Query 005397
Match_columns 698
No_of_seqs 137 out of 163
Neff 5.6
Searched_HMMs 46136
Date Thu Mar 28 22:48:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005397.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005397hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2215 Exocyst complex subuni 100.0 9.2E-71 2E-75 621.0 33.0 658 5-696 3-668 (673)
2 KOG2215 Exocyst complex subuni 99.8 7.9E-19 1.7E-23 200.2 22.0 301 131-452 283-608 (673)
3 PF08700 Vps51: Vps51/Vps67; 99.6 1.7E-15 3.7E-20 132.5 11.9 85 11-95 1-86 (87)
4 PF04124 Dor1: Dor1-like famil 99.4 3.1E-10 6.7E-15 123.2 28.9 308 32-364 10-335 (338)
5 PF06248 Zw10: Centromere/kine 98.6 0.0013 2.8E-08 76.9 44.6 429 30-494 8-530 (593)
6 KOG2346 Uncharacterized conser 98.5 1.3E-05 2.9E-10 88.9 20.6 207 11-237 28-242 (636)
7 KOG2069 Golgi transport comple 98.3 0.0044 9.6E-08 70.8 37.0 330 17-373 20-368 (581)
8 PF10191 COG7: Golgi complex c 98.3 0.00054 1.2E-08 82.4 30.2 416 7-450 1-442 (766)
9 PF10475 DUF2450: Protein of u 97.7 0.0088 1.9E-07 64.1 23.0 220 10-246 7-235 (291)
10 PF15469 Sec5: Exocyst complex 97.0 0.022 4.8E-07 56.6 15.3 173 49-234 2-181 (182)
11 PF04100 Vps53_N: Vps53-like, 96.7 1.5 3.2E-05 49.2 35.7 336 14-378 2-383 (383)
12 PF06148 COG2: COG (conserved 96.4 0.0019 4.2E-08 61.2 2.6 83 9-94 6-89 (133)
13 PF04437 RINT1_TIP1: RINT-1 / 95.9 1.9 4.1E-05 49.7 23.7 362 263-668 31-431 (494)
14 KOG2033 Low density lipoprotei 95.5 5 0.00011 47.6 24.8 265 22-309 10-308 (863)
15 KOG2347 Sec5 subunit of exocys 95.1 11 0.00025 45.8 41.8 608 11-674 166-888 (934)
16 PF10392 COG5: Golgi transport 95.0 0.3 6.5E-06 46.5 11.4 85 10-94 2-92 (132)
17 KOG2307 Low density lipoprotei 93.1 13 0.00029 43.3 20.9 74 9-85 26-100 (705)
18 PF04091 Sec15: Exocyst comple 89.7 18 0.00038 39.5 17.3 99 579-685 177-286 (311)
19 KOG3691 Exocyst complex subuni 89.4 15 0.00033 44.8 17.4 161 23-203 37-206 (982)
20 PF06046 Sec6: Exocyst complex 82.8 72 0.0016 37.2 18.7 380 226-659 77-472 (566)
21 PF04048 Sec8_exocyst: Sec8 ex 81.1 14 0.0003 35.7 10.0 82 10-92 15-104 (142)
22 KOG4182 Uncharacterized conser 78.5 1.4E+02 0.003 34.7 29.0 409 7-449 2-501 (828)
23 PF05664 DUF810: Protein of un 78.3 20 0.00043 43.3 12.1 96 343-451 510-608 (677)
24 PF04305 DUF455: Protein of un 69.5 29 0.00063 36.9 9.5 122 256-381 69-207 (253)
25 PF03081 Exo70: Exo70 exocyst 66.3 1.8E+02 0.004 31.8 15.5 32 395-426 138-169 (371)
26 PF01031 Dynamin_M: Dynamin ce 64.6 84 0.0018 33.6 12.1 168 210-381 88-275 (295)
27 PRK15380 pathogenicity island 59.2 7.3 0.00016 41.2 2.7 60 532-602 36-100 (319)
28 PF07393 Sec10: Exocyst comple 53.9 4.8E+02 0.01 31.7 39.0 181 152-338 75-274 (710)
29 PF08631 SPO22: Meiosis protei 48.4 2.5E+02 0.0055 29.7 12.4 179 145-353 3-191 (278)
30 KOG2180 Late Golgi protein sor 45.7 6.6E+02 0.014 30.9 27.2 415 9-452 12-466 (793)
31 PF03915 AIP3: Actin interacti 45.2 1.6E+02 0.0034 33.9 10.5 59 31-89 212-275 (424)
32 smart00806 AIP3 Actin interact 44.0 1.4E+02 0.003 34.2 9.7 66 19-85 205-275 (426)
33 PF04420 CHD5: CHD5-like prote 36.6 95 0.0021 30.7 6.4 65 30-97 38-103 (161)
34 PF04129 Vps52: Vps52 / Sac2 f 35.1 7.9E+02 0.017 28.7 40.3 74 18-97 6-79 (508)
35 COG2882 FliJ Flagellar biosynt 34.7 1.6E+02 0.0034 29.1 7.4 56 32-93 37-97 (148)
36 PF14733 ACDC: AP2-coincident 33.6 1.2E+02 0.0025 27.0 5.9 37 49-85 36-72 (91)
37 PF09976 TPR_21: Tetratricopep 33.1 1.2E+02 0.0026 28.5 6.3 23 143-165 56-78 (145)
38 COG2959 HemX Uncharacterized e 30.7 8.4E+02 0.018 27.7 15.3 113 33-188 64-184 (391)
39 PF11047 SopD: Salmonella oute 30.1 46 0.001 36.0 3.1 21 531-551 35-58 (319)
40 smart00762 Cog4 COG4 transport 29.8 2.4E+02 0.0051 31.0 8.7 69 208-277 25-99 (324)
41 PF12523 DUF3725: Protein of u 28.8 74 0.0016 27.3 3.5 54 643-698 9-62 (74)
42 KOG1488 Translational represso 28.6 7.2E+02 0.016 29.3 12.6 133 409-549 339-495 (503)
43 KOG2344 Exocyst component prot 27.8 1.2E+03 0.025 28.4 17.7 44 207-250 191-234 (623)
44 KOG2163 Centromere/kinetochore 27.5 1.2E+03 0.026 28.4 14.3 76 396-487 432-508 (719)
45 PF09730 BicD: Microtubule-ass 24.7 1.2E+03 0.025 28.9 13.8 74 12-85 244-318 (717)
46 PF12998 ING: Inhibitor of gro 24.2 5E+02 0.011 22.9 9.2 77 21-97 2-91 (105)
47 PF06295 DUF1043: Protein of u 23.1 6.5E+02 0.014 23.9 9.5 58 29-89 22-79 (128)
48 KOG3745 Exocyst subunit - Sec1 22.5 1.5E+03 0.033 28.0 27.6 85 319-418 271-355 (763)
49 PRK15179 Vi polysaccharide bio 21.8 3.2E+02 0.0069 33.4 8.5 19 216-234 196-214 (694)
50 PF08647 BRE1: BRE1 E3 ubiquit 21.0 5.6E+02 0.012 23.1 8.0 32 64-95 49-80 (96)
51 COG2433 Uncharacterized conser 20.2 5.1E+02 0.011 31.2 9.2 66 32-97 436-504 (652)
No 1
>KOG2215 consensus Exocyst complex subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.2e-71 Score=621.02 Aligned_cols=658 Identities=29% Similarity=0.354 Sum_probs=582.9
Q ss_pred cccCCCCCCCCCChhhhHHHhhccCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 5 EEDDDFPSIESITPQSKIDSVYQSHTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHI 83 (698)
Q Consensus 5 ~~~~~~f~~~~Fdp~~Yv~~~~~~~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lL 83 (698)
+++...|..+.|+|++|++++++ .++++|+++|+++.+++ ++++.||++|+.||.+||++||||++||.||++++|++
T Consensus 3 ~~~~s~f~~~~~t~~~~i~~~~~-~~e~dl~~~~~~~~~l~~as~e~~r~~~~~ny~~fI~~skEi~~le~el~~l~~~l 81 (673)
T KOG2215|consen 3 EDDDSSFEDEKITPSSYIPSKSK-KKESDLQQLCSELVALNKASAETLRQKVSMNYKAFIRTSKEISDLEMELYQLPKFL 81 (673)
T ss_pred CCccccCcccccCccccccchhh-hhhhhHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHhcCcccccccchHHHhHHhh
Confidence 56778899999999999999999 88999999999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhcCCCcccccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHh
Q 005397 84 SAQGILVQDLMTGVCRQLEELSVANGNIDESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEER 163 (698)
Q Consensus 84 seQ~~lv~~L~~~~~s~~~~w~~~~~~~~~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~ 163 (698)
++|+++++++..|+......|.+..+..... .. ..+.+.+....+|+.+|++.+|-+.+++ .|+|+..++-.+.
T Consensus 82 ~~Q~~~~~~l~~~~~~d~~~~~s~~s~sn~~---~~--~~~~~l~~~~~~~~~~fl~~l~~~~~~~-~dg~l~~~D~~~~ 155 (673)
T KOG2215|consen 82 IEQNNVIQSLLNGVLQDLSEDESLESLSNTL---LS--LEDIHLGDVVKNLVKGFLKNLNTLLFES-VDGALEAFDFEKF 155 (673)
T ss_pred hhccchHHHhhccccccccccccccccCCcc---cc--ccCCchhHHHHHHHHHHHHhhhhhhhcc-chHHHhhcchhhh
Confidence 9999999999999977666555322221110 11 1122223246799999999999999999 9999999988764
Q ss_pred hccccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHhh
Q 005397 164 NFPELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKITEQPSIGILELKKALTDLIKLGKGPLAHQLLLKYYASRLQRSF 243 (698)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~~~~~s~~~~~~rravs~L~RLG~~~~A~~lfL~~rs~~I~~~~ 243 (698)
....-......+. .++..+-++++|..+|++.+.+...+++.+..+.+.++-.|++||.++.++.+.++.+...+...+
T Consensus 156 ~~~q~~~~~~~~~-~L~~~~~~~~~r~~~l~d~~~~~a~~~~~~~~e~~~a~~~li~l~~~~~~~~i~~~~~~~~~~~~~ 234 (673)
T KOG2215|consen 156 LPSQKTLKTDFSH-DLNSVKITHDKRKESLTDLSLRLAAQINIKDEESWEAQLNLIRLGYSRMYHNILAQRPTLWVNMLI 234 (673)
T ss_pred ccchHHHHHHHHh-hhhhhhhhhchhhhHHHHHHHHHhhccccchHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHH
Confidence 3321111111111 266778889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCccccchhhHHHhhhHHHHHHHHHhhhCCC--CCchhHHHHHHHHHHHHHHHHHHhhC-CCCcchhhhHH
Q 005397 244 EVYLPSSSVCPEVFPATISKLVFSTVSLTTKDSGLIFGDN--PVYSNRVVQWAEWEIEYFVRLVKENA-PPSETISAMRA 320 (698)
Q Consensus 244 R~lr~eg~~~g~~YI~~LS~v~Ft~I~~ta~ef~~~F~~~--~~~~S~~V~WA~~Ele~Fa~l~~Rqv-~ss~~~~~l~~ 320 (698)
...|+.+..++..|-+.++.+.|..+..+..+-...|++. |+|...-|.|+.++++.|-..+..|+ ..+..+..++.
T Consensus 235 ea~R~~l~~~~~~~qa~~~~~~~~~~S~A~~e~~~~~~~e~~~s~~~~~~~W~~~~~e~~~~~v~~~~~~~s~~~~~l~~ 314 (673)
T KOG2215|consen 235 QAKRLSLQTSPMERQATFPKLRFSAISWALTESLISFGEENLPSYSDEEVLWLEELVELFKLLVAHNAFKTSLEAIHLRA 314 (673)
T ss_pred HHHHHHHhhCccccccccchHHHhcCCcccCcccccccCCCCcccchhhhchhhhhhHHHHHHHHhccchhhHHHHHhhh
Confidence 9999999988888999999999999999999999999987 89999999999999999999999999 55566778999
Q ss_pred HHHHHHHHHHHHhhHHhcCCCcHHHHHHhhhHhHHHHHHHHHHHHHHHHhhhhhcCCccccCCCCCCCCcccCCCCceec
Q 005397 321 ASISVEASVNYCSLLESQGLKLSRLLLLLLRPYIEEVLELNFRRARKMVFNLEDIDESLLLSPHFMSPLSLFATSSDSML 400 (698)
Q Consensus 321 ~aeCv~ia~~hc~~L~e~GLdl~flL~~lLrp~ve~aL~~~~~ri~e~i~~~~~~D~W~~~~~~~~~~~s~~~~~~~~~L 400 (698)
.+.|++.+..||..|+.+||-+..++..++. ++++++.++++.+......+.-++|.....+...+.+.......++.
T Consensus 315 ~~~~~~~~~~~~~~Lq~~~lfl~~~ll~~~~--~~~~le~~~r~~~~~~~~l~el~~~~~at~~~l~~~s~~~~a~~~~~ 392 (673)
T KOG2215|consen 315 ASACLQLALTICKPLQMRELFLLNLLLKIFS--VERALERDFRVAQRRHHQLVELGRWSRSTKRLLFKHSESLSAYRCRD 392 (673)
T ss_pred cccchhhhhhhhhhhhHhHhhhhhHHHHHhh--hhhhhhhhHHHHhhhHHHHHHhhhhcccchHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999998 99999999999999999999999999764444433332233445799
Q ss_pred chhHHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHhCCCCCCCccccccccCcccc-cCChHHHhHHH
Q 005397 401 VDSGSRFMHIVEEILEQLTPLVVLHFGGNILTRISQLFDKYLDALNRALPGPSDDDNLTELKETIPFR-AETDSEQLSLL 479 (698)
Q Consensus 401 T~S~~~F~~~vq~fled~~~L~~~~L~~~il~~l~~lF~~yv~~L~~al~~~~~~~~~~e~~~~~~~~-a~t~~qq~ail 479 (698)
|++.++|..++++|.+|++++.+.+.+..++..+.+.++.|++.+.+++|++.++++-.+..+..+++ |++..+|++.+
T Consensus 393 ~~~~~r~~~~~~d~~~~l~~~~~~e~~s~~~~~~~q~~~~~ldtl~~~l~~s~~e~~~~~s~~a~iv~~a~~~~~qL~~i 472 (673)
T KOG2215|consen 393 TDEASRFLQVVQDFSEDLCDILKFEQGSKCLYTSFQVLNKELDTLGRQLPRSYEEQGPARSMVAEIVKRAEHTSEQLTLI 472 (673)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHcccchhhcCchHHHHHHHHHHhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888777888888888 99999999999
Q ss_pred HHHHHHHhhhhhhhhhhhcCCCCCCcccccCCCCC---CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcc
Q 005397 480 GVAFTIMDELLPNTVSKVWNPKNESKEVGNENIAP---NASTTTELKDWKRHLQHSFDKLRDHFCRQYVLSFIYSREGKT 556 (698)
Q Consensus 480 ~Na~~l~d~Llp~~~~k~~~~~~~~~~~~~~~~~~---~~~~~~e~~e~~~~lq~~~~~lr~~fc~q~~~~~i~~~~~~~ 556 (698)
+++.++.++.||+...+-+.. .++..|++.. +.|+ |.++|++++-.+.++||+-||+++.+.++|.+.|.+
T Consensus 473 g~~lt~~~~~Llr~~le~s~~----l~~~~E~~~~ald~r~~--~ee~W~~~~L~t~s~Lk~l~ee~~~~gv~~~~~~~~ 546 (673)
T KOG2215|consen 473 GLDLTIRDEALLRSKLESSQL----LEGFKEGIADALDNRNR--EEESWVRYLLQTESALKDLSEELSDLGVIYLRQISH 546 (673)
T ss_pred HhhHHHHHHhhhhhhHHHhhh----hhcchhhHHHHHHhhhh--HHHHHHHHHHhhHHHHHHHHHHhhhhhhhhHhhhhc
Confidence 999999999999999887632 2233354322 4444 899999999999999999999999999999999988
Q ss_pred cccccccccCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCcchhhHhhhcC
Q 005397 557 RLNGQIYLSGNEEYTQWDSDPLPSLPFQALFAKLQQLATVAGDVLLGKEKLQKILLARLTETVVMWLSAEQEFWAVFEDE 636 (698)
Q Consensus 557 ~l~~~~y~~~~~~~~~~~~~~~Ps~~Fq~lf~~l~~la~~~~d~~~g~e~~~~~ll~rl~etvv~~ls~~~~fw~~~e~~ 636 (698)
++++++|+. ++||.+|.+.+.++.+++|+..||+++.++||++|+||+++|+ |+||-.++++
T Consensus 547 ~~e~d~~~n---------------l~~q~v~~~~~~~~~le~d~~l~k~~l~~~lLe~L~e~~~~~l---Q~l~~~~~~~ 608 (673)
T KOG2215|consen 547 ELEGDGWLN---------------LSSQLVVSKKQLMHLLEKDLPLGKLELAFQLLELLAETLSIAL---QSLWLKIDDE 608 (673)
T ss_pred ccccceEEe---------------hhHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHHH---HHHHhhhccc
Confidence 888888843 6799999999999999999999999999999999999999999 8999999999
Q ss_pred CCCCCccchhhhhhHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccc
Q 005397 637 SSPIQPLGLQQLILDMHFTVEIARFAGYPSRHVHQIASAIIARAIRTFSTRGIDPRYYSY 696 (698)
Q Consensus 637 ~~~~~~~glqq~~Ldm~f~~~~a~~g~y~s~~~~~~~~~~i~~a~~~~~~~g~dp~~~~~ 696 (698)
+.|.+|.|++|||+||.|.++++.++||+.+.++.+-+-.+.++.+.|+++|++|++..|
T Consensus 609 ~dP~~~~~~~q~i~~m~~~v~~~~~~~~~~~~~~~i~~~~~~~~~a~~~~~~v~~~s~l~ 668 (673)
T KOG2215|consen 609 ADPNIFAGIRQLILDMELPVCIAAFDRIEGELGSKIMQLNTLRAEAKFDAMGVNPQSDLP 668 (673)
T ss_pred cCcchHHHHHHHHHHhhhhhhHHHhhhhhHHhhhhhHHHHHHHHHhhcccccCCcccccc
Confidence 999999999999999999999999999999999999999999999999999999999765
No 2
>KOG2215 consensus Exocyst complex subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.81 E-value=7.9e-19 Score=200.20 Aligned_cols=301 Identities=15% Similarity=0.053 Sum_probs=251.6
Q ss_pred hhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhhccccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHHhcCCCC-Ch-
Q 005397 131 IDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERNFPELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKITEQPSI-GI- 208 (698)
Q Consensus 131 ~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~l~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~~~~~s~-~~- 208 (698)
..-|.++.++.++-+|++|.|+.+..++-...+-.. + +....+-..+.+|.-.|...|.....-+.. .+
T Consensus 283 ~~~W~~~~~e~~~~~v~~~~~~~s~~~~~l~~~~~~-~--------~~~~~~~~~Lq~~~lfl~~~ll~~~~~~~~le~~ 353 (673)
T KOG2215|consen 283 EVLWLEELVELFKLLVAHNAFKTSLEAIHLRAASAC-L--------QLALTICKPLQMRELFLLNLLLKIFSVERALERD 353 (673)
T ss_pred hhchhhhhhHHHHHHHHhccchhhHHHHHhhhcccc-h--------hhhhhhhhhhhHhHhhhhhHHHHHhhhhhhhhhh
Confidence 567999999999999999999999888766553221 1 112234445778888888888766552221 11
Q ss_pred -HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHhhhhcccCCCCCCccccchhhHHHhhhHHHHHHHHHhhhCCCCCch
Q 005397 209 -LELKKALTDLIKLGKGPLAHQLLLKYYASRLQRSFEVYLPSSSVCPEVFPATISKLVFSTVSLTTKDSGLIFGDNPVYS 287 (698)
Q Consensus 209 -~~~rravs~L~RLG~~~~A~~lfL~~rs~~I~~~~R~lr~eg~~~g~~YI~~LS~v~Ft~I~~ta~ef~~~F~~~~~~~ 287 (698)
...++....|+.||++.+|...||..|+..+ -++|....++. .....+++.+.+...++.+ |+..|.|.
T Consensus 354 ~r~~~~~~~~l~el~~~~~at~~~l~~~s~~~-~a~~~~~~~~~--------~r~~~~~~d~~~~l~~~~~-~e~~s~~~ 423 (673)
T KOG2215|consen 354 FRVAQRRHHQLVELGRWSRSTKRLLFKHSESL-SAYRCRDTDEA--------SRFLQVVQDFSEDLCDILK-FEQGSKCL 423 (673)
T ss_pred HHHHhhhHHHHHHhhhhcccchHHHHHHHHHH-HHHHhhhhhhh--------HHHHHHHHHHHHHHHHHhh-hccchHHH
Confidence 2677788999999999999999999999999 77776544432 2277788888999999888 99889999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCCCcchhhhHHHHHHHHHHHHHHhhHHhcCCCcHHHHHHhhhHhHHHH--HHHHHHHH
Q 005397 288 NRVVQWAEWEIEYFVRLVKENAPPSETISAMRAASISVEASVNYCSLLESQGLKLSRLLLLLLRPYIEEV--LELNFRRA 365 (698)
Q Consensus 288 S~~V~WA~~Ele~Fa~l~~Rqv~ss~~~~~l~~~aeCv~ia~~hc~~L~e~GLdl~flL~~lLrp~ve~a--L~~~~~ri 365 (698)
+..++|+..++++|+..+.||+-... .+.+++++||+.|..||.+|..+|+|+++.++.|+|..+|.. +..+++-|
T Consensus 424 ~~~~q~~~~~ldtl~~~l~~s~~e~~--~~~s~~a~iv~~a~~~~~qL~~ig~~lt~~~~~Llr~~le~s~~l~~~~E~~ 501 (673)
T KOG2215|consen 424 YTSFQVLNKELDTLGRQLPRSYEEQG--PARSMVAEIVKRAEHTSEQLTLIGLDLTIRDEALLRSKLESSQLLEGFKEGI 501 (673)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhcC--chHHHHHHHHHHhhhhHHHHHHHHhhHHHHHHhhhhhhHHHhhhhhcchhhH
Confidence 99999999999999999999985433 236789999999999999999999999999999999999999 99999999
Q ss_pred HHHHhhhhh-cCCcccc--CCCCCCCC----------------cc-cCCCCceecchhHHHHHHHHHHHHhhcccccccc
Q 005397 366 RKMVFNLED-IDESLLL--SPHFMSPL----------------SL-FATSSDSMLVDSGSRFMHIVEEILEQLTPLVVLH 425 (698)
Q Consensus 366 ~e~i~~~~~-~D~W~~~--~~~~~~~~----------------s~-~~~~~~~~LT~S~~~F~~~vq~fled~~~L~~~~ 425 (698)
+|.+..+.+ ++.|+++ .++++++- ++ ..+.+|++|++..+.|.+.++.+++-.+++..+.
