVWPDSGKNTESVGQLWLGLLRFYTEEFDFKEHVICIRRKNLLTTFKKQWTSKY 1239
Query: 641 GNDRHLICIEDPFEVTHDLG----RVVDKFSIKVL---REEFERAAEIMQHD-PNPCVKL 692
I IEDPF++ H+LG R + F +K R F +I + P+
Sbjct: 1240 ------IVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGTPVKIFPKEYPSKMEYF 1293
Query: 693 FEPYV 697
F+P V
Sbjct: 1294 FDPEV 1298
Score = 198 (74.8 bits), Expect = 6.9e-15, Sum P(3) = 6.9e-15
Identities = 49/153 (32%), Positives = 79/153 (51%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQ-SDNLQNVQALTR 472
P+ L LYGS + FG SDI++ + S +++ +VLL + + LQ S++ V A
Sbjct: 318 PECSLRLYGSSLSGFGFKTSDINIDIQFPAS-MSQPDVLLLVQESLQNSESFIGVDADFH 376
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
R+P+V + +G+ C + N A + T L +++ + L ++WAK V+
Sbjct: 377 TRIPVVVCREKQSGLICKVSAGNENAYLTTNHLATIGKLEPTVTSLVIAFRYWAKLCCVD 436
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G LS Y + LM I FLQQR+ LP G
Sbjct: 437 RPEEGGLSPYVFALMVIFFLQQRKEPFLPVYLG 469
Score = 81 (33.6 bits), Expect = 6.9e-15, Sum P(3) = 6.9e-15
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 599 IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
+G+L ++A + A VIS+R +S++ KDW ++ I +EDP+ V +
Sbjct: 530 VGQLWVELLRFYALEFNMADLVISIRLKEIVSRELKDWPKK------RIAVEDPYSVKRN 583
Query: 659 LGRVVD 664
+ R ++
Sbjct: 584 VARTLN 589
Score = 45 (20.9 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 325 SELKNDTHERNDKKHRNSRD---KEIRSDNRG 353
+ LKN TH + K +D K I D+RG
Sbjct: 72 NSLKNITHSQGSKLSDTQKDQIKKWISDDHRG 103
>UNIPROTKB|F1NJM6 [details] [associations]
symbol:LOC100857368 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0031123 OMA:KYFALPH
EMBL:AADN02064833 EMBL:AADN02064834 IPI:IPI00681958
Ensembl:ENSGALT00000033908 ArrayExpress:F1NJM6 Uniprot:F1NJM6
Length = 1477
Score = 393 (143.4 bits), Expect = 6.6e-33, Sum P(2) = 6.6e-33
Identities = 100/305 (32%), Positives = 160/305 (52%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADIL------QSDNLQN 466
+P +L L+GS N FG +SD+D+C+ ++ E + K A L S +L+N
Sbjct: 1019 FPGTKLNLFGSSKNGFGFKQSDLDICMTMDGLETAEILPCYKTASELGRFINLMSKSLRN 1078
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
V +T A+VPIVK +G+ DI + N LA+ NT+LL YA ID R++ L + +K +
Sbjct: 1079 VLPITTAKVPIVKFFHVRSGLEVDISLYNTLALHNTRLLSSYAAIDPRVKYLCYTMKVFT 1138
Query: 527 KSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM---EKTYSVTVDDIECAYFD 583
K + +G+LSSYAY LM ++FLQQR P ++P LQ + K + VD +FD
Sbjct: 1139 KMCDIGDASRGSLSSYAYTLMVLYFLQQRNPPVIPVLQEIYKEPKKPEILVDGWNVYFFD 1198
Query: 584 QVDKLHGF---GSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRI 640
++++L +N ES+G+L ++ D+ +VI +R + ++ +K WT +
Sbjct: 1199 KIEELPAVWPDSGKNTESVGQLWLGLLRFYTEEFDFKEHVICIRRKNLLTTFKKQWTSKY 1258
Query: 641 GNDRHLICIEDPFEVTHDLG----RVVDKFSIKVL---REEFERAAEIMQHD-PNPCVKL 692
I IEDPF++ H+LG R + F +K R F +I + P+
Sbjct: 1259 ------IVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGTPVKIFPKEYPSKMEYF 1312
Query: 693 FEPYV 697
F+P V
Sbjct: 1313 FDPEV 1317
Score = 198 (74.8 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 49/153 (32%), Positives = 79/153 (51%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQ-SDNLQNVQALTR 472
P+ L LYGS + FG SDI++ + S +++ +VLL + + LQ S++ V A
Sbjct: 318 PECSLRLYGSSLSGFGFKTSDINIDIQFPAS-MSQPDVLLLVQESLQNSESFIGVDADFH 376
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
R+P+V + +G+ C + N A + T L +++ + L ++WAK V+
Sbjct: 377 TRIPVVVCREKQSGLICKVSAGNENAYLTTNHLATIGKLEPTVTSLVIAFRYWAKLCCVD 436
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
+G LS Y + LM I FLQQR+ LP G
Sbjct: 437 RPEEGGLSPYVFALMVIFFLQQRKEPFLPVYLG 469
Score = 81 (33.6 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 18/66 (27%), Positives = 35/66 (53%)
Query: 599 IGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
+G+L ++A + A VIS+R +S++ KDW ++ I +EDP+ V +
Sbjct: 530 VGQLWVELLRFYALEFNMADLVISIRLKEIVSRELKDWPKK------RIAVEDPYSVKRN 583
Query: 659 LGRVVD 664
+ R ++
Sbjct: 584 VARTLN 589
Score = 45 (20.9 bits), Expect = 6.6e-33, Sum P(2) = 6.6e-33
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 325 SELKNDTHERNDKKHRNSRD---KEIRSDNRG 353
+ LKN TH + K +D K I D+RG
Sbjct: 72 NSLKNITHSQGSKLSDTQKDQIKKWISDDHRG 103
>UNIPROTKB|E2RQN5 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 OMA:NQKTEAR
EMBL:AAEX03002115 Ensembl:ENSCAFT00000014375 NextBio:20893469
Uniprot:E2RQN5
Length = 480
Score = 364 (133.2 bits), Expect = 7.0e-33, P = 7.0e-33
Identities = 91/273 (33%), Positives = 148/273 (54%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEIN-KSEV--LLKLAD----ILQSDNLQ 465
+P +RL+L GS N FG SD D+CL + + +N K+E +L L S ++
Sbjct: 192 FPQSRLFLVGSSLNGFGTRSSDGDLCLVVKEEPVNQKTEARHILTLVHKHFCTRLSGYIE 251
Query: 466 NVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHW 525
Q L RA+VPIVK D V+ + D+ +NN++ + NT LLR YA ++ R++ L ++K W
Sbjct: 252 RPQ-LIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKW 310
Query: 526 AKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDD-IECAYFDQ 584
A +N +GTLSSY+ VLM +H+LQ ILP +Q K Y + I+ Q
Sbjct: 311 ASHHEINDASRGTLSSYSLVLMVLHYLQTLPEPILPSIQ---KIYPESFSPAIQLHLVHQ 367
Query: 585 VD-KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEK-DWTRRIGN 642
+ + S+N+ ++G L+ F Y+A D+ S +ISVR I + + +W +
Sbjct: 368 APCNVPPYLSKNESNLGDLLLGFLKYYATEFDWNSQMISVREAKAIPRPDGIEWRNKY-- 425
Query: 643 DRHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
IC+E+PF+ T+ V +K +++++F
Sbjct: 426 ----ICVEEPFDGTNTARAVHEKQKFDMIKDQF 454
>MGI|MGI:2140950 [details] [associations]
symbol:Papd4 "PAP associated domain containing 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071044 "histone
mRNA catabolic process" evidence=ISO] MGI:MGI:2140950 Pfam:PF03828
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 GeneTree:ENSGT00550000074490
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR OrthoDB:EOG4P2Q22 ChiTaRS:PAPD4 EMBL:AM419011
EMBL:BC016629 EMBL:AK033141 IPI:IPI00130216 IPI:IPI00896066
RefSeq:NP_598666.1 UniGene:Mm.242865 ProteinModelPortal:Q91YI6
SMR:Q91YI6 STRING:Q91YI6 PhosphoSite:Q91YI6 PRIDE:Q91YI6
DNASU:100715 Ensembl:ENSMUST00000048702 GeneID:100715
KEGG:mmu:100715 UCSC:uc007rkz.1 UCSC:uc007rla.1 InParanoid:Q91YI6
NextBio:354606 Bgee:Q91YI6 Genevestigator:Q91YI6 Uniprot:Q91YI6
Length = 484
Score = 358 (131.1 bits), Expect = 3.2e-32, P = 3.2e-32
Identities = 90/276 (32%), Positives = 152/276 (55%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDS----EIN-KSEV--LLKLAD----ILQS 461
+P +RL+L GS N FG SD D+CL + + ++N K+E +L L S
Sbjct: 192 FPQSRLFLVGSSLNGFGARSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLS 251
Query: 462 DNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFI 521
++ Q L RA+VPIVK D V+ + D+ +NN + + NT LLR YA ++ R++ L +
Sbjct: 252 GYIERPQ-LIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYAYLENRVRPLVLV 310
Query: 522 VKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM-EKTYSVTVDDIECA 580
+K WA +N +GTLSSY+ VLM +H+LQ ILP LQ + +++S +V +
Sbjct: 311 IKKWASHHDINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYPESFSTSVQ-LHLV 369
Query: 581 YFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISK-QEKDWTRR 639
+ + + + S+N+ S+G L+ F Y+A D+ + +ISVR I + + +W +
Sbjct: 370 HHAPCN-VPPYLSKNESSLGDLLLGFLKYYATEFDWNTQMISVREAKAIPRPDDMEWRNK 428
Query: 640 IGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
IC+E+PF+ T+ V +K +++++F
Sbjct: 429 Y------ICVEEPFDGTNTARAVHEKQKFDMIKDQF 458
>RGD|1306438 [details] [associations]
symbol:Papd4 "PAP associated domain containing 4" species:10116
"Rattus norvegicus" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=ISO;ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=ISO;ISS] Pfam:PF03828 RGD:1306438
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 GeneTree:ENSGT00550000074490
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR OrthoDB:EOG4P2Q22 EMBL:BC085771 IPI:IPI00372891
RefSeq:NP_001008373.1 UniGene:Rn.98477 ProteinModelPortal:Q5U315
STRING:Q5U315 Ensembl:ENSRNOT00000016135 GeneID:361878
KEGG:rno:361878 UCSC:RGD:1306438 InParanoid:Q5U315 NextBio:677940
Genevestigator:Q5U315 Uniprot:Q5U315
Length = 484
Score = 357 (130.7 bits), Expect = 4.2e-32, P = 4.2e-32
Identities = 90/276 (32%), Positives = 152/276 (55%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDS----EIN-KSEV--LLKLAD----ILQS 461
+P +RL+L GS N FG SD D+CL + + ++N K+E +L L S
Sbjct: 192 FPQSRLFLVGSSLNGFGARSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLS 251
Query: 462 DNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFI 521
++ Q L RA+VPIVK D V+ + D+ +NN + + NT LLR YA ++ R++ L +
Sbjct: 252 GYIERPQ-LIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYAYLENRVRPLVLV 310
Query: 522 VKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM-EKTYSVTVDDIECA 580
+K WA +N +GTLSSY+ VLM +H+LQ ILP LQ + +++S +V +
Sbjct: 311 IKKWASHHEINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYPESFSTSVQ-LHLV 369
Query: 581 YFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISK-QEKDWTRR 639
+ + + + S+N+ S+G L+ F Y+A D+ + +ISVR I + + +W +
Sbjct: 370 HHAPCN-VPPYLSKNESSLGDLLLGFLKYYATEFDWNTQMISVREAKAIPRPDDMEWRNK 428
Query: 640 IGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
IC+E+PF+ T+ V +K +++++F
Sbjct: 429 Y------ICVEEPFDGTNTARAVHEKQKFDMIKDQF 458
>UNIPROTKB|Q2HJ44 [details] [associations]
symbol:PAPD4 "Poly(A) RNA polymerase GLD2" species:9913
"Bos taurus" [GO:0071044 "histone mRNA catabolic process"
evidence=ISS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] Pfam:PF03828 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006397
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079
HOVERGEN:HBG097533 EMBL:BT025394 EMBL:BC113319 IPI:IPI00702849
IPI:IPI00843674 RefSeq:NP_001039826.1 UniGene:Bt.92095
ProteinModelPortal:Q2HJ44 STRING:Q2HJ44 PRIDE:Q2HJ44
Ensembl:ENSBTAT00000008885 Ensembl:ENSBTAT00000048886 GeneID:533862
KEGG:bta:533862 CTD:167153 HOGENOM:HOG000088606 InParanoid:Q2HJ44
OMA:NQKTEAR OrthoDB:EOG4P2Q22 NextBio:20876175 Uniprot:Q2HJ44
Length = 484
Score = 354 (129.7 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 91/277 (32%), Positives = 149/277 (53%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDS----EIN-KSEV--LLKLAD----ILQS 461
+P +RL+L GS N FG SD D+CL + + ++N K+E +L L S
Sbjct: 192 FPQSRLFLVGSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLS 251
Query: 462 DNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFI 521
++ Q L RA+VPIVK D V+ + D+ +NN++ + NT LLR YA ++ R++ L +
Sbjct: 252 GYIERPQ-LIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLV 310
Query: 522 VKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVD-DIECA 580
+K WA +N +GTLSSY+ VLM +H+LQ ILP +Q K Y + I+
Sbjct: 311 IKKWASHHDINDASRGTLSSYSLVLMVLHYLQTLPEPILPSIQ---KIYPESFSPSIQLH 367
Query: 581 YFDQVD-KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEK-DWTR 638
Q + + S+N+ ++G L+ F Y+A D+ S +ISVR I + + +W
Sbjct: 368 LVHQAPCNVPPYLSKNESNLGDLLLGFLKYYATEFDWNSQMISVREAKAIPRPDGIEWRN 427
Query: 639 RIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
+ IC+E+PF+ T+ V +K +++++F
Sbjct: 428 KY------ICVEEPFDGTNTARAVHEKQKFDMIKDQF 458
>UNIPROTKB|Q6PIY7 [details] [associations]
symbol:PAPD4 "Poly(A) RNA polymerase GLD2" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IDA]
[GO:0031380 "nuclear RNA-directed RNA polymerase complex"
evidence=IC] [GO:0043631 "RNA polyadenylation" evidence=IDA]
[GO:0071044 "histone mRNA catabolic process" evidence=IMP]
Pfam:PF03828 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 EMBL:CH471084 GO:GO:0071044 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0031380 GO:GO:0043631
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR EMBL:AK095818 EMBL:BC026061 EMBL:BC047581
IPI:IPI00167560 IPI:IPI00895778 RefSeq:NP_001107865.1
RefSeq:NP_001107866.1 RefSeq:NP_776158.2 UniGene:Hs.418198
HSSP:Q86MV5 ProteinModelPortal:Q6PIY7 SMR:Q6PIY7 IntAct:Q6PIY7
STRING:Q6PIY7 PhosphoSite:Q6PIY7 DMDM:74737798 PaxDb:Q6PIY7
PRIDE:Q6PIY7 Ensembl:ENST00000296783 Ensembl:ENST00000423041
Ensembl:ENST00000428308 Ensembl:ENST00000453514 GeneID:167153
KEGG:hsa:167153 UCSC:uc003kga.2 UCSC:uc003kgb.2
GeneCards:GC05P078944 HGNC:HGNC:26776 MIM:614121 neXtProt:NX_Q6PIY7
PharmGKB:PA134918975 InParanoid:Q6PIY7 PhylomeDB:Q6PIY7
ChiTaRS:PAPD4 GenomeRNAi:167153 NextBio:88659 ArrayExpress:Q6PIY7
Bgee:Q6PIY7 CleanEx:HS_PAPD4 Genevestigator:Q6PIY7 Uniprot:Q6PIY7
Length = 484
Score = 354 (129.7 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 92/277 (33%), Positives = 149/277 (53%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDS----EIN-KSEV--LLKLAD----ILQS 461
+P +RL+L GS N FG SD D+CL + + ++N K+E +L L S
Sbjct: 192 FPQSRLFLVGSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLS 251
Query: 462 DNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFI 521
++ Q L RA+VPIVK D V+ + D+ +NN++ + NT LLR YA ++ R++ L +
Sbjct: 252 GYIERPQ-LIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLV 310
Query: 522 VKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDD-IECA 580
+K WA +N +GTLSSY+ VLM +H+LQ ILP LQ K Y + I+
Sbjct: 311 IKKWASHHQINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQ---KIYPESFSPAIQLH 367
Query: 581 YFDQVD-KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEK-DWTR 638
Q + + S+N+ ++G L+ F Y+A D+ S +ISVR I + + +W
Sbjct: 368 LVHQAPCNVPPYLSKNESNLGDLLLGFLKYYATEFDWNSQMISVREAKAIPRPDGIEWRN 427
Query: 639 RIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
+ IC+E+PF+ T+ V +K +++++F
Sbjct: 428 KY------ICVEEPFDGTNTARAVHEKQKFDMIKDQF 458
>UNIPROTKB|F1RF43 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 CTD:167153
OMA:NQKTEAR EMBL:CU855670 EMBL:CU915633 RefSeq:XP_003123800.1
UniGene:Ssc.41247 Ensembl:ENSSSCT00000015417 GeneID:100512336
KEGG:ssc:100512336 Uniprot:F1RF43
Length = 484
Score = 352 (129.0 bits), Expect = 8.9e-31, P = 8.9e-31
Identities = 89/276 (32%), Positives = 152/276 (55%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDS----EIN-KSEV--LLKLAD----ILQS 461
+P ++L+L GS N FG SD D+CL + + ++N K+E +L L S
Sbjct: 192 FPQSKLFLVGSSLNGFGTRTSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLS 251
Query: 462 DNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFI 521
++ Q L RA+VPIVK D V+ + D+ +NN++ + NT LLR YA ++ R++ L +
Sbjct: 252 GYIERPQ-LIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLV 310
Query: 522 VKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM-EKTYSVTVDDIECA 580
+K WA +N +GTLSSY+ VLM +H+LQ ILP +Q M +++S + +
Sbjct: 311 IKKWASHHEINDASRGTLSSYSLVLMVLHYLQTLPEPILPSIQKMYPESFSPALQ-LHLV 369
Query: 581 YFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEK-DWTRR 639
+ + + + S+N+ ++G L+ F Y+A D+ S +ISVR I + + +W +
Sbjct: 370 HQAPYN-VPPYLSKNESNLGDLLLGFLKYYATEFDWNSQMISVREAKAIPRPDGIEWRNK 428
Query: 640 IGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
IC+E+PF+ T+ V +K V++++F
Sbjct: 429 F------ICVEEPFDGTNTARAVHEKQKFDVIKDQF 458
>DICTYBASE|DDB_G0281431 [details] [associations]
symbol:DDB_G0281431 "Terminal uridylyltransferase 4"
species:44689 "Dictyostelium discoideum" [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 dictyBase:DDB_G0281431 Pfam:PF03828 EMBL:AAFI02000041
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_640670.1
ProteinModelPortal:Q54TZ1 EnsemblProtists:DDB0205577 GeneID:8623055
KEGG:ddi:DDB_G0281431 InParanoid:Q54TZ1 Uniprot:Q54TZ1
Length = 920
Score = 364 (133.2 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 83/282 (29%), Positives = 155/282 (54%)
Query: 417 RLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQALTRARVP 476
RL+L+GS NS + SDIDVC + N +++ ++ IL+ + +N+ ++++RVP
Sbjct: 605 RLFLFGSSVNSMALKNSDIDVCANLKR---NDEKLIFIISSILKKNGYENIVTISQSRVP 661
Query: 477 IVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQ 536
++K D I D+CINNLLA+ N++L++ Y+ ID R++ L ++K WAKS+G+N +
Sbjct: 662 LIKFFDAKYDIHIDLCINNLLAIENSRLIKSYSSIDSRMEPLFMLIKTWAKSKGLNDAAE 721
Query: 537 GTLSSYAYVLMCIHFLQQRRPAILPCL-QGME-KTYSVTVDDIECAYFDQV--------- 585
+LSSY+Y + + FLQ R+P +LPCL +GM KT V V+++ +Y D
Sbjct: 722 KSLSSYSYANLTVFFLQTRQPPVLPCLHKGMSPKTKEVLVENVNVSYLDPTIFLNSSNNG 781
Query: 586 --DKLHG-FGSRNKESIGRLVWAFFNYWAY--GHDYASNVISVRTGSTISKQEKDWTRRI 640
+ +G +G + ++ + F ++ + D+ + +I +R G + + + + I
Sbjct: 782 NNNNANGNYGFKLNQNKESVAELLFGFFDFYSKFDFENWIIDIRRGEAVQLKSR---KEI 838
Query: 641 GNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIM 682
+ I I+DPF + + + + + E +AA ++
Sbjct: 839 NSTPANIYIQDPFIFDFNPSKSLSEKNFIKFNTEVRKAAFLL 880
Score = 37 (18.1 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 322 DDESELKNDTHERNDKKHRNSRDKEIRSDNRGK 354
D+E E + E+ ++++ ++ I + N+ K
Sbjct: 343 DEEKEEQEQEEEKEEEEYVEEEEEVIDNINKEK 375
>WB|WBGene00019629 [details] [associations]
symbol:cid-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0050265 "RNA uridylyltransferase
activity" evidence=IDA] [GO:0071076 "RNA 3' uridylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR017896 PROSITE:PS00028
PROSITE:PS51379 SMART:SM00343 SMART:SM00355 Pfam:PF03828
GO:GO:0048471 GO:GO:0008270 GO:GO:0000003 GO:GO:0003676
GO:GO:0051536 GO:GO:0000794 Gene3D:4.10.60.10 GO:GO:0043186
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265 GO:GO:0071076
GeneTree:ENSGT00550000074490 EMBL:FO081618 PIR:C88451
RefSeq:NP_498099.1 ProteinModelPortal:Q09409 IntAct:Q09409
STRING:Q09409 PaxDb:Q09409 EnsemblMetazoa:K10D2.3 GeneID:175707
KEGG:cel:CELE_K10D2.3 UCSC:K10D2.3 CTD:175707 WormBase:K10D2.3
InParanoid:Q09409 OMA:CSDIDIC NextBio:889300 Uniprot:Q09409
Length = 1425
Score = 346 (126.9 bits), Expect = 6.5e-28, P = 6.5e-28
Identities = 94/289 (32%), Positives = 151/289 (52%)
Query: 415 DARLYLYGSCANSFGVSKSDIDVCLAINDSEI-----NKSEVLLKLADILQSDNL-QNVQ 468
D L +GS V+ SDID+CL D ++ EV+ K +L+ +L + VQ
Sbjct: 1048 DVTLTTFGSVMTGLSVNCSDIDICLRFGDGDVPPKDLTAKEVIQKTESVLRKCHLVKRVQ 1107
Query: 469 ALTRARVPIVKLMDPVTG---ISCDICINNLLAVVNTKLLRDYA--QIDVRLQQLAFIVK 523
A+ A+VPIVK ++ I DI N+LA+ NT LL++Y+ D R +LA VK
Sbjct: 1108 AIVTAKVPIVKFQVKLSNGAIIDVDISYYNILAIYNTALLKEYSLWTPDKRFAKLALFVK 1167
Query: 524 HWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG---MEKTYSVTVDDIECA 580
WAK+ + +G+LSSY +V+M I +LQ P +LP LQ + VD+ + +
Sbjct: 1168 TWAKNCEIGDASRGSLSSYCHVIMLISYLQNCDPPVLPRLQEDFRSDNRERRLVDNWDTS 1227
Query: 581 YFDQVD-KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRR 639
F QV+ L +NKES +L+ +F+Y++ D+ + V+ R +SK EK+W R
Sbjct: 1228 -FAQVETSLLQRWPKNKESCAQLLIGYFDYYSR-FDFRNFVVQCRREMILSKMEKEWPRP 1285
Query: 640 IGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNP 688
