Query 005387
Match_columns 699
No_of_seqs 185 out of 241
Neff 5.8
Searched_HMMs 46136
Date Thu Mar 28 22:38:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005387.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005387hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3566 Glycosylphosphatidylin 100.0 1E-113 3E-118 939.2 46.1 602 7-698 6-616 (617)
2 PF04114 Gaa1: Gaa1-like, GPI 100.0 8E-107 2E-111 910.4 48.8 486 145-697 2-503 (504)
3 PRK10199 alkaline phosphatase 98.5 1.2E-05 2.5E-10 87.8 20.3 118 93-225 55-189 (346)
4 KOG2194 Aminopeptidases of the 96.8 0.011 2.4E-07 70.6 12.7 155 46-223 38-209 (834)
5 PF04389 Peptidase_M28: Peptid 96.7 0.0047 1E-07 60.5 7.4 65 162-226 1-75 (179)
6 PRK06133 glutamate carboxypept 96.2 0.08 1.7E-06 59.1 14.3 125 73-226 38-185 (410)
7 TIGR01883 PepT-like peptidase 95.9 0.08 1.7E-06 57.7 12.2 122 76-224 4-146 (361)
8 PRK08596 acetylornithine deace 95.8 0.11 2.4E-06 58.2 13.4 125 73-224 14-165 (421)
9 TIGR01879 hydantase amidase, h 95.8 0.069 1.5E-06 59.4 11.7 100 94-225 32-139 (401)
10 TIGR01892 AcOrn-deacetyl acety 95.6 0.094 2E-06 56.9 11.5 104 94-226 19-145 (364)
11 PRK09133 hypothetical protein; 95.4 0.23 5E-06 56.5 14.2 129 71-226 36-191 (472)
12 PRK08588 succinyl-diaminopimel 95.4 0.2 4.3E-06 55.0 13.0 119 74-224 4-147 (377)
13 PRK12890 allantoate amidohydro 95.2 0.15 3.3E-06 56.8 11.7 100 93-224 38-145 (414)
14 PRK12891 allantoate amidohydro 95.0 0.22 4.7E-06 55.8 12.3 96 94-221 41-144 (414)
15 PRK12892 allantoate amidohydro 95.0 0.17 3.7E-06 56.2 11.2 99 94-225 40-146 (412)
16 PRK09290 allantoate amidohydro 94.9 0.22 4.7E-06 55.6 11.7 100 94-225 38-145 (413)
17 PRK05111 acetylornithine deace 94.6 0.45 9.7E-06 52.2 13.3 122 74-225 7-157 (383)
18 PRK12893 allantoate amidohydro 94.4 0.44 9.6E-06 53.0 12.7 100 94-225 41-148 (412)
19 PRK13009 succinyl-diaminopimel 94.3 0.6 1.3E-05 51.0 13.3 120 74-226 4-149 (375)
20 PRK07906 hypothetical protein; 94.3 0.37 8.1E-06 53.9 11.9 105 93-225 25-154 (426)
21 PRK08652 acetylornithine deace 94.2 0.48 1E-05 51.1 12.0 115 74-225 4-133 (347)
22 PRK07522 acetylornithine deace 94.0 0.74 1.6E-05 50.5 13.3 123 74-226 6-151 (385)
23 TIGR01893 aa-his-dipept aminoa 93.9 0.46 1E-05 54.3 11.8 117 74-225 6-153 (477)
24 TIGR03176 AllC allantoate amid 93.9 0.45 9.7E-06 53.3 11.3 97 94-222 34-138 (406)
25 TIGR01910 DapE-ArgE acetylorni 93.8 0.57 1.2E-05 51.4 11.8 108 93-226 21-154 (375)
26 PRK13013 succinyl-diaminopimel 93.7 0.93 2E-05 50.6 13.6 129 73-222 15-169 (427)
27 PRK07473 carboxypeptidase; Pro 93.6 1.2 2.7E-05 49.2 14.0 125 75-226 14-161 (376)
28 PRK13983 diaminopimelate amino 93.4 1.2 2.7E-05 48.9 13.7 130 73-225 6-166 (400)
29 TIGR01882 peptidase-T peptidas 93.3 0.62 1.3E-05 52.1 11.3 99 94-223 34-187 (410)
30 PRK13381 peptidase T; Provisio 92.9 0.96 2.1E-05 50.3 12.1 100 94-224 32-184 (404)
31 PRK06446 hypothetical protein; 92.9 1.4 2.9E-05 49.8 13.3 120 75-226 5-151 (436)
32 PF05450 Nicastrin: Nicastrin; 92.5 2 4.3E-05 45.0 12.9 123 164-305 3-137 (234)
33 PRK08262 hypothetical protein; 92.5 1.5 3.3E-05 50.1 13.1 137 51-225 30-202 (486)
34 PRK13004 peptidase; Reviewed 92.2 2.2 4.8E-05 47.3 13.8 116 74-224 17-158 (399)
35 PLN02693 IAA-amino acid hydrol 92.2 1.9 4E-05 49.0 13.2 119 72-225 47-183 (437)
36 PRK07907 hypothetical protein; 92.0 2.3 4.9E-05 48.1 13.7 120 74-225 20-169 (449)
37 PRK06837 acetylornithine deace 91.8 2.5 5.3E-05 47.6 13.6 122 76-209 24-170 (427)
38 PRK07338 hypothetical protein; 91.8 2.7 5.9E-05 46.5 13.8 117 94-226 41-178 (402)
39 PRK06915 acetylornithine deace 91.7 2.5 5.4E-05 47.2 13.5 136 74-223 19-180 (422)
40 PRK09104 hypothetical protein; 91.5 2.4 5.3E-05 48.1 13.3 103 94-226 44-177 (464)
41 PRK13590 putative bifunctional 91.5 1.2 2.7E-05 52.5 11.1 96 94-221 215-319 (591)
42 PRK05469 peptidase T; Provisio 90.9 2.3 4.9E-05 47.5 12.1 98 94-223 33-185 (408)
43 PRK08651 succinyl-diaminopimel 90.9 2 4.3E-05 47.4 11.5 129 73-226 7-160 (394)
44 PRK13799 unknown domain/N-carb 90.5 1.7 3.7E-05 51.3 11.1 97 94-222 215-320 (591)
45 PRK07205 hypothetical protein; 90.4 3.4 7.4E-05 46.7 13.0 96 95-225 43-164 (444)
46 PRK00466 acetyl-lysine deacety 90.2 2.3 5E-05 46.2 11.1 111 73-225 11-136 (346)
47 PRK04443 acetyl-lysine deacety 90.2 3.5 7.6E-05 44.9 12.5 115 74-226 8-137 (348)
48 PRK08201 hypothetical protein; 89.6 4.1 8.9E-05 46.1 12.9 103 94-226 41-169 (456)
49 TIGR01880 Ac-peptdase-euk N-ac 89.4 4.9 0.00011 44.5 13.1 123 74-224 11-160 (400)
50 COG0624 ArgE Acetylornithine d 89.4 5 0.00011 44.6 13.2 108 92-227 33-166 (409)
51 TIGR01902 dapE-lys-deAc N-acet 89.2 2.8 6E-05 45.4 10.7 108 79-225 4-126 (336)
52 TIGR01891 amidohydrolases amid 88.9 4.8 0.0001 44.0 12.4 116 76-224 3-136 (363)
53 PRK13007 succinyl-diaminopimel 88.3 4.6 0.0001 43.7 11.7 113 73-224 8-140 (352)
54 PRK15026 aminoacyl-histidine d 86.9 21 0.00046 41.2 16.5 182 74-304 12-232 (485)
55 TIGR03526 selenium_YgeY putati 86.5 11 0.00024 41.8 13.6 116 74-224 15-156 (395)
56 TIGR01246 dapE_proteo succinyl 86.3 8.7 0.00019 42.0 12.5 114 77-223 4-143 (370)
57 PLN02280 IAA-amino acid hydrol 85.5 11 0.00025 43.3 13.4 98 93-224 117-232 (478)
58 PRK08554 peptidase; Reviewed 85.4 12 0.00025 42.6 13.2 87 94-213 28-138 (438)
59 PRK07318 dipeptidase PepV; Rev 83.2 12 0.00026 42.7 12.2 46 179-225 119-166 (466)
60 TIGR03320 ygeY M20/DapE family 80.5 26 0.00055 38.9 13.4 101 74-209 15-140 (395)
61 COG2234 Iap Predicted aminopep 80.5 9.1 0.0002 42.9 9.9 82 144-227 182-276 (435)
62 KOG2526 Predicted aminopeptida 77.2 8.1 0.00018 43.7 7.8 80 144-223 191-287 (555)
63 PRK07079 hypothetical protein; 74.7 49 0.0011 37.7 13.8 126 74-226 19-177 (469)
64 TIGR01887 dipeptidaselike dipe 70.0 37 0.0008 38.7 11.3 47 180-226 108-155 (447)
65 TIGR01886 dipeptidase dipeptid 66.8 72 0.0016 36.5 12.8 48 178-226 117-166 (466)
66 PRK06156 hypothetical protein; 66.8 81 0.0018 36.7 13.4 48 180-228 156-205 (520)
67 PF09940 DUF2172: Domain of un 63.4 41 0.00088 37.8 9.4 77 145-227 114-190 (386)
68 KOG2195 Transferrin receptor a 63.4 22 0.00048 43.0 8.0 85 143-228 335-424 (702)
69 TIGR01900 dapE-gram_pos succin 61.4 48 0.001 36.6 9.8 46 180-225 105-155 (373)
70 COG4187 RocB Arginine degradat 49.6 2.5E+02 0.0054 32.5 12.7 135 73-227 9-189 (553)
71 COG1473 AbgB Metal-dependent a 49.4 1.7E+02 0.0036 33.2 11.6 117 74-223 14-148 (392)
72 TIGR03107 glu_aminopep glutamy 48.8 2.9E+02 0.0063 30.8 13.2 98 179-314 179-284 (350)
73 PRK08737 acetylornithine deace 48.6 1.8E+02 0.004 32.0 11.7 112 73-225 7-144 (364)
74 KOG3566 Glycosylphosphatidylin 47.7 80 0.0017 37.3 8.7 40 572-611 466-506 (617)
75 PRK09864 putative peptidase; P 47.3 3.7E+02 0.008 30.1 13.8 96 179-315 176-284 (356)
76 PF01546 Peptidase_M20: Peptid 35.5 1.1E+02 0.0023 29.5 6.6 47 178-224 36-84 (189)
77 PF05343 Peptidase_M42: M42 gl 33.7 1.9E+02 0.0041 31.3 8.7 97 180-315 136-243 (292)
78 KOG2275 Aminoacylase ACY1 and 26.6 7.7E+02 0.017 28.3 12.0 100 94-223 49-176 (420)
79 KOG3946 Glutaminyl cyclase [Po 25.7 6.8E+02 0.015 27.5 10.8 96 93-211 72-179 (338)
80 PF10131 PTPS_related: 6-pyruv 25.2 1.2E+03 0.027 27.9 14.7 33 577-609 104-136 (616)
81 PF01277 Oleosin: Oleosin; In 22.6 6.5E+02 0.014 23.9 8.9 42 571-612 4-45 (118)
82 PRK09961 exoaminopeptidase; Pr 22.4 7.4E+02 0.016 27.4 11.0 99 179-315 167-276 (344)
No 1
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-113 Score=939.17 Aligned_cols=602 Identities=34% Similarity=0.489 Sum_probs=457.5
Q ss_pred cccccchhHHHHHHHHhhcchhHHHHHHHHHHHHHhcc--cCCcccccccccCCCcceeeeccchhHHHHHHHHHHHHhh
Q 005387 7 SKKRKRPIVRLAVLLLSHSVLVSVICCTAGVFGLLLLP--VLAKNTYISENALMPGSASSMLSNQEVSEANKLIKELNNL 84 (699)
Q Consensus 7 ~~~~~r~~~~l~~~l~~~~~~ls~ll~l~Gi~wll~lP--~~~r~TYiSENALlPG~v~~~f~~~~~~~a~~y~~el~~~ 84 (699)
++.|+|+++|+ +.||...++++++++|+.|+++|+ .+.++|||||||||||||++||+..++++++++.+++++.
T Consensus 6 ~~~~~~~~~~l---~~r~ia~lpv~s~v~g~awf~aL~~~pl~~rtyiSEnAlmpg~v~s~~~~~~~~~~~~~~~~~~~~ 82 (617)
T KOG3566|consen 6 DPIRQIPLVRL---LIRHIAHLPVFSYVAGLAWFFALALLPLLKRTYISENALMPGQVYSYFRNRDVSDASKLLKDIKNF 82 (617)
T ss_pred cchhhHHhHHH---HHhhcccchHHHHHHHHHHHHHHhhchhcccceeeccccCccchhhhhhccchhhhHHHHHHHHHH
Confidence 44789999997 667777788888888888888865 4679999999999999999999999999999999999999
Q ss_pred hcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeE
Q 005387 85 HSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAI 164 (699)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEai 164 (699)
+. ..+. .++.|.+..|+++|+|+++|||... |+ .++.|+|||||+|||||||||+|
T Consensus 83 r~-~~s~--~~~~~~~~~~q~FGl~t~~~n~~~~----------------P~-----e~y~G~NvyGilRAPRgdgtEsi 138 (617)
T KOG3566|consen 83 RK-HESQ--VPNAWAEVSMQEFGLETHTQNYSNG----------------PF-----EEYSGENVYGILRAPRGDGTESI 138 (617)
T ss_pred HH-hhcc--cchhHHHHHHHHhCccccccCccCC----------------ch-----hhcCCceEEEEEecCCCCCcceE
Confidence 98 4332 5789999999999999999998642 11 14679999999999999999999
Q ss_pred EEEEeeccCCCCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHhcCCCCCCCcccccccccCC
Q 005387 165 VLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVG 244 (699)
Q Consensus 165 VL~ap~~~~~~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~ 244 (699)
||+|||+..+++ | ..++++++||++|+|||+||||||||||+|+ ++.|++|||++||++.. ... .+..+
T Consensus 139 vl~vP~~~~~~~-~-~~~v~l~lsla~~f~r~~yWsKDII~v~~d~---~~~g~~AwLeaYhd~~s--~~~----~~~ep 207 (617)
T KOG3566|consen 139 VLVVPYGRSSGS-N-SASVALLLSLADYFSRWVYWSKDIIFVFTDG---PALGLDAWLEAYHDILS--LTG----ISVEP 207 (617)
T ss_pred EEEEecccCCCc-c-hhHHHHHHHHHHHhcCCeeecccEEEEEeCC---ccccHHHHHHHhhcccc--ccc----ccccc
Confidence 999999887766 4 5699999999999999999999999999998 78999999999999521 111 12211
Q ss_pred CCCcccccccccccccceeeeeEEeecCCCCCcceEEEEeecCCCCCCchhHHHHHHHHHhhccCceeeEeecccccchh
Q 005387 245 NNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNSK 324 (699)
Q Consensus 245 ~~~~~~~~~~~~~raG~IqaAl~le~~~~~~~~~~l~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~~~l~~~~~~~~~~ 324 (699)
.....|+|+++||+++|+++. .+|+++|.+||+|||||||||||+...++ +|+|+.+++++..
T Consensus 208 --------~~i~~ragal~aal~l~~se~--~~d~v~i~~eglNGqlPNLDlf~i~~~~~-~k~g~~v~l~g~~------ 270 (617)
T KOG3566|consen 208 --------DEIQARAGALAAALVLEVSEK--FQDIVEIQYEGLNGQLPNLDLFNITQIFM-QKEGLLVTLQGKL------ 270 (617)
T ss_pred --------ccccccccceeeEEEEEeccc--cceeEEEEecccCCCCCcchHHHHHHHHH-HhcCceEEEecCc------
Confidence 123379999999999999966 67999999999999999999998877666 4899999998632
Q ss_pred hhhchhhhHhhhhhhhhccCCCcccCCChhhHHHHHHHHHHHHHHhhcCCCCCccccccccccceEEEEeeccccccccc
Q 005387 325 WVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRLD 404 (699)
Q Consensus 325 w~~~~~~i~e~~g~~~~~~~p~~~~~~~~~~Y~~~l~tll~~m~~Qa~G~ptG~Hg~F~~Y~IdAiTL~~~~~~~~~~~~ 404 (699)
.++||..+ ++|.+++++++.+++.||+|+|||+||+|++|||||+|++...+++.+ .
T Consensus 271 ------------------~~~d~~s~---~~~~s~l~tl~~~l~~QA~g~ptg~Hglf~~Y~vdaLTlrr~~~~s~~--~ 327 (617)
T KOG3566|consen 271 ------------------LPLDWHSN---SMYLSGLKTLLLMLLTQASGSPTGIHGLFLRYRVDALTLRRILSDSFK--Q 327 (617)
T ss_pred ------------------CCcccccC---chhhhhHHHHHHHHHHHHhcCCCCccccccccccceEEeccccccccc--c
Confidence 24556533 489999999999999999999999999999999999999655433222 2
Q ss_pred cchhhHHhHHHHHHHHHHhhchhhhhhhcceeeeeeCCCCceEeechhHHHHHHHHhchHHHHHHHHHhhc--CCCCCCc
Q 005387 405 RRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLPVVAASLYAKTL--DLNPTSE 482 (699)
Q Consensus 405 ~~~~~~~~lGr~iE~~~RSlNNLLErlHqSfFfYlL~s~~rFVSIG~Ylpp~~Ll~a~l~i~a~~l~~~~~--~~~~~~~ 482 (699)
.+++ ++++||++|+++||+||||||||||||||+++++.||||||.|||++.++++|+.++|+.+|.+.. +...++.
T Consensus 328 ~~~d-~~~~gkaiEg~fRsLNNLLEr~HQSFF~YlL~~~~~FiSIg~YMpa~~~Lva~l~l~A~~~wi~l~e~~~~l~~~ 406 (617)
T KOG3566|consen 328 YGYD-LVRFGKAIEGMFRSLNNLLERFHQSFFFYLLLDPSRFISIGLYMPALVILVAPLGLKAYFLWINLHEAKIGLESL 406 (617)
T ss_pred cchH-HHHHHHHHHHHHHHHHHHHHHHhhheeeeeecCccceeehHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCCcccc
Confidence 2233 578999999999999999999999999999999999999999999999999999999999999642 2222221
Q ss_pred cCcCCCcccccccccccchhhhHHHHHHHHHHHHHHHhHhHHhhccC-CCCCchhHHHHHH-HHHHHHHHHHHHhhCCCc
Q 005387 483 KDKSATSNELGSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIP-DSDPTTNFSVWIL-LSILSLEILRWILVSPSS 560 (699)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~G~~~~~lp~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~l~~~~~~p~~ 560 (699)
.+ . .....+.+++.-....+...|+.|..+.++|++..+.. .+.|+.....+.. .+.+..+.+...+.++..
