Query 005387
Match_columns 699
No_of_seqs 185 out of 241
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 23:54:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f9u_A CG32412; alpha/beta hyd 99.0 8.8E-09 3E-13 108.7 18.7 114 93-228 32-167 (312)
2 3tc8_A Leucine aminopeptidase; 98.8 2.2E-08 7.4E-13 106.1 13.6 134 71-227 24-188 (309)
3 3gux_A Putative Zn-dependent e 98.8 5.9E-08 2E-12 103.1 14.4 137 64-226 22-190 (314)
4 4fuu_A Leucine aminopeptidase; 98.7 3.2E-07 1.1E-11 96.8 16.4 138 64-227 20-189 (309)
5 4fai_A CG5976, isoform B; alph 98.7 9.1E-08 3.1E-12 102.1 12.2 113 93-227 59-190 (330)
6 1tkj_A Aminopeptidase, SGAP; d 98.7 1.6E-06 5.5E-11 90.2 21.0 127 74-226 9-146 (284)
7 1rtq_A Bacterial leucyl aminop 98.5 2.8E-06 9.7E-11 88.9 18.9 130 73-227 21-167 (299)
8 3pb6_X Glutaminyl-peptide cycl 98.0 2.3E-05 7.7E-10 83.9 11.3 111 94-227 62-197 (330)
9 2afw_A Glutaminyl-peptide cycl 97.9 2.1E-05 7.1E-10 83.7 9.4 111 94-227 54-193 (329)
10 3iib_A Peptidase M28; YP_92679 97.6 0.00082 2.8E-08 74.4 16.7 82 144-226 233-318 (444)
11 4h2k_A Succinyl-diaminopimelat 97.3 0.01 3.4E-07 60.9 19.1 120 73-225 7-152 (269)
12 3t68_A Succinyl-diaminopimelat 96.9 0.023 8E-07 58.0 16.5 119 74-225 8-152 (268)
13 3n5f_A L-carbamoylase, N-carba 96.6 0.017 5.8E-07 62.4 13.5 118 74-223 7-141 (408)
14 2ek8_A Aminopeptidase; metallo 96.6 0.0071 2.4E-07 66.2 10.2 82 144-226 201-287 (421)
15 1q7l_A Aminoacylase-1; catalys 96.5 0.023 8E-07 55.4 12.6 123 74-224 12-161 (198)
16 3ct9_A Acetylornithine deacety 96.2 0.039 1.3E-06 58.5 13.1 117 74-225 13-152 (356)
17 1ysj_A Protein YXEP; M20 famil 96.1 0.063 2.1E-06 58.0 14.6 120 72-224 32-169 (404)
18 3pfo_A Putative acetylornithin 96.1 0.068 2.3E-06 57.9 14.9 138 75-224 29-191 (433)
19 1cg2_A Carboxypeptidase G2; me 96.1 0.046 1.6E-06 58.6 13.3 104 94-225 43-167 (393)
20 2pok_A Peptidase, M20/M25/M40 96.0 0.058 2E-06 59.6 14.1 123 74-225 46-195 (481)
21 3gb0_A Peptidase T; NP_980509. 95.9 0.056 1.9E-06 57.3 12.9 125 73-222 7-152 (373)
22 3k9t_A Putative peptidase; str 95.9 0.03 1E-06 61.4 10.8 76 144-225 163-238 (435)
23 1y0y_A FRV operon protein FRVX 95.8 1.5 5.1E-05 46.3 23.1 43 178-223 182-224 (353)
24 3rza_A Tripeptidase; phosphory 95.7 0.086 2.9E-06 56.6 13.2 128 72-223 24-174 (396)
25 2wyr_A Cobalt-activated peptid 95.5 1 3.5E-05 47.0 20.4 43 179-222 174-216 (332)
26 1z2l_A Allantoate amidohydrola 95.4 0.097 3.3E-06 56.5 12.6 119 73-223 10-145 (423)
27 3tx8_A Succinyl-diaminopimelat 95.3 0.17 5.7E-06 53.5 13.7 118 74-225 15-152 (369)
28 2zog_A Cytosolic non-specific 95.2 0.21 7.1E-06 54.9 14.6 134 74-226 22-185 (479)
29 3kas_A Transferrin receptor pr 95.2 0.029 1E-06 64.9 7.9 83 144-227 264-352 (640)
30 1xmb_A IAA-amino acid hydrolas 95.2 0.22 7.5E-06 53.9 14.4 117 74-225 30-164 (418)
31 3fed_A Glutamate carboxypeptid 95.1 0.044 1.5E-06 64.1 9.1 83 144-227 310-397 (707)
32 1vgy_A Succinyl-diaminopimelat 95.0 0.26 8.7E-06 52.7 14.1 119 74-225 8-152 (393)
33 1vhe_A Aminopeptidase/glucanas 94.8 0.23 8E-06 53.1 13.1 44 179-223 185-228 (373)
34 3dlj_A Beta-Ala-His dipeptidas 94.7 0.33 1.1E-05 53.6 14.2 114 94-226 54-192 (485)
35 3ife_A Peptidase T; metallopep 94.7 0.097 3.3E-06 57.0 9.8 130 60-221 14-209 (434)
36 2rb7_A Peptidase, M20/M25/M40 94.6 0.068 2.3E-06 56.8 8.2 121 73-225 7-154 (364)
37 3isz_A Succinyl-diaminopimelat 94.6 0.41 1.4E-05 50.3 14.2 119 74-225 5-149 (377)
38 3mru_A Aminoacyl-histidine dip 94.4 0.23 7.9E-06 55.2 12.3 118 71-223 13-161 (490)
39 2v8h_A Beta-alanine synthase; 94.3 0.16 5.5E-06 56.1 10.8 97 94-223 71-175 (474)
40 1ylo_A Hypothetical protein SF 94.1 2.2 7.4E-05 44.6 18.5 44 180-224 171-214 (348)
41 3ram_A HMRA protein; two-domai 93.7 0.46 1.6E-05 51.1 12.6 120 73-224 17-143 (394)
42 3khx_A Putative dipeptidase sa 93.6 0.32 1.1E-05 54.0 11.4 100 94-228 67-189 (492)
43 1lfw_A PEPV; hydrolase, dipept 93.3 0.77 2.6E-05 50.2 13.6 99 94-227 47-169 (470)
44 2qyv_A XAA-His dipeptidase; YP 93.1 0.34 1.1E-05 53.5 10.5 118 73-225 12-160 (487)
45 3pfe_A Succinyl-diaminopimelat 93.1 0.61 2.1E-05 51.3 12.5 102 94-225 49-177 (472)
46 1vho_A Endoglucanase; structur 92.9 2.3 7.8E-05 44.6 16.1 39 180-219 174-212 (346)
47 1fno_A Peptidase T; metallo pe 92.8 0.25 8.5E-06 53.3 8.7 97 94-222 33-183 (417)
48 3io1_A Aminobenzoyl-glutamate 92.5 1.4 4.8E-05 48.1 14.4 145 72-224 14-196 (445)
49 2gre_A Deblocking aminopeptida 91.0 0.53 1.8E-05 49.7 8.6 35 177-211 185-220 (349)
50 2fvg_A Endoglucanase; TM1049, 90.7 0.51 1.7E-05 49.6 8.1 44 179-225 168-211 (340)
51 3cpx_A Aminopeptidase, M42 fam 89.1 4.2 0.00014 42.4 13.6 37 75-112 20-56 (321)
52 2f7v_A Aectylcitrulline deacet 88.4 1.9 6.4E-05 45.6 10.4 113 73-226 10-149 (369)
53 2wzn_A TET3, 354AA long hypoth 76.1 5.2 0.00018 39.8 7.4 62 76-172 13-74 (354)
54 3kl9_A PEPA, glutamyl aminopep 42.7 50 0.0017 35.0 7.7 67 74-173 5-71 (355)
55 3isx_A Endoglucanase; TM1050, 33.9 67 0.0023 33.9 6.9 64 74-173 13-76 (343)
56 2vpu_A TET3, 354AA long hypoth 33.6 67 0.0023 34.0 6.9 63 75-173 12-75 (354)
57 2ek8_A Aminopeptidase; metallo 23.4 51 0.0017 35.4 3.8 45 73-117 17-62 (421)
No 1
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.01 E-value=8.8e-09 Score=108.68 Aligned_cols=114 Identities=13% Similarity=0.156 Sum_probs=89.2
Q ss_pred cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 93 ~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
...++||.++|+++|++++.|+|+.+.. . .....++||+|.++. ...|.|||.++||+
T Consensus 32 ~~~~~~i~~~l~~~g~~v~~~~f~~~~~-----------------~--~~~~~~~Nii~~~~~---~~~~~vvl~aHyDs 89 (312)
T 4f9u_A 32 QQVREYLVQSLNGLGFQTEVDEFKQRVP-----------------V--FGELTFANVVGTINP---QAQNFLALACHYDS 89 (312)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEEEET-----------------T--TEEEEEEEEEEEEST---TSSEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCeEEEEeEEEecC-----------------C--CCceeEEEEEEEECC---CCCceEEEEEEEec
Confidence 3578999999999999999999975410 0 013578999999975 45699999999998
Q ss_pred CC--------CCccchhhHHHHHHHHHHHhcC------CccccceEEEeeCCCCCC--------chhHHHHHHHhcCC
Q 005387 173 VK--------GGVRETLSLGIAYSVFSLLTRV------TWLAKDIIWLVADSQYGE--------YAPVAAWLRDYHTP 228 (699)
Q Consensus 173 ~~--------~~~~~~~sval~LaLa~yl~r~------~~wAKDIIfl~~D~~~g~--------~~G~~AWL~aYH~~ 228 (699)
.. +..+++.|+|.+|-+||.|+.. .--.++|+|++.|+++.+ ..|.++|.+.|...
T Consensus 90 ~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a~~~~~~ 167 (312)
T 4f9u_A 90 KYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLAAKLASK 167 (312)
T ss_dssp CCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHHHHHHHHhh
Confidence 42 4456688999999999998631 224689999999986533 78999999998653
No 2
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=98.83 E-value=2.2e-08 Score=106.15 Aligned_cols=134 Identities=11% Similarity=0.145 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHhhhcCCCCC--ccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccce
Q 005387 71 VSEANKLIKELNNLHSNPLGA--TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGIN 148 (699)
Q Consensus 71 ~~~a~~y~~el~~~~~~~~~~--~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~N 148 (699)
...+.++.+++.+...+..++ ....++||.++|+++|+++..|.|+.+. ..+ ....+.|
T Consensus 24 ~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~------------------~~g-~~~~~~N 84 (309)
T 3tc8_A 24 ADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTA------------------YDG-TKLEARN 84 (309)
T ss_dssp HHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEC------------------TTS-CEEEEEE
T ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccc------------------cCC-CcccceE
Confidence 345677777776654443222 2357899999999999999999886430 000 1246789
Q ss_pred EEEEEcCCCCCCceeEEEEEeeccCC----------------CCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCC
Q 005387 149 TVGIIRAPRGDGKEAIVLVTPYNAVK----------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQY 212 (699)
Q Consensus 149 vygIlrAPRgdgtEaiVL~ap~~~~~----------------~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~ 212 (699)
|+|.++. ...|.|||.++||+.. +..+++.|++.+|.++|.+++.. ..++|+|+++++++
T Consensus 85 via~~~g---~~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~~-~~~~i~f~~~~~EE 160 (309)
T 3tc8_A 85 IIGSFDP---ENSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQKA-PGIGIDIIFFDAED 160 (309)
T ss_dssp EEEEEST---TCSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHSC-CSSEEEEEEECSCS
T ss_pred EEEEECC---CCCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhCC-CCCcEEEEEECccc
Confidence 9999986 3468999999998853 33355679999999999998776 68999999998766
Q ss_pred CCc-------------hhHHHHHHHhcC
Q 005387 213 GEY-------------APVAAWLRDYHT 227 (699)
Q Consensus 213 g~~-------------~G~~AWL~aYH~ 227 (699)
.+. .|.++|.+.++.
