Query 005396
Match_columns 698
No_of_seqs 307 out of 867
Neff 8.6
Searched_HMMs 29240
Date Tue Mar 26 00:10:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005396.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005396hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rip_A Gamma-tubulin complex c 100.0 6.6E-92 2.3E-96 814.4 53.3 584 57-697 1-651 (677)
2 2jxc_B Stonin-2, stoned B; end 74.6 4.2 0.00014 27.0 3.9 37 3-54 6-42 (45)
3 3t98_B Nucleoporin NUP58/NUP45 38.8 1.5E+02 0.0052 23.9 8.2 55 133-187 6-64 (93)
4 2wx4_A DCP1, decapping protein 16.2 1E+02 0.0035 21.2 2.6 19 561-579 25-43 (46)
5 2wx3_A MRNA-decapping enzyme 1 14.5 1.5E+02 0.0051 20.9 3.1 18 561-578 27-44 (51)
6 1w53_A Phosphoserine phosphata 14.1 3.4E+02 0.012 21.4 5.6 43 556-602 38-81 (84)
7 3obv_E Protein diaphanous homo 13.1 1E+03 0.034 25.0 10.9 89 102-190 202-304 (457)
8 2j6y_A Phosphoserine phosphata 12.6 6E+02 0.02 21.1 7.0 47 556-606 38-85 (111)
9 4e17_B Catenin alpha-1; four h 11.2 2E+02 0.0068 19.2 2.8 16 137-152 21-36 (40)
10 3ljm_A Coil Ser L9C; de novo d 8.9 3.6E+02 0.012 16.1 3.1 22 139-160 8-29 (31)
No 1
>3rip_A Gamma-tubulin complex component 4; helix bundles, gamma-tubulin ring complex, gamma-TURC, struc protein; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.6e-92 Score=814.36 Aligned_cols=584 Identities=22% Similarity=0.363 Sum_probs=481.9
Q ss_pred HHHHHHHHhcCCCCCceeeecccccCCCCCCCCCccceEecC---CCCHhHHHHHHHHHHHHhHHHHHHHHHhhhcCC--
Q 005396 57 VIDDLLSALVGIEGRYISIKRRVNHVHGNDTYDSTVTFQVDA---SMDLALQEMAKRIFPLCESFVLTGQFVESRSQF-- 131 (698)
Q Consensus 57 lv~dLL~~L~G~~g~~~~~~~~~~~~~~~~~~~~~~~f~i~~---~~~~sl~~l~~~il~lg~~~~~l~~fv~~~~~~-- 131 (698)
||+|||++|+|++|.||++++ ..+|+|++ .+++|+++++++++++|.+|++|++|++..+..
T Consensus 1 Ml~dlL~~L~G~~g~~i~~~~-------------~~~f~v~~~~~~l~~s~r~ll~~l~~lg~~y~~l~~fv~~~~~~~~ 67 (677)
T 3rip_A 1 MIHELLLALSGYPGSIFTWNK-------------RSGLQVSQDFPFLHPSETSVLNRLCRLGTDYIRFTEFIEQYTGHVQ 67 (677)
T ss_dssp CHHHHHHHHTTCCCSSSEEET-------------TTEEECCSCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC--
T ss_pred ChHHHHHHHcCCCCCceEecC-------------CCceeeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 689999999999999999876 14688988 568999999999999999999999999964321
Q ss_pred -------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCCcHHHHHHhhhhHHHHHHHHHHHHHHhccCC
Q 005396 132 -------------KNGLVNHAFAASLRALLLDYEAMVAQLEHQFR-LGRLSIQGLWFYCQPMLGSMQAVSAVIHKASANN 197 (698)
Q Consensus 132 -------------~~g~v~~Al~~~l~~~L~~y~~~v~~lE~~~~-~~~lsL~~L~~~~~~~~~~l~~L~~i~~~~~~~~ 197 (698)
..|+|.+|||++|+++|++|+..|+++|+++. .+.+||+.++.+++|+...|+.|++|+.++..+.