T Consensus 407 ~~--~----~~~~~~~~~~~~~~~~~~~~~L~~~~~~ll~~l~~~~~f~~~p~~~~~~l~~~~s~~~~~~~v~~~~~~v~ 480 (617)
T KOG3566|consen 407 AG--H----PYESVPTPVSQDIGLTSVLQWLLGPIVGLLPLLPSQVIFLHIPLGRAIFLVEPLSYLLLIVFVLPFSSLVL 480 (617)
T ss_pred cC--C----cccccccchhhcccchhhhhhHHHHHHHHHHhhhhhhhhccccccccccccchHHHHhhhheeeccccccc
Confidence 10 0 11111223444455566677777777777776544332 1222222211111 111111111111111111
Q ss_pred cccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccchhHHHHHHHHHHHHhhhcCc
Q 005387 561 HIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFP 640 (699)
Q Consensus 561 ~~~~~~~~~~~~lk~~~Ll~~~~~l~~la~lNFsLa~~~al~~vPl~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~p 640 (699)
. +....+|+++|++.++...+.+++++..||+++++.+++.||+|+++.|.++-.|.+..+..+..-+..++..+..|
T Consensus 481 ~--~~~~~n~~ll~lv~~l~~pi~fi~~~~~nf~~~~~aal~~vp~~i~~~~k~~~~r~~l~p~~l~~~~~~l~~si~~~ 558 (617)
T KOG3566|consen 481 P--GLCLTNFALLKLVTILAVPIQFIMTTLSNFASGEFAALLPVPTLIFLEPKIPILRGRLAPLVLQAKWLALVLSIAMT 558 (617)
T ss_pred c--ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHhccCCccccccccHHHHhhHHHHHHHHHhcc
Confidence 1 13345899999999999999999999999999999999999999999887766655555555555555554455556
Q ss_pred hhHH-HHhhhhh-hccccccH-HhHHHHHhhhhhccchhhhhhhhhhHhHHHHHHHHhccC
Q 005387 641 PATF-FVFKGVI-EGFSGINA-GDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHP 698 (699)
Q Consensus 641 ~~~~-~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~v~~p~w~~~~~~~~~~ 698 (699)
+.-. .+.+.++ +...+.|. +.++.|-.+.|.| .|.+++++|+|||++||++.|++
T Consensus 559 ~~~~~~~~~~~~~~~~~gl~~~~~~~s~~~~yg~w---~~~~i~~g~lpcwll~~~~~f~~ 616 (617)
T KOG3566|consen 559 AFDEEPLSKHFFLLCFFGLDIWNMLFSCSMRYGAW---LYFVIGTGSLPCWLLCLDGSFKK 616 (617)
T ss_pred hhhHHHHHHHHHHhHHHhhhhHHHHHHHHHHhhhh---hhhheeccccchhheeecccccC
Confidence 4222 2333333 22355555 2455554454555 69999999999999999999986
No 2
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=100.00 E-value=8.5e-107 Score=910.37 Aligned_cols=486 Identities=38% Similarity=0.565 Sum_probs=365.3
Q ss_pred ccceEEEEEcCCCCCCceeEEEEEeeccCCCCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHH
Q 005387 145 YGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRD 224 (699)
Q Consensus 145 ~G~NvygIlrAPRgdgtEaiVL~ap~~~~~~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~a 224 (699)
+|+|||||+|||||||||||||+|||++.+++.| ..|+++++||+||+||++||||||||||+|+ +..|+||||||
T Consensus 2 ~G~nvy~i~rapR~d~tEaivl~~~~~~~~~~~n-~~~v~l~lal~~~~~~~~~wsKDii~l~~~~---~~~g~~awl~~ 77 (504)
T PF04114_consen 2 SGTNVYGILRAPRGDGTEAIVLVVPWRDSDGEYN-AGGVALALALARYFRRQSYWSKDIIFLFTDD---ELAGMQAWLEA 77 (504)
T ss_pred CceEEEEEEecCCCCCceeEEEEEecCCCCcccc-hhhHHHHHHHHHHhhhchhhhccEEEEecCC---cchHHHHHHHH
Confidence 7999999999999999999999999998887666 6799999999999999999999999999997 67999999999
Q ss_pred hcCCCCCCCcccccccccCCCCCcccccccccccccceeeeeEEeecCCCCCcceEEEEeecCCCCCCchhHHHHHHHHH
Q 005387 225 YHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLA 304 (699)
Q Consensus 225 YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~raG~IqaAl~le~~~~~~~~~~l~I~~eG~NGqLPNLDLiN~v~~ia 304 (699)
||+.+.++... ...+.|+|+||||+++|++++ .+++++|++||.|||||||||||++++++
T Consensus 78 Yh~~~~~~~~~-----------------~~l~~~~G~i~aAl~le~~~~--~~~~v~i~~eG~NGqLPNLDL~N~~~~i~ 138 (504)
T PF04114_consen 78 YHDSNTKGLSS-----------------SPLPLRAGSIQAALVLEYPSD--SFSSVEIKYEGLNGQLPNLDLVNTVVRIA 138 (504)
T ss_pred HhCCCCccccc-----------------cCCCCCCcceeEEEEEEecCC--CccEEEEEEecCCCCCCCchHHHHHHHHH
Confidence 99975322211 124479999999999999987 46779999999999999999999999999
Q ss_pred hhccCceeeEeecccccchhhhhchhhhHhhhhhhhhccCCCcccCCChhhHHHHHHHHHHHHHHhhcCCCCCccccccc
Q 005387 305 VHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRD 384 (699)
Q Consensus 305 ~~~~g~~~~l~~~~~~~~~~w~~~~~~i~e~~g~~~~~~~p~~~~~~~~~~Y~~~l~tll~~m~~Qa~G~ptG~Hg~F~~ 384 (699)
+ ++|++++++.... .++|. +.++|.+++++|+++|.+||+|.|+|+||+|++
T Consensus 139 ~-~~gi~~~~~~~~~------------------------~~~~~---~~~~~~~~l~~l~~~~~~~a~g~p~g~H~~f~~ 190 (504)
T PF04114_consen 139 E-KEGIPMGVSLHLQ------------------------PSDWH---SNSDYESRLKTLLRGMLNQALGGPTGPHGAFLR 190 (504)
T ss_pred H-hcCCCcccccccc------------------------ccccc---cccchHHHHHHHHHHHHHhccCCCCCCchhhhh
Confidence 7 6888776643211 01111 345899999999999999999999999999999
Q ss_pred cccceEEEEeeccccccccccchhhHHhHHHHHHHHHHhhchhhhhhhcceeeeeeCCCCceEeechhHHHHHHHHhchH
Q 005387 385 YQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLVAPLP 464 (699)
Q Consensus 385 Y~IdAiTL~~~~~~~~~~~~~~~~~~~~lGr~iE~~~RSlNNLLErlHqSfFfYlL~s~~rFVSIG~Ylpp~~Ll~a~l~ 464 (699)
||||||||++.+..++ ++++ +.++||++|+++||+||||||||||||||+|++|+||||||+||||+++++++++
T Consensus 191 y~I~aiTl~~~~~~~~---~~~~--~~~~gr~~E~~~RslNNLlE~~HqSff~Yll~~~~~fvsig~Ylp~~~ll~~~~~ 265 (504)
T PF04114_consen 191 YRIDAITLRGVKSTGP---GPHD--FTAFGRILEGIFRSLNNLLERFHQSFFFYLLLSPSRFVSIGTYLPAAVLLAASLL 265 (504)
T ss_pred cCccEEEEecccCCCC---CCcC--HHHHHHHHHHHHHHHHHHHHhHhheeeEeEecCCceEeehHHHHHHHHHHHHHHH
Confidence 9999999987654321 2222 4689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCccCcC--CCccc----ccccccccchhhhHHHHHHHHHHHHHHHhHhHHhhccCCCCC---ch
Q 005387 465 VVAASLYAKTLDLNPTSEKDKS--ATSNE----LGSVLQSWKWLNSVKTVFVVHFWGATVSLLPYFISQIPDSDP---TT 535 (699)
Q Consensus 465 i~a~~l~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~v~~~h~~G~~~~~lp~~~~~~~~~~~---~~ 535 (699)
++|+.+|.+.+......+++++ +.... .........+......+++.|+.|+.++++|....++..... ..
T Consensus 266 i~a~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 345 (504)
T PF04114_consen 266 ISALSLWLKSGASDISLESEYGSSAPSFWFVSLLESFGFSLPFLSVLSPLLVSHLIGFLLFLLPYLGQYIASQHFPSFRL 345 (504)
T ss_pred HHHHHHHHhCCccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhH
Confidence 9999999986532221111111 00000 111111234677788888999999998888755444332111 11
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCCccccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Q 005387 536 NFSVWILLSILSLEILRWILVSPSSHIYGLPQGEWATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHPLKL 615 (699)
Q Consensus 536 ~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~~~~~~lk~~~Ll~~~~~l~~la~lNFsLa~~~al~~vPl~l~~~p~~~ 615 (699)
...++..++++..++ |.... .|+++|.++|+++|++++++|++++++|||||+++|+++||+|++++|.++
T Consensus 346 ~~~~~~~lsl~~l~l-------~~~~~--~~~~~~~llk~~~Ll~~~~~L~~la~lNFSLa~l~all~vPl~~~~~~~~~ 416 (504)
T PF04114_consen 346 ESVVLLYLSLISLLL-------PFRVV--LPPQQWALLKSFSLLLLGMFLSALATLNFSLAFLVALLLVPLCFIPRPSKQ 416 (504)
T ss_pred HHHHHHHHHHHHHHh-------ccccc--CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceecccCCcc
Confidence 122233333311111 32111 355799999999999999999999999999999999999999998887654
Q ss_pred ccccch-hHHHHH-----HHHHHHHhhhcCchhHHHHhhhhhhccccccHHhHHHHHhhh-hhccchhhhhhhhhhHhHH
Q 005387 616 DVRGQS-LRSILR-----MICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESL-WAWNSATYLYIGMVHLPCW 688 (699)
Q Consensus 616 ~~~~~~-~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~~p~w 688 (699)
+...++ ++..+. .++++++.++.+|+......+...+ .+.... +.++.+.++ |+||+|||++|||||||||
T Consensus 417 ~s~~r~~~~~a~L~l~~~~v~~l~ll~ls~~~~~~~~~~~~~~-~~~~~~-~~l~~~v~~~~v~G~Wt~~vv~lv~lP~W 494 (504)
T PF04114_consen 417 RSTLRSSLRSAVLLLNPPAVVLLVLLFLSFPFFPELLLKLFLD-GWQAVM-DALTFAVFDWWVYGNWTFFVVCLVWLPCW 494 (504)
T ss_pred hhhhhHHHHHHHhcccchHHHHHHHHHhhcchHHHHHHHHHhh-hhhhHH-HHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 411222 122211 1333444455556655544442222 232233 445554555 5999999999999999999
Q ss_pred HHHHHHhcc
Q 005387 689 VLCVQILLH 697 (699)
Q Consensus 689 ~~~~~~~~~ 697 (699)
++||+++|.
T Consensus 495 ll~w~i~f~ 503 (504)
T PF04114_consen 495 LLCWNILFW 503 (504)
T ss_pred HHHHHHHcc
Confidence 999999984
No 3
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=98.47 E-value=1.2e-05 Score=87.76 Aligned_cols=118 Identities=13% Similarity=0.223 Sum_probs=86.9
Q ss_pred cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 93 ~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
...++||+++|+++|+++..|.|+.+- . +..... ..+ .....|.||+|.++. .+.|.++++++||+
T Consensus 55 ~~aA~yL~~~f~~lG~~v~~q~f~~~~---~----~~~~~g---~~~-~~~~~g~nVIa~~~G---~~~~~Ill~AH~DT 120 (346)
T PRK10199 55 MLSADYLRQQFQQMGYQSDIRTFNSRY---I----YTARDN---RKN-WHNVTGSTVIAAHEG---KAPQQIIIMAHLDT 120 (346)
T ss_pred HHHHHHHHHHHHHCCCceEeeeccccc---e----eecccc---ccc-ccCCccceEEEEECC---CCCCeEEEEEEcCc
Confidence 357999999999999999988876420 0 000000 011 113578999999854 44589999999987
Q ss_pred CC-----------------CCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHh
Q 005387 173 VK-----------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 173 ~~-----------------~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aY 225 (699)
.. +..+++.|++.+|.+++.|++.. ..++|.|+++++++....|.++|++..
T Consensus 121 V~p~~~~~~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~~-~~~~I~fv~~~~EE~Gl~GS~~~~~~~ 189 (346)
T PRK10199 121 YAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAERLKNVP-TEYGIRFVATSGEEEGKLGAENLLKRM 189 (346)
T ss_pred CCCCCCCccccCCCCcccCCccccHHHHHHHHHHHHHHhhCC-CCCcEEEEEECCcccCcHHHHHHHHhc
Confidence 42 33455689999999999998766 478999999887776789999999863
No 4
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.79 E-value=0.011 Score=70.58 Aligned_cols=155 Identities=17% Similarity=0.236 Sum_probs=96.9
Q ss_pred CCcccccccccCCCcceeeeccchhHHHHHHHHHHHHhhhcCCCCCc---cchHHHHHHHHHHcCC---------ceeee
Q 005387 46 LAKNTYISENALMPGSASSMLSNQEVSEANKLIKELNNLHSNPLGAT---TESHGIIAKYMSNLGA---------QVNNH 113 (699)
Q Consensus 46 ~~r~TYiSENALlPG~v~~~f~~~~~~~a~~y~~el~~~~~~~~~~~---~~~~~~l~~~l~~lGl---------e~~~q 113 (699)
+.++....+.+..|+| | +..+|.+-..++...-.++.++. ....+++.+++.++.- |+..|
T Consensus 38 ~~~pl~~~~e~~~~~~----f---~~~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q 110 (834)
T KOG2194|consen 38 LPEPLTQPQEQTLPSQ----F---SEARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQ 110 (834)
T ss_pred ccccCCCcchhcCchh----h---HHHHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheecee
Confidence 4566666666666655 2 23345555566666544432221 1245667666666543 33333
Q ss_pred ccccCCccCCCcccccCCCCCccccCCccc-cccceEEEEEcCCCCCCceeEEEEEeeccCC---CCccchhhHHHHHHH
Q 005387 114 KFHPQLNQFHPLHFFSGPDSGVMQENSTRS-LYGINTVGIIRAPRGDGKEAIVLVTPYNAVK---GGVRETLSLGIAYSV 189 (699)
Q Consensus 114 ~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~-~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~---~~~~~~~sval~LaL 189 (699)
.... .+ ..++.+.. ...+||.--+-.--++.++++++.+.||+.- +..++..+|+.+|.+
T Consensus 111 ~~sg---------------~~-~~~~~~~~Y~~i~NIvVki~~k~~~~~~~lLlnaHfDSvpt~~gAtDDg~~va~mLe~ 174 (834)
T KOG2194|consen 111 SASG---------------SF-ILEGMTLVYQNISNIVVKISPKNGNDKNALLLNAHFDSVPTGPGATDDGSGVASMLEA 174 (834)
T ss_pred eccc---------------ee-eehhhhheeeeeeeEEEecCCCCCCccceeeeeccccccCCCCCCCcchhHHHHHHHH
Confidence 2211 11 01111111 3677887777777777788999999998753 334567899999999
Q ss_pred HHHHh-cCCccccceEEEeeCCCCCCchhHHHHHH
Q 005387 190 FSLLT-RVTWLAKDIIWLVADSQYGEYAPVAAWLR 223 (699)
Q Consensus 190 a~yl~-r~~~wAKDIIfl~~D~~~g~~~G~~AWL~ 223 (699)
+|++. +..-.-+||||||-+.++....|.++|..
T Consensus 175 lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FIt 209 (834)
T KOG2194|consen 175 LRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFIT 209 (834)
T ss_pred HHHhhcCCCcccccEEEEecCcccchhhhccccee
Confidence 99986 45667999999999887666777777754
No 5
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=96.68 E-value=0.0047 Score=60.49 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=50.2
Q ss_pred eeEEEEEeeccCC---------CCccchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCCCchhHHHHHHHhc
Q 005387 162 EAIVLVTPYNAVK---------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 162 EaiVL~ap~~~~~---------~~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g~~~G~~AWL~aYH 226 (699)
|.|||.++||+.. +..+++.|++++|.+||.|++.+ =..|+|+|++.|+++....|.++|++..+
T Consensus 1 e~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~~~ 75 (179)
T PF04389_consen 1 EYIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEHDH 75 (179)
T ss_dssp EEEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHHHH
T ss_pred CEEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHhhh
Confidence 7899999998832 23345789999999999998732 22789999999987777899999999433
No 6
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=96.18 E-value=0.08 Score=59.15 Aligned_cols=125 Identities=15% Similarity=0.175 Sum_probs=80.7
Q ss_pred HHHHHHHHHHhhhcCCCCC--ccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEE
Q 005387 73 EANKLIKELNNLHSNPLGA--TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~--~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvy 150 (699)
.+.++.+++-+....+... .....+||+++|+++|+++..+... ...+.|++
T Consensus 38 ~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~--------------------------~~~~~~li 91 (410)
T PRK06133 38 AYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTP--------------------------PSAGDMVV 91 (410)
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccC--------------------------CCCCCeEE
Confidence 3444455554444332211 1246899999999999998755321 11357999
Q ss_pred EEEcCCCCCCceeEEEEEeeccCCC--------------------CccchhhHHHHHHHHHHHhcCCc-cccceEEEeeC
Q 005387 151 GIIRAPRGDGKEAIVLVTPYNAVKG--------------------GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVAD 209 (699)
Q Consensus 151 gIlrAPRgdgtEaiVL~ap~~~~~~--------------------~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D 209 (699)
|.+... +.-.|++.+++|.... ..+...+++.+++.++++++... ...||.|+|+-
T Consensus 92 a~~~g~---~~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 168 (410)
T PRK06133 92 ATFKGT---GKRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNP 168 (410)
T ss_pred EEECCC---CCceEEEEeecCccCCCCccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEC
Confidence 998542 2246999998876421 11234578888988999987654 35799999963
Q ss_pred CCCCCchhHHHHHHHhc
Q 005387 210 SQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 210 ~~~g~~~G~~AWL~aYH 226 (699)
+++....|++.+++++.
T Consensus 169 dEE~g~~G~~~~~~~~~ 185 (410)
T PRK06133 169 DEETGSPGSRELIAELA 185 (410)
T ss_pred CcccCCccHHHHHHHHh
Confidence 33333468999998864
No 7
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=95.87 E-value=0.08 Score=57.65 Aligned_cols=122 Identities=11% Similarity=0.093 Sum_probs=78.8
Q ss_pred HHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcC
Q 005387 76 KLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRA 155 (699)
Q Consensus 76 ~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrA 155 (699)
+..++|-+....+.+ ..+..+||.++|+++|+++..+.... ....+.|+++.++.
T Consensus 4 ~~~~~l~~i~s~s~~-e~~~~~~l~~~l~~~g~~~~~~~~~~------------------------~~~~~~~~~~~~~g 58 (361)
T TIGR01883 4 KYFLELIQIDSESGK-EKAILTYLKKQITKLGIPVSLDEVPA------------------------EVSNDNNLIARLPG 58 (361)
T ss_pred HHHHHHeecCCCCCc-HHHHHHHHHHHHHHcCCEEEEecccc------------------------ccCCCceEEEEEeC
Confidence 334455544443322 33678999999999999987654210 01246799999964
Q ss_pred CCCCCceeEEEEEeeccCCC-----------------C----ccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCC
Q 005387 156 PRGDGKEAIVLVTPYNAVKG-----------------G----VRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGE 214 (699)
Q Consensus 156 PRgdgtEaiVL~ap~~~~~~-----------------~----~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~ 214 (699)
. ++...|++.+..|.... . .+...+++.+|..++++++..-...+|.|+++-+++..
T Consensus 59 ~--~~~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~~~~~~v~~~~~~~EE~g 136 (361)
T TIGR01883 59 T--VKFDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEETPHGTIEFIFTVKEELG 136 (361)
T ss_pred C--CCCCcEEEEeeccccCCCCCCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccC
Confidence 3 22257999998865321 1 13346888889888988765445679999996333334
Q ss_pred chhHHHHHHH
Q 005387 215 YAPVAAWLRD 224 (699)
Q Consensus 215 ~~G~~AWL~a 224 (699)
..|++.|++.
T Consensus 137 ~~G~~~~~~~ 146 (361)
T TIGR01883 137 LIGMRLFDES 146 (361)
T ss_pred chhHhHhChh
Confidence 5688888654
No 8
>PRK08596 acetylornithine deacetylase; Validated
Probab=95.84 E-value=0.11 Score=58.21 Aligned_cols=125 Identities=18% Similarity=0.194 Sum_probs=80.2
Q ss_pred HHHHHHHHHHhhhcCCC--CCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEE
Q 005387 73 EANKLIKELNNLHSNPL--GATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~--~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvy 150 (699)
.+.++.++|-+....+. ....+..++|+++|+++|+++..+... -.+.|++
T Consensus 14 ~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~---------------------------~~~~nvi 66 (421)
T PRK08596 14 ELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVY---------------------------PNDPNVV 66 (421)
T ss_pred HHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEcc---------------------------CCCceEE
Confidence 44555556655554332 122356899999999999987665321 0236999
Q ss_pred EEEcCCCCCCceeEEEEEeeccCCC------------------------CccchhhHHHHHHHHHHHhcCC-ccccceEE
Q 005387 151 GIIRAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVT-WLAKDIIW 205 (699)
Q Consensus 151 gIlrAPRgdgtEaiVL~ap~~~~~~------------------------~~~~~~sval~LaLa~yl~r~~-~wAKDIIf 205 (699)
+.++.-..++...++|..++|.... ..+...+++.++..++.+++.. -+.+||+|
T Consensus 67 a~~~g~~~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~ 146 (421)
T PRK08596 67 GVKKGTESDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIF 146 (421)
T ss_pred EEecCCCCCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 9986421222346999998875211 1122467888888888887654 36789999
Q ss_pred EeeCCCCCCchhHHHHHHH
Q 005387 206 LVADSQYGEYAPVAAWLRD 224 (699)
Q Consensus 206 l~~D~~~g~~~G~~AWL~a 224 (699)
+++-+++....|++.+++.
T Consensus 147 ~~~~dEE~g~~G~~~~~~~ 165 (421)
T PRK08596 147 QSVIGEEVGEAGTLQCCER 165 (421)
T ss_pred EEEeccccCCcCHHHHHhc
Confidence 9964433334689888875
No 9
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=95.84 E-value=0.069 Score=59.42 Aligned_cols=100 Identities=15% Similarity=0.083 Sum_probs=72.6
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+.++||.++|+++|+++..+. . .|++|.++.... +...+++..++|..
T Consensus 32 ~~~~~l~~~~~~~G~~~~~~~------------------------------~-~nl~a~~~g~~~-~~~~l~~~~H~DtV 79 (401)
T TIGR01879 32 EAQDLFKKRMRAAGLEVRFDE------------------------------V-GNLIGRKEGTEP-PLEVVLSGSHIDTV 79 (401)
T ss_pred HHHHHHHHHHHHCCCEEEEec------------------------------C-CcEEEEecCCCC-CCCEEEEecccccC
Confidence 468999999999999986321 1 399999965221 23689999888876
Q ss_pred C--CCccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCC-----CchhHHHHHHHh
Q 005387 174 K--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAWLRDY 225 (699)
Q Consensus 174 ~--~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g-----~~~G~~AWL~aY 225 (699)
. +..+...|++.++..++.+++... ..+||+|+++-++++ ...|.+.|+...