T Consensus 161 ~Gl~~~~~~~~~ds~~~GS~~~~~~~~~ 188 (309)
T 3tc8_A 161 YGTPEFVTDYTPDSWCLGTQFWAKNPHV 188 (309)
T ss_dssp CSCCTTCCSCCTTCSCHHHHHHHHSCSS
T ss_pred cccccccccccccccchhHHHHHhCCCc
Confidence 555 899999885543
No 3
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=98.77 E-value=5.9e-08 Score=103.11 Aligned_cols=137 Identities=18% Similarity=0.197 Sum_probs=96.0
Q ss_pred eeccchhHHHHHHHHHHHHhhhcCCCC--CccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCc
Q 005387 64 SMLSNQEVSEANKLIKELNNLHSNPLG--ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENST 141 (699)
Q Consensus 64 ~~f~~~~~~~a~~y~~el~~~~~~~~~--~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~ 141 (699)
+.|+.+ .+.++.++|.+...+..+ +....++||.++|+++|+++..|.|..+. + . +
T Consensus 22 ~~~~~~---~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~--------------~---~-g- 79 (314)
T 3gux_A 22 PEFDAD---SAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIA--------------Y---D-G- 79 (314)
T ss_dssp CCCCHH---HHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEC--------------T---T-S-
T ss_pred CCCCHH---HHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccc--------------c---C-C-
Confidence 555543 466777777665544322 22357899999999999999999886420 0 0 0
Q ss_pred cccccceEEEEEcCCCCCCceeEEEEEeeccCC----------------CCccchhhHHHHHHHHHHHhcCCccccceEE
Q 005387 142 RSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVK----------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIW 205 (699)
Q Consensus 142 ~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~----------------~~~~~~~sval~LaLa~yl~r~~~wAKDIIf 205 (699)
....+.||+|.++. ...|.|||.++||+.. +..+++.|++.+|.++|.+++.. ..++|+|
T Consensus 80 ~~~~~~Nvia~~~g---~~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~~-~~~~i~f 155 (314)
T 3gux_A 80 TILKSRNIIGAYKP---ESKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKEQ-PALGIDI 155 (314)
T ss_dssp CEEEEEEEEEEEST---TCSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHSC-CSSEEEE
T ss_pred CcccceEEEEEECC---CCCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhCC-CCCcEEE
Confidence 12457899999985 3468999999998863 33345789999999999998776 6899999
Q ss_pred EeeCCCCCCc--------------hhHHHHHHHhc
Q 005387 206 LVADSQYGEY--------------APVAAWLRDYH 226 (699)
Q Consensus 206 l~~D~~~g~~--------------~G~~AWL~aYH 226 (699)
++.++++.+. .|.++|.+.++
T Consensus 156 v~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~ 190 (314)
T 3gux_A 156 VFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPH 190 (314)
T ss_dssp EEECSCCC-----------CTTSCHHHHHHHHSCS
T ss_pred EEECCccccccccccccccccccchhHHHHHhCCc
Confidence 9998755434 77788876544
No 4
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=3.2e-07 Score=96.85 Aligned_cols=138 Identities=15% Similarity=0.182 Sum_probs=101.2
Q ss_pred eeccchhHHHHHHHHHHHHhhhcCCCCC--ccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCc
Q 005387 64 SMLSNQEVSEANKLIKELNNLHSNPLGA--TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENST 141 (699)
Q Consensus 64 ~~f~~~~~~~a~~y~~el~~~~~~~~~~--~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~ 141 (699)
+.|+.+ .|.+|.+++...-.+..++ ....++||.++|+++|+++..|.|+... ..+
T Consensus 20 p~f~~~---~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~------------------~~~- 77 (309)
T 4fuu_A 20 PQFDAD---SAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIA------------------YDG- 77 (309)
T ss_dssp CCCCHH---HHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEC------------------TTS-
T ss_pred CccCHH---HHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEecc------------------CCC-
Confidence 456543 5778888777654443332 2356899999999999999999986431 000
Q ss_pred cccccceEEEEEcCCCCCCceeEEEEEeeccCC----------------CCccchhhHHHHHHHHHHHhcCCccccceEE
Q 005387 142 RSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVK----------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIW 205 (699)
Q Consensus 142 ~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~----------------~~~~~~~sval~LaLa~yl~r~~~wAKDIIf 205 (699)
......||+|.+.. ...+.|||.++||+.. +..+++.|+|.+|-+||.|++... .++|+|
T Consensus 78 ~~~~~~Nii~~~~g---~~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~~~-~~~i~~ 153 (309)
T 4fuu_A 78 TLLKARNIIGSYKP---ESKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQQP-ELGIDI 153 (309)
T ss_dssp CEEEEEEEEEEEST---TCSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHSCC-SSEEEE
T ss_pred CcceeEEEEEEECC---CCCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhcCC-CCceEE
Confidence 13578999999975 3468999999999742 334567899999999999998764 899999
Q ss_pred EeeCCCCCC--------------chhHHHHHHHhcC
Q 005387 206 LVADSQYGE--------------YAPVAAWLRDYHT 227 (699)
Q Consensus 206 l~~D~~~g~--------------~~G~~AWL~aYH~ 227 (699)
++.|+++.. ..|.++|.+.++.
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~ 189 (309)
T 4fuu_A 154 IFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHV 189 (309)
T ss_dssp EEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSS
T ss_pred EeecccccCccccccchhhhhhhhcchhHHHhcccc
Confidence 999886533 3688888886654
No 5
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=98.67 E-value=9.1e-08 Score=102.14 Aligned_cols=113 Identities=14% Similarity=0.204 Sum_probs=87.9
Q ss_pred cchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 93 ~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
...++||.++|+++|.++..|+|+.+. | .. ....++||+|.+.. +..|.|||.++||+
T Consensus 59 ~~~~~~i~~~l~~~g~~v~~q~f~~~~----~-------------~~--~~~~~~Nii~~~~~---~~~~~i~l~aHyDs 116 (330)
T 4fai_A 59 SIVREYIVQSLRDLDWDVEVNSFHDHA----P-------------IK--GKLHFHNIIATLNP---NAERYLVLSCHYDS 116 (330)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEEEE----T-------------TT--EEEEEEEEEEESCT---TCSEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCEEEEeeeeeec----C-------------CC--CceeEEEEEEEECC---CCCcEEEEEEeecc
Confidence 357999999999999999999987531 0 00 13578999998753 56789999999998
Q ss_pred CC-------CCccchhhHHHHHHHHHHHhcC----CccccceEEEeeCCCCCC--------chhHHHHHHHhcC
Q 005387 173 VK-------GGVRETLSLGIAYSVFSLLTRV----TWLAKDIIWLVADSQYGE--------YAPVAAWLRDYHT 227 (699)
Q Consensus 173 ~~-------~~~~~~~sval~LaLa~yl~r~----~~wAKDIIfl~~D~~~g~--------~~G~~AWL~aYH~ 227 (699)
.. +..+++.|+|.+|.+||.|++. .--.++|+|++.|+++.+ ..|.++|.+.++.
T Consensus 117 ~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~~a~~~~~ 190 (330)
T 4fai_A 117 KYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKKWHH 190 (330)
T ss_dssp CCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHHHHHHHHH
T ss_pred cccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHHHHhcchh
Confidence 52 4456688999999999998642 123689999999986543 3799999999875
No 6
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=98.66 E-value=1.6e-06 Score=90.25 Aligned_cols=127 Identities=10% Similarity=0.099 Sum_probs=93.6
Q ss_pred HHHHHHHHHhhhcCCCC-------CccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCcccccc
Q 005387 74 ANKLIKELNNLHSNPLG-------ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYG 146 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~-------~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G 146 (699)
+.++.++|-+....+.. ...+.++||.++|+++|+++..+.+... ...+
T Consensus 9 ~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~------------------------~~~~ 64 (284)
T 1tkj_A 9 VKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSG------------------------GATG 64 (284)
T ss_dssp HHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEET------------------------TEEE
T ss_pred HHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccC------------------------CCCc
Confidence 45566666665443321 1235789999999999999988765321 1357
Q ss_pred ceEEEEEcCCCCCCceeEEEEEeeccCC---CCccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCCCchhHHHHH
Q 005387 147 INTVGIIRAPRGDGKEAIVLVTPYNAVK---GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVAAWL 222 (699)
Q Consensus 147 ~NvygIlrAPRgdgtEaiVL~ap~~~~~---~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g~~~G~~AWL 222 (699)
.||+|.++.. ++.+.|+|.+++|... +..++..+++.+|.+++.+++..+ ..++|+|+++++++....|.++|+
T Consensus 65 ~nvi~~~~g~--~~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~ 142 (284)
T 1tkj_A 65 YNLIANWPGG--DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYV 142 (284)
T ss_dssp EEEEEECSCS--EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHH
T ss_pred eeEEEEEeCC--CCCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHH
Confidence 8999998752 2447899999999754 334556799999999999987654 579999999887665678999999
Q ss_pred HHhc
Q 005387 223 RDYH 226 (699)
Q Consensus 223 ~aYH 226 (699)
+++.
T Consensus 143 ~~~~ 146 (284)
T 1tkj_A 143 NNLP 146 (284)
T ss_dssp HHSC
T ss_pred hhCc
Confidence 8754
No 7
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=98.53 E-value=2.8e-06 Score=88.92 Aligned_cols=130 Identities=12% Similarity=0.139 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhhhcCCCC--CccchHHHHHHHHHHcCC--c-eeeeccccCCccCCCcccccCCCCCccccCCccccccc
Q 005387 73 EANKLIKELNNLHSNPLG--ATTESHGIIAKYMSNLGA--Q-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~--~~~~~~~~l~~~l~~lGl--e-~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~ 147 (699)
.+.++.++|-+...+... ...+.++||.++|+++|. + +..+.+... ...+.
T Consensus 21 ~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~------------------------~~~~~ 76 (299)
T 1rtq_A 21 QITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHS------------------------GYNQK 76 (299)
T ss_dssp HHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEET------------------------TEEEE
T ss_pred HHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccC------------------------CCCCc
Confidence 455566666655432211 123578999999999874 3 333332110 12468
Q ss_pred eEEEEEcCCCCCCceeEEEEEeeccC-----------CCCccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCCCc
Q 005387 148 NTVGIIRAPRGDGKEAIVLVTPYNAV-----------KGGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEY 215 (699)
Q Consensus 148 NvygIlrAPRgdgtEaiVL~ap~~~~-----------~~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g~~ 215 (699)
||+|.++.. +.+.+.+++.+++|.. .+..++..|++.++.+++.+++..+ ..++|+|+++++++.+.
T Consensus 77 nvi~~~~g~-~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~ 155 (299)
T 1rtq_A 77 SVVMTITGS-EAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGL 155 (299)
T ss_dssp EEEEEECCS-SEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS
T ss_pred eEEEEEECC-CCCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCc
Confidence 999999742 2235789999999984 2444567899999999999987654 57899999998776667
Q ss_pred hhHHHHHHHhcC
Q 005387 216 APVAAWLRDYHT 227 (699)
Q Consensus 216 ~G~~AWL~aYH~ 227 (699)
.|.++|++++..
T Consensus 156 ~Gs~~~~~~~~~ 167 (299)
T 1rtq_A 156 RGSQDLANQYKS 167 (299)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhHHHHHHhhhh
Confidence 899999987753
No 8
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=98.00 E-value=2.3e-05 Score=83.85 Aligned_cols=111 Identities=11% Similarity=0.107 Sum_probs=87.1
Q ss_pred chHHHHHHHHHHc--CCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeec
Q 005387 94 ESHGIIAKYMSNL--GAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYN 171 (699)
Q Consensus 94 ~~~~~l~~~l~~l--Gle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~ 171 (699)
..++||.++|+++ |+++..|+|+.+ ++. + .....||+|.++.. ..+.|||.++||
T Consensus 62 ~a~~~l~~~l~~~~~g~~v~~d~f~~~---------------~~~---g--~~~~~Nvia~~~g~---~~~~ivl~aH~D 118 (330)
T 3pb6_X 62 QVRKFLEATLRSLTAGWHVELDPFTAS---------------TPL---G--PVDFGNVVATLDPR---AARHLTLACHYD 118 (330)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEEEEEEE---------------ETT---E--EEEEEEEEEESCTT---SSEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCCCCeEEEEeeecc---------------ccc---C--CccceEEEEEECCC---CCceEEEEeccC
Confidence 4689999999999 899999998643 000 0 34678999999743 358999999999
Q ss_pred cCC---------CCccchhhHHHHHHHHHHHhcC------CccccceEEEeeCCCCC--------CchhHHHHHHHhcC
Q 005387 172 AVK---------GGVRETLSLGIAYSVFSLLTRV------TWLAKDIIWLVADSQYG--------EYAPVAAWLRDYHT 227 (699)
Q Consensus 172 ~~~---------~~~~~~~sval~LaLa~yl~r~------~~wAKDIIfl~~D~~~g--------~~~G~~AWL~aYH~ 227 (699)
+.. +..+++.|++.+|.+||.+++. .--.++|.|++.|++++ ...|.+++.+.+..
T Consensus 119 sv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~ 197 (330)
T 3pb6_X 119 SKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMES 197 (330)
T ss_dssp CCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHH
T ss_pred CCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHHHHh
Confidence 842 3345578999999999999762 33579999999999877 78999999887654
No 9
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=97.93 E-value=2.1e-05 Score=83.68 Aligned_cols=111 Identities=11% Similarity=0.104 Sum_probs=85.5
Q ss_pred chHHHHHHHHHH--cCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeec
Q 005387 94 ESHGIIAKYMSN--LGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYN 171 (699)
Q Consensus 94 ~~~~~l~~~l~~--lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~ 171 (699)
..++||.++|++ .|+++..+.|..+. | .+ ...+.||+|.+.. .+.+.|||.++||
T Consensus 54 ~~~~~l~~~l~~~~~G~~v~~~~~~~~~----~--------------~g--~~~~~Nvi~~~~g---~~~~~i~l~aH~D 110 (329)
T 2afw_A 54 AARQHIMQRIQRLQADWVLEIDTFLSQT----P--------------YG--YRSFSNIISTLNP---TAKRHLVLACHYD 110 (329)
T ss_dssp HHHHHHHHHHHTSSSCCEEEEEEEEECC----T--------------TS--SEEEEEEEEESST---TSSEEEEEEEECC
T ss_pred HHHHHHHHHHHhhCCCCEEEEEEEEecC----C--------------CC--CceEeEEEEEECC---CCCcEEEEEEecc
Confidence 568999999999 99999999886530 0 00 2367899999964 3578999999999
Q ss_pred cC----------CCCccchhhHHHHHHHHHHHhcC---------CccccceEEEeeCCCCC--------CchhHHHHHHH
Q 005387 172 AV----------KGGVRETLSLGIAYSVFSLLTRV---------TWLAKDIIWLVADSQYG--------EYAPVAAWLRD 224 (699)
Q Consensus 172 ~~----------~~~~~~~~sval~LaLa~yl~r~---------~~wAKDIIfl~~D~~~g--------~~~G~~AWL~a 224 (699)
+. .+..+++.|++.+|.++|.+++. .-..++|+|++.|+++. ...|.++|.+.
T Consensus 111 sv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~ 190 (329)
T 2afw_A 111 SKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAK 190 (329)
T ss_dssp CCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHH
T ss_pred CCCcCcccCcCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHH
Confidence 83 24445678999999999999754 12478999999988764 57899999998
Q ss_pred hcC
Q 005387 225 YHT 227 (699)
Q Consensus 225 YH~ 227 (699)
+..
T Consensus 191 ~~~ 193 (329)
T 2afw_A 191 MAS 193 (329)
T ss_dssp HHT
T ss_pred HHh
Confidence 754
No 10
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=97.65 E-value=0.00082 Score=74.37 Aligned_cols=82 Identities=6% Similarity=0.107 Sum_probs=66.8
Q ss_pred cccceEEEEEcCCCCCCceeEEEEEeeccCC---CCccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCCCchhHH
Q 005387 144 LYGINTVGIIRAPRGDGKEAIVLVTPYNAVK---GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVA 219 (699)
Q Consensus 144 ~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~---~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g~~~G~~ 219 (699)
....||+|.++... ...|.|++.+++|+.. +..++..|++.+|.++|.|++..| ..|+|.|++.++++.+..|.+
T Consensus 233 ~~~~Nvi~~~~g~~-~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~ 311 (444)
T 3iib_A 233 TTSYNVIAEVKGST-KADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGK 311 (444)
T ss_dssp EEEEEEEEEECCST-EEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHH
T ss_pred ceeEEEEEEEeCCC-CCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHH
Confidence 46789999997532 2468999999999865 444567899999999999998765 469999999988777789999
Q ss_pred HHHHHhc
Q 005387 220 AWLRDYH 226 (699)
Q Consensus 220 AWL~aYH 226 (699)
+|++.+.
