BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005381
(699 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q08602|PGTA_RAT Geranylgeranyl transferase type-2 subunit alpha OS=Rattus
norvegicus GN=Rabggta PE=1 SV=1
Length = 567
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 181/625 (28%), Positives = 268/625 (42%), Gaps = 109/625 (17%)
Query: 1 MHGRPRKPLKPEDAAASAAKAE-KLRVLQSQ---FLHNHHNHIYSKEAVELSTKLLETNP 56
MHGR + E A A + E KL++ QS + +EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +QH E + P+ +++ EL +ES LR N KSYG WHHR W+LS
Sbjct: 61 DFATLWNCRREVLQH--LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F +AD RNFH W+YRRFVAA + +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHNRSLLLSNLLKRKVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233
S+WH RS LL L + G + E VL E E V A FTDP+DQS WFYH WLL +
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGR 238
Query: 234 TVRVDSPQLVSSWPTPGSDLILLGDRCLDGCASSPFTRFHLDSRTFPLVLYFNQAVEGVN 293
D V + + CL C S P T + SR L+L ++A
Sbjct: 239 AEPHDVLCCVH---------VSREEACLSVCFSRPLT---VGSRMGTLLLMVDEA----- 281
Query: 294 SSTITVDSELNTNKDLVWKPLSSCNSKAAQVWVTQLNLPDGNTHSSKVFPVEVSLGHSQG 353
PLS W T PDG S V+ ++
Sbjct: 282 -------------------PLSV-------EWRT----PDGRNRPSHVWLCDLPAASLND 311
Query: 354 IISSSGFHYSNPFCFAFRVSLQFVETQPVEALGKEIISWRDESFHNYNAHSQDSSPISSL 413
+ FRV ++Q KE + +D +DS+ L
Sbjct: 312 QLPQ----------HTFRVIWTGSDSQ------KECVLLKDRP----ECWCRDSATDEQL 351
Query: 414 YQLSIKNDNELTDFEWRAATIAKEIDHFRELLSL-INCKIGKLTLARLLMAHDAMMCPPA 472
++ + + ++ + E++ +EL L K LT+ L+ A D ++
Sbjct: 352 FRCELSVE--------KSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLL---- 399
Query: 473 NKISHSEEVLELYNDLMRLDPTHVQYYKDQHSLVLLQQVTSNWESLLSRCFHYSNSPSNR 532
+ +E L+ ++ L +DP Y D S LL+ E R H ++
Sbjct: 400 ----YEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHK---- 451
Query: 533 GSPMCLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSI-EGLEALQLLSCLNLSNNILGS 591
L+ L ++LL V LDLSHN LR++ L AL+ L L S+N L +
Sbjct: 452 -----------DLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN 500
Query: 592 FTALEPIRQLKSLRALNISYNEIGA 616
+ + +L+ L N + A
Sbjct: 501 VDGVANLPRLQELLLCNNRLQQSAA 525
>sp|Q9JHK4|PGTA_MOUSE Geranylgeranyl transferase type-2 subunit alpha OS=Mus musculus
GN=Rabggta PE=1 SV=1
Length = 567
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 181/617 (29%), Positives = 268/617 (43%), Gaps = 109/617 (17%)
Query: 1 MHGRPRKPLKPEDAAASAAKAE-KLRVLQSQ---FLHNHHNHIYSKEAVELSTKLLETNP 56
MHGR + E A A + E KL++ QS + +EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKREAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+LS
Sbjct: 61 DFATLWNCRREVLQQ--LETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F +AD RNFH W+YRRFVAA + +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHNRSLLLSNLLKRKVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233
S+WH RS LL L + G + E VL E E V A FTDP+DQS WFYH WLL +
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLRELELVQNAFFTDPNDQSAWFYHRWLLGR 238
Query: 234 TVRVDSPQLVSSWPTPGSDLILLGDRCLDGCASSPFTRFHLDSRTFPLVLYFNQAVEGVN 293
P L L + C S F+R PL++ +
Sbjct: 239 A-------------EPHDVLCCLHVSREEACLSVCFSR--------PLIVG-----SKMG 272
Query: 294 SSTITVDSELNTNKDLVWKPLSSCNSKAAQVWVTQLNLPDGNTHSSKVFPVEVSLGHSQG 353
+ +TVD PLS W T PDG S V+ ++
Sbjct: 273 TLLLTVDE----------APLSV-------EWRT----PDGRNRPSHVWLCDLP------ 305
Query: 354 IISSSGFHYSNPFCFAFRVSLQFVETQPVEALGKEIISWRDESFHNYNAHSQDSSPISSL 413
+S H FRV +TQ KE + + + +DS+ L
Sbjct: 306 -AASLNDHLPQ---HTFRVIWTGSDTQ------KECVLLKG----HQECWCRDSATDEQL 351
Query: 414 YQLSIKNDNELTDFEWRAATIAKEIDHFRELLSL-INCKIGKLTLARLLMAHDAMMCPPA 472
++ + + ++ + E++ +EL L K LT+ L+ A D ++
Sbjct: 352 FRCELSVE--------KSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLL---- 399
Query: 473 NKISHSEEVLELYNDLMRLDPTHVQYYKDQHSLVLLQQVTSNWESLLSRCFHYSNSPSNR 532
+ +E LE ++ L +DP Y D S L++ E R H ++
Sbjct: 400 ----YEKETLEYFSTLKAVDPMRAAYLDDLRSKFLVENSVLKMEYADVRVLHLAHK---- 451
Query: 533 GSPMCLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSI-EGLEALQLLSCLNLSNNILGS 591
L+ L ++LL V LDLSHN LR++ L AL+ L L S+N+L +
Sbjct: 452 -----------DLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNVLEN 500
Query: 592 FTALEPIRQLKSLRALN 608
+ + +L+ L N
Sbjct: 501 LDGVANLPRLRELLLCN 517
>sp|Q5NVK5|PGTA_PONAB Geranylgeranyl transferase type-2 subunit alpha OS=Pongo abelii
GN=RABGGTA PE=2 SV=1
Length = 567
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 178/622 (28%), Positives = 262/622 (42%), Gaps = 119/622 (19%)
Query: 1 MHGRPRKPLKPEDAAASAAKAE-KLRVLQSQ---FLHNHHNHIYSKEAVELSTKLLETNP 56
MHGR + E A A + E KL++ QS + +EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+L
Sbjct: 61 DFATLWNCRREVLQQ--LETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLG 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVA +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHNRSLLLSNLLKRKVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233
S+WH RS LL L + G + E VL E E V A FTDP+DQS WFYH WLL
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLG- 237
Query: 234 TVRVDSPQLVSSWPTPGSDLILLGDRCL-----DGCASSPFTR-FHLDSRTFPLVLYFNQ 287
R D P L RCL + C + F+R + SRT L+L
Sbjct: 238 --RAD----------PQDAL-----RCLHVSREEACLTVSFSRPLLVGSRTEILLLM--- 277
Query: 288 AVEGVNSSTITVDSELNTNKDLVWKPLSSCNSKAAQVWVTQLNLPDGNTHSSKVFPVEVS 347
V+ S + V+ W+ N + + VW+ L N +
Sbjct: 278 ----VDDSPLIVE----------WRTPDGRN-RPSHVWLCDLPAASLNDQLPQ------- 315
Query: 348 LGHSQGIISSSGFHYSNPFCFAFRVSLQFVETQPVEALGKEIISWRDESFHNYNAHSQDS 407
H+ +I ++G V+ + V G++ RD + + S
Sbjct: 316 --HTFRVIWTAG----------------DVQKECVLLKGRQEGWCRDSTTDEQLFRCELS 357
Query: 408 SPISSLYQLSIKNDNELTDFEWRAATIAKEIDHFRELLSLINCKIGKLTLARLLMAHDAM 467
S++ Q +++ EL + E K LT+ L+ A D +
Sbjct: 358 VEKSTVLQSELESCKELQELE-------------------PENKWCLLTIILLMRALDPL 398
Query: 468 MCPPANKISHSEEVLELYNDLMRLDPTHVQYYKDQHSLVLLQQVTSNWESLLSRCFHYSN 527
+ + +E L + L +DP Y D S LL+ E R H ++
Sbjct: 399 L--------YEKETLRYFQTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYAEVRVLHLAH 450
Query: 528 SPSNRGSPMCLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSI-EGLEALQLLSCLNLSN 586
L+ L ++LL V LDLSHN LR++ L AL+ L L S+
Sbjct: 451 K---------------DLTVLCHLEQLLLVTHLDLSHNRLRTLPPALAALRCLEVLQASD 495
Query: 587 NILGSFTALEPIRQLKSLRALN 608
N + S + + +L+ L N
Sbjct: 496 NAIESLDGVTNLPRLQELLLCN 517
>sp|A5A779|PGTA_PIG Geranylgeranyl transferase type-2 subunit alpha OS=Sus scrofa
GN=RABGGTA PE=2 SV=1
Length = 567
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 182/658 (27%), Positives = 279/658 (42%), Gaps = 131/658 (19%)
Query: 1 MHGRPRKPLKPEDAAASAAKAE-KLRVLQSQ---FLHNHHNHIYSKEAVELSTKLLETNP 56
MHGR + E A A + E KL++ Q+ + +EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQTATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+L
Sbjct: 61 DFATLWNCRREVLQR--LEVQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLG 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVA+ +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEVDERNFHCWDYRRFVASQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHNRSLLLSNLLKRKVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233