T Consensus 502 ~~ald~r~~~ee~W~~~~L~t~s~Lk~l~ee~~~~gv~~~~~~~~~~e~d~~~nl~~q~v~~~~~~~~~le~d~~l~k~~ 581 (673)
T KOG2215|consen 502 ADALDNRNREEESWVRYLLQTESALKDLSEELSDLGVIYLRQISHELEGDGWLNLSSQLVVSKKQLMHLLEKDLPLGKLE 581 (673)
T ss_pred HHHHHhhhhHHHHHHHHHHhhHHHHHHHHHHhhhhhhhhHhhhhcccccceEEehhHHHHHHHHHHHHHHHhhhccchhh
Confidence 999999999 9999998 66666551 21 2788999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhCCCC
Q 005397 426 FGGNILTRISQLFDKYLDALNRALPGP 452 (698)
Q Consensus 426 L~~~il~~l~~lF~~yv~~L~~al~~~ 452 (698)
+..++++++.+.--.|++++...+.+.
T Consensus 582 l~~~lLe~L~e~~~~~lQ~l~~~~~~~ 608 (673)
T KOG2215|consen 582 LAFQLLELLAETLSIALQSLWLKIDDE 608 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 999999999998888889998886664
No 3
>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi. Vps51 (also known as Vps67) is a subunit of VFT and interacts with the SNARE Tlg1 [].
Probab=99.64 E-value=1.7e-15 Score=132.49 Aligned_cols=85 Identities=24% Similarity=0.269 Sum_probs=82.7
Q ss_pred CCCCCCChhhhHHHhhccCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 11 PSIESITPQSKIDSVYQSHTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGIL 89 (698)
Q Consensus 11 f~~~~Fdp~~Yv~~~~~~~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~l 89 (698)
|.+++|||+.|+++++++.+.++|++++++|.... .+.++||++||.||..||.+|+||+.||++|.+|+++|+++...
T Consensus 1 ~~~~~fd~~~~~~~~l~~~s~~~i~~~~~~L~~~i~~~~~eLr~~V~~nY~~fI~as~~I~~m~~~~~~l~~~l~~l~~~ 80 (87)
T PF08700_consen 1 FDSENFDVDEYFKDLLKNSSIKEIRQLENKLRQEIEEKDEELRKLVYENYRDFIEASDEISSMENDLSELRNLLSELQQS 80 (87)
T ss_pred CCCCcCCHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHhh
Q 005397 90 VQDLMT 95 (698)
Q Consensus 90 v~~L~~ 95 (698)
++.+.+
T Consensus 81 ~~~l~~ 86 (87)
T PF08700_consen 81 IQSLQE 86 (87)
T ss_pred HHHhhc
Confidence 999864
No 4
>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [].
Probab=99.38 E-value=3.1e-10 Score=123.20 Aligned_cols=308 Identities=14% Similarity=0.101 Sum_probs=219.9
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh---hhhhc
Q 005397 32 KGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGILVQDLMTGVCRQLE---ELSVA 107 (698)
Q Consensus 32 k~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~~~~~s~~~---~w~~~ 107 (698)
..+.+--..|.+-. .....++.=-++||..||++++-...+..++..+++.+.+-..-+..|.+....... .+..+
T Consensus 10 ~~L~~Ep~~L~~~~~~l~~ql~~La~~~y~~fi~~~~~~~~i~~~~~~~~~~l~~L~~~l~~L~~~~~~f~~~~~~~~~~ 89 (338)
T PF04124_consen 10 ESLFSEPQSLSEEIASLDAQLQSLAFRNYKTFIDNAECSSDIRQELSSLSDSLDSLLDSLPELDEACQRFSSKAQKISEE 89 (338)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444434 555677778899999999999999999999999999888866666666654422211 11110
Q ss_pred CCCcccccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhhccccccCCCCChHHHHhHHHHHH
Q 005397 108 NGNIDESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERNFPELRSSGEASSAQASSFKSDFL 187 (698)
Q Consensus 108 ~~~~~~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~l~~~~~~~~~~~~~~~~lk~~i~ 187 (698)
........+ -.+..-=+-++|.-+|.||-.+.|+||+++..-+++.....++ ...+..+...+.
T Consensus 90 ---r~~~~~~l~--------~~~~l~diLElP~Lm~~ci~~g~y~eALel~~~~~~L~~~~~~-----~~lv~~i~~ev~ 153 (338)
T PF04124_consen 90 ---RKKASLLLE--------NHDRLLDILELPQLMDTCIRNGNYSEALELSAHVRRLQSRFPN-----IPLVKSIAQEVE 153 (338)
T ss_pred ---HHHHHHHHH--------HHHHHHHHHhhHHHHHHHHhcccHhhHHHHHHHHHHHHHhccC-----chhHHHHHHHHH
Confidence 000000000 0012234677899999999999999999999988876665443 123556666677
Q ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCCcchH--HHHHHHHHHHHHHHhhhhcccCCCCCCccccchhhHHH
Q 005397 188 KRKAMVEDQLVKITEQPSIGILELKKALTDLIKLGKGPLA--HQLLLKYYASRLQRSFEVYLPSSSVCPEVFPATISKLV 265 (698)
Q Consensus 188 eR~~~La~~L~~~~~~~s~~~~~~rravs~L~RLG~~~~A--~~lfL~~rs~~I~~~~R~lr~eg~~~g~~YI~~LS~v~ 265 (698)
+-...+...|...+..| ..-+..-|.+++|-|++.-+.+ +-.||.+|..-+++.+..+--. .+..|+..+..+|
T Consensus 154 ~~~~~ml~~Li~~L~~~-l~l~~~ik~v~~Lrrl~~~~e~~Lr~~fl~~r~~~l~~~l~~i~~~---~~~~~lkr~iei~ 229 (338)
T PF04124_consen 154 AALQQMLSQLINQLRTP-LKLPACIKTVGYLRRLPVLTESELRLKFLQSRDSWLQSVLEEIDKS---DPYRYLKRYIEIY 229 (338)
T ss_pred HHHHHHHHHHHHHHcCc-ccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhhhHHHHhhh---hHHHHHHHHHHHH
Confidence 66777777888888887 7788888999999999986655 6999999999999988876432 3468999999997
Q ss_pred hhhHHHHHHHHHhhhCCC-CC----------chhHHHHHHHHHHHHHHHHHHhhCCCCcchhhh-HHHHHHHHHHHHHHh
Q 005397 266 FSTVSLTTKDSGLIFGDN-PV----------YSNRVVQWAEWEIEYFVRLVKENAPPSETISAM-RAASISVEASVNYCS 333 (698)
Q Consensus 266 Ft~I~~ta~ef~~~F~~~-~~----------~~S~~V~WA~~Ele~Fa~l~~Rqv~ss~~~~~l-~~~aeCv~ia~~hc~ 333 (698)
=..+-++..-|.++|++. +. -.+.+..|+...+..|...+++++.... ++.+ +.+.+|+ ..|.
T Consensus 230 R~~~fdiitqY~aIF~~e~~~~~~~~~~~~~~~~~l~sw~~~~v~~~l~~L~~~L~~~~-~~~~~sll~q~~----y~~~ 304 (338)
T PF04124_consen 230 REHLFDIITQYRAIFPDESSTSVSLQDRPKFIPSELFSWALHRVSSFLETLEMYLPRVD-ESSRESLLTQLM----YFAS 304 (338)
T ss_pred HHHHHHHHHHHHHHcCCccccccccccccccChhHHHHHHHHHHHHHHHHHHHHhhccc-cchHHHHHHHHH----HHHH
Confidence 777777778899999932 21 2367888999999999999999995442 1122 2244553 3457
Q ss_pred hHHhcCCCcHHHHHHhhhHhHHHHHHHHHHH
Q 005397 334 LLESQGLKLSRLLLLLLRPYIEEVLELNFRR 364 (698)
Q Consensus 334 ~L~e~GLdl~flL~~lLrp~ve~aL~~~~~r 364 (698)
.|.-+|.||+.++..+|...+.+....+...
T Consensus 305 S~~r~g~DF~~ll~~~~~~~~~~~f~~~~~~ 335 (338)
T PF04124_consen 305 SFGRVGADFRPLLAPLFERAVLNLFETSVST 335 (338)
T ss_pred hcCccCCChHHHhHHHHHHHHHHHHHHHHHh
Confidence 7788999999999999988888877776654
No 5
>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells. These include cytoplasmic dynein targeting to Golgi and other membranes, and SNARE-mediated ER-Golgi trafficking [, ]. Dominant-negative ZW10, anti-ZW10 antibody, and ZW10 RNA interference (RNAi) cause Golgi dispersal. ZW10 RNAi also disperse endosomes and lysosomes []. Drosophila kinetochore components Rough deal (Rod) and Zw10 are required for the proper functioning of the metaphase checkpoint in flies []. The eukaryotic spindle assembly checkpoint (SAC) monitors microtubule attachment to kinetochores and prevents anaphase onset until all kinetochores are aligned on the metaphase plate. It is an essential surveillance mechanism that ensures high fidelity chromosome segregation during mitosis. In higher eukaryotes, cytoplasmic dynein is involved in silencing the SAC by removing the checkpoint proteins Mad2 and the Rod-Zw10-Zwilch complex (RZZ) from aligned kinetochores [, , ].; GO: 0007067 mitosis, 0000775 chromosome, centromeric region, 0005634 nucleus
Probab=98.64 E-value=0.0013 Score=76.91 Aligned_cols=429 Identities=15% Similarity=0.105 Sum_probs=251.7
Q ss_pred CHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------Hhhhhhh
Q 005397 30 TEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGILVQD---------LMTGVCR 99 (698)
Q Consensus 30 ~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~---------L~~~~~s 99 (698)
+..+++...++|.... +...+.+..+.+||..|+...+...+|-.+ .+.+..+=..+++. +.+....
T Consensus 8 ~~edl~~~I~~L~~~i~~~k~eV~~~I~~~y~df~~~~~~~~~L~~~---~~~l~~eI~d~l~~~~~~~i~~~l~~a~~e 84 (593)
T PF06248_consen 8 SKEDLRKSISRLSRRIEELKEEVHSMINKKYSDFSPSLQSAKDLIER---SKSLAREINDLLQSEIENEIQPQLRDAAEE 84 (593)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH---HHHHHHHHHHHHHhhccchhHHHHHHHHHH
Confidence 4567888888887777 888888999999999999765555555222 22222222122222 2111100
Q ss_pred hhhhhhhcCCCcccccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhhccccccCCCCChHHH
Q 005397 100 QLEELSVANGNIDESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERNFPELRSSGEASSAQA 179 (698)
Q Consensus 100 ~~~~w~~~~~~~~~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~l~~~~~~~~~~~~~~ 179 (698)
...- . ......+... ..-+....+.+..+..+-.+.++++.+|.+.+++.+..+..++..+......+
T Consensus 85 ~~~L-~---~eL~~~~~~l--------~~L~~L~~i~~~l~~~~~al~~~~~~~Aa~~L~~~~~~L~~l~~~~~~~~~i~ 152 (593)
T PF06248_consen 85 LQEL-K---RELEENEQLL--------EVLEQLQEIDELLEEVEEALKEGNYLDAADLLEELKSLLDDLKSSKFEELKIL 152 (593)
T ss_pred HHHH-H---HHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCcCcccccHHH
Confidence 0000 0 0000000000 00124567888888999999999999999999999999988644333345567
Q ss_pred HhHHHHHHHHHHHHHHHHHHH---hcC----CC-----------------CChH--HHHHHHHHHHhcCCcchHHHHHHH
Q 005397 180 SSFKSDFLKRKAMVEDQLVKI---TEQ----PS-----------------IGIL--ELKKALTDLIKLGKGPLAHQLLLK 233 (698)
Q Consensus 180 ~~lk~~i~eR~~~La~~L~~~---~~~----~s-----------------~~~~--~~rravs~L~RLG~~~~A~~lfL~ 233 (698)
..++.....++..|...|.+. +.. ++ .... .+...+..|-+||.-+..-..|-+
T Consensus 153 ~~Lk~e~~~lr~~L~~~L~~~w~~lv~~~~~~~k~~~~~~~~~~v~l~vs~~~~~~~L~~vl~AL~~lg~L~~~l~~~~~ 232 (593)
T PF06248_consen 153 KLLKDEYSELRENLQYQLSEEWERLVQWDSPSSKQLSSPESTLKVTLHVSKSESQESLQDVLQALEILGILDYKLKKFSK 232 (593)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcccccccccceEEEEEeecCcccchHHHHHHHHHHhCchhHHHHHHHH
Confidence 889999999999999999744 111 11 0111 278899999999987665554433
Q ss_pred HHH-HHHHHhhhhcccCCCC------CCc-----cccchh-------hHHHhhhHHHHHHHHHhhhCCCCC-chhHHHHH
Q 005397 234 YYA-SRLQRSFEVYLPSSSV------CPE-----VFPATI-------SKLVFSTVSLTTKDSGLIFGDNPV-YSNRVVQW 293 (698)
Q Consensus 234 ~rs-~~I~~~~R~lr~eg~~------~g~-----~YI~~L-------S~v~Ft~I~~ta~ef~~~F~~~~~-~~S~~V~W 293 (698)
.-- ..|+-.+.. |.+.. .+. .|.... -.-+|+.|....+-....+...|. -.+-+..+
T Consensus 233 ~Ll~~ii~PlI~~--p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~V~~~l~~vf~fL~~~L~~~~~~~~~l~~~~ 310 (593)
T PF06248_consen 233 FLLEHIIKPLISH--PSSIVSVEESEDGSVEITLSYEPDSSKDKRPSPKEVFSNLLLVFEFLHQHLLSLPSSDSSLSESF 310 (593)
T ss_pred HHHHHHHHHHhcC--CCCcccccccCCCcceEEEEeecccccccCCCHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHH
Confidence 322 223333321 11110 101 122111 124566666655544444422211 11234444
Q ss_pred HHHHHHHHHHHHHhhC---CCCcchhhhHHHHHHHHHHHHHHhhHHhcCCCcHHHHHHhhhHhHHHH----HHHHHHHHH
Q 005397 294 AEWEIEYFVRLVKENA---PPSETISAMRAASISVEASVNYCSLLESQGLKLSRLLLLLLRPYIEEV----LELNFRRAR 366 (698)
Q Consensus 294 A~~Ele~Fa~l~~Rqv---~ss~~~~~l~~~aeCv~ia~~hc~~L~e~GLdl~flL~~lLrp~ve~a----L~~~~~ri~ 366 (698)
.+.=...+...+..+. ..|....++.....-++.+.+-+..|.+.|+--... ..|...++++ ....+.+|.
T Consensus 311 g~~i~~~ls~~lI~~~L~~aiP~~~~~l~~f~~v~~~~~~Fe~~L~~lgf~~~~~--~~L~~~~~~i~~~f~~kr~~~iL 388 (593)
T PF06248_consen 311 GDHIWPRLSELLISNCLSPAIPTSASELQEFEEVLESVEEFEEALKELGFLSSDN--TELSEFVDNIETHFANKRCQDIL 388 (593)
T ss_pred HHHHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCc--hHHHHHHHhHHHHHHHHHHHHHH
Confidence 5554556666666654 233344567677777888889999999999932221 3333333333 334455667
Q ss_pred HHHhhhhhcCCcccc-CCCC------C------------------CC----Cc-ccCCCCceecchhHHHHHHHHHHHHh
Q 005397 367 KMVFNLEDIDESLLL-SPHF------M------------------SP----LS-LFATSSDSMLVDSGSRFMHIVEEILE 416 (698)
Q Consensus 367 e~i~~~~~~D~W~~~-~~~~------~------------------~~----~s-~~~~~~~~~LT~S~~~F~~~vq~fle 416 (698)
+..|..+..|.+..+ ..|. . .. .+ ..-.-+.|+.|.|+..|+.++.+.+.
T Consensus 389 ~~AR~lm~~~~~~~v~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~c~IS~s~~~l~~L~~~~L~ 468 (593)
T PF06248_consen 389 DKARDLMLRDLHDTVKVGPDSKAELPKLPSPGSSNKAKAKEESMSNENEDSLSPSLFQFPRCRISKSAQELVELAHQTLK 468 (593)
T ss_pred HHHHHHHhcccccceEecccccccCCCCCCCcccchhhcccchhcccCccccccccccCCcceechhHHHHHHHHHHHHH
Confidence 778888888877655 1111 0 00 00 01122358999999999999999999
Q ss_pred hcccccccchhhhHHHHHHHHHHHHHHHHHHhCCCCCCCccccccccCcccccCChHHHhH-HHHHHHHHHhhhhhhhh
Q 005397 417 QLTPLVVLHFGGNILTRISQLFDKYLDALNRALPGPSDDDNLTELKETIPFRAETDSEQLS-LLGVAFTIMDELLPNTV 494 (698)
Q Consensus 417 d~~~L~~~~L~~~il~~l~~lF~~yv~~L~~al~~~~~~~~~~e~~~~~~~~a~t~~qq~a-il~Na~~l~d~Llp~~~ 494 (698)
++.. -+......+...+.++|.-|...+ |... .+ . -++.||+-+ ...||.||+..|+-.+.
T Consensus 469 ea~~-~~~~~a~~l~~~~r~i~~ly~~~v----P~~h--~~--------~--l~~ip~~aalf~NdC~ylah~l~~l~~ 530 (593)
T PF06248_consen 469 EACK-SSERCAAQLFQTARDIFELYRAVV----PVYH--KK--------L--LESIPQQAALFHNDCMYLAHHLLTLGH 530 (593)
T ss_pred HHhc-CChhhHHHHHHHHHHHHHHHHHHc----cHHH--Hh--------h--cccccHHHHhHhcchHHHHHHHHHhHH
Confidence 9933 355556667777788888888653 2211 00 0 256888888 67999999999876654
No 6
>KOG2346 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.47 E-value=1.3e-05 Score=88.89 Aligned_cols=207 Identities=12% Similarity=0.032 Sum_probs=139.7
Q ss_pred CCCCCCChhhhHHHhhccCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH-------HHHHHHHHHHHH
Q 005397 11 PSIESITPQSKIDSVYQSHT-EKGIRKLCCELLDLKDAVENLCGNMHTKYLAFLRLSEEVV-------ETEHELMELRKH 82 (698)
Q Consensus 11 f~~~~Fdp~~Yv~~~~~~~~-ek~lr~~~~~L~~lk~t~e~LkknVy~NY~~FI~tSKEIs-------~LE~Em~qL~~l 82 (698)
....+|||+.|++-+.+.++ +.=++..-.=.+++++--.+|+.-||.||--||-+..=|. .||+||-+|..-
T Consensus 28 lngahFDpEvyldkL~REcpLaqLidsetdMV~qIRaLDSDmqtLVYENYNKFisATdTirkmk~~f~~me~eMd~L~~~ 107 (636)
T KOG2346|consen 28 LNGAHFDPEVYLDKLPRECPLAQLIDSETDMVQQIRALDSDMQTLVYENYNKFISATDTIRKMKSNFFGMEQEMDGLEEV 107 (636)
T ss_pred cCCCCCCHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHhchHHHHHHHhhcchhhhcchHHHHHHhhhhhhcchhhhHHHH
Confidence 45678999999999998888 4444444445566667778999999999999998855554 456777766544
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhcCCCcccccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHH
Q 005397 83 ISAQGILVQDLMTGVCRQLEELSVANGNIDESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEE 162 (698)
Q Consensus 83 LseQ~~lv~~L~~~~~s~~~~w~~~~~~~~~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~ 162 (698)
. +.|+++.++.+..+-+--......+ +.+. .......+-++|--|--|+..+.+-+|+...-.+.