T Consensus 80 ~~gg~~dg~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~ 139 (401)
T TIGR01879 80 VNGGNFDGQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLA 139 (401)
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhccc
Confidence 3 223345688888999999987654 689999999644433 457888887654
No 10
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=95.62 E-value=0.094 Score=56.95 Aligned_cols=104 Identities=15% Similarity=0.094 Sum_probs=72.1
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..++|+++|+++|+++..+.... ...+.|+++.+.. .+...|+|.++.|..
T Consensus 19 ~~~~~l~~~l~~~G~~~~~~~~~~-------------------------~~~~~nl~~~~~~---~~~~~i~l~~H~Dtv 70 (364)
T TIGR01892 19 DLIDWAQAYLEALGFSVEVQPFPD-------------------------GAEKSNLVAVIGP---SGAGGLALSGHTDVV 70 (364)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCC-------------------------CCccccEEEEecC---CCCCeEEEEcccccc
Confidence 678999999999999987654210 1136799998843 234579998877542
Q ss_pred CC-----------------------CccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHhc
Q 005387 174 KG-----------------------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 174 ~~-----------------------~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aYH 226 (699)
.. ..+...+++.+|+.++++++.. +.++|.|+|+-+++....|++..++++.
T Consensus 71 p~~~~~w~~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~v~~~~~~~EE~g~~G~~~~~~~~~ 145 (364)
T TIGR01892 71 PYDDAAWTRDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAEQ-LKKPLHLALTADEEVGCTGAPKMIEAGA 145 (364)
T ss_pred cCCCCcCCCCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhcC-cCCCEEEEEEeccccCCcCHHHHHHhcC
Confidence 11 0122457888899999998765 4889999996333323469999988764
No 11
>PRK09133 hypothetical protein; Provisional
Probab=95.43 E-value=0.23 Score=56.49 Aligned_cols=129 Identities=21% Similarity=0.201 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHhhhcCCC-CCccchHHHHHHHHHHcCCceeeec-cccCCccCCCcccccCCCCCccccCCccccccce
Q 005387 71 VSEANKLIKELNNLHSNPL-GATTESHGIIAKYMSNLGAQVNNHK-FHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGIN 148 (699)
Q Consensus 71 ~~~a~~y~~el~~~~~~~~-~~~~~~~~~l~~~l~~lGle~~~q~-f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~N 148 (699)
.+++.++.++|-+....+. +...+..+||.++|+++|+++.... +.. .....|
T Consensus 36 ~~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~-------------------------~~~~~n 90 (472)
T PRK09133 36 QQAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGP-------------------------YPRKGN 90 (472)
T ss_pred HHHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccC-------------------------CCCcee
Confidence 3345555666655555431 2233578999999999999864322 110 113579
Q ss_pred EEEEEcCCCCCCceeEEEEEeeccCC-----------------------CCccchhhHHHHHHHHHHHhcCC-ccccceE
Q 005387 149 TVGIIRAPRGDGKEAIVLVTPYNAVK-----------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDII 204 (699)
Q Consensus 149 vygIlrAPRgdgtEaiVL~ap~~~~~-----------------------~~~~~~~sval~LaLa~yl~r~~-~wAKDII 204 (699)
+++.++.+. +...++|..++|..- +..+...+++..+..++++++.. -..++|.
T Consensus 91 li~~~~g~~--~~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~ 168 (472)
T PRK09133 91 LVARLRGTD--PKKPILLLAHMDVVEAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDII 168 (472)
T ss_pred EEEEecCCC--CCCcEEEEeecccCCCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEE
Confidence 999997542 225799988776421 11234568888888888887654 3467999
Q ss_pred EEeeCCCC-CCchhHHHHHHHhc
Q 005387 205 WLVADSQY-GEYAPVAAWLRDYH 226 (699)
Q Consensus 205 fl~~D~~~-g~~~G~~AWL~aYH 226 (699)
|+++-+++ ++..|++..++++.
T Consensus 169 ~~~~~dEE~~g~~G~~~l~~~~~ 191 (472)
T PRK09133 169 LALTGDEEGTPMNGVAWLAENHR 191 (472)
T ss_pred EEEECccccCccchHHHHHHHHh
Confidence 99975544 55679999988764
No 12
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=95.36 E-value=0.2 Score=54.96 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=77.3
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
+.++.++|-+....+.+ .....++|.++|+++|+++..+.+. ..+.|+++.+
T Consensus 4 ~~~~l~~Lv~i~s~s~~-e~~~~~~l~~~l~~~G~~~~~~~~~---------------------------~~~~~l~a~~ 55 (377)
T PRK08588 4 KIQILADIVKINSVNDN-EIEVANYLQDLFAKHGIESKIVKVN---------------------------DGRANLVAEI 55 (377)
T ss_pred HHHHHHHHhcCCCCCCc-HHHHHHHHHHHHHHCCCceEEEecC---------------------------CCCceEEEEe
Confidence 44556666666554433 3467899999999999987654311 1357999887
Q ss_pred cCCCCCCceeEEEEEeeccCCCC------------------------ccchhhHHHHHHHHHHHhcC-CccccceEEEee
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVA 208 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~~------------------------~~~~~sval~LaLa~yl~r~-~~wAKDIIfl~~ 208 (699)
+. +...|++.+++|....+ .+...+++.++..++.+++. ..+.+||.|+++
T Consensus 56 g~----~~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~ 131 (377)
T PRK08588 56 GS----GSPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLAT 131 (377)
T ss_pred CC----CCceEEEEeeecccCCCCcccCcCCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEE
Confidence 32 23689998887653210 12234677776666777654 356899999996
Q ss_pred CCCCCCchhHHHHHHH
Q 005387 209 DSQYGEYAPVAAWLRD 224 (699)
Q Consensus 209 D~~~g~~~G~~AWL~a 224 (699)
-+++....|++.++++
T Consensus 132 ~dEE~g~~G~~~~~~~ 147 (377)
T PRK08588 132 AGEEVGELGAKQLTEK 147 (377)
T ss_pred cccccCchhHHHHHhc
Confidence 4433334799999886
No 13
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=95.21 E-value=0.15 Score=56.81 Aligned_cols=100 Identities=13% Similarity=0.132 Sum_probs=70.3
Q ss_pred cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 93 ~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
....+||.++|++.|+++..+ .+.|+++.+..... +...+++..++|.
T Consensus 38 ~~~~~~l~~~l~~~G~~~~~~-------------------------------~~~nlia~~~g~~~-~~~~l~~~~H~Dt 85 (414)
T PRK12890 38 RAARALLAAWMRAAGLEVRRD-------------------------------AAGNLFGRLPGRDP-DLPPLMTGSHLDT 85 (414)
T ss_pred HHHHHHHHHHHHHCCCEEEEc-------------------------------CCCcEEEEeCCCCC-CCCEEEEeCcccC
Confidence 357899999999999987532 12499999964322 3357999999987
Q ss_pred CC--CCccchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCC-----CchhHHHHHHH
Q 005387 173 VK--GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYG-----EYAPVAAWLRD 224 (699)
Q Consensus 173 ~~--~~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g-----~~~G~~AWL~a 224 (699)
.- +..+...|++.+++.++.+++.. -+.+||+|+++-++++ ...|.+++.+.
T Consensus 86 Vp~~g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~ 145 (414)
T PRK12890 86 VPNGGRYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGT 145 (414)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcc
Confidence 63 22344668988898889887654 3589999999744332 23677666554
No 14
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=95.04 E-value=0.22 Score=55.78 Aligned_cols=96 Identities=9% Similarity=0.112 Sum_probs=67.8
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+.++||.++|++.|+++.+.. .| |++|.+... +.+.-.+++..++|..
T Consensus 41 ~~~~~l~~~l~~~G~~v~~~~------------------------------~g-Nl~a~~~g~-~~~~~~l~~~~H~DtV 88 (414)
T PRK12891 41 EARDLFVAWARDAGCTVRVDA------------------------------MG-NLFARRAGR-DPDAAPVMTGSHADSQ 88 (414)
T ss_pred HHHHHHHHHHHHCCCEEEECC------------------------------CC-CEEEEecCC-CCCCCeEEEEecccCC
Confidence 468999999999999987421 23 999998542 2234689999999875
Q ss_pred C--CCccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCCC-----chhHHHH
Q 005387 174 K--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGE-----YAPVAAW 221 (699)
Q Consensus 174 ~--~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g~-----~~G~~AW 221 (699)
- +..+...||+.++..++.+++... +.+||.++++-++++. ..|..+|
T Consensus 89 p~gg~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~ 144 (414)
T PRK12891 89 PTGGRYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVF 144 (414)
T ss_pred CCCccccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHH
Confidence 3 223446799999999999986543 5889999996433331 3466644
No 15
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=94.99 E-value=0.17 Score=56.22 Aligned_cols=99 Identities=12% Similarity=0.090 Sum_probs=70.7
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..+||+++|+++|+++.+.. . .|+++.++..+ ++ -.+++..+.|..
T Consensus 40 ~~~~~l~~~l~~~G~~~~~~~------------------------------~-~nl~a~~~g~~-~~-~~l~l~gH~DtV 86 (412)
T PRK12892 40 AARRRLAAWCEAAGLAVRIDG------------------------------I-GNVFGRLPGPG-PG-PALLVGSHLDSQ 86 (412)
T ss_pred HHHHHHHHHHHHcCCEEEEcC------------------------------C-CcEEEEecCCC-CC-CeEEEEccccCC
Confidence 467999999999999875311 1 29999986532 22 469999999875
Q ss_pred CC--CccchhhHHHHHHHHHHHhcCC-ccccceEEEee-CCCCC----CchhHHHHHHHh
Q 005387 174 KG--GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA-DSQYG----EYAPVAAWLRDY 225 (699)
Q Consensus 174 ~~--~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~-D~~~g----~~~G~~AWL~aY 225 (699)
.. ..+...|++.++..++.+++.. -+.+||+|+++ |-+.+ ...|.+++++++
T Consensus 87 p~~g~~dg~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~ 146 (412)
T PRK12892 87 NLGGRYDGALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRL 146 (412)
T ss_pred CCCCcccchHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCC
Confidence 32 1223457888888899998654 36889999996 54322 457999998644
No 16
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=94.87 E-value=0.22 Score=55.64 Aligned_cols=100 Identities=11% Similarity=0.087 Sum_probs=69.5
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..+||+++|+++|+++..+ ...|+++.++.. +.+...+++..++|..
T Consensus 38 ~~a~~l~~~l~~~g~~~~~~-------------------------------~~~nl~a~~~g~-~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 38 QARDLFAEWMEAAGLTVRVD-------------------------------AVGNLFGRLEGR-DPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHHHcCCEEEEc-------------------------------CCCcEEEEecCC-CCCCCEEEEecCccCC
Confidence 45899999999999987632 124899999541 1123579999999875
Q ss_pred CC--CccchhhHHHHHHHHHHHhcCCc-cccceEEEee-CCCCC----CchhHHHHHHHh
Q 005387 174 KG--GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVA-DSQYG----EYAPVAAWLRDY 225 (699)
Q Consensus 174 ~~--~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~-D~~~g----~~~G~~AWL~aY 225 (699)
.. ..+...|++.+++.++.+++... +.+||+|+++ |-+.| +..|.+++++.|
T Consensus 86 p~~g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~ 145 (413)
T PRK09290 86 PNGGRFDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGAL 145 (413)
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHccc
Confidence 32 22335688888888888886544 5789999996 43322 345788887543
No 17
>PRK05111 acetylornithine deacetylase; Provisional
Probab=94.64 E-value=0.45 Score=52.24 Aligned_cols=122 Identities=12% Similarity=0.096 Sum_probs=76.3
Q ss_pred HHHHHHHHHhhhcCCCCC------ccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccc
Q 005387 74 ANKLIKELNNLHSNPLGA------TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~------~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~ 147 (699)
..++.++|-+...-+... .....+||.++|+++|+++..+.... ...+.
T Consensus 7 ~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------------------------~~~~~ 61 (383)
T PRK05111 7 FIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPG-------------------------TRGKF 61 (383)
T ss_pred HHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCC-------------------------CCCCc
Confidence 445556665555433221 12368999999999999877653210 11347
Q ss_pred eEEEEEcCCCCCCceeEEEEEeeccCCC-----------------------CccchhhHHHHHHHHHHHhcCCccccceE
Q 005387 148 NTVGIIRAPRGDGKEAIVLVTPYNAVKG-----------------------GVRETLSLGIAYSVFSLLTRVTWLAKDII 204 (699)
Q Consensus 148 NvygIlrAPRgdgtEaiVL~ap~~~~~~-----------------------~~~~~~sval~LaLa~yl~r~~~wAKDII 204 (699)
|++|.+.. +.+.+++..++|.... ..+...+++.+++.++.+++.. ..+||+
T Consensus 62 nvia~~g~----~~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~i~ 136 (383)
T PRK05111 62 NLLASLGS----GEGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLTK-LKKPLY 136 (383)
T ss_pred eEEEEeCC----CCCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhcC-CCCCeE
Confidence 99999732 2235888776654210 0122346777888888887654 478999
Q ss_pred EEeeCCCCCCchhHHHHHHHh
Q 005387 205 WLVADSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 205 fl~~D~~~g~~~G~~AWL~aY 225 (699)
|+++-+++....|++..++++
T Consensus 137 ~~~~~~EE~g~~G~~~~~~~~ 157 (383)
T PRK05111 137 ILATADEETSMAGARAFAEAT 157 (383)
T ss_pred EEEEeccccCcccHHHHHhcC
Confidence 999644333346999999865
No 18
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=94.42 E-value=0.44 Score=53.01 Aligned_cols=100 Identities=12% Similarity=0.098 Sum_probs=68.7
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
...+||.++|+++|+++..+. ..|+++.++... .+...++|..++|..
T Consensus 41 ~~~~~l~~~l~~~G~~~~~~~-------------------------------~~n~~a~~~g~~-~~~~~l~l~~H~DtV 88 (412)
T PRK12893 41 EARDLLAQWMEEAGLTVSVDA-------------------------------IGNLFGRRAGTD-PDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHHHcCCEEEEcC-------------------------------CCcEEEEeCCCC-CCCCEEEEEecccCC
Confidence 357999999999999886321 128999885421 123579999999875
Q ss_pred CC--CccchhhHHHHHHHHHHHhcCCc-cccceEEEee-CCCCC----CchhHHHHHHHh
Q 005387 174 KG--GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVA-DSQYG----EYAPVAAWLRDY 225 (699)
Q Consensus 174 ~~--~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~-D~~~g----~~~G~~AWL~aY 225 (699)
-. ..+...|++.+|..++.+++... +.+||+|+++ |-+.+ ...|...+.+++
T Consensus 89 p~~g~~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~ 148 (412)
T PRK12893 89 PTGGRFDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGAL 148 (412)
T ss_pred CCCCcccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcC
Confidence 32 12334688888988999987654 6889999996 43222 145777666543
No 19
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=94.33 E-value=0.6 Score=51.03 Aligned_cols=120 Identities=13% Similarity=0.055 Sum_probs=73.5
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
+.++.++|-+....+.. ..+..++|.++|+++|+++..+.. . ...|+++..
T Consensus 4 ~~~~l~~Lv~ips~s~~-e~~~~~~l~~~l~~~G~~~~~~~~---------------------------~-~~~n~~~~~ 54 (375)
T PRK13009 4 VLELAQDLIRRPSVTPD-DAGCQDLLAERLEALGFTCERMDF---------------------------G-DVKNLWARR 54 (375)
T ss_pred HHHHHHHHhCCCCCCCc-hhhHHHHHHHHHHHcCCeEEEecc---------------------------C-CCcEEEEEe
Confidence 34455566555554333 235789999999999998764421 0 125888875
Q ss_pred cCCCCCCceeEEEEEeeccCCCC------------------------ccchhhHHHHHHHHHHHhcC-CccccceEEEee
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVA 208 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~~------------------------~~~~~sval~LaLa~yl~r~-~~wAKDIIfl~~ 208 (699)
. .+...+++..++|....+ .+...+++.++..++.+++. .=+.+||+|+++
T Consensus 55 -g---~~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~ 130 (375)
T PRK13009 55 -G---TEGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLIT 130 (375)
T ss_pred -c---CCCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEE
Confidence 2 234579999888763211 12234667666666666533 335789999996
Q ss_pred -CCCCCCchhHHHHHHHhc
Q 005387 209 -DSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 209 -D~~~g~~~G~~AWL~aYH 226 (699)
|.+.+...|++..++.+.
T Consensus 131 ~~EE~~~~~G~~~~~~~~~ 149 (375)
T PRK13009 131 SDEEGPAINGTVKVLEWLK 149 (375)
T ss_pred eecccccccCHHHHHHHHH
Confidence 433233458888887653
No 20
>PRK07906 hypothetical protein; Provisional
Probab=94.32 E-value=0.37 Score=53.90 Aligned_cols=105 Identities=13% Similarity=0.148 Sum_probs=70.5
Q ss_pred cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 93 ~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
.+..+||.++|+++|+++..+.- .....|+++.++.. ..+...+++..++|.
T Consensus 25 ~~~~~~l~~~l~~~G~~~~~~~~---------------------------~~~~~nv~~~~~g~-~~~~~~lll~~H~Dt 76 (426)
T PRK07906 25 REAAEYVAEKLAEVGLEPTYLES---------------------------APGRANVVARLPGA-DPSRPALLVHGHLDV 76 (426)
T ss_pred HHHHHHHHHHHHhCCCCeEEeec---------------------------CCCceEEEEEEeCC-CCCCCcEEEEccccc
Confidence 35789999999999999765421 01246999988642 123457888777654
Q ss_pred CCC-----------------------CccchhhHHHHHHHHHHHhcCC-ccccceEEEee-CCCCCCchhHHHHHHHh
Q 005387 173 VKG-----------------------GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA-DSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 173 ~~~-----------------------~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~-D~~~g~~~G~~AWL~aY 225 (699)
... ..+...+++.++..++++++.. -..++|.|+++ |.+.+...|++..++++
T Consensus 77 Vp~~~~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~ 154 (426)
T PRK07906 77 VPAEAADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNH 154 (426)
T ss_pred CCCCcccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHH
Confidence 321 1122357888899999987654 34679999995 54433446888888765
No 21
>PRK08652 acetylornithine deacetylase; Provisional
Probab=94.18 E-value=0.48 Score=51.07 Aligned_cols=115 Identities=17% Similarity=0.136 Sum_probs=73.2
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
+.++.++|-+....+.+ ..+..+||.++|+++|+++..+.. . ...|+++
T Consensus 4 ~~~~~~~lv~ips~s~~-e~~~~~~l~~~l~~~G~~v~~~~~---------------------------~-~~~~~~~-- 52 (347)
T PRK08652 4 AKELLKQLVKIPSPSGQ-EDEIALHIMEFLESLGYDVHIESD---------------------------G-EVINIVV-- 52 (347)
T ss_pred HHHHHHHHhcCCCCCCc-hHHHHHHHHHHHHHcCCEEEEEec---------------------------C-ceeEEEc--
Confidence 45666677666655443 346789999999999999764320 0 0234443
Q ss_pred cCCCCCCceeEEEEEeeccCC---------------CCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhH
Q 005387 154 RAPRGDGKEAIVLVTPYNAVK---------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPV 218 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~---------------~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~ 218 (699)
+.+ -.+++.+.+|... +..+...+++.++..++.+++.. -..||+|+++-+++....|+
T Consensus 53 ----~~~-~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~v~~~~~~dEE~g~~G~ 126 (347)
T PRK08652 53 ----NSK-AELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKGGVAAILLALEELGKEF-EDLNVGIAFVSDEEEGGRGS 126 (347)
T ss_pred ----CCC-CEEEEEccccccCCCCCCEEECCEEEeccchhhhHHHHHHHHHHHHHhhcc-cCCCEEEEEecCcccCChhH
Confidence 222 3688888876532 22233567888888888887432 24599999964443334699
Q ss_pred HHHHHHh
Q 005387 219 AAWLRDY 225 (699)
Q Consensus 219 ~AWL~aY 225 (699)
+++++++
T Consensus 127 ~~~~~~~ 133 (347)
T PRK08652 127 ALFAERY 133 (347)
T ss_pred HHHHHhc
Confidence 9999875
No 22
>PRK07522 acetylornithine deacetylase; Provisional
Probab=94.05 E-value=0.74 Score=50.53 Aligned_cols=123 Identities=11% Similarity=0.040 Sum_probs=78.9
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+....+.+...+..++|.++|+++|+++..+.-. .-.+.|++|.+
T Consensus 6 ~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~--------------------------~~~~~nv~a~~ 59 (385)
T PRK07522 6 SLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDP--------------------------EGDKANLFATI 59 (385)
T ss_pred HHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecC--------------------------CCCcccEEEEe
Confidence 4566666666665443322367899999999999997654210 01347899987
Q ss_pred cCCCCCCceeEEEEEeeccCCC-----------------------CccchhhHHHHHHHHHHHhcCCccccceEEEeeCC
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKG-----------------------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADS 210 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~-----------------------~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~ 210 (699)
+. +..-.+++.++.|.... ..+...+++.++..++.+++.. +.++|.|+|+-+
T Consensus 60 ~~---~~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~i~~~~~~d 135 (385)
T PRK07522 60 GP---ADRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAAP-LRRPLHLAFSYD 135 (385)
T ss_pred CC---CCCCeEEEEeecccccCCCCCCCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhCC-CCCCEEEEEEec
Confidence 42 12246898888764210 0122356888888888887765 478999999533
Q ss_pred CCCCchhHHHHHHHhc
Q 005387 211 QYGEYAPVAAWLRDYH 226 (699)
Q Consensus 211 ~~g~~~G~~AWL~aYH 226 (699)
++....|++..++++.