S+WH RS LL L + G + E VL E E V A FTDP+DQS WFYH WLL
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLG- 237
Query: 234 TVRVDSPQLVSSWPTPGSDLILLGDRCL-----DGCASSPFTRFHLDSRTFPLVLYFNQA 288
R D P L RCL + C + F+R L + +L
Sbjct: 238 --RAD----------PQDAL-----RCLHVSRDEACLTVSFSRPLLVGPSTETLLLM--- 277
Query: 289 VEGVNSSTITVDSELNTNKDLVWKPLSSCNSKAAQVWVTQLNLPDGNTHSSKVFPVEVSL 348
VN S ++V+ W+ N + + VW+ L N H +
Sbjct: 278 ---VNESPLSVE----------WRTPDGRN-RPSHVWLCDLPAASLNDHLPQ-------- 315
Query: 349 GHSQGIISSSGFHYSNPFCFAFRVSLQFVETQPVEALGKEIISWRDESFHNYNAHSQDSS 408
H+ +I ++G + C ++ R E + +DS+
Sbjct: 316 -HTFRVIWTAG--NAQKECV--------------------LLKGRQEGW------CRDSA 346
Query: 409 PISSLYQLSIKNDNELTDFEWRAATIAKEIDHFRELLSL-INCKIGKLTLARLLMAHDAM 467
L++ + + ++ + E++ +EL L K LT+ L+ A D +
Sbjct: 347 TDEQLFRCELSVE--------KSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPL 398
Query: 468 MCPPANKISHSEEVLELYNDLMRLDPTHVQYYKDQHSLVLLQQVTSNWESLLSRCFHYSN 527
+ + +E L+ + L +DP Y D S LL+ E R H
Sbjct: 399 L--------YEKETLQYFQTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLH--- 447
Query: 528 SPSNRGSPMCLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSI-EGLEALQLLSCLNLSN 586
L + L+ L ++LL V LDLSHN LR++ L AL+ L L ++
Sbjct: 448 ------------LGHKDLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQAND 495
Query: 587 NILGSFTALEPIRQLKSLRALNISYNEIGAHSIDTTKYLCS---------SPLSHSVG 635
N + S L+ + L L+ L++ N + ++ C +PL +VG
Sbjct: 496 NAIES---LDGVTNLPRLQELSLCNNRLQQPAVLQPLASCPRLVLLNLQDNPLCQAVG 550
>sp|Q92696|PGTA_HUMAN Geranylgeranyl transferase type-2 subunit alpha OS=Homo sapiens
GN=RABGGTA PE=1 SV=2
Length = 567
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 130/241 (53%), Gaps = 9/241 (3%)
Query: 1 MHGRPRKPLKPEDAAASAAKAE-KLRVLQSQ---FLHNHHNHIYSKEAVELSTKLLETNP 56
MHGR + E A A + E KL++ QS + +EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+L
Sbjct: 61 DFATLWNCRREVLQQ--LETQKSPEELAALVKAELGFLESCLRVNPKSYGTWHHRCWLLG 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVA +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHNRSLLLSNLLKRKVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233
S+WH RS LL L + G + E VL E E V A FTDP+DQS WFYH WLL +
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGR 238
Query: 234 T 234
Sbjct: 239 A 239
Score = 40.4 bits (93), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 47/209 (22%)
Query: 430 RAATIAKEIDHFRELLSL-INCKIGKLTLARLLMAHDAMMCPPANKISHSEEVLELYNDL 488
++ + E++ +EL L K LT+ L+ A D ++ + +E L+ + L
Sbjct: 360 KSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLL--------YEKETLQYFQTL 411
Query: 489 MRLDPTHVQYYKDQHSLVLLQQVTSNWESLLSRCFHYSNSPSNRGSPMCLQLKNLSLSRL 548
+DP Y D S LL+ E R H ++ L+ L
Sbjct: 412 KAVDPMRATYLDDLRSKFLLENSVLKMEYAEVRVLHLAHK---------------DLTVL 456
Query: 549 GSFDKLLWVQMLDLSHNELR-----------------------SIEGLEALQLLSCLNLS 585
++LL V LDLSHN LR S++G+ L L L L
Sbjct: 457 CHLEQLLLVTHLDLSHNRLRTLPPALAALRCLEVLQASDNAIESLDGVTNLPRLQELLLC 516
Query: 586 NNILGSFTALEPIRQLKSLRALNISYNEI 614
NN L L+P+ L LN+ N +
Sbjct: 517 NNRLQQPAVLQPLASCPRLVLLNLQGNPL 545
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 39 IYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSL--KSILDEELRVVES 96
+ E + + L+ N Y++W+YR + + DS P + +L +EL +V++
Sbjct: 158 VPPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQN 217
Query: 97 ALRQNFKSYGAWHHRKWILSKGHSSIDNELRLL 129
A + AW + +W+L G + + LR L
Sbjct: 218 AFFTDPNDQSAWFYHRWLL--GRADPQDALRCL 248
>sp|Q5EA80|PGTA_BOVIN Geranylgeranyl transferase type-2 subunit alpha OS=Bos taurus
GN=RABGGTA PE=2 SV=1
Length = 567
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/241 (40%), Positives = 132/241 (54%), Gaps = 9/241 (3%)
Query: 1 MHGRPRKPLKPEDAAASAAKAE-KLRVLQSQ---FLHNHHNHIYSKEAVELSTKLLETNP 56
MHGR + E A A + E KL++ Q+ + +EL++++L NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQAATQTVFQKRQAGELDESVLELTSQILGANP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
+ T WN R+ +Q E P+ L +++ EL +ES LR N KSYG WHHR W+LS
Sbjct: 61 DFATLWNCRREVLQQ--LEVQKSPEELATLVKAELGFLESCLRVNPKSYGTWHHRCWLLS 118
Query: 117 K-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNY 175
+ + EL L +F + D RNFH W+YRRFVAA +EL +T+ +I NFSNY
Sbjct: 119 RLPEPNWARELELCARFLEVDERNFHCWDYRRFVAAQAAVPPAEELAFTDSLITRNFSNY 178
Query: 176 SAWHNRSLLLSNLLKRKVEGFVSK--EKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233
S+WH RS LL L + G + E VL E E V A FTDP+DQS WFYH WLL +
Sbjct: 179 SSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFTDPNDQSAWFYHRWLLGR 238
Query: 234 T 234
Sbjct: 239 A 239
Score = 40.0 bits (92), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 60/165 (36%), Gaps = 38/165 (23%)
Query: 473 NKISHSEEVLELYNDLMRLDPTHVQYYKDQHSLVLLQQVTSNWESLLSRCFHYSNSPSNR 532
+ + + +E L+ + L +DP Y D S LL+ E R H +
Sbjct: 396 DPLQYEKETLQYFQTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYAEVRVLHLGHK---- 451
Query: 533 GSPMCLQLKNLSLSRLGSFDKLLWVQMLDLSHNELR-----------------------S 569
L+ L ++LL V LDLSHN LR S
Sbjct: 452 -----------DLTVLCHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQANDNAIES 500
Query: 570 IEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSLRALNISYNEI 614
++G+ L L L L NN L L+P+ L LN+ N +
Sbjct: 501 LDGVTNLPRLQELILCNNRLQQPAVLQPLTSCPRLTLLNLQGNPL 545
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 43 EAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSL--KSILDEELRVVESALRQ 100
E + + L+ N Y++W+YR + + DS P + +L +EL +V++A
Sbjct: 162 EELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAFFT 221
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLL 129
+ AW + +W+L G + + LR L
Sbjct: 222 DPNDQSAWFYHRWLL--GRADPQDALRCL 248
>sp|O94412|PGTA_SCHPO Geranylgeranyl transferase type-2 subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=bet4 PE=3 SV=1
Length = 344
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 139/248 (56%), Gaps = 22/248 (8%)
Query: 1 MHGRPRKPLKPED----AAASAAKAEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNP 56
MHG R L E A AK E+ R L S+F YS+ ++L+T+LL+ NP
Sbjct: 1 MHGILRVKLSEEQRKLKAEKERAKIEEYRGLVSRFQEARKRKDYSEGNLKLTTELLDWNP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDP----DSLKSILDEELRVVESALRQNFKSYGAWHHRK 112
E Y+ WNYR+ ++ ND P + + +LD EL+ V S ++ K Y ++HR+
Sbjct: 61 ETYSVWNYRR-----EILLNDVFPKISLNEKQDLLDNELKYVLSKMKVFPKVYWIFNHRR 115
Query: 113 WILSKG-HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRS-----EEDELKYTED 166
W L + + + E+ + +K AD+RNFH W+YRR+V + + R+ + E++YT
Sbjct: 116 WCLENAPYPNWNYEMMITEKLLSADARNFHGWHYRRYVVSQIERAGNCSLAKKEMEYTTS 175
Query: 167 MICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSK---EKVLPDEYEFVHQAIFTDPDDQSG 223
I NFSN+SA HNR+ L+ +L + + K +++L E + +HQA+FTDPDD S
Sbjct: 176 AIATNFSNFSALHNRTKLIETILNLEADPNSQKALAKQILEQELDMIHQAVFTDPDDSSV 235
Query: 224 WFYHLWLL 231
W YH WL+
Sbjct: 236 WIYHRWLM 243
>sp|Q55DQ4|PGTA_DICDI Geranylgeranyl transferase type-2 subunit alpha OS=Dictyostelium