T Consensus 68 ~~~~~~~~~~~~~~~g~v~~Al~~~i~~~L~~Y~~~i~~lE~~~l~~~~~sL~~l~~~l~~~~~~l~~L~~l~~~~~~~~ 147 (677)
T 3rip_A 68 QQDHHPSQQGQGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHLSISHVNYFLDQFQLLFPSVMVVVEQIKSQK 147 (677)
T ss_dssp -----------CCSCSHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHCTTCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 16999999999999999999999999999985 4679999999999999999999999999987667
Q ss_pred CcchhHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHHHHHHHhhceecCCCCcceEeeCCCccc----------c-
Q 005396 198 FTGSAVLNLLQSQAKAMAGDNTVRSLLEKMTQCASNAYLGILERWVYEGVIDDPYGEFFIAEDKSLLK----------D- 266 (698)
Q Consensus 198 ~~g~~lL~~L~~~~~~~~Gd~~~~~ll~~Ll~~~~~py~~~l~~Wi~~G~l~Dp~~EFfI~~~~~~~~----------d- 266 (698)
++||++|+.||+.+ .+|||.+++++.+|+.+|++||+++|..||.+|+|.|||+||||++++.... +
T Consensus 148 ~~G~~lL~~L~~~~--~~Gd~~~~~~~~~Ll~~~~~~~~~~L~~Wl~~G~L~Dp~~EFFI~~~~~~~~~~~~~~~~~~~~ 225 (677)
T 3rip_A 148 IHGCQILETVYKHS--CGGLPPVRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDL 225 (677)
T ss_dssp CCTHHHHHHHHHHH--HSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSCSSEEEC-----------------
T ss_pred CCHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeCCCcchheeEecccccccccccccccccc
Confidence 89999999999987 5999999999999999999999999999999999999999999998753210 0
Q ss_pred ----------------------cchhhhcccccc-ccCCChhhHH-HHHHHHhhhhHHHHHHHhCCCCC-----CCCccc
Q 005396 267 ----------------------YDAKYWRQRYSL-KDGIPSFLAN-IAGKILTTGKYLNVMRECGHSAQ-----VPTSEN 317 (698)
Q Consensus 267 ----------------------~~~~~W~~~y~l-~~~vP~Fl~~-~a~~Il~~GK~l~~Lr~~~~~~~-----~p~~e~ 317 (698)
....+|..+|+| .+++|+|+++ +|+|||.|||++|+||+|+.... ++..+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~e~~~~~~w~~~y~l~~~~lP~Fl~~~~A~kIl~~GKsln~lr~~~~~~~~~~~~~~~~~~ 305 (677)
T 3rip_A 226 GIGGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFENQNVNLTRKGSILKNQED 305 (677)
T ss_dssp ---------------------------CCCCEEECGGGSCTTSCHHHHHHHHHHHHHHHTCCC-CCSCC---CTTCSHHH
T ss_pred ccccccccccchhhhhhcccccccccchhcceeecHhhCcCccCHHHHHHHHHhhHHHHHHHccCCCCCcccccccchHH
Confidence 012479999999 6889999987 99999999999999999765421 000000
Q ss_pred c------ccccCC--CchhHHHHHHHHHHHHHHHHHHHHHhhhcHHHHHHHHhHhHhccCcchHHHHHHHHHHHHhcccc
Q 005396 318 S------KLLSFG--SNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLD 389 (698)
Q Consensus 318 ~------~~~~f~--~~~~~~~~I~~~~~~as~~Ll~ll~~~~~L~~~L~~l~~~fLL~~Gdf~~~f~~~~~~~L~~~~~ 389 (698)
. .+.... ....|...|+++|..||+.|+++++++++|.+||+++|+||||++|||+.+|++.++++|.+|+.