T Consensus 108 m----s~i~~~s~~l~g~L~ekre~I~kLg---~~~~--------llrkvqfifdLP~rLrkc~~~~aYG~avR~~~~A~ 172 (636)
T KOG2346|consen 108 M----SSIQSKSDGLAGSLFEKRELIKKLG---QRPP--------LLRKVQFIFDLPRRLRKCGRAPAYGAAVRGSSEAT 172 (636)
T ss_pred H----HHHhhhhccccchhHHhHHHHHHhc---CCcc--------chhhhHHHhhhHHHHHHhccccccchhhccccccc
Confidence 3 3455555444211110000000001 1111 11346789999999999999999999999888888
Q ss_pred hhccccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Q 005397 163 RNFPELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKITEQPSIGILELKKALTDLIKLGKGPLAHQLLLKYYAS 237 (698)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~~~~~s~~~~~~rravs~L~RLG~~~~A~~lfL~~rs~ 237 (698)
..+...+..+ + +.....+=.+-..+|+.+|..-+.+++.+.++.-.|+.+|..||..-.--..+|-.+.+
T Consensus 173 ~~L~qY~~~p--s---fq~~~~~seei~~rl~~qL~~rlr~~~sga~~raEAv~LLl~lg~p~del~~~lL~~~e 242 (636)
T KOG2346|consen 173 GKLRQYDGRP--S---FQEDDVPSEEIRLRLVAQLGTKLRSDSSGAQARAEAVVLLLQLGVPVDELKAKLLEKLE 242 (636)
T ss_pred cchhhcCCCC--c---HHHhccchHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHhcCCChHHHHHHHHHHHh
Confidence 7776654322 1 22222234566778899999888888887778888999999999987776666655543
No 7
>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.34 E-value=0.0044 Score=70.80 Aligned_cols=330 Identities=12% Similarity=0.091 Sum_probs=200.1
Q ss_pred ChhhhHHHhhccCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 005397 17 TPQSKIDSVYQSHTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGILVQDLMT 95 (698)
Q Consensus 17 dp~~Yv~~~~~~~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~~ 95 (698)
+-+.||+++. ..+-+++++-+..|.+-+ .-...++.--+.||..||++|+=+-+.=.+....++.+-+----+-.|.+
T Consensus 20 ~~~~~v~~l~-~~~~e~l~ke~~~La~e~~~i~~q~q~La~~ny~t~id~A~~~~~i~~~~~~~~~~~~~l~l~~~~L~s 98 (581)
T KOG2069|consen 20 EMDAYVRELT-TKPLEELRKEKALLAEEAAKIDAQTQDLARDNYKTLIDTARNTDAIYQLFGRSRHDLKELSLQLPELTS 98 (581)
T ss_pred hhHHHHHHHc-CCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHhhHHhhh
Confidence 3347999875 234677777777776666 66667888889999999998876655544444444433221111112222
Q ss_pred hhhhhhhhhhhcCCCcc--cccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhhccccccCCC
Q 005397 96 GVCRQLEELSVANGNID--ESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERNFPELRSSGE 173 (698)
Q Consensus 96 ~~~s~~~~w~~~~~~~~--~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~l~~~~~~~~ 173 (698)
..-.... .+.. .++. ...... + -.+...-+.++|+-+|-||-.++|+||.++-.-+.+.-... +.
T Consensus 99 ~~~~f~~-~~~~-i~e~~~~~~~~l------~--~~~~l~ellelp~lM~~cir~~~~~ealel~a~~~RL~~~~---~~ 165 (581)
T KOG2069|consen 99 PCKRFQD-FAEE-ISEHRRLNSLTL------D--KHPQLLELLELPQLMDRCIRNGYYDEALELAAYASRLKQRF---GT 165 (581)
T ss_pred HHHHHHH-HHHH-hhHhHHHHHHHH------h--hcchhHHHHhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhc---cc
Confidence 2211111 0000 0000 000000 0 00123457889999999999999999999887765433221 11
Q ss_pred CChHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCCcch--HHHHHHHHHHHHHHHhhhhcccCCC
Q 005397 174 ASSAQASSFKSDFLKRKAMVEDQLVKITEQPSIGILELKKALTDLIKLGKGPL--AHQLLLKYYASRLQRSFEVYLPSSS 251 (698)
Q Consensus 174 ~~~~~~~~lk~~i~eR~~~La~~L~~~~~~~s~~~~~~rravs~L~RLG~~~~--A~~lfL~~rs~~I~~~~R~lr~eg~ 251 (698)
. .++..+-+.+.+-...+-++|...+..|- ...+--|.+..|-|.+-... =|--||..|-+.+.+.+-.|.-.
T Consensus 166 -~-pvi~~i~~~v~~tv~~ll~qL~~~l~~pl-~l~~cirvv~ylr~~~~~t~~~LRl~fl~~rd~~l~k~l~~I~~~-- 240 (581)
T KOG2069|consen 166 -I-PVIQEIATEVEQTVQKLLEQLIQQLRTPL-QLPECIRVVGYLRRMAVLTENQLRLKFLQARDAWLEKILEDISTN-- 240 (581)
T ss_pred -c-hHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcccc--
Confidence 1 23555555555666666666666555433 33344555666665544333 35556778888888877776432
Q ss_pred CCCccccchhhHHHhhhHHHHHHHHHhhhCCC-----CCc-------hhHHHHHHHHHHHHHHHHHHhhC-CCCcchhhh
Q 005397 252 VCPEVFPATISKLVFSTVSLTTKDSGLIFGDN-----PVY-------SNRVVQWAEWEIEYFVRLVKENA-PPSETISAM 318 (698)
Q Consensus 252 ~~g~~YI~~LS~v~Ft~I~~ta~ef~~~F~~~-----~~~-------~S~~V~WA~~Ele~Fa~l~~Rqv-~ss~~~~~l 318 (698)
.+..|+.+...++=..+-++.--|.++|++. +.+ .+.+..|.-..+..|-.++.+-+ -... .+
T Consensus 241 -~~~~~l~~~i~~~r~~lf~~i~qY~aifpe~~~~~n~~~~~~~~~~~~~~~~w~~~~~ss~l~~i~~~~~~~~~---~l 316 (581)
T KOG2069|consen 241 -NPYLYLKKTIEIIRVNLFDIITQYLAVFPEDEGDLNPNGDVRYKNITDLLISWVLSKISSFLQLIEMMLKKGIE---SL 316 (581)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCcccCCCccCchhhhhhhHHHhhccHHHHHHHHHHhhhc---hH
Confidence 2346777777766666666666699999872 222 36789999999999999988665 2211 12
Q ss_pred -HHHHHHHHHHHHHHhhHHhcCCCcHHHHHHhhhHhHHHHHHHHHHHHHHHHhhhh
Q 005397 319 -RAASISVEASVNYCSLLESQGLKLSRLLLLLLRPYIEEVLELNFRRARKMVFNLE 373 (698)
Q Consensus 319 -~~~aeCv~ia~~hc~~L~e~GLdl~flL~~lLrp~ve~aL~~~~~ri~e~i~~~~ 373 (698)
.++-.||-.+++... +|+||+.++..+|...|.+-...|...-.+......
T Consensus 317 ~~vl~~cmyf~~SF~r----vg~Dfr~~lap~f~~~vl~~F~knvqe~vEkfq~el 368 (581)
T KOG2069|consen 317 EHVLGQLMYFALSFGR----VGLDFRGLLAPLLECVVLQRFMKNVEEATEKFELEL 368 (581)
T ss_pred HHHHHHHHHHHHhhcc----ccchhcccccHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 348889887776665 999999998888877776666666555555444443
No 8
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []. COG7 is required for normal Golgi morphology and trafficking. Mutation in COG7 causes a congenital disorder of glycosylation [].
Probab=98.29 E-value=0.00054 Score=82.38 Aligned_cols=416 Identities=15% Similarity=0.168 Sum_probs=231.0
Q ss_pred cCCCCCCCCCChhhhHHHhhccCCH----HH----HHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 005397 7 DDDFPSIESITPQSKIDSVYQSHTE----KG----IRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELM 77 (698)
Q Consensus 7 ~~~~f~~~~Fdp~~Yv~~~~~~~~e----k~----lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~ 77 (698)
|...|++++|||-+||..-++..+. .. +..+-.+|+-.. +++..|-+..-+==..==++.+||..|..|..
T Consensus 1 d~s~f~~~~FD~~~WIN~~~~~~~~~~~~~~~d~~ls~l~~kLql~~qe~~~~le~~~~q~l~~~Pr~~~ev~~l~~ea~ 80 (766)
T PF10191_consen 1 DLSAFSDDDFDVKAWINAALKSRSKDEALEKADAHLSSLVMKLQLYSQEVNASLEETSQQALQRVPRVLREVDRLRQEAA 80 (766)
T ss_pred ChhhhCcCCCCHHHHHHHHhhccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 4567999999999999999998442 22 444444444443 44443333332222222278999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCccccc----CCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHH
Q 005397 78 ELRKHISAQGILVQDLMTGVCRQLEELSVANGNIDESL----SDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEE 153 (698)
Q Consensus 78 qL~~lLseQ~~lv~~L~~~~~s~~~~w~~~~~~~~~~~----~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~fee 153 (698)
.|++-+..=+.-+......+...+.. ....+..| .+.+. ..+-..|-. +.-++|-+++.++++.
T Consensus 81 ~L~~~~~~v~~~~~~~e~~t~~s~~~----L~~ld~vK~rm~~a~~~-------L~EA~~w~~-l~~~v~~~~~~~d~~~ 148 (766)
T PF10191_consen 81 SLQEQMASVQEEIKAVEQDTAQSMAQ----LAELDSVKSRMEAARET-------LQEADNWST-LSAEVDDLFESGDIAK 148 (766)
T ss_pred HHHHHHHHHHHHHhhhhccHHHHHHH----HHHHHHHHHHHHHHHHH-------HHHHHhHHH-HHHHHHHHHhcCCHHH
Confidence 99888766444444433222110000 00000010 11110 113457876 6669999999999999
Q ss_pred HHHHHHHHHhhccccccCCCCCh--HHHHhHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCCcchHHHHH
Q 005397 154 AIEVLDAEERNFPELRSSGEASS--AQASSFKSDFLKRKAMVEDQLVKITEQPSIGILELKKALTDLIKLGKGPLAHQLL 231 (698)
Q Consensus 154 Av~llek~~~~l~~~~~~~~~~~--~~~~~lk~~i~eR~~~La~~L~~~~~~~s~~~~~~rravs~L~RLG~~~~A~~lf 231 (698)
+.+.|...++-+.-+...+.-.. ..+..+|.+++. .+.-.|+..+.+.. ....|.-+..+.++|+.++.+..|
T Consensus 149 ~a~~l~~m~~sL~~l~~~pd~~~r~~~le~l~nrLEa---~vsp~Lv~al~~~~--~~~~~~~~~if~~i~R~~~l~~~Y 223 (766)
T PF10191_consen 149 IADRLAEMQRSLAVLQDVPDYEERRQQLEALKNRLEA---LVSPQLVQALNSRD--VDAAKEYVKIFSSIGREPQLEQYY 223 (766)
T ss_pred HHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHH---HhhHHHHHHHHhcC--HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999987776644321111 112222222221 22234555554433 358889999999999999999999
Q ss_pred HHHHHHHHHHhhhhcccCCCCC-CccccchhhHHHhhhHHHHHHHHHhhhCCCCCchhHHHHHHHHHHH-HHHHHHHhhC
Q 005397 232 LKYYASRLQRSFEVYLPSSSVC-PEVFPATISKLVFSTVSLTTKDSGLIFGDNPVYSNRVVQWAEWEIE-YFVRLVKENA 309 (698)
Q Consensus 232 L~~rs~~I~~~~R~lr~eg~~~-g~~YI~~LS~v~Ft~I~~ta~ef~~~F~~~~~~~S~~V~WA~~Ele-~Fa~l~~Rqv 309 (698)
-+.|...+++.=.....+.... -..++..+--.+.+.+.+=.+|-..+|+++......++.=+-..+. .|...+...+
T Consensus 224 ~~~r~~~l~~~W~~~~~~~~~~~~~~~L~~fyd~ll~~l~~E~~w~~~vF~~~~~~~~~ll~~~L~~L~PS~~~~l~~al 303 (766)
T PF10191_consen 224 CKCRKAPLQRLWQEYCQSDQSQSFAEWLPSFYDELLSLLHQELKWCSQVFPDESPVLPKLLAETLSALQPSFPSRLSSAL 303 (766)
T ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhcCccHHHHHHHHH
Confidence 9999999998866654332111 1345555556666777777889999999864321122111111111 1111222112
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHhhHHhc----C--CC---cHHHHHHhhhHhHHHHHHHHHHHHHHHHhhhhhcCCccc
Q 005397 310 PPSETISAMRAASISVEASVNYCSLLESQ----G--LK---LSRLLLLLLRPYIEEVLELNFRRARKMVFNLEDIDESLL 380 (698)
Q Consensus 310 ~ss~~~~~l~~~aeCv~ia~~hc~~L~e~----G--Ld---l~flL~~lLrp~ve~aL~~~~~ri~e~i~~~~~~D~W~~ 380 (698)
........|....+|-+++...+..|+.. . .+ +..++..++-|. ......|...=+..+... +..
T Consensus 304 ~~~~~~~~L~~L~~l~~~t~~Fa~~l~~~l~~~~~~~~l~~~~~l~~al~~PF-~~~q~~Yg~lE~~~L~~~-----L~~ 377 (766)
T PF10191_consen 304 KRAGPETKLETLIELYQATEHFARNLEHLLSSLPGESNLSKVEELLQALFEPF-KPYQQRYGELERRFLSAQ-----LSA 377 (766)
T ss_pred hhcCchhhHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-----HHh
Confidence 11111123666777777776666555531 1 12 222333333333 444444433222222222 111
Q ss_pred cCCCCCCCCcccCCCCceecchhHHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHhCC
Q 005397 381 LSPHFMSPLSLFATSSDSMLVDSGSRFMHIVEEILEQLTPLVVLHFGGNILTRISQLFDKYLDALNRALP 450 (698)
Q Consensus 381 ~~~~~~~~~s~~~~~~~~~LT~S~~~F~~~vq~fled~~~L~~~~L~~~il~~l~~lF~~yv~~L~~al~ 450 (698)
.....+ .+ .++-=.|..+..+...+..+=++-|..+..-==...++..|..+|..|++.+..+++
T Consensus 378 l~~~~~-~~----~d~v~~L~~s~~k~f~lae~Av~RC~~fT~G~~~~~Ll~Ald~~~~~y~~~~~~~l~ 442 (766)
T PF10191_consen 378 LDLESA-EL----SDAVRRLEESIPKLFGLAEEAVDRCIAFTGGYGVPGLLKALDSIFSQYLSSLTATLR 442 (766)
T ss_pred cccCCC-cH----HHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111100 00 011225677888888888888899988865443345678888899999987766554
No 9
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known.
Probab=97.69 E-value=0.0088 Score=64.06 Aligned_cols=220 Identities=15% Similarity=0.081 Sum_probs=145.5
Q ss_pred CCCCCCCChhhhHHHhhcc--CCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 10 FPSIESITPQSKIDSVYQS--HTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQ 86 (698)
Q Consensus 10 ~f~~~~Fdp~~Yv~~~~~~--~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ 86 (698)
.|-+++|||..|.=..+.. .+...|.+.+.+|...- .....|-+.|-+||..|..+-++|..|+.++..--..+.+-
T Consensus 7 ~yF~~~FD~~~~~L~~l~~~~~~~~~i~~~~ekLs~~ldvVe~~L~~~I~~~s~~f~~a~~~v~el~~~l~~a~~~~~~~ 86 (291)
T PF10475_consen 7 IYFDEDFDPVRYELEKLPEDELDLEDIEELQEKLSHYLDVVEKKLSREISEKSDSFFQAMSSVQELQDELEEALVICKNL 86 (291)
T ss_pred hhcCCCCCchHHHHHhCCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555699999997555444 35678888888888877 77789999999999999999999999999998888888777
Q ss_pred HHHHHHHhhhhhh----hhhhhhhcCCCcccccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHH
Q 005397 87 GILVQDLMTGVCR----QLEELSVANGNIDESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEE 162 (698)
Q Consensus 87 ~~lv~~L~~~~~s----~~~~w~~~~~~~~~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~ 162 (698)
|.-++...+.... ++.. .+....... -.+ .-+..+-+.+.-..++.++++++|..|++++.+++
T Consensus 87 R~~L~~~~~~~~~~~L~Il~~-~rkr~~l~~---ll~--------~L~~i~~v~~~~~~l~~ll~~~dy~~Al~li~~~~ 154 (291)
T PF10475_consen 87 RRNLKSADENLTKSGLEILRL-QRKRQNLKK---LLE--------KLEQIKTVQQTQSRLQELLEEGDYPGALDLIEECQ 154 (291)
T ss_pred HHHHHHHHHHhHHHHHHHHHH-HHHHHHHHH---HHH--------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 7777777665421 1110 000000000 000 00123555666678999999999999999999999
Q ss_pred hhccccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHHhcCC--CCChHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Q 005397 163 RNFPELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKITEQP--SIGILELKKALTDLIKLGKGPLAHQLLLKYYASRLQ 240 (698)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~~~~~--s~~~~~~rravs~L~RLG~~~~A~~lfL~~rs~~I~ 240 (698)
+.+..+..-. -+..+..++.+-...+.+.|-..+..- ..-+..-.+....-.-||+...|.+-+.......|.
T Consensus 155 ~~l~~l~~~~-----c~~~L~~~L~e~~~~i~~~ld~~l~~~~~~Fd~~~Y~~v~~AY~lLgk~~~~~dkl~~~f~~~i~ 229 (291)
T PF10475_consen 155 QLLEELKGYS-----CVRHLSSQLQETLELIEEQLDSDLSKVCQDFDPDKYSKVQEAYQLLGKTQSAMDKLQMHFTSAIH 229 (291)
T ss_pred HHHHhcccch-----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 9987654321 134444445544444444443222211 122334445555556678888898888888777777
Q ss_pred Hhhhhc
Q 005397 241 RSFEVY 246 (698)
Q Consensus 241 ~~~R~l 246 (698)
..++.+
T Consensus 230 ~~~~~v 235 (291)
T PF10475_consen 230 STTFSV 235 (291)
T ss_pred HHHHHH
Confidence 777764
No 10
>PF15469 Sec5: Exocyst complex component Sec5
Probab=97.02 E-value=0.022 Score=56.64 Aligned_cols=173 Identities=10% Similarity=0.078 Sum_probs=116.9
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh----hhhhcCCCcc---cccCCCccc
Q 005397 49 ENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGILVQDLMTGVCRQLE----ELSVANGNID---ESLSDPQKI 121 (698)
Q Consensus 49 e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~~~~~s~~~----~w~~~~~~~~---~~~~~~e~~ 121 (698)
++||.-|+.||..||..-.=|..+-.+|-..+.- ..+...+..|.+....... .|.+-.+.-+ ........
T Consensus 2 ~~lk~LV~~Nf~~Fv~~k~tid~i~~~~~~~~~~-~~~~~~~~~L~~~l~~~~~~~~~~~~pll~~~~k~~~l~~~l~~- 79 (182)
T PF15469_consen 2 EDLKSLVKENFDKFVSCKDTIDDIYEEFRNMKTE-AQQDSGTEKLEESLNEASSKANSVFKPLLERREKADKLRNALEF- 79 (182)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH-
Confidence 5799999999999999999999999998654443 2222333333322211000 0000000000 00000000
Q ss_pred ccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhhccccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHHh
Q 005397 122 ELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERNFPELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKIT 201 (698)
Q Consensus 122 ~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~l~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~~ 201 (698)
-+.-+-+=++|..|--+|..++|+.|+.--.+++..+..... ....+..+-..++.....+-..|-+.+
T Consensus 80 -------l~r~~flF~LP~~L~~~i~~~dy~~~i~dY~kak~l~~~~~~----~~~vf~~v~~eve~ii~~~r~~l~~~L 148 (182)
T PF15469_consen 80 -------LQRNRFLFNLPSNLRECIKKGDYDQAINDYKKAKSLFEKYKQ----QVPVFQKVWSEVEKIIEEFREKLWEKL 148 (182)
T ss_pred -------HHHHHHHHHhHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012357788999999999999999999999999998876531 122355566678888888888888888
Q ss_pred cCCCCChHHHHHHHHHHHhcCCcchHHHHHHHH
Q 005397 202 EQPSIGILELKKALTDLIKLGKGPLAHQLLLKY 234 (698)
Q Consensus 202 ~~~s~~~~~~rravs~L~RLG~~~~A~~lfL~~ 234 (698)
.++.....+..+.|..|..||-.+-..-.||..
T Consensus 149 ~~~~~s~~~~~~~i~~Ll~L~~~~dPi~~~l~~ 181 (182)
T PF15469_consen 149 LSPPSSQEEFLKLIRKLLELNVEEDPIWYWLES 181 (182)
T ss_pred hCCCCCHHHHHHHHHHHHhCCCCCCHHHHHHHc
Confidence 888888889999999999999887777776654
No 11
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=96.71 E-value=1.5 Score=49.15 Aligned_cols=336 Identities=10% Similarity=0.152 Sum_probs=205.9
Q ss_pred CCCChhhhHHHhhcc-CCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 14 ESITPQSKIDSVYQS-HTEKGIRKLCCELLDLK-DAVENLCGNMHTKY-------LAFLRLSEEVVETEHELMELRKHIS 84 (698)
Q Consensus 14 ~~Fdp~~Yv~~~~~~-~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY-------~~FI~tSKEIs~LE~Em~qL~~lLs 84 (698)
++|||-.|+..++.+ .+=.+|..+..++..-. ...++++..|-..- ..+-.+-..|..|-..+.+++.-=.
T Consensus 2 ~dfdpv~~in~lfp~e~SL~~ld~~i~~l~~~i~~ld~eI~~~v~~q~~~~~~~~~~l~~a~~~i~~L~~~i~~ik~kA~ 81 (383)
T PF04100_consen 2 PDFDPVDYINELFPDEQSLSNLDELIAKLRKEIRELDEEIKELVREQSSSGQDAEEDLEEAQEAIQELFEKISEIKSKAE 81 (383)
T ss_pred CCCCHHHHHHHhCCChHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999976 33356666666666665 66666665554321 2244555667788888888888777
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhcCCCcccccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhh
Q 005397 85 AQGILVQDLMTGVCRQLEELSVANGNIDESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERN 164 (698)
Q Consensus 85 eQ~~lv~~L~~~~~s~~~~w~~~~~~~~~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~ 164 (698)
.-...|+.+..+. +-++...+|....- .. + ++..=+.+.-+.|..++..|+|.|+..++......