discoideum GN=rabggta PE=3 SV=2
Length = 311
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 133/240 (55%), Gaps = 17/240 (7%)
Query: 1 MHGRPRKPLKPEDAAASAAKAEKLRVLQS--------QFLHNHHNHIYSKEAVELSTKLL 52
MHG + ++ + A A + ++L ++S + L N Y + ++ +S +L
Sbjct: 1 MHGVLK--VRTSEEKAKAQRLKELEKIESYNKLVKSFEELREKQNGRYDEISLSVSKLVL 58
Query: 53 ETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRK 112
NPE YT WNYR+LA+ + TE + + L+ I E++ +E +++ KSY W HR+
Sbjct: 59 IENPEFYTIWNYRRLAIL-QFTETKENSE-LQVIYQNEMKFLEECIQRFTKSYWIWFHRQ 116
Query: 113 WI-LSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNN 171
WI L + + E++L K D RNFH W +RRF+ N EDELKYT + + N
Sbjct: 117 WIALRMDNCDWEREMKLCTKLLNFDLRNFHCWGHRRFILKHSNIKLEDELKYTTEKVEQN 176
Query: 172 FSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
FSNYSAWH RS +L + K + EK+L +E+E V A++T+P D S W YH WL+
Sbjct: 177 FSNYSAWHQRSSILPKIYKEPEQLL---EKIL-EEFELVRNAVYTEPKDSSSWIYHKWLV 232
>sp|Q00618|PGTA_YEAST Geranylgeranyl transferase type-2 subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=BET4 PE=1
SV=3
Length = 327
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 128/248 (51%), Gaps = 21/248 (8%)
Query: 1 MHGRPRKPLKPEDAAASAAKAEK----LRVLQSQFLHNHHNHIYSKEAVELSTKLLETNP 56
MHG RK E + EK R L L+ IYS EA++ +++LLE NP
Sbjct: 1 MHGIKRKQWTKELLRQKRVQDEKKIYDYRSLTENVLNMRDEKIYSIEALKKTSELLEKNP 60
Query: 57 ELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
E WNYR+ + +E + D+EL V L+ K Y W+HR W+L
Sbjct: 61 EFNAIWNYRRDIIASLASELEI------PFWDKELVFVMMLLKDYPKVYWIWNHRLWVLK 114
Query: 117 KGHSS----IDNELRLLDKFQKADSRNFHAWNYRRFVAASM----NRS-EEDELKYTEDM 167
+S EL +++K + D+RN+H W+YRR V ++ N+S +++E +YT
Sbjct: 115 HYPTSSPKVWQTELAVVNKLLEQDARNYHGWHYRRIVVGNIESITNKSLDKEEFEYTTIK 174
Query: 168 ICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYH 227
I NN SNYSAWH R ++S + ++ G ++++ + E ++ A+FTD +DQS WFY
Sbjct: 175 INNNISNYSAWHQRVQIISRMFQKGEVG--NQKEYIRTEISYIINAMFTDAEDQSVWFYI 232
Query: 228 LWLLDQTV 235
W + +
Sbjct: 233 KWFIKNDI 240
>sp|O93829|PGTA_CANAX Geranylgeranyl transferase type-2 subunit alpha OS=Candida albicans
GN=BET4 PE=3 SV=1
Length = 371
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 39/269 (14%)
Query: 2 HGRPRKPLKPE----DAAASAAKAEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPE 57
HG R L E K + R L + N YS EA+ + +LL NPE
Sbjct: 3 HGIKRVKLSEEAKRLKLEKDQIKIKNYRQLTDEIFELRANENYSDEALIKTNELLIINPE 62
Query: 58 LYTAWNYRK-LAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILS 116
YT WNYR+ + + + + ND D + IL+++L V L++ K Y W+HR+W+L
Sbjct: 63 FYTIWNYRREILINNYSSSNDKDDQIYEDILNQDLNFVLVQLKKFPKCYWIWNHRRWLLF 122
Query: 117 K----GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMN-----------RSEEDEL 161
+ G + E ++ K D RNFH W+YRRFV +M + DE
Sbjct: 123 ELVKLGKVNWKYEFGVVSKLLDLDQRNFHGWHYRRFVVKNMELECKNDTTLILKINLDEF 182
Query: 162 KYTEDMICNNFSNYSAWHNRSLLLS---NLLKRK----------------VEGFVSKEKV 202
YT I +FSN+SAWHNR+ L+ NL++++ +E F + +
Sbjct: 183 NYTTLKIQKDFSNFSAWHNRTKLIPKIYNLIQQQQQQQQKDGKIFGDLPGIELFQNPILL 242
Query: 203 LPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
L ++ E + ++ P+D S W Y WLL
Sbjct: 243 LKNDLEMIKTGVYMSPEDTSVWLYLYWLL 271
>sp|P93227|FNTA_SOLLC Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Solanum lycopersicum GN=FTA PE=2 SV=1
Length = 346
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 102/187 (54%), Gaps = 18/187 (9%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S A++L+ + ++ NP YT W +R++ ++ +L L EEL+ V+ +
Sbjct: 60 STRALQLTGEAIQLNPGNYTVWQFRRVVLE-----------ALGVDLREELKFVDRIAGE 108
Query: 101 NFKSYGAWHHRKWILSK-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEED 159
N K+Y WHHR+W+ K G ++ NEL K D++N+HAW++R++V ++ ED
Sbjct: 109 NTKNYQIWHHRRWLAEKLGADAVTNELEFTKKIFSQDAKNYHAWSHRQWVLQALG-GWED 167
Query: 160 ELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD 219
EL Y + ++ ++ N SAW+ R +++ + G V+ ++ E + QAI P+
Sbjct: 168 ELAYCQQLLEDDIYNNSAWNQRYFVVTR--SPLLGGLVAMREL---EVNYTVQAIRASPE 222
Query: 220 DQSGWFY 226
++S W Y
Sbjct: 223 NESPWRY 229
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 10/93 (10%)
Query: 139 NFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVS 198
N+ W +RR V ++ +ELK+ + + N NY WH+R L L
Sbjct: 77 NYTVWQFRRVVLEALGVDLREELKFVDRIAGENTKNYQIWHHRRWLAEKL---------- 126
Query: 199 KEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
+ +E EF + D + W + W+L
Sbjct: 127 GADAVTNELEFTKKIFSQDAKNYHAWSHRQWVL 159
>sp|O24304|FNTA_PEA Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Pisum sativum GN=FTA PE=2 SV=1
Length = 333
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 18/187 (9%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S A+ L+ + + N YT W++R+L ++ SLK L E VE
Sbjct: 62 SSRALALTAEAIGLNAGNYTVWHFRRLLLE-----------SLKVDLHVEREFVERVASG 110
Query: 101 NFKSYGAWHHRKWILSK-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEED 159
N K+Y WHHR+W+ K G + ++EL K D++++HAW++R++V ++ ED
Sbjct: 111 NSKNYQIWHHRRWVAEKLGPEARNSELEFTKKILSVDAKHYHAWSHRQWVLQNLG-GWED 169
Query: 160 ELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD 219
EL Y +++ + N SAW+ R +++ + V G + + E F +AI + P+
Sbjct: 170 ELSYCSELLAEDIFNNSAWNQRYFVIT---RSPVLGGLKAMR--ESEVLFTVEAIISYPE 224
Query: 220 DQSGWFY 226
++S W Y
Sbjct: 225 NESSWRY 231
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 84 KSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAW 143
K + L + A+ N +Y WH R+ +L + E +++ +S+N+ W
Sbjct: 59 KELSSRALALTAEAIGLNAGNYTVWHFRRLLLESLKVDLHVEREFVERVASGNSKNYQIW 118
Query: 144 NYRRFVAASMN-RSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNL 188
++RR+VA + + EL++T+ ++ + +Y AW +R +L NL
Sbjct: 119 HHRRWVAEKLGPEARNSELEFTKKILSVDAKHYHAWSHRQWVLQNL 164
>sp|O60052|FNTA_SCHPO Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cwp1 PE=1 SV=1
Length = 294
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 26/198 (13%)
Query: 40 YSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALR 99
YS A+ L+ L+ NP YT W YR + H S +D EL ++
Sbjct: 57 YSLRALNLTGFLIMNNPAHYTVWAYRFQILNHT-----------PSYIDNELEWLDEIAE 105
Query: 100 QNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEED 159
K+Y WHHR+ ILS + + EL K + DS+N+H W+YR ++ + N +
Sbjct: 106 DFQKNYQVWHHRQKILSLT-KNYERELEFTKKMFEIDSKNYHVWSYRVWILQNFNDYSQ- 163
Query: 160 ELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKV---LPDEYEFVHQAIFT 216
ELK T +++ + N SAW++R +L F + + V L +E ++ I
Sbjct: 164 ELKLTNELLEKDIYNNSAWNHRFYVL----------FETSKVVSWSLEEELNYLKDKILF 213
Query: 217 DPDDQSGWFYHLWLLDQT 234
PD+QS W Y +LD++
Sbjct: 214 APDNQSAWNYLCGVLDKS 231
>sp|P29703|FNTA_YEAST Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAM2 PE=1 SV=1
Length = 316
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 12/187 (6%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S A++L+ ++++ P YT WNYR V+H ++E++ D++ L++EL ++
Sbjct: 48 SPRALQLTAEIIDVAPAFYTIWNYRFNIVRHMMSESE---DTV-LYLNKELDWLDEVTLN 103
Query: 101 NFKSYGAWHHRKWILSKGHS-SIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEED 159
N K+Y W +R+ +L S S EL +L DS+N+H W+YR++ + +