T Consensus 312 ~~~~~~~ 318 (444)
T 3iib_A 312 TYAKEHE 318 (444)
T ss_dssp HHHHHTG
T ss_pred HHHHhhH
Confidence 9999774
No 11
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=97.35 E-value=0.01 Score=60.85 Aligned_cols=120 Identities=16% Similarity=0.109 Sum_probs=79.8
Q ss_pred HHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
+..++.++|-+...-+.+. ....+||.++|+++|+++..+.+ ....|+++.
T Consensus 7 ~~~~~l~~lv~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~----------------------------~~~~nv~a~ 57 (269)
T 4h2k_A 7 KVVSLAQDLIRRPSISPND-EGCQQIIAERLEKLGFQIEWMPF----------------------------NDTLNLWAK 57 (269)
T ss_dssp HHHHHHHHHHTSCCBTTCC-TTHHHHHHHHHHTTTCEEEECCB----------------------------TTBCEEEEE
T ss_pred HHHHHHHHHhCCCCCCCCc-HHHHHHHHHHHHHcCCeEEEEEc----------------------------CCceEEEEE
Confidence 3455666666665544332 35789999999999998865421 024689987
Q ss_pred EcCCCCCCceeEEEEEeeccCC------------------------CCccchhhHHHHHHHHHHHhcC-CccccceEEEe
Q 005387 153 IRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRV-TWLAKDIIWLV 207 (699)
Q Consensus 153 lrAPRgdgtEaiVL~ap~~~~~------------------------~~~~~~~sval~LaLa~yl~r~-~~wAKDIIfl~ 207 (699)
+ +.+...++|.+++|... +..++..+++.++..++.+++. .-+.++|.|++
T Consensus 58 ~----g~~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~ 133 (269)
T 4h2k_A 58 H----GTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLI 133 (269)
T ss_dssp E----CSSSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEE
T ss_pred e----CCCCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEE
Confidence 6 23456899999987532 1123346788888888887653 33578999999
Q ss_pred eCCCCCCc-hhHHHHHHHh
Q 005387 208 ADSQYGEY-APVAAWLRDY 225 (699)
Q Consensus 208 ~D~~~g~~-~G~~AWL~aY 225 (699)
+-+++... .|+++.++..
T Consensus 134 ~~~EE~g~~~Ga~~~~~~~ 152 (269)
T 4h2k_A 134 TSDEEATAKDGTIHVVETL 152 (269)
T ss_dssp ESCSSSCCTTSHHHHHHHH
T ss_pred EeccccCcccCHHHHHHHH
Confidence 75444333 4888887764
No 12
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=96.89 E-value=0.023 Score=57.97 Aligned_cols=119 Identities=15% Similarity=0.124 Sum_probs=78.6
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+...-+... ....+||.++|+++|+++..+.+ ....|+++.+
T Consensus 8 ~~~~l~~lv~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~----------------------------~~~~nv~a~~ 58 (268)
T 3t68_A 8 VLALAKELISRQSVTPAD-AGCQDLMIERLKALGFEIESMVF----------------------------EDTTNFWARR 58 (268)
T ss_dssp HHHHHHHHHTSCCBTTCC-TTHHHHHHHHHHHTTCEECCCEE----------------------------TTEEC-CEEE
T ss_pred HHHHHHHHhCCCCCCCCc-hHHHHHHHHHHHHCCCeEEEEec----------------------------CCccEEEEEe
Confidence 455666776665544332 35789999999999998764321 0235888876
Q ss_pred cCCCCCCceeEEEEEeeccCC------------------------CCccchhhHHHHHHHHHHHhcC-CccccceEEEee
Q 005387 154 RAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVA 208 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~------------------------~~~~~~~sval~LaLa~yl~r~-~~wAKDIIfl~~ 208 (699)
+.+...++|.+++|... +..++..+++.++..++.+++. .-+.++|.|+++
T Consensus 59 ----g~~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~ 134 (268)
T 3t68_A 59 ----GTQSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLIT 134 (268)
T ss_dssp ----CSSSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEE
T ss_pred ----CCCCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEE
Confidence 23456899999997532 1223346888888888887643 335789999997
Q ss_pred CCCCCCc-hhHHHHHHHh
Q 005387 209 DSQYGEY-APVAAWLRDY 225 (699)
Q Consensus 209 D~~~g~~-~G~~AWL~aY 225 (699)
-+++... .|.++.++..
T Consensus 135 ~~EE~g~~~Ga~~~~~~~ 152 (268)
T 3t68_A 135 SDEEGPFINGTVRVVETL 152 (268)
T ss_dssp SCTTSSSCCHHHHHHHHH
T ss_pred eCCccCcccCHHHHHHHH
Confidence 5444333 4888888764
No 13
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=96.60 E-value=0.017 Score=62.40 Aligned_cols=118 Identities=15% Similarity=0.176 Sum_probs=82.1
Q ss_pred HHHHHHHHHhhhcCC---------CCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCcccc
Q 005387 74 ANKLIKELNNLHSNP---------LGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSL 144 (699)
Q Consensus 74 a~~y~~el~~~~~~~---------~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~ 144 (699)
..++.++|-+....+ +....+.++||.++|+++|+++.+. .
T Consensus 7 ~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d------------------------------~ 56 (408)
T 3n5f_A 7 LWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYED------------------------------A 56 (408)
T ss_dssp HHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEEC------------------------------T
T ss_pred HHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEc------------------------------C
Confidence 445556666555422 1122356899999999999987631 1
Q ss_pred ccceEEEEEcCCCCCCceeEEEEEeeccCC--CCccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCC-----Cch
Q 005387 145 YGINTVGIIRAPRGDGKEAIVLVTPYNAVK--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYA 216 (699)
Q Consensus 145 ~G~NvygIlrAPRgdgtEaiVL~ap~~~~~--~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g-----~~~ 216 (699)
.| |++|.++... .+...++|.+.+|... +..+...|++.++.+++.+++... +.++|.|+++.++++ ...
T Consensus 57 ~g-nv~a~~~g~~-~~~~~i~l~aH~D~v~~~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~ 134 (408)
T 3n5f_A 57 AG-NLIGRKEGTN-PDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMI 134 (408)
T ss_dssp TC-CEEEEECCSS-TTSCEEEEEEESCCCTTBCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCH
T ss_pred CC-CEEEEecCCC-CCCCEEEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCc
Confidence 24 9999997532 2356899999998743 333446789999999999987653 689999999755432 346
Q ss_pred hHHHHHH
Q 005387 217 PVAAWLR 223 (699)
Q Consensus 217 G~~AWL~ 223 (699)
|.++++.
T Consensus 135 Gs~~~~~ 141 (408)
T 3n5f_A 135 GSRAMAG 141 (408)
T ss_dssp HHHHHHT
T ss_pred CHHHHHc
Confidence 8888874
No 14
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.56 E-value=0.0071 Score=66.16 Aligned_cols=82 Identities=6% Similarity=0.190 Sum_probs=66.0
Q ss_pred cccceEEEEEcCCC--CCCceeEEEEEeeccCC---CCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhH
Q 005387 144 LYGINTVGIIRAPR--GDGKEAIVLVTPYNAVK---GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPV 218 (699)
Q Consensus 144 ~~G~NvygIlrAPR--gdgtEaiVL~ap~~~~~---~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~ 218 (699)
....||+|.++... ++..|.+++.+++|+.. +..++..|++.+|.++|.|++... .++|+|++.++++.+..|.
T Consensus 201 ~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~~~~-~~~i~~~~~~~EE~g~~Gs 279 (421)
T 2ek8_A 201 LTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKLKT-DTELRFITFGAEENGLIGS 279 (421)
T ss_dssp EEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTTSCC-SSEEEEEEESSSTTTSHHH
T ss_pred ccccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhccCC-CceEEEEEECCccccchhH
Confidence 45789999998743 34679999999999864 334567899999999999987653 7899999998877778999
Q ss_pred HHHHHHhc
Q 005387 219 AAWLRDYH 226 (699)
Q Consensus 219 ~AWL~aYH 226 (699)
++|+++++
T Consensus 280 ~~~~~~~~ 287 (421)
T 2ek8_A 280 KKYAASLS 287 (421)
T ss_dssp HHHHTTCC
T ss_pred HHHHHhCc
Confidence 99987543
No 15
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=96.51 E-value=0.023 Score=55.44 Aligned_cols=123 Identities=10% Similarity=0.013 Sum_probs=81.6
Q ss_pred HHHHHHHHHhhhcCCCC-CccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 74 ANKLIKELNNLHSNPLG-ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~-~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
..++.++|-+....+.+ ...+..+||.++|+++|+++.++.+. ..+.|+++.
T Consensus 12 ~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~---------------------------~g~~~~i~~ 64 (198)
T 1q7l_A 12 SVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVA---------------------------PGYVVTVLT 64 (198)
T ss_dssp HHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEE---------------------------TTEEEEEEE
T ss_pred HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcC---------------------------CCCeEEEEE
Confidence 44556666666544431 23357899999999999988755321 124689998
Q ss_pred EcCCCCCCceeEEEEEeeccCCC-----------------C-------ccchhhHHHHHHHHHHHhcCCc-cccceEEEe
Q 005387 153 IRAPRGDGKEAIVLVTPYNAVKG-----------------G-------VRETLSLGIAYSVFSLLTRVTW-LAKDIIWLV 207 (699)
Q Consensus 153 lrAPRgdgtEaiVL~ap~~~~~~-----------------~-------~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~ 207 (699)
++.. +++...++|.+++|.... + .++..+++.++..++.+++... ..++|.|++
T Consensus 65 ~~g~-~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~ 143 (198)
T 1q7l_A 65 WPGT-NPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTF 143 (198)
T ss_dssp ECCS-STTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEE
T ss_pred EccC-CCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 8643 223468999999875321 0 2223689999999999987654 578999999
Q ss_pred eCCCC-CCchhHHHHHHH
Q 005387 208 ADSQY-GEYAPVAAWLRD 224 (699)
Q Consensus 208 ~D~~~-g~~~G~~AWL~a 224 (699)
+-+++ |...|+++.+++
T Consensus 144 ~~~EE~g~~~Ga~~~~~~ 161 (198)
T 1q7l_A 144 VPDEEVGGHQGMELFVQR 161 (198)
T ss_dssp ESCGGGTSTTTHHHHTTS
T ss_pred EcccccCccccHHHHHHh
Confidence 75543 335788877653
No 16
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.17 E-value=0.039 Score=58.51 Aligned_cols=117 Identities=21% Similarity=0.190 Sum_probs=81.2
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+...-+.+ ..+..+||.++|+++|+++.. . +.|+++.+
T Consensus 13 ~~~~~~~l~~~ps~s~~-e~~~~~~l~~~l~~~g~~~~~------------------------------~--~~nv~a~~ 59 (356)
T 3ct9_A 13 AVSLLKSLISIPSISRE-ETQAADFLQNYIEAEGMQTGR------------------------------K--GNNVWCLS 59 (356)
T ss_dssp HHHHHHHHHTSCCBTTC-CHHHHHHHHHHHHHTTCCEEE------------------------------E--TTEEEEEC
T ss_pred HHHHHHHHhcCCCCCCC-hHHHHHHHHHHHHHCCCeEEE------------------------------E--eeeEEEEE
Confidence 44555666655544333 235789999999999987642 1 56888988
Q ss_pred cCCCCCCceeEEEEEeeccCCC----------------------CccchhhHHHHHHHHHHHhcCCccccceEEEeeCCC
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKG----------------------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQ 211 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~----------------------~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~ 211 (699)
+.. ..+...+++.+.+|.... ..++..+++.++..++.+++.. +.++|.|+|+-++
T Consensus 60 ~g~-~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~-~~~~v~~~~~~~E 137 (356)
T 3ct9_A 60 PMF-DLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS-QNYNLIYLASCEE 137 (356)
T ss_dssp SSC-CTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC-CSSEEEEEEECCG
T ss_pred ecC-CCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC-CCCCEEEEEEeCc
Confidence 641 123468999998875321 1133447899999999999877 8999999997555
Q ss_pred CC-CchhHHHHHHHh
Q 005387 212 YG-EYAPVAAWLRDY 225 (699)
Q Consensus 212 ~g-~~~G~~AWL~aY 225 (699)
+. ...|+++.++++
T Consensus 138 E~~g~~G~~~~~~~~ 152 (356)
T 3ct9_A 138 EVSGKEGIESVLPGL 152 (356)
T ss_dssp GGTCTTTHHHHGGGS
T ss_pred ccCCccCHHHHHhhC
Confidence 43 457899888765
No 17
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=96.13 E-value=0.063 Score=57.96 Aligned_cols=120 Identities=9% Similarity=0.075 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEE
Q 005387 72 SEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (699)
Q Consensus 72 ~~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvyg 151 (699)
.+..++.++|-+...-+.+ ..+..+||.++|+++|+++..+. ..+.|++|
T Consensus 32 ~~~i~~~~~l~~ips~s~~-e~~~~~~l~~~l~~~G~~v~~~~-----------------------------~~~~nv~a 81 (404)
T 1ysj_A 32 TRLINMRRDLHEHPELSFQ-EVETTKKIRRWLEEEQIEILDVP-----------------------------QLKTGVIA 81 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTC-CHHHHHHHHHHHHHTTCEECCCT-----------------------------TCSSCEEE
T ss_pred HHHHHHHHHHHhcCCCCCC-hHHHHHHHHHHHHHcCCceEEec-----------------------------cCCceEEE
Confidence 3455566666666554433 34678999999999999874221 12579999
Q ss_pred EEcCCCCCCceeEEEEEeeccCCCCc-----------c------chhhHHHHHHHHHHHhcC-CccccceEEEeeCCCCC
Q 005387 152 IIRAPRGDGKEAIVLVTPYNAVKGGV-----------R------ETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYG 213 (699)
Q Consensus 152 IlrAPRgdgtEaiVL~ap~~~~~~~~-----------~------~~~sval~LaLa~yl~r~-~~wAKDIIfl~~D~~~g 213 (699)
.+++.. +...+++.+.+|....+. + -..+++.++..++.+++. .-+.++|.|+++-+++.