+ C+EDPF+++H+L V+K + + F + + + P
Sbjct: 1286 L-------CVEDPFDLSHNLSSGVNKKMFVFIMKVFINSRAVFMSEKPP 1327
>WB|WBGene00019628 [details] [associations]
symbol:pup-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
Pfam:PF03828 GO:GO:0008340 GO:GO:0002009 GO:GO:0040010
eggNOG:COG5260 InterPro:IPR002058 EMBL:FO081618 PIR:D88451
RefSeq:NP_498100.1 ProteinModelPortal:Q09408 SMR:Q09408
DIP:DIP-48653N STRING:Q09408 EnsemblMetazoa:K10D2.2.1
EnsemblMetazoa:K10D2.2.2 GeneID:175708 KEGG:cel:CELE_K10D2.2
UCSC:K10D2.2.1 CTD:175708 WormBase:K10D2.2
GeneTree:ENSGT00700000105235 HOGENOM:HOG000017189 InParanoid:Q09408
OMA:MEADISY NextBio:889304 Uniprot:Q09408
Length = 508
Score = 320 (117.7 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 91/272 (33%), Positives = 137/272 (50%)
Query: 418 LYLYGSCANSFGVSKSDIDVCLAINDSE----INKSEVLLKLADILQSDNLQNVQALTRA 473
L +YGS N FG D+D+ L+ + S N V+ +A L + A
Sbjct: 169 LDIYGSTRNGFGTRFCDVDMSLSFSPSPPSWATNSDRVMRAVAKALVDFPKAVDERYVNA 228
Query: 474 RVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDV-RLQQLAFIVKHWAKSRGVN 532
+VPIV+ + DI N LA+ NT+LL+ Y + D RL L VK WAK GV
Sbjct: 229 KVPIVRFRSSDMDMEADISYKNDLALHNTQLLQQYCKWDPERLPTLGVWVKAWAKRSGVG 288
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPA-ILPCLQGM--EKTYSVTVDDIECAYFDQVDKLH 589
+G+LSSYA+++M IH+LQQ P +LPCLQ M +K+ +V V Y+ VD
Sbjct: 289 DASKGSLSSYAWIVMLIHYLQQVEPIPVLPCLQEMNHQKSENVYVQGYNTYYWKFVDTAR 348
Query: 590 GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICI 649
R + S+ L F +Y+A DY++NVI + + K ++ W + + +CI
Sbjct: 349 T--RRCRASVVDLFVGFLDYYATYFDYSTNVIQMVSKKLEFKPDR-WCK------YPMCI 399
Query: 650 EDPFEVTHDLGRVVDKFSIKVLREEFERAAEI 681
DPFE H+L + VD + +R E + ++
Sbjct: 400 ADPFETDHNLAQGVDMPMFEYIRSCMEHSKKV 431
>FB|FBgn0038934 [details] [associations]
symbol:Gld2 species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007616 "long-term
memory" evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IDA]
Pfam:PF03828 EMBL:AE014297 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0046872 GO:GO:0006397 GO:GO:0043005
GO:GO:0007616 GO:GO:0003723 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 EMBL:AY122076 EMBL:BT044483
RefSeq:NP_651012.2 ProteinModelPortal:Q9VD44 SMR:Q9VD44
IntAct:Q9VD44 MINT:MINT-1691551 STRING:Q9VD44
EnsemblMetazoa:FBtr0305038 EnsemblMetazoa:FBtr0310204 GeneID:42602
KEGG:dme:Dmel_CG5732 UCSC:CG5732-RA CTD:42602 FlyBase:FBgn0038934
GeneTree:ENSGT00550000074490 InParanoid:Q9VD44 KO:K14079
OMA:RYWREFF OrthoDB:EOG40GB69 PhylomeDB:Q9VD44 GenomeRNAi:42602
NextBio:829642 Bgee:Q9VD44 Uniprot:Q9VD44
Length = 1364
Score = 332 (121.9 bits), Expect = 4.3e-26, Sum P(3) = 4.3e-26
Identities = 93/295 (31%), Positives = 148/295 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVC-LAINDSEIN-KSEVLLKL---ADILQSDNLQNV 467
+P LYL GS + FG SD+D+C LA + I+ + E + L ++L N+
Sbjct: 972 YPRYGLYLVGSSISYFGSKCSDMDICMLACTNPNIDSRMEAVYHLHVMKELLGRTNMFQD 1031
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
L ARVPI++ D + DI NN + + NT LL Y+Q+D R++ +A VK WA+
Sbjct: 1032 FNLIEARVPILRFTDRCHKVEVDINFNNSVGIRNTHLLYCYSQLDWRVRPMALTVKQWAQ 1091
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQ-RRPAILPCLQGM--EKTYSVTVDDIECAYFDQ 584
+N T+SSY+ +LM IHFLQ P +LPCL + EK + +D Y D
Sbjct: 1092 YHNINNAKNMTISSYSLMLMVIHFLQVGASPPVLPCLHNLYPEKFGLLQPNDF--GYVDM 1149
Query: 585 VDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDR 644
+ + + S N +++G L+ +F +Y++ DY IS+R G + + ND
Sbjct: 1150 NEVMAPYQSDNSQTLGDLLLSFLHYYSV-FDYGKYAISIRVGGVLPIEVCRAATAPKNDI 1208
Query: 645 HL---ICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLFEPY 696
H +CIE+PF+ T+ V D + + ++ F + + N +FE Y
Sbjct: 1209 HQWNELCIEEPFDQTNTARSVYDTDTFERIKTIFVASYRRLDSTRNLSA-IFEDY 1262
Score = 53 (23.7 bits), Expect = 4.3e-26, Sum P(3) = 4.3e-26
Identities = 32/124 (25%), Positives = 48/124 (38%)
Query: 155 HLENLKYNLDRNSQFDQPRASSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPPGFSNK 214
H EN + DRN ++Q + P + E+ + R+ Y + PPG N
Sbjct: 237 HAENAVWQFDRNYPYNQAYSPPYGIP--MMPVGFEHP--YGQRIIYPGYYNQTPPGI-NP 291
Query: 215 ARVGGSGNSRRGFEHNVDMINR----FTSSAVEG----GNG--VGLTRQLDRPGPPSGSN 264
A V G + R ++ + T S+ E GN V T + RPG G
Sbjct: 292 AAVAGLTRTNRPVTQQPHILTQPAVGTTESSEEAPATLGNAPQVSSTWRYGRPGTHRGR- 350
Query: 265 LHSV 268
H+V
Sbjct: 351 -HAV 353
Score = 48 (22.0 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 18/64 (28%), Positives = 26/64 (40%)
Query: 151 LNLNHLENLKYNLDRNSQFDQ-PRASSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPP 209
L N E+L N SQ ++ P +SS +P HRN N + + +T
Sbjct: 463 LTSNSSESLS-NSSSKSQLNKRPSSSSSISPIKHPHRNYRNRMRYTATEPTEQKAATTTV 521
Query: 210 GFSN 213
SN
Sbjct: 522 PISN 525
Score = 39 (18.8 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 150 LLNLNHLENLKYNLDRNSQFDQPRASSISNPNSFLHRNLE 189
+LN H E+L + LD+N QP S N FL E
Sbjct: 812 MLN-QHSEDLVFKLDQN----QPDGIE-SGKNIFLREITE 845
Score = 37 (18.1 bits), Expect = 4.3e-26, Sum P(3) = 4.3e-26
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 300 GYSQGGDDMDDFGEDLV---DSLLPDDESELKN 329
G S GD ++ EDLV D PD KN
Sbjct: 805 GLSCCGDMLNQHSEDLVFKLDQNQPDGIESGKN 837
>WB|WBGene00001596 [details] [associations]
symbol:gld-2 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:0006997 "nucleus organization"
evidence=IMP] [GO:0043631 "RNA polyadenylation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0031379 "RNA-directed RNA polymerase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IDA] Pfam:PF03828 GO:GO:0005524 GO:GO:0009792
GO:GO:0007126 GO:GO:0002009 GO:GO:0006898 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0006397 GO:GO:0042127
GO:GO:0040035 GO:GO:0040020 GO:GO:0006997 GO:GO:0051302
GO:GO:0043186 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 EMBL:AY125085
EMBL:FO081588 PIR:T32274 PIR:T32275 RefSeq:NP_001021844.1
RefSeq:NP_001021845.1 RefSeq:NP_491841.2 RefSeq:NP_491842.2
UniGene:Cel.9280 ProteinModelPortal:O17087 IntAct:O17087
STRING:O17087 PaxDb:O17087 PRIDE:O17087 EnsemblMetazoa:ZC308.1a
GeneID:172338 KEGG:cel:CELE_ZC308.1 UCSC:ZC308.1a CTD:172338
WormBase:ZC308.1a WormBase:ZC308.1b WormBase:ZC308.1c
WormBase:ZC308.1d InParanoid:O17087 OMA:MEDWELD NextBio:875101
GO:GO:0031379 Uniprot:O17087
Length = 1113
Score = 297 (109.6 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 78/230 (33%), Positives = 124/230 (53%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEI---NKSEVLLKLA-DILQSDNLQNVQ 468
+P + LY+ GS N FG + SD+D+CL I + ++ N + V+L L LQ + Q
Sbjct: 585 FPLSGLYVVGSSLNGFGNNSSDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQ 644
Query: 469 ALTRARVPIVKL--MDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
L A+VPI+++ P I+ D+ NN +A+ NT LL Y+ D R++ L +VK WA
Sbjct: 645 KLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWA 704
Query: 527 KSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQ-GMEKTYSVTVD----DIECAY 581
K +G+N + + +SY+ VLM IHFLQ +LP LQ +S VD ++ A
Sbjct: 705 KRKGINDANKSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMAL 764
Query: 582 FDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISK 631
+ D + S K ++G L+ F +Y+A +Y + IS+R G + +
Sbjct: 765 EEVADDIDQSLSE-KTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVER 813
Score = 61 (26.5 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 647 ICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLFE 694
+CIE+PF ++ + D+ + +++ F A +QH+ + KL E
Sbjct: 871 VCIEEPFTNSNTAHSIYDEMVFEAIKKAFREAHGELQHN-HDLDKLME 917
Score = 45 (20.9 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 165 RNSQFDQ-PRASSISN-PNSF-LHRNLENSREHD-LRLGKQHYGSTPPPGFSNKAR-VGG 219
R+ QF P+ S S P + L + + D L L +Q++ + P F K+ VG
Sbjct: 364 RSFQFHNWPQMSHGSYYPMPYHLENQMRPMKSGDQLPLNQQNHNLSGFPAFVGKSSLVGS 423
Query: 220 SGNSRRGFEHNVDMINRFTSSAVEGGNGVGLTRQLD 255
S N+R E + + + R + G + +D
Sbjct: 424 SLNTRNSSEADPEEMPRIMEKLDDEVTGADHDKTID 459
Score = 44 (20.5 bits), Expect = 5.1e-24, Sum P(3) = 5.1e-24
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 140 FGSFQVQPDSLLNLNHLENLKYNLDRNSQFDQP-----RASSISNPNSFLHRNLENSREH 194
+G++ V+ S + + L + N N QP A S+ N H+ ++ + H
Sbjct: 143 YGTYSVRRSSPPSPSALSSSTANSTSNRAPTQPPILLRHAEPASDKN---HQGSDHEQNH 199
Query: 195 DLRLGKQHYGSTPPPGFS 212
D ++ T P G++
Sbjct: 200 DPKIHLYRSAGTAPGGYT 217
Score = 38 (18.4 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 333 ERNDKKHRNSRDKEIRSDNR 352
ERND+ R +R + S +R
Sbjct: 11 ERNDEHTRRNRSPSVDSVSR 30
Score = 38 (18.4 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 27/125 (21%), Positives = 49/125 (39%)
Query: 161 YNLDRNSQFDQ--PRASSISNPNS--FLHRNLENSRE-HDLRLGKQHYGSTPPPGFSNKA 215
YN N Q+ Q PR +S S + + + + N R+ ++ + G + Y +
Sbjct: 41 YNQQSNHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQNG 100
Query: 216 RVGGS-GNSRRGFEHNVD---MINRFT------SSAVEGGNGVGLTRQLDRPGPPSGSNL 265
G+ G + + N + + +++ G G T + R PPS S L
Sbjct: 101 EYSGNQGCVPKYHQRNQNYPQLQPKYSYFQPHQRPIFNSTQGYG-TYSVRRSSPPSPSAL 159
Query: 266 HSVSA 270
S +A
Sbjct: 160 SSSTA 164
>UNIPROTKB|O17087 [details] [associations]
symbol:gld-2 "Poly(A) RNA polymerase gld-2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF03828 GO:GO:0005524 GO:GO:0009792
GO:GO:0007126 GO:GO:0002009 GO:GO:0006898 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0006397 GO:GO:0042127
GO:GO:0040035 GO:GO:0040020 GO:GO:0006997 GO:GO:0051302
GO:GO:0043186 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 EMBL:AY125085
EMBL:FO081588 PIR:T32274 PIR:T32275 RefSeq:NP_001021844.1
RefSeq:NP_001021845.1 RefSeq:NP_491841.2 RefSeq:NP_491842.2
UniGene:Cel.9280 ProteinModelPortal:O17087 IntAct:O17087
STRING:O17087 PaxDb:O17087 PRIDE:O17087 EnsemblMetazoa:ZC308.1a
GeneID:172338 KEGG:cel:CELE_ZC308.1 UCSC:ZC308.1a CTD:172338
WormBase:ZC308.1a WormBase:ZC308.1b WormBase:ZC308.1c
WormBase:ZC308.1d InParanoid:O17087 OMA:MEDWELD NextBio:875101
GO:GO:0031379 Uniprot:O17087
Length = 1113
Score = 297 (109.6 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 78/230 (33%), Positives = 124/230 (53%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEI---NKSEVLLKLA-DILQSDNLQNVQ 468
+P + LY+ GS N FG + SD+D+CL I + ++ N + V+L L LQ + Q
Sbjct: 585 FPLSGLYVVGSSLNGFGNNSSDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQ 644
Query: 469 ALTRARVPIVKL--MDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
L A+VPI+++ P I+ D+ NN +A+ NT LL Y+ D R++ L +VK WA
Sbjct: 645 KLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSVVKEWA 704
Query: 527 KSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQ-GMEKTYSVTVD----DIECAY 581
K +G+N + + +SY+ VLM IHFLQ +LP LQ +S VD ++ A
Sbjct: 705 KRKGINDANKSSFTSYSLVLMVIHFLQCGPTKVLPNLQQSYPNRFSNKVDVRTLNVTMAL 764
Query: 582 FDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISK 631
+ D + S K ++G L+ F +Y+A +Y + IS+R G + +
Sbjct: 765 EEVADDIDQSLSE-KTTLGELLIGFLDYYANEFNYDRDAISIRQGRRVER 813
Score = 61 (26.5 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 647 ICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLFE 694
+CIE+PF ++ + D+ + +++ F A +QH+ + KL E
Sbjct: 871 VCIEEPFTNSNTAHSIYDEMVFEAIKKAFREAHGELQHN-HDLDKLME 917
Score = 45 (20.9 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 165 RNSQFDQ-PRASSISN-PNSF-LHRNLENSREHD-LRLGKQHYGSTPPPGFSNKAR-VGG 219
R+ QF P+ S S P + L + + D L L +Q++ + P F K+ VG
Sbjct: 364 RSFQFHNWPQMSHGSYYPMPYHLENQMRPMKSGDQLPLNQQNHNLSGFPAFVGKSSLVGS 423
Query: 220 SGNSRRGFEHNVDMINRFTSSAVEGGNGVGLTRQLD 255
S N+R E + + + R + G + +D
Sbjct: 424 SLNTRNSSEADPEEMPRIMEKLDDEVTGADHDKTID 459
Score = 44 (20.5 bits), Expect = 5.1e-24, Sum P(3) = 5.1e-24
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 140 FGSFQVQPDSLLNLNHLENLKYNLDRNSQFDQP-----RASSISNPNSFLHRNLENSREH 194
+G++ V+ S + + L + N N QP A S+ N H+ ++ + H
Sbjct: 143 YGTYSVRRSSPPSPSALSSSTANSTSNRAPTQPPILLRHAEPASDKN---HQGSDHEQNH 199
Query: 195 DLRLGKQHYGSTPPPGFS 212
D ++ T P G++
Sbjct: 200 DPKIHLYRSAGTAPGGYT 217
Score = 38 (18.4 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 333 ERNDKKHRNSRDKEIRSDNR 352
ERND+ R +R + S +R
Sbjct: 11 ERNDEHTRRNRSPSVDSVSR 30
Score = 38 (18.4 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 27/125 (21%), Positives = 49/125 (39%)
Query: 161 YNLDRNSQFDQ--PRASSISNPNS--FLHRNLENSRE-HDLRLGKQHYGSTPPPGFSNKA 215
YN N Q+ Q PR +S S + + + + N R+ ++ + G + Y +
Sbjct: 41 YNQQSNHQYQQSHPRRTSFSRDGNTGYYNNHSGNKRQTYNNQRGGRSYNHRGNSNYQQNG 100
Query: 216 RVGGS-GNSRRGFEHNVD---MINRFT------SSAVEGGNGVGLTRQLDRPGPPSGSNL 265
G+ G + + N + + +++ G G T + R PPS S L
Sbjct: 101 EYSGNQGCVPKYHQRNQNYPQLQPKYSYFQPHQRPIFNSTQGYG-TYSVRRSSPPSPSAL 159
Query: 266 HSVSA 270
S +A
Sbjct: 160 SSSTA 164
>UNIPROTKB|E1C833 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0071044 "histone mRNA catabolic
process" evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 OMA:NQKTEAR
EMBL:AADN02046111 EMBL:AADN02046112 EMBL:AADN02046113
EMBL:AADN02046114 EMBL:AADN02046115 EMBL:AADN02046116
IPI:IPI00587880 Ensembl:ENSGALT00000023911 Uniprot:E1C833
Length = 496
Score = 300 (110.7 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 86/281 (30%), Positives = 143/281 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEIN-KSEV--LLKLADILQSDNLQNV-- 467
+P +RL+L GS N FG SD D+CL I + +N K+E +L L L S L +
Sbjct: 208 FPCSRLFLVGSSLNGFGTRTSDGDLCLVIKEEPVNQKTEARHILSLVQKLFSTKLSSYIE 267
Query: 468 -QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYA-QIDVRLQQLAFIVKHW 525
L RA+VPIVK D V+ + D+ +NN++ + NT LLR YA + + L W
Sbjct: 268 RPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYNYENSVHMLKHSTSVW 327
Query: 526 AKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDD-IECAYFDQ 584
++ R + + T + +LM + ++ ILP LQ K Y + D ++ Q
Sbjct: 328 SR-RALPEAARTTAENSRLLLMVLVYVVALPEPILPSLQ---KNYPESFDPTMQLHLVHQ 383
Query: 585 VD-KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEK-DWTRRIGN 642
+ + S+N+ S+G L+ FF Y+A D++ +ISVR I + + +W +
Sbjct: 384 APCTIPPYLSKNESSLGELLIGFFKYYATEFDWSHQMISVREAKAIPRPDDIEWRNKY-- 441
Query: 643 DRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQ 683
IC+E+PF+ T+ V +K ++EEF ++ +I++
Sbjct: 442 ----ICVEEPFDRTNTARAVHEKQKFDTIKEEFLKSWQILR 478
>TAIR|locus:2102709 [details] [associations]
symbol:AT3G45750 "AT3G45750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GO:GO:0016740 eggNOG:COG5260
EMBL:BT008622 EMBL:AK229682 IPI:IPI00523946 RefSeq:NP_190161.2
UniGene:At.35992 ProteinModelPortal:Q7Y216 SMR:Q7Y216
EnsemblPlants:AT3G45750.1 GeneID:823717 KEGG:ath:AT3G45750
TAIR:At3g45750 InParanoid:Q7Y216 OMA:WREEERY PhylomeDB:Q7Y216
ProtClustDB:CLSN2680887 ArrayExpress:Q7Y216 Genevestigator:Q7Y216
Uniprot:Q7Y216
Length = 682
Score = 292 (107.8 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 87/274 (31%), Positives = 140/274 (51%)
Query: 418 LYLYGSCANSFGVSKSDIDVCLAIND--SEI---NKSEVLLKLADILQS----DNLQNVQ 468
L YGS S+SD+DV + + SEI K E+L + A L+S ++NV+
Sbjct: 89 LEAYGSFVMDMYSSQSDLDVSINFGNGTSEIPREKKLEILKRFAKKLRSLQGEGQVKNVE 148
Query: 469 ALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKS 528
++ A+VPIVK D TG+ CD+ + N ++N++++R +QID R Q+L +VKHWAK+
Sbjct: 149 SIFSAKVPIVKFSDQGTGVECDLSVENKDGILNSQIVRIISQIDGRFQKLCLLVKHWAKA 208
Query: 529 RGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDKL 588
VN TL+S + L+ LQ + P ILP + K + ++E + K
Sbjct: 209 HEVNSALHRTLNSVSITLLVALHLQTQNPPILPPFSMLLKD-GMDPPNVE----KRAQKF 263
Query: 589 HGFGSRNKESIGRLVWAFF-NYWAYGHDYASNV-ISVRTGSTISKQEKDWTRRIGNDRHL 646
+G RN+ES+GRL FF + + + +SV G ISK+ W +++G
Sbjct: 264 LNWGQRNQESLGRLFATFFIKLQSVEFLWRQGLCVSVLNGLWISKK---W-KKVGVGS-- 317
Query: 647 ICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAE 680
I +ED ++ ++ R V+ K + R E
Sbjct: 318 ISVEDFTNISQNVARRVNGAGAKKIYSSINRTVE 351
>POMBASE|SPAC17H9.01 [details] [associations]
symbol:cid16 "poly(A) polymerase Cid16 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002934 Pfam:PF01909
PomBase:SPAC17H9.01 Pfam:PF03828 GO:GO:0005737 EMBL:CU329670
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CU329670_GR
eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058 PIR:T37867
RefSeq:NP_593571.1 ProteinModelPortal:O13798
EnsemblFungi:SPAC17H9.01.1 GeneID:2542188 KEGG:spo:SPAC17H9.01
OrthoDB:EOG40W00S NextBio:20803258 Uniprot:O13798
Length = 1202
Score = 281 (104.0 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 83/282 (29%), Positives = 141/282 (50%)
Query: 417 RLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQS---DNLQNVQALTRA 473
++ +GS SD+D L I S+ E LL D ++S + NV + A
Sbjct: 923 KIACFGSYRTGLMTKNSDLD--LVIYSSK----EALLPYYDRVKSIIKNEFSNVMPIRGA 976
Query: 474 RVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNV 533
R+PI+K I CD+ +NLL + N+ L+ +Y+ ID R++ L +VK+WA +R ++
Sbjct: 977 RIPIIKFTGQYN-IHCDLSFDNLLPIHNSDLILNYSLIDERVKTLLMLVKYWASNRLIDK 1035
Query: 534 TYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDD-----IECAYFDQVDKL 588
T+ SSY + +M I +LQQ ILP LQ + YS V D + C + +
Sbjct: 1036 THHAFPSSYTWCIMVIFYLQQIPEPILPNLQKLSTQYSKIVRDNDYGNVNCWFNRDTECY 1095
Query: 589 HGFGSRNKESIGRLVWAFFNYWA----YGHDYASNVISVRTGSTISKQEKDWTRRIGNDR 644
G + +++I L+ FF Y+ Y D+ + +I + + S + ++ ++ D
Sbjct: 1096 RGSMQKGRKNIALLLRGFFCYYGLTTQYSFDWEAYMIDI-SSSQLKRKSTEF-----KDC 1149
Query: 645 HLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDP 686
+ + DPF +L + + + S+KV+R E ERA I+ DP
Sbjct: 1150 PFVVL-DPFLKKKNLTKALTQKSVKVVRYELERACRILS-DP 1189
>FB|FBgn0260780 [details] [associations]
symbol:wisp "wispy" species:7227 "Drosophila melanogaster"
[GO:0007017 "microtubule-based process" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0035046
"pronuclear migration" evidence=IMP] [GO:0007344 "pronuclear
fusion" evidence=IMP] [GO:0035044 "sperm aster formation"
evidence=IMP] [GO:0007056 "spindle assembly involved in female
meiosis" evidence=IMP] [GO:0007343 "egg activation" evidence=IMP]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0002805 "regulation of
antimicrobial peptide biosynthetic process" evidence=IMP]
Pfam:PF03828 GO:GO:0005524 GO:GO:0035046 GO:GO:0005737
GO:GO:0007052 GO:GO:0046872 EMBL:AE014298 GO:GO:0006378
GO:GO:0003723 GO:GO:0001556 GO:GO:0008298 GO:GO:0002805
GO:GO:0007344 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0007343 GeneTree:ENSGT00550000074490 KO:K14079
RefSeq:NP_572766.1 UniGene:Dm.6637 ProteinModelPortal:Q9VYS4
SMR:Q9VYS4 IntAct:Q9VYS4 MINT:MINT-300598 STRING:Q9VYS4
PRIDE:Q9VYS4 EnsemblMetazoa:FBtr0073573 GeneID:32152
KEGG:dme:Dmel_CG15737 UCSC:CG15737-RA CTD:32152 FlyBase:FBgn0260780
InParanoid:Q9VYS4 OMA:DSSDIDM OrthoDB:EOG4S7H5K PhylomeDB:Q9VYS4