Sbjct: 104 NPKNYQIWSYRQSLLKLHPSPSFKRELPILKLMIDDDSKNYHVWSYRKWCCLFFSDFQH- 162
Query: 160 ELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD 219
EL Y D+I + N SAW +R N + +SK + L DE +F+ I P
Sbjct: 163 ELAYASDLIETDIYNNSAWTHRMFYWVN-----AKDVISKVE-LADELQFIMDKIQLVPQ 216
Query: 220 DQSGWFY 226
+ S W Y
Sbjct: 217 NISPWTY 223
>sp|Q61239|FNTA_MOUSE Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Mus musculus GN=Fnta PE=1 SV=1
Length = 377
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 21 AEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDP 80
+EK R + F S+ A +L+ +E N YT W++R++ ++
Sbjct: 93 SEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR---------- 142
Query: 81 DSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNF 140
SL+ L EE+ + + + + K+Y WHHR+ +L + EL + D++N+
Sbjct: 143 -SLQKDLQEEMNYITAIIEEQPKNYQVWHHRR-VLVEWLKDPSQELEFIADILSQDAKNY 200
Query: 141 HAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKE 200
HAW +R++V R ++EL+Y + ++ + N S W+ R ++SN G+ S
Sbjct: 201 HAWQHRQWVIQEF-RLWDNELQYVDQLLKEDVRNNSVWNQRHFVISN-----TTGY-SDR 253
Query: 201 KVLPDEYEFVHQAIFTDPDDQSGWFY 226
VL E ++ + I P ++S W Y
Sbjct: 254 AVLEREVQYTLEMIKLVPHNESAWNY 279
Score = 40.4 bits (93), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 139 NFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVS 198
N+ W++RR + S+ + ++E+ Y +I NY WH+R +L+ L
Sbjct: 130 NYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRRVLVEWL---------- 179
Query: 199 KEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233
K E EF+ + D + W + W++ +
Sbjct: 180 --KDPSQELEFIADILSQDAKNYHAWQHRQWVIQE 212
>sp|Q04631|FNTA_RAT Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Rattus norvegicus GN=Fnta PE=1 SV=1
Length = 377
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 21 AEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDP 80
+EK R + F S+ A +L+ +E N YT W++R++ ++
Sbjct: 93 SEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR---------- 142
Query: 81 DSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNF 140
SL+ L EE+ + + + + K+Y WHHR+ +L + EL + D++N+
Sbjct: 143 -SLQKDLQEEMNYIIAIIEEQPKNYQVWHHRR-VLVEWLKDPSQELEFIADILNQDAKNY 200
Query: 141 HAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKE 200
HAW +R++V R ++EL+Y + ++ + N S W+ R ++SN G+ S
Sbjct: 201 HAWQHRQWVIQEF-RLWDNELQYVDQLLKEDVRNNSVWNQRHFVISN-----TTGY-SDR 253
Query: 201 KVLPDEYEFVHQAIFTDPDDQSGWFY 226
VL E ++ + I P ++S W Y
Sbjct: 254 AVLEREVQYTLEMIKLVPHNESAWNY 279
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 139 NFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVS 198
N+ W++RR + S+ + ++E+ Y +I NY WH+R +L+ L
Sbjct: 130 NYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWL---------- 179
Query: 199 KEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLDQ 233
K E EF+ + D + W + W++ +
Sbjct: 180 --KDPSQELEFIADILNQDAKNYHAWQHRQWVIQE 212
>sp|Q9LX33|FNTA_ARATH Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Arabidopsis thaliana GN=FTA PE=1 SV=2
Length = 326
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 8 PLKPEDA---AASAAKAEKLRVLQSQFLHNHHNHIYSKEAVELSTKLLETNPELYTAWNY 64
PL +D A E+ R F + + S A+ L+ + L N YT W++
Sbjct: 20 PLTQDDGPNPVVPIAYKEEFRETMDYFRAIYFSDERSPRALRLTEETLLLNSGNYTVWHF 79
Query: 65 RKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSK-GHSSID 123
R+L ++ +L L EEL +E N K+Y WHHR+W+ K G
Sbjct: 80 RRLVLE-----------ALNHDLFEELEFIERIAEDNSKNYQLWHHRRWVAEKLGPDVAG 128
Query: 124 NELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAWHNRSL 183
EL + D++++HAW++R++ ++ EDEL Y +++ + N SAW+ R
Sbjct: 129 RELEFTRRVLSLDAKHYHAWSHRQWTLRALG-GWEDELDYCHELLEADVFNNSAWNQRYY 187
Query: 184 LLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFY 226
+++ + + G + E + E + +AI T+P ++S W Y
Sbjct: 188 VIT---QSPLLGGL--EAMRESEVSYTIKAILTNPANESSWRY 225
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEED- 159
N +Y WH R+ +L + + EL +++ + +S+N+ W++RR+VA +
Sbjct: 70 NSGNYTVWHFRRLVLEALNHDLFEELEFIERIAEDNSKNYQLWHHRRWVAEKLGPDVAGR 129
Query: 160 ELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPD 219
EL++T ++ + +Y AW +R L R + G+ DE ++ H+ + D
Sbjct: 130 ELEFTRRVLSLDAKHYHAWSHRQWTL-----RALGGW-------EDELDYCHELLEADVF 177
Query: 220 DQSGWFYHLWLLDQT 234
+ S W +++ Q+
Sbjct: 178 NNSAWNQRYYVITQS 192
>sp|P49354|FNTA_HUMAN Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Homo sapiens GN=FNTA PE=1 SV=1
Length = 379
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 93/186 (50%), Gaps = 19/186 (10%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A +L+ +E N YT W++R++ ++ SL+ L EE+ + + + +
Sbjct: 113 SERAFKLTRDAIELNAANYTVWHFRRVLLK-----------SLQKDLHEEMNYITAIIEE 161
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160
K+Y WHHR+ +L + EL + D++N+HAW +R++V + ++E
Sbjct: 162 QPKNYQVWHHRR-VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF-KLWDNE 219
Query: 161 LKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220
L+Y + ++ + N S W+ R ++SN G+ + VL E ++ + I P +
Sbjct: 220 LQYVDQLLKEDVRNNSVWNQRYFVISN-----TTGY-NDRAVLEREVQYTLEMIKLVPHN 273
Query: 221 QSGWFY 226
+S W Y
Sbjct: 274 ESAWNY 279
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Query: 91 LRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVA 150
++ A+ N +Y WH R+ +L + E+ + + +N+ W++RR +
Sbjct: 117 FKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLV 176
Query: 151 ASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFV 210
+ R EL++ D++ + NY AW +R ++ K+ +E ++V
Sbjct: 177 EWL-RDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF------------KLWDNELQYV 223
Query: 211 HQAIFTDPDDQSGWFYHLWLLDQTV 235
Q + D + S W +++ T
Sbjct: 224 DQLLKEDVRNNSVWNQRYFVISNTT 248
>sp|P29702|FNTA_BOVIN Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Bos taurus GN=FNTA PE=2 SV=2
Length = 375
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 93/186 (50%), Gaps = 19/186 (10%)
Query: 41 SKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQ 100
S+ A +L+ +E N YT W++R++ ++ SL+ L EE+ + + + +
Sbjct: 109 SERAFKLTRDAIELNAANYTVWHFRRVLLK-----------SLQKDLHEEMNYISAIIEE 157
Query: 101 NFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDE 160
K+Y WHHR+ +L + EL + D++N+HAW +R++V + ++E
Sbjct: 158 QPKNYQVWHHRR-VLVEWLRDPSQELEFIADILTQDAKNYHAWQHRQWVIQEF-KLWDNE 215
Query: 161 LKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDD 220
L+Y + ++ + N S W+ R ++SN G+ + +L E ++ + I P +
Sbjct: 216 LQYVDQLLKEDVRNNSVWNQRYFVISN-----TTGY-NDRAILEREVQYTLEMIKLVPHN 269
Query: 221 QSGWFY 226
+S W Y
Sbjct: 270 ESAWNY 275
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Query: 91 LRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVA 150
++ A+ N +Y WH R+ +L + E+ + + +N+ W++RR +
Sbjct: 113 FKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYISAIIEEQPKNYQVWHHRRVLV 172
Query: 151 ASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFV 210
+ R EL++ D++ + NY AW +R ++ K+ +E ++V
Sbjct: 173 EWL-RDPSQELEFIADILTQDAKNYHAWQHRQWVIQEF------------KLWDNELQYV 219
Query: 211 HQAIFTDPDDQSGWFYHLWLLDQTV 235
Q + D + S W +++ T
Sbjct: 220 DQLLKEDVRNNSVWNQRYFVISNTT 244