T Consensus 82 ~sE~~V~~it~dI-k~LD~AKrNLT~SI---T~--L---------krL~MLv~a~~qL~~~~~~r~Y~e~a~~L~av~~L 146 (383)
T PF04100_consen 82 ESEQMVQEITRDI-KQLDNAKRNLTQSI---TT--L---------KRLQMLVTAVEQLKELAKKRQYKEIASLLQAVKEL 146 (383)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHH---HH--H---------HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7777777776544 22221111100000 00 0 23345566788999999999999999999998887
Q ss_pred ccccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHHhcC---------CCCChHHHHHHHHHHHhcCCcchHHHHHHHHH
Q 005397 165 FPELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKITEQ---------PSIGILELKKALTDLIKLGKGPLAHQLLLKYY 235 (698)
Q Consensus 165 l~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~~~~---------~s~~~~~~rravs~L~RLG~~~~A~~lfL~~r 235 (698)
+...+.-.+ -..+..+-.++..-+..|.+++...... +......++.|+..+--||.. +++-+++-+
T Consensus 147 ~~~F~~yks--i~~I~~L~~~i~~l~~~L~~qI~~df~~~f~~~~~~~~~~~~~~l~~aC~vvd~L~~~--~r~~li~wf 222 (383)
T PF04100_consen 147 LEHFKPYKS--IPQIAELSKRIDQLQNELKEQIFEDFEELFGSQGDESPGQSSQQLSDACLVVDALGPD--VREELIDWF 222 (383)
T ss_pred HHHHHcccC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchHhHHHHHHHHHHHcCch--HHHHHHHHH
Confidence 765543322 2347778788999899999888754211 111234788888988888876 556666665
Q ss_pred HHHHHHhhhhcccCCCCCCccccchhhHHHhhhHHHHHHH----HHhhhCCCC----CchhHHHHHHHHHHHHHHHHHHh
Q 005397 236 ASRLQRSFEVYLPSSSVCPEVFPATISKLVFSTVSLTTKD----SGLIFGDNP----VYSNRVVQWAEWEIEYFVRLVKE 307 (698)
Q Consensus 236 s~~I~~~~R~lr~eg~~~g~~YI~~LS~v~Ft~I~~ta~e----f~~~F~~~~----~~~S~~V~WA~~Ele~Fa~l~~R 307 (698)
-...-+-.+++=..+.. ..-...+.+- |.-++.+..+ |..+||..= ..+..|...-+.+ +..++.+
T Consensus 223 ~~~qL~eY~~iF~~~~e--~~~Ld~i~RR-y~Wfkr~L~~~e~~~~~iFP~~W~v~~~L~~~Fc~~Tr~d---L~~iL~~ 296 (383)
T PF04100_consen 223 CNKQLKEYRRIFRENDE--AASLDNIDRR-YAWFKRLLKNFEEKFANIFPPSWRVPERLCVEFCEITRKD---LSEILSK 296 (383)
T ss_pred HHHHHHHHHHHHccccc--ccchhhHHHH-HHHHHHHHHHHHhhccccCCCcCcHHHHHHHHHHHHHHHH---HHHHHhh
Confidence 55555555554212211 1222333332 2233333333 456665421 1224444444444 4566655
Q ss_pred hCCCCcchhhhHHHHHHHHHHHHHHhhHHh-c-C------------------CCcHHHHHHhhhHhHHHHHHHHHHHHHH
Q 005397 308 NAPPSETISAMRAASISVEASVNYCSLLES-Q-G------------------LKLSRLLLLLLRPYIEEVLELNFRRARK 367 (698)
Q Consensus 308 qv~ss~~~~~l~~~aeCv~ia~~hc~~L~e-~-G------------------Ldl~flL~~lLrp~ve~aL~~~~~ri~e 367 (698)
.-.... ......|++.++..=..|.. . | -.|.-.+.+.|-|++.=-++.-.+.+.+
T Consensus 297 ~~~~~d----v~~Ll~aLq~T~~FE~~L~~rF~~~~~~~~~~~~~~e~~~~~~~f~g~IS~~FepyL~iyv~~qdk~L~~ 372 (383)
T PF04100_consen 297 RKSELD----VKLLLKALQKTLEFEKELAKRFAGSTDESQEIEKKKEMKEIAENFKGIISSCFEPYLSIYVDSQDKNLSE 372 (383)
T ss_pred cCCCCc----HHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccchHHhhHhhHHHHHHHHHHHHHH
Confidence 333322 34477777777766544442 2 1 2466678889999998888888888899
Q ss_pred HHhhhhhcCCc
Q 005397 368 MVFNLEDIDES 378 (698)
Q Consensus 368 ~i~~~~~~D~W 378 (698)
.+...+++++|
T Consensus 373 ~l~~~~~~~~w 383 (383)
T PF04100_consen 373 KLDKFISEEKW 383 (383)
T ss_pred HHHHHHhhcCC
Confidence 99999999999
No 12
>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex. The COG complex comprises eight proteins COG1-8 and plays critical roles in Golgi structure and function [].; PDB: 2JQQ_A.
Probab=96.41 E-value=0.0019 Score=61.22 Aligned_cols=83 Identities=18% Similarity=0.207 Sum_probs=11.1
Q ss_pred CCCCCCCCChhhhHHHhhccCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 9 DFPSIESITPQSKIDSVYQSHTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQG 87 (698)
Q Consensus 9 ~~f~~~~Fdp~~Yv~~~~~~~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~ 87 (698)
.-|..++|||+.||.+ + .....|..++++|..+. .-.++|=.-|-.||..||.-|..+..++..+-+++.=|+.=+
T Consensus 6 ~~F~~~~Fd~d~Fl~~-~--~~~~~Le~L~~dL~~~~~~L~~~Li~lIN~dY~dFv~Ls~~L~g~~~~i~~l~~~L~~~~ 82 (133)
T PF06148_consen 6 EEFTKPDFDVDEFLSS-N--RRYVSLEDLRKDLRSYSKELKNELIELINDDYADFVSLSTNLVGMDEKIEELRKPLSQFR 82 (133)
T ss_dssp -----------------------------------------------------------------------HHHHHHHHH
T ss_pred cccCCCCCCHHHHHHH-c--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 5688999999999998 3 34557778889999999 888999999999999999999999999999998888887766
Q ss_pred HHHHHHh
Q 005397 88 ILVQDLM 94 (698)
Q Consensus 88 ~lv~~L~ 94 (698)
.-|.+..
T Consensus 83 ~~v~~~~ 89 (133)
T PF06148_consen 83 EEVESVR 89 (133)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
No 13
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases. RINT1 also functions in membrane trafficking from the endoplasmic reticulum(ER) to the Golgi complex in interphase cells [, , ]. In addition to this, the TIP-1 protein, which is involved in the retrograde transport from the Golgi to the ER []. They share a similar domain organisation with an N-terminal leucine heptad repeat rich coiled coil and an ~500-residue C-terminal RINT1/TIP20 domain, which might be a protein-protein interaction module necessary for the formation of functional complexes.; PDB: 3FHN_A.
Probab=95.86 E-value=1.9 Score=49.70 Aligned_cols=362 Identities=16% Similarity=0.198 Sum_probs=163.3
Q ss_pred HHHhhhHHHHHHHHHh----hh----CC-CCCchhHHHHHHHHHHHHHHHHHHhhCCCCcchhhhHHHHHHHHHHHHHHh
Q 005397 263 KLVFSTVSLTTKDSGL----IF----GD-NPVYSNRVVQWAEWEIEYFVRLVKENAPPSETISAMRAASISVEASVNYCS 333 (698)
Q Consensus 263 ~v~Ft~I~~ta~ef~~----~F----~~-~~~~~S~~V~WA~~Ele~Fa~l~~Rqv~ss~~~~~l~~~aeCv~ia~~hc~ 333 (698)
.-||+.|.+..+++.. ++ .+ ...+.++...|++.=+..-..-++..++...... ..++..|.-++..=.
T Consensus 31 Ew~f~~i~~~~~~~~~~l~~~iq~~~~~~~~~~~~~~~~fi~~ll~~~~~Kl~~~l~~~~~~~--~~l~HlI~e~~~FD~ 108 (494)
T PF04437_consen 31 EWYFTFILKWIRDHRDFLEECIQPLLDENGLTYIDAREEFIRGLLPPVREKLRSDLPELLDDP--SLLSHLIDEILSFDK 108 (494)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHH-BGGTB-HHHHHHHHHHHHHHHHHHHHHHHH--TTS-H--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHcCHHHHhcCCccccHHHHHHHHHHHHHHHHHHHHHHhhccCh--hHHHHHHHHHHHHHH
Confidence 5788888888887732 22 11 1235678888888877777777777775443333 447888877777766
Q ss_pred hHHhc-CCCc-H--HHHHHhhhHhH-----HHHHHHHHHHHHHHHhhhhhcCCccccCCCCCCCCcccCCCCceecchhH
Q 005397 334 LLESQ-GLKL-S--RLLLLLLRPYI-----EEVLELNFRRARKMVFNLEDIDESLLLSPHFMSPLSLFATSSDSMLVDSG 404 (698)
Q Consensus 334 ~L~e~-GLdl-~--flL~~lLrp~v-----e~aL~~~~~ri~e~i~~~~~~D~W~~~~~~~~~~~s~~~~~~~~~LT~S~ 404 (698)
.|.+. |.+- . -.+..+..|.. +-=.+...+|..+ ...++|.|.+.+-- ..++....+.|.+|
T Consensus 109 ~L~~~~~y~~d~~~~~~~vL~~~~~~~~Wl~~E~~~a~~r~~~---i~~s~~aw~~~~~~------~~~~~~~~k~t~~A 179 (494)
T PF04437_consen 109 ELRSLYGYPGDWQGSTLDVLCQPDWFDRWLNAEKEFALERFDE---IISSPDAWQIDYDD------VEADSDELKPTKSA 179 (494)
T ss_dssp HHHHTS---S------CGGGS-HHHHHHHHHHHHHHHHHHHH------------------------HTTSSGGGG-GGHH
T ss_pred HHHHHcCCCCccchhHHHHhcchHHHHHHHHHHHHHHHHHHhh---hcccchhhhhhhcc------ccCCchhhcchHHH
Confidence 66653 4333 0 01111222221 1111122233332 23468899876421 11344567899999
Q ss_pred HHHHHHHHHHHhhcccccccchhhhHH-HHHHHHHHHHHHHHHHhCCCC----CCCccccccccCcccccCChHHHhH-H
Q 005397 405 SRFMHIVEEILEQLTPLVVLHFGGNIL-TRISQLFDKYLDALNRALPGP----SDDDNLTELKETIPFRAETDSEQLS-L 478 (698)
Q Consensus 405 ~~F~~~vq~fled~~~L~~~~L~~~il-~~l~~lF~~yv~~L~~al~~~----~~~~~~~e~~~~~~~~a~t~~qq~a-i 478 (698)
.+|++++..+.+.+.||.+....--.+ +.=..|++.|.+.|...+..- +-..... ....-+++. +
T Consensus 180 ~~~~~Ll~~it~ry~~L~~~~~rl~Fl~~iql~lld~~~~~L~~~~~~~~~~~s~~~~~~---------~~~~l~~l~~~ 250 (494)
T PF04437_consen 180 ERFVKLLESITDRYRPLPSLSHRLRFLIDIQLPLLDDYHDRLSQSLEAFESSTSTLASLS---------GDSGLERLCKI 250 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHH---GG--GHHHHHHHHHHTHHHHHHHHHHHHHT----SCEE---------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhcc---------CCchHHHHHHH
Confidence 999999999999999998876554333 333446666666555543210 0000000 112234444 8
Q ss_pred HHHHHHHHhhhhhhhhhhhcC------CCCCCcccccCCCC------CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 479 LGVAFTIMDELLPNTVSKVWN------PKNESKEVGNENIA------PNASTTTELKDWKRHLQHSFDKLRDHFCRQYVL 546 (698)
Q Consensus 479 l~Na~~l~d~Llp~~~~k~~~------~~~~~~~~~~~~~~------~~~~~~~e~~e~~~~lq~~~~~lr~~fc~q~~~ 546 (698)
+.+|.++...|---...-+|= ..+. + ...++.. .+...........+...++.+++-+.+++.+=-
T Consensus 251 lnsa~yi~~~L~eW~e~~~Flq~~~~~~~~~-~-~~~~~~~~~~~~~~~siFde~i~~y~~l~~~~~~~iv~~v~~~~k~ 328 (494)
T PF04437_consen 251 LNSANYIENVLREWSEDVFFLQMRAKESESS-N-NSLEDIANETSSEEGSIFDETISAYEKLRKRMLESIVDRVVKEFKA 328 (494)
T ss_dssp HHHHHHHHHHHHHHCTSHHHH--------------HHHHHHHHHTT--S-TTHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeeehhhccchhhc-c-cccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987653333322221 1000 0 0000000 011111233334444455555555555443322
Q ss_pred Hhh-ccccCccccccccc--ccCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHh
Q 005397 547 SFI-YSREGKTRLNGQIY--LSGNEEYTQWDSDPLPSLPFQALFAKLQQLATVAGDVLLGKEKLQKILLARLTETVVMWL 623 (698)
Q Consensus 547 ~~i-~~~~~~~~l~~~~y--~~~~~~~~~~~~~~~Ps~~Fq~lf~~l~~la~~~~d~~~g~e~~~~~ll~rl~etvv~~l 623 (698)
.+= |.... -+ +.+..+... +-||+-+-..+..|++.=......|... ....+-+++.+.+..|
T Consensus 329 ~lk~Y~k~~-------~W~~~~~~~~~~~----~~~S~el~~~L~~L~~~L~~L~~~L~~~--~f~~i~r~ia~~l~~~- 394 (494)
T PF04437_consen 329 SLKAYFKRS-------QWSSIESPSDSSP----LSPSPELVPALSLLRSRLSFLERSLPPA--DFRRIWRRIASKLDDY- 394 (494)
T ss_dssp HTHHHHT---------GGGT-----------------GGGHHHHHHHHHHHHHHHTS--HH--HHHHHHHHHHHHHHHH-
T ss_pred HHHHHhCcc-------CCCCccccccccc----CCCCHHHHHHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHH-
Confidence 211 32211 22 111111112 2378766666666665555444443322 2344555555555554
Q ss_pred cCcchhhHhhhcCCCCCCccchhhhhhHHHHHHHHHHhCCCCChh
Q 005397 624 SAEQEFWAVFEDESSPIQPLGLQQLILDMHFTVEIARFAGYPSRH 668 (698)
Q Consensus 624 s~~~~fw~~~e~~~~~~~~~glqq~~Ldm~f~~~~a~~g~y~s~~ 668 (698)
+|+.|=.. ..|.+.|..||..||+.+..+ ++.|..++
T Consensus 395 -----l~~~Il~~-n~Fs~~Ga~Ql~~D~~~L~~~--~~~~~~~p 431 (494)
T PF04437_consen 395 -----LWESILMS-NKFSRAGAAQLQFDMRALFSV--FSQYTPRP 431 (494)
T ss_dssp -----HHHTTTTT-S-B-HHHHHHHHHHHHHHHTT--S--TTSGG
T ss_pred -----HHHHhhhc-CeeChhHHHHHHHHHHHHHHH--HHhhccCH
Confidence 55543333 388999999999999887665 46675544
No 14
>KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism]
Probab=95.50 E-value=5 Score=47.62 Aligned_cols=265 Identities=15% Similarity=0.132 Sum_probs=153.4
Q ss_pred HHHhhccCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 005397 22 IDSVYQSHTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGILVQDLMTGVCRQ 100 (698)
Q Consensus 22 v~~~~~~~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~~~~~s~ 100 (698)
++.++..++-++||...++++.-= +--|+||.-|=.-|..-|++|.+|.+|-+--..|..-+..-..-.++|-.
T Consensus 10 vd~LFethsvsEIr~ve~~ir~~iE~KrEELRqmVGeRYRDLleAADtI~hM~sla~~L~~~I~~t~~ncrsL~a----- 84 (863)
T KOG2033|consen 10 VDTLFETHSVSEIREVEKKIRSVIEGKREELRQMVGERYRDLLEAADTIRHMCSLADKLASDIANTRVNCRSLHA----- 84 (863)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccc-----
Confidence 567788889999999999998777 88999999999999999999999999876655555554444443444321
Q ss_pred hhhhhhcCCCcccccCCCcccccC-CC---CCC-ChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhhcccc-ccCCCC
Q 005397 101 LEELSVANGNIDESLSDPQKIELE-DP---LPN-EIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERNFPEL-RSSGEA 174 (698)
Q Consensus 101 ~~~w~~~~~~~~~~~~~~e~~~~d-~~---~~~-~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~l~~~-~~~~~~ 174 (698)
++.. .++...... -. ..+ -..+.+.+.||.+=-++...+|=+|..+.-.++..-..+ +..+
T Consensus 85 --------~svA---~tp~raeqnp~~e~~Yg~aaqVKyLv~~PE~IWg~lD~s~fl~At~ly~~~~Hlq~~liqLds-- 151 (863)
T KOG2033|consen 85 --------NSVA---KTPGRAEQNPAGEHLYGTAAQVKYLVSSPELIWGHLDSSEFLDATVLYCMVEHLQKQLIQLDS-- 151 (863)
T ss_pred --------cccc---CCcchhhcCchhhHHHHHHHHHHHHHhCHHHhhccccccchHHHHHHHHHHHHHHHHHhhcCC--
Confidence 1111 111100000 00 000 134688999999999999999999999988887544422 1111
Q ss_pred ChHHHHhHH---HHHHHHH---HHHHHHHHHHhcCCCCChHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHHHhhhhc
Q 005397 175 SSAQASSFK---SDFLKRK---AMVEDQLVKITEQPSIGILELKKALTDLIKLG--KGPLAHQLLLKYYASRLQRSFEVY 246 (698)
Q Consensus 175 ~~~~~~~lk---~~i~eR~---~~La~~L~~~~~~~s~~~~~~rravs~L~RLG--~~~~A~~lfL~~rs~~I~~~~R~l 246 (698)
++.....+- .++..-+ ..+-..-...+.++...-.++-.++..+.=|. +.+++-++||..|.+.|.+-+..
T Consensus 152 ss~ll~nfP~l~~Qw~a~r~F~stI~q~s~~~Lld~glsd~atvdaL~aiaLLdesdpsqvLelFL~~Rk~~il~lLn~- 230 (863)
T KOG2033|consen 152 SSMLLKNFPALTNQWVATRPFHSTIEQQSCSTLLDIGLSDWATVDALAAIALLDESDPSQVLELFLEKRKEHILHLLND- 230 (863)
T ss_pred CcHHHhhcHHHHHHHHHHhhHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhc-
Confidence 111122221 1111000 11111122234455555556655554444444 46789999999999999888775
Q ss_pred ccCCCCCCccccchhhHHHhhhHHHHHHHHHhhh-------------------CCCCCchhHHHHHHHHHHHHHHHHHHh
Q 005397 247 LPSSSVCPEVFPATISKLVFSTVSLTTKDSGLIF-------------------GDNPVYSNRVVQWAEWEIEYFVRLVKE 307 (698)
Q Consensus 247 r~eg~~~g~~YI~~LS~v~Ft~I~~ta~ef~~~F-------------------~~~~~~~S~~V~WA~~Ele~Fa~l~~R 307 (698)
.| .+|+.-...++.++ +.|+.|..---++| ...+.+-+.+-.|-+.=.+.-+...-|
T Consensus 231 ~p---~~~~~vka~il~~v-~vl~~Tl~qv~elfl~~~Llfstle~c~gq~~~~~i~emE~~l~~sf~~lpesim~f~pr 306 (863)
T KOG2033|consen 231 GP---SEPRRVKATILNIV-DVLKKTLAQVEELFLHGELLFSTLEVCNGQYKCELIREMEADLAYSFEKLPESIMDFVPR 306 (863)
T ss_pred CC---CccchhHHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhcCCccCCCCchHHHHHHHHHHHhhHHHHhhccch
Confidence 23 34433333333221 12222222222222 112334467777888777777777777
Q ss_pred hC
Q 005397 308 NA 309 (698)
Q Consensus 308 qv 309 (698)
|.
T Consensus 307 ~l 308 (863)
T KOG2033|consen 307 HL 308 (863)
T ss_pred hc
Confidence 76
No 15
>KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.08 E-value=11 Score=45.78 Aligned_cols=608 Identities=13% Similarity=0.097 Sum_probs=299.3
Q ss_pred CCCCCCChhhhHHHhhccCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Q 005397 11 PSIESITPQSKIDSVYQSHTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHI--SAQG 87 (698)
Q Consensus 11 f~~~~Fdp~~Yv~~~~~~~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lL--seQ~ 87 (698)
|.+++|+|.=|+.+.-+..+-++++.--..|.--. .-.+-=+.-|-.|.-.||..=.=+.+++.-+-+-.+=. +.-.
T Consensus 166 l~se~Fspkw~L~enH~~ts~edLk~~i~~lK~~~n~~~~~~~~lvK~n~~~fi~~~dtl~~i~~kLe~~e~~~~gs~t~ 245 (934)
T KOG2347|consen 166 LRSEHFSPKWFLLENHQDTSFEDLKAGILNLKRDLNGRKEGSLQLVKDNFDSFISCKDTLDNIHQKLERGEEDPHGSGTT 245 (934)
T ss_pred cccccCChhHHHHhhhhhccHHHHHHHHHHHHHhhcchhhhhHHHHhcchhHHHHHHHHHHHHHHHHhccccCccchHHH
Confidence 79999999999988765566555553332222111 12222233456788999998888888887776621111 1111
Q ss_pred HHHHHHhhhhhhhhh-hhhhcCCCcccccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhhcc
Q 005397 88 ILVQDLMTGVCRQLE-ELSVANGNIDESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERNFP 166 (698)
Q Consensus 88 ~lv~~L~~~~~s~~~-~w~~~~~~~~~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~l~ 166 (698)
. +.+.+..+.+... -|+.-.++.+.+.++-... + .. -.-+-+--+|-.++--|.-+++|-++.=-++++....