GenomeRNAi:32152 NextBio:777126 Bgee:Q9VYS4 GO:GO:0035044
GO:GO:0007056 Uniprot:Q9VYS4
Length = 1373
Score = 277 (102.6 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 74/237 (31%), Positives = 125/237 (52%)
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
L ARVPI++ D GI D+ NN + + NT LL+ YAQ+D R + L IVK WA+
Sbjct: 1083 LIEARVPILRFKDISNGIEVDLNFNNCVGIKNTYLLQLYAQMDWRTRPLVVIVKLWAQYH 1142
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQQRR-PAILPCLQGM--EKTYSVTVDDIECAYFDQVD 586
+N + T+SSY+ VLM +H+LQ P +LPCL + EK + + D C D ++
Sbjct: 1143 DINDAKRMTISSYSLVLMVLHYLQHACVPHVLPCLHSLYPEK-FQLGQQD--CLDLDLIE 1199
Query: 587 KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHL 646
+ + + N +++G + FF Y++ D+ + IS+RTG + + ND +
Sbjct: 1200 PIEPYQALNTQTLGEHLLGFFKYYST-FDFRNFAISIRTGGVLPVSTCRMAKSPKNDVYQ 1258
Query: 647 ---ICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLFEP--YVP 698
+ IE+PF++++ V D + + ++ F +A + H + +F P +VP
Sbjct: 1259 WKELNIEEPFDLSNTARSVYDGPTFERVKAVFLISARRLDHTLD-LATIFRPIHHVP 1314
Score = 62 (26.9 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 417 RLYLYGSCANSFGVSKSDIDVCL 439
R+ L GS FG SDID+CL
Sbjct: 1012 RICLVGSTITGFGTDSSDIDMCL 1034
Score = 37 (18.1 bits), Expect = 9.3e-21, Sum P(3) = 9.3e-21
Identities = 14/64 (21%), Positives = 22/64 (34%)
Query: 162 NLDRNSQFDQPRASSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPPGFSNKARVGGSG 221
N R+ Q S +RN +N + + H P F K GSG
Sbjct: 450 NFSRHQYGHQSTGSGYQQQQQ-RYRNAQNVYQQYQHQQQHHAQQHTHPHFRRKHSDNGSG 508
Query: 222 NSRR 225
+++
Sbjct: 509 INKK 512
>TAIR|locus:2102714 [details] [associations]
symbol:AT3G45760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP002686 GO:GO:0016740 IPI:IPI00532663 RefSeq:NP_190162.4
UniGene:At.53771 ProteinModelPortal:F4J6R3 SMR:F4J6R3
EnsemblPlants:AT3G45760.1 GeneID:823719 KEGG:ath:AT3G45760
OMA:NTMSIAS Uniprot:F4J6R3
Length = 474
Score = 269 (99.8 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 71/201 (35%), Positives = 110/201 (54%)
Query: 418 LYLYGSCA-NSFGVSKSDIDVCLAIND--SEI---NKSEVLLKLADILQSDN----LQNV 467
L YGS A N+F S+ D+DV + + SE K E+L + A L+S ++NV
Sbjct: 89 LEAYGSFAMNTFS-SQKDLDVSINFSSGTSEFYREKKLEILTRFATKLRSLEGQGFVRNV 147
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+ ARVPIV+ D TGI CD+ + + ++ ++++R +QID R Q+L ++KHWA+
Sbjct: 148 VPILSARVPIVRFCDQGTGIECDLTVESKDGILTSQIIRIISQIDDRFQKLCLLIKHWAR 207
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFDQ-VD 586
+ GVN TL+S + ++ H LQ + P ILP + K D I+ ++
Sbjct: 208 AHGVNNASHNTLNSISITMLVAHHLQTQSPPILPPFSTLFK------DGIDPPIVEKRTQ 261
Query: 587 KLHGFGSRNKESIGRLVWAFF 607
K +G RN+ES+GRL FF
Sbjct: 262 KFLNWGQRNQESLGRLFATFF 282
>ZFIN|ZDB-GENE-050706-68 [details] [associations]
symbol:tut1 "terminal uridylyl transferase 1, U6
snRNA-specific" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA;ISS] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR007087 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 ZFIN:ZDB-GENE-050706-68
GO:GO:0005524 GO:GO:0005730 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
GO:GO:0006379 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0050265 GO:GO:0016180 HOGENOM:HOG000115998 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB EMBL:BC098614 IPI:IPI00619608
RefSeq:NP_001025359.1 UniGene:Dr.80967 ProteinModelPortal:Q4KMD7
GeneID:564388 KEGG:dre:564388 InParanoid:Q4KMD7 NextBio:20885359
ArrayExpress:Q4KMD7 Uniprot:Q4KMD7
Length = 797
Score = 240 (89.5 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 67/208 (32%), Positives = 116/208 (55%)
Query: 432 KSDIDVCLAINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTGISC 489
+S+ + I+ S + +E+L +A IL+ + VQAL+ AR+P+VK +
Sbjct: 248 RSEDSILSDIDLSTASPAEILELVAVILRKCVPGVHKVQALSTARLPVVKFSHKELNLQG 307
Query: 490 DICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGV--NVTYQGTL-SSYAYVL 546
DI INN LAV NTK L+ + ID RL+ L + ++ WAK + + N++ G L ++YA L
Sbjct: 308 DITINNRLAVRNTKFLQLCSGIDSRLRPLVYTIRLWAKQKQLAGNLSGPGPLLNNYALTL 367
Query: 547 MCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAY--FDQVDKLHGFG---SRNKESIGR 601
+ I FLQ R P +LP + ++ ++ ++ ECA +D F S+N E +
Sbjct: 368 LVIFFLQNRDPPVLPSVNQLK---NMACEEEECAIEEWDCTFPSQPFSVPPSKNTEDLCT 424
Query: 602 LVWAFFNYWAYGHDYASNVISVRTGSTI 629
L++ FF +++ D+ ++V+S+R G +
Sbjct: 425 LLFGFFTFYSK-FDFPASVVSLRDGHVL 451
Score = 82 (33.9 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 31/129 (24%), Positives = 56/129 (43%)
Query: 322 DDESELKNDTHERNDKKHR-NSRDK-EIRSDNRGKRLLSQRMRNL-KWQIE-CRADIGRL 377
D ++ L H+ N K R R+K E + +RGK+ + +L K E C+A +
Sbjct: 102 DVQTTLAQPQHQLNGLKLRVKPREKKEFKLASRGKQDCKNTLISLDKLNFELCKAM--SV 159
Query: 378 NAPFLAIYESLIPAXXXXXXXXXXXXXXXXXXXXXWPDARLYLYGSCANSFGVSKSDIDV 437
N + ESL +PD ++ +GS N+FG+ D+D+
Sbjct: 160 NEQIQKVVESLELKDNEKKVRDLLVQLLQEVFTEFFPDCQIVPFGSSVNTFGLHSCDLDL 219
Query: 438 CLAINDSEI 446
L + ++++
Sbjct: 220 FLDLENTKV 228
>WB|WBGene00009284 [details] [associations]
symbol:F31C3.2 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] Pfam:PF03828 GO:GO:0045132
InterPro:IPR002058 EMBL:Z92784 GeneTree:ENSGT00550000074490
EMBL:Z81526 UniGene:Cel.7025 GeneID:173373 KEGG:cel:CELE_F31C3.2
CTD:173373 NextBio:879379 RefSeq:NP_001021434.1
ProteinModelPortal:G5EFR3 SMR:G5EFR3 IntAct:G5EFR3 PRIDE:G5EFR3
EnsemblMetazoa:F31C3.2b WormBase:F31C3.2b OMA:PFDAINT
Uniprot:G5EFR3
Length = 808
Score = 258 (95.9 bits), Expect = 4.8e-19, Sum P(3) = 4.8e-19
Identities = 72/223 (32%), Positives = 114/223 (51%)
Query: 470 LTRARVPIVKLM--DPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
L A+VPIVK++ GI DI +NN+ + N+ L+ Y+ D RL LA +VKHWA
Sbjct: 578 LVPAKVPIVKMILNGEFDGIEVDINVNNIAGIYNSHLIHYYSLTDARLPALALLVKHWAM 637
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQQR-RPAILPCLQGM-EKTYSVTVDDIECAYF-DQ 584
G+N G L+SY +L+ +H+LQ PA++P LQ + + + E F D
Sbjct: 638 VTGINNAQDGFLNSYTTILLVVHYLQCGVTPAVIPNLQYLFPHKFDRKLPLNELLLFGDI 697
Query: 585 VDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDR 644
DKL N S+G L+ FF Y+ D+ + S+R+G I ++ + R + N
Sbjct: 698 ADKLPT-SPPNTWSLGELLIGFFQYYNE-FDFTNFGFSIRSGQVIPRE--NLPRDLINSP 753
Query: 645 HLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPN 687
I +E+PF+ + V D +K ++ F A +I+ + N
Sbjct: 754 --IVVEEPFDAINTARTVRDVSHMKSIKSAFRCAVQIISSNKN 794
Score = 52 (23.4 bits), Expect = 4.8e-19, Sum P(3) = 4.8e-19
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 413 WPDARLYLY--GSCANSFGVSKSDIDVCL 439
+PD + L GS N G SD+D+CL
Sbjct: 499 FPDTEIKLQTTGSTVNGCGSFNSDMDLCL 527
Score = 41 (19.5 bits), Expect = 4.8e-19, Sum P(3) = 4.8e-19
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 309 DDFGEDLVDSLLPDDESELKNDTHERND 336
D+ G D+VD +DE E ++ E D
Sbjct: 345 DEIG-DIVDEWDANDEEEKTDELEELED 371
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 262 (97.3 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 81/276 (29%), Positives = 129/276 (46%)
Query: 415 DARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNV-QALTRA 473
D+ + LYGS + SD+DV IN +E N+ L ++ L+S L + + A
Sbjct: 377 DSSIQLYGSFLTGLSLEGSDLDVNFKINQNE-NQVTHLEVVSKYLESTKLYTIIEKRLSA 435
Query: 474 RVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNV 533
VPI++ ++ + D+ N+ A N+ LL++Y ID R L+ +VK WA + +N
Sbjct: 436 TVPIIRFVEKSSKYHFDMSCNSSKAYFNSLLLKEYCSIDNRYIILSLLVKWWASCKNLND 495
Query: 534 TYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGME----KTYSVT-----VDDIECAYFDQ 584
+ T SS+ V M IHFLQ ILP LQ +YS +D E F
Sbjct: 496 ASKHTFSSFCLVNMVIHFLQSISTPILPNLQTKSPQLLNSYSTNPILKRIDSFEFYEFKS 555
Query: 585 VDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRT---GSTISKQEKDWTRR-- 639
DK S+NK I +L + FFNY++ +Y N+IS+ G T+ K R
Sbjct: 556 FDKFDS--SKNKLKIDQLFYLFFNYYSI-FNYKENIISISHSSGGGTLCKNGPLLKRSSL 612
Query: 640 IGND--RHLICIEDPFEVTHDLGRVVDKFSIKVLRE 673
+ D + + + DPF ++ + +++ E
Sbjct: 613 VNEDLLKSTMIVLDPFVTDRNIASSIQNSFFRIIVE 648
Score = 42 (19.8 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 297 NGPGYSQGGDDMDDFGEDLVDSLLPDDESELKND--THERNDKKHRNSRDKEIRSD 350
N Y+ D+ +D +D D DD+ + ND T N K N E R +
Sbjct: 230 NNNNYNNNNDNDNDDDDDDDDD---DDDDDENNDEITIFNNIYKEFNENKTESRKN 282
Score = 42 (19.8 bits), Expect = 8.1e-17, Sum P(3) = 8.1e-17
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 306 DDMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSD 350
DD DD +D D +DE + N+ ++ ++ SR K I D
Sbjct: 243 DDDDDDDDDDDDDDENNDEITIFNNIYKEFNENKTESR-KNIGDD 286
Score = 38 (18.4 bits), Expect = 8.1e-17, Sum P(3) = 8.1e-17
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 167 SQFDQPRASSISNPNSFL---HRNLENSREHD 195
+Q +P ++S SN NS + N N+ ++D
Sbjct: 210 TQTQKPTSNSNSNSNSNTLNNNNNYNNNNDND 241
>UNIPROTKB|F1NBW0 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0002134 "UTP binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0071044
"histone mRNA catabolic process" evidence=IEA] Pfam:PF03828
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0000287 GO:GO:0006378 GO:GO:0030145
GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 OMA:VRCWARA
EMBL:AADN02000527 EMBL:AADN02000528 IPI:IPI00597569
Ensembl:ENSGALT00000011888 Uniprot:F1NBW0
Length = 518
Score = 231 (86.4 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 54/192 (28%), Positives = 104/192 (54%)
Query: 450 EVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRD 507
++L + D L + +VQ + AR P+VK TG CD+ ++N +A+ ++LL
Sbjct: 227 KILSIIGDCLDNFGPGYSSVQKILNARCPLVKFSHQPTGFQCDLSVSNSIAIRCSELLYI 286
Query: 508 YAQIDVRLQQLAFIVKHWAKSRGVNVTYQGT-LSSYAYVLMCIHFLQQRRPAILPCLQGM 566
Y +D R++ L F ++ WA+ G+ + GT +++++ +M + FLQ+R P I+P L +
Sbjct: 287 YGCLDPRVRALVFSLRCWARVHGLTNSVPGTWITNFSLTMMIMFFLQKRSPPIIPTLDQL 346
Query: 567 -----EKTYSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVI 621
EK V + +C++ + K+ ++N E++ L+ FF Y+ D+ N +
Sbjct: 347 KELADEKDKHV-IGGYDCSFVSDLSKIKP--TKNTETLDELLCDFFQYFG-NFDFRKNSL 402
Query: 622 SVRTGSTISKQE 633
++R G ++K E
Sbjct: 403 NLRKGKEVNKPE 414
Score = 58 (25.5 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLK 454
+PD+ + +GS N+FG D+D+ L +D I K +K
Sbjct: 166 FPDSTVKPFGSSVNTFGKLGCDVDMFLDFHD--IQKHATKMK 205
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 258 (95.9 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 62/220 (28%), Positives = 113/220 (51%)
Query: 417 RLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQALTRARVP 476
+L ++GS + + +SDIDV E + +++ L N + ++ ARVP
Sbjct: 4252 KLNIFGSFLSGLSLGESDIDVNFTTTQKE--DISTIKQVSSFLHKKNYELIETRLEARVP 4309
Query: 477 IVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQ 536
I++ +D + D+C N+ + N+ L++DY +D R++ L ++K WA ++ +N Q
Sbjct: 4310 IIRFIDTDVNVRFDMCFNSFMGQHNSLLIKDYTMVDSRVKPLIILIKWWASTKCLNDASQ 4369
Query: 537 GTLSSYAYVLMCIHFLQQRRPAILPCLQG-----MEKTY-----SVTVDDIECAYFDQVD 586
+ SSY + + IHFLQ P +LP LQ ++T + V++ Y+D
Sbjct: 4370 ESFSSYCLINLIIHFLQSLSPPVLPNLQEPSPFHFDETKIKLKANCRVENNVVKYYDWTS 4429
Query: 587 KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTG 626
L + N+ +IG+L++ FF Y+ +Y +VIS+ G
Sbjct: 4430 -LDFTSADNRLNIGQLLFKFFQYYCT-FNYNEDVISISRG 4467
Score = 56 (24.8 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 24/98 (24%), Positives = 38/98 (38%)
Query: 152 NLNHLENLKYNLDRNSQFDQPRA--SSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPP 209
N N+ N YN N+ D +N N + N+E+ ++ K+++
Sbjct: 3044 NYNNEYNGYYNKSYNNNNDNGEEYHDDNNNNNEEDNENIEDLEWNNENFDKKYFNVPSVS 3103
Query: 210 GFSNKARVGGSGNSRRGFEHNVDMINRFTSSAVEGGNG 247
F+ GG G+S HN + N SS NG
Sbjct: 3104 SFTYVPGGGGGGSSN----HNDNSKNNNNSSKKNNKNG 3137
Score = 54 (24.1 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 303 QGGDDMDDFGEDLVDSLLPDDESE-LKNDTHERNDKKHRNS 342
+ +D DD ED + D+E E +ND +N+ K+ N+
Sbjct: 1169 ENDNDDDDEDEDEDEENEEDEEDESYENDIDNKNNNKNNNN 1209
Score = 48 (22.0 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 16/82 (19%), Positives = 32/82 (39%)
Query: 162 NLDRNSQFDQPRASSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPPGFSNKARVGGSG 221
N S+FD SIS+ N+ ++ N N+ ++ + + +N +
Sbjct: 1879 NKQNYSEFDDN--DSISSSNNIINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1936
Query: 222 NSRRGFEHNVDMINRFTSSAVE 243
N+ N ++N S+ E
Sbjct: 1937 NNNNNNNQNEIIVNPIQSNRKE 1958
Score = 47 (21.6 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 10/55 (18%), Positives = 26/55 (47%)
Query: 297 NGPGYSQGGDDMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDN 351
N Y++ G + D D +D+ ++ + N+ + N+ + N+ + ++N
Sbjct: 2949 NDDVYNKDGYNGDYNDSDYIDNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNEN 3003
Score = 46 (21.3 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 301 YSQGGDDMDDFGE-----DLVD--SLLPD---DESELKNDTHERNDKKHRNSRDKE 346
YS +D+++ E DL++ L+ D D+S+ ++ + E N+ K N D E
Sbjct: 3957 YSINSNDIENLREQTIQFDLINPQGLITDFGNDDSDSEHGSEELNEIKFLNKEDDE 4012
Score = 44 (20.5 bits), Expect = 2.2e-15, Sum P(4) = 2.2e-15
Identities = 7/30 (23%), Positives = 18/30 (60%)
Query: 322 DDESELKNDTHERNDKKHRNSRDKEIRSDN 351
DD++ +ND ++ N+ + N+ + ++N
Sbjct: 2824 DDDNNDENDNNDDNNNYNNNNNNNNNNNNN 2853
Score = 41 (19.5 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 313 EDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIR 348
ED++ S PD EL+N + + K R E R
Sbjct: 26 EDII-SKYPDFNDELENAKYVLAESKDEQDRTFEQR 60
Score = 41 (19.5 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 320 LPDDESELKNDTHERNDKKHRNSRDKEIRSDN 351
L +D+ + ND ++ ND + + + ++N
Sbjct: 2819 LDNDDDDDNNDENDNNDDNNNYNNNNNNNNNN 2850
Score = 39 (18.8 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 139 RFGSFQVQPDSLLNLN 154
RFGSF+ + +L+++N
Sbjct: 1599 RFGSFKSKLPNLISIN 1614
Score = 39 (18.8 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 96 SSTENQQQRLLCEDFGRLGF 115
+ T QR++ ED +GF
Sbjct: 2341 AKTHRDLQRIIVEDVNPIGF 2360
Score = 39 (18.8 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 313 EDLVDSLLPDDESELKNDTHERNDKKHRN 341
E ++++ + D+E ND +N+ ++ N
Sbjct: 1274 ETIIENFV-DNEESFYNDYSGKNENQNNN 1301
Score = 39 (18.8 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 10/48 (20%), Positives = 25/48 (52%)
Query: 148 DSLLNLNHLENLKYNLDRNSQFDQPRASSISNPNSFLHRNLENSREHD 195
DS+ + N++ N N + N+ + ++ +N N+ + N N+ ++
Sbjct: 1890 DSISSSNNIINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 1937
Score = 39 (18.8 bits), Expect = 6.9e-15, Sum P(4) = 6.9e-15
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 297 NGPGYSQGGDDMDDFGEDLVDSLLPDD----ESELKNDTHERNDKKHRN 341
N Y+ D D+ D DS +D +E ND + ND + N
Sbjct: 2883 NNENYNDNYTDNDNNNND--DSYNNNDGGDYNNENYNDNYTDNDNNNNN 2929
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 327 LKNDTHERNDKKHRNSRDKEIRSDNRGKRL 356
+ N + N+K + N+ + + N K +
Sbjct: 2755 INNSNNSNNNKNNNNNNNNNNNNKNNKKSI 2784
Score = 37 (18.1 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 9/47 (19%), Positives = 24/47 (51%)
Query: 306 DDMDDFGEDLVDSL-LPDDESELKNDTHERNDKKHRNSRDKEIRSDN 351
DD +D ++ D+ ++ + N+ + N+ + N+ + + +DN
Sbjct: 2825 DDNNDENDNNDDNNNYNNNNNNNNNNNNNNNNNNNNNNNNNDNYNDN 2871
>UNIPROTKB|E9PKX1 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002934 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0008270 GO:GO:0003676 EMBL:AL513218
InterPro:IPR002058 GO:GO:0016779 EMBL:AL138849 HGNC:HGNC:28981
ChiTaRS:ZCCHC11 EMBL:AL591167 IPI:IPI00976712
ProteinModelPortal:E9PKX1 SMR:E9PKX1 Ensembl:ENST00000484723
ArrayExpress:E9PKX1 Bgee:E9PKX1 Uniprot:E9PKX1
Length = 906
Score = 219 (82.2 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 49/153 (32%), Positives = 84/153 (54%)
Query: 414 PDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ-NVQALTR 472
P+ L LYGS F + SD+++ + ++N ++L+K+ IL+ + L +V++
Sbjct: 151 PECSLRLYGSSLTRFALKSSDVNIDIKF-PPKMNHPDLLIKVLGILKKNVLYVDVESDFH 209
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VP+V D +G+ C + N +A + T LL +I+ L ++WAK ++
Sbjct: 210 AKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIEPVFIPLVLAFRYWAKLCYID 269
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG 565
G + SY + LM + FLQQR+P +LPCL G
Sbjct: 270 SQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLG 302
Score = 208 (78.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 48/117 (41%), Positives = 71/117 (60%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAI----NDSEINKSEVLLKLADILQSD-NLQNVQAL 470
ARL L+GS N FG SD+D+C+ + N ++N E++ LA IL+ L+N+ +
Sbjct: 750 ARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI 809
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
T A+VPIVK +G+ DI + N LA NT++L YA ID R+Q L + +K +AK
Sbjct: 810 TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAK 866
Score = 78 (32.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 595 NKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFE 654
N+ S+G+L ++ VI VR ++++ K+W +R I IEDPF
Sbjct: 384 NRVSLGQLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKR------RIAIEDPFS 437
Query: 655 VTHDLGRVVDKFSI-KVLREEFERAA 679
V ++ R ++ + + + E F RAA
Sbjct: 438 VKRNVARSLNSQLVYEYVVERF-RAA 462
Score = 44 (20.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 328 KNDTHERNDKKHRNSRD--KEIRSDNRGKRLLSQRMRN-LKWQIECRADIGRLNAPFLAI 384
KN E N K +D K+ +DN+ + + ++ L + R +G+L L
Sbjct: 339 KNSIAEENKAKADQPKDDTKKTETDNQSNAMKEKHGKSPLALETPNRVSLGQLWLELLKF 398
Query: 385 Y 385
Y
Sbjct: 399 Y 399
>CGD|CAL0005626 [details] [associations]
symbol:orf19.429 species:5476 "Candida albicans" [GO:0031125
"rRNA 3'-end processing" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IEA]
[GO:0071050 "snoRNA polyadenylation" evidence=IEA] [GO:0071035
"nuclear polyadenylation-dependent rRNA catabolic process"
evidence=IEA] [GO:0071039 "nuclear polyadenylation-dependent CUT
catabolic process" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=IEA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IEA]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IEA] [GO:0071037 "nuclear
polyadenylation-dependent snRNA catabolic process" evidence=IEA]
[GO:0071040 "nuclear polyadenylation-dependent antisense transcript
catabolic process" evidence=IEA] [GO:0007000 "nucleolus
organization" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end
processing" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0051575
"5'-deoxyribose-5-phosphate lyase activity" evidence=IEA]
[GO:0031499 "TRAMP complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 CGD:CAL0005626
Pfam:PF03828 eggNOG:COG5260 InterPro:IPR002058 KO:K03514
GO:GO:0016779 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715864.1 RefSeq:XP_715914.1 ProteinModelPortal:Q5A2B2
STRING:Q5A2B2 GeneID:3642450 GeneID:3642482 KEGG:cal:CaO19.429