T Consensus 136 EE~g~~G~~~l~~~~~ 151 (385)
T PRK07522 136 EEVGCLGVPSMIARLP 151 (385)
T ss_pred cccCCccHHHHHHHhh
Confidence 3222469999988654
No 23
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=93.92 E-value=0.46 Score=54.27 Aligned_cols=117 Identities=13% Similarity=0.137 Sum_probs=74.2
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+.... ++...+..+|+.++|+++|+++.... ..|+++.+
T Consensus 6 ~~~~l~~l~~i~s~-s~~e~~~~~~l~~~l~~~G~~~~~~~-------------------------------~~n~~~~~ 53 (477)
T TIGR01893 6 VFKYFEEISKIPRP-SKNEKEVSNFIVNWAKKLGLEVKQDE-------------------------------VGNVLIRK 53 (477)
T ss_pred HHHHHHHHHcCCCC-CccHHHHHHHHHHHHHHcCCeEEEeC-------------------------------CCeEEEEE
Confidence 34555555555432 33345689999999999999875321 13899988
Q ss_pred cCCCC-CCceeEEEEEeeccCCCC------------------------------ccchhhHHHHHHHHHHHhcCCccccc
Q 005387 154 RAPRG-DGKEAIVLVTPYNAVKGG------------------------------VRETLSLGIAYSVFSLLTRVTWLAKD 202 (699)
Q Consensus 154 rAPRg-dgtEaiVL~ap~~~~~~~------------------------------~~~~~sval~LaLa~yl~r~~~wAKD 202 (699)
.+..+ .+...+++..+.|..... .+...|++.+++.++. .....+|
T Consensus 54 ~~~~g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~~~~~~ 130 (477)
T TIGR01893 54 PATPGYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NNLKHPP 130 (477)
T ss_pred cCCCCCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CCCCCCC
Confidence 77444 234679998888753211 1345567777766543 3334679
Q ss_pred eEEEeeCCCCCCchhHHHHHHHh
Q 005387 203 IIWLVADSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 203 IIfl~~D~~~g~~~G~~AWL~aY 225 (699)
|.++++-+++....|.+++.++.
T Consensus 131 i~~~~~~dEE~g~~Gs~~l~~~~ 153 (477)
T TIGR01893 131 LELLFTVDEETGMDGALGLDENW 153 (477)
T ss_pred EEEEEEeccccCchhhhhcChhh
Confidence 99999644444456888887654
No 24
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=93.85 E-value=0.45 Score=53.34 Aligned_cols=97 Identities=12% Similarity=0.060 Sum_probs=72.1
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
..++|+.++|+++|+++..- .. -|+||.+.... .+..+|++-.+.|+.
T Consensus 34 ~a~~~~~~~~~~~Gl~v~~D------------------------------~~-gN~~~~~~g~~-~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 34 AAQQQFKKRMAESGLETRFD------------------------------DV-GNLYGRLVGTE-FPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHHHcCCEEEEc------------------------------CC-CcEEEEecCCC-CCCCeEEEeccccCC
Confidence 35789999999999997631 12 39999998743 355799999999886
Q ss_pred CC--CccchhhHHHHHHHHHHHhcC-CccccceEEEeeCCCCCC-----chhHHHHH
Q 005387 174 KG--GVRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGE-----YAPVAAWL 222 (699)
Q Consensus 174 ~~--~~~~~~sval~LaLa~yl~r~-~~wAKDIIfl~~D~~~g~-----~~G~~AWL 222 (699)
.. ..++..||..+|..++.++.. .---++|-+++.=.++|. ..|.++|.
T Consensus 82 ~~gG~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~ 138 (406)
T TIGR03176 82 VNGGNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIF 138 (406)
T ss_pred CCCCccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHh
Confidence 43 235578999999999999976 556788888874233333 67888876
No 25
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=93.79 E-value=0.57 Score=51.42 Aligned_cols=108 Identities=11% Similarity=0.083 Sum_probs=69.2
Q ss_pred cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCC-CceeEEEEEeec
Q 005387 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGD-GKEAIVLVTPYN 171 (699)
Q Consensus 93 ~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgd-gtEaiVL~ap~~ 171 (699)
.+..+||.++|+++|+++.++..... .. ...+ |+.+..+ ++ +...|++.+++|
T Consensus 21 ~~~a~~l~~~l~~~G~~~~~~~~~~~------------------~~----~~~~-~~~~~~~---g~~~~~~ill~~H~D 74 (375)
T TIGR01910 21 ETIANYIKDLLREFGFSTDVIEITDD------------------RL----KVLG-KVVVKEP---GNGNEKSLIFNGHYD 74 (375)
T ss_pred HHHHHHHHHHHHHCCCceEEEecCch------------------hc----cccc-ceEEecc---CCCCCCEEEEecccc
Confidence 46789999999999999876432100 00 0112 4444443 33 245799988886
Q ss_pred cCCC------------------------CccchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCCCchhHHHHHHHhc
Q 005387 172 AVKG------------------------GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 172 ~~~~------------------------~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g~~~G~~AWL~aYH 226 (699)
.... ..+...+++.++..++.+++.. -+.+||.|+++-+++....|+++++++.+
T Consensus 75 tVp~~~~~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~ 154 (375)
T TIGR01910 75 VVPAGDLELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGY 154 (375)
T ss_pred cccCCChhhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCC
Confidence 5321 1233457888888888887654 36889999996444333569999998643
No 26
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=93.73 E-value=0.93 Score=50.61 Aligned_cols=129 Identities=14% Similarity=0.045 Sum_probs=75.9
Q ss_pred HHHHHHHHHHhhhcCC--CCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEE
Q 005387 73 EANKLIKELNNLHSNP--LGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~--~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvy 150 (699)
++.++.++|-+...-+ +....+..++|.++|+++|+++..+..... +...+ ...+.|++
T Consensus 15 ~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~----------------~~~~~---~~~~~nli 75 (427)
T PRK13013 15 DLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGA----------------PGDSE---TYPRWNLV 75 (427)
T ss_pred HHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCC----------------Ccccc---cCCcceEE
Confidence 4455555665554432 122235789999999999999876532100 00000 12357999
Q ss_pred EEEcCCCCCCceeEEEEEeeccCCC----------------------CccchhhHHHHHHHHHHHhcCCc-cccceEEEe
Q 005387 151 GIIRAPRGDGKEAIVLVTPYNAVKG----------------------GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLV 207 (699)
Q Consensus 151 gIlrAPRgdgtEaiVL~ap~~~~~~----------------------~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~ 207 (699)
|.++.. ++...|++..++|..-. ..+...+++.++..++.+++..+ ..+||+|++
T Consensus 76 a~~~g~--~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~ 153 (427)
T PRK13013 76 ARRQGA--RDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISG 153 (427)
T ss_pred EEecCC--CCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEE
Confidence 998542 22357999888764311 11224578888888898887543 478999999
Q ss_pred e-CCCCCCchhHHHHH
Q 005387 208 A-DSQYGEYAPVAAWL 222 (699)
Q Consensus 208 ~-D~~~g~~~G~~AWL 222 (699)
+ |.+.|...|.+..+
T Consensus 154 ~~dEE~g~~~g~~~l~ 169 (427)
T PRK13013 154 TADEESGGFGGVAYLA 169 (427)
T ss_pred EeccccCChhHHHHHH
Confidence 5 54333333444433
No 27
>PRK07473 carboxypeptidase; Provisional
Probab=93.56 E-value=1.2 Score=49.22 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=76.8
Q ss_pred HHHHHHHHhhhcCCCCCc--cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 75 NKLIKELNNLHSNPLGAT--TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 75 ~~y~~el~~~~~~~~~~~--~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
.++.++|-+....+.+.. ....+|+.++|+++|+++..+... ...+.|+++.
T Consensus 14 ~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~--------------------------~~~~~~~~~~ 67 (376)
T PRK07473 14 LAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGR--------------------------QGFGDCVRAR 67 (376)
T ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCC--------------------------CCCCCeEEEE
Confidence 344445544444332211 134678999999999998754310 1124588888
Q ss_pred EcCCCCCCceeEEEEEeeccCCC--------------------CccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCC
Q 005387 153 IRAPRGDGKEAIVLVTPYNAVKG--------------------GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQ 211 (699)
Q Consensus 153 lrAPRgdgtEaiVL~ap~~~~~~--------------------~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~ 211 (699)
++.+.. +.-.+++..++|.... ..+...+++.++..++.+++... ...||.|+++-++
T Consensus 68 ~~~~~~-~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dE 146 (376)
T PRK07473 68 FPHPRQ-GEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDE 146 (376)
T ss_pred eCCCCC-CCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCc
Confidence 865322 2346999888874310 01234678888888888876542 3458999996433
Q ss_pred CCCchhHHHHHHHhc
Q 005387 212 YGEYAPVAAWLRDYH 226 (699)
Q Consensus 212 ~g~~~G~~AWL~aYH 226 (699)
+....|++++++++.
T Consensus 147 E~g~~g~~~~~~~~~ 161 (376)
T PRK07473 147 EVGTPSTRDLIEAEA 161 (376)
T ss_pred ccCCccHHHHHHHhh
Confidence 334579999999764
No 28
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=93.38 E-value=1.2 Score=48.87 Aligned_cols=130 Identities=15% Similarity=0.124 Sum_probs=79.0
Q ss_pred HHHHHHHHHHhhhcCCC----CCccchHHHHHHHHHHcCCc-eeeeccccCCccCCCcccccCCCCCccccCCccccccc
Q 005387 73 EANKLIKELNNLHSNPL----GATTESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~----~~~~~~~~~l~~~l~~lGle-~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~ 147 (699)
.+.++.++|-+....+. ++.....++|.++|+++|++ +..+..... + +. ...+.
T Consensus 6 ~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~---------------~----~~--~~~~~ 64 (400)
T PRK13983 6 EMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDP---------------R----VI--EGVRP 64 (400)
T ss_pred HHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCc---------------c----cc--cCCCc
Confidence 34556666665554331 12235689999999999998 655432110 0 00 01258
Q ss_pred eEEEEEcCCCCCCceeEEEEEeeccCCCC------------------------ccchhhHHHHHHHHHHHhcCC-ccccc
Q 005387 148 NTVGIIRAPRGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIAYSVFSLLTRVT-WLAKD 202 (699)
Q Consensus 148 NvygIlrAPRgdgtEaiVL~ap~~~~~~~------------------------~~~~~sval~LaLa~yl~r~~-~wAKD 202 (699)
|+++.++.. ++...+++..++|..-.+ .+...+++.++..++.+++.. -+-+|
T Consensus 65 nl~~~~~g~--~~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~ 142 (400)
T PRK13983 65 NIVAKIPGG--DGKRTLWIISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYN 142 (400)
T ss_pred cEEEEecCC--CCCCeEEEEeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCc
Confidence 999998653 222389998888653211 122457777777777776543 46789
Q ss_pred eEEEee-CCCCCCchhHHHHHHHh
Q 005387 203 IIWLVA-DSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 203 IIfl~~-D~~~g~~~G~~AWL~aY 225 (699)
|.|+|. |.+.|...|++..++++
T Consensus 143 v~~~~~~dEE~g~~~g~~~~~~~~ 166 (400)
T PRK13983 143 LGLAFVSDEETGSKYGIQYLLKKH 166 (400)
T ss_pred EEEEEEeccccCCcccHHHHHhhc
Confidence 999996 44334445788888764
No 29
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=93.30 E-value=0.62 Score=52.14 Aligned_cols=99 Identities=7% Similarity=-0.019 Sum_probs=68.6
Q ss_pred chHHHHHHHHHHcCCc-eeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle-~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
++.++|.++|+++|++ ++.. .+--||||.+++..+++...++++++.|+
T Consensus 34 ~~a~~l~~~l~~lG~~~v~~d------------------------------~~~gnv~~~~~~~~~~~~~~i~~~aHmDT 83 (410)
T TIGR01882 34 TFGNMLVDDLKSLGLQDAHYD------------------------------EKNGYVIATIPSNTDKDVPTIGFLAHVDT 83 (410)
T ss_pred HHHHHHHHHHHHcCCceEEEc------------------------------CCceEEEEEecCCCCCCCCEEEEEEeccc
Confidence 6789999999999996 7631 01258999997755444588999998877
Q ss_pred CCC----------------------------------------------C-------ccchhhHHHHHHHHHHHhcC-Cc
Q 005387 173 VKG----------------------------------------------G-------VRETLSLGIAYSVFSLLTRV-TW 198 (699)
Q Consensus 173 ~~~----------------------------------------------~-------~~~~~sval~LaLa~yl~r~-~~ 198 (699)
... . .+...|+|.++..++++++. .-
T Consensus 84 v~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~~ 163 (410)
T TIGR01882 84 ADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPEI 163 (410)
T ss_pred CcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCCC
Confidence 431 0 12235799999999999764 33
Q ss_pred cccceEEEeeCCCCCCchhHHHHHH
Q 005387 199 LAKDIIWLVADSQYGEYAPVAAWLR 223 (699)
Q Consensus 199 wAKDIIfl~~D~~~g~~~G~~AWL~ 223 (699)
...+|.|+|+-+++.. .|.+..+.
T Consensus 164 ~~g~I~~~ft~dEE~g-~Ga~~l~~ 187 (410)
T TIGR01882 164 KHGTIRVAFTPDEEIG-RGAHKFDV 187 (410)
T ss_pred CCCCEEEEEECcccCC-cCcchhhh
Confidence 5679999997443322 36666543
No 30
>PRK13381 peptidase T; Provisional
Probab=92.95 E-value=0.96 Score=50.32 Aligned_cols=100 Identities=12% Similarity=0.051 Sum_probs=65.3
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..+||.++|+++|+|+... . .--||+|.+++. +++...+++..++|..
T Consensus 32 ~~~~~l~~~l~~~G~~~~~~-----------------------------~-~~~nvi~~~~g~-~~~~~~lll~~H~D~V 80 (404)
T PRK13381 32 ELAKLLADELRELGLEDIVI-----------------------------D-EHAIVTAKLPGN-TPGAPRIGFIAHLDTV 80 (404)
T ss_pred HHHHHHHHHHHHcCCCcEEE-----------------------------c-CCeEEEEEEecC-CCCCCeEEEEEEecCC
Confidence 57899999999999964321 0 012999998542 2233689998877654
Q ss_pred CC-------------------------------------------------C----ccchhhHHHHHHHHHHHhcCCccc
Q 005387 174 KG-------------------------------------------------G----VRETLSLGIAYSVFSLLTRVTWLA 200 (699)
Q Consensus 174 ~~-------------------------------------------------~----~~~~~sval~LaLa~yl~r~~~wA 200 (699)
-. . .+...+++.++..++.+++..-..
T Consensus 81 p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~~~~ 160 (404)
T PRK13381 81 DVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENEVEH 160 (404)
T ss_pred CccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcCCCC
Confidence 11 1 223346777777778776554446
Q ss_pred cceEEEeeCCCCCCchhHHHHHHH
Q 005387 201 KDIIWLVADSQYGEYAPVAAWLRD 224 (699)
Q Consensus 201 KDIIfl~~D~~~g~~~G~~AWL~a 224 (699)
.||+|+++-+++....|.++++.+
T Consensus 161 g~i~~~~~~dEE~g~~G~~~~~~~ 184 (404)
T PRK13381 161 GDIVVAFVPDEEIGLRGAKALDLA 184 (404)
T ss_pred CCEEEEEEcccccccccHHHHHHh
Confidence 699999964333334688988764
No 31
>PRK06446 hypothetical protein; Provisional
Probab=92.90 E-value=1.4 Score=49.80 Aligned_cols=120 Identities=14% Similarity=0.145 Sum_probs=76.0
Q ss_pred HHHHHHHHhhhcCCCCCc--cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 75 NKLIKELNNLHSNPLGAT--TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 75 ~~y~~el~~~~~~~~~~~--~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
..+.++|-+....+.+.. .+..+||.++|+++|+++..++. ..+.|+++.
T Consensus 5 ~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~----------------------------~~~~~lia~ 56 (436)
T PRK06446 5 LYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERT----------------------------KGHPVVYGE 56 (436)
T ss_pred HHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEec----------------------------CCCCEEEEE
Confidence 444555555554432211 36789999999999999865431 024689888
Q ss_pred EcCCCCCCceeEEEEEeeccCCC------------------------CccchhhHHHHHHHHHHHhcCCccccceEEEee
Q 005387 153 IRAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVA 208 (699)
Q Consensus 153 lrAPRgdgtEaiVL~ap~~~~~~------------------------~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~ 208 (699)
+.. + +.-.+++..++|.... ..+...+++.++..++.+++..-..++|.|+++
T Consensus 57 ~~~--~-~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~~~~~~i~~~~~ 133 (436)
T PRK06446 57 INV--G-AKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKHKLNVNVKFLYE 133 (436)
T ss_pred ecC--C-CCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcCCCCCCEEEEEE
Confidence 753 2 2346999888765210 112345777777666666544446789999995
Q ss_pred -CCCCCCchhHHHHHHHhc
Q 005387 209 -DSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 209 -D~~~g~~~G~~AWL~aYH 226 (699)
|.+.| ..|++++++++.
T Consensus 134 ~dEE~g-~~g~~~~l~~~~ 151 (436)
T PRK06446 134 GEEEIG-SPNLEDFIEKNK 151 (436)
T ss_pred cccccC-CHhHHHHHHHHH
Confidence 54444 468999998854
No 32
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=92.53 E-value=2 Score=44.98 Aligned_cols=123 Identities=10% Similarity=0.118 Sum_probs=74.6
Q ss_pred EEEEEeeccCC-------CCccchhhHHHHHHHHHHHhcC----CccccceEEEeeCCCCCCchhHHHHHHHhcCCCCCC
Q 005387 164 IVLVTPYNAVK-------GGVRETLSLGIAYSVFSLLTRV----TWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSN 232 (699)
Q Consensus 164 iVL~ap~~~~~-------~~~~~~~sval~LaLa~yl~r~----~~wAKDIIfl~~D~~~g~~~G~~AWL~aYH~~~~~~ 232 (699)
|++++..|+.. +......|+..+|+.|+.|++. +=+.|+|+|.+.+++.=+|.|-+.|+.+-....+..
T Consensus 3 Ilv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vyDm~~~~f~~ 82 (234)
T PF05450_consen 3 ILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVYDMQNGNFPS 82 (234)
T ss_pred EEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHHHHHcCcCcc
Confidence 56667776531 2233457888889999999865 356999999999886556899999999998754320
Q ss_pred CcccccccccCCCCCcccccccccccccceeeeeEEeecCCCCCc-ceEEEEeecCCCCCCchhHHHHHHHHHh
Q 005387 233 LDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENE-DTLGIYAEASNGQMPNLDLINIVHYLAV 305 (699)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~raG~IqaAl~le~~~~~~~~-~~l~I~~eG~NGqLPNLDLiN~v~~ia~ 305 (699)
... + ....+-..|...| |++.-+... ..+.+.+.+.+++--+..+.+.+.++..
T Consensus 83 ~~~-----~------------~~~i~~~~I~~~I--Elgqvg~~~~~~l~~Hvd~~~~~~~~~~~~~~l~~~~~ 137 (234)
T PF05450_consen 83 DSL-----Q------------FQPISLDNIDSVI--ELGQVGLSNSSGLYAHVDSPSNSSVANQVDEALDAAAK 137 (234)
T ss_pred ccc-----c------------cccccHHHCCEEE--EeeccCCCCCCCEEEEecCCccchhhHHHHHHHHHHHH
Confidence 000 0 0002334466654 666655422 2355555565555554445555555543
No 33
>PRK08262 hypothetical protein; Provisional
Probab=92.47 E-value=1.5 Score=50.06 Aligned_cols=137 Identities=15% Similarity=0.114 Sum_probs=81.5
Q ss_pred ccccccCCCcceeeeccchhHHHHHHHHHHHHhhhcCCCCCcc--------chHHHHHHHHHHcCCceeeeccccCCccC
Q 005387 51 YISENALMPGSASSMLSNQEVSEANKLIKELNNLHSNPLGATT--------ESHGIIAKYMSNLGAQVNNHKFHPQLNQF 122 (699)
Q Consensus 51 YiSENALlPG~v~~~f~~~~~~~a~~y~~el~~~~~~~~~~~~--------~~~~~l~~~l~~lGle~~~q~f~~~~~~f 122 (699)
-||--|.-|=- . +..+..++.+++-+....+.+... ...+||.++|+++|.++..+.
T Consensus 30 ~~~~~~~~~~~----~---~~~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~-------- 94 (486)
T PRK08262 30 QIDVPAVAPVA----V---DEDAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREV-------- 94 (486)
T ss_pred CCCccccCCCc----C---CHHHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEE--------
Confidence 46666666622 1 222345666666555554432111 267888888888898765432
Q ss_pred CCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccCC--------------------------CC
Q 005387 123 HPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVK--------------------------GG 176 (699)
Q Consensus 123 ~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~--------------------------~~ 176 (699)
..|.|+++.++.+ +.+...+++.+++|... +.