T Consensus 246 ~-l~n~i~~~~s~ad~iF~~vl~Rk~~ADstRsvL---~-~l-qRfkfLFnLp~~ier~i~kGeYd~vvndYekAKsl~~ 319 (934)
T KOG2347|consen 246 K-LENCIKNSTSRADLIFEDVLERKDKADSTRSVL---G-VL-QRFKFLFNLPSNIERSIKKGEYDTVVNDYEKAKSLFG 319 (934)
T ss_pred H-HHHHHHHhhhHHHHHHHHHHhcccccccHHHHH---H-HH-HHHHHHHhcchhhhhHhhcCCceeeccchhhHHHhhc
Confidence 1 1222221111111 1222112222110100000 0 00 0234667788888888888888888888888887665
Q ss_pred ccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHhcCCc-c----------hHHHHHHHHH
Q 005397 167 ELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKITEQPSIGILELKKALTDLIKLGKG-P----------LAHQLLLKYY 235 (698)
Q Consensus 167 ~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~~~~~s~~~~~~rravs~L~RLG~~-~----------~A~~lfL~~r 235 (698)
...- + .+..+-+-|+.|...+=..|.+-+.++...-...++.|.+|.-|.-. + +=..=+++.+
T Consensus 320 ~t~v-----~-~Fkk~l~Eve~~m~~~k~~l~~kli~~p~t~~dq~~~ir~L~~L~~~~dP~wq~I~~q~k~i~~L~~s~ 393 (934)
T KOG2347|consen 320 KTEV-----N-LFKKVLEEVEKRMQSFKETLYRKLIDTPITFEDQSKLIRYLSELEPESDPVWQCIGVQNKRILGLLESC 393 (934)
T ss_pred cccc-----H-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhCcccCchhhhccccchHHHhhhhhc
Confidence 4211 1 23333344666666666677777777777777788888888755322 1 1112233333
Q ss_pred HHHHHHhhhhcc-------c--CC------------------C------CCC--ccccchhhHHHhhhHHHHHHHHHhhh
Q 005397 236 ASRLQRSFEVYL-------P--SS------------------S------VCP--EVFPATISKLVFSTVSLTTKDSGLIF 280 (698)
Q Consensus 236 s~~I~~~~R~lr-------~--eg------------------~------~~g--~~YI~~LS~v~Ft~I~~ta~ef~~~F 280 (698)
....-+++..++ | .| . -.+ ..||..|..+..+.+-.-=+--...|
T Consensus 394 ~~~~~~~l~~~~~~~~~~q~s~~g~~~S~t~s~~~~~~~q~~~~~~~~~k~~~r~~fiekL~~l~~s~lP~fWKl~~sy~ 473 (934)
T KOG2347|consen 394 WDDHVARLEGLRLSDKWTQPSQNGVHLSDTASSMENSQNQVINEWKIREKTPERVNFIEKLTDLLLSQLPIFWKLAISYF 473 (934)
T ss_pred chhHHHHhhcccccccccchhhcccccCchHHHHhhhhhhhccchhhhhhchHHHHHHHHHHHHHHHhCcHHHHHHHHHh
Confidence 333333333332 0 01 0 001 35888888877766543222222333
Q ss_pred CC-----CCCch-hH--------HHHHHHHHHHHH-----HHHHHhhCCCCcch---------hh-hHHHHHHHHHHHHH
Q 005397 281 GD-----NPVYS-NR--------VVQWAEWEIEYF-----VRLVKENAPPSETI---------SA-MRAASISVEASVNY 331 (698)
Q Consensus 281 ~~-----~~~~~-S~--------~V~WA~~Ele~F-----a~l~~Rqv~ss~~~---------~~-l~~~aeCv~ia~~h 331 (698)
.. .+-+- |- +|+=+.+.+-.. ...+..++++-.+. .. +.-.+.|++.++.-
T Consensus 474 ~G~~~~~~sq~~~s~~~k~~qn~~~~~~~~v~~sLv~~~~~~~~t~s~~~~~a~~~~~~~dis~~~~~~~~~~i~~vr~~ 553 (934)
T KOG2347|consen 474 NGDLFSPSSQVQDSDINKMEQNNEVREKREVFHSLVELALMDRFTLSQSDGKAKSPFGDADISRSLLPWMPLAIKTVRKA 553 (934)
T ss_pred cccccCcccccChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccccCCcCCcccccccCccchhHHHHhHHH
Confidence 22 11010 11 111111111111 11111122111000 01 12247899999999
Q ss_pred HhhHHhcCCCcHHHHHHhhhHhHHHHHHHHH-------HHHHHHHhhhhhcCCccccCCCCCCCCcccCCCCce-ecchh
Q 005397 332 CSLLESQGLKLSRLLLLLLRPYIEEVLELNF-------RRARKMVFNLEDIDESLLLSPHFMSPLSLFATSSDS-MLVDS 403 (698)
Q Consensus 332 c~~L~e~GLdl~flL~~lLrp~ve~aL~~~~-------~ri~e~i~~~~~~D~W~~~~~~~~~~~s~~~~~~~~-~LT~S 403 (698)
|.-|++-- ++.+.+|+|-.+-..+.++ ++-.|.|+.++..+.|.+.+....-+.- ...++.- ..+-|
T Consensus 554 ~~sL~ale----~~P~~~lq~Iq~li~~~rl~~~~~~~~~~~e~is~l~~re~W~~~s~~~rn~s~-t~LP~~fEt~ivs 628 (934)
T KOG2347|consen 554 CQSLEALE----SLPHDALQPIQKLITEARLQCLSSWMRASTERISTLAKRETWIPDSILERNRSI-TYLPLAFETVIVS 628 (934)
T ss_pred HHHHHHhh----hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcccch-hhhhHHHHHHHhh
Confidence 98887643 3333566776666555444 4456778888899999988432221100 0000000 00000
Q ss_pred HH-HHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHh---CC---CC-----CCCccccccccCcc-----
Q 005397 404 GS-RFMHIVEEILEQLTPLVVLHFGGNILTRISQLFDKYLDALNRA---LP---GP-----SDDDNLTELKETIP----- 466 (698)
Q Consensus 404 ~~-~F~~~vq~fled~~~L~~~~L~~~il~~l~~lF~~yv~~L~~a---l~---~~-----~~~~~~~e~~~~~~----- 466 (698)
+. .-..++..+=-.++..--+++...+-+.+..+-......+.+- ++ -+ ..-++ +.+.++..
T Consensus 629 sl~q~~~~~l~~~gEa~~f~~~~~~~~i~el~I~~~~~fl~c~e~L~~h~~~~~~~~~q~~t~~~~-~~~~~~~~qed~~ 707 (934)
T KOG2347|consen 629 SLEQVNSVLLSFEGEAALFEQPDMQAEIEELSISVRLAFLNCFEDLAIHLEQIGADLSQLTTQIEG-QNGFSNAHQEDIS 707 (934)
T ss_pred hHHhhhhHHhhccccccccCchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCchhhccccccc-ccccccccchhhh
Confidence 00 0001111111111111111222222222222211111111100 00 00 00000 11111111
Q ss_pred cc---cCChHHH-hH-HHHHHHHHHhhhhhhhhhhh---cCCCCCCcccccCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 005397 467 FR---AETDSEQ-LS-LLGVAFTIMDELLPNTVSKV---WNPKNESKEVGNENIAPNASTTTELKDWKRHLQHSFDKLRD 538 (698)
Q Consensus 467 ~~---a~t~~qq-~a-il~Na~~l~d~Llp~~~~k~---~~~~~~~~~~~~~~~~~~~~~~~e~~e~~~~lq~~~~~lr~ 538 (698)
+- +..++.| += +++|--+.-+.+.|.....+ |.. + . . +...-...+.....+|..
T Consensus 708 ~ns~~~~~~~~qrlLi~LsN~~yc~~~~~~~l~n~fk~~~~~----~--------~-k----~iE~is~s~s~l~s~l~e 770 (934)
T KOG2347|consen 708 INSADSVVDPEQRLLIVLSNIGYCKDILAPTLLNIFKYTWLL----S--------R-K----NIEDISMSLSGLGSKLFE 770 (934)
T ss_pred cccccccCChhheeEEEeccHHHHHHHHHHHHHHHHHHHhhc----c--------c-c----cHHHHHHHHHHHHHHHHH
Confidence 10 1124444 43 88996665556666655444 322 1 0 0 122233466777777777
Q ss_pred HHHHHHHHHhhccccCcccccccccccCCccCCCCCCCCCCCHHHHH---HHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 005397 539 HFCRQYVLSFIYSREGKTRLNGQIYLSGNEEYTQWDSDPLPSLPFQA---LFAKLQQLATVAGDVLLGKEKLQKILLARL 615 (698)
Q Consensus 539 ~fc~q~~~~~i~~~~~~~~l~~~~y~~~~~~~~~~~~~~~Ps~~Fq~---lf~~l~~la~~~~d~~~g~e~~~~~ll~rl 615 (698)
+|-...+--+.-+ +.+.||..+ -+|..- |+ +|+. +=+-|--|--+-+++|.+ .+.|+.++
T Consensus 771 ~Yi~~k~~~i~~a------lEp~~~~~~----~~W~~~--~~-~~~irdYa~E~l~~lV~VhaEvf~i----ap~Ll~ki 833 (934)
T KOG2347|consen 771 NYIEDKADPIRGA------LEPYLLDGG----IQWGMA--PP-VKGIRDYAKEALHNLVAVHAEVFAI----APQLLDKI 833 (934)
T ss_pred HHHHHhhhhhhhc------ccchhhccc----cccccC--CC-ccchHHHHHHHHHHHHHHHHHHHhc----CHHHHHHH
Confidence 7776666554433 333366332 457633 33 4553 444444444555567665 67899999
Q ss_pred HHHHHHHhcCcchhhHhhhcCCCCCCccchhhhhhHHHHHHHHHHhCCCCChhHHHHHH
Q 005397 616 TETVVMWLSAEQEFWAVFEDESSPIQPLGLQQLILDMHFTVEIARFAGYPSRHVHQIAS 674 (698)
Q Consensus 616 ~etvv~~ls~~~~fw~~~e~~~~~~~~~glqq~~Ldm~f~~~~a~~g~y~s~~~~~~~~ 674 (698)
.+++|.-+|+ +|-..+..-...+.+.|.=|.++|..|+=++- |.|.......-++
T Consensus 834 L~~~ve~i~d--~L~~l~~~~v~s~S~nG~lQi~vdl~~l~~~l--~~Ylt~~a~~slk 888 (934)
T KOG2347|consen 834 LGETVEGISD--ELLRLFSCDVQSFSANGALQIMVDLEYLEDVL--GPYLTKDAKESLK 888 (934)
T ss_pred HHHHHHHHHH--HHHHHhhhhhhccCCCcceeeeeeHHHHHHHH--HHhccHHHHHHHH
Confidence 9999999999 88777766678899999999999999999987 8999866554444
No 16
>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking. Subunit 5 is located in the smaller, B lobe, together with subunits 6-8, and has been shown to bind subunits 1 and 7 [].
Probab=95.02 E-value=0.3 Score=46.49 Aligned_cols=85 Identities=13% Similarity=0.059 Sum_probs=65.3
Q ss_pred CCCCCCCChhhhHHHhhcc-----CCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 10 FPSIESITPQSKIDSVYQS-----HTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHI 83 (698)
Q Consensus 10 ~f~~~~Fdp~~Yv~~~~~~-----~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lL 83 (698)
-|-+++|||..|..+++.+ .++-++..--++|..=- .....|++.|..||...+.-+.-|..+|+.+-.++.-+
T Consensus 2 ~fl~~dFd~~~fan~ll~~~~~~~~~~ld~~~~l~kL~~~i~eld~~i~~~v~~~~~~LL~q~~~~~~~~~~l~~v~~~v 81 (132)
T PF10392_consen 2 AFLSPDFDPVQFANDLLKSTNNNSDSELDISTPLKKLNFDIQELDKRIRSQVTSNHEDLLSQASSIEELESVLQAVRSSV 81 (132)
T ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4779999999999999983 22455555555554444 67789999999999999999999999999888888777
Q ss_pred HHHHHHHHHHh
Q 005397 84 SAQGILVQDLM 94 (698)
Q Consensus 84 seQ~~lv~~L~ 94 (698)
..=..-++-|.
T Consensus 82 ~~L~~s~~RL~ 92 (132)
T PF10392_consen 82 ESLQSSYERLR 92 (132)
T ss_pred HHHHHHHHHHH
Confidence 66444444443
No 17
>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.08 E-value=13 Score=43.29 Aligned_cols=74 Identities=16% Similarity=0.193 Sum_probs=49.3
Q ss_pred CCCCCCCCChhhhHHHhhccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 9 DFPSIESITPQSKIDSVYQSHTEKGIR-KLCCELLDLKDAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISA 85 (698)
Q Consensus 9 ~~f~~~~Fdp~~Yv~~~~~~~~ek~lr-~~~~~L~~lk~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLse 85 (698)
..|-.+|||.+.|+...=+...=+.|| .++.+|..|+ ..|-.-+-+.|+.|.--|.-...|..-+.+++.=|..
T Consensus 26 ~eFmkedFdve~f~s~~R~~v~letLrddLrlylksl~---~aMieLIN~DYADFVnLStnLVgld~aln~i~qpL~q 100 (705)
T KOG2307|consen 26 TEFMKEDFDVERFMSLARQKVDLETLRDDLRLYLKSLQ---NAMIELINDDYADFVNLSTNLVGLDDALNKIEQPLNQ 100 (705)
T ss_pred hhhccccCCHHHHHHHHhccCCHHHHHHHHHHHHHHHH---HHHHHHHhhhHHHHHhhhhhhccHHHHHHHHHhHHHH
Confidence 468899999999998765445544554 3555666666 2334446678999998887766666655555544444
No 18
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane. The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0000145 exocyst; PDB: 2A2F_X.
Probab=89.70 E-value=18 Score=39.50 Aligned_cols=99 Identities=14% Similarity=0.187 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHHHHHHHHHhcCcchhhHhh-hcCCCCCCccchhhhhhHHHHHHH
Q 005397 579 PSLPFQALFAKLQQLATVAGDVLLGKEKLQKILLARLTETVVMWLSAEQEFWAVF-EDESSPIQPLGLQQLILDMHFTVE 657 (698)
Q Consensus 579 Ps~~Fq~lf~~l~~la~~~~d~~~g~e~~~~~ll~rl~etvv~~ls~~~~fw~~~-e~~~~~~~~~glqq~~Ldm~f~~~ 657 (698)
||.--+.|-.-|+.+=+.+--+|-.. +...+.. .....||+ .|++.+ .++++.+-+.|++||-+|++|+-.
T Consensus 177 ps~yi~dli~fL~~~f~s~l~~LP~~--v~~~~~~----~a~~his~--~l~~~Ll~~~vk~in~~al~~~~~Dv~~lE~ 248 (311)
T PF04091_consen 177 PSDYINDLIQFLETTFSSTLTNLPPS--VKQLVYF----SACDHISE--SLLDLLLSDDVKRINMNALQNFDLDVKYLES 248 (311)
T ss_dssp --HHHHHHHHHHHHHHHTTTTTSH-H--HHHHHHH----HHHHHHHH--HHHHHHT---------TTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCHH--HHHHHHH----HHHHHHHH--HHHHHhcCCcccccCHHHHHHHHHHHHHHHH
Confidence 88877788888887765544443332 2222222 23334444 555553 366788899999999999999999
Q ss_pred HHHhC--------CCCC--hhHHHHHHHHHHHHHHHHh
Q 005397 658 IARFA--------GYPS--RHVHQIASAIIARAIRTFS 685 (698)
Q Consensus 658 ~a~~g--------~y~s--~~~~~~~~~~i~~a~~~~~ 685 (698)
||..- .-.+ ..++|.++=+...-.+.|.
T Consensus 249 f~~~~~~~~~~~~~L~~~F~eLrQlvdLl~s~~~~~y~ 286 (311)
T PF04091_consen 249 FADSLPVPGNNIPSLRETFAELRQLVDLLLSDDWEEYL 286 (311)
T ss_dssp HHTT-SSSS--SSTTGGGGHHHHHHHHHHH--------
T ss_pred HHHhCcCcccccccHHHHHHHHHHHHHHHhcCCHHHHh
Confidence 99544 2222 5677888888777777773
No 19
>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=89.42 E-value=15 Score=44.82 Aligned_cols=161 Identities=14% Similarity=0.075 Sum_probs=108.6
Q ss_pred HHhhccCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005397 23 DSVYQSHTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFL-------RLSEEVVETEHELMELRKHISAQGILVQDLM 94 (698)
Q Consensus 23 ~~~~~~~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI-------~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~ 94 (698)
+++.-+.+...+..-.+.|.+-= .+...|+.-|..||.+|= +++.+|..--.....+|+.|-+.+.++++=.
T Consensus 37 ~nL~~Se~~e~re~ek~~Led~Yk~~~a~Lq~lv~~H~q~~t~~i~sy~~i~s~It~~rerI~~vK~~L~~~k~ll~~~r 116 (982)
T KOG3691|consen 37 RNLVGSEDTEPRETEKERLEDSYKEFGAALQELVHTHKQDFTTGISSYGEISSGITNCRERIHNVKNNLEACKELLNTRR 116 (982)
T ss_pred HhhccCCcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 34444444455555555554443 677778888888887764 5889999999999999999999999986533
Q ss_pred hhhhhhhhhhhhcCCCcccccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhhccc-cccCCC
Q 005397 95 TGVCRQLEELSVANGNIDESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERNFPE-LRSSGE 173 (698)
Q Consensus 95 ~~~~s~~~~w~~~~~~~~~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~l~~-~~~~~~ 173 (698)
+.. -..|..+..-.. - +..+ +...-+..+|+.+.-+||-++|-.|-.++.++...+.. ++.
T Consensus 117 deL---qklw~~~~q~K~----V--i~vL------~eieEl~qvPqkie~~i~keqY~~Asdll~~~~~~lng~L~~--- 178 (982)
T KOG3691|consen 117 DEL---QKLWAENSQYKK----V--IEVL------KEIEELRQVPQKIETLIAKEQYLQASDLLTRAWELLNGPLDG--- 178 (982)
T ss_pred HHH---HHHHHhhhhHHH----H--HHHH------HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchh---
Confidence 211 112322110000 0 0000 12356788999999999999999999999999877753 111
Q ss_pred CChHHHHhHHHHHHHHHHHHHHHHHHHhcC
Q 005397 174 ASSAQASSFKSDFLKRKAMVEDQLVKITEQ 203 (698)
Q Consensus 174 ~~~~~~~~lk~~i~eR~~~La~~L~~~~~~ 203 (698)
.. .+..++..+.-+...|-+.|.+++.+
T Consensus 179 -VE-gLs~l~~ele~~~~~L~~~L~eELv~ 206 (982)
T KOG3691|consen 179 -VE-GLSDLRSELEGLLSHLEDILIEELVS 206 (982)
T ss_pred -hh-hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 26788888999999999988877554
No 20
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex. Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner [].; PDB: 2FJI_2.
Probab=82.84 E-value=72 Score=37.24 Aligned_cols=380 Identities=12% Similarity=0.103 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhc--ccCCCCCCccccchhhHHHhhhHHHHHHHHHhhhCCCCCchhHHHHHHHHHHHHHHH
Q 005397 226 LAHQLLLKYYASRLQRSFEVY--LPSSSVCPEVFPATISKLVFSTVSLTTKDSGLIFGDNPVYSNRVVQWAEWEIEYFVR 303 (698)
Q Consensus 226 ~A~~lfL~~rs~~I~~~~R~l--r~eg~~~g~~YI~~LS~v~Ft~I~~ta~ef~~~F~~~~~~~S~~V~WA~~Ele~Fa~ 303 (698)
.=++.+++.=...+..++.+. +.++......+...+. .++.-+.-+-..-..|||..-..+..++.|-...+..+..