>sp|Q54RT9|FNTA_DICDI Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Dictyostelium discoideum GN=fntA PE=3
SV=1
Length = 322
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 7 KPLKPEDAAASAAKAEKLRVLQSQFLHNHHNH----IYSKE----AVELSTKLLETNPEL 58
KPL +D +L S+ + N+ + SKE ++L ++++ NP
Sbjct: 23 KPLAQDDGPHPICP-----ILYSEVFKDKMNYFRAILKSKEKSLRVLDLLEEVIQENPSN 77
Query: 59 YTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWILSKG 118
YT W YR+ + K E D ++++ + +E+ ++ + K+Y W+HR++I+ K
Sbjct: 78 YTIWYYRREVL--KAIEQD---ETIEYDIQQEMNLLNDMGETDPKNYQIWNHRRFIVEKY 132
Query: 119 HSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELKYTEDMICNNFSNYSAW 178
S + E L D++N+HAW++R+++ + R EL + ++ + N S W
Sbjct: 133 IGSDNKEKEFLSGVLLEDAKNYHAWSHRQWLLKTY-RDWNGELAMVDKLLSLDHRNNSVW 191
Query: 179 HNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFY 226
++R ++SNL ++ E EF I P+++S W Y
Sbjct: 192 NHRFFVISNLNPSPFPL-----SLIEREVEFAFNHIRHSPNNESPWSY 234
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 126 LRLLDKFQKADSRNFHAWNYRRFVAASMNRSE------EDELKYTEDMICNNFSNYSAWH 179
L LL++ + + N+ W YRR V ++ + E + E+ DM + NY W+
Sbjct: 64 LDLLEEVIQENPSNYTIWYYRREVLKAIEQDETIEYDIQQEMNLLNDMGETDPKNYQIWN 123
Query: 180 NRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
+R ++ K G +KEK EF+ + D + W + WLL
Sbjct: 124 HRRFIV-----EKYIGSDNKEK------EFLSGVLLEDAKNYHAWSHRQWLL 164
>sp|Q9Y765|FNTA_CANAX Protein farnesyltransferase/geranylgeranyltransferase type-1
subunit alpha OS=Candida albicans GN=RAM2 PE=1 SV=1
Length = 306
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 55 NPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHHRKWI 114
N + Y WNYR+L + + N++D D + E ++E+ L + K++ W +RKW+
Sbjct: 99 NEKNYQIWNYRQLIIGQIMELNNNDFDPYR-----EFPILEAMLSSDPKNHHVWSYRKWL 153
Query: 115 LSKGHSSID-NELRLLDKFQKADSRNFHAWNYRRFVAAS-----MNRSEEDELKYTEDMI 168
+ D EL +DK D +N AW++R F+ S + + ++EL Y +D I
Sbjct: 154 VDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKI 213
Query: 169 CNNFSNYSAWH 179
N S W+
Sbjct: 214 VKCPQNPSTWN 224
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 23/196 (11%)
Query: 40 YSKEAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALR 99
YS+ A+ ++ + YT W YR +++ N L +EL E
Sbjct: 48 YSERALHITELGINELASHYTIWIYRFNILKNLPNRN----------LYDELDWCEEIAL 97
Query: 100 QNFKSYGAWHHRKWILSKGHSSIDN------ELRLLDKFQKADSRNFHAWNYRRFVAASM 153
N K+Y W++R+ I+ + +N E +L+ +D +N H W+YR+++ +
Sbjct: 98 DNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFPILEAMLSSDPKNHHVWSYRKWLVDTF 157
Query: 154 N-RSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQ 212
+ ++ EL + + +I + N SAW +R LL + + ++ + + +E +V
Sbjct: 158 DLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS------KKHLATDNTIDEELNYVKD 211
Query: 213 AIFTDPDDQSGWFYHL 228
I P + S W Y L
Sbjct: 212 KIVKCPQNPSTWNYLL 227
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 140 FHAWNYRRFVAASM-NRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVS 198
+ W YR + ++ NR+ DEL + E++ +N NY W+ R L++ +++ F
Sbjct: 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDP 126
Query: 199 KEKVLPDEYEFVHQAIFTDPDDQSGWFYHLWLLD 232
E+ + + +DP + W Y WL+D
Sbjct: 127 YR-----EFPILEAMLSSDPKNHHVWSYRKWLVD 155
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 24/136 (17%)
Query: 51 LLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNFKSYGAWHH 110
+L ++P+ + W+YRK V ND+ +EL V+ + + K+ AW H
Sbjct: 136 MLSSDPKNHHVWSYRKWLVDTFDLHNDA----------KELSFVDKVIDTDLKNNSAWSH 185
Query: 111 RKWIL-SKGH----SSIDNELRLL-DKFQKADSRNFHAWNYRRFVAASMNRS----EEDE 160
R ++L SK H ++ID EL + DK K +N WNY + +RS EE
Sbjct: 186 RFFLLFSKKHLATDNTIDEELNYVKDKIVKC-PQNPSTWNYLLGIHERFDRSITQLEEFS 244
Query: 161 LKYTE---DMICNNFS 173
L++ + D + ++F+
Sbjct: 245 LQFVDLEKDQVTSSFA 260
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 17/148 (11%)
Query: 91 LRVVESALRQNFKSYGAWHHRKWILSK-GHSSIDNELRLLDKFQKADSRNFHAWNYRRFV 149
L + E + + Y W +R IL + ++ +EL ++ + +N+ WNYR+ +
Sbjct: 53 LHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLI 112
Query: 150 AA---SMNRSEED---ELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVL 203
+N ++ D E E M+ ++ N+ W R L V+ F
Sbjct: 113 IGQIMELNNNDFDPYREFPILEAMLSSDPKNHHVWSYRKWL--------VDTFDLHNDA- 163
Query: 204 PDEYEFVHQAIFTDPDDQSGWFYHLWLL 231
E FV + I TD + S W + +LL
Sbjct: 164 -KELSFVDKVIDTDLKNNSAWSHRFFLL 190
>sp|A3KPW7|PTAR1_DANRE Protein prenyltransferase alpha subunit repeat-containing protein 1
OS=Danio rerio GN=ptar1 PE=2 SV=1
Length = 426
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 30/211 (14%)
Query: 31 FLHNHHNHIYSKEA-VELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDE 89
L+ +EA V++++ LL NP+ TAWN RK +Q + + D
Sbjct: 73 LLYRQRKQWLDREALVDITSTLLLLNPDFTTAWNVRKELLQCGVLNPEKD---------- 122
Query: 90 ELRVVESALRQNFKSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFV 149
L + + AL ++ KS W HR+W+L + L K + R
Sbjct: 123 -LYLGKLALSKHPKSPETWIHRRWVLQR-----------LQKECSPSGQELKDSAESRRQ 170
Query: 150 AASMNRSEEDELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEF 209
+ R+ ++E++ + SNY+AW +R +L N+ K + KVL DE
Sbjct: 171 CERLQRALQEEMRVCAEAAGRYPSNYNAWSHRIWVLQNMAKGNL-------KVLHDELSS 223
Query: 210 VHQAIFTDPDDQSGWFYHLWLLDQTVRVDSP 240
+ D SG+ Y LL + SP
Sbjct: 224 TRLWVSMHVSDHSGFHYRQHLLKALAKELSP 254
>sp|Q9D5S7|LRGUK_MOUSE Leucine-rich repeat and guanylate kinase domain-containing protein
OS=Mus musculus GN=Lrguk PE=2 SV=1
Length = 820
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 537 CLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALE 596
L L N + + ++L +Q LDLSHN++ S++GLE LL +NL +N + + +E
Sbjct: 262 VLSLSNNMIETITGLEELKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIKELSEIE 321
Query: 597 PIRQLKSLRALNISYNEI 614
I L LR LN+ N I
Sbjct: 322 YIENLPILRVLNLLRNPI 339
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 537 CLQLKNLSLS--RLGSFDKL--LWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSF 592
C+ L +LSL+ ++ + L L +++L LS+N + +I GLE L+ L L+LS+N + S
Sbjct: 236 CISLTHLSLAGNKITTIKGLGTLPIKVLSLSNNMIETITGLEELKALQNLDLSHNQISSL 295
Query: 593 TALE 596
LE
Sbjct: 296 QGLE 299
>sp|Q96M69|LRGUK_HUMAN Leucine-rich repeat and guanylate kinase domain-containing protein
OS=Homo sapiens GN=LRGUK PE=2 SV=1
Length = 825
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 538 LQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEP 597
L L N + + + L +Q LDLSHN++ S++GLE LL +NL +N + +E
Sbjct: 263 LCLSNNQIEMITGLEDLKALQNLDLSHNQISSLQGLENHDLLEVINLEDNKIAELREIEY 322
Query: 598 IRQLKSLRALNISYNEIGAHS 618
I+ L LR LN+ N I S
Sbjct: 323 IKNLPILRVLNLLENPIQEKS 343
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 533 GSPMCLQLKNLSLS--RLGSFDKL--LWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNI 588
G MC L +LSL+ ++ + + L L +++L LS+N++ I GLE L+ L L+LS+N
Sbjct: 232 GLEMCNNLIHLSLANNKITTINGLNKLPIKILCLSNNQIEMITGLEDLKALQNLDLSHNQ 291
Query: 589 LGSFTALE 596
+ S LE
Sbjct: 292 ISSLQGLE 299
>sp|A0JM56|LRRC9_XENTR Leucine-rich repeat-containing protein 9 OS=Xenopus tropicalis
GN=lrrc9 PE=2 SV=2
Length = 1502