T Consensus 82 ~~~g~~--~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~ 159 (404)
T 1ysj_A 82 EIKGRE--DGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEI 159 (404)
T ss_dssp EEECSS--CCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTT
T ss_pred EEeCCC--CCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEeccccc
Confidence 997532 336899999997642110 0 124788888899999875 34689999999755444
Q ss_pred CchhHHHHHHH
Q 005387 214 EYAPVAAWLRD 224 (699)
Q Consensus 214 ~~~G~~AWL~a 224 (699)
..|+++.+++
T Consensus 160 -~~G~~~~~~~ 169 (404)
T 1ysj_A 160 -AAGARKVLEA 169 (404)
T ss_dssp -TCHHHHHHHT
T ss_pred -chhHHHHHhc
Confidence 5799998885
No 18
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=96.12 E-value=0.068 Score=57.88 Aligned_cols=138 Identities=7% Similarity=0.009 Sum_probs=83.3
Q ss_pred HHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEc
Q 005387 75 NKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIR 154 (699)
Q Consensus 75 ~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlr 154 (699)
.++.++|-+...-+.+ .....+||.++|+++|+++..+......-.-+| -+ .+ .... ....+.|++|.++
T Consensus 29 ~~~l~~l~~~ps~s~~-e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~--~~-----~~-~~~~-~~~~~~~via~~~ 98 (433)
T 3pfo_A 29 VAFLQRMVQFRSVRGE-EAPQQEWLAQQFADRGYKVDTFSLADVDIASHP--KA-----AP-MDTI-DPAGSMQVVATAD 98 (433)
T ss_dssp HHHHHHHHTSCCBTTC-CHHHHHHHHHHHHHTTCEEEEEETGGGTGGGST--TC-----CC-CTTC-CGGGCEEEEEEEC
T ss_pred HHHHHHHhcCCCCCCC-HHHHHHHHHHHHHHCCCceEEEecchhhhhccc--cc-----cc-cccc-cCCCCcEEEEEEe
Confidence 3444455444433332 335789999999999999887653211000000 00 00 0000 0124689999998
Q ss_pred CCCCCCceeEEEEEeeccCCC------------------------CccchhhHHHHHHHHHHHhcCC-ccccceEEEeeC
Q 005387 155 APRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVAD 209 (699)
Q Consensus 155 APRgdgtEaiVL~ap~~~~~~------------------------~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D 209 (699)
. +.+...++|.+.+|.... ..+...+++.++..++.+++.. -+.++|.|+|+-
T Consensus 99 g--~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 176 (433)
T 3pfo_A 99 S--DGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARVHVQTVT 176 (433)
T ss_dssp C--CCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCEEEEEES
T ss_pred c--CCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccEEEEEEe
Confidence 6 234468999999975321 1123468888899999988654 367899999964
Q ss_pred CCCCCchhHHHHHHH
Q 005387 210 SQYGEYAPVAAWLRD 224 (699)
Q Consensus 210 ~~~g~~~G~~AWL~a 224 (699)
+++....|.++.+++
T Consensus 177 ~EE~g~~G~~~~~~~ 191 (433)
T 3pfo_A 177 EEESTGNGALSTLMR 191 (433)
T ss_dssp CTTTTCHHHHHHHHT
T ss_pred cCccCChhHHHHHhc
Confidence 443334688888875
No 19
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=96.10 E-value=0.046 Score=58.59 Aligned_cols=104 Identities=16% Similarity=0.141 Sum_probs=73.7
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
...+||.++|+++|+++..+.... ...|.|+++.+++. +...|++.+.+|..
T Consensus 43 ~~~~~l~~~l~~~G~~~~~~~~~~-------------------------~~~~~~v~a~~~g~---~~~~i~l~aH~D~v 94 (393)
T 1cg2_A 43 AAGNFLEAELKNLGFTVTRSKSAG-------------------------LVVGDNIVGKIKGR---GGKNLLLMSHMDTV 94 (393)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECST-------------------------TCCSEEEEEEEECS---SCCCEEEEEECCBS
T ss_pred HHHHHHHHHHHHcCCeEEEEecCc-------------------------CCCCCeEEEEECCC---CCceEEEEEecCcC
Confidence 468999999999999886543210 01367999999742 23789999999874
Q ss_pred CC--------------------CccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCCCchhHHHHHHHh
Q 005387 174 KG--------------------GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 174 ~~--------------------~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g~~~G~~AWL~aY 225 (699)
.. ..+...+++.+|..++.+++... +.++|.|+|+-+++....|+++.++++
T Consensus 95 p~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~~~~~ 167 (393)
T 1cg2_A 95 YLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEE 167 (393)
T ss_dssp CCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHHHHHHH
T ss_pred CCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHHHHHHH
Confidence 21 12344688888999999986543 355999999755443446888888865
No 20
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=96.05 E-value=0.058 Score=59.57 Aligned_cols=123 Identities=11% Similarity=0.158 Sum_probs=81.4
Q ss_pred HHHHHHHHHhhhcCCCCC--ccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEE
Q 005387 74 ANKLIKELNNLHSNPLGA--TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~--~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvyg 151 (699)
..++.++|-+....+... ..+..+||.++|+++|+++..+. ...+.|++|
T Consensus 46 ~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~----------------------------~~~~~~v~a 97 (481)
T 2pok_A 46 YFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDE----------------------------SYTAPFVMA 97 (481)
T ss_dssp HHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEEC----------------------------SSSSCEEEE
T ss_pred HHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEec----------------------------CCCCcEEEE
Confidence 344445555444332211 13568999999999999876432 012479999
Q ss_pred EEcCCCCCCceeEEEEEeeccCCCC------------------------ccchhhHHHHHHHHHHHhcC-CccccceEEE
Q 005387 152 IIRAPRGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIAYSVFSLLTRV-TWLAKDIIWL 206 (699)
Q Consensus 152 IlrAPRgdgtEaiVL~ap~~~~~~~------------------------~~~~~sval~LaLa~yl~r~-~~wAKDIIfl 206 (699)
.+++.. .+...++|.+.+|..... .++..+++.++..++.+++. .-+.++|.|+
T Consensus 98 ~~~g~~-~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~ 176 (481)
T 2pok_A 98 HFKSSR-PDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFI 176 (481)
T ss_dssp EECCSS-TTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEE
T ss_pred EecCCC-CCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 997521 345789999998753110 12235788889999999865 4568999999
Q ss_pred eeCCCCCCchhHHHHHHHh
Q 005387 207 VADSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 207 ~~D~~~g~~~G~~AWL~aY 225 (699)
|+-+++....|++++++++
T Consensus 177 ~~~~EE~g~~g~~~~~~~~ 195 (481)
T 2pok_A 177 MEGAEESASTDLDKYLEKH 195 (481)
T ss_dssp EESCGGGTTTTHHHHHHHH
T ss_pred EecccccCchhHHHHHHHh
Confidence 9755443446889999875
No 21
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=95.94 E-value=0.056 Score=57.34 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
...++.++|.+...-+.. ..+.++||.++|+++|+++.++..... ....+.|++|.
T Consensus 7 ~~~~~l~~l~~~ps~s~~-e~~~~~~l~~~l~~~G~~v~~~~~~~~-----------------------~~~~~~nv~a~ 62 (373)
T 3gb0_A 7 RLVNEFMELVQVDSETKF-EAEICKVLTKKFTDLGVEVFEDDTMAV-----------------------TGHGAGNLICT 62 (373)
T ss_dssp HHHHHHHHHHTSCCBTTC-CHHHHHHHHHHHHHTTCEEEECSCHHH-----------------------HCCSSCCEEEE
T ss_pred HHHHHHHHHhcccCCCcc-HHHHHHHHHHHHHHCCCEEEEeccccc-----------------------cCCCceeEEEE
Confidence 345666677666554433 346789999999999999875432100 01134799999
Q ss_pred EcCCCCCCceeEEEEEeeccCCC-----------------C----ccchhhHHHHHHHHHHHhcCCccccceEEEeeCCC
Q 005387 153 IRAPRGDGKEAIVLVTPYNAVKG-----------------G----VRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQ 211 (699)
Q Consensus 153 lrAPRgdgtEaiVL~ap~~~~~~-----------------~----~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~ 211 (699)
++... .+...++|.+.+|..-. . .++..+++.++..++.+++.....++|.|+++-++
T Consensus 63 ~~g~~-~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~~~~~~~E 141 (373)
T 3gb0_A 63 LPATK-DGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNIPHGTIEFIITVGE 141 (373)
T ss_dssp ECCSS-TTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEESCG
T ss_pred ecCCC-CCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCCCCCCEEEEEEecc
Confidence 97532 24578999999987521 0 13336888889999999876667899999997554
Q ss_pred CCCchhHHHHH
Q 005387 212 YGEYAPVAAWL 222 (699)
Q Consensus 212 ~g~~~G~~AWL 222 (699)
+....|.++..
T Consensus 142 E~g~~Ga~~~~ 152 (373)
T 3gb0_A 142 ESGLVGAKALD 152 (373)
T ss_dssp GGTSHHHHHSC
T ss_pred ccCchhhhhhC
Confidence 43346777764
No 22
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=95.94 E-value=0.03 Score=61.43 Aligned_cols=76 Identities=18% Similarity=0.119 Sum_probs=62.4
Q ss_pred cccceEEEEEcCCCCCCceeEEEEEeeccCCCCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHH
Q 005387 144 LYGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLR 223 (699)
Q Consensus 144 ~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~ 223 (699)
..|.+.||=+.-| |+..+-||+++.++......+++.|+|+++.|||++++.. --+.+.|+|.+ +..|.++|++
T Consensus 163 ~~G~l~y~e~~ip-G~t~~~IllsaH~cHP~~ANDNaSG~a~lleLar~l~~~~-~~~t~rFvf~p----g~iGS~~yl~ 236 (435)
T 3k9t_A 163 EDGSLTYGEYYIR-GELEEEILLTTYTCHPSMCNDNLSGVALITFIAKALSKLK-TKYSYRFLFAP----ETIGSITWLS 236 (435)
T ss_dssp ESCEEEEEEEEEC-CSSSCEEEEEEECCCCSCTTTTHHHHHHHHHHHHHHTTSC-CSSEEEEEEEC----TTHHHHHHHH
T ss_pred cCCceEEEEEEec-CCCCCEEEEEEEcCCCCCCCccchHHHHHHHHHHHHhcCC-CCceEEEEEcC----ccHHHHHHHH
Confidence 3688888877533 4778999999999887666667889999999999999766 47899999987 4689999998
Q ss_pred Hh
Q 005387 224 DY 225 (699)
Q Consensus 224 aY 225 (699)
..
T Consensus 237 ~~ 238 (435)
T 3k9t_A 237 RN 238 (435)
T ss_dssp HC
T ss_pred hC
Confidence 44
No 23
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=95.76 E-value=1.5 Score=46.27 Aligned_cols=43 Identities=7% Similarity=0.000 Sum_probs=33.7
Q ss_pred cchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHH
Q 005387 178 RETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLR 223 (699)
Q Consensus 178 ~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~ 223 (699)
++..|++.++..++.+++ ..++|+|+++++++.+..|.+...+
T Consensus 182 D~k~g~a~~l~a~~~l~~---~~~~i~~~~~~~EE~g~~G~~~~~~ 224 (353)
T 1y0y_A 182 DDRIAVYTILEVAKQLKD---AKADVYFVATVQEEVGLRGARTSAF 224 (353)
T ss_dssp HHHHHHHHHHHHHHHCCS---CSSEEEEEEESCCTTTSHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhc---CCCeEEEEEECCcccchhHHHHHhh
Confidence 335688888999998876 5789999998776555678887764
No 24
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=95.69 E-value=0.086 Score=56.59 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEE
Q 005387 72 SEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (699)
Q Consensus 72 ~~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvyg 151 (699)
.+..++.++|-+...-+.. ..+.++||.++|+++|+++........ ......|++|
T Consensus 24 ~~~~~~l~~L~~ips~s~~-E~~~~~~l~~~l~~~G~~v~~~~~~~~-----------------------~~~~~~nvia 79 (396)
T 3rza_A 24 QRLLNTFLELVQIDSETGN-ESTIQPILKEKFIALGLDVKEDEAAKH-----------------------PKLGANNLVC 79 (396)
T ss_dssp HHHHHHHHHHHTSCCBTTC-TTTHHHHHHHHHHHTTCEEEECSGGGS-----------------------TTCSSCCEEE
T ss_pred HHHHHHHHHHeecCCCCcC-HHHHHHHHHHHHHHCCCEEEEeccccc-----------------------cCCCCceEEE
Confidence 4455666777666554433 346799999999999999875432110 0113579999
Q ss_pred EEcCCCC-CCceeEEEEEeeccCCC-----------C-----------ccchhhHHHHHHHHHHHhcCCccccceEEEee
Q 005387 152 IIRAPRG-DGKEAIVLVTPYNAVKG-----------G-----------VRETLSLGIAYSVFSLLTRVTWLAKDIIWLVA 208 (699)
Q Consensus 152 IlrAPRg-dgtEaiVL~ap~~~~~~-----------~-----------~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~ 208 (699)
.++...+ .+...++|.+.+|..-. + .++..+++.++..++.+++...+.++|.|+|+
T Consensus 80 ~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~~~~~ 159 (396)
T 3rza_A 80 TMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVIT 159 (396)
T ss_dssp EECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEE
T ss_pred EECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCCCCCCEEEEEE
Confidence 9976311 24568999999987510 0 12236888888889998866666899999997
Q ss_pred CCCCCCchhHHHHHH
Q 005387 209 DSQYGEYAPVAAWLR 223 (699)
Q Consensus 209 D~~~g~~~G~~AWL~ 223 (699)
-+++....|.++.++
T Consensus 160 ~~EE~g~~Ga~~~~~ 174 (396)
T 3rza_A 160 VGEESGLIGAKELNS 174 (396)
T ss_dssp SCGGGTSHHHHHCCG
T ss_pred cccccccHhHhhhch
Confidence 554433467777643
No 25
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=95.49 E-value=1 Score=46.97 Aligned_cols=43 Identities=7% Similarity=-0.005 Sum_probs=33.0
Q ss_pred chhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHH
Q 005387 179 ETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWL 222 (699)
Q Consensus 179 ~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL 222 (699)
+..+++.++..++.+++.. ..++|.|+++++++.+..|.+...