T Consensus 77 ~~r~~~~~~l~~sv~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~DL~~v~~~~~~cfPp~~~I~~~y~~~YH~~l~~~l~ 155 (566)
T PF06046_consen 77 NWRQKFFEALRESVEERFEQAEEREENKSWLARHLEALR-WVLEDLQVVKDDVVPCFPPEYDIFNTYVSMYHNALSDHLQ 155 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHH-HHHHHHHHHHHhCcccCCCCChHHHHHHHHHHHHHHHHHH
Confidence 335555555555555555522 1122222235788888 8888888888888899965434456666665555555444
Q ss_pred HHHhhCCCCcchhhhHHHHHHHHHHHHHHhhHHhcCCCcHHHHHHhhhHhH-HHHHHHHHHHHHHHHhhhh------hcC
Q 005397 304 LVKENAPPSETISAMRAASISVEASVNYCSLLESQGLKLSRLLLLLLRPYI-EEVLELNFRRARKMVFNLE------DID 376 (698)
Q Consensus 304 l~~Rqv~ss~~~~~l~~~aeCv~ia~~hc~~L~e~GLdl~flL~~lLrp~v-e~aL~~~~~ri~e~i~~~~------~~D 376 (698)
-+.. ...+. +.+ ..-+.-...|-+.|...|+.....+..+|-+.. ++.++.|..+++..++.-. ..+
T Consensus 156 ~l~~--~~l~~-~~l---l~ll~W~~~Y~~~m~~~~l~~~~~l~plL~~~~~~~L~~~Yl~~~~~~~~eW~~n~l~~E~~ 229 (566)
T PF06046_consen 156 ELIS--PDLEA-NDL---LSLLSWVNTYPSIMGHPDLAIKEQLGPLLPDEKLEELEDDYLSRIQKKMKEWMDNILEQEVK 229 (566)
T ss_dssp ------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcc--CCCCH-HHH---hhheechhhChHhhcCCcccchhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3311 11111 111 111122345677999998886556665555554 6666788888877765422 445
Q ss_pred CccccCCCCCCCCcccCCCCceecchhHHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHhCCCCCCCc
Q 005397 377 ESLLLSPHFMSPLSLFATSSDSMLVDSGSRFMHIVEEILEQLTPLVVLHFGGNILTRISQLFDKYLDALNRALPGPSDDD 456 (698)
Q Consensus 377 ~W~~~~~~~~~~~s~~~~~~~~~LT~S~~~F~~~vq~fled~~~L~~~~L~~~il~~l~~lF~~yv~~L~~al~~~~~~~ 456 (698)
+|.-..+|.. ++...--|+..+-+..|+.+-++-+..=....+...+++.+......|...+...+.....+-
T Consensus 230 ~w~~~~~Pe~-------~~dg~y~t~~~~difqmi~qql~va~~~l~~~v~~~v~~~~~~~l~~~~~~~~~~~~~~~~~~ 302 (566)
T PF06046_consen 230 DWSEEKEPEE-------DEDGYYHTPLPVDIFQMINQQLDVASESLQGKVLQRVLEELANFLKSYQDAWQEFKEEHFKDR 302 (566)
T ss_dssp HHHC-S--EE--------TTS-EE-HHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcccCCCCc-------CCCCCeecCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6776444442 112245567777788888877776633333333334445555666677666655542211000
Q ss_pred ccc-ccccCcccccCChHHHhHHHHHHHHHHhhhhhhhhhhhcCCCCCCcccccCCCCCCCCcchhhHHHHHHHHHHHHH
Q 005397 457 NLT-ELKETIPFRAETDSEQLSLLGVAFTIMDELLPNTVSKVWNPKNESKEVGNENIAPNASTTTELKDWKRHLQHSFDK 535 (698)
Q Consensus 457 ~~~-e~~~~~~~~a~t~~qq~ail~Na~~l~d~Llp~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~e~~~~lq~~~~~ 535 (698)
... +..+. .-..+--+|+..|+....+ .......++.+.- +++.......=...+...++.
T Consensus 303 ~~~~~~~~~----~~~~eyliA~~N~~~~~~~-~~~~l~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 364 (566)
T PF06046_consen 303 SSVKPKENP----PGYLEYLIAVANNCLRCRD-YVESLEQKFEEKV-------------SQKYMERISSDLEELMDGFDD 364 (566)
T ss_dssp HHHHHCC------S-HHHHHHHHHHHHHHHHH-HHHHHHHHHHTTS--------------HHHHHHHHHHHCTTHHHHHH
T ss_pred hcccccccc----cchHHHHHHHhccHHHHHH-HHHHHHHhccccc-------------chHHHhhhhhhHHHHHHHHHH
Confidence 000 00000 1113344678888888876 3344445553320 000001111223345677777
Q ss_pred HHHHHHHHHHHHhhccccCcccccccccccCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhcchhHHHHHHHHHH
Q 005397 536 LRDHFCRQYVLSFIYSREGKTRLNGQIYLSGNEEYTQWDSDPLPSLPFQALFAKLQQLATVAGDVLLGKEKLQKILLARL 615 (698)
Q Consensus 536 lr~~fc~q~~~~~i~~~~~~~~l~~~~y~~~~~~~~~~~~~~~Ps~~Fq~lf~~l~~la~~~~d~~~g~e~~~~~ll~rl 615 (698)
+..+.|+ ++++.||.+ |.|. + .+...+.|..+ .+.+.+-..+..-.+=.... =+......|+.++
T Consensus 365 l~~~~~~-~L~~~if~D-----l~p~-~--~~Lft~~W~~~----~~~~~I~~Ti~dY~~d~~~~--l~~~~~~~l~~~~ 429 (566)
T PF06046_consen 365 LAKECCQ-YLLEEIFND-----LKPH-F--KKLFTKKWYSG----EAVDTICATIEDYLQDFQHY--LRPPYFQELIEEL 429 (566)
T ss_dssp HHHHHHH-HHHHHHHHC-----THHH-H--CTTTSGGGCTS-----HHHHHHHHHHHHHHHHCCC--S-HHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHH-----hHHH-H--HHhCcCcCcCc----chHHHHHHHHHHHHHHHHHh--ccccHHHHHHHHH
Confidence 7777555 556667652 1222 2 23334789854 55666665555433322222 2234566677777
Q ss_pred HHHHHH-HhcCcchhhHhhhcCC-----CCCCccchhhhhhHHHHHHHHH
Q 005397 616 TETVVM-WLSAEQEFWAVFEDES-----SPIQPLGLQQLILDMHFTVEIA 659 (698)
Q Consensus 616 ~etvv~-~ls~~~~fw~~~e~~~-----~~~~~~glqq~~Ldm~f~~~~a 659 (698)
.+.+|. ||.. +-.+. ..-.+.+..++.-|.+=+..+-
T Consensus 430 ~~~~v~~Yl~~-------l~~kk~~~~~~~~~~~~a~~i~~D~~~l~~~F 472 (566)
T PF06046_consen 430 HDRVVKEYLRA-------LMKKKIKFKNKEERKEAAERIRRDAEQLKSFF 472 (566)
T ss_dssp HHHHHHHHHHG-------GGG---------CCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HHHhhhhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 776665 4433 22221 2336789999999988777764
No 21
>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane. The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0015031 protein transport, 0000145 exocyst
Probab=81.12 E-value=14 Score=35.68 Aligned_cols=82 Identities=17% Similarity=0.238 Sum_probs=65.7
Q ss_pred CCCCCCCChhhhHHHhhccCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHH-------HHHHHHHHHHHHHHHHH
Q 005397 10 FPSIESITPQSKIDSVYQSHTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLR-------LSEEVVETEHELMELRK 81 (698)
Q Consensus 10 ~f~~~~Fdp~~Yv~~~~~~~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~-------tSKEIs~LE~Em~qL~~ 81 (698)
.+-.++|+|=..+=+++-. +.-|+.+...++.+++ .+...|+.-|-.||..|=. +..-|+.--..+.++|.
T Consensus 15 ~~~~~~~~pv~~al~~ld~-ss~g~~~~~~~f~~~~~~~~~~L~~vV~eh~q~Fn~sI~sy~~i~~~i~~sq~~i~~lK~ 93 (142)
T PF04048_consen 15 FMLTDDFNPVELALSLLDD-SSVGRAHRYQEFEELKKRIEKALQEVVNEHYQGFNSSIGSYSQILSSISESQERIRELKE 93 (142)
T ss_pred HHhcCCCcHHHHHHHhcCC-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567999998888777644 4457888999999999 9999999999999998854 56667777777788888
Q ss_pred HHHHHHHHHHH
Q 005397 82 HISAQGILVQD 92 (698)
Q Consensus 82 lLseQ~~lv~~ 92 (698)
-|.+-+..+.+
T Consensus 94 ~L~~ak~~L~~ 104 (142)
T PF04048_consen 94 SLQEAKSLLGC 104 (142)
T ss_pred HHHHHHHHHhc
Confidence 77777777655
No 22
>KOG4182 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.51 E-value=1.4e+02 Score=34.74 Aligned_cols=409 Identities=14% Similarity=0.129 Sum_probs=188.4
Q ss_pred cCCCCCCCCCChhhhHHHhhcc-CCH----------HHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 005397 7 DDDFPSIESITPQSKIDSVYQS-HTE----------KGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEH 74 (698)
Q Consensus 7 ~~~~f~~~~Fdp~~Yv~~~~~~-~~e----------k~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~ 74 (698)
|+.-|+.+.|||..||...|+. +.+ +-|+.+..+|+-.- .....+-.+--.--..-=|++||...|-.
T Consensus 2 Dlg~fSdekFda~~WiNancka~h~ed~rddsea~e~~i~dle~KLQia~eeigaalEEqSggal~rmPRaakd~~~Lq~ 81 (828)
T KOG4182|consen 2 DLGAFSDEKFDAAEWINANCKAFHEEDGRDDSEAAEAFIRDLEAKLQIAIEEIGAALEEQSGGALARMPRAAKDSAALQA 81 (828)
T ss_pred CCccccccccCHHHHHhhhhhhcccccCcccHHHHHHHHHHHHHHHHHHHHHHhHHHHHhccchHhhCchhhhHHHHHHH
Confidence 4567999999999999999987 222 34555555554333 22223333222233445689999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh--h-hhhhhhhhcCCCcccccCCCcccccCCCCCCChhhHHHHhhhhHHHHHhhccH
Q 005397 75 ELMELRKHISAQGILVQDLMTGV--C-RQLEELSVANGNIDESLSDPQKIELEDPLPNEIDKCKMIFLEKIDVLLAEHKV 151 (698)
Q Consensus 75 Em~qL~~lLseQ~~lv~~L~~~~--~-s~~~~w~~~~~~~~~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDVlIAeR~f 151 (698)
+...|+.-++.-..-+..-...+ | ..+.--++.....+.++.+.+ +...|- .+..+|+--.|-++.
T Consensus 82 Da~~Lq~kma~il~el~~aegesadCiAaLaRldn~kQkleaA~esLQ----------daaGl~-nL~a~lED~Fa~gDL 150 (828)
T KOG4182|consen 82 DAHRLQEKMAAILLELAAAEGESADCIAALARLDNKKQKLEAAKESLQ----------DAAGLG-NLLAELEDGFARGDL 150 (828)
T ss_pred HHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHhccHHHHHHHHHHHHH----------hhccHH-HHHHHHHHHhhcCCc
Confidence 99999887665333333322111 1 000000000000011111111 112233 344466666666666
Q ss_pred HHHHHHHHHHHhhccccccCCCCChHHHHhHHHHHHHHHHHHHHHH--HHHhcCCCCC------hH-HHHHHHHHHHhcC
Q 005397 152 EEAIEVLDAEERNFPELRSSGEASSAQASSFKSDFLKRKAMVEDQL--VKITEQPSIG------IL-ELKKALTDLIKLG 222 (698)
Q Consensus 152 eeAv~llek~~~~l~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L--~~~~~~~s~~------~~-~~rravs~L~RLG 222 (698)
-.|.+-+-..++-+..... +. -..+|+++|.+-= .+.+.+|++- +. ....-+..++|.|
T Consensus 151 ~~aadkLaalqkcL~A~~e--------la----efAe~qkQlE~~edRLEAlaqPrltda~a~~ktd~AQd~r~I~irIg 218 (828)
T KOG4182|consen 151 KGAADKLAALQKCLHAQEE--------LA----EFAERQKQLEDFEDRLEALAQPRLTDAFAEGKTDQAQDFRQIFIRIG 218 (828)
T ss_pred hhHHHHHHHHHHHHHHHHH--------hH----HHHHHHHHHHHHHHHHHHHcCchHHHHHHccChHHHHHHHHHHHHHh
Confidence 6655544444332211000 00 1223333332211 1334455431 11 3344467889999
Q ss_pred CcchHHHHHHHHHHHHHHHhhhhc-ccCCC-------------CCCccccc--------hhhHHHhhh----HHHHHHHH
Q 005397 223 KGPLAHQLLLKYYASRLQRSFEVY-LPSSS-------------VCPEVFPA--------TISKLVFST----VSLTTKDS 276 (698)
Q Consensus 223 ~~~~A~~lfL~~rs~~I~~~~R~l-r~eg~-------------~~g~~YI~--------~LS~v~Ft~----I~~ta~ef 276 (698)
+-.+--.-|=+.+-.-|+..-++. ...|. +.|..+-. +.=..|+.- ..+-.+|-
T Consensus 219 RfkqLelqY~~Vq~k~ikQlWedfd~kQ~anklanersesqrlssgdEfQstssq~qfaq~LT~fYDeLL~~~eqe~KWC 298 (828)
T KOG4182|consen 219 RFKQLELQYRAVQKKFIKQLWEDFDEKQGANKLANERSESQRLSSGDEFQSTSSQPQFAQFLTLFYDELLEHCEQEVKWC 298 (828)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhhcccccccccccccChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887766555555555554432221 00110 01111111 111223332 23456788
Q ss_pred HhhhCCCCCchhHHHH----------------------HHHHHHHHHHHHHHhhCCCCcchhhhHHHHHHHHHHHHHH-h
Q 005397 277 GLIFGDNPVYSNRVVQ----------------------WAEWEIEYFVRLVKENAPPSETISAMRAASISVEASVNYC-S 333 (698)
Q Consensus 277 ~~~F~~~~~~~S~~V~----------------------WA~~Ele~Fa~l~~Rqv~ss~~~~~l~~~aeCv~ia~~hc-~ 333 (698)
+.+||++ |+--.-+ =+.+|++..|.-.+-..+.. ...-+.|-..|- .
T Consensus 299 m~aF~dd--ym~l~~kliaE~lgaLgasf~a~i~la~gda~~e~eaLAk~a~dl~Sgd--------lpkgini~tkHLea 368 (828)
T KOG4182|consen 299 MNAFGDD--YMPLPFKLIAELLGALGASFDAHILLALGDANEELEALAKFAKDLHSGD--------LPKGINIFTKHLEA 368 (828)
T ss_pred HHhcCCc--cccccHHHHHHHHhhhchhHHHHHHHHhccccHHHHHHHHHHHHhccCc--------CccchhHHHHHHHH
Confidence 8999985 2211111 23344444443333222111 011123334455 3
Q ss_pred hHHhcCCC----------cHHHHHHhhhHhHHHHHHHHHHHHHHHHhhhh----hcCCccccCCCCCCCCccc--CC--C
Q 005397 334 LLESQGLK----------LSRLLLLLLRPYIEEVLELNFRRARKMVFNLE----DIDESLLLSPHFMSPLSLF--AT--S 395 (698)
Q Consensus 334 ~L~e~GLd----------l~flL~~lLrp~ve~aL~~~~~ri~e~i~~~~----~~D~W~~~~~~~~~~~s~~--~~--~ 395 (698)
+++...+. |+.-.+++|-..+ +|+-+++.+.+..-..+- +.+-=++..--...|..+. .. +
T Consensus 369 LiElh~iTgsfarniqhlfaEee~RiL~dtl-eAifepFekF~QkYgklE~aiLSseia~ldlrgavtrgvgang~elSd 447 (828)
T KOG4182|consen 369 LIELHHITGSFARNIQHLFAEEEHRILGDTL-EAIFEPFEKFIQKYGKLEEAILSSEIARLDLRGAVTRGVGANGAELSD 447 (828)
T ss_pred HHHHhhcchhhhhhHHHHhhHHHHHHHHHHH-HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcccccccccccCCCCccH
Confidence 34444444 4444444444333 344455555444322210 0000000000000111000 01 1
Q ss_pred CceecchhHHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHhC
Q 005397 396 SDSMLVDSGSRFMHIVEEILEQLTPLVVLHFGGNILTRISQLFDKYLDALNRAL 449 (698)
Q Consensus 396 ~~~~LT~S~~~F~~~vq~fled~~~L~~~~L~~~il~~l~~lF~~yv~~L~~al 449 (698)
.--+|-.|..+.+-.+..-+|.|....+---.--+.-.|..||..|+.++-.-+
T Consensus 448 ~VR~lEESipklv~lLeaA~ERC~gfTg~~~a~eLIlaLddI~~q~iem~~e~l 501 (828)
T KOG4182|consen 448 GVRHLEESIPKLVELLEAACERCAGFTGDLAACELILALDDIFKQQIEMFGEIL 501 (828)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhhcccCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 113666788888888888889988876644333445567889999999875443
No 23
>PF05664 DUF810: Protein of unknown function (DUF810); InterPro: IPR008528 This family consists of several plant proteins of unknown function.
Probab=78.29 E-value=20 Score=43.30 Aligned_cols=96 Identities=11% Similarity=0.107 Sum_probs=78.9
Q ss_pred HHHHHHhhhHhHHHHHHHHHHHHHHHHhhhhhcCCccccCCCCCCCCcccCCCCceecchhHHHHHHHHHHHHhhccccc
Q 005397 343 SRLLLLLLRPYIEEVLELNFRRARKMVFNLEDIDESLLLSPHFMSPLSLFATSSDSMLVDSGSRFMHIVEEILEQLTPLV 422 (698)
Q Consensus 343 ~flL~~lLrp~ve~aL~~~~~ri~e~i~~~~~~D~W~~~~~~~~~~~s~~~~~~~~~LT~S~~~F~~~vq~fled~~~L~ 422 (698)
-|-++.++.+-|.+=+++..+++.+-+.+....|+|.|... .-.=+.|++-..+++.+-++....|-
T Consensus 510 Py~vE~~i~~lv~~Wi~~~~~~l~ewv~ra~~qE~W~P~S~-------------~e~hs~SvVEvfri~~eTvd~ff~L~ 576 (677)
T PF05664_consen 510 PYEVESLISNLVKRWIQEQLERLNEWVDRAIKQEKWNPRSK-------------EERHSPSVVEVFRIFNETVDQFFQLP 576 (677)
T ss_pred ceeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcCCC-------------CCCCcchHHHHHHHHHHHHHHHHcCC
Confidence 36688899999999999999999999999999999998853 12345789999999999999988774
Q ss_pred cc---chhhhHHHHHHHHHHHHHHHHHHhCCC
Q 005397 423 VL---HFGGNILTRISQLFDKYLDALNRALPG 451 (698)
Q Consensus 423 ~~---~L~~~il~~l~~lF~~yv~~L~~al~~ 451 (698)
.+ .+...+.+||...|..|++++...+..
T Consensus 577 ~~~~~~~l~~L~~gld~~lq~Y~~~v~~~~gs 608 (677)
T PF05664_consen 577 WPMHADFLQALSKGLDKALQRYCEKVEQSCGS 608 (677)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33 366788899999999999998766543
No 24
>PF04305 DUF455: Protein of unknown function (DUF455); InterPro: IPR007402 This is a family of uncharacterised proteins.
Probab=69.48 E-value=29 Score=36.93 Aligned_cols=122 Identities=11% Similarity=0.094 Sum_probs=85.5
Q ss_pred cccchhhHHHhhhHHHHHHHHHhhh-CC-CCCchhHHHHHHHHHHHHHHHHHHhhC-C-----CCcchhhhHHHHHHHHH
Q 005397 256 VFPATISKLVFSTVSLTTKDSGLIF-GD-NPVYSNRVVQWAEWEIEYFVRLVKENA-P-----PSETISAMRAASISVEA 327 (698)
Q Consensus 256 ~YI~~LS~v~Ft~I~~ta~ef~~~F-~~-~~~~~S~~V~WA~~Ele~Fa~l~~Rqv-~-----ss~~~~~l~~~aeCv~i 327 (698)
.-+..++.+=|++|.-+.+- ..-| ++ +..|+..+++.|.+|...|.-+..|-- . .-.+..+| |.-|.+.
T Consensus 69 ~llHaiAhIE~~AIdLa~Da-~~RF~~~lP~~f~~D~~~va~dEarHf~ll~~rL~~lG~~yGd~P~h~gL--w~~~~~t 145 (253)
T PF04305_consen 69 ALLHAIAHIELNAIDLALDA-IYRFHPNLPREFYDDWLRVADDEARHFRLLRERLEELGSDYGDLPAHDGL--WEAAEQT 145 (253)
T ss_pred HHHHHhcchHHHHHHHHHHH-HHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchhhHH--HHHHHHh
Confidence 45667888889998776554 4557 55 557889999999999999998888743 2 12333455 6666554
Q ss_pred H--------HHHHhhHHhcCCCcHHHHHHhhhHhHHHHHHHHHHHH-HHHHhhhhhcCCcccc
Q 005397 328 S--------VNYCSLLESQGLKLSRLLLLLLRPYIEEVLELNFRRA-RKMVFNLEDIDESLLL 381 (698)
Q Consensus 328 a--------~~hc~~L~e~GLdl~flL~~lLrp~ve~aL~~~~~ri-~e~i~~~~~~D~W~~~ 381 (698)
+ +-| -.||..|||.++-+...|+..=......-.+.| .|.|.+-..-.+|-..
T Consensus 146 ~~dl~~R~A~vp-~~~EArGLD~~p~~~~k~~~~gD~~sa~iL~~I~~DEi~HV~~G~rWf~~ 207 (253)
T PF04305_consen 146 AHDLLARMALVP-RVLEARGLDVTPFIIEKFRSAGDEESAAILEIILRDEIGHVAIGNRWFRY 207 (253)
T ss_pred ccCHHHHHHHHH-HHHHhhCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 3 222 368999999999998888744333333334444 8889999888999766
No 25
>PF03081 Exo70: Exo70 exocyst complex subunit; InterPro: IPR004140 The Exo70 protein forms one subunit of the exocyst complex. First discovered in Saccharomyces cerevisiae [], Exo70 and other exocyst proteins have been observed in several other eukaryotes, including humans. In S. cerevisiae, the exocyst complex is involved in the late stages of exocytosis, and is localized at the tip of the bud, the major site of exocytosis in yeast []. Exo70 interacts with the Rho3 GTPase []. This interaction mediates one of the three known functions of Rho3 in cell polarity: vesicle docking and fusion with the plasma membrane (the other two functions are regulation of actin polarity and transport of exocytic vesicles from the mother cell to the bud) []. In humans, the functions of Exo70 and the exocyst complex are less well characterised: Exo70 is expressed in several tissues and is thought to also be involved in exocytosis [].; GO: 0006887 exocytosis, 0000145 exocyst; PDB: 2PFV_A 2B7M_B 2B1E_A 2PFT_A.