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 28/177 (15%)
Query: 538 LQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEP 597
L L + +L R+ + +KL+ ++ S N L IEGLE L LNL +N S + LE
Sbjct: 900 LTLDSQNLVRITNLEKLVNLRWASFSSNHLTKIEGLEHCVNLEELNLDDN---SISKLEG 956
Query: 598 IRQLKSLRALNISYNEIGA---HSIDTTKYLCSSPLSHSVGSEWNH---------GQTVI 645
+ +L LR L+I+ N + H I++ +L H + +E N+ G +I
Sbjct: 957 LSKLTKLRRLSINNNLLAGFDRHVIESLSHL------HFLSAENNNISSLAGLQRGYKLI 1010
Query: 646 D----DDIKSYWEAYFILKGL-NLTQFDIVGNAIV--NEKFKSFLIKVLPGLKWLDG 695
+ ++ S + + LKGL NL D+ GN I+ +E ++ F+I L +K LDG
Sbjct: 1011 ELYLSNNCISSNQEIYSLKGLNNLVILDMWGNPILLKHENYRLFVIFHLSAIKALDG 1067
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 545 LSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSL 604
LS++ +Q L L HNE+ IEGLE L L L L+NN + L+ ++ LK L
Sbjct: 88 LSKIQGLHHCADLQKLYLYHNEISVIEGLENLLKLEVLWLNNNQINVIEGLDMMQNLKEL 147
Query: 605 RALNISYNEIG 615
N + IG
Sbjct: 148 NLANNLIHSIG 158
>sp|A2AL36|CNTRL_MOUSE Centriolin OS=Mus musculus GN=Cntrl PE=2 SV=2
Length = 2334
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 35/187 (18%)
Query: 537 CLQLKNLSLS-----RLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGS 591
C++L+ L+LS ++ DKLL ++ L+LS+N++ IEGLE + L LNL+ N +
Sbjct: 124 CVKLEVLNLSYNLIVKIEKVDKLLRLRELNLSYNKISKIEGLENMCNLQKLNLAGNEIEH 183
Query: 592 FTALEPI---RQLKSLRALNISYNEIGAHSIDTTK----------YLCSSPLS------- 631
P+ ++LKSLR LN+ N+I + D +K L +P+
Sbjct: 184 I----PVWFAKKLKSLRVLNLKGNKISSLQ-DVSKLKPLQDLTSLVLIDNPVVALPHYLQ 238
Query: 632 ----HSVGSEWNHGQTVIDDDIKSYWEAYFILKGLNLTQFDIVGNAIVNEKFKSFLIKVL 687
H E GQ V D + +E F L+ + + D+ + E+ K+ K L
Sbjct: 239 FIIFHLRSLESLEGQPVTTQDRQEAFE-RFSLEEIERLEKDLEKKTVETEELKNKQTKFL 297
Query: 688 PGLKWLD 694
+K D
Sbjct: 298 EEIKNQD 304
>sp|Q7Z7A1|CNTRL_HUMAN Centriolin OS=Homo sapiens GN=CNTRL PE=1 SV=2
Length = 2325
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 33/186 (17%)
Query: 537 CLQLKNLSLS-----RLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGS 591
C++L+ L+LS ++ DKLL ++ L+LS+N++ IEG+E + L LNL+ N +
Sbjct: 124 CVKLEVLNLSYNLIGKIEKLDKLLKLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEH 183
Query: 592 FTALEPI---RQLKSLRALNISYNEIGA-HSIDTTK--------YLCSSPLS-------- 631
P+ ++LKSLR LN+ N+I + I K L +P+
Sbjct: 184 I----PVWLGKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQF 239
Query: 632 ---HSVGSEWNHGQTVIDDDIKSYWEAYFILKGLNLTQFDIVGNAIVNEKFKSFLIKVLP 688
H E GQ V D + +E F L+ + + D+ I E+ KS + L
Sbjct: 240 TIFHLRSLESLEGQPVTTQDRQEAFE-RFSLEEVERLERDLEKKMIETEELKSKQTRFLE 298
Query: 689 GLKWLD 694
+K D
Sbjct: 299 EIKNQD 304
>sp|Q6NRC9|LRCC1_XENLA Leucine-rich repeat and coiled-coil domain-containing protein 1
OS=Xenopus laevis GN=lrrcc1 PE=2 SV=1
Length = 1030
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 18/157 (11%)
Query: 545 LSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSL 604
+S++ L ++Q LDLS N + IEGL++L L LNLS N L T +E + +L +L
Sbjct: 40 ISKIEGLRHLCYLQHLDLSSNLITKIEGLDSLASLQSLNLSCNKL---TRVEGLEKLFNL 96
Query: 605 RALNISYNEIGAHSIDTTKYLCSSPL---SHSVGSEWNHGQTV--IDDDIKSYWEAYFIL 659
+ LN+SYN I D T + PL +H + + H + ID+ ++S +L
Sbjct: 97 KKLNLSYNSIQ----DLTGLI---PLHGWNHKLSHLYLHSNCINSIDEVLQSTVGLNCLL 149
Query: 660 KGLNLTQFDIVGNAIVNE-KFKSFLIKVLPGLKWLDG 695
L L Q + GN + + ++ +++ LP L LDG
Sbjct: 150 -HLTLEQ-NAKGNPVCHALGYREIILENLPQLNSLDG 184
>sp|Q9C099|LRCC1_HUMAN Leucine-rich repeat and coiled-coil domain-containing protein 1
OS=Homo sapiens GN=LRRCC1 PE=1 SV=2
Length = 1032
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 544 SLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKS 603
++S++ + D + +Q LDLS N++ IEGL L L LNLS N++ T +E + +L +
Sbjct: 54 NISKIEAIDHIWNLQHLDLSSNQISRIEGLNTLTKLCTLNLSCNLI---TKVEGLEELIN 110
Query: 604 LRALNISYNEI 614
L LN+SYN I
Sbjct: 111 LTRLNVSYNHI 121
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 538 LQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEP 597
L L + +SR+ + L + L+LS N + +EGLE L L+ LN+S N + + L P
Sbjct: 70 LDLSSNQISRIEGLNTLTKLCTLNLSCNLITKVEGLEELINLTRLNVSYNHIDDLSGLIP 129
Query: 598 IRQLK-SLRALNISYNEIGA 616
+ +K LR +++ N I +
Sbjct: 130 LHGIKHKLRYIDLHSNRIDS 149
>sp|A1L3L1|PTR1B_XENLA Protein prenyltransferase alpha subunit repeat-containing protein
1-B (Fragment) OS=Xenopus laevis GN=ptar1-b PE=2 SV=1
Length = 431
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 49/213 (23%)
Query: 43 EAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNF 102
E ++++ LL NP+ TAWN RK +Q +L + D L++ + AL +
Sbjct: 85 ELIDVTCTLLLLNPDFTTAWNVRKELIQS---------GTLNPVKD--LQLGKLALTKFP 133
Query: 103 KSYGAWHHRKWILSKG-----------------------HSSIDNELRLLDKFQKADSRN 139
KS W HR+W+L + + + E+ + + N
Sbjct: 134 KSPETWIHRRWVLQRVVQELVVAAVVGKDATCPETYERIQTIVQEEMHVCYEAAGRYPSN 193
Query: 140 FHAWNYRRFVAASMNRSEE----DELKYTEDMICNNFSNYSAWHNRSLLLSNLLKRK--- 192
+++W++R +V + DEL T+ + + S++S +H R LL +LL +
Sbjct: 194 YNSWSHRIWVIQHLGNLNVKLLIDELSSTKHWVSMHVSDHSGFHYRQFLLKSLLCKTLKD 253
Query: 193 ------VEGFVSKEK--VLPDEYEFVHQAIFTD 217
V ++ EK LP E E + I D
Sbjct: 254 SDNVTAVPDLIANEKNPCLPREGEAIWNQICFD 286
>sp|Q7Z6K3|PTAR1_HUMAN Protein prenyltransferase alpha subunit repeat-containing protein 1
OS=Homo sapiens GN=PTAR1 PE=2 SV=2
Length = 402
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 77/193 (39%), Gaps = 30/193 (15%)
Query: 43 EAVELSTKLLETNPELYTAWNYRKLAVQHKLTENDSDPDSLKSILDEELRVVESALRQNF 102
E ++++ LL NP+ TAWN RK + +L I D L + + AL +
Sbjct: 86 ELIDVTCTLLLLNPDFTTAWNVRKELILS---------GTLNPIKD--LHLGKLALTKFP 134
Query: 103 KSYGAWHHRKWILSKGHSSIDNELRLLDKFQKADSRNFHAWNYRRFVAASMNRSEEDELK 162
KS W HR+W+L + + E L K + +R + M E +
Sbjct: 135 KSPETWIHRRWVLQQ----LIQETSLPSFVTKGNLGTIPTERAQRLIQEEMEVCGEAAGR 190
Query: 163 YTEDMICNNFSNYSAWHNRSLLLSNLLKRKVEGFVSKEKVLPDEYEFVHQAIFTDPDDQS 222
Y SNY+AW +R +L +L K V K+L DE D S
Sbjct: 191 YP--------SNYNAWSHRIWVLQHLAKLDV-------KILLDELSSTKHWASMHVSDHS 235
Query: 223 GWFYHLWLLDQTV 235
G+ Y +LL +
Sbjct: 236 GFHYRQFLLKSLI 248
>sp|Q69ZB0|LRCC1_MOUSE Leucine-rich repeat and coiled-coil domain-containing protein 1
OS=Mus musculus GN=Lrrcc1 PE=2 SV=2
Length = 1026
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 544 SLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKS 603
++S++ S D + ++ LDLS N++ IEGL L L LNLS N++ LE L +
Sbjct: 49 NISKISSIDHIWNLRHLDLSSNQISQIEGLNTLTKLCTLNLSCNLITRVEGLEA---LVN 105
Query: 604 LRALNISYNEIG 615
L LN+SYN I
Sbjct: 106 LTKLNLSYNHIN 117
Score = 36.6 bits (83), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 538 LQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEP 597
L L + +S++ + L + L+LS N + +EGLEAL L+ LNLS N + + L P
Sbjct: 65 LDLSSNQISQIEGLNTLTKLCTLNLSCNLITRVEGLEALVNLTKLNLSYNHINDLSGLMP 124
Query: 598 IRQLK-SLRALNISYNEIGA 616
+ LK LR +++ N I +
Sbjct: 125 LHGLKYKLRYIDLHSNYIDS 144
>sp|Q8R2R5|LRC61_MOUSE Leucine-rich repeat-containing protein 61 OS=Mus musculus GN=Lrrc61
PE=2 SV=1
Length = 259
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 536 MCLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTAL 595