KEGG:cal:CaO19.8059 Uniprot:Q5A2B2
Length = 603
Score = 211 (79.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 42/142 (29%), Positives = 76/142 (53%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNL-QNVQALT 471
WP +++GSCA + SDID+ + + L +L+ L++ L +NV+ +
Sbjct: 205 WPGTETHVFGSCATDLYLPGSDIDMVVVSETGDYENRSRLYQLSTFLRTKKLAKNVEVIA 264
Query: 472 RARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGV 531
A+VPI+K +DPV+ + D+ + K +R + L++L ++K + +SR +
Sbjct: 265 SAKVPIIKFVDPVSELHIDVSFERTNGLDAAKRIRRWLISTPGLRELVLVIKQFLRSRRL 324
Query: 532 NVTYQGTLSSYAYVLMCIHFLQ 553
N + G L YA ++MC HFL+
Sbjct: 325 NNVHVGGLGGYATIIMCYHFLR 346
Score = 66 (28.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 25/110 (22%), Positives = 54/110 (49%)
Query: 577 IECAYFDQVD-KLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKD 635
I C +F ++ KL +++G L+ FF + Y + ++S+ + + EK
Sbjct: 339 IMCYHFLRLHPKLSTSSMDALDNLGVLLIEFFELYGRNFSYDNLILSLDRDTEEPRYEKK 398
Query: 636 WTRRIGND-RHL--ICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIM 682
I N R+ I I+DP + T+++ R ++++ L++ F A +++
Sbjct: 399 GNHPILNTARNTFSIVIQDPADTTNNITR--SSYNLRDLKKAFGGAYQLL 446
Score = 49 (22.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 313 EDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDN 351
E+L D L+ D E ND+ + D + S K++ N
Sbjct: 63 EELTDDLVLIDSEEESNDSSDGFDDINSESEKKQVLVGN 101
>UNIPROTKB|F1MSM5 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0002134 "UTP binding" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] Pfam:PF03828 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0000287
GO:GO:0006378 GO:GO:0030145 GO:GO:0071044 GO:GO:0004652
InterPro:IPR002058 GeneTree:ENSGT00550000074490 GO:GO:0002134
CTD:55149 OMA:VRCWARA EMBL:DAAA02035653 EMBL:DAAA02035652
IPI:IPI00717138 RefSeq:XP_002692192.2 RefSeq:XP_588743.5
UniGene:Bt.64250 PRIDE:F1MSM5 Ensembl:ENSBTAT00000005760
GeneID:511412 KEGG:bta:511412 Uniprot:F1MSM5
Length = 583
Score = 220 (82.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 62/225 (27%), Positives = 116/225 (51%)
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
VQ + AR P+V+ +G CD+ NN +A+ +++LL Y +D R++ L F V+ WA
Sbjct: 304 VQRILNARCPLVRFSHQASGFQCDLTTNNRIALKSSELLYMYGALDSRVRALVFSVRCWA 363
Query: 527 KSRGVNVTYQGT-LSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDD--IE---CA 580
++ + + G +++++ +M I FLQ+R P ILP L + KT + D IE C
Sbjct: 364 RAHSLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTLDYL-KTLADAEDKCIIEGHNCT 422
Query: 581 YFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRI 640
+ ++++ SRN E++ L+ FF Y+ + N I++R G +K E
Sbjct: 423 FVGDLNRIKP--SRNTETLELLLKEFFEYFG-NFAFNKNSINIRQGREQNKPES------ 473
Query: 641 GNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHD 685
+ H I++PFE + ++ + V + ++ + +A I+ +
Sbjct: 474 -SPLH---IQNPFETSLNVSKNVSQSQLQKFVDLARESAWILHQE 514
Score = 62 (26.9 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQALTR 472
+PD + +GS NSFG D+D+ L ++ EI K + L ++NV +
Sbjct: 224 FPDCAVRPFGSSVNSFGKLGCDLDMFLDLD--EIGKFTAQKTSGNFLMEFQVKNVPS--- 278
Query: 473 ARVPIVKLMDPV 484
RV K++ +
Sbjct: 279 ERVATQKILSVI 290
>UNIPROTKB|Q9NVV4 [details] [associations]
symbol:MTPAP "Poly(A) RNA polymerase, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=IMP] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0002134 "UTP binding" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Pfam:PF03828
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0000287 GO:GO:0008219 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 EMBL:CH471072 GO:GO:0030145
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0002134 EMBL:AL161651 EMBL:AB194709 EMBL:AY364242
EMBL:AK001348 EMBL:AK022188 EMBL:AL122121 EMBL:AL353796
EMBL:BC061703 IPI:IPI00153051 IPI:IPI00470416 RefSeq:NP_060579.3
UniGene:Hs.173946 PDB:3PQ1 PDBsum:3PQ1 ProteinModelPortal:Q9NVV4
SMR:Q9NVV4 IntAct:Q9NVV4 STRING:Q9NVV4 PhosphoSite:Q9NVV4
DMDM:74753002 PaxDb:Q9NVV4 PRIDE:Q9NVV4 Ensembl:ENST00000263063
Ensembl:ENST00000358107 GeneID:55149 KEGG:hsa:55149 UCSC:uc001iva.4
UCSC:uc001ivb.4 CTD:55149 GeneCards:GC10M030598 HGNC:HGNC:25532
HPA:HPA038620 MIM:613669 MIM:613672 neXtProt:NX_Q9NVV4
PharmGKB:PA164723192 HOGENOM:HOG000115438 HOVERGEN:HBG082104
OMA:VRCWARA OrthoDB:EOG45TCN5 PhylomeDB:Q9NVV4
EvolutionaryTrace:Q9NVV4 GenomeRNAi:55149 NextBio:58876
ArrayExpress:Q9NVV4 Bgee:Q9NVV4 Genevestigator:Q9NVV4
GermOnline:ENSG00000107951 Uniprot:Q9NVV4
Length = 582
Score = 225 (84.3 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 64/238 (26%), Positives = 120/238 (50%)
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
VQ + AR P+V+ +G CD+ NN +A+ +++LL Y +D R++ L F V+ WA
Sbjct: 302 VQKILNARCPLVRFSHQASGFQCDLTTNNRIALTSSELLYIYGALDSRVRALVFSVRCWA 361
Query: 527 KSRGVNVTYQGT-LSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDD--IE---CA 580
++ + + G +++++ +M I FLQ+R P ILP L + KT + D IE C
Sbjct: 362 RAHSLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTLDSL-KTLADAEDKCVIEGNNCT 420
Query: 581 YFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRI 640
+ + ++ S+N E++ L+ FF Y+ + N I++R G +Q K
Sbjct: 421 FVRDLSRIKP--SQNTETLELLLKEFFEYFG-NFAFDKNSINIRQGR---EQNKP----- 469
Query: 641 GNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPN--PCVKLFEPY 696
D + I++PFE + ++ + V + ++ + +A I+Q + P + P+
Sbjct: 470 --DSSPLYIQNPFETSLNISKNVSQSQLQKFVDLARESAWILQQEDTDRPSISSNRPW 525
Score = 53 (23.7 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQALTR 472
+PD + +GS N+FG D+D+ L ++++ N S + + L ++NV +
Sbjct: 222 FPDCIVRPFGSSVNTFGKLGCDLDMFLDLDETR-NLSAHKIS-GNFLMEFQVKNVPSERI 279
Query: 473 ARVPIVKLM 481
A I+ ++
Sbjct: 280 ATQKILSVL 288
>UNIPROTKB|A9JTS5 [details] [associations]
symbol:tut1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS]
[GO:0050265 "RNA uridylyltransferase activity" evidence=ISS]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00076 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0005524 GO:GO:0005730 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378
GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0050265 GO:GO:0016180 HOGENOM:HOG000115998
HOVERGEN:HBG079670 EMBL:BC155457 UniGene:Str.66101
ProteinModelPortal:A9JTS5 STRING:A9JTS5 Xenbase:XB-GENE-491663
Uniprot:A9JTS5
Length = 843
Score = 219 (82.2 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 75/277 (27%), Positives = 140/277 (50%)
Query: 429 GVSKSDID--VCLAINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPV 484
G SK+D D V ++ ++ E+L + +L+ + VQ++ AR P++
Sbjct: 278 GNSKNDEDEDVTPGLSLKGLSSEEILEVVGKVLRHCVPGVHGVQSVPTARRPVIHFQHKT 337
Query: 485 TGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK-SRGVNVTYQG--TLSS 541
+G+ D+ +NN LA+ N+ LR + +D R+ QL + V++WA+ ++ + G L++
Sbjct: 338 SGLRGDVTLNNRLALRNSSFLRLCSDLDARVPQLVYTVRYWARVNQLAGNPFGGGPLLNN 397
Query: 542 YAYVLMCIHFLQQRRPAILPCLQGM-EKTYSVT---VDDIECAYFDQVDKLHGFGSRNKE 597
YA L+ FLQ R P +LP L + E+T + +D +C++ ++ G N++
Sbjct: 398 YALTLLVFFFLQTRNPPVLPTLVHLREETANEVPQVIDGWDCSFPSDPAQVKESG--NQQ 455
Query: 598 SIGRLVWAFFNYWAYGHDYASNVISVRTGSTI----SKQEKDWTR--RIGNDRHLICIED 651
S+ L+ FF+++A D ++ G TI S W+ R+G + I+D
Sbjct: 456 SLSSLLSEFFSFYA-SLDLHLLILCPCNGLTIPLPFSSPPPAWSEGFRLGP----LNIQD 510
Query: 652 PFEVTHDL-GRVVDKFSIKVLREEFERAAEIMQHDPN 687
PFE++H++ G V + + + + AA I + PN
Sbjct: 511 PFELSHNVCGNVSSRAARRFI-SHCAAAARICR-TPN 545
Score = 64 (27.6 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSE 450
+P +L +GS N F +S D+D+ L + D E E
Sbjct: 205 FPGCQLLPFGSSVNGFEISGCDLDLYLDLGDDEAENVE 242
Score = 44 (20.5 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 300 GYSQGGDDMD---DFGEDLVDSLLPDDESELKNDTHERND 336
G+ G D+D D G+D +++ E E++N D
Sbjct: 219 GFEISGCDLDLYLDLGDDEAENVEGKAEKEIQNREESSTD 258
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 248 (92.4 bits), Expect = 6.9e-16, Sum P(3) = 6.9e-16
Identities = 75/232 (32%), Positives = 117/232 (50%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEV--LLKLADILQSDNLQN-VQALTR 472
A + LYGS + ++ SD+D IN S K + L ++ L L ++ T
Sbjct: 2215 ASINLYGSFLSGLSLNDSDLD----INFSSTQKEDTTHLKQVYKYLNRSQLYKLIEKRTD 2270
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VPI++ + +G+ D+C N++++ N+ LL +Y ID R + L +VK WA S+ +N
Sbjct: 2271 AKVPIIRFKEISSGVHFDMCFNSMMSYHNSLLLGEYCSIDNRSRDLVLLVKWWAVSKDLN 2330
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG-----MEKTYSVT-----------VDD 576
+ T SS+ V M IHFLQ P ILP LQ +EK YS V++
Sbjct: 2331 NAAEKTFSSFCLVNMVIHFLQSLNPPILPNLQTTSNQLLEK-YSTNRNLIKLKSQTIVEN 2389
Query: 577 IECAYFDQVDKLHGFG-SRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGS 627
Y+D + F RNK +I +L + FF Y++ +Y N+IS+ S
Sbjct: 2390 YLVKYYDW-SSFNKFEPKRNKLTIAQLFYQFFYYYST-FNYKENIISISHSS 2439
Score = 50 (22.7 bits), Expect = 6.9e-16, Sum P(3) = 6.9e-16
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 301 YSQGGDDMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDN 351
+S DD DD ++ D +D E++ H+ +D+ +R + + DN
Sbjct: 2021 HSDSEDDYDDSEDEEEDE--DEDNEEIQE--HDEDDESNRIKKINQEGEDN 2067
Score = 42 (19.8 bits), Expect = 6.9e-16, Sum P(3) = 6.9e-16
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 139 RFGSFQVQPDSLLNLNHLENLKYN 162
RF S Q D LL+ +++++L YN
Sbjct: 1810 RFPSNQFYKDRLLDGDNVKSLVYN 1833
Score = 40 (19.1 bits), Expect = 7.2e-15, Sum P(3) = 7.2e-15
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 312 GEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDN 351
GED D L DD+ + ++ E + D+E+ N
Sbjct: 2064 GEDN-DDLEDDDDDDNEHGDEEYHSISEEYDEDEEVFDTN 2102
Score = 37 (18.1 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 322 DDESELKNDTHERNDKKHRNSRDKEIRSDNRGKRL 356
D E + + E D+ N +E D+ R+
Sbjct: 2023 DSEDDYDDSEDEEEDEDEDNEEIQEHDEDDESNRI 2057
>MGI|MGI:1914690 [details] [associations]
symbol:Mtpap "mitochondrial poly(A) polymerase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=ISO]
[GO:0002134 "UTP binding" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0030145 "manganese ion
binding" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO]
MGI:MGI:1914690 Pfam:PF03828 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0000287
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0030145
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 CTD:55149
HOGENOM:HOG000115438 HOVERGEN:HBG082104 OMA:VRCWARA
OrthoDB:EOG45TCN5 EMBL:AK011546 EMBL:AK076565 EMBL:AK135537
EMBL:BC057643 IPI:IPI00459344 RefSeq:NP_080433.1 UniGene:Mm.49826
ProteinModelPortal:Q9D0D3 SMR:Q9D0D3 PhosphoSite:Q9D0D3
PaxDb:Q9D0D3 PRIDE:Q9D0D3 Ensembl:ENSMUST00000025077 GeneID:67440
KEGG:mmu:67440 UCSC:uc008dyi.1 InParanoid:Q9D0D3 NextBio:324570
Bgee:Q9D0D3 CleanEx:MM_PAPD1 Genevestigator:Q9D0D3
GermOnline:ENSMUSG00000024234 Uniprot:Q9D0D3
Length = 585
Score = 226 (84.6 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 62/227 (27%), Positives = 114/227 (50%)
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
VQ + AR P+V+ +G CD+ NN +A+ +++LL Y +D R++ L F V+ WA
Sbjct: 305 VQKILNARCPLVRFSHQGSGFQCDLTANNSIALKSSELLYIYGSLDSRVRALVFSVRCWA 364
Query: 527 KSRGVNVTYQGT-LSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT----VDDIECAY 581
++ + + G +++++ +M I FLQ+R P ILP L ++ ++ C +
Sbjct: 365 RAHSLTSSIPGAWITNFSLTVMVIFFLQRRSPPILPTLDSLKSIADAEDRCILEGNNCTF 424
Query: 582 FDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIG 641
V+K+ G N E++ L+ FF Y+ + N I++R G +Q K
Sbjct: 425 VQDVNKIQPSG--NTETLELLIKEFFEYFG-NFAFNKNSINIRQGR---EQNKP------ 472
Query: 642 NDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIM-QHDPN 687
D + I++PFE + ++ + V + ++ E +A I+ Q D N
Sbjct: 473 -DSSPLYIQNPFETSLNISKNVSQSQLQKFVELARDSAWILEQEDKN 518
Score = 50 (22.7 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNV 467
+P + +GS N+FG D+D+ L ++ E K +V + ++NV
Sbjct: 225 FPSCVIRPFGSSVNTFGKLGCDLDMFLDLD--ETGKLDVHKNTGNFFMEFQVKNV 277
>RGD|1310900 [details] [associations]
symbol:Mtpap "mitochondrial poly(A) polymerase" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=IEA;ISO] [GO:0002134 "UTP binding" evidence=IEA;ISO]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005794 "Golgi apparatus" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006378 "mRNA polyadenylation"
evidence=IEA;ISO] [GO:0030145 "manganese ion binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
Pfam:PF03828 RGD:1310900 GO:GO:0005739 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0000287 GO:GO:0006378
GO:GO:0030145 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 OMA:VRCWARA
OrthoDB:EOG45TCN5 IPI:IPI00366610 Ensembl:ENSRNOT00000022462
UCSC:RGD:1310900 Uniprot:D3ZPN5
Length = 584
Score = 218 (81.8 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 58/224 (25%), Positives = 113/224 (50%)
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
VQ + AR P+V+ +G CD+ NN +A+ +++LL Y +D R++ L F V+ WA
Sbjct: 305 VQKILNARCPLVRFSHQGSGFQCDLTANNSIALKSSELLYIYGSLDSRVRALVFGVRCWA 364
Query: 527 KSRGVNVTYQGT-LSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVT----VDDIECAY 581
++ + + G +++++ +M I FLQ+R P ILP L ++ ++ C +
Sbjct: 365 RAHSLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTLDSLKSMADAEDRCILEGNNCTF 424
Query: 582 FDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIG 641
++K+ G N E++ L+ FF Y+ + N I++R G +Q K
Sbjct: 425 IQDINKIKPSG--NTETLELLLKEFFEYFG-NFAFNKNSINIRQGR---EQNKP------ 472
Query: 642 NDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHD 685
D + I++PFE + ++ + V + ++ E +A I++ +
Sbjct: 473 -DSSPLYIQNPFETSLNISKNVSQNQLQKFVELARDSAWILEQE 515
Score = 50 (22.7 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDS 444
+P ++ +GS N+FG D+D+ L ++++
Sbjct: 225 FPSCVVWPFGSSVNTFGKLGCDLDMFLDLDET 256
>DICTYBASE|DDB_G0271962 [details] [associations]
symbol:DDB_G0271962 species:44689 "Dictyostelium
discoideum" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909
dictyBase:DDB_G0271962 Pfam:PF03828 EMBL:AAFI02000007
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_645343.1
ProteinModelPortal:Q8T2J7 EnsemblProtists:DDB0168581 GeneID:8618231
KEGG:ddi:DDB_G0271962 InParanoid:Q8T2J7 OMA:SYSITNM Uniprot:Q8T2J7
Length = 466
Score = 220 (82.5 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 62/225 (27%), Positives = 113/225 (50%)
Query: 415 DARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLK----LADILQSDNLQNVQAL 470
+ ++ ++GS + + KSD+D+ ++ ++E+ K + K + IL+++ N++ +
Sbjct: 187 EIKVEIFGSSSTQLALKKSDVDIVMSF-ETELTKRNDITKWCYQFSSILRANGFYNIKPI 245
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
A+VPIVK DP T CDI + NT +++++ Q+ L L K+WA
Sbjct: 246 IHAKVPIVKFFDPKTEFHCDITLTKDSG--NTGVVKEFCQLLPILPVLIIFCKNWASVLN 303
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDDIECAYFDQVDKLHG 590
+N QGTLSSY+ M I LQ++ +LP + ++ S E Y VD
Sbjct: 304 INDASQGTLSSYSITNMVIFVLQKK--GLLPSYKDIQ---SFKNSSKEVQYV--VD---- 352
Query: 591 FGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKD 635
N++ LV+ FF Y+ Y DY ++++++ + K+ D
Sbjct: 353 ----NRDIADLLVY-FFKYFGYIFDYRNSMVNILDYNNDKKEPMD 392
>UNIPROTKB|E2RCU9 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0006378 "mRNA polyadenylation" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0002134 "UTP binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] Pfam:PF03828 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0000287 GO:GO:0006378 GO:GO:0030145 GO:GO:0071044
GO:GO:0004652 InterPro:IPR002058 GeneTree:ENSGT00550000074490
GO:GO:0002134 CTD:55149 OMA:VRCWARA EMBL:AAEX03001227
RefSeq:XP_535150.2 Ensembl:ENSCAFT00000006387 GeneID:477963
KEGG:cfa:477963 Uniprot:E2RCU9
Length = 584
Score = 217 (81.4 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 63/232 (27%), Positives = 120/232 (51%)
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
VQ + AR P+V+ +G CD+ NN +A+ +++LL Y +D R++ + F ++ WA
Sbjct: 304 VQKILNARCPLVRFSHQASGFQCDLTTNNRIALKSSELLYIYGALDSRVRAMVFSIRCWA 363
Query: 527 KSRGVNVTYQGT-LSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYSVTVDD--IE---CA 580
++ + + G+ +++++ +M I FLQ+R P ILP L + KT + D IE C
Sbjct: 364 RAHSLTSSIPGSWITNFSLTMMVIFFLQRRSPPILPTLDYL-KTLADAEDKCIIEGHNCT 422
Query: 581 YFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRI 640
+ ++++ G N E++ L+ FF Y+ + N I++R G +K E
Sbjct: 423 FIRDLNRIKPSG--NTETLESLLKEFFEYFG-NFAFNKNSINIRQGREQNKPES------ 473
Query: 641 GNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIM-QHD---PNP 688
+ H I++PFE + ++ + V + ++ + +A I+ Q D P+P
Sbjct: 474 -SPLH---IQNPFETSLNISKNVSQSQLQKFVDLARESAWILSQEDKDRPSP 521
Score = 49 (22.3 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 415 DARLYLYGSCANSFGVSKSDIDVCLAINDSEINK 448
D + +GS NSFG D+D+ L ++ EI K
Sbjct: 226 DCTVRPFGSSVNSFGKLGCDLDMFLDLD--EIGK 257
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 244 (91.0 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 75/232 (32%), Positives = 117/232 (50%)
Query: 416 ARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEV--LLKLADILQSDNLQN-VQALTR 472
A + LYGS + ++ SD+D IN S K + L ++ L L ++
Sbjct: 2006 ASINLYGSFLSGLSLNDSDLD----INFSSTQKEDTTHLKQVYKYLNRSQLYKLIEKRIS 2061
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A+VPI++ + +GI D+C +++++ N+ LL +Y ID R + LA +VK WA S+ +N
Sbjct: 2062 AKVPIIRFKEISSGIHFDMCFHSMMSYHNSLLLGEYCSIDKRCRDLALLVKWWAVSKDLN 2121
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQG-----MEKTYSVT-----------VDD 576
+ T SS+ V M IHFLQ P ILP LQ +EK YS V++
Sbjct: 2122 NAAEKTFSSFCLVNMVIHFLQSLNPPILPNLQTTSNQLLEK-YSTDRNLIKLKSQTIVEN 2180
Query: 577 IECAYFDQVDKLHGFG-SRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGS 627
Y+D + F RNK +I +L + FF Y++ +Y N+IS+ S
Sbjct: 2181 YLVKYYDW-SSFNKFEPKRNKLTIAQLFYQFFYYYST-FNYKENIISISHSS 2230
Score = 44 (20.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 219 GSGNSRRGFEHNVDMINRFTSSA 241
GSG+ R F+ N+ +++ T S+
Sbjct: 1521 GSGSVRSNFKANIVLVDESTQSS 1543
Score = 42 (19.8 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 139 RFGSFQVQPDSLLNLNHLENLKYN 162
RF S Q D LL+ +++++L YN
Sbjct: 1611 RFPSNQFYKDRLLDGDNVKSLVYN 1634
Score = 39 (18.8 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 302 SQGGDDMDDFGEDLVDSL-LPDDESELKNDTHERND 336
+Q G+D DD +D + + DD+ E + + + N+
Sbjct: 1861 NQEGEDNDDLDDDDDEYYSISDDDDEDETVSPDSNN 1896
Score = 39 (18.8 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 306 DDMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDN 351
D D++ D D +DE + H+ +D+ +R + + DN
Sbjct: 1824 DSEDEY--DGKDEEEDEDEDNEEIQEHDEDDESNRIKKINQEGEDN 1867