T Consensus 95 ---------------------~~~~~vv~~~~g~-~~~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~ 152 (486)
T PRK08262 95 ---------------------VGGHSLLYTWKGS-DPSLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGA 152 (486)
T ss_pred ---------------------ECCccEEEEEECC-CCCCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEecCc
Confidence 1245777776542 12336788877775421 11
Q ss_pred ccchhhHHHHHHHHHHHhcCC-ccccceEEEee-CCCCCCchhHHHHHHHh
Q 005387 177 VRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA-DSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 177 ~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~-D~~~g~~~G~~AWL~aY 225 (699)
.+...+++.++..++++++.. -+.++|.|+|+ |.+.|. .|++++++.+
T Consensus 153 ~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~-~G~~~l~~~l 202 (486)
T PRK08262 153 LDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGG-LGARAIAELL 202 (486)
T ss_pred cccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCC-cCHHHHHHHH
Confidence 123467888888888887654 46789999996 543333 4888777653
No 34
>PRK13004 peptidase; Reviewed
Probab=92.22 E-value=2.2 Score=47.33 Aligned_cols=116 Identities=11% Similarity=0.055 Sum_probs=72.0
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.+++-+....+.+ ..+..++|.++|+++|+++... . ...|++|.+
T Consensus 17 ~~~~l~~lv~ips~s~~-e~~~a~~l~~~l~~~G~~~~~~-----------------------------~-~~~n~~a~~ 65 (399)
T PRK13004 17 MTRFLRDLIRIPSESGD-EKRVVKRIKEEMEKVGFDKVEI-----------------------------D-PMGNVLGYI 65 (399)
T ss_pred HHHHHHHHhcCCCCCCc-hHHHHHHHHHHHHHcCCcEEEE-----------------------------c-CCCeEEEEE
Confidence 44445555554443333 3467899999999999874311 0 123788877
Q ss_pred cCCCCCCceeEEEEEeeccCCCC------------------------ccchhhHHHHHHHHHHHhcCCc-cccceEEEee
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVA 208 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~~------------------------~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~ 208 (699)
.. +...+++.+.+|..... .+...+++.++..++.+++... +.++|+++++
T Consensus 66 ~~----~~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~ 141 (399)
T PRK13004 66 GH----GKKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGT 141 (399)
T ss_pred CC----CCcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Confidence 43 12578888888653210 1223688888888899987553 5789999985
Q ss_pred -CCCCCCchhHHHHHHH
Q 005387 209 -DSQYGEYAPVAAWLRD 224 (699)
Q Consensus 209 -D~~~g~~~G~~AWL~a 224 (699)
|.+.+.-.|.+.++++
T Consensus 142 ~~EE~~~g~~~~~~~~~ 158 (399)
T PRK13004 142 VQEEDCDGLCWRYIIEE 158 (399)
T ss_pred cccccCcchhHHHHHHh
Confidence 4322223456677764
No 35
>PLN02693 IAA-amino acid hydrolase
Probab=92.19 E-value=1.9 Score=49.04 Aligned_cols=119 Identities=8% Similarity=0.086 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEE
Q 005387 72 SEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (699)
Q Consensus 72 ~~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvyg 151 (699)
....+++++|.+...-+... .+..++|.++|+++|+++.. . ..++|++|
T Consensus 47 ~~~~~~r~~lh~~PE~s~~E-~~ta~~i~~~L~~~G~~~~~-~-----------------------------~~~~~via 95 (437)
T PLN02693 47 DWMVRIRRKIHENPELGYEE-FETSKLIRSELDLIGIKYRY-P-----------------------------VAITGIIG 95 (437)
T ss_pred HHHHHHHHHHHhCCCCCCch-HHHHHHHHHHHHHCCCeeEe-c-----------------------------CCCcEEEE
Confidence 34567777777776655443 36799999999999998641 0 12579999
Q ss_pred EEcCCCCCCceeEEEEEeeccCCCC-----------------ccchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCC
Q 005387 152 IIRAPRGDGKEAIVLVTPYNAVKGG-----------------VRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYG 213 (699)
Q Consensus 152 IlrAPRgdgtEaiVL~ap~~~~~~~-----------------~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g 213 (699)
.+... +| -.|++.+..|..-.+ -+-..+++.+++.++++++.. -+..+|.|+|+-++++
T Consensus 96 ~~g~~--~g-~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~ 172 (437)
T PLN02693 96 YIGTG--EP-PFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEG 172 (437)
T ss_pred EECCC--CC-CEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccc
Confidence 98432 22 479999888653110 011236788888899998653 4678999999654443
Q ss_pred CchhHHHHHHHh
Q 005387 214 EYAPVAAWLRDY 225 (699)
Q Consensus 214 ~~~G~~AWL~aY 225 (699)
..|.+..+++.
T Consensus 173 -~~Ga~~~i~~g 183 (437)
T PLN02693 173 -LSGAKKMREEG 183 (437)
T ss_pred -hhhHHHHHHCC
Confidence 25889998864
No 36
>PRK07907 hypothetical protein; Provisional
Probab=92.01 E-value=2.3 Score=48.14 Aligned_cols=120 Identities=13% Similarity=0.140 Sum_probs=74.6
Q ss_pred HHHHHHHHHhhhcCCCC-----CccchHHHHHHHHHHcCC-ceeeeccccCCccCCCcccccCCCCCccccCCccccccc
Q 005387 74 ANKLIKELNNLHSNPLG-----ATTESHGIIAKYMSNLGA-QVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~-----~~~~~~~~l~~~l~~lGl-e~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~ 147 (699)
+.++.++|-+...-+.+ ......++|.++|+++|+ ++..++ . . ...
T Consensus 20 ~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~-------------------------~-~~~ 71 (449)
T PRK07907 20 VRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVS--A-------------------------D-GAP 71 (449)
T ss_pred HHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEe--c-------------------------C-CCC
Confidence 44455555544443321 123568999999999997 665442 0 0 135
Q ss_pred eEEEEEcCCCCCCceeEEEEEeeccCC------------------------CCccchhhHHHHHHHHHHHhcCCccccce
Q 005387 148 NTVGIIRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDI 203 (699)
Q Consensus 148 NvygIlrAPRgdgtEaiVL~ap~~~~~------------------------~~~~~~~sval~LaLa~yl~r~~~wAKDI 203 (699)
|+++.++. +++...+++..++|... +..+...+++.++..++.+ +.. ...+|
T Consensus 72 nl~a~~~~--~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l-~~~-~~~~i 147 (449)
T PRK07907 72 AVIGTRPA--PPGAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL-GGD-LPVGV 147 (449)
T ss_pred EEEEEecC--CCCCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh-ccC-CCCcE
Confidence 89888854 23456788977775421 1123346788777777777 333 35789
Q ss_pred EEEeeCCCCCCchhHHHHHHHh
Q 005387 204 IWLVADSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 204 Ifl~~D~~~g~~~G~~AWL~aY 225 (699)
.|+++.+++....|++++++++
T Consensus 148 ~~~~~~dEE~g~~g~~~~l~~~ 169 (449)
T PRK07907 148 TVFVEGEEEMGSPSLERLLAEH 169 (449)
T ss_pred EEEEEcCcccCCccHHHHHHhc
Confidence 9998644433346999999986
No 37
>PRK06837 acetylornithine deacetylase; Provisional
Probab=91.84 E-value=2.5 Score=47.55 Aligned_cols=122 Identities=16% Similarity=0.190 Sum_probs=69.6
Q ss_pred HHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcC
Q 005387 76 KLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRA 155 (699)
Q Consensus 76 ~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrA 155 (699)
++.+++-+...-+.+ ..+..+||.++|+++|+++......... ..+.+..++.+ .....+.|+++.++.
T Consensus 24 ~~l~~li~ipS~s~~-e~~~~~~l~~~l~~~G~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~nl~a~~~g 92 (427)
T PRK06837 24 AFTQDLVRFPSTRGA-EAPCQDFLARAFRERGYEVDRWSIDPDD-------LKSHPGAGPVE---IDYSGAPNVVGTYRP 92 (427)
T ss_pred HHHHHHhccCCCCCc-HHHHHHHHHHHHHHCCCceEEecCCHHH-------hhhcccccccc---cccCCCceEEEEecC
Confidence 344444444443332 3467899999999999998765422100 00000000000 001246899999974
Q ss_pred CCCCCceeEEEEEeeccCCC------------------------CccchhhHHHHHHHHHHHhcCCc-cccceEEEeeC
Q 005387 156 PRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVAD 209 (699)
Q Consensus 156 PRgdgtEaiVL~ap~~~~~~------------------------~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D 209 (699)
-+.++ -.+++..++|.... ..+...+++.++..++.+++... +.+||+|+++-
T Consensus 93 ~~~~~-~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~~~~~~ 170 (427)
T PRK06837 93 AGKTG-RSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARVHFQSVI 170 (427)
T ss_pred CCCCC-CeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEEe
Confidence 22222 47999988875421 11334577777777788876543 57899999863
No 38
>PRK07338 hypothetical protein; Provisional
Probab=91.83 E-value=2.7 Score=46.54 Aligned_cols=117 Identities=9% Similarity=0.043 Sum_probs=70.2
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..+||.++|+++|+++..+..... +.. +.+.... ....|.|+++.++. ++...++|..++|..
T Consensus 41 ~~~~~l~~~l~~~G~~~~~~~~~~~-------~~~----~~~~~~~--~~~~~~nl~a~~~~---~~~~~lll~gH~DvV 104 (402)
T PRK07338 41 RMAELLADAFAALPGEIELIPLPPV-------EVI----DADGRTL--EQAHGPALHVSVRP---EAPRQVLLTGHMDTV 104 (402)
T ss_pred HHHHHHHHHHHhCCCcEEEecCCcc-------ccc----ccccccc--ccCcCCeEEEEECC---CCCccEEEEeecCcc
Confidence 4678999999999999865432110 000 0000000 01246799999842 222359999988653
Q ss_pred CC-----------C---------ccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCCCchhHHHHHHHhc
Q 005387 174 KG-----------G---------VRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 174 ~~-----------~---------~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g~~~G~~AWL~aYH 226 (699)
-. + .+...+++.+++.++.+++... ..++|.|+++-+++....|.+.++++..
T Consensus 105 p~~~~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~ 178 (402)
T PRK07338 105 FPADHPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINPDEEIGSPASAPLLAELA 178 (402)
T ss_pred CCCCCcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECCcccCChhhHHHHHHHh
Confidence 11 0 1223578888888888876442 4579999996333323468888888764
No 39
>PRK06915 acetylornithine deacetylase; Validated
Probab=91.74 E-value=2.5 Score=47.24 Aligned_cols=136 Identities=19% Similarity=0.187 Sum_probs=75.7
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
+.++.++|-+...-+.+ ..+..++|+++|+++|+++..+.........+| .|.. .......+.|++|.+
T Consensus 19 ~~~~l~~lv~ips~s~~-e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~nlia~~ 87 (422)
T PRK06915 19 AVKLLKRLIQEKSVSGD-ESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHP--YFVS--------PRTSFSDSPNIVATL 87 (422)
T ss_pred HHHHHHHHHhCCCCCcc-hHHHHHHHHHHHHhcCCeeEEeecchhhhhccc--ccCC--------cccccCCCceEEEEE
Confidence 44555566555544333 336788999999999999876543221000000 0000 000011468999999
Q ss_pred cCCCCCCceeEEEEEeeccCCC------------------------CccchhhHHHHHHHHHHHhcCCc-cccceEEEee
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVA 208 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~------------------------~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~ 208 (699)
+.. +.+ ..+++.+.+|..-. ..+...+++.++..++.+++..+ +..+|+|+++
T Consensus 88 ~g~-~~~-~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~~~~ 165 (422)
T PRK06915 88 KGS-GGG-KSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIFQSV 165 (422)
T ss_pred cCC-CCC-CeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 632 233 47888887754311 01223366666777788876653 4679999995
Q ss_pred -CCCCCCchhHHHHHH
Q 005387 209 -DSQYGEYAPVAAWLR 223 (699)
Q Consensus 209 -D~~~g~~~G~~AWL~ 223 (699)
|.+.| ..|..+.++
T Consensus 166 ~dEE~g-~~G~~~~~~ 180 (422)
T PRK06915 166 IEEESG-GAGTLAAIL 180 (422)
T ss_pred cccccC-CcchHHHHh
Confidence 54322 236555544
No 40
>PRK09104 hypothetical protein; Validated
Probab=91.49 E-value=2.4 Score=48.10 Aligned_cols=103 Identities=12% Similarity=0.122 Sum_probs=69.5
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..++|+++|+++|+++..+.. ..+.|+++.++..+ .+...++|..++|..
T Consensus 44 ~~~~~l~~~l~~~G~~v~~~~~----------------------------~~~~~l~a~~~g~~-~~~~~lll~gH~DvV 94 (464)
T PRK09104 44 KAADWLVADLASLGFEASVRDT----------------------------PGHPMVVAHHEGPT-GDAPHVLFYGHYDVQ 94 (464)
T ss_pred HHHHHHHHHHHHCCCeEEEEec----------------------------CCCCEEEEEecCCC-CCCCEEEEEecccCC
Confidence 4589999999999998865431 02358998886432 235678888877641
Q ss_pred C-----------------------------CCccchhhHHHHHHHHHHHhcC-CccccceEEEee-CCCCCCchhHHHHH
Q 005387 174 K-----------------------------GGVRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVA-DSQYGEYAPVAAWL 222 (699)
Q Consensus 174 ~-----------------------------~~~~~~~sval~LaLa~yl~r~-~~wAKDIIfl~~-D~~~g~~~G~~AWL 222 (699)
. +..+...+++..+..++-+++. ..+.++|+|+++ |.+.| ..|+++++
T Consensus 95 p~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g-~~g~~~~l 173 (464)
T PRK09104 95 PVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEEESG-SPSLVPFL 173 (464)
T ss_pred CCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECccccC-CccHHHHH
Confidence 1 0012235788888878877763 456789999995 54433 46899999
Q ss_pred HHhc
Q 005387 223 RDYH 226 (699)
Q Consensus 223 ~aYH 226 (699)
++..
T Consensus 174 ~~~~ 177 (464)
T PRK09104 174 EANA 177 (464)
T ss_pred HhhH
Confidence 8764
No 41
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=91.48 E-value=1.2 Score=52.47 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=69.1
Q ss_pred chHHHHHHHHHHcCC-ceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 94 ESHGIIAKYMSNLGA-QVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 94 ~~~~~l~~~l~~lGl-e~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
..++|+.++|+++|+ ++... .--|++|.++.++ .+..++++..+.|+
T Consensus 215 ~~~~~l~~~~~~~Gl~~v~~D-------------------------------~~GNl~~~~~g~~-~~~~~v~~gsHlDT 262 (591)
T PRK13590 215 ACAQQISHWMRDCGFDEVHID-------------------------------AVGNVVGRYKGST-PQAKRLLTGSHYDT 262 (591)
T ss_pred HHHHHHHHHHHHcCCCeeeEC-------------------------------CCCCEEEEecCCC-CCCCeEEEeccccc
Confidence 468999999999999 76521 1158999987644 34567999999988
Q ss_pred CC--CCccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCC-----CchhHHHH
Q 005387 173 VK--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAW 221 (699)
Q Consensus 173 ~~--~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g-----~~~G~~AW 221 (699)
.- +..+...||+.+|..++.+++... ..++|.+++.=+++| ...|.++|
T Consensus 263 V~~gG~~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~ 319 (591)
T PRK13590 263 VRNGGKYDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGAL 319 (591)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHH
Confidence 53 334556899999999999987654 356999998533333 25566764
No 42
>PRK05469 peptidase T; Provisional
Probab=90.93 E-value=2.3 Score=47.46 Aligned_cols=98 Identities=9% Similarity=0.045 Sum_probs=65.7
Q ss_pred chHHHHHHHHHHcCCc-eeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle-~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
...+||.++|+++|++ +... ..-||+|.+++....+...|+|..++|.
T Consensus 33 ~~a~~l~~~l~~~G~~~~~~~-------------------------------~~~~v~~~~~g~~~~~~~~i~l~~H~D~ 81 (408)
T PRK05469 33 DLAKLLVEELKELGLQDVTLD-------------------------------ENGYVMATLPANVDKDVPTIGFIAHMDT 81 (408)
T ss_pred HHHHHHHHHHHHcCCCeEEEC-------------------------------CCeEEEEEecCCCCCCCCeEEEEEeccC
Confidence 5689999999999997 3311 1237999986532234578999988876
Q ss_pred CC--C-----------------------------------------------C----ccchhhHHHHHHHHHHHhcCC-c
Q 005387 173 VK--G-----------------------------------------------G----VRETLSLGIAYSVFSLLTRVT-W 198 (699)
Q Consensus 173 ~~--~-----------------------------------------------~----~~~~~sval~LaLa~yl~r~~-~ 198 (699)
.- . . .+...+++.++..++++++.. -
T Consensus 82 vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~~ 161 (408)
T PRK05469 82 APDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPEI 161 (408)
T ss_pred CCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCCC
Confidence 51 0 0 233457888888888887653 3
Q ss_pred cccceEEEeeCCCCCCchhHHHHHH
Q 005387 199 LAKDIIWLVADSQYGEYAPVAAWLR 223 (699)
Q Consensus 199 wAKDIIfl~~D~~~g~~~G~~AWL~ 223 (699)
...+|+|+|+-+++.. .|+++.+.
T Consensus 162 ~~g~v~~~f~~dEE~g-~Ga~~~~~ 185 (408)
T PRK05469 162 KHGDIRVAFTPDEEIG-RGADKFDV 185 (408)
T ss_pred CCCCEEEEEecccccC-CCHHHhhh
Confidence 4569999996433323 68888863
No 43
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=90.91 E-value=2 Score=47.36 Aligned_cols=129 Identities=10% Similarity=0.065 Sum_probs=77.9
Q ss_pred HHHHHHHHHHhhhcCCC--CCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEE
Q 005387 73 EANKLIKELNNLHSNPL--GATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~--~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvy 150 (699)
++.++.+++-+....+. +...+..+||+++|+++|+++..+..... . .+..+ ....|++
T Consensus 7 ~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~---------------~---~~~~~-~~~~~~~ 67 (394)
T PRK08651 7 DIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNE---------------Y---VKKHD-GPRPNLI 67 (394)
T ss_pred HHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCcc---------------c---ccccc-CCcceEE
Confidence 44555666666555431 22235789999999999998776542110 0 00000 1135666
Q ss_pred EEEcCCCCCCceeEEEEEeeccCCC-----------------------CccchhhHHHHHHHHHHHhcCCccccceEEEe
Q 005387 151 GIIRAPRGDGKEAIVLVTPYNAVKG-----------------------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLV 207 (699)
Q Consensus 151 gIlrAPRgdgtEaiVL~ap~~~~~~-----------------------~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~ 207 (699)
+.. +.+.-.|++.++.|.... ..+...+++.+++.++.+++.. .+||.|++
T Consensus 68 ~~~----~~~~~~ill~~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~--~~~v~~~~ 141 (394)
T PRK08651 68 ARR----GSGNPHLHFNGHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG--DGNIELAI 141 (394)
T ss_pred EEe----CCCCceEEEEeeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC--CCCEEEEE
Confidence 642 223357888887764211 0122457888898899998766 78999999
Q ss_pred eCCCCCCchhHHHHHHHhc
Q 005387 208 ADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 208 ~D~~~g~~~G~~AWL~aYH 226 (699)
+-+++....|+++.+++..
T Consensus 142 ~~~EE~g~~G~~~~~~~~~ 160 (394)
T PRK08651 142 VPDEETGGTGTGYLVEEGK 160 (394)
T ss_pred ecCccccchhHHHHHhccC
Confidence 6443322379999998653
No 44
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=90.49 E-value=1.7 Score=51.30 Aligned_cols=97 Identities=18% Similarity=0.207 Sum_probs=70.3
Q ss_pred chHHHHHHHHHHcCCc-eeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle-~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
..++|+.++|+++|++ +.+.. --||||.+..+. .+..++++-.+.|+
T Consensus 215 ~~~~~~~~~~~~~Gl~~v~~D~-------------------------------~gNv~~~~~g~~-~~~p~v~~gSHlDT 262 (591)
T PRK13799 215 ACANQISDWMRDAGFDEVEIDA-------------------------------VGNVVGRYKAAD-DDAKTLITGSHYDT 262 (591)
T ss_pred HHHHHHHHHHHHcCCCeEeECC-------------------------------CCCEEEEcCCCC-CCCCeEEEeccccc
Confidence 4689999999999998 86421 158999976542 23467888889987
Q ss_pred CC--CCccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCC-----CchhHHHHH
Q 005387 173 VK--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAWL 222 (699)
Q Consensus 173 ~~--~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g-----~~~G~~AWL 222 (699)
.- +..+...||..+|..++.++.... ..+||.++..=+++| ...|.++|.