+ L+L+ L + LG + L ++ LDLS N L + L +L+ L+ LN+SNN L T L
Sbjct: 34 LLLKLRGLGVVDLGCLGECLNLEWLDLSGNALTHLGPLASLRQLAVLNVSNNRL---TGL 90
Query: 596 EPIRQLKSLRALNISYN 612
EP+ ++L++LN + N
Sbjct: 91 EPLAACENLQSLNAAGN 107
>sp|Q8CDN9|LRRC9_MOUSE Leucine-rich repeat-containing protein 9 OS=Mus musculus GN=Lrrc9
PE=2 SV=2
Length = 1456
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 545 LSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSF-TALEPIRQLKS 603
+S++ + +KL+ +++L L+HN +++IEGL+ L+ L LNL+ N++ S L+P QL+
Sbjct: 110 ISKIENLEKLIKLEVLWLNHNMIKNIEGLQTLKNLKDLNLAGNLVSSIGRCLDPNEQLEK 169
Query: 604 LRALNISYNEIGA 616
LN+S N+I +
Sbjct: 170 ---LNLSGNQITS 179
Score = 40.0 bits (92), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 538 LQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEP 597
L L L + + +KL ++ S+N L +EGLE+ L L L N + +
Sbjct: 882 LNLDGQHLFEITNLEKLENLKWASFSNNNLSKMEGLESCVNLEELTLDGNCISKIEGITR 941
Query: 598 IRQLKSLRALNISYNEIGAHSIDTTKYLCSSPLSHSVGSEWNHGQ---TVIDDDIKSYWE 654
+ +L L N + H+ D +L S L ++ + + Q T+I+ I + +
Sbjct: 942 LTKLSRLSMNNNLLTGLEKHTFDNLLHLHSLSLENNRITSLSALQKTFTLIELYISNNYI 1001
Query: 655 AY----FILKGL-NLTQFDIVGNAIV--NEKFKSFLIKVLPGLKWLDG 695
A + LKGL NL D+ GN I+ E ++ F+I LP LK LDG
Sbjct: 1002 AVNQEIYNLKGLCNLVILDMYGNIIIWNQENYRFFVIFHLPELKALDG 1049
>sp|Q7PK92|DAAF1_ANOGA Dynein assembly factor 1, axonemal homolog OS=Anopheles gambiae
GN=AGAP009594 PE=3 SV=2
Length = 910
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 39/162 (24%)
Query: 537 CLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIE--GLEALQLLSCLNLSNNILGSFTA 594
CL L N + ++ + + L+LSHN + IE G + L +L+ LN+S+N L S +
Sbjct: 68 CLYLHNNLIKKIENLQHCKQLDTLNLSHNHIAKIENCGSDILPVLNTLNISHNYLKSIES 127
Query: 595 LEPIRQLKSLRALNISYNEIGAHSIDTTKYLCSSPLSHSVGSEWNHGQTVIDDDIKSYWE 654
L +R+ + L+IS+N I I K L
Sbjct: 128 LAELRKCDFVSVLDISHNRI--EDIAIVKVLAD--------------------------- 158
Query: 655 AYFILKGLNLTQFDIVGNAIVNE--KFKSFLIKVLPGLKWLD 694
+KGL + +VGN +VN+ ++ LI L +LD
Sbjct: 159 ----MKGLRV--LTLVGNPVVNDIPSYRKTLILECKSLTYLD 194
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 548 LGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSLRAL 607
+ D+ + ++ L L N + +I GL+ L CL L NN++ +E ++ K L L
Sbjct: 35 IDGLDEYVGLKCLWLECNAISNISGLDHQSQLRCLYLHNNLI---KKIENLQHCKQLDTL 91
Query: 608 NISYNEIG 615
N+S+N I
Sbjct: 92 NLSHNHIA 99
>sp|Q96JM4|LRIQ1_HUMAN Leucine-rich repeat and IQ domain-containing protein 1 OS=Homo
sapiens GN=LRRIQ1 PE=2 SV=3
Length = 1722
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 560 LDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSLRALNISYNEIGAHS- 618
LD SHN L +EG+E LL L L N L +LE + L+ L + S + + A S
Sbjct: 996 LDCSHNHLTDVEGVENCGLLQILKLQGNYLSELPSLENLVLLRELHLDDNSISTVEAFSS 1055
Query: 619 ----------IDTTKYLCSSPLSHSVGSEWNHGQTVIDDDIKS---YWEAYFILKGLNLT 665
I PL H V E D+KS +++A + L L+LT
Sbjct: 1056 YWLPLLQNITISQNSLTKIVPLFHFVSLEKLDVSHNCLSDLKSAIKWFDACYSLHELSLT 1115
Query: 666 QFDIVGNAIVNE-KFKSFLIKVLPGLKWLDG 695
GN ++ E ++ L+KVLP L+ L+G
Sbjct: 1116 -----GNPLLQETNWRDSLLKVLPALRILNG 1141
>sp|Q16RY9|DAAF1_AEDAE Dynein assembly factor 1, axonemal homolog OS=Aedes aegypti
GN=AAEL010772 PE=3 SV=1
Length = 1107
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 537 CLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIE--GLEALQLLSCLNLSNNILGSFTA 594
CL L+N ++++ + D + L+LSHN + IE G + L +L+ LNLS+N L +
Sbjct: 82 CLYLQNNLITKIENLDSCKQLDTLNLSHNHITRIENCGHDILPVLNTLNLSHNYLKTADN 141
Query: 595 LEPIRQLKSLRALNISYNEI 614
L+ +R + L++S+N I
Sbjct: 142 LDHLRHCNFVSVLDLSHNRI 161
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 548 LGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSLRAL 607
+ S ++ + ++ L L N + I+GLE L CL L NN++ T +E + K L L
Sbjct: 49 IESLEEYVGLKCLWLECNAISEIKGLEYQTELKCLYLQNNLI---TKIENLDSCKQLDTL 105
Query: 608 NISYNEI 614
N+S+N I
Sbjct: 106 NLSHNHI 112
>sp|Q6ZRR7|LRRC9_HUMAN Leucine-rich repeat-containing protein 9 OS=Homo sapiens GN=LRRC9
PE=2 SV=2
Length = 1453
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 538 LQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNIL--GSFTAL 595
L L L + + +KL ++ S+N L +EGLE SC+NL L + +
Sbjct: 892 LNLDGQHLFEITNLEKLENLKWASFSNNNLTKMEGLE-----SCINLEELTLDGNCISKI 946
Query: 596 EPIRQLKSLRALNISYNEIGA---HSIDTTKYLCSSPLSHS-------VGSEWNHGQTVI 645
E I ++ L L+I+ N + H+ D +L S L ++ + + + I
Sbjct: 947 EGISKMTKLTRLSINNNLLTGWEEHTFDNMLHLHSLSLENNRITSLSGLQKSFTLVELYI 1006
Query: 646 DDDIKSYWEAYFILKGL-NLTQFDIVGNAIV--NEKFKSFLIKVLPGLKWLDG 695
++ + + LKGL NL D+ GN I+ E ++ F+I LP LK LDG
Sbjct: 1007 SNNYIAVNQEMHNLKGLCNLVILDMCGNIIIWNQENYRLFVIFHLPELKALDG 1059
Score = 40.8 bits (94), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 545 LSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSF-TALEPIRQLKS 603
+S++ + +KL+ +++L L+HN +++IEGL+ L+ L LNL+ N++ S L+ QL+
Sbjct: 110 ISKIENLEKLIKLKVLWLNHNTIKNIEGLQTLKNLKDLNLAGNLINSIGRCLDSNEQLER 169
Query: 604 LRALNISYNEI 614
LN+S N+I
Sbjct: 170 ---LNLSGNQI 177
>sp|Q8NEP3|DAAF1_HUMAN Dynein assembly factor 1, axonemal OS=Homo sapiens GN=DNAAF1 PE=1
SV=5
Length = 725
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 22/142 (15%)
Query: 553 KLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSLRALNISYN 612
+ LW+Q N ++ IE LEA L CL L N+L LEP L+ L ALN+S N
Sbjct: 132 RCLWLQ-----SNGIQKIENLEAQTELRCLFLQMNLLRKIENLEP---LQKLDALNLSNN 183
Query: 613 EIGAHSIDTTKYLCSSPLSHSVGSEWNHGQTVIDDDIKSYWEAYFILKGLNLTQFDIVGN 672
I T + L P+ +++ NH +TV +DI+ E L L D+ N
Sbjct: 184 -----YIKTIENLSCLPVLNTLQMAHNHLETV--EDIQHLQEC------LRLCVLDLSHN 230
Query: 673 AIVNEKFKSFLIKVLPGLKWLD 694
+ + + S L + +P L+ L+
Sbjct: 231 KLSDPEILSIL-ESMPDLRVLN 251
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 27/166 (16%)
Query: 537 CLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALE 596
CL L++ + ++ + + ++ L L N LR IE LE LQ L LNLSNN + + +E
Sbjct: 133 CLWLQSNGIQKIENLEAQTELRCLFLQMNLLRKIENLEPLQKLDALNLSNNYIKT---IE 189
Query: 597 PIRQLKSLRALNISYNEIGAHSIDTTKY------LCSSPLSHSVGSEWNHGQTVIDDDIK 650
+ L L L +++N + +++ ++ LC LSH+ + D +I
Sbjct: 190 NLSCLPVLNTLQMAHNHL--ETVEDIQHLQECLRLCVLDLSHN---------KLSDPEIL 238
Query: 651 SYWEAYFILKGLNLTQFDIVGNAIVNE--KFKSFLIKVLPGLKWLD 694
S E+ L+ LNL +GN ++ + ++ + L L +LD
Sbjct: 239 SILESMPDLRVLNL-----MGNPVIRQIPNYRRTVTVRLKHLTYLD 279
>sp|B4P6W7|DAAF1_DROYA Dynein assembly factor 1, axonemal homolog OS=Drosophila yakuba
GN=dtr PE=3 SV=1
Length = 1509
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 553 KLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSLRALNISYN 612
K LW++ N + I+GLE L L CL L NN++ LEP R+L + LN+S N
Sbjct: 59 KCLWLEC-----NAISEIQGLEKLSKLKCLFLQNNLITKIENLEPCRELDT---LNLSSN 110
Query: 613 EI 614
I
Sbjct: 111 HI 112
>sp|Q6UXK2|ISLR2_HUMAN Immunoglobulin superfamily containing leucine-rich repeat protein 2
OS=Homo sapiens GN=ISLR2 PE=2 SV=1
Length = 745
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 536 MCLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIE--GLEALQLLSCLNLSNNILGSFT 593
+ L +++ R G+F + V L L+HNE+R++E L L L L+LS+N + SF