Score = 37 (18.1 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 317 DSLLPDDESELKNDTHERNDKKHRNSRDKE 346
DSL P+ E +D+ + D K + E
Sbjct: 1811 DSLNPNGLIEFHSDSEDEYDGKDEEEDEDE 1840
Score = 37 (18.1 bits), Expect = 6.1e-14, Sum P(3) = 6.1e-14
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 238 TSSAVEGGNGVGLTRQLDRPGPPSGSNLHSVS 269
+S EG N + P PPS +N + +S
Sbjct: 3 SSLETEGENIPNSSTSPPPPPPPSSNNNNPIS 34
>UNIPROTKB|F1NJM3 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00400000022055 EMBL:AADN02007996 EMBL:AADN02007997
EMBL:AADN02007998 EMBL:AADN02007999 EMBL:AADN02008000
EMBL:AADN02008001 EMBL:AADN02008002 IPI:IPI00571796
Ensembl:ENSGALT00000021321 ArrayExpress:F1NJM3 Uniprot:F1NJM3
Length = 370
Score = 162 (62.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ---NVQA 469
WP A + ++GS + + SDID+ + + + + L L L+ N+ +++
Sbjct: 26 WPTADVQIFGSFSTGLYLPTSDIDLVVF---GKWERPPLQL-LEQALRKHNVAEPYSIKV 81
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
L +A VPI+KL D T + DI N V + +++Y + L L ++K + R
Sbjct: 82 LDKATVPIIKLTDQETEVKVDISFNVETGVKAARFIKEYMKKYTLLPYLILVLKQFLLQR 141
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQ 553
+N + G +SSY+ +LM I FLQ
Sbjct: 142 DLNEVFTGGISSYSLILMAISFLQ 165
Score = 99 (39.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 25/101 (24%), Positives = 48/101 (47%)
Query: 594 RNKESIGRLVWAFFNYWAYGHDYASNVISVRTGST-ISKQEKDWTRRIGNDRHLICIEDP 652
R E++G L+ FF + +Y I ++ G I+K+E G ++CIEDP
Sbjct: 174 RADENLGMLLIEFFELYGRNFNYLKTGIRIKNGGAYIAKEEIMKVMTNGYRPSMLCIEDP 233
Query: 653 FEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+D+GR + +++ F+ A ++ H +P + +
Sbjct: 234 LLPGNDVGR--SSYGAMQVKQVFDYAYIVLSHAVSPLARSY 272
>UNIPROTKB|E1BX86 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00400000022055 OMA:DNRIKIK EMBL:AADN02007996
EMBL:AADN02007997 EMBL:AADN02007998 EMBL:AADN02007999
EMBL:AADN02008000 EMBL:AADN02008001 EMBL:AADN02008002
IPI:IPI00813219 Ensembl:ENSGALT00000021322 ArrayExpress:E1BX86
Uniprot:E1BX86
Length = 423
Score = 162 (62.1 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ---NVQA 469
WP A + ++GS + + SDID+ + + + + L L L+ N+ +++
Sbjct: 26 WPTADVQIFGSFSTGLYLPTSDIDLVVF---GKWERPPLQL-LEQALRKHNVAEPYSIKV 81
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
L +A VPI+KL D T + DI N V + +++Y + L L ++K + R
Sbjct: 82 LDKATVPIIKLTDQETEVKVDISFNVETGVKAARFIKEYMKKYTLLPYLILVLKQFLLQR 141
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQ 553
+N + G +SSY+ +LM I FLQ
Sbjct: 142 DLNEVFTGGISSYSLILMAISFLQ 165
Score = 99 (39.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 25/101 (24%), Positives = 48/101 (47%)
Query: 594 RNKESIGRLVWAFFNYWAYGHDYASNVISVRTGST-ISKQEKDWTRRIGNDRHLICIEDP 652
R E++G L+ FF + +Y I ++ G I+K+E G ++CIEDP
Sbjct: 174 RADENLGMLLIEFFELYGRNFNYLKTGIRIKNGGAYIAKEEIMKVMTNGYRPSMLCIEDP 233
Query: 653 FEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+D+GR + +++ F+ A ++ H +P + +
Sbjct: 234 LLPGNDVGR--SSYGAMQVKQVFDYAYIVLSHAVSPLARSY 272
>UNIPROTKB|F1MG03 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9913 "Bos taurus" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355
SMART:SM00360 Pfam:PF03828 GO:GO:0005730 GO:GO:0000166
GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378
GO:GO:0003730 GO:GO:0005847 GO:GO:0006379 GO:GO:0004652
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0016180 IPI:IPI00705794 UniGene:Bt.21690 OMA:EQQGCAG
EMBL:DAAA02063485 Ensembl:ENSBTAT00000015724 Uniprot:F1MG03
Length = 871
Score = 213 (80.0 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 61/231 (26%), Positives = 121/231 (52%)
Query: 435 IDVCLAINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTGISCDIC 492
+++ A+ + +L + IL+ + VQ + AR P+VK +G+ DI
Sbjct: 324 VELAEALKGEKAEGGAMLELVGSILRGCVPGVYRVQTVPSARCPVVKFCHRPSGLHGDIS 383
Query: 493 INNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFL 552
++N LA+ N++ L +++D R++ L + ++ WA+ RG++ + L++YA L+ I+FL
Sbjct: 384 LSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP-LLNNYALTLLVIYFL 442
Query: 553 QQRRPAILPCLQGM-EKT-YSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFNYW 610
Q R P +LP + + +K V VD +C++ +L S NKE + L+ FF+
Sbjct: 443 QTRDPPVLPTVSQLTQKAGEQVEVDGWDCSFPRDASRLEP--STNKEPLSSLLAQFFSCV 500
Query: 611 AYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHL--ICIEDPFEVTHDL 659
+ D +++S+R G +S + L + ++DPF+++H++
Sbjct: 501 SCW-DLRGSLLSLREGQALSVAG-GLPSNLSEGLRLGPMNLQDPFDLSHNV 549
Score = 53 (23.7 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAIND 443
+P ++ +GS NSF V D+D+ L + D
Sbjct: 195 FPGCVVHPFGSSINSFDVHGCDLDLFLDLGD 225
>UNIPROTKB|Q1JPD6 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0016607 "nuclear
speck" evidence=ISS] [GO:0071044 "histone mRNA catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0050265 "RNA uridylyltransferase
activity" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 GO:GO:0005524
GO:GO:0005730 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0006379
eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GO:GO:0016180 EMBL:BT025417 IPI:IPI00705794 RefSeq:NP_001073791.1
UniGene:Bt.21690 ProteinModelPortal:Q1JPD6 SMR:Q1JPD6 STRING:Q1JPD6
GeneID:616339 KEGG:bta:616339 CTD:64852 HOVERGEN:HBG079670
InParanoid:Q1JPD6 OrthoDB:EOG480HWB NextBio:20900088 Uniprot:Q1JPD6
Length = 871
Score = 213 (80.0 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 61/231 (26%), Positives = 121/231 (52%)
Query: 435 IDVCLAINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTGISCDIC 492
+++ A+ + +L + IL+ + VQ + AR P+VK +G+ DI
Sbjct: 324 VELAEALKGEKAEGGAMLELVGSILRGCVPGVYRVQTVPSARCPVVKFCHRPSGLHGDIS 383
Query: 493 INNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFL 552
++N LA+ N++ L +++D R++ L + ++ WA+ RG++ + L++YA L+ I+FL
Sbjct: 384 LSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP-LLNNYALTLLVIYFL 442
Query: 553 QQRRPAILPCLQGM-EKT-YSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFNYW 610
Q R P +LP + + +K V VD +C++ +L S NKE + L+ FF+
Sbjct: 443 QTRDPPVLPTVSQLTQKAGEQVEVDGWDCSFPRDASRLEP--STNKEPLSSLLAQFFSCV 500
Query: 611 AYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHL--ICIEDPFEVTHDL 659
+ D +++S+R G +S + L + ++DPF+++H++
Sbjct: 501 SCW-DLRGSLLSLREGQALSVAG-GLPSNLSEGLRLGPMNLQDPFDLSHNV 549
Score = 53 (23.7 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAIND 443
+P ++ +GS NSF V D+D+ L + D
Sbjct: 195 FPGCVVHPFGSSINSFDVHGCDLDLFLDLGD 225
>RGD|1561043 [details] [associations]
symbol:Tut1 "terminal uridylyl transferase 1, U6 snRNA-specific"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISO;ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISO;ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISO;ISS] [GO:0006379 "mRNA cleavage" evidence=ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016180 "snRNA
processing" evidence=ISO;ISS] [GO:0016607 "nuclear speck"
evidence=ISO;ISS] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0050265 "RNA uridylyltransferase activity" evidence=ISO;ISS]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO;ISS]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355
SMART:SM00360 Pfam:PF03828 RGD:1561043 GO:GO:0005524 GO:GO:0005730
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB OMA:EQQGCAG EMBL:BC104695
IPI:IPI00371444 RefSeq:NP_001029073.1 UniGene:Rn.129389
ProteinModelPortal:Q3MHT4 SMR:Q3MHT4 IntAct:Q3MHT4 STRING:Q3MHT4
PhosphoSite:Q3MHT4 PRIDE:Q3MHT4 Ensembl:ENSRNOT00000027187
GeneID:499314 KEGG:rno:499314 UCSC:RGD:1561043 InParanoid:Q3MHT4
NextBio:702524 Genevestigator:Q3MHT4 GermOnline:ENSRNOG00000020047
Uniprot:Q3MHT4
Length = 866
Score = 208 (78.3 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 69/262 (26%), Positives = 130/262 (49%)
Query: 429 GVSKSDIDVCLAINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTG 486
G + ++++ A D + + VL + IL+ + VQ + AR P+VK +G
Sbjct: 319 GKHRKELELAEASKDEKEEATAVLELVGSILRGCVPGVYRVQTVPSARRPVVKFCHRPSG 378
Query: 487 ISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVL 546
+ DI ++N LA+ N++ L +++D R++ L + ++ WA+ G++ L++YA L
Sbjct: 379 LHGDISLSNRLALYNSRFLNLCSEMDSRVRPLVYTLRCWAQHNGLSGGGP-LLNNYALTL 437
Query: 547 MCIHFLQQRRPAILPCL----QGMEKTYSVTVDDIECAYFDQVDKLHGFGSRNKESIGRL 602
+ I+FLQ R P +LP + Q + V VD +C++ +L S N E + L
Sbjct: 438 LVIYFLQTRDPPVLPTVAQLTQRSGEGEQVEVDGWDCSFPKDASRLEP--STNVEPLSSL 495
Query: 603 VWAFFNYWAYGHDYASNVISVRTGSTISKQ---EKD-WTR-RIGNDRHLICIEDPFEVTH 657
+ FF+ + D + +++S+R G + D W R+G + ++DPF+++H
Sbjct: 496 LAQFFSCVSCW-DLSGSLLSLREGQALMVAGGLPSDLWEGLRLGP----MNLQDPFDLSH 550
Query: 658 DLGRVVDKFSIKVLREEFERAA 679
++ V K L+ AA
Sbjct: 551 NVAANVTSRVAKRLQSSCGAAA 572
Score = 58 (25.5 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE 445
+P ++ +GS NSF V D+D+ L + D E
Sbjct: 195 FPGCVVHPFGSSVNSFDVHGCDLDLFLDLGDME 227
>UNIPROTKB|F1RPX0 [details] [associations]
symbol:TUT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS50102 SMART:SM00355 SMART:SM00360 Pfam:PF03828
GO:GO:0005730 GO:GO:0000166 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0005847
GO:GO:0006379 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 OMA:EQQGCAG
EMBL:FP102338 EMBL:FP312617 Ensembl:ENSSSCT00000014279
Uniprot:F1RPX0
Length = 872
Score = 209 (78.6 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 63/236 (26%), Positives = 122/236 (51%)
Query: 435 IDVCLAINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTGISCDIC 492
+++ A+ + +L + IL+ + VQ + AR P+VK +G+ D+
Sbjct: 324 VELAQALKGEKAEGGAMLELVGSILRGCVPGVYRVQTVPSARRPVVKFCHRPSGLHGDVS 383
Query: 493 INNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFL 552
++N LA+ N++ L +++D R++ L + V+ WA+ RG++ + LS+YA L+ I+FL
Sbjct: 384 LSNRLALHNSRFLSLCSELDGRVRPLVYTVRCWAQGRGLSGSGP-LLSNYALTLLVIYFL 442
Query: 553 QQRRPAILPCLQGM-EKT---YSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFN 608
Q R P +LP + + +K V VD +C++ +L S NKE + L+ FF+
Sbjct: 443 QTRDPPVLPTVSQLTQKAGEGEQVEVDGWDCSFPRDASRLEP--STNKEPLSSLLAQFFS 500
Query: 609 YWAYGHDYASNVISVRTGSTI----SKQEKDWTR-RIGNDRHLICIEDPFEVTHDL 659
+ D +++S+R G + W R+G + ++DPF+++H++
Sbjct: 501 CISCW-DLRGSLLSLREGQALPVAGGLPSNLWEGLRLGP----MNLQDPFDLSHNV 551
Score = 57 (25.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE 445
+P ++ +GS NSF V D+D+ L + D E
Sbjct: 195 FPGCVVHPFGSSVNSFDVHGCDLDLFLDLGDLE 227
>UNIPROTKB|F6X6U9 [details] [associations]
symbol:MIR3654 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
Ensembl:ENSCAFT00000025061 ProteinModelPortal:F6X6U9 Uniprot:F6X6U9
Length = 818
Score = 208 (78.3 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 62/236 (26%), Positives = 123/236 (52%)
Query: 435 IDVCLAINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTGISCDIC 492
+++ A+ + + +L + IL+ + VQ + AR P+VK +G+ D+
Sbjct: 325 LELAEALKGEKPEGAAMLELVGSILRGCVPGVYRVQTVPSARRPVVKFCHRPSGLHGDVS 384
Query: 493 INNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFL 552
++N LA+ N++ L +++D R++ L + ++ WA+ RG++ + LS+YA L+ I+FL
Sbjct: 385 LSNRLALHNSRFLSLCSELDERVRPLVYTLRCWAQGRGLSGSGP-LLSNYALTLLVIYFL 443
Query: 553 QQRRPAILPCLQGM-EKT---YSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFN 608
Q R P +LP + + +K V VD +C++ +L S NKE + L+ FF+
Sbjct: 444 QTREPPVLPTVSQLTQKAGEGEQVEVDGWDCSFPRDASRLEP--STNKEPLSSLLAQFFS 501
Query: 609 YWAYGHDYASNVISVRTGSTI----SKQEKDWTR-RIGNDRHLICIEDPFEVTHDL 659
+ D +++S+R G + W R+G + ++DPF+++H++
Sbjct: 502 CVSCW-DLRGSLLSLREGQVLPVAGGLPSNRWEGLRLGP----MNLQDPFDLSHNV 552
Score = 56 (24.8 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE 445
+P ++ +GS NSF V D+D+ L + D E
Sbjct: 195 FPGCVVHPFGSSINSFDVHGCDLDLFLDLGDLE 227
>UNIPROTKB|E2R634 [details] [associations]
symbol:TUT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
GeneTree:ENSGT00550000074490 OMA:EQQGCAG EMBL:AAEX03011664
Ensembl:ENSCAFT00000025061 Uniprot:E2R634
Length = 873
Score = 208 (78.3 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 62/236 (26%), Positives = 123/236 (52%)
Query: 435 IDVCLAINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTGISCDIC 492
+++ A+ + + +L + IL+ + VQ + AR P+VK +G+ D+
Sbjct: 323 LELAEALKGEKPEGAAMLELVGSILRGCVPGVYRVQTVPSARRPVVKFCHRPSGLHGDVS 382
Query: 493 INNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFL 552
++N LA+ N++ L +++D R++ L + ++ WA+ RG++ + LS+YA L+ I+FL
Sbjct: 383 LSNRLALHNSRFLSLCSELDERVRPLVYTLRCWAQGRGLSGSGP-LLSNYALTLLVIYFL 441
Query: 553 QQRRPAILPCLQGM-EKT---YSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFN 608
Q R P +LP + + +K V VD +C++ +L S NKE + L+ FF+
Sbjct: 442 QTREPPVLPTVSQLTQKAGEGEQVEVDGWDCSFPRDASRLEP--STNKEPLSSLLAQFFS 499
Query: 609 YWAYGHDYASNVISVRTGSTI----SKQEKDWTR-RIGNDRHLICIEDPFEVTHDL 659
+ D +++S+R G + W R+G + ++DPF+++H++
Sbjct: 500 CVSCW-DLRGSLLSLREGQVLPVAGGLPSNRWEGLRLGP----MNLQDPFDLSHNV 550
Score = 56 (24.8 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE 445
+P ++ +GS NSF V D+D+ L + D E
Sbjct: 195 FPGCVVHPFGSSINSFDVHGCDLDLFLDLGDLE 227
>UNIPROTKB|E1BEH2 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042493 "response to drug" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:DNRIKIK
EMBL:DAAA02051298 IPI:IPI00706336 UniGene:Bt.6221
Ensembl:ENSBTAT00000004384 Uniprot:E1BEH2
Length = 541
Score = 158 (60.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ---NVQA 469
WP A + ++GS + + SDID+ + + + + L L L+ N+ +++
Sbjct: 26 WPTADVQIFGSFSTGLYLPTSDIDLVVF---GKWERPPLQL-LEQALRKHNVAEPGSIKV 81
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
L +A VPI+KL D T + DI N V + +++Y + L L ++K + R
Sbjct: 82 LDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKKYSLLPYLILVLKQFLLQR 141
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQ 553
+N + G +SSY+ +LM I FLQ
Sbjct: 142 DLNEVFTGGISSYSLILMAISFLQ 165
Score = 99 (39.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 25/101 (24%), Positives = 48/101 (47%)
Query: 594 RNKESIGRLVWAFFNYWAYGHDYASNVISVRTGST-ISKQEKDWTRRIGNDRHLICIEDP 652
R E++G L+ FF + +Y I ++ G I+K+E G ++CIEDP
Sbjct: 174 RADENLGMLLVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSMLCIEDP 233
Query: 653 FEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+D+GR + +++ F+ A ++ H +P + +
Sbjct: 234 LLPGNDVGR--SSYGAMQVKQVFDYAYIVLSHAVSPLARSY 272
>SGD|S000005475 [details] [associations]
symbol:PAP2 "Non-canonical poly(A) polymerase" species:4932
"Saccharomyces cerevisiae" [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process"
evidence=IGI;IDA;IMP] [GO:0071039 "nuclear
polyadenylation-dependent CUT catabolic process" evidence=IGI;IMP]
[GO:0051575 "5'-deoxyribose-5-phosphate lyase activity"
evidence=IDA;IMP] [GO:0006284 "base-excision repair"
evidence=IGI;IMP] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IGI;ISS;IMP;IDA] [GO:0043629 "ncRNA polyadenylation"
evidence=IGI;IMP;IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=IMP]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0071037
"nuclear polyadenylation-dependent snRNA catabolic process"
evidence=IMP] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IGI;IMP] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process"
evidence=IGI;IMP] [GO:0071050 "snoRNA polyadenylation"
evidence=IGI] [GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end
processing" evidence=IGI] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IGI]
[GO:0071051 "polyadenylation-dependent snoRNA 3'-end processing"
evidence=IGI] [GO:0071047 "polyadenylation-dependent mRNA catabolic
process" evidence=IMP] [GO:0071040 "nuclear
polyadenylation-dependent antisense transcript catabolic process"
evidence=IMP] [GO:0071044 "histone mRNA catabolic process"
evidence=IGI] InterPro:IPR002934 Pfam:PF01909 SGD:S000005475
Pfam:PF03828 GO:GO:0005730 EMBL:BK006948 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0006284 GO:GO:0006400
GO:GO:0031499 GO:GO:0071031 GO:GO:0071039 GO:GO:0071035
GO:GO:0071036 GO:GO:0071037 GO:GO:0071038 PDB:3NYB PDBsum:3NYB
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
KO:K03514 OrthoDB:EOG43BQXK EMBL:Z48149 GO:GO:0071042 GO:GO:0071051
GO:GO:0051575 GeneTree:ENSGT00400000022055 GO:GO:0034475
EMBL:U31355 EMBL:Z74857 EMBL:AY723865 PIR:S51882 RefSeq:NP_014526.1
ProteinModelPortal:P53632 SMR:P53632 DIP:DIP-4214N IntAct:P53632
MINT:MINT-500696 STRING:P53632 PaxDb:P53632 EnsemblFungi:YOL115W
GeneID:854034 KEGG:sce:YOL115W CYGD:YOL115w HOGENOM:HOG000246586
OMA:LHVFGSY EvolutionaryTrace:P53632 NextBio:975589
Genevestigator:P53632 GermOnline:YOL115W GO:GO:0071040
GO:GO:0071050 Uniprot:P53632
Length = 584
Score = 189 (71.6 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 46/150 (30%), Positives = 79/150 (52%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEV-LLKLADILQSDNLQN-VQAL 470
WPDA L+++GS + + SDID C+ ++ +S L LA L+ NL V+ +
Sbjct: 215 WPDADLHVFGSYSTDLYLPGSDID-CVVTSELGGKESRNNLYSLASHLKKKNLATEVEVV 273
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+ARVPI+K ++P +GI D+ + KL+R++ L++L IVK + +R
Sbjct: 274 AKARVPIIKFVEPHSGIHIDVSFERTNGIEAAKLIREWLDDTPGLRELVLIVKQFLHARR 333
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQQRRPAIL 560
+N + G L ++ + + FL P I+
Sbjct: 334 LNNVHTGGLGGFSIICLVFSFLHMH-PRII 362
Score = 63 (27.2 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 22/99 (22%), Positives = 47/99 (47%)
Query: 596 KESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWT--RRIGNDRHLICIEDPF 653
K+++G L+ FF + Y + G + + W+ + I N L I+DP
Sbjct: 369 KDNLGVLLIEFFELYGKNFGYDDVALGSSDGYPVYFPKSTWSAIQPIKNPFSL-AIQDPG 427
Query: 654 EVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKL 692
+ ++++ R F+I+ +++ F A +++ N C +L
Sbjct: 428 DESNNISR--GSFNIRDIKKAFAGAFDLLT---NRCFEL 461
Score = 44 (20.5 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 12/51 (23%), Positives = 24/51 (47%)
Query: 299 PGYSQGGDDMD-DFGEDLVD-SLLPDDESELKNDTHERNDKKHRNSRDKEI 347
P + GD+ D +D + S +DE + + E+ + + + + KEI
Sbjct: 106 PSLAVHGDEKDLANNDDFISLSASSEDEQAEQEEEREKQELEIKKEKQKEI 156
>UNIPROTKB|D2HS90 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9646 "Ailuropoda melanoleuca" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0016180 "snRNA processing"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS] [GO:0050265
"RNA uridylyltransferase activity" evidence=ISS] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 GO:GO:0005524
GO:GO:0005730 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0005847
GO:GO:0006379 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GO:GO:0016180 EMBL:GL193267 ProteinModelPortal:D2HS90
HOGENOM:HOG000115998 Uniprot:D2HS90
Length = 869