Probab=66.29 E-value=1.8e+02 Score=31.80 Aligned_cols=32 Identities=9% Similarity=0.058 Sum_probs=23.6
Q ss_pred CCceecchhHHHHHHHHHHHHhhcccccccch
Q 005397 395 SSDSMLVDSGSRFMHIVEEILEQLTPLVVLHF 426 (698)
Q Consensus 395 ~~~~~LT~S~~~F~~~vq~fled~~~L~~~~L 426 (698)
+.-..+|.+++.|.+.+.++-+-+..+...+-
T Consensus 138 g~Vh~lT~~vm~yl~~L~~y~~~l~~il~~~~ 169 (371)
T PF03081_consen 138 GGVHPLTSYVMNYLKRLAEYRDTLESILQSDG 169 (371)
T ss_dssp S---HHHHHHHHHHHHHHCTHHHHHHCCCTT-
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34568999999999999999888777766543
No 26
>PF01031 Dynamin_M: Dynamin central region; InterPro: IPR000375 Dynamin is a microtubule-associated force-producing protein of 100 Kd which is involved in the production of microtubule bundles. At the N terminus of dynamin is a GTPase domain (see IPR001401 from INTERPRO), and at the C terminus is a PH domain (see IPR001849 from INTERPRO). Between these two domains lies a central region of unknown function, which this entry represents.; GO: 0005525 GTP binding; PDB: 3ZVR_A 2AKA_B 2X2F_D 2X2E_D 3SNH_A 3ZYS_D 3ZYC_D 1JWY_B 1JX2_B 3SZR_A ....
Probab=64.64 E-value=84 Score=33.62 Aligned_cols=168 Identities=15% Similarity=0.079 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhcCCcch----HHHHHHHHHHHHHHHhhhhcccCCCCCCccccchhhHHHhhhHHHHHHHHHhhhCC-CC
Q 005397 210 ELKKALTDLIKLGKGPL----AHQLLLKYYASRLQRSFEVYLPSSSVCPEVFPATISKLVFSTVSLTTKDSGLIFGD-NP 284 (698)
Q Consensus 210 ~~rravs~L~RLG~~~~----A~~lfL~~rs~~I~~~~R~lr~eg~~~g~~YI~~LS~v~Ft~I~~ta~ef~~~F~~-~~ 284 (698)
.+.++-.-|.+||.... ....||-.........+++.. +|... .++..-..-.++-|...-.++...+.+ -+
T Consensus 88 ~l~~~~~eL~~lG~~~~~~~~~~~~~l~~~~~~f~~~~~~~i-~G~~~--~~~~~~~l~~~ari~~~f~~~~~~~~~~~~ 164 (295)
T PF01031_consen 88 KLQEAEKELKRLGPPRPETPEEQRAYLLQIISKFSRIFKDAI-DGEYS--DEFSTNELRGGARIRYIFNEWFDKFLEKID 164 (295)
T ss_dssp HHHHHHHHHHTHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHH-TT---------TTS--HHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHh-cCCcc--ccccccccchhhHHHHHHHhhhhhhhhhhc
Confidence 56666688888987655 666666665555555555532 23211 112222222233333322222111111 11
Q ss_pred CchhHHHHHHHHHHH--------------HHHHHHHhhCCCCcchhhhHHHHHHHHHHHHHHhhHHhcCCCcHHHHHHhh
Q 005397 285 VYSNRVVQWAEWEIE--------------YFVRLVKENAPPSETISAMRAASISVEASVNYCSLLESQGLKLSRLLLLLL 350 (698)
Q Consensus 285 ~~~S~~V~WA~~Ele--------------~Fa~l~~Rqv~ss~~~~~l~~~aeCv~ia~~hc~~L~e~GLdl~flL~~lL 350 (698)
+.-.....+.+..++ .|-.++++|+..-.. .++..+.++.+.+...+..+....+.=-+-|...+
T Consensus 165 ~~~~~~~~eI~~~i~~~~G~elp~f~p~~afe~Li~~~i~~l~~-Pa~~cv~~V~~~l~~i~~~~~~~~~~~fp~L~~~i 243 (295)
T PF01031_consen 165 PFEDLSDEEIRTAIRNSRGRELPGFVPESAFESLIRKQIEKLEE-PALQCVEEVHEELQRIVEQVLEKEFERFPNLKEAI 243 (295)
T ss_dssp HHHHHHHHHHHHHHHH--S-SSS-SCCHHHHHHHHHHHHHTTHH-HHHHHHHHHHHHHHHHHHHHHCHHHTTSHHHHHHH
T ss_pred cccchhHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHhhcchhcCCchHHHHHH
Confidence 222344555555554 477788888822210 12333333333334444443333333224577778
Q ss_pred hHhHHHHHHHHHHHHHHHHhhhhhcCC-cccc
Q 005397 351 RPYIEEVLELNFRRARKMVFNLEDIDE-SLLL 381 (698)
Q Consensus 351 rp~ve~aL~~~~~ri~e~i~~~~~~D~-W~~~ 381 (698)
+..+.+.++.......+.|...+.-|. +.-+
T Consensus 244 ~~~v~~~l~~~~~~a~~~i~~li~~E~~~i~T 275 (295)
T PF01031_consen 244 KEAVQQLLEECREPAKEMIENLIDMELSYINT 275 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTS--T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 888888888888888888888887776 5433
No 27
>PRK15380 pathogenicity island 1 protein SopD2; Provisional
Probab=59.20 E-value=7.3 Score=41.16 Aligned_cols=60 Identities=27% Similarity=0.446 Sum_probs=37.8
Q ss_pred HHHHHHHHHH---HHHHHHhhcc-ccCcccccccccccCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHhh-hhhc
Q 005397 532 SFDKLRDHFC---RQYVLSFIYS-REGKTRLNGQIYLSGNEEYTQWDSDPLPSLPFQALFAKLQQLATVAG-DVLL 602 (698)
Q Consensus 532 ~~~~lr~~fc---~q~~~~~i~~-~~~~~~l~~~~y~~~~~~~~~~~~~~~Ps~~Fq~lf~~l~~la~~~~-d~~~ 602 (698)
.-||+||+|| .++||+.+|+ -+|-.| +++.+.+-..++|-+. .-|.+|+++|.-+. |.|+
T Consensus 36 ~WDR~KD~FrsekK~eALEvLy~lIhg~~R--------~~~~Em~Vdv~gm~KI---yAF~qL~qlA~Pa~QD~F~ 100 (319)
T PRK15380 36 VWDRFKDCFRTHKKQEVLEVLYTLIHGCER--------ENQAELNVDITGMEKI---HAFTQLKQYANPSQQDRFV 100 (319)
T ss_pred hHHHHHHHHhcccHHHHHHHHHHHHccccc--------CCccccccccccHHHH---HHHHHHHHhcCccccceEE
Confidence 5699999999 7899999986 233111 1222222223455333 68999999988765 5554
No 28
>PF07393 Sec10: Exocyst complex component Sec10; InterPro: IPR009976 This family contains the Sec10 component (approximately 650 residues long) of the eukaryotic exocyst complex, which specifically affects the synthesis and delivery of secretory and basolateral plasma membrane proteins [].; GO: 0006887 exocytosis, 0048278 vesicle docking, 0005737 cytoplasm
Probab=53.85 E-value=4.8e+02 Score=31.65 Aligned_cols=181 Identities=13% Similarity=0.145 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHhhccccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCC--hHHHHHHHHHHHhcCCcchHHH
Q 005397 152 EEAIEVLDAEERNFPELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKITEQPSIG--ILELKKALTDLIKLGKGPLAHQ 229 (698)
Q Consensus 152 eeAv~llek~~~~l~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~~~~~s~~--~~~~rravs~L~RLG~~~~A~~ 229 (698)
.+|..++.+...+...+... ......+.+|..-...+...|.++....... ...+|+.+..|..++.|..+.+
T Consensus 75 ~~~A~il~~L~~ls~~~~~~-----~~~~~~~~~I~~~~e~fE~~LL~eFe~ay~~~d~~~M~~~A~vL~~fngg~~~i~ 149 (710)
T PF07393_consen 75 EEAAKILRNLLRLSKELSDI-----PGFEEARENIEKYCEIFENALLREFEIAYREGDYERMKEFAKVLLEFNGGSSCID 149 (710)
T ss_pred HHHHHHHHHHHHHHHhcCCc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 67777777777777665211 1245566778888888988888775553333 3499999999999999999999
Q ss_pred HHHHHHHHHH-HHhhhh---cc--------cCCCCCCccccchhhHHHhhhHHHHHHH----HHhhhCCCCCchhHHHHH
Q 005397 230 LLLKYYASRL-QRSFEV---YL--------PSSSVCPEVFPATISKLVFSTVSLTTKD----SGLIFGDNPVYSNRVVQW 293 (698)
Q Consensus 230 lfL~~rs~~I-~~~~R~---lr--------~eg~~~g~~YI~~LS~v~Ft~I~~ta~e----f~~~F~~~~~~~S~~V~W 293 (698)
.|+..|.--+ +..+.. +. ......+..+...+ .-+|.-|..++++ -..+|+++.+.+.-||+=
T Consensus 150 ~fi~k~~~f~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~l-~~~~~~i~~~i~~e~~iI~~VFp~~~~Vm~~fier 228 (710)
T PF07393_consen 150 FFINKHEFFIDEDQLDESNGFEDEEIWEKLSDPDSHPPINEESL-DAFFEDIRDVINEESKIIDRVFPNPEPVMQKFIER 228 (710)
T ss_pred HHHHhChhhhhhhhhccccccchhHHHHhccCcccccccchHHH-HHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHH
Confidence 9999887666 112210 00 00111122233333 3466666666554 348898876667777664
Q ss_pred HHHH-HHHHHHHHHhhCCCCcchhhhHHHHHHHHHHHHHHhhHHhc
Q 005397 294 AEWE-IEYFVRLVKENAPPSETISAMRAASISVEASVNYCSLLESQ 338 (698)
Q Consensus 294 A~~E-le~Fa~l~~Rqv~ss~~~~~l~~~aeCv~ia~~hc~~L~e~ 338 (698)
.-++ |..|...+-..........=|++...+...+..-++.|.+.
T Consensus 229 vf~~~I~~~i~~lL~~a~~~s~~~YLr~l~~~y~~t~~lv~~L~~~ 274 (710)
T PF07393_consen 229 VFEQVIQEYIESLLEEASSISTLAYLRTLHGLYSQTKKLVDDLKEF 274 (710)
T ss_pred HHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4333 44444444333321111123566666666676777888877
No 29
>PF08631 SPO22: Meiosis protein SPO22/ZIP4 like; InterPro: IPR013940 SPO22 is a meiosis-specific protein with similarity to phospholipase A2, involved in completion of nuclear divisions during meiosis; induced early in meiosis []. It is also involved in sporulation [].
Probab=48.38 E-value=2.5e+02 Score=29.72 Aligned_cols=179 Identities=12% Similarity=0.017 Sum_probs=96.6
Q ss_pred HHhhccHHHHHHHHHHHHhhccccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHH---hcCCC-CChH---HHHHHHHH
Q 005397 145 LLAEHKVEEAIEVLDAEERNFPELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKI---TEQPS-IGIL---ELKKALTD 217 (698)
Q Consensus 145 lIAeR~feeAv~llek~~~~l~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~---~~~~s-~~~~---~~rravs~ 217 (698)
...|++++-|...+.|++..+... .|. ....|++++-.. +-... .... =++++...
T Consensus 3 A~~~~~~~~A~~~~~K~~~~~~~~------~~~-----------~~~~La~~~yn~G~~l~~~~~~~~~a~~wL~~a~~~ 65 (278)
T PF08631_consen 3 AWKQGDLDLAEHMYSKAKDLLNSL------DPD-----------MAEELARVCYNIGKSLLSKKDKYEEAVKWLQRAYDI 65 (278)
T ss_pred chhhCCHHHHHHHHHHhhhHHhcC------CcH-----------HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 457899999999999998766421 111 122455554322 11111 1111 36777777
Q ss_pred HHhcCCcchHHHHHHHHHHHHHHHhhhhcccCCCCCCccccchhhHHHhhhHHHHHHHHHhhhCCCCCch-hHHHHHHH-
Q 005397 218 LIKLGKGPLAHQLLLKYYASRLQRSFEVYLPSSSVCPEVFPATISKLVFSTVSLTTKDSGLIFGDNPVYS-NRVVQWAE- 295 (698)
Q Consensus 218 L~RLG~~~~A~~lfL~~rs~~I~~~~R~lr~eg~~~g~~YI~~LS~v~Ft~I~~ta~ef~~~F~~~~~~~-S~~V~WA~- 295 (698)
|-..++.++...-+.+-|-..++.-++...-.+. .. .+.-..++.+.-..-||+.|..+ =.+-.|.+
T Consensus 66 l~~~~~~~~~~~~~~elr~~iL~~La~~~l~~~~---~~--------~~~ka~~~l~~l~~e~~~~~~~~~L~l~il~~~ 134 (278)
T PF08631_consen 66 LEKPGKMDKLSPDGSELRLSILRLLANAYLEWDT---YE--------SVEKALNALRLLESEYGNKPEVFLLKLEILLKS 134 (278)
T ss_pred HHhhhhccccCCcHHHHHHHHHHHHHHHHHcCCC---hH--------HHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhcc
Confidence 7665666666665655566666655554321111 11 22223344444456678765444 44445554
Q ss_pred HHHHHHHHHHHhhCCCCc-chhhhHHHHHHHHHHHHHHhhHHhcCCCcHHHHHHhhhHh
Q 005397 296 WEIEYFVRLVKENAPPSE-TISAMRAASISVEASVNYCSLLESQGLKLSRLLLLLLRPY 353 (698)
Q Consensus 296 ~Ele~Fa~l~~Rqv~ss~-~~~~l~~~aeCv~ia~~hc~~L~e~GLdl~flL~~lLrp~ 353 (698)
.-.+.+...+.|=|.+.. ...++..+..|+.-...|+..+ .+-.+-.+|...+.|+
T Consensus 135 ~~~~~~~~~L~~mi~~~~~~e~~~~~~l~~i~~l~~~~~~~--a~~~ld~~l~~r~~~~ 191 (278)
T PF08631_consen 135 FDEEEYEEILMRMIRSVDHSESNFDSILHHIKQLAEKSPEL--AAFCLDYLLLNRFKSS 191 (278)
T ss_pred CChhHHHHHHHHHHHhcccccchHHHHHHHHHHHHhhCcHH--HHHHHHHHHHHHhCCC
Confidence 223445555555552221 3357888889988888888754 3333444555555555
No 30
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]
Probab=45.67 E-value=6.6e+02 Score=30.85 Aligned_cols=415 Identities=12% Similarity=0.114 Sum_probs=196.4
Q ss_pred CCCCCCCCChhhhHHHhhcc-CCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 9 DFPSIESITPQSKIDSVYQS-HTEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQ 86 (698)
Q Consensus 9 ~~f~~~~Fdp~~Yv~~~~~~-~~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ 86 (698)
+.|.+++|+.=.|+..++-. .+=.+|..+.++++..= ....+|+.+|-.+==.=-+.=+-..+.+.-|.+|.+.+.+-
T Consensus 12 q~~~t~~f~~v~~in~lfp~eqSL~~id~li~ki~~eir~~d~~l~~~Vr~q~N~g~~~~e~l~da~~ai~eL~~~i~ei 91 (793)
T KOG2180|consen 12 QMIPTPEFNFVEYINELFPAEQSLTNIDSLIQKIQGEIRRVDKNLLAVVRTQENSGTRGKENLADAQAAIEELFQKIQEI 91 (793)
T ss_pred HhcCCcchhHHHHHHHhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 56777899999999998866 44445555555444333 34444444444332222233333455677777777777775
Q ss_pred HHHHHHHhhhhhhhhhhhhhcCCCcccccCCCcccccCCCCCC-ChhhHHHHhhhhHHHHHhhccHHHHHHHHHHHHhhc
Q 005397 87 GILVQDLMTGVCRQLEELSVANGNIDESLSDPQKIELEDPLPN-EIDKCKMIFLEKIDVLLAEHKVEEAIEVLDAEERNF 165 (698)
Q Consensus 87 ~~lv~~L~~~~~s~~~~w~~~~~~~~~~~~~~e~~~~d~~~~~-~~~~Wl~e~~deLDVlIAeR~feeAv~llek~~~~l 165 (698)
+..-.+=..++ +..+. ..+..+-+|...- -+.++ .+..=+.+--|-|-+++..|.|-+|+..++..-..+
T Consensus 92 ks~ae~Te~~V-~eiTr---dIKqLD~AKkNLT-----tSiT~L~~L~MLv~~vesL~~l~~kr~y~e~a~~lqai~~ll 162 (793)
T KOG2180|consen 92 KSVAESTEAMV-QEITR---DIKQLDFAKKNLT-----TSITTLHRLHMLVTGVESLNALLSKRSYGEAASPLQAILQLL 162 (793)
T ss_pred HHHHHhHHHHH-HHHHH---HHHhhhHHHhhHH-----HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHhHHHHHHHHH
Confidence 55444433222 11110 0000010000000 00000 234556677778999999999999999888876665
Q ss_pred cccccCCCCChHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCChH---------HHHHHHHHHHhcCCcchHHHHHHHHHH
Q 005397 166 PELRSSGEASSAQASSFKSDFLKRKAMVEDQLVKITEQPSIGIL---------ELKKALTDLIKLGKGPLAHQLLLKYYA 236 (698)
Q Consensus 166 ~~~~~~~~~~~~~~~~lk~~i~eR~~~La~~L~~~~~~~s~~~~---------~~rravs~L~RLG~~~~A~~lfL~~rs 236 (698)
..-..-. +-..+..+..+|++-++.|..++.+.....-.+++ .+..++..+--|.-.. ++=+++.+=
T Consensus 163 ~~F~~Yk--~v~~I~~Ls~si~~~k~~l~~qi~~df~~~F~~~~~~~~~~~l~~l~daC~v~d~lepsv--reelIkwf~ 238 (793)
T KOG2180|consen 163 NHFIAYK--SVDEIANLSESIDKLKKSLLSQIFQDFKAAFSGGETHEEALLLQKLSDACLVVDALEPSV--REELIKWFC 238 (793)
T ss_pred HHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHHHHHHhCCcc--HHHHHHHHH
Confidence 4332211 12347788888999999999988755332111110 2222222222222111 122222211
Q ss_pred HHHHHhhhhcccCCCCCCccccchhhHHHhhhHHHHHHHHHhhhCCC-CC--c--hhHHHHHHHHHHHHHHHHHHhhCCC
Q 005397 237 SRLQRSFEVYLPSSSVCPEVFPATISKLVFSTVSLTTKDSGLIFGDN-PV--Y--SNRVVQWAEWEIEYFVRLVKENAPP 311 (698)
Q Consensus 237 ~~I~~~~R~lr~eg~~~g~~YI~~LS~v~Ft~I~~ta~ef~~~F~~~-~~--~--~S~~V~WA~~Ele~Fa~l~~Rqv~s 311 (698)
...-....+|=. +..+ ....-++.+-| .-++.-.++|...|+.- |+ + .--+++.|..==+....+++|----
T Consensus 239 ~qqL~ey~~IF~-en~E-~a~LDkidrRY-~wfKr~L~~fe~k~~~iFP~dW~v~~RLt~eFc~~Tr~~L~~Il~~~~~~ 315 (793)
T KOG2180|consen 239 SQQLEEYEQIFR-ENEE-AASLDKLDRRY-AWFKRLLRDFEEKWKPIFPADWHVAYRLTIEFCHQTRKQLESILKRRKKE 315 (793)
T ss_pred HHHHHHHHHHHh-ccHh-hhhhhhHHHHH-HHHHHHHHHHHHhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 111111111100 1000 11222222221 12222233344333320 00 0 1234444444444444444443211
Q ss_pred CcchhhhHHHHHHHHHHHHHHhhHHh-c-C------------------CCcHHHHHHhhhHhHHHHHHHHHHHHHHHHhh
Q 005397 312 SETISAMRAASISVEASVNYCSLLES-Q-G------------------LKLSRLLLLLLRPYIEEVLELNFRRARKMVFN 371 (698)
Q Consensus 312 s~~~~~l~~~aeCv~ia~~hc~~L~e-~-G------------------Ldl~flL~~lLrp~ve~aL~~~~~ri~e~i~~ 371 (698)
..+....-+++.++..=+.|.- . | ..|...+.+.+-|++.=-++.--+.+.+-+-.
T Consensus 316 ----~~v~lll~Alq~TleFE~~L~kRF~g~~~~~~~~~ns~~~~k~~~~f~~~isScFEPhLtlyI~~qek~l~ellek 391 (793)
T KOG2180|consen 316 ----PDVKLLLFALQSTLEFEKFLDKRFSGGTLTGKPEKNSQFEPKERFNFEGAISSCFEPHLTLYIESQEKELSELLEK 391 (793)
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccccccchhhHHHHhcccchhhhhhHHHHHHHHHHHH
Confidence 1133344455555554444442 2 1 25566777788888777777777777788888
Q ss_pred hhhcCCccccCCCCCCCCcccCCCCceecchhHHHHHHHHHHHHhhccccccc-c-hhhhHHHHHHHHHHHHHH-HHHHh
Q 005397 372 LEDIDESLLLSPHFMSPLSLFATSSDSMLVDSGSRFMHIVEEILEQLTPLVVL-H-FGGNILTRISQLFDKYLD-ALNRA 448 (698)
Q Consensus 372 ~~~~D~W~~~~~~~~~~~s~~~~~~~~~LT~S~~~F~~~vq~fled~~~L~~~-~-L~~~il~~l~~lF~~yv~-~L~~a 448 (698)
.+.+.+|..- |.. .++..-..|.+|+.-|. .+...+-++..|..- + +.+... ...+..+.|-. .|...