T Consensus 306 ~~~~~l~~L~~~~~~~~~~~e~~I~~~~~~as~~Ll~lL~~~~~L~~hL~~Lk~yfLL~~Gdf~~~f~~~~~~~L~~~~~ 385 (677)
T 3rip_A 306 TFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPT 385 (677)
T ss_dssp HHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcCCCc
Confidence 0 011110 12467889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHhhhcccCCCCCccceeeccccHHHHHHhhhccccccCCCCCCCCCCCCCcceeeEEeeeecCCC
Q 005396 390 EITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWP 469 (698)
Q Consensus 390 ~~~~~~L~~~l~~al~~s~~~~d~~~~~l~~~l~~~~l~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~d~l~L~Y~v~wP 469 (698)
+++..+|+..|+.|++.+....+++.+.+.+.+........ ..-...+ ..+ ......+.+..|||+|+|+|+||||
T Consensus 386 ~~~~~~L~~~L~~a~~~~~~~~~~~~~~L~~~i~~~~~~~~-~~~~~~~--~~~-~~~~~~~~~~~~~d~l~L~Y~v~~P 461 (677)
T 3rip_A 386 AVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKEHK-DATQARE--GPS-RETSPREAPASGWAALGLSYKVQWP 461 (677)
T ss_dssp TTHHHHHHHHHHHHHHHTTCCCTTTGGGEEEEECCCC---------------------------CCTTTTEEEEECCCTT
T ss_pred ccCHHHHHHHHHHHHHHccCCchhhHhcceEEeeccccccc-ccccccc--ccc-cccccccCCccchheEEEEEeCCCh
Confidence 99999999999999998766666666677666554321100 0000000 000 0011223457899999999999999
Q ss_pred cceeeChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCchhhHHhHHHHHHHHHHHHHHHHHHHHHHhccccH
Q 005396 470 LSIVISRKALTKYQMVFRLLFHCKHVERQLCGAWQVHQGARAFNASGTAISRSSLLCRSMLKFINSLLHYLTFEVLEPNW 549 (698)
Q Consensus 470 L~lIit~~~l~~Y~~IFr~Ll~lk~~~~~L~~~w~~~~~~r~~~~~~~~~~~~~~lr~~m~~Fv~~l~~Y~~~~VIe~~w 549 (698)
|++|||+++|.+|++||+|||++||+++.|+++|+.++..|........+++ +.+|++|+|||+++++|++++||+++|
T Consensus 462 L~liit~~~l~~Y~~iF~~Ll~lkr~~~~L~~~w~~~~~~~~~~~~~~~~~~-~~lr~~m~~Fv~~l~~Y~~~~Vie~~w 540 (677)
T 3rip_A 462 LHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAIK-WRLRNHMAFLVDNLQYYLQVDVLESQF 540 (677)
T ss_dssp GGGTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSGGGCCSSHHHHHH-HHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987755433222223444 899999999999999999999999999
Q ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCChh
Q 005396 550 HVMHNRLQTAKSIDEVIQHHDFFLDKCLRECLLHLPDLLKKVERLKSLCLQYAAATQWLISSSIDLPKLEEPSDGFSGSE 629 (698)
Q Consensus 550 ~~~~~~l~~a~~~d~l~~~H~~fL~~i~~~c~L~~~~l~~~l~~il~~c~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (698)
.+|++++++++|+|+|+++|++||++|+++|||+++++.+++.+|+++|++||..+++.. . ..
T Consensus 541 ~~~~~~l~~~~~~d~l~~~H~~~L~~i~~~c~L~~~~v~~~l~~il~~~~~F~~~~~~~~------~--~~--------- 603 (677)
T 3rip_A 541 SQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVSQNL------G--PL--------- 603 (677)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCC----------C---------
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHHhhc------c--cc---------
Confidence 999999999999999999999999999999999999999999999999999999986421 0 00
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHhhccccccchHHHHHHHHhccCCC
Q 005396 630 KFKRLKLRSLSQVQKVMIRDATVTESILKFEREFNNELQSLGPILSSSSQAEPYLTHLAQLVLGVGFD 697 (698)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~F~~~~~~l~~~L~~~~~~~~~~~~L~~ll~rld~n 697 (698)
.+...+++.+++++|++++..|+++|++++ +.++.++|++||+|||||
T Consensus 604 -------------------~~~~~~~~~~l~~~F~~~~~~L~~~l~~l~-~~~~~~~l~~Ll~rLd~N 651 (677)
T 3rip_A 604 -------------------DERGAAQLSILVKGFSRQSSLLFKILSSVR-NHQINSDLAQLLLRLDYN 651 (677)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTSCCHHHHHHHHHHHHH
T ss_pred -------------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCchHHHHHHHHhCch
Confidence 111246899999999999999999999984 456779999999999998
No 2
>2jxc_B Stonin-2, stoned B; endocytosis, calcium, chromosomal rearrangement, cytoplasm, membrane, phosphorylation, polymorphism, proto-oncogene; NMR {Homo sapiens}
Probab=74.57 E-value=4.2 Score=27.00 Aligned_cols=37 Identities=22% Similarity=0.358 Sum_probs=26.5
Q ss_pred CCCCCCCCCcccCCCcCCccccchhhhhhhccccccCcccccCCCCCccchH
Q 005396 3 MSYPSTPRWNIERPFLTGRFHQETKAASRFADSFSNNGAEMAIGCYDAGVQE 54 (698)
Q Consensus 3 ~~~p~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qE 54 (698)
.++|..|+|...-|||..++-. -.+.||.+++.-..|
T Consensus 6 p~~~e~~Pw~atNPFLde~l~d---------------vqPSPINPFsafFeE 42 (45)
T 2jxc_B 6 PSVTEASPWRATNPFLNETLQD---------------VQPSPINPFSAFFEE 42 (45)
T ss_dssp CCCSCCCCSCSSCSSSSTTTSC---------------CCCCTTCSCTTHHHH
T ss_pred CccccCCCcccCCcchhhhHHh---------------CCCCCCChHHHhhhh
Confidence 4678889999999999988722 224567777665444
No 3
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=38.85 E-value=1.5e+02 Score=23.87 Aligned_cols=55 Identities=15% Similarity=0.217 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----CCCcHHHHHHhhhhHHHHHHHHH
Q 005396 133 NGLVNHAFAASLRALLLDYEAMVAQLEHQFRL----GRLSIQGLWFYCQPMLGSMQAVS 187 (698)
Q Consensus 133 ~g~v~~Al~~~l~~~L~~y~~~v~~lE~~~~~----~~lsL~~L~~~~~~~~~~l~~L~ 187 (698)
+..+.+-++.-.++.|..|+..|.++|+.+.. ...|.+.|..-++.....+=.||
T Consensus 6 P~~yF~~lv~~fe~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~h~~FiaLA 64 (93)
T 3t98_B 6 PADYFRVLVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 64 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34577888999999999999999999987643 35666766655555544444444
No 4
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=16.18 E-value=1e+02 Score=21.25 Aligned_cols=19 Identities=16% Similarity=0.272 Sum_probs=11.4
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 005396 561 SIDEVIQHHDFFLDKCLRE 579 (698)
Q Consensus 561 ~~d~l~~~H~~fL~~i~~~ 579 (698)
|-+-+...|+.||..+.+.
T Consensus 25 D~~Fl~~iHeAYl~sl~~~ 43 (46)
T 2wx4_A 25 DKEFANKLHKAYLNGCSNL 43 (46)
T ss_dssp CTTHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 4566788999999988764
No 5
>2wx3_A MRNA-decapping enzyme 1A; structural protein, trimerization module, P-BODY component, asymmetric assembly; 2.31A {Homo sapiens}
Probab=14.51 E-value=1.5e+02 Score=20.93 Aligned_cols=18 Identities=11% Similarity=0.194 Sum_probs=13.8
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 005396 561 SIDEVIQHHDFFLDKCLR 578 (698)
Q Consensus 561 ~~d~l~~~H~~fL~~i~~ 578 (698)
|-+-+..+|+.||..+.+
T Consensus 27 D~~Fl~~IHeAYl~sl~~ 44 (51)
T 2wx3_A 27 DSSFLSTLHEVYLQVLTK 44 (51)
T ss_dssp CHHHHHHHHHHHHHTTC-
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 667788899999987654
No 6
>1w53_A Phosphoserine phosphatase RSBU; stress, kinase, hydrolase; 1.6A {Bacillus subtilis} SCOP: a.186.1.2
Probab=14.14 E-value=3.4e+02 Score=21.37 Aligned_cols=43 Identities=16% Similarity=0.281 Sum_probs=30.2
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHHHH
Q 005396 556 LQTAKSIDEVIQHHDFFLDKCLRECLLH-LPDLLKKVERLKSLCLQYA 602 (698)
Q Consensus 556 l~~a~~~d~l~~~H~~fL~~i~~~c~L~-~~~l~~~l~~il~~c~~F~ 602 (698)
+++.-..+|++..|.+++..+ .++ ...+...++=++.+..-|.