T Consensus 174 ~k~g~a~~l~a~~~l~~~~-~~~~i~~~~~~~EE~G~~G~~~~~ 216 (332)
T 2wyr_A 174 DRFGVVALIEAIKDLVDHE-LEGKVIFAFTVQEEVGLKGAKFLA 216 (332)
T ss_dssp HHHHHHHHHHHHHTTTTSC-CSSEEEEEEESCGGGTSHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhhcC-CCceEEEEEECccccCcchHHHHh
Confidence 3458888999999988766 579999999877654557777664
No 26
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=95.43 E-value=0.097 Score=56.54 Aligned_cols=119 Identities=13% Similarity=0.145 Sum_probs=78.8
Q ss_pred HHHHHHHHHHhhhcCCCC---------CccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccc
Q 005387 73 EANKLIKELNNLHSNPLG---------ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRS 143 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~---------~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~ 143 (699)
.+.++.++|-+....+.+ ...+..+||.++|+++|+++...
T Consensus 10 ~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~------------------------------ 59 (423)
T 1z2l_A 10 AIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFD------------------------------ 59 (423)
T ss_dssp HHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEEC------------------------------
T ss_pred HHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEe------------------------------
Confidence 344555566555543321 11235899999999999987531
Q ss_pred cccceEEEEEcCCCCCCceeEEEEEeeccCC--CCccchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCC-----Cc
Q 005387 144 LYGINTVGIIRAPRGDGKEAIVLVTPYNAVK--GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYG-----EY 215 (699)
Q Consensus 144 ~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~--~~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g-----~~ 215 (699)
..| |++|.++... .+...+++.+.+|... +..+...+++.+|..++.+++.. -+.++|.|+++.++++ ..
T Consensus 60 ~~g-nv~a~~~g~~-~~~~~i~l~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~ 137 (423)
T 1z2l_A 60 EVG-NLYGRLNGTE-YPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVF 137 (423)
T ss_dssp TTS-CEEEEECCSS-EEEEEEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSC
T ss_pred cCC-cEEEEEcCCC-CCCCEEEEEEecCCCCCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCc
Confidence 124 9999886421 2347899999998753 22344678888899999988654 3689999999755433 23
Q ss_pred hhHHHHHH
Q 005387 216 APVAAWLR 223 (699)
Q Consensus 216 ~G~~AWL~ 223 (699)
.|.++..+
T Consensus 138 ~Gs~~~~~ 145 (423)
T 1z2l_A 138 WGSKNIFG 145 (423)
T ss_dssp HHHHHHTT
T ss_pred ccHHHHHc
Confidence 58887654
No 27
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=95.32 E-value=0.17 Score=53.54 Aligned_cols=118 Identities=15% Similarity=0.115 Sum_probs=80.9
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCc-eeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle-~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
..++.++|-+...-+.. ..+..+||.++|+++|++ +.. ...|.|+++.
T Consensus 15 ~~~~~~~l~~~ps~s~~-e~~~~~~l~~~l~~~G~~~~~~------------------------------~~~~~~~~a~ 63 (369)
T 3tx8_A 15 PIVLTQRLVDIPSPSGQ-EKQIADEIEDALRNLNLPGVEV------------------------------FRFNNNVLAR 63 (369)
T ss_dssp HHHHHHHHHSSCCBTTC-THHHHHHHHHHHHTTTCTTCEE------------------------------EEETTEEEEE
T ss_pred HHHHHHHHhcCCCCCcc-HHHHHHHHHHHHHhcCCCCcEE------------------------------eccCCcEEEE
Confidence 34566667666554433 336789999999999974 211 1136789998
Q ss_pred EcCCCCCCceeEEEEEeeccCC-----------------CCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCc
Q 005387 153 IRAPRGDGKEAIVLVTPYNAVK-----------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEY 215 (699)
Q Consensus 153 lrAPRgdgtEaiVL~ap~~~~~-----------------~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~ 215 (699)
++.. +...++|.+.+|... +..+...+++.++..++.+++..-+.+||.|+|+-+++...
T Consensus 64 ~~~~---~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE~g~ 140 (369)
T 3tx8_A 64 TNRG---LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATSTELKHDLTLIAYECEEVAD 140 (369)
T ss_dssp CCCC---CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSCTTCCSEEEEEEECCCSSCT
T ss_pred ecCC---CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhhcCCCccEEEEEEeccccCc
Confidence 8653 346899999997532 22244468888899999998755568999999974433222
Q ss_pred --hhHHHHHHHh
Q 005387 216 --APVAAWLRDY 225 (699)
Q Consensus 216 --~G~~AWL~aY 225 (699)
.|+++.++++
T Consensus 141 ~~~G~~~~~~~~ 152 (369)
T 3tx8_A 141 HLNGLGHIRDEH 152 (369)
T ss_dssp TSCHHHHHHHHC
T ss_pred ccccHHHHHHhc
Confidence 6899888875
No 28
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=95.24 E-value=0.21 Score=54.88 Aligned_cols=134 Identities=7% Similarity=0.039 Sum_probs=82.5
Q ss_pred HHHHHHHHHhhhcCCCCC-----ccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccce
Q 005387 74 ANKLIKELNNLHSNPLGA-----TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGIN 148 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~-----~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~N 148 (699)
..++.++|-+...-+.+. ..+..+||.++|+++|+++..+..... .. ..+.....+.|
T Consensus 22 ~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~----------------~~-~~~~~~~~~~~ 84 (479)
T 2zog_A 22 YVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQ----------------KL-PDGSEIPLPPI 84 (479)
T ss_dssp HHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEE----------------EC-TTSCEEECCCE
T ss_pred HHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeecccc----------------cc-CCCcccCCCCE
Confidence 344455555544433221 025689999999999999876543110 00 00000001279
Q ss_pred EEEEEcCCCCCCceeEEEEEeeccCCCC------------------------ccchhhHHHHHHHHHHHhcCCc-cccce
Q 005387 149 TVGIIRAPRGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIAYSVFSLLTRVTW-LAKDI 203 (699)
Q Consensus 149 vygIlrAPRgdgtEaiVL~ap~~~~~~~------------------------~~~~~sval~LaLa~yl~r~~~-wAKDI 203 (699)
|+|.+.. +.+...++|.+.+|..-.+ .++..+++.+|..++.+++... +..+|
T Consensus 85 v~a~~~~--~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v 162 (479)
T 2zog_A 85 LLGKLGS--DPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNL 162 (479)
T ss_dssp EEEEECC--CTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEE
T ss_pred EEEEecC--CCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcE
Confidence 9999864 2234689999998753110 1223688889999999986543 56799
Q ss_pred EEEeeCCCCCCchhHHHHHHHhc
Q 005387 204 IWLVADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 204 Ifl~~D~~~g~~~G~~AWL~aYH 226 (699)
.|+|+-+++....|.+++++++.
T Consensus 163 ~~~~~~~EE~g~~Ga~~~~~~~~ 185 (479)
T 2zog_A 163 RFCLEGMEESGSEGLDELIFAQK 185 (479)
T ss_dssp EEEEESCGGGTCTTHHHHHHHTT
T ss_pred EEEEecccccCCccHHHHHHhhh
Confidence 99997544433478999999863
No 29
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.21 E-value=0.029 Score=64.87 Aligned_cols=83 Identities=12% Similarity=0.220 Sum_probs=66.2
Q ss_pred cccceEEEEEcCCCCCCceeEEEEEeeccCCC-CccchhhHHHHHHHHHHHhcC----Cc-cccceEEEeeCCCCCCchh
Q 005387 144 LYGINTVGIIRAPRGDGKEAIVLVTPYNAVKG-GVRETLSLGIAYSVFSLLTRV----TW-LAKDIIWLVADSQYGEYAP 217 (699)
Q Consensus 144 ~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~~-~~~~~~sval~LaLa~yl~r~----~~-wAKDIIfl~~D~~~g~~~G 217 (699)
....||+|.++... +..|.||+.+++|+... ..+++.|++.+|.++|.|++. .| -.|+|+|++.++++.+..|
T Consensus 264 ~~~~NVi~~i~G~~-~~~~~vvvgaH~Ds~~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~gl~G 342 (640)
T 3kas_A 264 IKILNIFGVIKGFV-EPDHYVVVGAQRDAWGPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGSVG 342 (640)
T ss_dssp EEEEEEEEEECCSS-EEEEEEEEEEECCCSSCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGTSHH
T ss_pred eeEEEEEEEEeCCc-CCCCceeeecccCCCCCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccCchh
Confidence 56789999998742 34589999999998643 335578999999999999753 23 3699999999988778899
Q ss_pred HHHHHHHhcC
Q 005387 218 VAAWLRDYHT 227 (699)
Q Consensus 218 ~~AWL~aYH~ 227 (699)
.++|+++|..
T Consensus 343 S~~~~~~~~~ 352 (640)
T 3kas_A 343 ATEWLEGYLS 352 (640)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHhhhh
Confidence 9999998754
No 30
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=95.18 E-value=0.22 Score=53.91 Aligned_cols=117 Identities=9% Similarity=0.058 Sum_probs=79.8
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+...-+.. ..+..+||.++|+++|+++..+. .+.|+++.+
T Consensus 30 ~i~~~~~l~~ips~s~~-e~~~~~~l~~~l~~~G~~v~~~~------------------------------~~~~l~a~~ 78 (418)
T 1xmb_A 30 MVKIRRKIHENPELGYE-ELETSKLIRSELELIGIKYRYPV------------------------------AITGVIGYI 78 (418)
T ss_dssp HHHHHHHHHHSCCCTTC-CHHHHHHHHHHHHHHTCCEEEEE------------------------------TTTEEEEEE
T ss_pred HHHHHHHHHhCCCCCCC-hHHHHHHHHHHHHHcCCeeEecc------------------------------CCcEEEEEE
Confidence 44555556555543333 34678999999999999875321 146899999
Q ss_pred cCCCCCCceeEEEEEeeccCCCCc----------cc-------hhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCCCc
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKGGV----------RE-------TLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEY 215 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~~~----------~~-------~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g~~ 215 (699)
+.. +. ..++|.+.+|....+. ++ ..+++.++..++.+++... +.++|.|+++-+++ ..
T Consensus 79 ~~~--~~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE-g~ 154 (418)
T 1xmb_A 79 GTG--EP-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE-GL 154 (418)
T ss_dssp ESS--SS-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT-TT
T ss_pred cCC--CC-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecccc-cc
Confidence 752 22 6899999987642110 00 1578888999999987653 68899999974444 45
Q ss_pred hhHHHHHHHh
Q 005387 216 APVAAWLRDY 225 (699)
Q Consensus 216 ~G~~AWL~aY 225 (699)
.|+++.+++.
T Consensus 155 ~G~~~~~~~g 164 (418)
T 1xmb_A 155 SGAKKMREEG 164 (418)
T ss_dssp CHHHHHHHTT
T ss_pred ccHHHHHHcC
Confidence 7999998864
No 31
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.13 E-value=0.044 Score=64.12 Aligned_cols=83 Identities=16% Similarity=0.230 Sum_probs=66.1
Q ss_pred cccceEEEEEcCCCCCCceeEEEEEeeccCC-CCccchhhHHHHHHHHHHHhcC---Cc-cccceEEEeeCCCCCCchhH
Q 005387 144 LYGINTVGIIRAPRGDGKEAIVLVTPYNAVK-GGVRETLSLGIAYSVFSLLTRV---TW-LAKDIIWLVADSQYGEYAPV 218 (699)
Q Consensus 144 ~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~-~~~~~~~sval~LaLa~yl~r~---~~-wAKDIIfl~~D~~~g~~~G~ 218 (699)
....||+|.++.. .+..|.||+.+++|+.. +..+++.|++.+|.++|.|++. .| -.|+|+|++.++++.+..|.
T Consensus 310 ~~~~NVi~~i~G~-~~~~~~vllgaH~Ds~~~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl~GS 388 (707)
T 3fed_A 310 TRIYNVVGTIRGS-VEPDRYVILGGHRDSWVFGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGS 388 (707)
T ss_dssp EEEEEEEEEECCS-SEEEEEEEEEEECCCSSSCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHH
T ss_pred EEEEEEEEEEeCC-CCCCceEEEeccccCCCCCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccccchhH
Confidence 4678999999853 23568999999999864 3445678999999999998752 22 37999999999887788999
Q ss_pred HHHHHHhcC
Q 005387 219 AAWLRDYHT 227 (699)
Q Consensus 219 ~AWL~aYH~ 227 (699)
++|++++..
T Consensus 389 ~~~~~~~~~ 397 (707)
T 3fed_A 389 TEWAEENVK 397 (707)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhcch
Confidence 999998753
No 32
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=95.00 E-value=0.26 Score=52.74 Aligned_cols=119 Identities=12% Similarity=0.062 Sum_probs=74.4
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+...-+.. .....+||.++|+++|+++..+.+ -...|+++.+
T Consensus 8 ~~~~l~~lv~~ps~s~~-e~~~~~~l~~~l~~~G~~~~~~~~----------------------------~~~~nv~a~~ 58 (393)
T 1vgy_A 8 SLELAKELISRPSVTPD-DRDCQKLMAERLHKIGFAAEEMHF----------------------------GNTKNIWLRR 58 (393)
T ss_dssp HHHHHHHHHTSCCBTTC-CTTHHHHHHHHHHTTTCEEEECCB----------------------------TTBCEEEEEE
T ss_pred HHHHHHHHhcCCCCCCC-cHHHHHHHHHHHHHcCCcEEEEec----------------------------CCCcEEEEEE
Confidence 34555666555543332 235789999999999998764321 0246899987
Q ss_pred cCCCCCCceeEEEEEeeccCCCC------------------------ccchhhHHHHHHHHHHHhc-CCccccceEEEee
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIAYSVFSLLTR-VTWLAKDIIWLVA 208 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~~------------------------~~~~~sval~LaLa~yl~r-~~~wAKDIIfl~~ 208 (699)
. .+...+++.+.+|....+ .+...+++.++..++.+++ ..-+.++|.|+|+
T Consensus 59 -g---~~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~ 134 (393)
T 1vgy_A 59 -G---TKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLIT 134 (393)
T ss_dssp -C---SSSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEE
T ss_pred -C---CCCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEE
Confidence 3 245689999998753211 1333566776666676654 3346899999996
Q ss_pred CCCC-CCchhHHHHHHHh
Q 005387 209 DSQY-GEYAPVAAWLRDY 225 (699)
Q Consensus 209 D~~~-g~~~G~~AWL~aY 225 (699)
-+++ +...|.+..++..