T Consensus 263 V~~gG~~DG~~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~ 320 (591)
T PRK13799 263 VRNGGKYDGREGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALI 320 (591)
T ss_pred cCCCCccccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHh
Confidence 53 334556899999999999986544 578999997422233 467788886
No 45
>PRK07205 hypothetical protein; Provisional
Probab=90.36 E-value=3.4 Score=46.66 Aligned_cols=96 Identities=14% Similarity=0.097 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccCC
Q 005387 95 SHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVK 174 (699)
Q Consensus 95 ~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~ 174 (699)
..+|+.++|+++|+++..+. .|.|+++.. +++...++|..++|..-
T Consensus 43 ~~~~~~~~l~~~g~~~~~~~------------------------------~~~~~~~~~----g~~~~~lll~gH~DvVp 88 (444)
T PRK07205 43 VLEATLDLCQGLGFKTYLDP------------------------------KGYYGYAEI----GQGEELLAILCHLDVVP 88 (444)
T ss_pred HHHHHHHHHHhCCCEEEEcC------------------------------CCeEEEEEe----cCCCcEEEEEEeeccCC
Confidence 56788899999999876431 122343322 34456799988776531
Q ss_pred C------------------------CccchhhHHHHHHHHHHHhcCC-ccccceEEEee-CCCCCCchhHHHHHHHh
Q 005387 175 G------------------------GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA-DSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 175 ~------------------------~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~-D~~~g~~~G~~AWL~aY 225 (699)
. ..+...+++.++..++.+++.. -+.+||.|+++ |-+.+ ..|++++++.+
T Consensus 89 ~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g-~~g~~~~~~~~ 164 (444)
T PRK07205 89 EGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETL-WRCMNRYNEVE 164 (444)
T ss_pred CCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccC-cccHHHHHhCC
Confidence 1 1223456777776667776543 45789999996 54333 46889998764
No 46
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=90.24 E-value=2.3 Score=46.23 Aligned_cols=111 Identities=15% Similarity=0.132 Sum_probs=69.7
Q ss_pred HHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
++.++.++|-+....+ +......+||.++|+++|+++.... ..|++.
T Consensus 11 ~~~~~l~~lv~i~s~s-~~e~~~~~~l~~~l~~~g~~~~~~~-------------------------------~~~~~~- 57 (346)
T PRK00466 11 KAKELLLDLLSIYTPS-GNETNATKFFEKISNELNLKLEILP-------------------------------DSNSFI- 57 (346)
T ss_pred HHHHHHHHHhcCCCCC-CCHHHHHHHHHHHHHHcCCeEEEec-------------------------------CCCcEe-
Confidence 4455666666655533 3334679999999999999876432 113331
Q ss_pred EcCCCCCCceeEEEEEeeccC---------------CCCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchh
Q 005387 153 IRAPRGDGKEAIVLVTPYNAV---------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAP 217 (699)
Q Consensus 153 lrAPRgdgtEaiVL~ap~~~~---------------~~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G 217 (699)
. | ...+++..++|.. .+..+...+++.+++.++.+++.. ..++|+++-+++....|
T Consensus 58 -~---g--~~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~---~~i~~~~~~dEE~g~~G 128 (346)
T PRK00466 58 -L---G--EGDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG---IKVMVSGLADEESTSIG 128 (346)
T ss_pred -c---C--CCeEEEEeccccCCCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcC---CCEEEEEEcCcccCCcc
Confidence 1 1 2347777777664 222344567888888888887765 25888886333333469
Q ss_pred HHHHHHHh
Q 005387 218 VAAWLRDY 225 (699)
Q Consensus 218 ~~AWL~aY 225 (699)
++++++..
T Consensus 129 ~~~l~~~~ 136 (346)
T PRK00466 129 AKELVSKG 136 (346)
T ss_pred HHHHHhcC
Confidence 99998864
No 47
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=90.19 E-value=3.5 Score=44.88 Aligned_cols=115 Identities=18% Similarity=0.207 Sum_probs=72.8
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
+.++.++|-+....+.+ ..+..+|+.++|+++|+++..++ ..|++|.+
T Consensus 8 ~~~~l~~Lv~i~s~s~~-e~~~~~~l~~~l~~~G~~~~~~~-------------------------------~~n~i~~~ 55 (348)
T PRK04443 8 ARELLKGLVEIPSPSGE-EAAAAEFLVEFMESHGREAWVDE-------------------------------AGNARGPA 55 (348)
T ss_pred HHHHHHHHHcCCCCCCC-hHHHHHHHHHHHHHcCCEEEEcC-------------------------------CCcEEEEc
Confidence 44555666555554433 34678999999999999875321 13777664
Q ss_pred cCCCCCCceeEEEEEeeccCCC---------------CccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhH
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKG---------------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPV 218 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~---------------~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~ 218 (699)
+++...+++..++|..-. ..+...+++.++..++.+ +.. +..||.|+++-+++....|.
T Consensus 56 ----~~~~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l-~~~-~~~~i~~~~~~dEE~g~~~~ 129 (348)
T PRK04443 56 ----GDGPPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLAAFAAAAARL-EAL-VRARVSFVGAVEEEAPSSGG 129 (348)
T ss_pred ----CCCCCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHHHHHHHHHHh-ccc-CCCCEEEEEEcccccCChhH
Confidence 233468999998876521 123345788887777877 433 57799999963333334566
Q ss_pred HHHHHHhc
Q 005387 219 AAWLRDYH 226 (699)
Q Consensus 219 ~AWL~aYH 226 (699)
..++.+-+
T Consensus 130 ~~~l~~~~ 137 (348)
T PRK04443 130 ARLVADRE 137 (348)
T ss_pred HHHHHhcc
Confidence 67776543
No 48
>PRK08201 hypothetical protein; Provisional
Probab=89.63 E-value=4.1 Score=46.14 Aligned_cols=103 Identities=8% Similarity=0.044 Sum_probs=65.5
Q ss_pred chHHHHHHHHHHcCCc-eeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle-~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
+..+||+++|+++|++ +..+.. ....|+++.+... .+...+++..++|.
T Consensus 41 ~~a~~l~~~l~~~G~~~~~~~~~----------------------------~~~~~l~a~~~~~--~~~~~lll~gH~Dv 90 (456)
T PRK08201 41 KAAEWLAGALEKAGLEHVEIMET----------------------------AGHPIVYADWLHA--PGKPTVLIYGHYDV 90 (456)
T ss_pred HHHHHHHHHHHHcCCCeEEEEec----------------------------CCCCEEEEEecCC--CCCCEEEEEeccCC
Confidence 4689999999999997 443320 0124888877531 22345888887765
Q ss_pred CCC------------------------CccchhhHHHHHHHHHHHhc-CCccccceEEEeeCCCCCCchhHHHHHHHhc
Q 005387 173 VKG------------------------GVRETLSLGIAYSVFSLLTR-VTWLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 173 ~~~------------------------~~~~~~sval~LaLa~yl~r-~~~wAKDIIfl~~D~~~g~~~G~~AWL~aYH 226 (699)
... ..+...+++..++.++.+++ ..-...||+|+++-+++....|+..|++++.
T Consensus 91 Vp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 169 (456)
T PRK08201 91 QPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNLDSFVEEEK 169 (456)
T ss_pred cCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccHHHHHHhhH
Confidence 210 12234678877777777754 3345679999996333333468999998763
No 49
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=89.41 E-value=4.9 Score=44.52 Aligned_cols=123 Identities=11% Similarity=0.022 Sum_probs=72.7
Q ss_pred HHHHHHHHHhhhcCCCC-CccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 74 ANKLIKELNNLHSNPLG-ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~-~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
+.++.++|-+....+.. ...+..+||.++|+++|+++..+... ..+.|+++.
T Consensus 11 ~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~---------------------------~g~~~l~~~ 63 (400)
T TIGR01880 11 AVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFV---------------------------PGKPVVVLT 63 (400)
T ss_pred HHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEec---------------------------CCceeEEEE
Confidence 34455555555544322 12357899999999999987643210 024688888
Q ss_pred EcCCCCCCceeEEEEEeeccCC------------------------CCccchhhHHHHHHHHHHHhcCC-ccccceEEEe
Q 005387 153 IRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLV 207 (699)
Q Consensus 153 lrAPRgdgtEaiVL~ap~~~~~------------------------~~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~ 207 (699)
+++.... .--|++.+++|..- +..+...+++.++..++.+++.. =+.++|.|++
T Consensus 64 ~~g~~~~-~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~ 142 (400)
T TIGR01880 64 WPGSNPE-LPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISF 142 (400)
T ss_pred EecCCCC-CCeEEEEcccccCCCCcccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEE
Confidence 7542111 12588877665421 01122356777777777777643 3578999999
Q ss_pred eCCCC-CCchhHHHHHHH
Q 005387 208 ADSQY-GEYAPVAAWLRD 224 (699)
Q Consensus 208 ~D~~~-g~~~G~~AWL~a 224 (699)
+-+++ |...|++..+++
T Consensus 143 ~~dEE~g~~~G~~~~~~~ 160 (400)
T TIGR01880 143 VPDEEIGGHDGMEKFAKT 160 (400)
T ss_pred eCCcccCcHhHHHHHHHh
Confidence 64433 334688877764
No 50
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=89.39 E-value=5 Score=44.61 Aligned_cols=108 Identities=21% Similarity=0.246 Sum_probs=75.5
Q ss_pred ccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeec
Q 005387 92 TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYN 171 (699)
Q Consensus 92 ~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~ 171 (699)
..+..+++.++|+++|+++....+... . ...|+||....+.++ +.++|..++|
T Consensus 33 ~~~~~~~l~~~l~~~g~~~~~~~~~~~------------------------~-~~~n~~~~~~~~~~~--~~l~l~~H~D 85 (409)
T COG0624 33 EAEAAELLAEWLEELGFEVEEDEVGPG------------------------P-GRPNLVARLGGGDGG--PTLLLGGHLD 85 (409)
T ss_pred chHHHHHHHHHHHHcCCceEEeecCCC------------------------C-CceEEEEEecCCCCC--CeEEEecccc
Confidence 346799999999999998875543210 0 245999998886555 9999999886
Q ss_pred cCCC------------------------CccchhhHHHHHHHHHHHhc-CCccccceEEEee-CCCCCCchhHHHHHHHh
Q 005387 172 AVKG------------------------GVRETLSLGIAYSVFSLLTR-VTWLAKDIIWLVA-DSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 172 ~~~~------------------------~~~~~~sval~LaLa~yl~r-~~~wAKDIIfl~~-D~~~g~~~G~~AWL~aY 225 (699)
..-. ..++..+++..+..++-+.. ...+.+++.++++ |...+ ..|+.+|++..
T Consensus 86 vVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g-~~~~~~~~~~~ 164 (409)
T COG0624 86 VVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESG-GAGGKAYLEEG 164 (409)
T ss_pred ccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccC-CcchHHHHHhc
Confidence 5311 11234566666666666655 5677899999996 54444 38899999998
Q ss_pred cC
Q 005387 226 HT 227 (699)
Q Consensus 226 H~ 227 (699)
..
T Consensus 165 ~~ 166 (409)
T COG0624 165 EE 166 (409)
T ss_pred ch
Confidence 75
No 51
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=89.20 E-value=2.8 Score=45.36 Aligned_cols=108 Identities=17% Similarity=0.070 Sum_probs=68.6
Q ss_pred HHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCC
Q 005387 79 KELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRG 158 (699)
Q Consensus 79 ~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRg 158 (699)
++|-+....+.+ ..+..+||.++|+++|+++... .. .|+++.. +
T Consensus 4 ~~lv~i~s~s~~-e~~~~~~l~~~l~~~g~~~~~~------------------------------~~-~~~~~~~----~ 47 (336)
T TIGR01902 4 KDLLEIYSPSGK-EANAAKFLEEISKDLGLKLIID------------------------------DA-GNFILGK----G 47 (336)
T ss_pred HHHhcCCCCCcc-hHHHHHHHHHHHHHcCCEEEEC------------------------------CC-CcEEEEe----C
Confidence 344444443322 3467899999999999987310 01 2666543 2
Q ss_pred CCceeEEEEEeeccCC---------------CCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHH
Q 005387 159 DGKEAIVLVTPYNAVK---------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLR 223 (699)
Q Consensus 159 dgtEaiVL~ap~~~~~---------------~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~ 223 (699)
.+.-.|++..++|... +..+...+++..+..++.+++.. .||+|+++-+++....|++..++
T Consensus 48 ~~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~~---~~i~~~~~~dEE~g~~G~~~~~~ 124 (336)
T TIGR01902 48 DGHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLIAMIFATWLLNEKG---IKVIVSGLVDEESSSKGAREVID 124 (336)
T ss_pred CCCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHHHHHHHHHHHHhCC---CcEEEEEEeCcccCCccHHHHHh
Confidence 2335788888887641 12233567888887778887765 49999986333334579999988
Q ss_pred Hh
Q 005387 224 DY 225 (699)
Q Consensus 224 aY 225 (699)
.+
T Consensus 125 ~~ 126 (336)
T TIGR01902 125 KN 126 (336)
T ss_pred hc
Confidence 74
No 52
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=88.89 E-value=4.8 Score=44.05 Aligned_cols=116 Identities=17% Similarity=0.238 Sum_probs=70.7
Q ss_pred HHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcC
Q 005387 76 KLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRA 155 (699)
Q Consensus 76 ~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrA 155 (699)
++.++|-+....+.. +.+..+||.++|+++|+++.... ..+.|+++.+..
T Consensus 3 ~~~~~L~~ips~s~~-E~~~a~~l~~~l~~~g~~~~~~~-----------------------------~~~~~vva~~~~ 52 (363)
T TIGR01891 3 DIRRHLHEHPELSFE-EFKTSSLIAEALESLGIEVRRGV-----------------------------GGATGVVATIGG 52 (363)
T ss_pred HHHHHHhcCCCCCCc-hHHHHHHHHHHHHHcCCceEecC-----------------------------CCCcEEEEEEeC
Confidence 345566565554433 34789999999999999875310 023688888754
Q ss_pred CCCCCceeEEEEEeeccCCC-------------Cc----cchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCCCchh
Q 005387 156 PRGDGKEAIVLVTPYNAVKG-------------GV----RETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAP 217 (699)
Q Consensus 156 PRgdgtEaiVL~ap~~~~~~-------------~~----~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g~~~G 217 (699)
.. ++ -.|++....|..-. +. ....+++.+++.++.+++.. =.-+||.|+++-+++. ..|
T Consensus 53 ~~-~~-~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~~G 129 (363)
T TIGR01891 53 GK-PG-PVVALRADMDALPIQEQTDLPYKSTNPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEG-GGG 129 (363)
T ss_pred CC-CC-CEEEEEeccCCCCcccccCCCcccCCCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcC-cch
Confidence 21 12 46888887765310 00 00134666677777776532 2357999999643332 268
Q ss_pred HHHHHHH
Q 005387 218 VAAWLRD 224 (699)
Q Consensus 218 ~~AWL~a 224 (699)
++.++++
T Consensus 130 ~~~~~~~ 136 (363)
T TIGR01891 130 ATKMIED 136 (363)
T ss_pred HHHHHHC
Confidence 8888765
No 53
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=88.28 E-value=4.6 Score=43.68 Aligned_cols=113 Identities=16% Similarity=0.161 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHc-CCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEE
Q 005387 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNL-GAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~l-Gle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvyg 151 (699)
+..++.+++-+....+.+ ..+..+||.++|+++ |+++.. .|.|+++
T Consensus 8 ~~~~~l~~li~ips~s~~-e~~~~~~l~~~l~~~~~~~~~~--------------------------------~~~~~~~ 54 (352)
T PRK13007 8 DLAELTAALVDIPSVSGD-EKALADAVEAALRALPHLEVIR--------------------------------HGNSVVA 54 (352)
T ss_pred HHHHHHHHHhcCCCCCch-HHHHHHHHHHHHHhCcCceEEe--------------------------------cCCeEEE
Confidence 345556666555554433 336789999999996 765431 2458888
Q ss_pred EEcCCCCCCceeEEEEEeeccCC-----------------CCccchhhHHHHHHHHHHHhcCCccccceEEEee-CCCCC
Q 005387 152 IIRAPRGDGKEAIVLVTPYNAVK-----------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVA-DSQYG 213 (699)
Q Consensus 152 IlrAPRgdgtEaiVL~ap~~~~~-----------------~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~-D~~~g 213 (699)
.... +.+ ..|++.+++|..- +..+...+++.+++.++.+++ ..++|.|+++ |.+.+
T Consensus 55 ~~~~--~~~-~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~---~~~~i~~~~~~~EE~~ 128 (352)
T PRK13007 55 RTDL--GRP-SRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKSGLAVMLHLAATLAE---PAHDLTLVFYDCEEVE 128 (352)
T ss_pred EccC--CCC-CeEEEEccccccCCCCCCCcceeCCEEEccCcccccHHHHHHHHHHHHhhc---cCCCeEEEEEeccccc
Confidence 8732 222 2599988876532 112335688888888888853 4679999985 54322
Q ss_pred -CchhHHHHHHH
Q 005387 214 -EYAPVAAWLRD 224 (699)
Q Consensus 214 -~~~G~~AWL~a 224 (699)
+..|+...++.
T Consensus 129 ~~~~G~~~~~~~ 140 (352)
T PRK13007 129 AEANGLGRLARE 140 (352)
T ss_pred CCcccHHHHHHh
Confidence 22577777664
No 54
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=86.87 E-value=21 Score=41.24 Aligned_cols=182 Identities=13% Similarity=0.113 Sum_probs=95.9
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
.-++.++|-+....+.+ .....+|+.++++++|+++.... . -|+++..
T Consensus 12 ~~~~l~~Lv~ips~S~~-e~~~~~~l~~~~~~~G~~~~~d~------------------------------~-gnvi~~~ 59 (485)
T PRK15026 12 LWDIFAKICSIPHPSYH-EEQLAEYIVGWAKEKGFHVERDQ------------------------------V-GNILIRK 59 (485)
T ss_pred HHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHhCCCEEEEEe------------------------------c-CeEEEEE
Confidence 44555666666544333 34689999999999999876321 1 2777766
Q ss_pred cCCCC-CCceeEEEEEeeccCC---------------------------CC---ccchhhHHHHHHHHHHHhcCCccccc
Q 005387 154 RAPRG-DGKEAIVLVTPYNAVK---------------------------GG---VRETLSLGIAYSVFSLLTRVTWLAKD 202 (699)
Q Consensus 154 rAPRg-dgtEaiVL~ap~~~~~---------------------------~~---~~~~~sval~LaLa~yl~r~~~wAKD 202 (699)
.+..+ .+...++|..+.|..- +. .+...|++.+++++ +.......+
T Consensus 60 ~~~~g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~~~~~ 136 (485)
T PRK15026 60 PATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENVVHGP 136 (485)
T ss_pred cCCCCCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCCCCCC
Confidence 55333 3445677766654321 00 12233455555443 433344679
Q ss_pred eEEEeeCCCCCCchhHHHHHHHhcCCCCCCCcccccccccCCCCCcccccc--cccccccceeeeeEEeecCC--CCCcc
Q 005387 203 IIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKIS--YGIRRSGTMAAALVLGVAYG--NENED 278 (699)
Q Consensus 203 IIfl~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~raG~IqaAl~le~~~~--~~~~~ 278 (699)
|.++|+-+++-+..|.++....+-.+ .-.++- |+.+. .....+|.+..-..+.+... .....
T Consensus 137 i~~l~t~dEE~G~~ga~~l~~~~~~~----~~~i~~----------e~~~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~ 202 (485)
T PRK15026 137 LEVLLTMTEEAGMDGAFGLQSNWLQA----DILINT----------DSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFE 202 (485)
T ss_pred EEEEEEcccccCcHhHHHhhhccCCc----CEEEEe----------CCCCCCeEEEeCCCcceEEEEEEEEEEecCCCce
Confidence 99999644333346777765433221 111111 11000 12245666654444443331 01346
Q ss_pred eEEEEeecCC----CCCCchhHHHHHHHHH
Q 005387 279 TLGIYAEASN----GQMPNLDLINIVHYLA 304 (699)
Q Consensus 279 ~l~I~~eG~N----GqLPNLDLiN~v~~ia 304 (699)
.+.|.+.|+. |.-|+...-|.+..++
T Consensus 203 ~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la 232 (485)
T PRK15026 203 TFKLTLKGLKGGHSGGEIHVGLGNANKLLV 232 (485)
T ss_pred EEEEEEECCCCcCChHHHCCCCccHHHHHH
Confidence 7899999955 3345555446655444
No 55
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=86.45 E-value=11 Score=41.76 Aligned_cols=116 Identities=11% Similarity=0.044 Sum_probs=68.3
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+...-+.+ .....++|.++|+++|+++.... ...|++|.+
T Consensus 15 ~~~~l~~Lv~ips~s~~-e~~~~~~l~~~l~~~g~~~~~~~------------------------------~~~~v~~~~ 63 (395)
T TIGR03526 15 MIRFLRDLVAIPSESGD-EGRVALRIKQEMEKLGFDKVEID------------------------------PMGNVLGYI 63 (395)
T ss_pred HHHHHHHHhcCCCCCCc-hHHHHHHHHHHHHHcCCceEEEc------------------------------CCCcEEEEe
Confidence 44555555555544333 23678999999999998742110 113788877
Q ss_pred cCCCCCCceeEEEEEeeccCC------------------------CCccchhhHHHHHHHHHHHhcCCc-cccceEEEee
Q 005387 154 RAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVA 208 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~------------------------~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~ 208 (699)
. ++...+++.+.+|... +..+...+++.++..++.+++... ..+|++++++
T Consensus 64 g----~~~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~ 139 (395)
T TIGR03526 64 G----HGPKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGT 139 (395)
T ss_pred C----CCCCEEEEEeeccccCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEe
Confidence 2 3445688877775421 111224567777877788876543 4668988886
Q ss_pred CCCC-CCchhHHHHHHH
Q 005387 209 DSQY-GEYAPVAAWLRD 224 (699)
Q Consensus 209 D~~~-g~~~G~~AWL~a 224 (699)
.+++ +.-.|.+..+++
T Consensus 140 ~dEE~~~g~~~~~~~~~ 156 (395)
T TIGR03526 140 VQEEDCDGLCWQYIIEE 156 (395)
T ss_pred cccccCCcHhHHHHHhc
Confidence 4333 122345556654
No 56
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=86.33 E-value=8.7 Score=42.00 Aligned_cols=114 Identities=18% Similarity=0.147 Sum_probs=64.9
Q ss_pred HHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCC
Q 005387 77 LIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAP 156 (699)
Q Consensus 77 y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAP 156 (699)
+.++|-+....+.+ ..+..++|+++|+++|+++..++.. ...|+++..