Sbjct: 56 LSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGALAVLSQLKNLDLSHNFISSFP 115
Query: 594 ALEPIRQLKSLRALNISYNEIGAHSIDTTKYL 625
+ +R L +L+ L +++N +G+ D L
Sbjct: 116 WSD-LRNLSALQLLKMNHNRLGSLPRDALGAL 146
>sp|Q9BV99|LRC61_HUMAN Leucine-rich repeat-containing protein 61 OS=Homo sapiens GN=LRRC61
PE=2 SV=1
Length = 259
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 548 LGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSLRAL 607
LG + L ++ LDLS N L + L +L+ L+ LN+SNN L T LEP+ ++L++L
Sbjct: 46 LGCLGECLGLEWLDLSGNALTHLGPLASLRQLAVLNVSNNRL---TGLEPLATCENLQSL 102
Query: 608 NISYN 612
N + N
Sbjct: 103 NAAGN 107
>sp|Q3TAA7|S11IP_MOUSE Serine/threonine-protein kinase 11-interacting protein OS=Mus
musculus GN=Stk11ip PE=1 SV=1
Length = 1072
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 560 LDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSLRALNISYNEI---GA 616
L L NELRS++GLE L+ L L+++ N+L T L P+ L LR L + N + A
Sbjct: 237 LILRANELRSLQGLEQLKNLRHLDVAYNLLEGHTELAPLWLLAELRKLYLEGNPLWFHPA 296
Query: 617 HSIDTTKYL 625
H T +YL
Sbjct: 297 HRAATAQYL 305
>sp|Q5HZV9|PP1R7_RAT Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus
GN=Ppp1r7 PE=1 SV=1
Length = 360
Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 536 MCLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTAL 595
+CL+ +NL + + + D+L ++ LDL N+++ IE LEAL L L++S N+L + +
Sbjct: 103 LCLR-QNL-IKCIENLDELQSLRELDLYDNQIKKIENLEALTELEVLDISFNLLRNIEGI 160
Query: 596 EPIRQLKSLRALNISYNEI 614
+ + QLK L +N N+I
Sbjct: 161 DKLTQLKKLFLVNNKINKI 179
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 545 LSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSL 604
+ ++ + + L +++LD+S N LR+IEG++ L L L L NN +E I L+ L
Sbjct: 132 IKKIENLEALTELEVLDISFNLLRNIEGIDKLTQLKKLFLVNN---KINKIENISTLQQL 188
Query: 605 RALNISYNEIGA-HSIDTTKYLCS 627
+ L + N I A +IDT L S
Sbjct: 189 QMLELGSNRIRAIENIDTLTNLES 212
>sp|Q3SYS4|DAAF1_BOVIN Dynein assembly factor 1, axonemal OS=Bos taurus GN=DNAAF1 PE=2
SV=2
Length = 643
Score = 41.2 bits (95), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 544 SLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKS 603
R+ + ++ ++ L L N ++ IE LEA L CL L N+L LEP L+
Sbjct: 118 GFDRIENLEEYTGLRCLWLECNGIQKIENLEAQTELRCLFLQVNLLHKIENLEP---LQK 174
Query: 604 LRALNISYNEIGAHSIDTTKYLCSSPLSHSVGSEWNHGQTVID 646
L ALNIS N I T + L P+ +++ NH +TV D
Sbjct: 175 LDALNISNN-----YIKTIENLSCLPVLNTLQMAHNHLETVED 212
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 49/83 (59%)
Query: 537 CLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALE 596
CL L+ L ++ + + L + L++S+N +++IE L L +L+ L +++N L + ++
Sbjct: 155 CLFLQVNLLHKIENLEPLQKLDALNISNNYIKTIENLSCLPVLNTLQMAHNHLETVEDIQ 214
Query: 597 PIRQLKSLRALNISYNEIGAHSI 619
+R+ L L++S+N++ I
Sbjct: 215 HLRECARLCVLDLSHNKLSDPEI 237
Score = 36.2 bits (82), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 537 CLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALE 596
CL L+ + ++ + + ++ L L N L IE LE LQ L LN+SNN + + +E
Sbjct: 133 CLWLECNGIQKIENLEAQTELRCLFLQVNLLHKIENLEPLQKLDALNISNNYIKT---IE 189
Query: 597 PIRQLKSLRALNISYNEIGA----HSIDTTKYLCSSPLSHSVGSEWNHGQTVIDDDIKSY 652
+ L L L +++N + + LC LSH+ + D +I
Sbjct: 190 NLSCLPVLNTLQMAHNHLETVEDIQHLRECARLCVLDLSHN---------KLSDPEILRV 240
Query: 653 WEAYFILKGLNLTQFDIVGNAIVNEKFKSFLIKVLPGLKWLD 694
E+ L+ LNL ++ N I N ++ L L L +LD
Sbjct: 241 LESMPDLRVLNLMGNPVIKN-IPN--YRRILTVRLKHLTYLD 279
>sp|Q29KL8|DAAF1_DROPS Dynein assembly factor 1, axonemal homolog OS=Drosophila
pseudoobscura pseudoobscura GN=dtr PE=3 SV=2
Length = 1582
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 537 CLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIE--GLEALQLLSCLNLSNNILGSFTA 594
CL L+N ++++ + + + L+LS N +R IE G + L +L+ LN+++N L +
Sbjct: 86 CLYLQNNLITKMENLEFNRELDTLNLSQNHIRKIENIGTDILPVLNTLNITSNYLTDSAS 145
Query: 595 LEPIRQLKSLRALNISYNEI 614
L + + K+L L++S N I
Sbjct: 146 LAALVECKTLSVLDLSNNRI 165
>sp|Q3T0W4|PP1R7_BOVIN Protein phosphatase 1 regulatory subunit 7 OS=Bos taurus GN=PPP1R7
PE=1 SV=1
Length = 360
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 545 LSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSL 604
+ R+ + D L +++LD+S N LR+IEG++ L L L L NN +E I L L
Sbjct: 132 IRRIENLDALTELEVLDISFNLLRNIEGIDKLTRLKKLFLVNN---KINKIENISSLHQL 188
Query: 605 RALNISYNEIGA-HSIDTTKYLCS 627
+ L + N I A +IDT L S
Sbjct: 189 QMLELGSNRIRAIENIDTLTNLES 212
>sp|B4GT53|DAAF1_DROPE Dynein assembly factor 1, axonemal homolog OS=Drosophila persimilis
GN=dtr PE=3 SV=1
Length = 1501
Score = 40.8 bits (94), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 537 CLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIE--GLEALQLLSCLNLSNNILGSFTA 594
CL L+N ++++ + + + L+LS N +R IE G + L +L+ LN+++N L +
Sbjct: 86 CLYLQNNLITKMENLEFNRELDTLNLSQNHIRKIENIGTDILPVLNTLNITSNYLTDSAS 145
Query: 595 LEPIRQLKSLRALNISYNEI 614
L + + K+L L++S N I
Sbjct: 146 LAALVECKTLSVLDLSNNRI 165
>sp|Q4R6X9|LRC48_MACFA Leucine-rich repeat-containing protein 48 OS=Macaca fascicularis
GN=LRRC48 PE=2 SV=1
Length = 523
Score = 40.8 bits (94), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 39/158 (24%)
Query: 538 LQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEP 597
LQL N + ++G + L + LDLS N + +IEGL+ L L L+L NN + +L+
Sbjct: 70 LQLDNNIIEKIGGLENLTHLVWLDLSFNNIETIEGLDTLVNLEDLSLFNNRISKIDSLDA 129
Query: 598 IRQLKSLRALNISYNEIGAHSIDTTKYLCSSPLSHSVGSEWNHGQTVIDDDIKSYWEAYF 657
+ +L+ L +G + ID + Y +
Sbjct: 130 LVKLQVLS--------LGNNQIDNMMNIV-------------------------YLRRFQ 156
Query: 658 ILKGLNLTQFDIVGNAIVN-EKFKSFLIKVLPGLKWLD 694
L+ L+L+ GN I E +K F+ LP L +LD
Sbjct: 157 CLRTLSLS-----GNPISEAEDYKMFICAYLPDLVYLD 189
>sp|Q6DIQ3|PP1R7_XENTR Protein phosphatase 1 regulatory subunit 7 OS=Xenopus tropicalis
GN=ppp1r7 PE=2 SV=1
Length = 346
Score = 40.8 bits (94), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 545 LSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTALEPIRQLKSL 604
+ ++G+ + L +Q+LDLS N LR IEGLE+L L L L NN + +E L L
Sbjct: 118 IRKIGNLETLRDLQILDLSFNLLRRIEGLESLSHLQRLYLVNN---KISRIENFGTLTQL 174
Query: 605 RALNISYNEIGA-HSIDTTKYLCS 627
R L + N + ++D+ + L S
Sbjct: 175 RLLELGSNRLRVIENLDSLRELDS 198
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 536 MCLQLKNLSLSRLGSFDKLLWVQMLDLSHNELRSIEGLEALQLLSCLNLSNNILGSFTAL 595
+CL+ +NL + + + ++L+ + LDL N++R I LE L+ L L+LS N+L L
Sbjct: 89 LCLR-QNL-IKLIENLEQLVTLTELDLYDNQIRKIGNLETLRDLQILDLSFNLLRRIEGL 146
Query: 596 EPIRQLKSLRALN 608
E + L+ L +N
Sbjct: 147 ESLSHLQRLYLVN 159
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 263,422,729
Number of Sequences: 539616
Number of extensions: 10906693
Number of successful extensions: 28118
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 27388
Number of HSP's gapped (non-prelim): 624
length of query: 699
length of database: 191,569,459
effective HSP length: 125
effective length of query: 574
effective length of database: 124,117,459
effective search space: 71243421466
effective search space used: 71243421466
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)