T Consensus 135 ~~EE~~~~~Ga~~~~~~~ 152 (393)
T 1vgy_A 135 SDEEGDALDGTTKVVDVL 152 (393)
T ss_dssp SCSSSCCTTSHHHHHHHH
T ss_pred eccccCCcCCHHHHHHHH
Confidence 4433 2346777666543
No 33
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=94.79 E-value=0.23 Score=53.07 Aligned_cols=44 Identities=9% Similarity=-0.038 Sum_probs=34.1
Q ss_pred chhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHH
Q 005387 179 ETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLR 223 (699)
Q Consensus 179 ~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~ 223 (699)
+..|++.++..++.+++.. ..+||+|+++++++....|.+...+
T Consensus 185 ~k~g~a~~l~a~~~l~~~~-~~~~v~~~~~~~EE~G~~G~~~~~~ 228 (373)
T 1vhe_A 185 NRIGCAIAIDVLRNLQNTD-HPNIVYGVGTVQEEVGLRGAKTAAH 228 (373)
T ss_dssp HHHHHHHHHHHHHHHHTSC-CSSEEEEEEESCCTTTSHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhcC-CCceEEEEEECCcccChhhHHHHhc
Confidence 3468899999999988765 5689999998776555678887754
No 34
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=94.65 E-value=0.33 Score=53.62 Aligned_cols=114 Identities=10% Similarity=0.085 Sum_probs=74.2
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
...+||.++|+++|+++..+..... + ...+.....+.|++|.+.. +.+...++|.+.+|..
T Consensus 54 ~~~~~l~~~l~~~G~~~~~~~~~~~----------------~-~~~g~~~~~~~~v~a~~~~--~~~~~~i~l~aH~D~v 114 (485)
T 3dlj_A 54 RMMAVAADTLQRLGARVASVDMGPQ----------------Q-LPDGQSLPIPPVILAELGS--DPTKGTVCFYGHLDVQ 114 (485)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCEE----------------E-C--CCEEECCCEEEEEECC--CTTSCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHcCCeEEEEecCcc----------------c-ccCCCccCCCcEEEEEECC--CCCCCEEEEEeeecCC
Confidence 4578999999999999876542100 0 0000000114689999854 2345789999998752
Q ss_pred CC------------------------CccchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCCCchhHHHHHHHhc
Q 005387 174 KG------------------------GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (699)
Q Consensus 174 ~~------------------------~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g~~~G~~AWL~aYH 226 (699)
-. ..+...+++.+|..++.+++.. =+..+|.|+|+-+++....|+++.++++-
T Consensus 115 p~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~ 192 (485)
T 3dlj_A 115 PADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNIKFIIEGMEEAGSVALEELVEKEK 192 (485)
T ss_dssp CCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTHHHHHHHHT
T ss_pred CCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCccEEEEEEcccccCCccHHHHHHhhh
Confidence 11 1123357888888899988654 35789999997444333468999999874
No 35
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=94.65 E-value=0.097 Score=57.01 Aligned_cols=130 Identities=9% Similarity=0.076 Sum_probs=79.0
Q ss_pred cceeeeccchhH-HHHHHHHHHHHhhhcCCCCC---------ccchHHHHHHHHHHcCCc-eeeeccccCCccCCCcccc
Q 005387 60 GSASSMLSNQEV-SEANKLIKELNNLHSNPLGA---------TTESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFF 128 (699)
Q Consensus 60 G~v~~~f~~~~~-~~a~~y~~el~~~~~~~~~~---------~~~~~~~l~~~l~~lGle-~~~q~f~~~~~~f~~l~~f 128 (699)
|.+|.||..+.. +...+..++|-+....+.+. ..+..+||.++|+++|++ +...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d--------------- 78 (434)
T 3ife_A 14 GTENLYFQSNAMKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD--------------- 78 (434)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC---------------
T ss_pred CcccchhhhHHHHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC---------------
Confidence 556666664332 23444445555544333321 236789999999999997 6431
Q ss_pred cCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccCCC--C------------------------------
Q 005387 129 SGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVKG--G------------------------------ 176 (699)
Q Consensus 129 ~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~~~--~------------------------------ 176 (699)
..-||+|.+++....+...++|.+++|..-. +
T Consensus 79 ----------------~~~nv~a~~~g~~~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~ 142 (434)
T 3ife_A 79 ----------------DNGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQ 142 (434)
T ss_dssp ----------------TTSCEEEEECCBSSSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTT
T ss_pred ----------------CCcEEEEEeCCCCCCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhh
Confidence 1248999997643334578999999986521 0
Q ss_pred ----------------------ccchhhHHHHHHHHHHHhcC-CccccceEEEeeCCCCCCchhHHHH
Q 005387 177 ----------------------VRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGEYAPVAAW 221 (699)
Q Consensus 177 ----------------------~~~~~sval~LaLa~yl~r~-~~wAKDIIfl~~D~~~g~~~G~~AW 221 (699)
.++..+++.+|..++.+++. .-+.++|.|+|+=+++.. .|+++.
T Consensus 143 ~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~ 209 (434)
T 3ife_A 143 FPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHF 209 (434)
T ss_dssp CTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGC
T ss_pred ChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHh
Confidence 12236788899999999876 456899999996333322 566554
No 36
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=94.59 E-value=0.068 Score=56.83 Aligned_cols=121 Identities=13% Similarity=0.171 Sum_probs=79.2
Q ss_pred HHHHHHHHHHhhhcCCC--CCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEE
Q 005387 73 EANKLIKELNNLHSNPL--GATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~--~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvy 150 (699)
+..++.++|-+...-+. .......+||.++|+++|+++... +.|++
T Consensus 7 ~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--------------------------------~~~~~ 54 (364)
T 2rb7_A 7 HIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--------------------------------DHDGI 54 (364)
T ss_dssp HHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--------------------------------EETTE
T ss_pred HHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--------------------------------cCCCc
Confidence 34556666666554431 112346899999999999976421 24677
Q ss_pred EEEcCCCCCCceeEEEEEeeccCCC------------------CccchhhHHHHHHHHHHHhcCCc-c---ccc--eEEE
Q 005387 151 GIIRAPRGDGKEAIVLVTPYNAVKG------------------GVRETLSLGIAYSVFSLLTRVTW-L---AKD--IIWL 206 (699)
Q Consensus 151 gIlrAPRgdgtEaiVL~ap~~~~~~------------------~~~~~~sval~LaLa~yl~r~~~-w---AKD--IIfl 206 (699)
+.+++..+.+...++|.+.+|.... ..+...+++.++..++.+++... + .++ |.|+
T Consensus 55 ~~~~~~~~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~ 134 (364)
T 2rb7_A 55 PSVMVLPEKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLL 134 (364)
T ss_dssp EEEEECSBTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEE
T ss_pred eEEEEEcCCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEE
Confidence 8887633445678999999876421 12445578888999999876532 2 458 9999
Q ss_pred eeCCCC-CCchhHHHHHHHh
Q 005387 207 VADSQY-GEYAPVAAWLRDY 225 (699)
Q Consensus 207 ~~D~~~-g~~~G~~AWL~aY 225 (699)
++-+++ +...|+++.++++
T Consensus 135 ~~~~EE~~g~~G~~~~~~~~ 154 (364)
T 2rb7_A 135 ITGDEEIGGMNGAAKALPLI 154 (364)
T ss_dssp EESCGGGTSTTTHHHHGGGC
T ss_pred EEeccccCchhhHHHHHhcC
Confidence 975443 3446888777654
No 37
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=94.58 E-value=0.41 Score=50.30 Aligned_cols=119 Identities=16% Similarity=0.098 Sum_probs=74.5
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+...-+... .+.+++|.++|+++|+++..+.. . ...|++|.+
T Consensus 5 ~~~~~~~L~~~ps~s~~e-~~~~~~l~~~l~~~g~~~~~~~~---------------------------~-~~~n~~a~~ 55 (377)
T 3isz_A 5 VVSLAQDLIRRPSISPND-EGCQQIIAERLEKLGFQIEWMPF---------------------------N-DTLNLWAKH 55 (377)
T ss_dssp HHHHHHHHHTSCCBTTCC-TTHHHHHHHHHHHTTCEEEECCB---------------------------T-TBCEEEEEE
T ss_pred HHHHHHHHhcCCCCCCCh-hhHHHHHHHHHHHCCCceEEeec---------------------------C-CCceEEEEe
Confidence 445667776665544332 36789999999999998864321 0 236899876
Q ss_pred cCCCCCCceeEEEEEeeccCCCC------------------------ccchhhHHHHHHHHHHHh-cCCccccceEEEee
Q 005387 154 RAPRGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIAYSVFSLLT-RVTWLAKDIIWLVA 208 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~~~~------------------------~~~~~sval~LaLa~yl~-r~~~wAKDIIfl~~ 208 (699)
|.+...++|.+.+|..... .+...+++.++..++.++ ...-+.++|.|+++
T Consensus 56 ----g~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~ 131 (377)
T 3isz_A 56 ----GTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLIT 131 (377)
T ss_dssp ----ESSSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEE
T ss_pred ----CCCCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEE
Confidence 2345789999999753211 022345666666555544 44456889999996
Q ss_pred CCCCC-CchhHHHHHHHh
Q 005387 209 DSQYG-EYAPVAAWLRDY 225 (699)
Q Consensus 209 D~~~g-~~~G~~AWL~aY 225 (699)
-+++. ...|.++.++..
T Consensus 132 ~~EE~~~~~G~~~~~~~~ 149 (377)
T 3isz_A 132 SDEEATAKDGTIHVVETL 149 (377)
T ss_dssp SCSSSCCSSSHHHHHHHH
T ss_pred cccccCccccHHHHHHHH
Confidence 43332 225777777654
No 38
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=94.40 E-value=0.23 Score=55.20 Aligned_cols=118 Identities=11% Similarity=0.063 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEE
Q 005387 71 VSEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (699)
Q Consensus 71 ~~~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~Nvy 150 (699)
.....++.++|.+...-+.+ ..+..+||.++|+++|+++... ...|++
T Consensus 13 ~~~~~~~~~~L~~ips~s~~-e~~~~~~l~~~l~~~G~~v~~~-------------------------------~~~nv~ 60 (490)
T 3mru_A 13 PAPLWQFFDKICSIPHPSKH-EEALAQYIVTWATEQGFDVRRD-------------------------------PTGNVF 60 (490)
T ss_dssp SHHHHHHHHHHHHSCCBTTC-CTTHHHHHHHHHHHTTCEEEEC-------------------------------TTCCEE
T ss_pred HHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHcCCEEEEc-------------------------------CCCeEE
Confidence 34456777888777654433 3467999999999999987531 123899
Q ss_pred EEEcCCCC-CCceeEEEEEeeccCCCC--------------------------c----cchhhHHHHHHHHHHHhcCCcc
Q 005387 151 GIIRAPRG-DGKEAIVLVTPYNAVKGG--------------------------V----RETLSLGIAYSVFSLLTRVTWL 199 (699)
Q Consensus 151 gIlrAPRg-dgtEaiVL~ap~~~~~~~--------------------------~----~~~~sval~LaLa~yl~r~~~w 199 (699)
+.+++..| .+...++|.+.+|..-.. . ++..+++.+|+.+ ++...+
T Consensus 61 a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~~~~~ 137 (490)
T 3mru_A 61 IKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---ASKEIK 137 (490)
T ss_dssp EEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HCSSCC
T ss_pred EEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---HhCCCC
Confidence 99987654 467899999999753111 0 3345677666654 344455
Q ss_pred ccceEEEeeCCCCCCchhHHHHHH
Q 005387 200 AKDIIWLVADSQYGEYAPVAAWLR 223 (699)
Q Consensus 200 AKDIIfl~~D~~~g~~~G~~AWL~ 223 (699)
.++|.|+|+-+++....|.++.++
T Consensus 138 ~~~v~~~~~~~EE~g~~Ga~~~~~ 161 (490)
T 3mru_A 138 HGPIEVLLTIDEEAGMTGAFGLEA 161 (490)
T ss_dssp CCSEEEEEESCSSSTTGGGGTCCS
T ss_pred CCCEEEEEEcccccccHhHHHhhh
Confidence 889999997554434467766554
No 39
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=94.34 E-value=0.16 Score=56.10 Aligned_cols=97 Identities=14% Similarity=0.184 Sum_probs=68.8
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..+||.++|+++|+++... ..| |++|.+++.. ++. .+++.+.+|..
T Consensus 71 ~~~~~l~~~l~~~G~~v~~d------------------------------~~g-nvia~~~g~~-~~~-~i~l~~H~DtV 117 (474)
T 2v8h_A 71 AMRDWFTNECESLGCKVKVD------------------------------KIG-NMFAVYPGKN-GGK-PTATGSHLDTQ 117 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEEB------------------------------TTC-CEEEEECCSS-CCS-CEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEEEe------------------------------cCc-eEEEEECCCC-CCC-eEEEEEecccC
Confidence 35899999999999987521 123 8999887432 233 79999999864
Q ss_pred C--CCccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCCCC-----CchhHHHHHH
Q 005387 174 K--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAWLR 223 (699)
Q Consensus 174 ~--~~~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~~g-----~~~G~~AWL~ 223 (699)
- +..+...+++.+|..++.+++... +.++|.|+|+-+++. ...|.++..+
T Consensus 118 p~~g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 118 PEAGKYDGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp SSBCSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 3 223456789999999999986543 589999999644332 3458887753
No 40
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=94.09 E-value=2.2 Score=44.63 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=31.3
Q ss_pred hhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHH
Q 005387 180 TLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRD 224 (699)
Q Consensus 180 ~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~a 224 (699)
..|++.++.+++.+++.. ...|+.++++++++-...|.+.-...