T Consensus 38 iek~i~PEeiV~iHk~~i~el----~~~l~e~v~~Sfd~L~Evm~gyG 81 (84)
T 1w53_A 38 IEHQIPPEEIISIHRKVLKEL----YPSLPEDVFHSLDFLIEVMIGYG 81 (84)
T ss_dssp HHTTCCHHHHHHHHHHHHHHH----CTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHh----cCCChHHHHHHHHHHHHHHHHhC
Confidence 355678999999999887665 444 5667777766666665543
No 7
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=13.09 E-value=1e+03 Score=25.02 Aligned_cols=89 Identities=11% Similarity=0.037 Sum_probs=42.7
Q ss_pred HhHHHHHHHHHHHHhHHHH--------------HHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 005396 102 LALQEMAKRIFPLCESFVL--------------TGQFVESRSQFKNGLVNHAFAASLRALLLDYEAMVAQLEHQFRLGRL 167 (698)
Q Consensus 102 ~sl~~l~~~il~lg~~~~~--------------l~~fv~~~~~~~~g~v~~Al~~~l~~~L~~y~~~v~~lE~~~~~~~l 167 (698)
..++.++.-+|.+|++... |.+..+..+.......+|-++..+++---++..+...|.+--....+
T Consensus 202 ~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~sL~KL~d~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakv 281 (457)
T 3obv_E 202 ENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRV 281 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSTTCSCSCBCGGGHHHHTTCBCSSTTCBHHHHHHHHHHHHCGGGGGHHHHCTTHHHHTTC
T ss_pred HHHHHHHHHHHHHhhhhccCCcCCCeeeEehHHHHHHHhhhcCCCCccHHHHHHHHHHHcCccccCChhhhhhHHhhccC
Confidence 4556677777777776542 22222222221222445555555544322222222232221123577
Q ss_pred cHHHHHHhhhhHHHHHHHHHHHH
Q 005396 168 SIQGLWFYCQPMLGSMQAVSAVI 190 (698)
Q Consensus 168 sL~~L~~~~~~~~~~l~~L~~i~ 190 (698)
++..|...+......+..+..-+
T Consensus 282 s~~~l~~dl~~L~~~l~~v~~~l 304 (457)
T 3obv_E 282 SAENLQKSLDQMKKQIADVERDV 304 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877766666555555554433
No 8
>2j6y_A Phosphoserine phosphatase RSBU; hydrolase, partner switching, protein phosphatase, RSBT, stress; 1.85A {Bacillus subtilis} PDB: 2j70_A 2j6z_A
Probab=12.63 E-value=6e+02 Score=21.10 Aligned_cols=47 Identities=19% Similarity=0.275 Sum_probs=36.6
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHHHHHHHH
Q 005396 556 LQTAKSIDEVIQHHDFFLDKCLRECLLH-LPDLLKKVERLKSLCLQYAAATQ 606 (698)
Q Consensus 556 l~~a~~~d~l~~~H~~fL~~i~~~c~L~-~~~l~~~l~~il~~c~~F~~~~~ 606 (698)
+++.-..+|++..|..++..+ ..+ ...+...++=++.+..-|.-.-+
T Consensus 38 iek~I~PEeiV~iHk~~i~~l----~~~l~e~v~~s~d~L~Evm~gyGlayr 85 (111)
T 2j6y_A 38 IEHQIPPEEIISIHRKVLKEL----YPSLPEDVFHSLDFLIEVMIGYGMAYQ 85 (111)
T ss_dssp HHTTCCHHHHHHHHHHHHHHH----CTTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHcCCCHHHHHHHHHHHHHHh----CCCChHHHHHHHHHHHHHHHHHhHhHH
Confidence 455678999999999999887 565 56788888888888888876543
No 9
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=11.17 E-value=2e+02 Score=19.20 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHH
Q 005396 137 NHAFAASLRALLLDYE 152 (698)
Q Consensus 137 ~~Al~~~l~~~L~~y~ 152 (698)
+.|+-.|++.+|.+|.
T Consensus 21 CnavrqALQdLlseY~ 36 (40)
T 4e17_B 21 CNAVRQALQDLLSEYM 36 (40)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4466666667777775
No 10
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=8.94 E-value=3.6e+02 Score=16.10 Aligned_cols=22 Identities=32% Similarity=0.347 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 005396 139 AFAASLRALLLDYEAMVAQLEH 160 (698)
Q Consensus 139 Al~~~l~~~L~~y~~~v~~lE~ 160 (698)
-=|+++..-|+.....+..+|+
T Consensus 8 kkcaalesklqalekklealeh 29 (31)
T 3ljm_A 8 KKCAALESKLQALEKKLEALEH 29 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3477777777777776666664
Done!