T Consensus 4 ~l~~lv~ips~s~~-e~~~~~~i~~~l~~~G~~~~~~~~~----------------------------~~~~~~~~~--- 51 (370)
T TIGR01246 4 LAKELISRPSVTPN-DAGCQDIIAERLEKLGFEIEWMHFG----------------------------DTKNLWATR--- 51 (370)
T ss_pred HHHHHhcCCCCCcc-hHHHHHHHHHHHHHCCCEEEEEecC----------------------------CCceEEEEe---
Confidence 34445444443332 2357899999999999997654310 124787763
Q ss_pred CCCCceeEEEEEeeccCCCC------------------------ccchhhHHHH-HHHHHHHhcCCccccceEEEeeCCC
Q 005387 157 RGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIA-YSVFSLLTRVTWLAKDIIWLVADSQ 211 (699)
Q Consensus 157 RgdgtEaiVL~ap~~~~~~~------------------------~~~~~sval~-LaLa~yl~r~~~wAKDIIfl~~D~~ 211 (699)
+.+...+++..++|....+ .+...+++.+ .++.++.+...-+.++|+|+++-++
T Consensus 52 -g~~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dE 130 (370)
T TIGR01246 52 -GTGEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDE 130 (370)
T ss_pred -cCCCcEEEEEccccccCCCCccccccCCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEecc
Confidence 2233568888777653210 0222344444 4444444544456889999995333
Q ss_pred C-CCchhHHHHHH
Q 005387 212 Y-GEYAPVAAWLR 223 (699)
Q Consensus 212 ~-g~~~G~~AWL~ 223 (699)
+ +...|.+.-++
T Consensus 131 E~~~~~G~~~~~~ 143 (370)
T TIGR01246 131 EGTAIDGTKKVVE 143 (370)
T ss_pred ccCCCcCHHHHHH
Confidence 3 22357777664
No 57
>PLN02280 IAA-amino acid hydrolase
Probab=85.47 E-value=11 Score=43.33 Aligned_cols=98 Identities=9% Similarity=0.115 Sum_probs=63.4
Q ss_pred cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 93 ~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
.+..++|.++|+++|+++..+ ..++|++|.+ . ++.+ -.+++.+.+|.
T Consensus 117 ~~t~~~i~~~L~~~G~~~~~~------------------------------~~~~~vva~~-g-~~~~-~~I~l~gh~Da 163 (478)
T PLN02280 117 YKTSELVRSELDRMGIMYRYP------------------------------LAKTGIRAWI-G-TGGP-PFVAVRADMDA 163 (478)
T ss_pred HHHHHHHHHHHHHCCCeEEec------------------------------CCCCEEEEEE-C-CCCC-CEEEEEEecCC
Confidence 357899999999999986531 1257999987 2 1223 56888887754
Q ss_pred CCCC--------c---------cchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCCCchhHHHHHHH
Q 005387 173 VKGG--------V---------RETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRD 224 (699)
Q Consensus 173 ~~~~--------~---------~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g~~~G~~AWL~a 224 (699)
.-.+ + .-...++.++++++++++.. =+.-+|.|+|+-+++.. .|.++-+++
T Consensus 164 VP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g-~Ga~~li~~ 232 (478)
T PLN02280 164 LPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAG-NGAKRMIGD 232 (478)
T ss_pred CcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEeccccccc-chHHHHHHC
Confidence 2110 0 01136788888889987543 24669999996443322 377777764
No 58
>PRK08554 peptidase; Reviewed
Probab=85.36 E-value=12 Score=42.65 Aligned_cols=87 Identities=15% Similarity=0.235 Sum_probs=56.6
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..+++.++|+++|+++..+.. . ...|+++... .+.+.+++..++|..
T Consensus 28 ~~~~~l~~~l~~~G~~~~~~~~---------------------------~-~~~~l~~~~~----~~~~~l~l~gH~DtV 75 (438)
T PRK08554 28 ECPKFIKDTLESWGIESELIEK---------------------------D-GYYAVYGEIG----EGKPKLLFMAHFDVV 75 (438)
T ss_pred HHHHHHHHHHHHCCCeEEEEec---------------------------C-CceEEEEEeC----CCCCEEEEEeccccC
Confidence 5689999999999998764431 0 1257777752 233568887766542
Q ss_pred CC-----------------------CccchhhHHHHHHHHHHHhcCCccccceEEEee-CCCCC
Q 005387 174 KG-----------------------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVA-DSQYG 213 (699)
Q Consensus 174 ~~-----------------------~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~-D~~~g 213 (699)
-. ..+...+++.++..++.+++.. +.++|.|+++ |.+.|
T Consensus 76 p~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~-~~~~i~l~~~~dEE~g 138 (438)
T PRK08554 76 PVNPEEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEP-LNGKVIFAFTGDEEIG 138 (438)
T ss_pred CCCccccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcC-CCCCEEEEEEcccccC
Confidence 11 1123457887777788887765 5789999995 54333
No 59
>PRK07318 dipeptidase PepV; Reviewed
Probab=83.18 E-value=12 Score=42.70 Aligned_cols=46 Identities=15% Similarity=0.295 Sum_probs=31.9
Q ss_pred chhhHHHHHHHHHHHhcCC-ccccceEEEee-CCCCCCchhHHHHHHHh
Q 005387 179 ETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA-DSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 179 ~~~sval~LaLa~yl~r~~-~wAKDIIfl~~-D~~~g~~~G~~AWL~aY 225 (699)
...+++.++..++.+++.. -+.+||.|+++ |-+.| ..|++.+++.+
T Consensus 119 mKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g-~~G~~~l~~~~ 166 (466)
T PRK07318 119 DKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESG-WKCMDYYFEHE 166 (466)
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccC-chhHHHHHHhC
Confidence 3456777777677777543 35789999995 54433 46999999874
No 60
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=80.54 E-value=26 Score=38.85 Aligned_cols=101 Identities=13% Similarity=0.095 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+...-+.+ ..+..+||.++|+++|+++.... ...|++|.+
T Consensus 15 ~~~~~~~lv~i~s~s~~-e~~~~~~l~~~l~~~G~~~~~~~------------------------------~~~n~~~~~ 63 (395)
T TIGR03320 15 MIRFLRDLVAIPSESGD-EKRVAERIKEEMEKLGFDKVEID------------------------------PMGNVLGYI 63 (395)
T ss_pred HHHHHHHHHcCCCCCCc-hHHHHHHHHHHHHHhCCcEEEEC------------------------------CCCCEEEEe
Confidence 44555555555543332 34678999999999998742100 113778876
Q ss_pred cCCCCCCceeEEEEEeeccCC------------------------CCccchhhHHHHHHHHHHHhcCC-ccccceEEEee
Q 005387 154 RAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA 208 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~------------------------~~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~ 208 (699)
. .+...+++..++|... +..+...+++.++..++.+++.. ....+|+|+++
T Consensus 64 g----~~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~ 139 (395)
T TIGR03320 64 G----HGPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGT 139 (395)
T ss_pred C----CCCcEEEEEecccccCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEec
Confidence 2 2334688877665421 11122457888888888887653 35678888875
Q ss_pred C
Q 005387 209 D 209 (699)
Q Consensus 209 D 209 (699)
.
T Consensus 140 ~ 140 (395)
T TIGR03320 140 V 140 (395)
T ss_pred c
Confidence 3
No 61
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=80.54 E-value=9.1 Score=42.95 Aligned_cols=82 Identities=12% Similarity=0.135 Sum_probs=58.9
Q ss_pred cccceEEEEEcCCCCCCceeEEEEEee----------ccC---CCCccchhhHHHHHHHHHHHhcCCccccceEEEeeCC
Q 005387 144 LYGINTVGIIRAPRGDGKEAIVLVTPY----------NAV---KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADS 210 (699)
Q Consensus 144 ~~G~NvygIlrAPRgdgtEaiVL~ap~----------~~~---~~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~ 210 (699)
....|+.+...+. .-..++++..+.+ ++. .+..+++.|++..|.+||+|++.. --++|.|++.+.
T Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~~-p~~~v~f~~~~a 259 (435)
T COG2234 182 LTSKNVAATISGS-SQIIEAIIGTAHSDSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGNP-PKRTVRFVAFGA 259 (435)
T ss_pred eEEEEEeeeeecc-cccceEEEeccCCCceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcCC-CCceEEEEEecc
Confidence 4566666666665 3345555555544 331 133466789999999999999888 467999999988
Q ss_pred CCCCchhHHHHHHHhcC
Q 005387 211 QYGEYAPVAAWLRDYHT 227 (699)
Q Consensus 211 ~~g~~~G~~AWL~aYH~ 227 (699)
++....|-+++++.|..
T Consensus 260 EE~Gl~GS~~~~~~~~~ 276 (435)
T COG2234 260 EESGLLGSEAYVKRLSK 276 (435)
T ss_pred hhhcccccHHHHhcCCc
Confidence 76677899999888774
No 62
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=77.17 E-value=8.1 Score=43.68 Aligned_cols=80 Identities=18% Similarity=0.334 Sum_probs=55.2
Q ss_pred cccceEEEEEc-CCC--CC--CceeEEEEEeeccCC-------CCccchhhHHHHHHHHHHHhcC----Ccc-ccceEEE
Q 005387 144 LYGINTVGIIR-APR--GD--GKEAIVLVTPYNAVK-------GGVRETLSLGIAYSVFSLLTRV----TWL-AKDIIWL 206 (699)
Q Consensus 144 ~~G~NvygIlr-APR--gd--gtEaiVL~ap~~~~~-------~~~~~~~sval~LaLa~yl~r~----~~w-AKDIIfl 206 (699)
..=.|+.|.+- +-| || .--.|+++++||+-. +.+.+..|+...|-|++.|++- +-- .-++.|+
T Consensus 191 ~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~ 270 (555)
T KOG2526|consen 191 YKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFI 270 (555)
T ss_pred CccceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEE
Confidence 35579999998 666 33 345799999998632 1223345777778888888642 111 3488899
Q ss_pred eeCCCCCCchhHHHHHH
Q 005387 207 VADSQYGEYAPVAAWLR 223 (699)
Q Consensus 207 ~~D~~~g~~~G~~AWL~ 223 (699)
.+++.--.+.|++-|||
T Consensus 271 lt~aG~lNyqGTkkWLe 287 (555)
T KOG2526|consen 271 LTAAGKLNYQGTKKWLE 287 (555)
T ss_pred EccCccccccchhhhhh
Confidence 99864345799999999
No 63
>PRK07079 hypothetical protein; Provisional
Probab=74.72 E-value=49 Score=37.71 Aligned_cols=126 Identities=10% Similarity=-0.007 Sum_probs=72.3
Q ss_pred HHHHHHHHHhhhcCCCC--CccchHHHH----HHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccc
Q 005387 74 ANKLIKELNNLHSNPLG--ATTESHGII----AKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~--~~~~~~~~l----~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~ 147 (699)
+.++.++|-+....+.. ...+..+++ .++|+++|+++..+.... .-...
T Consensus 19 ~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~-------------------------~~~~~ 73 (469)
T PRK07079 19 FFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPV-------------------------AGGGP 73 (469)
T ss_pred HHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCC-------------------------CCCCC
Confidence 34444555554443321 112345555 568999999987543110 01246
Q ss_pred eEEEEEcCCCCCCceeEEEEEeeccCCC-------------------------CccchhhHHHHHHHHHHHhc-C-Cccc
Q 005387 148 NTVGIIRAPRGDGKEAIVLVTPYNAVKG-------------------------GVRETLSLGIAYSVFSLLTR-V-TWLA 200 (699)
Q Consensus 148 NvygIlrAPRgdgtEaiVL~ap~~~~~~-------------------------~~~~~~sval~LaLa~yl~r-~-~~wA 200 (699)
||++.++. +.+...++|..++|..-. ..+...+++..++.++.+++ . .=+.
T Consensus 74 ~vva~~~~--~~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~ 151 (469)
T PRK07079 74 FLIAERIE--DDALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLG 151 (469)
T ss_pred EEEEEeCC--CCCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCC
Confidence 89888643 122346888777653210 11234577777766676643 2 3357
Q ss_pred cceEEEeeCCCCCCchhHHHHHHHhc
Q 005387 201 KDIIWLVADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 201 KDIIfl~~D~~~g~~~G~~AWL~aYH 226 (699)
.+|.|+++-+++....|++..++++.
T Consensus 152 ~~i~~~~~~dEE~g~~G~~~l~~~~~ 177 (469)
T PRK07079 152 FNVKLLIEMGEEIGSPGLAEVCRQHR 177 (469)
T ss_pred CCEEEEEECccccCCccHHHHHHHhH
Confidence 79999996443334469999999874
No 64
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=69.96 E-value=37 Score=38.71 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=31.5
Q ss_pred hhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCCCchhHHHHHHHhc
Q 005387 180 TLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 180 ~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g~~~G~~AWL~aYH 226 (699)
..+++.++..++.+++... +.++|.|+++-+++....|++.+++..+
T Consensus 108 KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 155 (447)
T TIGR01887 108 KGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEE 155 (447)
T ss_pred cHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcC
Confidence 4456666666677765443 4679999996333344579999998643
No 65
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=66.77 E-value=72 Score=36.51 Aligned_cols=48 Identities=13% Similarity=0.200 Sum_probs=32.1
Q ss_pred cchhhHHHHHHHHHHHhcCC-ccccceEEEee-CCCCCCchhHHHHHHHhc
Q 005387 178 RETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA-DSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 178 ~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~-D~~~g~~~G~~AWL~aYH 226 (699)
+...+++.++..++.+++.. -+.+||.|+++ |.+. ...|++.++++..
T Consensus 117 D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-g~~g~~~~~~~~~ 166 (466)
T TIGR01886 117 DDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEET-GWVDMDYYFKHEE 166 (466)
T ss_pred ccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECcccc-CcccHHHHHhcCc
Confidence 33455666665567776544 46889999996 5333 4579999998543
No 66
>PRK06156 hypothetical protein; Provisional
Probab=66.76 E-value=81 Score=36.66 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=33.6
Q ss_pred hhhHHHHHHHHHHHhcCC-ccccceEEEee-CCCCCCchhHHHHHHHhcCC
Q 005387 180 TLSLGIAYSVFSLLTRVT-WLAKDIIWLVA-DSQYGEYAPVAAWLRDYHTP 228 (699)
Q Consensus 180 ~~sval~LaLa~yl~r~~-~wAKDIIfl~~-D~~~g~~~G~~AWL~aYH~~ 228 (699)
..+++.++..++++++.. =+.++|.|+|+ |-+. ...|++.++++++.+
T Consensus 156 Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-g~~G~~~~~~~~~~~ 205 (520)
T PRK06156 156 KGAIVTALYAMKAIKDSGLPLARRIELLVYTTEET-DGDPLKYYLERYTPP 205 (520)
T ss_pred hHHHHHHHHHHHHHHHcCCCCCceEEEEEeccccc-CchhHHHHHHhcCCC
Confidence 457777766667776543 34689999996 5433 346999999988653
No 67
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=63.42 E-value=41 Score=37.75 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=47.6
Q ss_pred ccceEEEEEcCCCCCCceeEEEEEeeccCCCCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHH
Q 005387 145 YGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRD 224 (699)
Q Consensus 145 ~G~NvygIlrAPRgdgtEaiVL~ap~~~~~~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~a 224 (699)
.|.=.||=+-= +|...|-|++++..-...-..|+..|++++..||+++++.+-. --.=|||.- +-.|.-+||..
T Consensus 114 ~G~L~ygE~~i-pG~s~~EillsthiCHPsmANdnLSG~~v~~~La~~L~~~~~r-ytYRflf~P----eTIGsI~yLsk 187 (386)
T PF09940_consen 114 DGSLTYGEFVI-PGESDEEILLSTHICHPSMANDNLSGPAVLTFLAKWLKQLPNR-YTYRFLFVP----ETIGSITYLSK 187 (386)
T ss_dssp S-EEEEEEEEE---SSS-EEEEEEE----S-TTTTHHHHHHHHHHHHHHTTS--S-SEEEEEEE-----TTHHHHHHHHH
T ss_pred CCceeEEEEEe-cCCCCCeEEEEEeccCcccccccccHHHHHHHHHHHHhcCCcC-ceEEEEEcc----ccHHHHHHHHH
Confidence 45555554443 4799999999998865544455678999999999999865443 555666643 45899999996
Q ss_pred hcC
Q 005387 225 YHT 227 (699)
Q Consensus 225 YH~ 227 (699)
..+
T Consensus 188 n~~ 190 (386)
T PF09940_consen 188 NLD 190 (386)
T ss_dssp -GG
T ss_pred CHH
Confidence 544
No 68
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=63.40 E-value=22 Score=42.98 Aligned_cols=85 Identities=12% Similarity=0.210 Sum_probs=59.2
Q ss_pred ccccceEEEEEcCCCCCCceeEEEEEeeccCCCC-ccchhhHHHHHHHHHHHh---cCCcc-ccceEEEeeCCCCCCchh
Q 005387 143 SLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGG-VRETLSLGIAYSVFSLLT---RVTWL-AKDIIWLVADSQYGEYAP 217 (699)
Q Consensus 143 ~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~~~-~~~~~sval~LaLa~yl~---r~~~w-AKDIIfl~~D~~~g~~~G 217 (699)
...=.||.|.++.. ...--.+||-++.|+...+ .+.+.|.++++.+++++. +..|= .|-|+|..=|.++.+..|
T Consensus 335 ~~ki~NIig~I~Gs-~epD~~ViigahrDSw~~Ga~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~sWdAeEfGliG 413 (702)
T KOG2195|consen 335 ETKIQNIIGKIEGS-EEPDRYVIIGAHRDSWTFGAIDPNSGTALLLEIARALSKLKKRGWRPRRTILFASWDAEEFGLLG 413 (702)
T ss_pred eeeeeeEEEEEecC-cCCCeEEEEeccccccccCCcCCCccHHHHHHHHHHHHHHHHcCCCccceEEEEEccchhccccc
Confidence 35678999999972 3334467777777776532 333567887777777763 22332 477778777987777899
Q ss_pred HHHHHHHhcCC
Q 005387 218 VAAWLRDYHTP 228 (699)
Q Consensus 218 ~~AWL~aYH~~ 228 (699)
--.|+++|-..
T Consensus 414 StE~~E~~~~~ 424 (702)
T KOG2195|consen 414 STEWAEEYLKN 424 (702)
T ss_pred cHHHHHHHHHH
Confidence 99999999764
No 69
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=61.38 E-value=48 Score=36.61 Aligned_cols=46 Identities=13% Similarity=0.048 Sum_probs=31.0
Q ss_pred hhhHHHHHHHHHHHhc---CCccccceEEEeeCCCC-C-CchhHHHHHHHh
Q 005387 180 TLSLGIAYSVFSLLTR---VTWLAKDIIWLVADSQY-G-EYAPVAAWLRDY 225 (699)
Q Consensus 180 ~~sval~LaLa~yl~r---~~~wAKDIIfl~~D~~~-g-~~~G~~AWL~aY 225 (699)
..+++.++..++.+++ ..=+..||.|+++.+++ + +..|+...++.+
T Consensus 105 Kgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~ 155 (373)
T TIGR01900 105 KAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAH 155 (373)
T ss_pred hHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhC
Confidence 3578888888887742 22358899999974433 2 235888888764
No 70
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=49.60 E-value=2.5e+02 Score=32.50 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=80.2
Q ss_pred HHHHHHHHHHhhhcCCCC-CccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEE
Q 005387 73 EANKLIKELNNLHSNPLG-ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~-~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvyg 151 (699)
+++++.-++-.+..-.++ +.-...+.|...+.++ .|.|+ ||-..+..+ .+|. .+...||+|
T Consensus 9 ~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~---pYFqe--------hped~~~~p-----i~nD--pygR~nv~A 70 (553)
T COG4187 9 RVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGEL---PYFQE--------HPEDLWLQP-----IHND--PYGRRNVFA 70 (553)
T ss_pred HHHHHHHHHeeccccCCCcccccHHHHHHHHHhcC---chhhh--------ChHhhcccC-----CCCC--ccccceeEE
Confidence 466666666665544332 1224677777776665 23332 121111110 1121 235679999
Q ss_pred EEcCCCCCCceeEEEEEeeccCCCC---------------------------------------------ccchhhHHHH
Q 005387 152 IIRAPRGDGKEAIVLVTPYNAVKGG---------------------------------------------VRETLSLGIA 186 (699)
Q Consensus 152 IlrAPRgdgtEaiVL~ap~~~~~~~---------------------------------------------~~~~~sval~ 186 (699)
.+|. +.++-.+|+..++|....+ .+-..|++..