Score = 202 (76.2 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 61/232 (26%), Positives = 121/232 (52%)
Query: 435 IDVCLAINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTGISCDIC 492
+++ A++ + +L + IL+ + VQ + AR P+VK +G+ D+
Sbjct: 323 LELAEALSGEKTEGVAMLELVGSILRGCVPGVYRVQTVPSARRPVVKFCHRPSGLHGDVS 382
Query: 493 INNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFL 552
++N LA+ N++ L +++D R++ L + ++ WA+ RG++ + LS+YA L+ I+FL
Sbjct: 383 LSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGRGLSGSGP-LLSNYALTLLVIYFL 441
Query: 553 QQRRPAILPCLQGM-EKT---YSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFN 608
Q R P +LP + + +K V VD +C++ L S NKE + L+ FF+
Sbjct: 442 QTRDPPVLPTVSQLTQKAGEGEQVEVDGWDCSFPRDASGLEP--STNKEPLSSLLAQFFS 499
Query: 609 YWAYGHDYASNVISVRTGSTISKQ-EKDWTRRIGNDRHLICIEDPFEVTHDL 659
+ D +++S+R G + + R G + ++DPF+++H++
Sbjct: 500 CVSCW-DLRGSLLSLREGQALPVAGDLPSNRWEGLRLGPMNLQDPFDLSHNV 550
Score = 56 (24.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE 445
+P ++ +GS NSF V D+D+ L + D E
Sbjct: 195 FPGCVVHPFGSSINSFDVHGCDLDLFLDLGDLE 227
>ZFIN|ZDB-GENE-041021-1 [details] [associations]
symbol:papd7 "PAP associated domain containing 7"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 ZFIN:ZDB-GENE-041021-1 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 EMBL:BX511155
IPI:IPI00490581 Ensembl:ENSDART00000089425 Bgee:F1Q7F1
Uniprot:F1Q7F1
Length = 762
Score = 164 (62.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + + SDID+ + + + E L+ + + +++ L
Sbjct: 266 WPTADVQIFGSFSTGLFLPTSDIDLVVFGKWEKPPLQQLEQALRKHSVAEP---YSIKVL 322
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N + +++Y + L L F++K + R
Sbjct: 323 DKATVPIIKLTDQETEVKVDISFNVETGIKAASFIKEYVKKYTVLPYLIFVLKQFLLQRD 382
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ 553
+N + G +SSY+ +LM I FLQ
Sbjct: 383 LNEVFTGGISSYSLILMVISFLQ 405
Score = 93 (37.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 28/111 (25%), Positives = 52/111 (46%)
Query: 587 KLHG-FGSRNKE-SIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDR 644
+LH +RN ++G L+ FF + +Y I ++ G +E D + + N
Sbjct: 405 QLHPRIDTRNPNMNLGILLIEFFELYGRHFNYLKTGIRIKNGGAYMAKE-DIMKAMSNGY 463
Query: 645 H--LICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
++CIEDP +D+GR + ++E F+ A I+ H +P + +
Sbjct: 464 RPSMLCIEDPLLPGNDVGR--SSYGAMQVKEAFDYAYIILSHAVSPLARSY 512
>MGI|MGI:1917294 [details] [associations]
symbol:Tut1 "terminal uridylyl transferase 1, U6
snRNA-specific" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
MGI:MGI:1917294 Pfam:PF03828 GO:GO:0005524 GO:GO:0005730
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB EMBL:AK138418 EMBL:BC023900
EMBL:BC025499 IPI:IPI00153749 IPI:IPI00798562 RefSeq:NP_932110.1
UniGene:Mm.165979 ProteinModelPortal:Q8R3F9 SMR:Q8R3F9
STRING:Q8R3F9 PhosphoSite:Q8R3F9 PaxDb:Q8R3F9 PRIDE:Q8R3F9
Ensembl:ENSMUST00000096239 GeneID:70044 KEGG:mmu:70044
UCSC:uc008gog.1 UCSC:uc008goh.1 InParanoid:Q8R3F9 OMA:EQQGCAG
NextBio:330881 Bgee:Q8R3F9 Genevestigator:Q8R3F9
GermOnline:ENSMUSG00000071645 Uniprot:Q8R3F9
Length = 869
Score = 197 (74.4 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 63/231 (27%), Positives = 119/231 (51%)
Query: 440 AINDSEINKSEVLLKLADILQS--DNLQNVQALTRARVPIVKLMDPVTGISCDICINNLL 497
A D + + VL + IL+ + VQ + AR P+VK +G+ D+ ++N L
Sbjct: 332 ASKDEKEEAAAVLELVGSILRGCVPGVYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRL 391
Query: 498 AVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQQRRP 557
A+ N++ L +++D R++ L + ++ WA+ G++ L++YA L+ I+FLQ R P
Sbjct: 392 ALYNSRFLNLCSEMDGRVRPLVYTLRCWAQHNGLSGGGP-LLNNYALTLLVIYFLQTRDP 450
Query: 558 AILPCL----QGMEKTYSVTVDDIECAYFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYG 613
+LP + Q + V VD +C++ +L S N E + L+ FF+ +
Sbjct: 451 PVLPTVAQLTQRAGEGEQVEVDGWDCSFPKDASRLEP--STNVEPLSSLLAQFFSCVSC- 507
Query: 614 HDYASNVISVRTGSTISKQE---KD-WTR-RIGNDRHLICIEDPFEVTHDL 659
D + +++S+R G + E D W R+G + ++DPF+++H++
Sbjct: 508 LDLSGSLLSLREGRPLMVAEGLPSDLWEGLRLGP----MNLQDPFDLSHNV 554
Score = 57 (25.1 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE 445
+P ++ +GS NSF V D+D+ L + D E
Sbjct: 195 FPGCVVHPFGSTVNSFDVHGCDLDLFLDMGDME 227
>TAIR|locus:2063937 [details] [associations]
symbol:HESO1 "HEN1 suppressor 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016779
"nucleotidyltransferase activity" evidence=IDA] [GO:0071076 "RNA 3'
uridylation" evidence=IMP] GO:GO:0005634 GO:GO:0005737
EMBL:CP002685 GO:GO:0071076 GO:GO:0016779 UniGene:At.21484
UniGene:At.37137 EMBL:BT015881 EMBL:BT020198 IPI:IPI00527276
RefSeq:NP_181504.2 ProteinModelPortal:Q5XET5 SMR:Q5XET5
IntAct:Q5XET5 PRIDE:Q5XET5 EnsemblPlants:AT2G39740.1 GeneID:818559
KEGG:ath:AT2G39740 TAIR:At2g39740 InParanoid:Q5XET5 OMA:VEDPFEQ
PhylomeDB:Q5XET5 ProtClustDB:CLSN2681710 Genevestigator:Q5XET5
Uniprot:Q5XET5
Length = 511
Score = 201 (75.8 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 76/279 (27%), Positives = 132/279 (47%)
Query: 421 YGSCANSFGVSKSDIDVCLAI-NDSEI------NKSEVLLKLADILQSDNL-QNVQALTR 472
+GS ++ D+D+ + + + S I K +L L L++ L +Q +
Sbjct: 53 FGSFVSNLFTRWGDLDISVDLFSGSSILFTGKKQKQTLLGHLLRALRASGLWYKLQFVIH 112
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
ARVPI+K++ ISCDI I+NL ++ ++ L ++ID R + L +VK WAK+ +N
Sbjct: 113 ARVPILKVVSGHQRISCDISIDNLDGLLKSRFLFWISEIDGRFRDLVLLVKEWAKAHNIN 172
Query: 533 VTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQ------------GMEKTYSVTVDDIECA 580
+ GT +SY+ L+ I Q PAILP L+ G+ KT ++ + A
Sbjct: 173 DSKTGTFNSYSLSLLVIFHFQTCVPAILPPLRVIYPKSAVDDLTGVRKTAEESIAQVTAA 232
Query: 581 YFDQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNV-ISVRTG--STISKQEKDWT 637
+ K S N+ S+ L+ +FF ++ + A + TG TIS W
Sbjct: 233 NIARF-KSERAKSVNRSSLSELLVSFFAKFSDINVKAQEFGVCPFTGRWETISSNTT-WL 290
Query: 638 RRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEFE 676
+ + + +EDPFE + R V + ++ + + F+
Sbjct: 291 PKT----YSLFVEDPFEQPVNAARSVSRRNLDRIAQVFQ 325
>POMBASE|SPCC663.12 [details] [associations]
symbol:cid12 "poly(A) polymerase Cid12" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000077 "DNA damage checkpoint"
evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IGI] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IGI;IMP] [GO:0031134
"sister chromatid biorientation" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
[GO:0043631 "RNA polyadenylation" evidence=ISM] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051315 "attachment of spindle
microtubules to kinetochore involved in mitotic sister chromatid
segregation" evidence=IMP] PomBase:SPCC663.12 Pfam:PF03828
GO:GO:0005829 GO:GO:0005524 GO:GO:0000077 GO:GO:0007094
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0003723
GO:GO:0030702 GO:GO:0031048 GO:GO:0031134 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 PIR:T41543 RefSeq:NP_588273.1
ProteinModelPortal:O74518 STRING:O74518 EnsemblFungi:SPCC663.12.1
GeneID:2539423 KEGG:spo:SPCC663.12 KO:K11700 OrthoDB:EOG4B8NQ6
NextBio:20800587 GO:GO:0031380 GO:GO:0043631 Uniprot:O74518
Length = 336
Score = 141 (54.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 44/142 (30%), Positives = 68/142 (47%)
Query: 415 DARLYLYGSCANSFGVSKSDIDVCL-AINDSEINKSEVLLKLADILQSDNLQNVQALTRA 473
DA L +YGS +S SD+DV L + E+ K V + L L +D + A
Sbjct: 58 DAELQVYGSMYIGTTLSISDVDVSLKSPRVGELEKRRVTMVLRKYLDAD----ADFHSSA 113
Query: 474 RVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNV 533
RVP + L+D V+GI D+ N A +L + Y + +L ++KHW R +
Sbjct: 114 RVPRINLVD-VSGIGVDLTFGNDKACRTAELQKAYNEEHPIFGRLLMLLKHWLFERDLEN 172
Query: 534 TYQGTLSSYAYVLMCIHFLQQR 555
+ G ++S A M I +L+ R
Sbjct: 173 VHHGGIASCALSYMLIGWLEMR 194
Score = 101 (40.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 24/89 (26%), Positives = 42/89 (47%)
Query: 597 ESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRHLICIEDPFEVT 656
+ I L+ FF +W Y V+ TG + K +K W + +L+ IEDP +
Sbjct: 205 QPIRALLQKFFYFWGVEWTYELFVLRPLTGQIVPKLQKGWLNEV--QPNLLSIEDPIDRN 262
Query: 657 HDLGRVVDKFSIKVLREEFERAAEIMQHD 685
+D+G+ F I +++ F +A + D
Sbjct: 263 NDIGK--QSFQISMIKAAFVASANELLSD 289
>UNIPROTKB|F1NCH7 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:TYGLNYS
EMBL:AADN02038455 EMBL:AADN02038456 EMBL:AADN02038457
IPI:IPI00597559 Ensembl:ENSGALT00000006125 Uniprot:F1NCH7
Length = 501
Score = 160 (61.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 48/156 (30%), Positives = 76/156 (48%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVL--LKLADILQSDNL--QN-V 467
WP+A + ++GS + SDID+ + K E L L + L+ N+ +N V
Sbjct: 37 WPNADVQIFGSFKTGLYLPTSDIDLVV------FGKWETLPLWTLEEALRKHNVADENSV 90
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+ L +A VPI+KL D T + DI N V +L++D+ + L L ++K +
Sbjct: 91 KVLDKATVPIIKLTDSFTEVKVDISFNVQNGVKAAQLIKDFIKKYPVLPYLVLVLKQFLL 150
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
R +N + G + SY+ LM + FLQ R A P
Sbjct: 151 QRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACTP 186
Score = 87 (35.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 23/95 (24%), Positives = 45/95 (47%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E + G ++ IEDP + +D
Sbjct: 191 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSMLDGYRPSMLYIEDPLQPGND 250
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 251 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 283
>FB|FBgn0030049 [details] [associations]
symbol:Trf4-1 species:7227 "Drosophila melanogaster"
[GO:0003916 "DNA topoisomerase activity" evidence=ISS] [GO:0007062
"sister chromatid cohesion" evidence=NAS] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=NAS] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=IMP] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AE014298 GO:GO:0016853 GO:GO:0043630
GO:GO:0003887 GO:GO:0004652 InterPro:IPR002058 KO:K03514
GO:GO:0007062 GeneTree:ENSGT00400000022055 UniGene:Dm.18620
GeneID:31795 KEGG:dme:Dmel_CG11265 CTD:31795 FlyBase:FBgn0030049
GenomeRNAi:31795 NextBio:775336 EMBL:BT010282 RefSeq:NP_996381.1
RefSeq:NP_996382.2 SMR:Q7KVS9 EnsemblMetazoa:FBtr0071212
EnsemblMetazoa:FBtr0071213 EnsemblMetazoa:FBtr0331723
EnsemblMetazoa:FBtr0331724 EnsemblMetazoa:FBtr0331725
UCSC:CG11265-RC InParanoid:Q7KVS9 OMA:MKIGISI Uniprot:Q7KVS9
Length = 1001
Score = 167 (63.8 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 45/143 (31%), Positives = 74/143 (51%)
Query: 413 WPDARLYLYGSCANSFGVSKSDID-VCLAINDS-EINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID V L + + + E L I ++ V+ L
Sbjct: 307 WPQAVVEIFGSFRTGLFLPTSDIDLVVLGLWEKLPLRTLEFELVSRGIAEACT---VRVL 363
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N V + +L++ + + L++L ++K + R
Sbjct: 364 DKASVPIIKLTDRETQVKVDISFNMQSGVQSAELIKKFKRDYPVLEKLVLVLKQFLLLRD 423
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ 553
+N + G +SSY+ +LMCI FLQ
Sbjct: 424 LNEVFTGGISSYSLILMCISFLQ 446
Score = 81 (33.6 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 24/88 (27%), Positives = 43/88 (48%)
Query: 598 SIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDWTRRIGNDRH---LICIEDPFE 654
++G L+ FF + +Y IS++ G KD +R D H L+CIEDP
Sbjct: 458 NLGVLLLEFFELYGRRFNYMKIGISIKNGGRY--MPKDELQRDMVDGHRPSLLCIEDPLT 515
Query: 655 VTHDLGRVVDKFSIKVLREEFERAAEIM 682
+D+GR + + +++ F+ A ++
Sbjct: 516 PGNDIGR--SSYGVFQVQQAFKCAYRVL 541
Score = 50 (22.7 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 18/69 (26%), Positives = 30/69 (43%)
Query: 190 NSREHDLRLGKQHYGSTPPPGF-SNKARVGGSGNSRRGFEHNVDMINRFTSSAVEGGNGV 248
N++E L +Q +T G S+ + SGN+ +N+ + N T++ GN
Sbjct: 27 NAQEMGALLNQQLQQATTINGSTSSSSSSSNSGNNNNNNNNNI-INNTITNTTNNTGNNS 85
Query: 249 GLTRQLDRP 257
L RP
Sbjct: 86 SAKPYLSRP 94
>WB|WBGene00003499 [details] [associations]
symbol:mut-2 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0000335 "negative regulation
of transposition, DNA-mediated" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0009792 GO:GO:0048471 GO:GO:0016246
GO:GO:0045132 EMBL:FO081226 eggNOG:COG5260 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00550000074490 GO:GO:0000335 PIR:H87803
RefSeq:NP_491834.1 ProteinModelPortal:O44768 DIP:DIP-27246N
MINT:MINT-1113744 STRING:O44768 PaxDb:O44768 PRIDE:O44768
EnsemblMetazoa:K04F10.6a GeneID:187005 KEGG:cel:CELE_K04F10.6
UCSC:K04F10.6a CTD:187005 WormBase:K04F10.6a HOGENOM:HOG000019766
InParanoid:O44768 OMA:TWLFNIV NextBio:933748 ArrayExpress:O44768
Uniprot:O44768
Length = 441
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 71/221 (32%), Positives = 111/221 (50%)
Query: 470 LTRARVPIVKLMDPVTGISCDICI--NNLLAVV-NTKLLRDYAQIDVRLQQLAFIVKHWA 526
L +A++ I+K+M V GI CDI + + L+ + N+ L+R A ID R L IVK WA
Sbjct: 170 LVQAQIQILKVMT-VDGIDCDISVVMDRFLSSMHNSFLIRHLAHIDGRFAPLCAIVKQWA 228
Query: 527 KSRGVNVTYQGTLSSYAYVLMCIHFLQQRR-PAILPCLQGM-EKTYSVTVDD-IECAYFD 583
S V G +SYA VL+ IHFLQ P ILP LQ + +K + DD + + +
Sbjct: 229 ASTKVKDPKDGGFNSYALVLLVIHFLQCGTFPPILPNLQEIFKKDNFIAWDDKVYPSILN 288
Query: 584 ---QVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQ--EKDWTR 638
+ K + N + RL F Y++ ++ N I R + ++ + + R
Sbjct: 289 FGAPLPKPLPRIAPNNAPLARLFIEFLYYYSM-FNFKENYIGARPVMVMDRRTSQNNMVR 347
Query: 639 RIGNDRHLICIEDPFEVTHDLGRVVDKFS-IK-VLREEFER 677
N +CI+DPF+ H+ GR V + IK V+R +++
Sbjct: 348 SSTNKE--VCIQDPFD-EHNPGRTVRTLNRIKDVMRSTYQK 385
>UNIPROTKB|Q9H6E5 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA] [GO:0006379
"mRNA cleavage" evidence=IDA] [GO:0050265 "RNA uridylyltransferase
activity" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016180 "snRNA processing" evidence=IMP] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0071044 "histone
mRNA catabolic process" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0005524 GO:GO:0005730 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 EMBL:CH471076 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265 GO:GO:0016180
HOGENOM:HOG000115998 CTD:64852 HOVERGEN:HBG079670 OrthoDB:EOG480HWB
EMBL:AK025920 EMBL:AK026000 EMBL:AK292610 EMBL:AP002990
EMBL:BC005013 EMBL:BC110910 EMBL:BC128263 IPI:IPI01012096
RefSeq:NP_073741.2 UniGene:Hs.728983 PDB:2E5G PDBsum:2E5G
ProteinModelPortal:Q9H6E5 SMR:Q9H6E5 IntAct:Q9H6E5 STRING:Q9H6E5
DMDM:126302611 PaxDb:Q9H6E5 PRIDE:Q9H6E5 Ensembl:ENST00000476907
GeneID:64852 KEGG:hsa:64852 GeneCards:GC11M062342 HGNC:HGNC:26184
MIM:610641 neXtProt:NX_Q9H6E5 PharmGKB:PA162407405
InParanoid:Q9H6E5 EvolutionaryTrace:Q9H6E5 GenomeRNAi:64852
NextBio:66977 ArrayExpress:Q9H6E5 Bgee:Q9H6E5 CleanEx:HS_TUT1
Genevestigator:Q9H6E5 GermOnline:ENSG00000149016 Uniprot:Q9H6E5
Length = 874
Score = 194 (73.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 57/202 (28%), Positives = 108/202 (53%)
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
VQ + AR P+VK +G+ D+ ++N LA+ N++ L +++D R++ L + ++ WA
Sbjct: 358 VQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWA 417
Query: 527 KSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM-EKT---YSVTVDDIECAYF 582
+ RG++ + LS+YA L+ I+FLQ R P +LP + + +K V VD +C++
Sbjct: 418 QGRGLSGSGP-LLSNYALTLLVIYFLQTRDPPVLPTVSQLTQKAGEGEQVEVDGWDCSFP 476
Query: 583 DQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTI----SKQEKDWTR 638
+L S N E + L+ FF+ + D +++S+R G + W
Sbjct: 477 RDASRLEP--SINVEPLSSLLAQFFSCVSCW-DLRGSLLSLREGQALPVAGGLPSNLWEG 533
Query: 639 -RIGNDRHLICIEDPFEVTHDL 659
R+G + ++DPF+++H++
Sbjct: 534 LRLGP----LNLQDPFDLSHNV 551
Score = 56 (24.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE 445
+P ++ +GS NSF V D+D+ L + D E
Sbjct: 195 FPGCVVHPFGSSINSFDVHGCDLDLFLDLGDLE 227
>UNIPROTKB|F5H0R1 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355
SMART:SM00360 Pfam:PF03828 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
CTD:64852 EMBL:AP002990 RefSeq:NP_073741.2 UniGene:Hs.728983
GeneID:64852 KEGG:hsa:64852 HGNC:HGNC:26184 GenomeRNAi:64852
NextBio:66977 OMA:EQQGCAG IPI:IPI00946813 ProteinModelPortal:F5H0R1
SMR:F5H0R1 PhosphoSite:F5H0R1 PRIDE:F5H0R1 Ensembl:ENST00000308436
UCSC:uc001nto.2 ArrayExpress:F5H0R1 Bgee:F5H0R1 Uniprot:F5H0R1
Length = 912
Score = 194 (73.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 57/202 (28%), Positives = 108/202 (53%)
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
VQ + AR P+VK +G+ D+ ++N LA+ N++ L +++D R++ L + ++ WA
Sbjct: 396 VQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWA 455
Query: 527 KSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM-EKT---YSVTVDDIECAYF 582
+ RG++ + LS+YA L+ I+FLQ R P +LP + + +K V VD +C++
Sbjct: 456 QGRGLSGSGP-LLSNYALTLLVIYFLQTRDPPVLPTVSQLTQKAGEGEQVEVDGWDCSFP 514
Query: 583 DQVDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTI----SKQEKDWTR 638
+L S N E + L+ FF+ + D +++S+R G + W
Sbjct: 515 RDASRLEP--SINVEPLSSLLAQFFSCVSCW-DLRGSLLSLREGQALPVAGGLPSNLWEG 571
Query: 639 -RIGNDRHLICIEDPFEVTHDL 659
R+G + ++DPF+++H++
Sbjct: 572 LRLGP----LNLQDPFDLSHNV 589
Score = 56 (24.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE 445
+P ++ +GS NSF V D+D+ L + D E
Sbjct: 233 FPGCVVHPFGSSINSFDVHGCDLDLFLDLGDLE 265
>POMBASE|SPAC12G12.13c [details] [associations]
symbol:cid14 "poly(A) polymerase Cid14" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0007000 "nucleolus organization" evidence=IMP] [GO:0016075
"rRNA catabolic process" evidence=IGI] [GO:0016077 "snoRNA
catabolic process" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031125 "rRNA 3'-end processing"
evidence=IGI] [GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630
"ncRNA polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0065007 "biological regulation" evidence=NAS]
InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC12G12.13c Pfam:PF03828
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006397
GO:GO:0003723 GO:GO:0031499 GO:GO:0043630 GO:GO:0016075
GO:GO:0016077 GO:GO:0016078 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 PIR:S62544 RefSeq:NP_001018181.1
ProteinModelPortal:Q9UTN3 STRING:Q9UTN3
EnsemblFungi:SPAC12G12.13c.1 GeneID:3361384 KEGG:spo:SPAC12G12.13c
KO:K03514 OMA:LISHEEE OrthoDB:EOG43BQXK NextBio:20811434
GO:GO:0065007 GO:GO:0007000 GO:GO:0031125 Uniprot:Q9UTN3
Length = 684
Score = 197 (74.4 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 57/242 (23%), Positives = 105/242 (43%)
Query: 317 DSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDNRGKRLLSQRMRNLKW--QIECRADI 374
+SL ++E+ +R H + +K + R ++ ++ W Q + ++
Sbjct: 179 ESLKKSSKNEIPGFMRQRGRFFHE-ANEKSDSNRKRKRQAYELDSQSCPWHRQYKVEREV 237
Query: 375 GRL-NAPFLAIYESLIPAXXXXXXXXXXXXXXXXXXXXXWPDARLYLYGSCANSFGVSKS 433