T Consensus 171 k~g~aa~l~al~~l~~~~-~~~~~~~~~t~~EEvG~~Ga~~~~~~ 214 (348)
T 1ylo_A 171 RLSCYLLVTLLRELHDAE-LPAEVWLVASSSEEVGLRGGQTATRA 214 (348)
T ss_dssp HHHHHHHHHHHHHHTTCC-CSSEEEEEEESCCTTSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcC-CCceEEEEEEcccccchhHHHHhhcc
Confidence 357888888888887655 56899999998765445676654443
No 41
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=93.71 E-value=0.46 Score=51.09 Aligned_cols=120 Identities=8% Similarity=0.024 Sum_probs=76.4
Q ss_pred HHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
+..+++++|.+...-+.+ .....+||.++|+++|+++.+.. .-.++|++|.
T Consensus 17 ~~~~~~~~l~~~pe~s~~-E~~~~~~i~~~l~~~G~~v~~~~----------------------------~g~~~~via~ 67 (394)
T 3ram_A 17 SYIEISHRIHERPELGNE-EIFASRTLIDRLKEHDFEIETEI----------------------------AGHATGFIAT 67 (394)
T ss_dssp HHHHHHHHHHHSCCCTTC-CHHHHHHHHHHHHHTTCEEEEEE----------------------------TTEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCcc-hHHHHHHHHHHHHHcCCeEEeCC----------------------------CCCceEEEEE
Confidence 455666777666654433 23678999999999999876431 0135799999
Q ss_pred EcCCCCCCceeEEEEEeeccCCCC----ccchhhHHHHHHHHHHHhcC-CccccceEEEeeCCCCCC-chhHH-HHHHH
Q 005387 153 IRAPRGDGKEAIVLVTPYNAVKGG----VRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGE-YAPVA-AWLRD 224 (699)
Q Consensus 153 lrAPRgdgtEaiVL~ap~~~~~~~----~~~~~sval~LaLa~yl~r~-~~wAKDIIfl~~D~~~g~-~~G~~-AWL~a 224 (699)
++..+ +...|+|.+.+|..-+. ..+. -.+.++..++.+++. .-+..+|.|+|+-++++. ..|.+ +-+++
T Consensus 68 ~~g~~--~g~~i~l~ah~D~vpg~~ha~G~d~-~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~ 143 (394)
T 3ram_A 68 YDSGL--DGPAIGFLAEYDALPGLGHACGHNI-IGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKA 143 (394)
T ss_dssp EECSS--SSCEEEEEECCCCCTTTSSTTCHHH-HHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHH
T ss_pred EeCCC--CCCEEEEEEecccCCCcceECCccH-HHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHc
Confidence 98642 22689999999875310 0112 234455566777654 346899999996443333 36788 44453
No 42
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=93.58 E-value=0.32 Score=53.99 Aligned_cols=100 Identities=13% Similarity=0.226 Sum_probs=70.4
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..+||.++|+++|+++... .|++++++ .+++...++|.+.+|..
T Consensus 67 ~~~~~l~~~l~~~G~~~~~~---------------------------------~~~~~~~~--~g~~~~~i~l~~H~D~v 111 (492)
T 3khx_A 67 KALDYMYEIAHRDGFTTHDV---------------------------------DHIAGRIE--AGKGNDVLGILCHVDVV 111 (492)
T ss_dssp HHHHHHHHHHHHTTCEEEEE---------------------------------TTTEEEEE--EECSSCEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCcceEe---------------------------------CCEEEEEE--eCCCCCEEEEEEeccCC
Confidence 56899999999999987421 13455554 24556789999988642
Q ss_pred C----------------------CCccchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCCCchhHHHHHHHhcCC
Q 005387 174 K----------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYHTP 228 (699)
Q Consensus 174 ~----------------------~~~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g~~~G~~AWL~aYH~~ 228 (699)
- +..+...+++.++..++.+++.. -+.++|.|+|+-+++....|++++++++..+
T Consensus 112 p~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~~ 189 (492)
T 3khx_A 112 PAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEMP 189 (492)
T ss_dssp CCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTCCCCTTSHHHHHSCCC
T ss_pred CCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCcCHHHHHHhCcCC
Confidence 1 11133467888888889888654 3688999999644444457999999998654
No 43
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=93.26 E-value=0.77 Score=50.15 Aligned_cols=99 Identities=14% Similarity=0.165 Sum_probs=66.7
Q ss_pred chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeeccC
Q 005387 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~~ 173 (699)
+..+||.++|+++|+++... .+.++++.+ |.+...++|.+.+|..
T Consensus 47 ~~~~~l~~~l~~~G~~~~~~-------------------------------~~~~~~~~~----g~~~~~i~l~~H~D~v 91 (470)
T 1lfw_A 47 DAMTKFLSFAKRDGFDTENF-------------------------------ANYAGRVNF----GAGDKRLGIIGHMDVV 91 (470)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-------------------------------TTTEEEEEE----CCCSSEEEEEEECCBC
T ss_pred HHHHHHHHHHHHcCCeEEEe-------------------------------cCeEEEEEe----CCCCCeEEEEEeeccc
Confidence 45799999999999987421 123445544 2345789999888642
Q ss_pred C----------------CC-------ccchhhHHHHHHHHHHHhcCC-ccccceEEEeeCCCCCCchhHHHHHHHhcC
Q 005387 174 K----------------GG-------VRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYHT 227 (699)
Q Consensus 174 ~----------------~~-------~~~~~sval~LaLa~yl~r~~-~wAKDIIfl~~D~~~g~~~G~~AWL~aYH~ 227 (699)
- ++ .++..+++.+|..++.+++.. -+.++|.|+|+-+++....|++++++++..
T Consensus 92 p~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~~ 169 (470)
T 1lfw_A 92 PAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHEPT 169 (470)
T ss_dssp CCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCHHHHHHHHHSCC
T ss_pred CCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCccHHHHHHhCcC
Confidence 1 00 122358888898899987644 358999999964444345789999987644
No 44
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=93.10 E-value=0.34 Score=53.54 Aligned_cols=118 Identities=9% Similarity=0.076 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEE
Q 005387 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygI 152 (699)
...++.++|.+....+.. ..+..+||.++|+++|+++... ...|++|.
T Consensus 12 ~~~~~~~~l~~ips~s~~-e~~~~~~l~~~l~~~G~~~~~~-------------------------------~~~nv~a~ 59 (487)
T 2qyv_A 12 LLWQWFDQICAIPHPSYK-EEQLAQFIINWAKTKGFFAERD-------------------------------EVGNVLIR 59 (487)
T ss_dssp HHHHHHHHHHHSCCBTTC-CHHHHHHHHHHHHHTTCEEEEC-------------------------------TTCCEEEE
T ss_pred HHHHHHHHHHcCCCCCCc-HHHHHHHHHHHHHHcCCEEEEc-------------------------------CCCcEEEE
Confidence 456677777776654433 3467999999999999987521 12389999
Q ss_pred EcCCCC-CCceeEEEEEeeccCCCC--------------------------c----cchhhHHHHHHHHHHHhcCCcccc
Q 005387 153 IRAPRG-DGKEAIVLVTPYNAVKGG--------------------------V----RETLSLGIAYSVFSLLTRVTWLAK 201 (699)
Q Consensus 153 lrAPRg-dgtEaiVL~ap~~~~~~~--------------------------~----~~~~sval~LaLa~yl~r~~~wAK 201 (699)
+++..| .+...++|.+.+|..... . ++..+++.+|+.++ ....+.+
T Consensus 60 ~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~---~~~~~~~ 136 (487)
T 2qyv_A 60 KPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLE---SNDIAHP 136 (487)
T ss_dssp ECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHH---CSSSCCS
T ss_pred eCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHH---hCCCCCC
Confidence 876433 455789999998753110 0 22356776676665 2234678
Q ss_pred ceEEEeeCCCCCCchhHHHHHHHh
Q 005387 202 DIIWLVADSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 202 DIIfl~~D~~~g~~~G~~AWL~aY 225 (699)
+|.|+|+-+++....|.++.+++.
T Consensus 137 ~v~~~~~~~EE~g~~Ga~~~~~~~ 160 (487)
T 2qyv_A 137 ELEVLLTMTEERGMEGAIGLRPNW 160 (487)
T ss_dssp SEEEEEESCTTTTCHHHHTCCSSC
T ss_pred CEEEEEEeccccCCHHHHHHHHhc
Confidence 999999755443457888876643
No 45
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=93.06 E-value=0.61 Score=51.35 Aligned_cols=102 Identities=9% Similarity=0.064 Sum_probs=69.4
Q ss_pred chHHHHHHHHHHcCCc---eeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEee
Q 005387 94 ESHGIIAKYMSNLGAQ---VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPY 170 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle---~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~ 170 (699)
+..+++.++|+++|++ +..++. .-.+.||+|.++. .+...++|.+.+
T Consensus 49 ~~~~~i~~~l~~~G~~~~~~~~~~~---------------------------~~~~~~v~a~~~g---~~~~~i~l~~H~ 98 (472)
T 3pfe_A 49 QAVNHIANWCKSHAPKGMTLEIVRL---------------------------KNRTPLLFMEIPG---QIDDTVLLYGHL 98 (472)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEECC---------------------------TTSCCEEEEEECC---SEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCcceEEEec---------------------------CCCCcEEEEEEcC---CCCCeEEEEccc
Confidence 4578999999999986 222110 0124799999976 345789999988
Q ss_pred ccC------C------------------CCccchhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHh
Q 005387 171 NAV------K------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 171 ~~~------~------------------~~~~~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aY 225 (699)
|.. + +..+...+++.+|..++.+++...--++|.|+|+-+++....|+++.++++
T Consensus 99 D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~ 177 (472)
T 3pfe_A 99 DKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYPRCILIIEACEESGSYDLPFYIELL 177 (472)
T ss_dssp CBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCEEEEEEEESCGGGTSTTHHHHHHHH
T ss_pred cCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCCcEEEEEEeCCCCCChhHHHHHHHh
Confidence 621 1 111223578888888999887655445999999644333347899999987
No 46
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=92.86 E-value=2.3 Score=44.56 Aligned_cols=39 Identities=15% Similarity=0.126 Sum_probs=28.1
Q ss_pred hhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHH
Q 005387 180 TLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVA 219 (699)
Q Consensus 180 ~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~ 219 (699)
..|++.++.+++.+++.. +..|+.++++++++-...|.+
T Consensus 174 r~g~aa~l~al~~l~~~~-~~~~~~~~~t~~EEvG~~Ga~ 212 (346)
T 1vho_A 174 RASCGVLVKVLEFLKRYD-HPWDVYVVFSVQEETGCLGAL 212 (346)
T ss_dssp HHHHHHHHHHHHHHTTCC-CSSEEEEEEECTTSSSHHHHH
T ss_pred HHHHHHHHHHHHHhhhcC-CCceEEEEEECCcccchhhHH
Confidence 457788888888887665 568999999987543334444
No 47
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=92.77 E-value=0.25 Score=53.25 Aligned_cols=97 Identities=9% Similarity=0.076 Sum_probs=64.7
Q ss_pred chHHHHHHHHHHcCCc-eeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcCCCCCCceeEEEEEeecc
Q 005387 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 94 ~~~~~l~~~l~~lGle-~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrAPRgdgtEaiVL~ap~~~ 172 (699)
+..+||.++|+++|++ +... ...|++|.+++..+.+...++|.+.+|.
T Consensus 33 ~~~~~l~~~l~~~G~~~~~~~-------------------------------~~~nvia~~~g~~~~~~~~i~l~aH~D~ 81 (417)
T 1fno_A 33 KLLRLLKQQLEEMGLVNITLS-------------------------------EKGTLMATLPANVEGDIPAIGFISHVDT 81 (417)
T ss_dssp HHHHHHHHHHHHHTCEEEEEC-------------------------------TTCCEEEEECCSSCSCCCCEEEEEECCB
T ss_pred HHHHHHHHHHHHcCCCeEEEC-------------------------------CCceEEEEECCCCCCCCCceEEEEeccc
Confidence 5689999999999998 5321 1348999997532212457999998875
Q ss_pred CC----------------CC-------------------------------------ccchhhHHHHHHHHHHHhcCCcc
Q 005387 173 VK----------------GG-------------------------------------VRETLSLGIAYSVFSLLTRVTWL 199 (699)
Q Consensus 173 ~~----------------~~-------------------------------------~~~~~sval~LaLa~yl~r~~~w 199 (699)
.- +. .++..+++.++..++.+++..-+
T Consensus 82 Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~~~ 161 (417)
T 1fno_A 82 SPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNPIP 161 (417)
T ss_dssp CTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSSCC
T ss_pred cCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCCCC
Confidence 31 10 11115788889999999876556
Q ss_pred ccceEEEeeCCCCCCchhHHHHH
Q 005387 200 AKDIIWLVADSQYGEYAPVAAWL 222 (699)
Q Consensus 200 AKDIIfl~~D~~~g~~~G~~AWL 222 (699)
.+||.|+|+-+++.. .|.++.+
T Consensus 162 ~~~v~~~~~~~EE~g-~Ga~~~~ 183 (417)
T 1fno_A 162 HGDIKVAFTPDEEVG-KGAKHFD 183 (417)
T ss_dssp CCCEEEEEESCGGGT-CTTTTCC
T ss_pred CCcEEEEEEeccccC-CChhhhc
Confidence 789999997443322 4555444
No 48
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=92.50 E-value=1.4 Score=48.07 Aligned_cols=145 Identities=10% Similarity=0.028 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcc-----------cccCCCCCccccCC
Q 005387 72 SEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLH-----------FFSGPDSGVMQENS 140 (699)
Q Consensus 72 ~~a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~-----------~f~~~~~~~~~~~~ 140 (699)
.+..+++++|.+...-+... ....++|.++|+++|+++.+..-.....++..++ .+. +..+ +..