T Consensus 71 lVrg--~~~k~tvvl~gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~ 148 (553)
T COG4187 71 LVRG--GTSKRTVVLHGHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVH 148 (553)
T ss_pred EEec--CCCCceEEEeeccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHH
Confidence 9999 7888999999998764211 0112477777
Q ss_pred HHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHhcC
Q 005387 187 YSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHT 227 (699)
Q Consensus 187 LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aYH~ 227 (699)
++..+-|....-..-++.|+-+-+++-+..||++=+.+--.
T Consensus 149 la~L~~fa~~~~~~GNlLf~a~pdEE~~s~G~r~a~~~L~~ 189 (553)
T COG4187 149 LACLEEFAARTDRQGNLLFMAVPDEEVESRGMREARPALPG 189 (553)
T ss_pred HHHHHHHhhCCCCCCcEEEEeccchhhhcccHHHHHHHHHH
Confidence 77666665446668889998753334467888887766544
No 71
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=49.41 E-value=1.7e+02 Score=33.18 Aligned_cols=117 Identities=15% Similarity=0.113 Sum_probs=68.2
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..+++++|.+...-..+. ..-.++|.++|+++|.|+... ..-++-+.|.+
T Consensus 14 l~~~rr~lH~~PEL~f~E-~~Ta~~i~~~L~~~g~~~~~~-----------------------------~~~~TGvva~~ 63 (392)
T COG1473 14 LIEWRRDLHEHPELGFEE-YRTAAYIAEKLEELGFEVVEV-----------------------------GGGKTGVVATL 63 (392)
T ss_pred HHHHHHHHhhCCccchhH-HHHHHHHHHHHHHcCCeeEec-----------------------------cCCceEEEEEE
Confidence 445556665555443332 234789999999999983211 01236677888
Q ss_pred cCCCCCCceeEEEEEeeccC-------------CCCc----cchhhHHHHHHHHHHHhcC-CccccceEEEeeCCCCCCc
Q 005387 154 RAPRGDGKEAIVLVTPYNAV-------------KGGV----RETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGEY 215 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~-------------~~~~----~~~~sval~LaLa~yl~r~-~~wAKDIIfl~~D~~~g~~ 215 (699)
+...... .|.|=+-+|-- +.+. .-..-.+.+|..|++|++. .=+.-.+.|+|--.+++.-
T Consensus 64 ~~g~~g~--tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~ 141 (392)
T COG1473 64 KGGKPGP--TIALRADMDALPIQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGG 141 (392)
T ss_pred cCCCCCC--EEEEEeecccCccccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccc
Confidence 8654433 88888877531 1110 0012345566777888765 5668999999954443321
Q ss_pred hhHHHHHH
Q 005387 216 APVAAWLR 223 (699)
Q Consensus 216 ~G~~AWL~ 223 (699)
|.+.=++
T Consensus 142 -Ga~~mi~ 148 (392)
T COG1473 142 -GAKAMIE 148 (392)
T ss_pred -cHHHHHh
Confidence 5444444
No 72
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=48.75 E-value=2.9e+02 Score=30.77 Aligned_cols=98 Identities=6% Similarity=-0.031 Sum_probs=61.9
Q ss_pred chhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHhcCCCCCCCcccccccccCCCCCccccccccccc
Q 005387 179 ETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRR 258 (699)
Q Consensus 179 ~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 258 (699)
+-.|++.++-++|.+++.+ ...|+.+++|=+++=+..|.+. -+|+-.+ +
T Consensus 179 dR~g~a~l~e~l~~l~~~~-~~~~l~~~~tvqEEvG~rGA~~--aa~~i~p------------------------D---- 227 (350)
T TIGR03107 179 NRYGVLMILELLESLKDQE-LPNTLIAGANVQEEVGLRGAHV--STTKFNP------------------------D---- 227 (350)
T ss_pred cHHHHHHHHHHHHHhhhcC-CCceEEEEEEChhhcCchhhhh--HHhhCCC------------------------C----
Confidence 3468999999999998665 4789999998554333455543 4554321 1
Q ss_pred ccceeeeeEEeecCCCCCcc--------eEEEEeecCCCCCCchhHHHHHHHHHhhccCceeeE
Q 005387 259 SGTMAAALVLGVAYGNENED--------TLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKV 314 (699)
Q Consensus 259 aG~IqaAl~le~~~~~~~~~--------~l~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~~~l 314 (699)
.||++|+....+..+ -.-|. -.-.|-.+|-.+.+-+..+|. +.|+++..
T Consensus 228 -----~aI~vDv~~~~d~~~~~~~~lg~Gp~i~-~~D~~~i~~~~l~~~l~~~A~-~~~I~~Q~ 284 (350)
T TIGR03107 228 -----IFFAVDCSPAGDIYGDQGGKLGEGTLLR-FFDPGHIMLPRMKDFLLTTAE-EAGIKYQY 284 (350)
T ss_pred -----EEEEEecCCcCCCCCCCccccCCCceEE-EecCCCCCCHHHHHHHHHHHH-HcCCCcEE
Confidence 456666544322111 11221 112488999999999999996 78888765
No 73
>PRK08737 acetylornithine deacetylase; Provisional
Probab=48.59 E-value=1.8e+02 Score=32.03 Aligned_cols=112 Identities=13% Similarity=0.080 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhhhcCCCC---CccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceE
Q 005387 73 EANKLIKELNNLHSNPLG---ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINT 149 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~---~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nv 149 (699)
.+.++.++|=+....+.. ...+..+++.++|+ |+++..... .....|+
T Consensus 7 ~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~---------------------------~~~~~nl 57 (364)
T PRK08737 7 STLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDH---------------------------GAGAVSL 57 (364)
T ss_pred HHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecC---------------------------CCCceEE
Confidence 345566666555543211 12356788888886 887654321 0123588
Q ss_pred EEEEcCCCCCCceeEEEEEeeccCCC----------------------CccchhhHHHHHHHHHHHhcCCccccceEEEe
Q 005387 150 VGIIRAPRGDGKEAIVLVTPYNAVKG----------------------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLV 207 (699)
Q Consensus 150 ygIlrAPRgdgtEaiVL~ap~~~~~~----------------------~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~ 207 (699)
++.. + ...++|..+.|.... ..+-..+++.+++.++. .-.||.|++
T Consensus 58 i~~~----g--~~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~------~~~~v~~~~ 125 (364)
T PRK08737 58 YAVR----G--TPKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA------GDGDAAFLF 125 (364)
T ss_pred EEEc----C--CCeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc------cCCCEEEEE
Confidence 8752 2 246999887765321 01112466666655442 246999999
Q ss_pred e-CCCCCCchhHHHHHHHh
Q 005387 208 A-DSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 208 ~-D~~~g~~~G~~AWL~aY 225 (699)
+ |.+.|...|++.++++.
T Consensus 126 ~~dEE~g~~~g~~~~~~~~ 144 (364)
T PRK08737 126 SSDEEANDPRCVAAFLARG 144 (364)
T ss_pred EcccccCchhhHHHHHHhC
Confidence 6 43333346888888764
No 74
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=47.66 E-value=80 Score=37.31 Aligned_cols=40 Identities=23% Similarity=0.325 Sum_probs=30.2
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 005387 572 TLKSATISSF-FIGLGLMSVINFATAEIGALLMVPMALMAH 611 (699)
Q Consensus 572 ~lk~~~Ll~~-~~~l~~la~lNFsLa~~~al~~vPl~l~~~ 611 (699)
..|....+.. ..++..+.+.||+++.+++++.+|+.++..
T Consensus 466 ~~~~~~v~~~~~~v~~~~~~~n~~ll~lv~~l~~pi~fi~~ 506 (617)
T KOG3566|consen 466 LLLIVFVLPFSSLVLPGLCLTNFALLKLVTILAVPIQFIMT 506 (617)
T ss_pred HhhhheeeccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 3344444444 366778889999999999999999998654
No 75
>PRK09864 putative peptidase; Provisional
Probab=47.31 E-value=3.7e+02 Score=30.06 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=60.0
Q ss_pred chhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHhcCCCCCCCcccccccccCCCCCccccccccccc
Q 005387 179 ETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRR 258 (699)
Q Consensus 179 ~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 258 (699)
+-.|++.++-++|.++. ...|+.+++|=+++-+..|.+. -+|.=.+ +
T Consensus 176 nR~g~~~lle~l~~l~~---~~~~vy~v~TvQEEvGlrGA~~--aa~~i~P------------------------D---- 222 (356)
T PRK09864 176 NRIGCAMMAELLQTVNN---PEITLYGVGSVEEEVGLRGAQT--SAEHIKP------------------------D---- 222 (356)
T ss_pred cHHHHHHHHHHHHHhhc---CCCeEEEEEEcchhcchHHHHH--HHhcCCC------------------------C----
Confidence 34688888888888865 6789999998654333444443 3333211 0
Q ss_pred ccceeeeeEEeecCCCCCc--ce----E------EE-EeecCCCCCCchhHHHHHHHHHhhccCceeeEe
Q 005387 259 SGTMAAALVLGVAYGNENE--DT----L------GI-YAEASNGQMPNLDLINIVHYLAVHRQGLRVKVE 315 (699)
Q Consensus 259 aG~IqaAl~le~~~~~~~~--~~----l------~I-~~eG~NGqLPNLDLiN~v~~ia~~~~g~~~~l~ 315 (699)
-||++|+....+.. +. . -| .++ .|-.+|-.+.+-+..+|. +.|+++.+.
T Consensus 223 -----iaIavDvt~~~d~p~~~~~~~~~~lG~Gp~i~~~D--~~~i~~~~l~~~l~~~A~-~~~Ip~Q~~ 284 (356)
T PRK09864 223 -----VVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFD--KRYFPNQKLVAALKSCAA-HNDLPLQFS 284 (356)
T ss_pred -----EEEEEecccCCCCCCCcccccccccCCCCeEEEcc--CCccCCHHHHHHHHHHHH-HcCCCceEE
Confidence 26666654322211 01 1 11 122 389999999999999996 788887764
No 76
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=35.46 E-value=1.1e+02 Score=29.47 Aligned_cols=47 Identities=13% Similarity=0.068 Sum_probs=34.7
Q ss_pred cchhhHHHHHHHHHHHh-cCCccccceEEEeeCCCCCCch-hHHHHHHH
Q 005387 178 RETLSLGIAYSVFSLLT-RVTWLAKDIIWLVADSQYGEYA-PVAAWLRD 224 (699)
Q Consensus 178 ~~~~sval~LaLa~yl~-r~~~wAKDIIfl~~D~~~g~~~-G~~AWL~a 224 (699)
+...+++..++.++.++ ...=+.++|+|+++-+++.... |++.++++
T Consensus 36 D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~l~~~ 84 (189)
T PF01546_consen 36 DMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKHLLEE 84 (189)
T ss_dssp TTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhhhhhh
Confidence 34567888888888776 5566699999999644333334 99999997
No 77
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=33.66 E-value=1.9e+02 Score=31.30 Aligned_cols=97 Identities=13% Similarity=0.207 Sum_probs=59.9
Q ss_pred hhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHhc-CCCCCCCcccccccccCCCCCccccccccccc
Q 005387 180 TLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYH-TPAFSNLDSLNTETCHVGNNNFESKISYGIRR 258 (699)
Q Consensus 180 ~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aYH-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 258 (699)
-.|++.++.++|.+++... ..|+.|++|=+++-...|.+.- +|. +|.
T Consensus 136 R~g~~~lle~l~~l~~~~~-~~~v~~v~tvqEEvG~rGA~~a--a~~i~PD----------------------------- 183 (292)
T PF05343_consen 136 RAGCAVLLELLRELKEKEL-DVDVYFVFTVQEEVGLRGAKTA--AFRIKPD----------------------------- 183 (292)
T ss_dssp HHHHHHHHHHHHHHTTSS--SSEEEEEEESSCTTTSHHHHHH--HHHH-CS-----------------------------
T ss_pred hhHHHHHHHHHHHHhhcCC-CceEEEEEEeeeeecCcceeec--ccccCCC-----------------------------
Confidence 4699999999999987654 4999999986654445555543 332 221
Q ss_pred ccceeeeeEEeecCCCC--Ccc-e-------EEEEeecCCCCCCchhHHHHHHHHHhhccCceeeEe
Q 005387 259 SGTMAAALVLGVAYGNE--NED-T-------LGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVE 315 (699)
Q Consensus 259 aG~IqaAl~le~~~~~~--~~~-~-------l~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~~~l~ 315 (699)
.||++|.....+ ..+ . .-|. -+-.+.+||-++.+-+..+|+ +.|+++..+
T Consensus 184 -----~ai~vD~~~a~d~~~~~~~~~~lG~Gp~i~-~~D~~~i~~~~l~~~l~~~A~-~~~Ip~Q~~ 243 (292)
T PF05343_consen 184 -----IAIAVDVTPAGDTPGSDEKEQGLGKGPVIR-VGDSSMIPNPKLVDKLREIAE-ENGIPYQRE 243 (292)
T ss_dssp -----EEEEEEEEEESSSTTSTTTTSCTTS-EEEE-EEETTEESHHHHHHHHHHHHH-HTT--EEEE
T ss_pred -----EEEEEeeeccCCCCCCchhhccCCCCcEEE-EccCCCCCCHHHHHHHHHHHH-HcCCCeEEE
Confidence 344444432211 001 1 1122 334458899999999999997 788998875
No 78
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=26.64 E-value=7.7e+02 Score=28.28 Aligned_cols=100 Identities=15% Similarity=0.152 Sum_probs=61.5
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCC--CceeEEEEEeec
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGD--GKEAIVLVTPYN 171 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgd--gtEaiVL~ap~~ 171 (699)
..++++.++.+.+|+.+.+-+. ..| .|.++=.=+|. .--+++|....|
T Consensus 49 a~~~Fl~~~a~~l~l~~~~i~~----------------------------~p~--~~~~l~T~~GS~P~L~silL~SH~D 98 (420)
T KOG2275|consen 49 ACADFLKKYAKSLGLTVQKIES----------------------------EPG--KYVLLYTWLGSDPELPSILLNSHTD 98 (420)
T ss_pred HHHHHHHHHHHhcCCceeEEEe----------------------------cCc--eeEEEEEeeCCCCCccceeeecccc
Confidence 6789999999999998832211 112 34444443333 345788877543
Q ss_pred cC------------------CC-------CccchhhHHHHHHHHHHHhcCCccccceEEEe-eCCCCCCchhHHHHHH
Q 005387 172 AV------------------KG-------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLV-ADSQYGEYAPVAAWLR 223 (699)
Q Consensus 172 ~~------------------~~-------~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~-~D~~~g~~~G~~AWL~ 223 (699)
.. ++ .+.-..+++..-|+-..+.+-.=|.|+|..++ .|.+.|+..||+-+.+
T Consensus 99 VVP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~ 176 (420)
T KOG2275|consen 99 VVPVFREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAK 176 (420)
T ss_pred ccCCCcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhh
Confidence 21 00 01112456665565444444333899999998 6777777899999987
No 79
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=25.74 E-value=6.8e+02 Score=27.46 Aligned_cols=96 Identities=13% Similarity=0.184 Sum_probs=57.5
Q ss_pred cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 93 ~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
..++++|++.++++|-.|-.+.|+.. .++ + ...=.|+.+-+.. ...+-.|+...|++
T Consensus 72 ~~vr~~i~~~l~~l~w~ve~~~f~~~---------------tp~---g--~~~f~nii~tl~~---~A~r~lVlachyds 128 (338)
T KOG3946|consen 72 RQVRRFIIQHLRNLGWAVETDAFTDN---------------TPL---G--TRNFNNLIATLDP---NASRYLVLACHYDS 128 (338)
T ss_pred HHHHHHHHHHHHhcCceeeecccccc---------------Ccc---e--eeeeeeEEEecCC---Ccchheeeeccccc
Confidence 46799999999999999988887642 111 1 2233466655544 56788999999976
Q ss_pred CCCC-------ccchhhHHHHHHHHHHHhcCC--ccc---cceEEEeeCCC
Q 005387 173 VKGG-------VRETLSLGIAYSVFSLLTRVT--WLA---KDIIWLVADSQ 211 (699)
Q Consensus 173 ~~~~-------~~~~~sval~LaLa~yl~r~~--~wA---KDIIfl~~D~~ 211 (699)
.-.. .+.+..-|+.+-+|+.+.+.- --+ =-+.+||.|++
T Consensus 129 k~~p~~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGE 179 (338)
T KOG3946|consen 129 KIFPGGMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGE 179 (338)
T ss_pred ccCCCcceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccH
Confidence 4211 111233445555566543211 112 23677888973
No 80
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=25.22 E-value=1.2e+03 Score=27.89 Aligned_cols=33 Identities=9% Similarity=0.242 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005387 577 TISSFFIGLGLMSVINFATAEIGALLMVPMALM 609 (699)
Q Consensus 577 ~Ll~~~~~l~~la~lNFsLa~~~al~~vPl~l~ 609 (699)
.+..+++.++++++.|.=-+++.++++.++.++
T Consensus 104 ~~~~lAl~~all~lsHll~~ll~~l~~~~~lLi 136 (616)
T PF10131_consen 104 YWILLALSMALLALSHLLSTLLTGLALIVFLLI 136 (616)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 344555566667777755555666666555543
No 81
>PF01277 Oleosin: Oleosin; InterPro: IPR000136 Oleosins [] are the proteinaceous components of plants' lipid storage bodies called oil bodies. Oil bodies are small droplets (0.2 to 1.5 mu-m in diameter) containing mostly triacylglycerol that are surrounded by a phospholipid/ oleosin annulus. Oleosins may have a structural role in stabilising the lipid body during dessication of the seed, by preventing coalescence of the oil. They may also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth. Oleosins are found in the monolayer lipid/ water interface of oil bodies and probably interact with both the lipid and phospholipid moieties. Oleosins are proteins of 16 Kd to 24 Kd and are composed of three domains: an N-terminal hydrophilic region of variable length (from 30 to 60 residues); a central hydrophobic domain of about 70 residues and a C-terminal amphipathic region of variable length (from 60 to 100 residues). The central hydrophobic domain is proposed to be made up of beta-strand structure and to interact with the lipids []. It is the only domain whose sequence is conserved.; GO: 0012511 monolayer-surrounded lipid storage body, 0016021 integral to membrane
Probab=22.57 E-value=6.5e+02 Score=23.92 Aligned_cols=42 Identities=19% Similarity=0.217 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 005387 571 ATLKSATISSFFIGLGLMSVINFATAEIGALLMVPMALMAHP 612 (699)
Q Consensus 571 ~~lk~~~Ll~~~~~l~~la~lNFsLa~~~al~~vPl~l~~~p 612 (699)
+.++.+.++..+..|.+++-+-+.=+.+.-++..|+.++..|
T Consensus 4 qvl~~~~~~~~gg~LL~LaGlTL~gtvigL~vatPLfvifSP 45 (118)
T PF01277_consen 4 QVLAVVTLLPAGGTLLVLAGLTLAGTVIGLAVATPLFVIFSP 45 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Confidence 578888888888888888877777555555566898877666
No 82
>PRK09961 exoaminopeptidase; Provisional
Probab=22.44 E-value=7.4e+02 Score=27.36 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=62.3
Q ss_pred chhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHhcCCCCCCCcccccccccCCCCCccccccccccc
Q 005387 179 ETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRR 258 (699)
Q Consensus 179 ~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aYH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 258 (699)
+-.|++.++.+++.++..+ ...|++|+++++++-+..|.+.--... .|.
T Consensus 167 nR~g~~~lle~l~~l~~~~-~~~~v~~~~tvqEEvG~rGa~~aa~~i-~pd----------------------------- 215 (344)
T PRK09961 167 DRLGCYLLVTLLRELHDAE-LPAEVWLVASSSEEVGLRGGQTATRAV-SPD----------------------------- 215 (344)
T ss_pred hhHhHHHHHHHHHHhhhcC-CCceEEEEEEcccccchHHHHHHHhcc-CCC-----------------------------
Confidence 4568999998888887555 489999999998665566666542221 111
Q ss_pred ccceeeeeEEeecCCCCCcc-----------eEEEEeecCCCCCCchhHHHHHHHHHhhccCceeeEe
Q 005387 259 SGTMAAALVLGVAYGNENED-----------TLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVE 315 (699)
Q Consensus 259 aG~IqaAl~le~~~~~~~~~-----------~l~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~~~l~ 315 (699)
.||++|.....+..+ -.-|..- -.|-.+|-.++..+.++|. +.|++..+.
T Consensus 216 -----~~I~vDv~~~~d~~~~~~~~~~~lg~Gp~i~~~-D~~~i~~~~l~~~l~~~A~-~~~Ip~Q~~ 276 (344)
T PRK09961 216 -----VAIVLDTACWAKNFDYGAANHRQIGNGPMLVLS-DKSLIAPPKLTAWIETVAA-EIGIPLQAD 276 (344)
T ss_pred -----EEEEEeccCCCCCCCCCCCcccccCCCceEEEc-cCCcCCCHHHHHHHHHHHH-HcCCCcEEE
Confidence 245555442211111 1112111 2388999999999999996 677777653
Done!