R+ + L + + P WPD LY++GS + S
Sbjct: 238 SRIFHQDILHFIDYITPTPEEHAVRKTLVSRINQAVLQKWPDVSLYVFGSFETKLYLPTS 297
Query: 434 DIDVCLAINDSEINKSEV-LLKLADILQSDNLQN-VQALTRARVPIVKLMDPVTGISCDI 491
D+D+ + + ++ + LA L+ L + VQ +T A VPI+K +DP+T + DI
Sbjct: 298 DLDLVIISPEHHYRGTKKDMFVLAHHLKKLKLASEVQVITTANVPIIKFVDPLTKVHVDI 357
Query: 492 CINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTYQGTLSSYAYVLMCIHF 551
N + ++ + + L+ L I+KH+ R +N + G LSSYA V + + F
Sbjct: 358 SFNQPGGLKTCLVVNGFMKKYPALRPLVIIIKHFLNMRALNEVFLGGLSSYAIVCLVVSF 417
Query: 552 LQ 553
LQ
Sbjct: 418 LQ 419
>UNIPROTKB|I3LUY3 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:TYGLNYS
Ensembl:ENSSSCT00000025469 Uniprot:I3LUY3
Length = 500
Score = 156 (60.0 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 37 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 93
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N V L++D+ + L L ++K + R
Sbjct: 94 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRD 153
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
+N + G + SY+ LM + FLQ R A +P
Sbjct: 154 LNEVFTGGIGSYSLFLMAVSFLQLHPREDACIP 186
Score = 86 (35.3 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 191 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 250
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 251 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 283
>UNIPROTKB|Q8NDF8 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0071044 "histone mRNA catabolic process"
evidence=IMP] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0003677 GO:GO:0006260 GO:GO:0071044
GO:GO:0003887 eggNOG:COG5260 InterPro:IPR002058 EMBL:AK001141
EMBL:AK097589 EMBL:AF089897 EMBL:AL833922 IPI:IPI00383794
IPI:IPI00550722 IPI:IPI00940660 IPI:IPI01011361
RefSeq:NP_001035375.2 UniGene:Hs.514342 ProteinModelPortal:Q8NDF8
SMR:Q8NDF8 DIP:DIP-59183N IntAct:Q8NDF8 STRING:Q8NDF8
PhosphoSite:Q8NDF8 DMDM:59800139 PaxDb:Q8NDF8 PRIDE:Q8NDF8
GeneID:64282 KEGG:hsa:64282 CTD:64282 GeneCards:GC16P050186
HGNC:HGNC:30758 MIM:605540 neXtProt:NX_Q8NDF8 PharmGKB:PA134949693
HOGENOM:HOG000290646 HOVERGEN:HBG053489 GenomeRNAi:64282
NextBio:66196 CleanEx:HS_PAPD5 Genevestigator:Q8NDF8 Uniprot:Q8NDF8
Length = 572
Score = 156 (60.0 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 156 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 212
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N V L++D+ + L L ++K + R
Sbjct: 213 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRD 272
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
+N + G + SY+ LM + FLQ R A +P
Sbjct: 273 LNEVFTGGIGSYSLFLMAVSFLQLHPREDACIP 305
Score = 86 (35.3 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 310 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 369
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 370 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 402
>FB|FBgn0039251 [details] [associations]
symbol:Trf4-2 species:7227 "Drosophila melanogaster"
[GO:0007062 "sister chromatid cohesion" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS;NAS] InterPro:IPR002934
Pfam:PF01909 Pfam:PF03828 EMBL:AE014297 GO:GO:0003887
eggNOG:COG5260 InterPro:IPR002058 KO:K03514 GO:GO:0007062
GeneTree:ENSGT00400000022055 OrthoDB:EOG4DV42F EMBL:AY119052
RefSeq:NP_651313.1 UniGene:Dm.10309 SMR:Q9VC07 MINT:MINT-774233
EnsemblMetazoa:FBtr0084718 GeneID:42983 KEGG:dme:Dmel_CG17462
UCSC:CG17462-RA CTD:42983 FlyBase:FBgn0039251 InParanoid:Q9VC07
OMA:SFRTGLN GenomeRNAi:42983 NextBio:831646 Uniprot:Q9VC07
Length = 407
Score = 162 (62.1 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 46/147 (31%), Positives = 74/147 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQN---VQA 469
WP A + L+GS + SDID+ + + +L +L + L S + + V
Sbjct: 64 WPSASVDLFGSFRTGLNLPDSDIDLVVYY---KFWNPRLLHELQNELVSQGVTDPDTVTV 120
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTK-LLRDYAQIDVRLQQLAFIVKHWAKS 528
L +A VP+VK D ++ I D+ N++ + V L++D+ + L +L ++K +
Sbjct: 121 LDKASVPVVKFTDLISRIRFDVTFNSVASGVQAADLIKDFIRHFPELPKLVMVLKQFLSL 180
Query: 529 RGVNVTYQ-GTLSSYAYVLMCIHFLQQ 554
G N Y G +SSYA LM I FLQQ
Sbjct: 181 HGFNEVYNSGGVSSYALTLMVISFLQQ 207
Score = 74 (31.1 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 602 LVWAFFNYWAYGHDYASNVISVR-TGSTISKQEKDWTRRIGNDRHLICIEDPFEVTHDLG 660
L+ F +Y+ D+ ISV G + K T N + ++CIEDP T+D+G
Sbjct: 224 LLIQFLDYYGRKFDFFKYGISVLGQGGCVEKARLRSTLGENNWQSVLCIEDPVTPTNDIG 283
Query: 661 R 661
R
Sbjct: 284 R 284
>UNIPROTKB|E9PC61 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AC007597 InterPro:IPR002058 GO:GO:0016779
EMBL:AC007610 IPI:IPI00940660 HGNC:HGNC:30758
ProteinModelPortal:E9PC61 SMR:E9PC61 PRIDE:E9PC61
Ensembl:ENST00000357464 ArrayExpress:E9PC61 Bgee:E9PC61
Uniprot:E9PC61
Length = 619
Score = 156 (60.0 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 156 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 212
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N V L++D+ + L L ++K + R
Sbjct: 213 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRD 272
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
+N + G + SY+ LM + FLQ R A +P
Sbjct: 273 LNEVFTGGIGSYSLFLMAVSFLQLHPREDACIP 305
Score = 86 (35.3 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 310 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 369
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 370 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 402
>MGI|MGI:1917820 [details] [associations]
symbol:Papd5 "PAP associated domain containing 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR002934 Pfam:PF01909 MGI:MGI:1917820
Pfam:PF03828 GO:GO:0005634 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0071044 GO:GO:0003887 eggNOG:COG5260 InterPro:IPR002058
CTD:64282 HOGENOM:HOG000290646 HOVERGEN:HBG053489 EMBL:AK030850
EMBL:AK077553 EMBL:BC080314 EMBL:BC144796 EMBL:BC145737
IPI:IPI00223851 RefSeq:NP_001157969.1 RefSeq:NP_001157970.1
RefSeq:NP_001157971.1 UniGene:Mm.37825 ProteinModelPortal:Q68ED3
SMR:Q68ED3 PhosphoSite:Q68ED3 PRIDE:Q68ED3 GeneID:214627
KEGG:mmu:214627 UCSC:uc009mrf.1 InParanoid:A6H635 OrthoDB:EOG48SGT7
NextBio:374402 Bgee:Q68ED3 CleanEx:MM_PAPD5 Genevestigator:Q68ED3
GermOnline:ENSMUSG00000036779 Uniprot:Q68ED3
Length = 633
Score = 156 (60.0 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 170 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 226
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N V L++D+ + L L ++K + R
Sbjct: 227 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRD 286
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
+N + G + SY+ LM + FLQ R A +P
Sbjct: 287 LNEVFTGGIGSYSLFLMAVSFLQLHPREDACIP 319
Score = 86 (35.3 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 324 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 383
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 384 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 416
>UNIPROTKB|J9P5I2 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000045316 Uniprot:J9P5I2
Length = 614
Score = 156 (60.0 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 224 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 280
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N V L++D+ + L L ++K + R
Sbjct: 281 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRD 340
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
+N + G + SY+ LM + FLQ R A +P
Sbjct: 341 LNEVFTGGIGSYSLFLMAVSFLQLHPREDACIP 373
Score = 86 (35.3 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 378 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 437
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 438 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 470
Score = 37 (18.1 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 3 GGGGGESPLT 12
GGGGG S T
Sbjct: 10 GGGGGSSTAT 19
>DICTYBASE|DDB_G0295737 [details] [associations]
symbol:DDB_G0295737 "PAP/25A-associated
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 dictyBase:DDB_G0295737 Pfam:PF03828
EMBL:AAFI02000149 InterPro:IPR002058 GO:GO:0016779
RefSeq:XP_002649102.1 EnsemblProtists:DDB0252871 GeneID:8627367
KEGG:ddi:DDB_G0295737 OMA:NIDICFD Uniprot:C7G070
Length = 938
Score = 195 (73.7 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 66/232 (28%), Positives = 108/232 (46%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLA-INDSE-INK--SEVLLKLADIL---QSDNLQ 465
WP A + ++GS +++ + SDID+ ++ IN++E +NK + L DI+ D+
Sbjct: 482 WPKANVVVFGSFSSNLFIPSSDIDIQISGINNAESVNKYNQNPIRDLFDIIIRNHQDSFI 541
Query: 466 NVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHW 525
NV+ + A+VPI+K+ + + DIC + + NT +++ + ++ L I+K +
Sbjct: 542 NVRNIFGAKVPIIKMTSSHSHYNIDICFDTPNGIENTAVVKGLLKQYKSMRTLLLIIKFF 601
Query: 526 AKSRGVNVTYQGTLSSYAYVLMCIHFLQQRR-PAILPCLQGMEKTYSVTVDDIECAYFDQ 584
+N TY G + SYA LM + F+Q R P C K I Y
Sbjct: 602 LHQNNLNETYTGGIGSYALALMVVSFIQLRYVPHQYRCQSPTSK--------IRREYRHA 653
Query: 585 VDKLHGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDW 636
D +GS E + L FNY YG IS+ G K+E+ W
Sbjct: 654 GDATD-YGSMLIEFL-ELYGRSFNYSLYG-------ISLENGGYYYKKEEQW 696
Score = 45 (20.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 316 VDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDNRGKRLLSQRMRNLK 365
+ +LP SEL ++ ++ ++S DKE DN+ + Q+ ++ K
Sbjct: 25 LSGILP---SELNQKILQQQQQQQQSS-DKEQHKDNKDHQQQQQQQKDSK 70
Score = 44 (20.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 322 DDESELKNDTHERNDKKHRNSRDKEIRSDNRGKRLLSQRMRN 363
D E N H++ ++ ++S KE DN+ +S N
Sbjct: 49 DKEQHKDNKDHQQQQQQQKDS--KEPLKDNKENNNISDNNNN 88
Score = 43 (20.2 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 185 HRNLENSREHDLRLGKQHYGSTPPPGFSNKARVGGSGNS 223
H N E S HD K+ T PP + S +S
Sbjct: 248 HSNKEFSMIHDSEDDKKESSMTQPPSPKKTSSSSSSSSS 286
Score = 41 (19.5 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 329 NDTHERNDKKHRNSRDKEIRSDNR 352
N+ + N + N R+K+ R NR
Sbjct: 126 NNNNNNNSNNNNNRREKD-RDSNR 148
>UNIPROTKB|F1PHH1 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000015808 Uniprot:F1PHH1
Length = 673
Score = 156 (60.0 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 210 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 266
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N V L++D+ + L L ++K + R
Sbjct: 267 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRD 326
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
+N + G + SY+ LM + FLQ R A +P
Sbjct: 327 LNEVFTGGIGSYSLFLMAVSFLQLHPREDACIP 359
Score = 86 (35.3 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 364 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 423
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 424 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 456
Score = 38 (18.4 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 2 TGGGGGESPLT 12
+GGGGG S T
Sbjct: 5 SGGGGGSSTAT 15
>UNIPROTKB|J9P9B2 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
OMA:TYGLNYS EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000046476 Uniprot:J9P9B2
Length = 710
Score = 156 (60.0 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 247 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 303
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N V L++D+ + L L ++K + R
Sbjct: 304 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRD 363
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
+N + G + SY+ LM + FLQ R A +P
Sbjct: 364 LNEVFTGGIGSYSLFLMAVSFLQLHPREDACIP 396
Score = 86 (35.3 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 401 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 460
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 461 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 493
Score = 38 (18.4 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 2 TGGGGGESPLT 12
+GGGGG S T
Sbjct: 32 SGGGGGSSTAT 42
>UNIPROTKB|B4DV38 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AC007597 InterPro:IPR002058 GO:GO:0016779
EMBL:AC007610 RefSeq:NP_001035375.2 UniGene:Hs.514342 GeneID:64282
KEGG:hsa:64282 CTD:64282 HGNC:HGNC:30758 PharmGKB:PA134949693
HOGENOM:HOG000290646 HOVERGEN:HBG053489 GenomeRNAi:64282
NextBio:66196 EMBL:AK300918 IPI:IPI00643763 RefSeq:NP_001035374.2
SMR:B4DV38 STRING:B4DV38 Ensembl:ENST00000436909 UCSC:uc002efz.3
OMA:TYGLNYS Uniprot:B4DV38
Length = 698
Score = 156 (60.0 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 235 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 291
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRG 530
+A VPI+KL D T + DI N V L++D+ + L L ++K + R
Sbjct: 292 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRD 351
Query: 531 VNVTYQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
+N + G + SY+ LM + FLQ R A +P
Sbjct: 352 LNEVFTGGIGSYSLFLMAVSFLQLHPREDACIP 384
Score = 86 (35.3 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 389 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 448
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 449 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 481
Score = 37 (18.1 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 4 GGGGESPLTPACNGG 18
GGGG S + GG
Sbjct: 32 GGGGSSSSSSTATGG 46
>SGD|S000005243 [details] [associations]
symbol:TRF5 "Non-canonical poly(A) polymerase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IDA]
[GO:0071051 "polyadenylation-dependent snoRNA 3'-end processing"
evidence=IGI] [GO:0043629 "ncRNA polyadenylation" evidence=IGI]
[GO:0034475 "U4 snRNA 3'-end processing" evidence=IGI;IMP]
[GO:0007067 "mitosis" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
catabolic process" evidence=IGI;IMP] [GO:0071036 "nuclear
polyadenylation-dependent snoRNA catabolic process" evidence=IGI]
[GO:0071037 "nuclear polyadenylation-dependent snRNA catabolic
process" evidence=IGI] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI]
[GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
process" evidence=IGI] [GO:0071044 "histone mRNA catabolic process"
evidence=IGI] [GO:0071050 "snoRNA polyadenylation" evidence=IGI]
[GO:0071042 "nuclear polyadenylation-dependent mRNA catabolic
process" evidence=IGI] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IGI;ISS;IMP;IDA] [GO:0007049
"cell cycle" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
SGD:S000005243 Pfam:PF03828 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 EMBL:BK006947 GO:GO:0031499
GO:GO:0071039 GO:GO:0071035 GO:GO:0071036 GO:GO:0071037
GO:GO:0071038 GO:GO:0071044 EMBL:U23084 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 OrthoDB:EOG43BQXK GO:GO:0071042
GO:GO:0071051 GeneTree:ENSGT00400000022055 GO:GO:0034475
HOGENOM:HOG000246586 GO:GO:0071050 EMBL:U47282 EMBL:Z71575
PIR:S60401 RefSeq:NP_014100.2 ProteinModelPortal:P48561 SMR:P48561
IntAct:P48561 MINT:MINT-1776475 STRING:P48561 EnsemblFungi:YNL299W
GeneID:855417 KEGG:sce:YNL299W KO:K12596 OMA:DFNDERD NextBio:979271
Genevestigator:P48561 GermOnline:YNL299W Uniprot:P48561
Length = 642
Score = 164 (62.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 41/150 (27%), Positives = 77/150 (51%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSE--VLLKLADILQSDNLQ-NVQA 469
W DA L+++GS A + SDID C+ +N +K + + +LA L++ L ++
Sbjct: 212 WSDADLHVFGSFATDLYLPGSDID-CV-VNSRNRDKEDRNYIYELARHLKNKGLAIRMEV 269
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
+ + RVPI+K ++P + + D+ + KL+R++ + L++L I+K + SR
Sbjct: 270 IVKTRVPIIKFIEPQSQLHIDVSFERTNGLEAAKLIREWLRDSPGLRELVLIIKQFLHSR 329
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQQRRPAI 559
+N + G L + + + FL P I
Sbjct: 330 RLNNVHTGGLGGFTVICLVYSFLNMH-PRI 358
Score = 67 (28.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 22/97 (22%), Positives = 44/97 (45%)
Query: 597 ESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQEKDW-TRRIGNDRHLICIEDPFEV 655
+++G L+ FF + Y IS+ G + W T + + I+DP +
Sbjct: 367 DNLGVLLIDFFELYGKNFGYDDVAISISDGYASYIPKSCWRTLEPSRSKFSLAIQDPGDP 426
Query: 656 THDLGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKL 692
+++ R F++K +++ F A E++ N C +L
Sbjct: 427 NNNISR--GSFNMKDIKKAFAGAFELLV---NKCWEL 458
>UNIPROTKB|F1MNP2 [details] [associations]
symbol:F1MNP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:TYGLNYS
EMBL:DAAA02046385 IPI:IPI00698517 Ensembl:ENSBTAT00000010440
Uniprot:F1MNP2
Length = 460
Score = 137 (53.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 417 RLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQALTRAR 474
++ ++GS + SDID+ + + + E L+ + D+ V+ L +A
Sbjct: 1 QVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVLDKAT 57
Query: 475 VPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVT 534
VPI+KL D T + DI N V L++D+ + L L ++K + R +N
Sbjct: 58 VPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRDLNEV 117
Query: 535 YQGTLSSYAYVLMCIHFLQ--QRRPAILP 561
+ G + SY+ LM + FLQ R A +P
Sbjct: 118 FTGGIGSYSLFLMAVSFLQLHPREDACIP 146
Score = 86 (35.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 151 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 210
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 211 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 243
>UNIPROTKB|H3BRB1 [details] [associations]
symbol:MIR3654 "Protein MIR3654" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS50102 SMART:SM00355 SMART:SM00360 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
EMBL:AP001363 EMBL:AP002990 ProteinModelPortal:H3BRB1 SMR:H3BRB1
Ensembl:ENST00000496634 HGNC:HGNC:38896 Bgee:H3BRB1 Uniprot:H3BRB1
Length = 525
Score = 166 (63.5 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 39/119 (32%), Positives = 71/119 (59%)
Query: 467 VQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWA 526
VQ + AR P+VK +G+ D+ ++N LA+ N++ L +++D R++ L + ++ WA
Sbjct: 358 VQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWA 417
Query: 527 KSRGVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGM-EKT---YSVTVDDIECAY 581
+ RG++ + LS+YA L+ I+FLQ R P +LP + + +K V VD +C++
Sbjct: 418 QGRGLSGSGP-LLSNYALTLLVIYFLQTRDPPVLPTVSQLTQKAGEGEQVEVDGWDCSF 475
Score = 56 (24.8 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE 445
+P ++ +GS NSF V D+D+ L + D E
Sbjct: 195 FPGCVVHPFGSSINSFDVHGCDLDLFLDLGDLE 227
>TAIR|locus:2164047 [details] [associations]
symbol:AT5G53770 "AT5G53770" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] [GO:0009688 "abscisic acid