T Consensus 14 ~~~~~~~~~lh~~Pe~~~~E-~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~--~~~ 88 (445)
T 3io1_A 14 PSMTQWRRDFHLHAESGWLE-FRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERARE--QGAP--ERW 88 (445)
T ss_dssp HHHHHHHHHHHHTCCCTTCC-HHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHT--TTCC--TTT
T ss_pred HHHHHHHHHHHhCCCCCCcH-HHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcc--cccc--ccc
Confidence 34566777777776654432 3568999999999999987542000000000000 000 0000 000
Q ss_pred cccc--ccceEEEEEcCCCCCCceeEEEEEeeccCCCC----------------cc-c-------hhhHHHHHHHHHHHh
Q 005387 141 TRSL--YGINTVGIIRAPRGDGKEAIVLVTPYNAVKGG----------------VR-E-------TLSLGIAYSVFSLLT 194 (699)
Q Consensus 141 ~~~~--~G~NvygIlrAPRgdgtEaiVL~ap~~~~~~~----------------~~-~-------~~sval~LaLa~yl~ 194 (699)
.... .++|++|.++..+ +...|+|.+.+|..-.. .+ . ...++.+|+.++.++
T Consensus 89 ~~~~~~~~~~vva~~~~~~--~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa~~L~ 166 (445)
T 3io1_A 89 LPAFEGGFAGVVATLDTGR--PGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLK 166 (445)
T ss_dssp GGGGTTTCCCEEEEEECSS--CCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHHHHHHH
T ss_pred cccccCCCCEEEEEEeCCC--CCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHHHHHH
Confidence 0011 3589999998643 22689999988753210 00 0 124777888899998
Q ss_pred cCC-ccccceEEEeeCCCCCCchhHHHHHHH
Q 005387 195 RVT-WLAKDIIWLVADSQYGEYAPVAAWLRD 224 (699)
Q Consensus 195 r~~-~wAKDIIfl~~D~~~g~~~G~~AWL~a 224 (699)
+.. -+..+|.|+|+-++++ ..|.++.+++
T Consensus 167 ~~~~~~~g~v~l~f~p~EE~-~~Ga~~~i~~ 196 (445)
T 3io1_A 167 QYAAQLNGVIKLIFQPAEEG-TRGARAMVAA 196 (445)
T ss_dssp HTGGGCCSEEEEEEESCTTT-TCHHHHHHHT
T ss_pred hCcCcCCceEEEEEeccccc-cchHHHHHHc
Confidence 653 4789999999744443 3689988886
No 49
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=91.01 E-value=0.53 Score=49.74 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=26.4
Q ss_pred ccchhhHHHHHHHHHHHhcCCc-cccceEEEeeCCC
Q 005387 177 VRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQ 211 (699)
Q Consensus 177 ~~~~~sval~LaLa~yl~r~~~-wAKDIIfl~~D~~ 211 (699)
.++..+++.++..++.+++... ..++|.|+++.++
T Consensus 185 ~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 220 (349)
T 2gre_A 185 LDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNE 220 (349)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC
T ss_pred ccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcc
Confidence 3446788989999999876543 4689999998654
No 50
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=90.70 E-value=0.51 Score=49.64 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=29.5
Q ss_pred chhhHHHHHHHHHHHhcCCccccceEEEeeCCCCCCchhHHHHHHHh
Q 005387 179 ETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (699)
Q Consensus 179 ~~~sval~LaLa~yl~r~~~wAKDIIfl~~D~~~g~~~G~~AWL~aY 225 (699)
+..+++.++..++.++ . ..+||+|+++.+++.+..|++..++..
T Consensus 168 ~k~g~a~~l~a~~~l~--~-~~~~i~~~~~~~EE~G~~G~~~~~~~~ 211 (340)
T 2fvg_A 168 DRAGCSVLIDVLESGV--S-PAYDTYFVFTVQEETGLRGSAVVVEQL 211 (340)
T ss_dssp HHHHHHHHHHHHHTCC--C-CSEEEEEEEECCCC-----CHHHHHHH
T ss_pred cHHHHHHHHHHHHHhh--c-cCCcEEEEEEcccccchhhhHHHhhcc
Confidence 3468888888888887 2 478999999876554457788777643
No 51
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=89.12 E-value=4.2 Score=42.41 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=25.5
Q ss_pred HHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceee
Q 005387 75 NKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNN 112 (699)
Q Consensus 75 ~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~ 112 (699)
.++.++|-+....++. ..+.+++|.++|+++|.++.+
T Consensus 20 ~~~l~~Lv~i~s~sg~-e~~v~~~l~~~l~~~g~~v~~ 56 (321)
T 3cpx_A 20 MQLLKELCSIHAPSGN-EEPLKDFILEYIRSNAGSWSY 56 (321)
T ss_dssp HHHHHHHHHSCCBTTC-CHHHHHHHHHHHHHHGGGSSS
T ss_pred HHHHHHHHcCCCCCCC-HHHHHHHHHHHHHhhCCeEEE
Confidence 3455666665543332 346799999999999998654
No 52
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=88.42 E-value=1.9 Score=45.59 Aligned_cols=113 Identities=11% Similarity=0.062 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhhhcCC--CC--CccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccce
Q 005387 73 EANKLIKELNNLHSNP--LG--ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGIN 148 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~--~~--~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~N 148 (699)
+..++.++|-+...-+ .. ...+..+||.++|+ |+++..+... ..+.|
T Consensus 10 ~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~---------------------------~~~~~ 60 (369)
T 2f7v_A 10 STLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHG---------------------------DGAVS 60 (369)
T ss_dssp HHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECS---------------------------TTCEE
T ss_pred HHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcC---------------------------CCceE
Confidence 4456666676665543 20 23467899999998 9987654310 13579
Q ss_pred EEEEEcCCCCCCceeEEEEEeeccCCCC----------------------ccchhhHHHHHHHHHHHhcCCccccceEEE
Q 005387 149 TVGIIRAPRGDGKEAIVLVTPYNAVKGG----------------------VRETLSLGIAYSVFSLLTRVTWLAKDIIWL 206 (699)
Q Consensus 149 vygIlrAPRgdgtEaiVL~ap~~~~~~~----------------------~~~~~sval~LaLa~yl~r~~~wAKDIIfl 206 (699)
+++ ++.. ..|++.+.+|..... .+...+++.+|..++. +.++|.|+
T Consensus 61 ~~a-~~g~-----~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~------~~~~v~~~ 128 (369)
T 2f7v_A 61 LYA-VRGT-----PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA------GDGDAAFL 128 (369)
T ss_dssp EEE-EESC-----CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT------CCCCEEEE
T ss_pred EEE-EcCC-----CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc------CCCCEEEE
Confidence 999 7642 579999998753211 1113566666665544 68999999
Q ss_pred eeCCCCC-CchhHHHHHHHhc
Q 005387 207 VADSQYG-EYAPVAAWLRDYH 226 (699)
Q Consensus 207 ~~D~~~g-~~~G~~AWL~aYH 226 (699)
++-+++. ...|+++.+++..
T Consensus 129 ~~~~EE~~g~~G~~~~~~~~~ 149 (369)
T 2f7v_A 129 FSSDEEANDPRCIAAFLARGL 149 (369)
T ss_dssp EESCTTSSSCCHHHHHHTTCC
T ss_pred EEeCcccCCCcCHHHHHhcCC
Confidence 9744443 5579999887654
No 53
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=76.09 E-value=5.2 Score=39.77 Aligned_cols=62 Identities=13% Similarity=0.209 Sum_probs=42.1
Q ss_pred HHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEEcC
Q 005387 76 KLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRA 155 (699)
Q Consensus 76 ~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIlrA 155 (699)
++.++|-+...-++....+.+++|.++|+++|+|+.+. ..| ||+|.++.
T Consensus 13 elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D------------------------------~~G-Nlia~~~g 61 (354)
T 2wzn_A 13 KLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD------------------------------KLG-NVIAHFKG 61 (354)
T ss_dssp HHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEEC------------------------------TTC-CEEEEECC
T ss_pred HHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEe------------------------------CCC-eEEEEECC
Confidence 34566666555443222246899999999999988631 123 89998863
Q ss_pred CCCCCceeEEEEEeecc
Q 005387 156 PRGDGKEAIVLVTPYNA 172 (699)
Q Consensus 156 PRgdgtEaiVL~ap~~~ 172 (699)
+...++|.++.|+
T Consensus 62 ----~~p~lll~~H~Dt 74 (354)
T 2wzn_A 62 ----SSPRIMVAAHMDK 74 (354)
T ss_dssp ----SSSEEEEEEECCB
T ss_pred ----CCceEEEEecccc
Confidence 3457999998876
No 54
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=42.69 E-value=50 Score=35.00 Aligned_cols=67 Identities=13% Similarity=0.131 Sum_probs=46.7
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
..++.++|-+...-++. +.+.++++.++++++|.|+.+. ..| |+++.+
T Consensus 5 ~~~~l~~L~~ips~SG~-E~~v~~~l~~~l~~~g~~~~~D------------------------------~~G-Nli~~~ 52 (355)
T 3kl9_A 5 LFSKIKEVTELAAVSGH-EAPVRAYLREKLTPHVDEVVTD------------------------------GLG-GIFGIK 52 (355)
T ss_dssp HHHHHHHHHTSCCBTTC-CHHHHHHHHHHHGGGSSEEEEC------------------------------TTS-CEEEEE
T ss_pred HHHHHHHHHhCCCCCCC-HHHHHHHHHHHHHHhCCEEEEC------------------------------CCC-eEEEEE
Confidence 34667777776654433 4578999999999999887631 123 899998
Q ss_pred cCCCCCCceeEEEEEeeccC
Q 005387 154 RAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~ 173 (699)
++... +...++|.++.|..
T Consensus 53 ~g~~~-~~~~v~l~aHmD~V 71 (355)
T 3kl9_A 53 HSEAV-DAPRVLVASHMDEV 71 (355)
T ss_dssp CCCST-TCCEEEEEEECCBC
T ss_pred CCcCC-CCCeEEEEeccccc
Confidence 75321 34589999988764
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=33.86 E-value=67 Score=33.94 Aligned_cols=64 Identities=16% Similarity=0.186 Sum_probs=44.8
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
.+.+.++|.+...-++. +++.++++.++++++|.|+.+-+ .| |+++..
T Consensus 13 ~~~~l~~L~~~pspSG~-E~~v~~~i~~~l~~~~~e~~~D~------------------------------~G-nvi~~~ 60 (343)
T 3isx_A 13 MKELIRKLTEAFGPSGR-EEEVRSIILEELEGHIDGHRIDG------------------------------LG-NLIVWK 60 (343)
T ss_dssp CHHHHHHHHHSCCBTTC-CHHHHHHHHHHHTTTCSEEEECT------------------------------TC-CEEEEE
T ss_pred HHHHHHHHHhCCCCCCc-hHHHHHHHHHHHHHhCCEEEECC------------------------------CC-CEEEEE
Confidence 35566777666654443 45789999999999998876421 23 889887
Q ss_pred cCCCCCCceeEEEEEeeccC
Q 005387 154 RAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~ 173 (699)
. + +...++|.+..|..
T Consensus 61 g---~-~~~~v~l~aHmDev 76 (343)
T 3isx_A 61 G---S-GEKKVILDAHIDEI 76 (343)
T ss_dssp C---C-CSSEEEEEEECCBC
T ss_pred C---C-CCCEEEEEeccccc
Confidence 2 2 45689999988763
No 56
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=33.56 E-value=67 Score=34.04 Aligned_cols=63 Identities=13% Similarity=0.220 Sum_probs=45.1
Q ss_pred HHHHHHHHhhhcCCCCCcc-chHHHHHHHHHHcCCceeeeccccCCccCCCcccccCCCCCccccCCccccccceEEEEE
Q 005387 75 NKLIKELNNLHSNPLGATT-ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (699)
Q Consensus 75 ~~y~~el~~~~~~~~~~~~-~~~~~l~~~l~~lGle~~~q~f~~~~~~f~~l~~f~~~~~~~~~~~~~~~~~G~NvygIl 153 (699)
.++.++|-+...-++ .+. +.++++.++++++|.|+.+. ..| |+++.+
T Consensus 12 ~~~l~~L~~ipspSG-~E~~~v~~~l~~~l~~~g~~~~~D------------------------------~~G-Nvi~~~ 59 (354)
T 2vpu_A 12 WKLMQEIIEAPGVSG-YEHLGIRDIVVDVLKEVADEVKVD------------------------------KLG-NVIAHF 59 (354)
T ss_dssp HHHHHHHHHSCCBTT-CGGGTHHHHHHHHHHTTCSEEEEC------------------------------TTC-CEEEEE
T ss_pred HHHHHHHHhCCCCCc-ccHHHHHHHHHHHHHHhCCEEEEc------------------------------CCC-eEEEEE
Confidence 456677777665443 345 78999999999999887632 123 899988
Q ss_pred cCCCCCCceeEEEEEeeccC
Q 005387 154 RAPRGDGKEAIVLVTPYNAV 173 (699)
Q Consensus 154 rAPRgdgtEaiVL~ap~~~~ 173 (699)
++. + ..++|.++.|..
T Consensus 60 ~g~---~-~~v~l~aHmDtV 75 (354)
T 2vpu_A 60 KGS---S-PRIMVAAHMDKI 75 (354)
T ss_dssp CCS---S-SEEEEECCCCBC
T ss_pred cCC---C-CEEEEEeccccc
Confidence 652 3 689999988764
No 57
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=23.42 E-value=51 Score=35.43 Aligned_cols=45 Identities=13% Similarity=0.104 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhhhcCCCCC-ccchHHHHHHHHHHcCCceeeecccc
Q 005387 73 EANKLIKELNNLHSNPLGA-TTESHGIIAKYMSNLGAQVNNHKFHP 117 (699)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~-~~~~~~~l~~~l~~lGle~~~q~f~~ 117 (699)
.+++..+.|.......++. .....+||.++|+++|++++.|.|..
T Consensus 17 ~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~q~~~~ 62 (421)
T 2ek8_A 17 NMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEVQPFQF 62 (421)
T ss_dssp HHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEEEEEEe
Confidence 4556666666442222221 12458999999999999999999863
Done!