biosynthetic process" evidence=RCA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:CP002688 eggNOG:COG5260 InterPro:IPR002058
KO:K03514 GO:GO:0016779 EMBL:BT002764 IPI:IPI00522291
RefSeq:NP_568798.1 UniGene:At.6981 ProteinModelPortal:Q84WU1
SMR:Q84WU1 PaxDb:Q84WU1 PRIDE:Q84WU1 EnsemblPlants:AT5G53770.1
GeneID:835458 KEGG:ath:AT5G53770 TAIR:At5g53770 InParanoid:Q84WU1
OMA:FFDFYGR PhylomeDB:Q84WU1 ProtClustDB:CLSN2690011
ArrayExpress:Q84WU1 Genevestigator:Q84WU1 Uniprot:Q84WU1
Length = 530
Score = 144 (55.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 58/266 (21%), Positives = 113/266 (42%)
Query: 296 ENGPGYSQGGDDMDDFGEDL--VDSLLPDDES-ELKNDTHERNDKKHRNSRDKEIRSDNR 352
E YS ++ DF +D V+S D S +++ +T E + + +
Sbjct: 35 EESHQYSVFRKEISDFPDDTTPVESATVDFFSLDVEGETTENGVEPVTPVVVASKKKSKK 94
Query: 353 GKRLLSQRMRNLKWQIE---CRADIGRLNAPFLAIYESLIPAXXXXXXXXXXXXXXXXXX 409
K+ R+ + W E + + +L+ + + L+P
Sbjct: 95 RKKDEEPRLES-NWFSENSFSKIPMLQLHKEIVDFCDFLLPTQAEKAERDAAVESVSSVI 153
Query: 410 XXXWPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLK-LADILQSDNL-QNV 467
WP ++ ++GS + SDIDV I +S + ++ L+ L+ L + +N+
Sbjct: 154 KYIWPSCKVEVFGSYKTGLYLPTSDIDV--VILESGLTNPQLGLRALSRALSQRGIAKNL 211
Query: 468 QALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAK 527
+ +ARVPI+K ++ + I+ D+ + + ++D L+ L I+K + +
Sbjct: 212 LVIAKARVPIIKFVEKKSNIAFDLSFDMENGPKAAEFIQDAVSKLPPLRPLCLILKVFLQ 271
Query: 528 SRGVNVTYQGTLSSYAYVLMCIHFLQ 553
R +N Y G + SYA + M I FL+
Sbjct: 272 QRELNEVYSGGIGSYALLAMLIAFLK 297
Score = 68 (29.0 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 593 SRNKESIGRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIED 651
S + ++G L+ FF+++ + A IS + G S SK K + R LI IED
Sbjct: 304 SAPEHNLGVLLVKFFDFYGRKLNTADVGISCKMGGSFFSKYNKGFLNRARPS--LISIED 361
Query: 652 PFEVTHDLGRVVDKFSIKVLREEFERA 678
P +D+G+ F+ +R F A
Sbjct: 362 PQTPENDIGK--SSFNYFQIRSAFAMA 386
>UNIPROTKB|E2RJX8 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042493 "response to drug" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 Pfam:PF03828 GO:GO:0005634 GO:GO:0042493
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
OMA:DNRIKIK EMBL:AAEX03017172 ProteinModelPortal:E2RJX8
Ensembl:ENSCAFT00000016392 Uniprot:E2RJX8
Length = 542
Score = 161 (61.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 43/144 (29%), Positives = 74/144 (51%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ---NVQA 469
WP A + ++GS + + SDID+ + + + + L L L+ N+ +++
Sbjct: 26 WPAADVQIFGSFSTGLYLPTSDIDLVVF---GKWERPPLQL-LEQALRKHNVAEPCSIKV 81
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
L +A VPI+KL D T + DI N V +L+++Y + L L ++K + R
Sbjct: 82 LDKATVPIIKLTDQETEVKVDISFNMETGVRAAELIKNYMKKYSLLPYLILVLKQFLLQR 141
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQ 553
+N + G +SSY+ +LM I FLQ
Sbjct: 142 DLNEVFTGGISSYSLILMAISFLQ 165
>RGD|1307356 [details] [associations]
symbol:Papd7 "PAP associated domain containing 7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA;ISO] InterPro:IPR002934
Pfam:PF01909 Pfam:PF03828 RGD:1307356 GO:GO:0005634 GO:GO:0042493
InterPro:IPR002058 KO:K03514 GO:GO:0016779 EMBL:CH474002
GeneTree:ENSGT00400000022055 CTD:11044 OrthoDB:EOG4N04DQ
IPI:IPI00870911 RefSeq:NP_001100803.1 UniGene:Rn.22554
Ensembl:ENSRNOT00000023712 GeneID:306672 KEGG:rno:306672
UCSC:RGD:1307356 NextBio:656405 Uniprot:D3ZSY1
Length = 541
Score = 159 (61.0 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ---NVQA 469
WP A + ++GS + + SDID+ + + + + L L L+ N+ +++
Sbjct: 26 WPSADVQIFGSFSTGLYLPTSDIDLVVF---GKWERPPLQL-LEQALRKHNVAEPCSIKV 81
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
L +A VPI+KL D T + DI N V + +++Y + L L ++K + R
Sbjct: 82 LDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKKYSLLPYLILVLKQFLLQR 141
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQ 553
+N + G +SSY+ +LM I FLQ
Sbjct: 142 DLNEVFTGGISSYSLILMAISFLQ 165
>UNIPROTKB|Q5XG87 [details] [associations]
symbol:PAPD7 "DNA polymerase sigma" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=NAS] [GO:0007062 "sister
chromatid cohesion" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043221 "SMC family protein binding"
evidence=TAS] [GO:0042493 "response to drug" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 GO:GO:0005634
GO:GO:0051301 GO:GO:0042493 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0006302 GO:GO:0007076 EMBL:CH471102
GO:GO:0003887 eggNOG:COG5260 InterPro:IPR002058 KO:K03514
GO:GO:0007062 HOGENOM:HOG000290646 EMBL:AF089896 EMBL:AB005754
EMBL:AY623114 EMBL:AK289857 EMBL:BC084567 EMBL:BC117137
EMBL:BC126106 IPI:IPI00418630 RefSeq:NP_001165276.1
RefSeq:NP_001165277.1 RefSeq:NP_008930.1 UniGene:Hs.481542
ProteinModelPortal:Q5XG87 SMR:Q5XG87 STRING:Q5XG87
PhosphoSite:Q5XG87 DMDM:60392922 PaxDb:Q5XG87 PRIDE:Q5XG87
DNASU:11044 Ensembl:ENST00000230859 GeneID:11044 KEGG:hsa:11044
UCSC:uc003jdx.1 CTD:11044 GeneCards:GC05P006714 HGNC:HGNC:16705
HPA:HPA045487 HPA:HPA046742 MIM:605198 neXtProt:NX_Q5XG87
PharmGKB:PA33523 HOVERGEN:HBG053636 InParanoid:Q5XG87 OMA:DNRIKIK
OrthoDB:EOG4N04DQ PhylomeDB:Q5XG87 ChiTaRS:PAPD7 GenomeRNAi:11044
NextBio:41972 ArrayExpress:Q5XG87 Bgee:Q5XG87 CleanEx:HS_POLS
Genevestigator:Q5XG87 GermOnline:ENSG00000112941 GO:GO:0043221
Uniprot:Q5XG87
Length = 542
Score = 158 (60.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ---NVQA 469
WP A + ++GS + + SDID+ + + + + L L L+ N+ +++
Sbjct: 26 WPTADVQIFGSFSTGLYLPTSDIDLVVF---GKWERPPLQL-LEQALRKHNVAEPCSIKV 81
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
L +A VPI+KL D T + DI N V + +++Y + L L ++K + R
Sbjct: 82 LDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKKYSLLPYLILVLKQFLLQR 141
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQ 553
+N + G +SSY+ +LM I FLQ
Sbjct: 142 DLNEVFTGGISSYSLILMAISFLQ 165
>MGI|MGI:2682295 [details] [associations]
symbol:Papd7 "PAP associated domain containing 7"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 MGI:MGI:2682295 Pfam:PF03828
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 eggNOG:COG5260
InterPro:IPR002058 KO:K03514 HOGENOM:HOG000290646 CTD:11044
HOVERGEN:HBG053636 OrthoDB:EOG4N04DQ ChiTaRS:PAPD7 EMBL:BC059846
IPI:IPI00387593 RefSeq:NP_941002.2 UniGene:Mm.315959
ProteinModelPortal:Q6PB75 SMR:Q6PB75 STRING:Q6PB75
PhosphoSite:Q6PB75 PRIDE:Q6PB75 GeneID:210106 KEGG:mmu:210106
UCSC:uc007rch.2 InParanoid:Q6PB75 NextBio:372866 CleanEx:MM_POLS
Genevestigator:Q6PB75 GermOnline:ENSMUSG00000034575 Uniprot:Q6PB75
Length = 542
Score = 158 (60.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 42/144 (29%), Positives = 73/144 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQ---NVQA 469
WP A + ++GS + + SDID+ + + + + L L L+ N+ +++
Sbjct: 26 WPTADVQIFGSFSTGLYLPTSDIDLVVF---GKWERPPLQL-LEQALRKHNVAEPCSIKV 81
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
L +A VPI+KL D T + DI N V + +++Y + L L ++K + R
Sbjct: 82 LDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKKYSLLPYLILVLKQFLLQR 141
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQ 553
+N + G +SSY+ +LM I FLQ
Sbjct: 142 DLNEVFTGGISSYSLILMAISFLQ 165
>UNIPROTKB|F1S0S9 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042493 "response to drug" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:DNRIKIK
EMBL:CU856020 Ensembl:ENSSSCT00000018620 Uniprot:F1S0S9
Length = 541
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNLQNVQALTR 472
WP A + ++GS + + SDID+ + E ++L + + +++ L +
Sbjct: 26 WPTAEVQIFGSFSTGLYLPTSDIDL-VVFGKWERPPLQLLEQALRKHKVAEPCSIKVLDK 84
Query: 473 ARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVN 532
A VPI+KL D T + DI N V + +++Y + L L ++K + R +N
Sbjct: 85 ATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKKYSLLPYLILVLKQFLLQRDLN 144
Query: 533 VTYQGTLSSYAYVLMCIHFLQ 553
+ G +SSY+ +LM I FLQ
Sbjct: 145 EVFTGGISSYSLILMAISFLQ 165
>WB|WBGene00014115 [details] [associations]
symbol:gld-4 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005524 GO:GO:0009792 GO:GO:0007126
GO:GO:0040010 GO:GO:0048471 GO:GO:0046872 GO:GO:0006378
GO:GO:0040035 GO:GO:0007281 GO:GO:0043186 GO:GO:0004652
InterPro:IPR002058 KO:K03514 EMBL:Z79759 EMBL:FJ610054
RefSeq:NP_492446.3 UniGene:Cel.16131 ProteinModelPortal:G5EFL0
SMR:G5EFL0 EnsemblMetazoa:ZK858.1 GeneID:172735
KEGG:cel:CELE_ZK858.1 CTD:172735 WormBase:ZK858.1
GeneTree:ENSGT00400000022055 OMA:KISMFGS NextBio:876795
Uniprot:G5EFL0
Length = 845
Score = 159 (61.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 417 RLYLYGSCANSFGVSKSDIDVCLAINDSEINKSEVLLKLADILQSDNL-QNVQALTRARV 475
++ ++GS + + SDIDV + +D + L + A L++DN+ ++V A V
Sbjct: 122 KISMFGSLRTNLFLPTSDIDVLVECDDWVGTPGDWLAETARGLEADNIAESVMVYGGAFV 181
Query: 476 PIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSRGVNVTY 535
PIVK++D T +S DI N + V + + ++ L ++K + R +N T+
Sbjct: 182 PIVKMVDRDTRLSIDISFNTVQGVRAASYIAKVKEEFPLIEPLVLLLKQFLHYRNLNQTF 241
Query: 536 QGTLSSYAYVLMCIHFLQ 553
G LSSY VL+ ++F Q
Sbjct: 242 TGGLSSYGLVLLLVNFFQ 259
Score = 45 (20.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 647 ICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAEIM 682
+ +EDP +D+GR FS + F +A +I+
Sbjct: 326 LALEDPLLTANDVGRSTYNFSS--IANAFGQAFQIL 359
>FB|FBgn0035889 [details] [associations]
symbol:mkg-p "monkey king protein" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
InterPro:IPR015880 Pfam:PF01909 SMART:SM00355 GO:GO:0008270
GO:GO:0005622 eggNOG:COG5260 GO:GO:0016779 EMBL:AY562976
ProteinModelPortal:Q6Q376 SMR:Q6Q376 PRIDE:Q6Q376
FlyBase:FBgn0035889 InParanoid:Q6Q376 OrthoDB:EOG4WH71R
ArrayExpress:Q6Q376 Bgee:Q6Q376 Uniprot:Q6Q376
Length = 659
Score = 153 (58.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 63/293 (21%), Positives = 139/293 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSE--INKSEVLLKLADILQ-SDNLQNVQA 469
W R++ +GS + +SDID+ L N ++ + +++ K + L+ S +V
Sbjct: 117 WGRVRVFPFGSLVTGLALKESDIDLFLEPNGNQPPLFHNQLYNKTSHFLRRSKCFADVFT 176
Query: 470 LTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVRLQQLAFIVKHWAKSR 529
+ A VPI++ +TG++ DI ++N ++ N++ + + + R+++L +K WAK
Sbjct: 177 IRHASVPIIRCKHQLTGLNIDINMSNPNSIYNSRFVGELMFRNERIRELCLFLKIWAKK- 235
Query: 530 GVNVTYQGTLSSYAYVLMCIHFLQQRRPAILPCLQGMEKTYS-VTVDDIECAYFDQVDKL 588
+ + G ++SY + + I LQ R ++P ++ ++ V + + AY +D
Sbjct: 236 -LKLISHGGMTSYCLISLIIVNLQVNR--LVPSVKELQSLCPPVILSGVNYAY--SLDLT 290
Query: 589 HGFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTISKQ----------EKDWTR 638
+R ++ L+ FF Y+ + + +V+S G + K+ E D +
Sbjct: 291 PPIPAR-LTTLD-LLKNFFIYYCTVN-FDKSVLSPFLGGCVDKETTLGMPGGFPEYDEQQ 347
Query: 639 RIGNDR-----------HLICIEDPFEVTHDLGRVVDKFSIKVLREEFERAAE 680
++ +D +C++DPFE++ ++ + V ++ R+ AA+
Sbjct: 348 KLVHDAIGAPPDAFQLDRAMCVQDPFELSRNVAKSVSISNLCYFRQCLVLAAQ 400
>DICTYBASE|DDB_G0274847 [details] [associations]
symbol:DDB_G0274847 "nucleotidyltransferase
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 dictyBase:DDB_G0274847 Pfam:PF03828
EMBL:AAFI02000012 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779
RefSeq:XP_644037.1 ProteinModelPortal:Q555M9
EnsemblProtists:DDB0305227 GeneID:8619467 KEGG:ddi:DDB_G0274847
InParanoid:Q555M9 OMA:ANSTCEQ Uniprot:Q555M9
Length = 1880
Score = 152 (58.6 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 50/153 (32%), Positives = 78/153 (50%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCLAINDSEINK---SEVLLKLADI-LQSD-N--LQ 465
W +A L +YGS + SDID+ + + K ++ LLK+ + ++D N +
Sbjct: 1510 WSNADLDIYGSFMTGLWLPSSDIDIVVNYGKNMAIKPKNAQFLLKVLEKQFRTDLNGMIL 1569
Query: 466 NVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKLL-RDYAQIDVR----LQQLAF 520
+ + A++P++KL+ IS DI V+T + RD VR L LA
Sbjct: 1570 TMLCIPSAKIPVIKLVT-TENISVDISFRESPTSVHTGIAARDLVADCVREIIGLYPLAI 1628
Query: 521 IVKHWAKSRGVNVTYQGTLSSYAYVLMCIHFLQ 553
++K + + RG+N TY G LSSY VLM I FL+
Sbjct: 1629 VLKWFLRERGLNNTYTGGLSSYCLVLMLISFLK 1661
Score = 56 (24.8 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 15/79 (18%), Positives = 34/79 (43%)
Query: 300 GYSQGGDDMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDNRGKRLLSQ 359
G++ DD +D V L E + ++N+ + NS+D+ ++ + Q
Sbjct: 1045 GFNDLEDDEEDQNNSYVQDLTKQIEKHFSLNDEKKNNNNNNNSQDETLKQPIAKQHQQQQ 1104
Query: 360 RMRNLKWQIECRADIGRLN 378
+ + + Q+ + + LN
Sbjct: 1105 QNQQQQQQVNSSSKLN-LN 1122
Score = 50 (22.7 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 158 NLKYNLDRNSQFDQPRASSISNPNSFLHRNLENSREHDLRLGKQHYGSTPPPGFSNKARV 217
N L+ +S Q +++ + PN+ + N ++ + G+ G+ +N
Sbjct: 695 NSSKKLNESSDSTQSDSTNRTKPNANPNTNTSIRKKRKKKSGRG--GNNNNNNNNNNQGR 752
Query: 218 GGSGNSRRGFEHN 230
GG+ NS G H+
Sbjct: 753 GGNSNSNHGGHHH 765
Score = 47 (21.6 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 306 DDMDDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRDKEIRSDN 351
+ +D G DS DDE+ N+ + N+ + N+ + ++N
Sbjct: 51 ESVDIPGMPSFDSDSIDDENNNNNNNNNNNNNNNNNNNNNNNNNNN 96
Score = 45 (20.9 bits), Expect = 8.3e-06, Sum P(4) = 8.3e-06
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 309 DDFGEDLVDSLLPDDESELKNDTHERNDKKHRNSRD-KEIRSDNRGKRLLSQRMRNLKWQ 367
++F ED D D+ES+ ++D E +D+++R ++ D + + +++L Q
Sbjct: 1012 EEFEEDDEDEG-SDEESD-EDDEDEESDEEYREEDGFNDLEDDEEDQN--NSYVQDLTKQ 1067
Query: 368 IE 369
IE
Sbjct: 1068 IE 1069
Score = 44 (20.5 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 144 QVQPDSLLNLNH-LENLKYNLDRNSQFDQ 171
QV S LNLN L+N+ N + N+Q Q
Sbjct: 1112 QVNSSSKLNLNQSLDNIP-NANNNNQNGQ 1139
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
Identities = 7/36 (19%), Positives = 17/36 (47%)
Query: 329 NDTHERNDKKHRNSRDKEIRSDNRGKRLLSQRMRNL 364
N+ + N+ + N+ + ++N S + RN+
Sbjct: 854 NNNNNNNNNNNNNNNNNNNNNNNNNSNHSSNKSRNI 889
Score = 40 (19.1 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 152 NLNHLENLKYNLDRNSQFDQPRASSISNPNS 182
N NH N N+ +S +++ +N NS
Sbjct: 878 NSNHSSNKSRNISTSSSTSTSTSTNNTNNNS 908
Score = 38 (18.4 bits), Expect = 3.9e-05, Sum P(4) = 3.9e-05
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 324 ESELKNDTHERNDKKHRNSRDKEIRSDN 351
++ KN+ + ND + N+ + I ++N
Sbjct: 1274 DNNQKNNNNNNNDNNNNNNNNN-INNNN 1300
Score = 37 (18.1 bits), Expect = 7.1e-07, Sum P(4) = 7.1e-07
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 598 SIGRLVWAFFNYWAYGHDYASNVISVRTG 626
+IG + F Y+ +Y IS+ G
Sbjct: 1732 NIGCALMRFLEYYGVNFNYQVTGISIEEG 1760
Score = 37 (18.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 154 NHLENLKYNLDRNSQFDQPRASSISNPNSFLHRNLENSREHD 195
N+ N N + N+ + ++ISN N+ + N N+ ++
Sbjct: 1298 NNNNNTSNNNNNNNNNNINNNNNISNNNNNNNNNNNNNNNNN 1339
>UNIPROTKB|H3BQM0 [details] [associations]
symbol:PAPD5 "PAP-associated domain-containing protein 5"
species:9606 "Homo sapiens" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 EMBL:AC007597 InterPro:IPR002058 GO:GO:0016779
EMBL:AC007610 HGNC:HGNC:30758 ProteinModelPortal:H3BQM0 SMR:H3BQM0
Ensembl:ENST00000561678 Bgee:H3BQM0 Uniprot:H3BQM0
Length = 588
Score = 101 (40.6 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 168 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 224
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVR 514
+A VPI+KL D T + DI N V L++D+ ++ R
Sbjct: 225 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKLHPR 268
Score = 86 (35.3 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 279 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 338
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 339 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 371
>RGD|1309587 [details] [associations]
symbol:Papd5 "PAP associated domain containing 5" species:10116
"Rattus norvegicus" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
RGD:1309587 InterPro:IPR002058 GO:GO:0016779 IPI:IPI00947804
Ensembl:ENSRNOT00000066059 ArrayExpress:D3ZZS9 Uniprot:D3ZZS9
Length = 590
Score = 101 (40.6 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 170 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 226
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVR 514
+A VPI+KL D T + DI N V L++D+ ++ R
Sbjct: 227 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKLHPR 270
Score = 86 (35.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 281 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 340
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 341 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKCY 373
>UNIPROTKB|J9PAB7 [details] [associations]
symbol:PAPD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
EMBL:AAEX03001621 EMBL:AAEX03001622 EMBL:AAEX03001623
Ensembl:ENSCAFT00000049926 Uniprot:J9PAB7
Length = 598
Score = 101 (40.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 413 WPDARLYLYGSCANSFGVSKSDIDVCL--AINDSEINKSEVLLKLADILQSDNLQNVQAL 470
WP A + ++GS + SDID+ + + + E L+ + D+ V+ L
Sbjct: 178 WPSADVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDS---VKVL 234
Query: 471 TRARVPIVKLMDPVTGISCDICINNLLAVVNTKLLRDYAQIDVR 514
+A VPI+KL D T + DI N V L++D+ ++ R
Sbjct: 235 DKATVPIIKLTDSFTEVKVDISFNVQNGVRAADLIKDFTKLHPR 278
Score = 86 (35.3 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 600 GRLVWAFFNYWAYGHDYASNVISVRTG-STISKQEKDWTRRIGNDRHLICIEDPFEVTHD 658
G L+ FF + +Y I ++ G S ++K E G ++ IEDP + +D
Sbjct: 289 GVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLDGYRPSMLYIEDPLQPGND 348
Query: 659 LGRVVDKFSIKVLREEFERAAEIMQHDPNPCVKLF 693
+GR + +++ F+ A ++ H +P K +
Sbjct: 349 VGR--SSYGAMQVKQAFDYAYVVLSHAVSPIAKYY 381
>UNIPROTKB|H0YDJ1 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
Pfam:PF03828 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AL513218 InterPro:IPR002058
EMBL:AL138849 HGNC:HGNC:28981 ChiTaRS:ZCCHC11 EMBL:AL591167
Ensembl:ENST00000474453 Uniprot:H0YDJ1
Length = 337
Score = 116 (45.9 bits), Expect = 0.00092, P = 0.00092
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 574 VDDIECAYFDQVDKLH----GFGSRNKESIGRLVWAFFNYWAYGHDYASNVISVRTGSTI 629
VD +FD+ ++L G +N ES+G L ++ D+ VIS+R +
Sbjct: 7 VDGWNAFFFDKTEELKKRLPSLG-KNTESLGELWLGLLRFYTEEFDFKEYVISIRQKKLL 65
Query: 630 SKQEKDWTRRIGNDRHLICIEDPFEVTHDLGRVVDKFSIKVLREEF 675
+ EK WT + I IEDPF++ H+LG V + + + F
Sbjct: 66 TTFEKQWTSKC------IAIEDPFDLNHNLGAGVSRKMTNFIMKAF 105
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 699 612 0.00088 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 107
No. of states in DFA: 617 (66 KB)
Total size of DFA: 356 KB (2177 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.74u 0.14s 53.88t Elapsed: 00:00:03
Total cpu time: 53.77u 0.14s 53.91t Elapsed: 00:00:03
Start: Tue May 21 16:59:49 2013 End: Tue May 21 16:59:52 2013
WARNINGS ISSUED: 1