T Consensus 392 ~v~e~~~~~~-p~~------~~~~~s~vlpSsadlF~-~Ykkcltq~~~Ls~n~dpl~~~~~-~f~k~LreYa~kil~~~ 462 (793)
T KOG2180|consen 392 FVSEEKWDGE-PKS------NTDEESLVLPSSADLFV-AYKKCLTQCSELSENNDPLIALLA-VFSKWLREYAQKILLGN 462 (793)
T ss_pred HHhhhccCCC-CCC------CcccccccCccHHHHHH-HHHHHHHHHHHhccCCchHHHHHH-HHHHHHHHHHHHHhhcc
Confidence 8889999741 211 12223345666666553 334445555555433 1 221111 33334445544 44555
Q ss_pred CCCC
Q 005397 449 LPGP 452 (698)
Q Consensus 449 l~~~ 452 (698)
||..
T Consensus 463 lP~~ 466 (793)
T KOG2180|consen 463 LPDT 466 (793)
T ss_pred CCcc
Confidence 6764
No 31
>PF03915 AIP3: Actin interacting protein 3; InterPro: IPR022782 This entry represents a domain found in yeast actin interacting protein 3 and bud site selection protein 6. In these proteins it is typically found towards the C terminus. It is also found in metazoan proteins, such as the mouse enhancer trap locus 4 protein. ; PDB: 3ONX_B 3OKQ_A.
Probab=45.16 E-value=1.6e+02 Score=33.88 Aligned_cols=59 Identities=17% Similarity=0.295 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 31 EKGIRKLCCELLDLKDAVENLCGNMHTK-----YLAFLRLSEEVVETEHELMELRKHISAQGIL 89 (698)
Q Consensus 31 ek~lr~~~~~L~~lk~t~e~LkknVy~N-----Y~~FI~tSKEIs~LE~Em~qL~~lLseQ~~l 89 (698)
..+-+.+-+++-+|++++++||+.|... =.+.-..+|||+.+..++-+|+..+..-+-.
T Consensus 212 ~~~sd~Ll~kVdDLQD~VE~LRkDV~~RgvRp~~~qle~v~kdi~~a~~~L~~m~~~i~~~kp~ 275 (424)
T PF03915_consen 212 SEESDRLLTKVDDLQDLVEDLRKDVVQRGVRPSPKQLETVAKDISRASKELKKMKEYIKTEKPI 275 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 4566777888999999999999999874 4577778999999999998888887763333
No 32
>smart00806 AIP3 Actin interacting protein 3. Aip3p/Bud6p is a regulator of cell and cytoskeletal polarity in Saccharomyces cerevisiae that was previously identified as an actin-interacting protein. Actin-interacting protein 3 (Aip3p) localizes at the cell cortex where cytoskeleton assembly must be achieved to execute polarized cell growth, and deletion of AIP3 causes gross defects in cell and cytoskeletal polarity. Aip3p localization is mediated by the secretory pathway, mutations in early- or late-acting components of the secretory apparatus lead to Aip3p mislocalization PUBMED:10679021.
Probab=44.01 E-value=1.4e+02 Score=34.24 Aligned_cols=66 Identities=17% Similarity=0.246 Sum_probs=50.8
Q ss_pred hhhHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 19 QSKIDSVYQSHTEKGIRKLCCELLDLKDAVENLCGNMHTK-----YLAFLRLSEEVVETEHELMELRKHISA 85 (698)
Q Consensus 19 ~~Yv~~~~~~~~ek~lr~~~~~L~~lk~t~e~LkknVy~N-----Y~~FI~tSKEIs~LE~Em~qL~~lLse 85 (698)
..|+..-- ..=+.+-..+-.+.-+|++.+|+|||.|..- =.|+=.+.|||+..+.|+-.|...+..
T Consensus 205 R~y~e~~k-~kL~~~Sd~lltkVDDLQD~vE~LRkDV~~RgVRp~~~qLe~v~kdi~~a~keL~~m~~~i~~ 275 (426)
T smart00806 205 RAYVESSK-KKLSEDSDSLLTKVDDLQDIIEALRKDVAQRGVRPSKKQLETVQKELETARKELKKMEEYIDI 275 (426)
T ss_pred hHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45665331 1123566677788899999999999999875 357778999999999999999888766
No 33
>PF04420 CHD5: CHD5-like protein; InterPro: IPR007514 Members of this family are probably coiled-coil proteins that are similar to the CHD5 (Congenital heart disease 5) protein. The exact molecular function of these eukaryotic proteins is unknown.; PDB: 3SJA_H 3SJC_D 3SJB_D 3ZS8_D 3VLC_E.
Probab=36.61 E-value=95 Score=30.65 Aligned_cols=65 Identities=23% Similarity=0.339 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 005397 30 TEKGIRKLCCELLDLK-DAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGILVQDLMTGV 97 (698)
Q Consensus 30 ~ek~lr~~~~~L~~lk-~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~~~~ 97 (698)
..++.++++.|+.+++ +-..- +...+|+.....=+.+.++|.|+-++++.++.++.........+
T Consensus 38 ~~~~~~~l~~Ei~~l~~E~~~i---S~qDeFAkwaKl~Rk~~kl~~el~~~~~~~~~~~~~~~~~~~~~ 103 (161)
T PF04420_consen 38 SSKEQRQLRKEILQLKRELNAI---SAQDEFAKWAKLNRKLDKLEEELEKLNKSLSSEKSSFDKSLSKV 103 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS----TTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHcC---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777777777777 32221 66679999999999999999999999999999999888876544
No 34
>PF04129 Vps52: Vps52 / Sac2 family ; InterPro: IPR007258 Vps52 complexes with Vps53 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=35.10 E-value=7.9e+02 Score=28.72 Aligned_cols=74 Identities=11% Similarity=0.104 Sum_probs=59.8
Q ss_pred hhhhHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 005397 18 PQSKIDSVYQSHTEKGIRKLCCELLDLKDAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGILVQDLMTGV 97 (698)
Q Consensus 18 p~~Yv~~~~~~~~ek~lr~~~~~L~~lk~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~~~~ 97 (698)
.++|++. .+++.++..++.+....-+.|..-...-...-=.+|.||..|...=.+|+..|...+.+...|..-+
T Consensus 6 i~dy~~e------~~~~~~Lh~~i~~cd~~L~~le~~L~~Fq~~L~~iS~eI~~LQ~~S~~l~~~L~Nrk~~~~~L~~~i 79 (508)
T PF04129_consen 6 IQDYLKE------SENFADLHNQIQECDSILESLEEMLSNFQNDLGSISSEIRSLQERSSSLNVKLKNRKAVEEKLSPFI 79 (508)
T ss_pred HHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3566653 3577888888877777777777777777777778999999999999999999999999999987644
No 35
>COG2882 FliJ Flagellar biosynthesis chaperone [Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones]
Probab=34.70 E-value=1.6e+02 Score=29.06 Aligned_cols=56 Identities=14% Similarity=0.194 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 32 KGIRKLCCELLDLK-DAVENLCGNMH----TKYLAFLRLSEEVVETEHELMELRKHISAQGILVQDL 93 (698)
Q Consensus 32 k~lr~~~~~L~~lk-~t~e~LkknVy----~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L 93 (698)
+.|+.+-.+=.++- .-++.++.-|- .||.+||. .||..+.+.++.++.++..|+..
T Consensus 37 ~qL~~l~~y~~ey~q~~~~k~~~G~s~~q~~nyq~fI~------~Le~~I~q~~~~~~~~~~~ve~~ 97 (148)
T COG2882 37 EQLKMLSGYRNEYEQNLNEKLKSGVSAAQWQNYQQFIS------QLEVAIDQQQSQLSKLRKQVEQK 97 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444 44445554443 49999975 48888888888888877666654
No 36
>PF14733 ACDC: AP2-coincident C-terminal
Probab=33.61 E-value=1.2e+02 Score=27.03 Aligned_cols=37 Identities=8% Similarity=0.140 Sum_probs=31.1
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 49 ENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISA 85 (698)
Q Consensus 49 e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLse 85 (698)
-...+.+-.+|..|++.|+.+..|+-=+.=+++.+..
T Consensus 36 ~~~~~~~i~~H~~~V~~a~~~~~L~pyl~lF~~cI~~ 72 (91)
T PF14733_consen 36 RKIYKRVIDYHIRYVNSAKNIEELQPYLALFSNCIKN 72 (91)
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHc
Confidence 3457788999999999999999999888888887743
No 37
>PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=33.11 E-value=1.2e+02 Score=28.51 Aligned_cols=23 Identities=17% Similarity=0.150 Sum_probs=19.0
Q ss_pred HHHHhhccHHHHHHHHHHHHhhc
Q 005397 143 DVLLAEHKVEEAIEVLDAEERNF 165 (698)
Q Consensus 143 DVlIAeR~feeAv~llek~~~~l 165 (698)
++++.+++|++|.+.++++-...
T Consensus 56 ~~~~~~g~~~~A~~~l~~~~~~~ 78 (145)
T PF09976_consen 56 KAAYEQGDYDEAKAALEKALANA 78 (145)
T ss_pred HHHHHCCCHHHHHHHHHHHHhhC
Confidence 67778999999999999986543
No 38
>COG2959 HemX Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]
Probab=30.74 E-value=8.4e+02 Score=27.70 Aligned_cols=113 Identities=14% Similarity=0.180 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCcc
Q 005397 33 GIRKLCCELLDLKDAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGILVQDLMTGVCRQLEELSVANGNID 112 (698)
Q Consensus 33 ~lr~~~~~L~~lk~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~~~~~s~~~~w~~~~~~~~ 112 (698)
+++.+..++..+. .+.+.++-.-.|-..|-....|+..+|.++-..-+.|+++..-|.++..
T Consensus 64 ~l~a~~~q~~~~~-~aqe~q~l~~ql~~~~~~~q~el~~l~~~~~~~~~ql~e~Q~~v~~is~----------------- 125 (391)
T COG2959 64 ELQALQQQLKALQ-LAQENQKLLAQLESLIAQQQAELDRLERQLETLQKQLSELQKKVATISG----------------- 125 (391)
T ss_pred HHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcc-----------------
Confidence 3444444444222 3345555556677778888999999999999999999887766666530
Q ss_pred cccCCCcccccCCCCCCChhhHHHHhhhhHHH--------HHhhccHHHHHHHHHHHHhhccccccCCCCChHHHHhHHH
Q 005397 113 ESLSDPQKIELEDPLPNEIDKCKMIFLEKIDV--------LLAEHKVEEAIEVLDAEERNFPELRSSGEASSAQASSFKS 184 (698)
Q Consensus 113 ~~~~~~e~~~~d~~~~~~~~~Wl~e~~deLDV--------lIAeR~feeAv~llek~~~~l~~~~~~~~~~~~~~~~lk~ 184 (698)
+ ++.+|+.. |-|- +...++++.|+.+++-+...+..+... .+..++.
T Consensus 126 ---~-------------~~~dWlla---Ead~Ll~lA~rkL~l~~DV~TAv~lLk~aD~~La~~NdP------~l~~~R~ 180 (391)
T COG2959 126 ---S-------------DRKDWLLA---EADFLLKLAGRKLVLDQDVTTAVALLKSADARLAAMNDP------SLIAVRR 180 (391)
T ss_pred ---C-------------ChhhHHHH---HHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHhccCc------hHHHHHH
Confidence 1 23478743 3333 334789999999999999999876432 2555554
Q ss_pred HHHH
Q 005397 185 DFLK 188 (698)
Q Consensus 185 ~i~e 188 (698)
+|..
T Consensus 181 Aia~ 184 (391)
T COG2959 181 AIAN 184 (391)
T ss_pred HHHH
Confidence 4443
No 39
>PF11047 SopD: Salmonella outer protein D; InterPro: IPR022747 The proteins in this entry are also known as secreted effector proteins. Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. They contribute to the formation of Salmonella-induced filaments (Sifs) in infected epithelial cells and to replication in macrophages []. SopD is a type III virulence effector protein whose structure consists of 38% alpha-helix and 26% beta-strand [].; GO: 0009405 pathogenesis, 0033644 host cell membrane
Probab=30.08 E-value=46 Score=35.95 Aligned_cols=21 Identities=33% Similarity=0.629 Sum_probs=18.2
Q ss_pred HHHHHHHHHHH---HHHHHHhhcc
Q 005397 531 HSFDKLRDHFC---RQYVLSFIYS 551 (698)
Q Consensus 531 ~~~~~lr~~fc---~q~~~~~i~~ 551 (698)
..-||+||+|| .++||+-+|+
T Consensus 35 GlWDKfKD~FRseKK~EALe~LY~ 58 (319)
T PF11047_consen 35 GLWDKFKDWFRSEKKQEALEVLYD 58 (319)
T ss_pred hhHHHHHHHHhcccHHHHHHHHHH
Confidence 44699999999 8899999986
No 40
>smart00762 Cog4 COG4 transport protein. This region is found in yeast oligomeric golgi complex component 4 which is involved in ER to Golgi and intra Golgi transport.
Probab=29.84 E-value=2.4e+02 Score=31.00 Aligned_cols=69 Identities=16% Similarity=0.214 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHhhhhcccCCCCC------CccccchhhHHHhhhHHHHHHHHH
Q 005397 208 ILELKKALTDLIKLGKGPLAHQLLLKYYASRLQRSFEVYLPSSSVC------PEVFPATISKLVFSTVSLTTKDSG 277 (698)
Q Consensus 208 ~~~~rravs~L~RLG~~~~A~~lfL~~rs~~I~~~~R~lr~eg~~~------g~~YI~~LS~v~Ft~I~~ta~ef~ 277 (698)
..++-|-..+.--||.++.+.+.|-+.-...|....|.+.-+.... +..|...|..+ |..|+.+.+...
T Consensus 25 ~~~i~rffkLFpllg~~eeGL~~Y~~yic~~Ia~~ar~~~~~~~~~~~~~~~~~~~a~~lt~L-fe~ia~ii~~h~ 99 (324)
T smart00762 25 VPELTRFFKLFPLIGMEEEGLELYSKYICDIIADKARSLLNELAGASDDTRAAVFYADTLTHL-FENVATIIEQHQ 99 (324)
T ss_pred HHHHHHHHHhccccCChHhhHHHHHHHHHHHHHHHHHHHhhccccccccccccchHHHHHHHH-HHHHHHHHHhcc
Confidence 4478889999999999999999999998887877777664332221 34577777666 677777766544
No 41
>PF12523 DUF3725: Protein of unknown function (DUF3725); InterPro: IPR022199 This domain family is found in viruses, and is approximately 70 amino acids in length. The family is found in association with PF01577 from PFAM. There is a conserved FLE sequence motif.
Probab=28.80 E-value=74 Score=27.35 Aligned_cols=54 Identities=19% Similarity=0.105 Sum_probs=42.4
Q ss_pred cchhhhhhHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccccC
Q 005397 643 LGLQQLILDMHFTVEIARFAGYPSRHVHQIASAIIARAIRTFSTRGIDPRYYSYYC 698 (698)
Q Consensus 643 ~glqq~~Ldm~f~~~~a~~g~y~s~~~~~~~~~~i~~a~~~~~~~g~dp~~~~~~~ 698 (698)
.|..-.+|=.+|-.|+++-===.+|-++..|-+|+.|++ ...-|-||++.-++|
T Consensus 9 ~GAki~qLv~i~naE~gR~FLEg~~~~Ra~ifeivrktm--vg~LgYdfe~Elw~C 62 (74)
T PF12523_consen 9 EGAKILQLVQIGNAEVGRTFLEGNRFRRADIFEIVRKTM--VGRLGYDFESELWEC 62 (74)
T ss_pred CchhhhhHHHhccHHHHHHHHhcchHHHHHHHHHHHHHH--HHHhcCCCccceEEe
Confidence 456667788899999996322235888999999998875 577899999999888
No 42
>KOG1488 consensus Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) [Translation, ribosomal structure and biogenesis]
Probab=28.64 E-value=7.2e+02 Score=29.31 Aligned_cols=133 Identities=14% Similarity=0.147 Sum_probs=71.1
Q ss_pred HHHHHHHhhcccccccchhhhHHHHHHHHHH-HHHHHHHHhC-C-CCCCCccccccccCcccc-cCChHHHhHHHHHHHH
Q 005397 409 HIVEEILEQLTPLVVLHFGGNILTRISQLFD-KYLDALNRAL-P-GPSDDDNLTELKETIPFR-AETDSEQLSLLGVAFT 484 (698)
Q Consensus 409 ~~vq~fled~~~L~~~~L~~~il~~l~~lF~-~yv~~L~~al-~-~~~~~~~~~e~~~~~~~~-a~t~~qq~ail~Na~~ 484 (698)
+.||..+|-|..=-...+...|...+.+|.. .|-++++--+ . |..+++. ++++ -...--.++..+=|+=
T Consensus 339 RVIQr~lE~c~~~~~~~i~~ei~~~~~~L~~dQygNYVIQHVie~g~~~~~~-------~I~~~l~~~ll~~Sq~KfASn 411 (503)
T KOG1488|consen 339 RVIQRILEHCSEDQKQPLMEEIIRNCDQLAQDQYGNYVIQHVIEHGSPYRDT-------IIIKCLLGNLLSMSQHKFASN 411 (503)
T ss_pred HHHHHHhhcCChHhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhcCChhhhh-------hHHHHHHhhHHHHHHHHHHHH
Confidence 5677777777776666666666666666554 4444333222 1 2212221 2222 1112222334444444
Q ss_pred HHh--------hhhhhhhhhhcCCCCCCccccc-----CCCCC------CCCcchhhHH-HHHHHHHHHHHHHHHHHHHH
Q 005397 485 IMD--------ELLPNTVSKVWNPKNESKEVGN-----ENIAP------NASTTTELKD-WKRHLQHSFDKLRDHFCRQY 544 (698)
Q Consensus 485 l~d--------~Llp~~~~k~~~~~~~~~~~~~-----~~~~~------~~~~~~e~~e-~~~~lq~~~~~lr~~fc~q~ 544 (698)
++| .+.-+.+.++++...+.. ..+ +.++. -+...|++++ .+.++..+..+||-+=--+|
T Consensus 412 VVEk~~~~a~~~~r~~i~~Ei~~~~~~~~-~~L~~mmkdQYgNYVVQkmi~~~~~~q~~~i~~rI~~h~~~Lrk~syGKh 490 (503)
T KOG1488|consen 412 VVEKAFLFAPPLLRALIMNEIFPGYVEHP-DALDIMMKDQYGNYVVQKMIDICGPEQRELIKSRVKPHASRLRKFSYGKH 490 (503)
T ss_pred HHHHHHhhCCHHHHHHHHHHhcCCccCCc-cHHHHHHHHhhhhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHccCccHHH
Confidence 444 344566677887765532 111 11222 1123566665 78889999999998666777
Q ss_pred HHHhh
Q 005397 545 VLSFI 549 (698)
Q Consensus 545 ~~~~i 549 (698)
|+..+
T Consensus 491 Iia~l 495 (503)
T KOG1488|consen 491 IIAKL 495 (503)
T ss_pred HHHHH
Confidence 77765
No 43
>KOG2344 consensus Exocyst component protein and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.80 E-value=1.2e+03 Score=28.36 Aligned_cols=44 Identities=16% Similarity=0.068 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHhhhhcccCC
Q 005397 207 GILELKKALTDLIKLGKGPLAHQLLLKYYASRLQRSFEVYLPSS 250 (698)
Q Consensus 207 ~~~~~rravs~L~RLG~~~~A~~lfL~~rs~~I~~~~R~lr~eg 250 (698)
..+.++.-+..+++-|.+.+.+..|...|...+...+..|..+.
T Consensus 191 v~~dLk~Ia~~mi~~gy~~eC~~~Y~~vrk~i~~e~l~~L~~e~ 234 (623)
T KOG2344|consen 191 VMTDLKAIAQRMIAAGYEKECFKVYKSIRKSILDESLVNLGVEK 234 (623)
T ss_pred hHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhcCeee
Confidence 44588888899999999999999999999999999999776654
No 44
>KOG2163 consensus Centromere/kinetochore protein zw10 involved in mitotic chromosome segregation [Cell cycle control, cell division, chromosome partitioning]
Probab=27.50 E-value=1.2e+03 Score=28.36 Aligned_cols=76 Identities=9% Similarity=0.160 Sum_probs=52.3
Q ss_pred CceecchhHHHHHHHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHHHHHhCCCCCCCccccccccCcccccCChHHH
Q 005397 396 SDSMLVDSGSRFMHIVEEILEQLTPLVVLHFGGNILTRISQLFDKYLDALNRALPGPSDDDNLTELKETIPFRAETDSEQ 475 (698)
Q Consensus 396 ~~~~LT~S~~~F~~~vq~fled~~~L~~~~L~~~il~~l~~lF~~yv~~L~~al~~~~~~~~~~e~~~~~~~~a~t~~qq 475 (698)
+-|..|.|+..|+.++.+.+++++-=-.-+-...+--.+..+|.-|+..+ |... +.. -++-|||
T Consensus 432 prC~vSeSa~~fvnL~~~tL~~at~ss~dq~a~~la~~arni~hly~~vV----P~kh-----------rel-l~siPq~ 495 (719)
T KOG2163|consen 432 PRCTVSESAINFVNLLRDTLKAATASSDDQAAAKLALTARNIVHLYVIVV----PRKH-----------REL-LSSIPQM 495 (719)
T ss_pred cceeecHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh----hHHH-----------HHH-HHhcchH
Confidence 35899999999999999999998755434444455555666777777552 3211 000 2567888
Q ss_pred hHHH-HHHHHHHh
Q 005397 476 LSLL-GVAFTIMD 487 (698)
Q Consensus 476 ~ail-~Na~~l~d 487 (698)
-+|. .|+-|+..
T Consensus 496 AaifhNNCmyi~h 508 (719)
T KOG2163|consen 496 AAIFHNNCMYISH 508 (719)
T ss_pred HHHHhcccHHHHH
Confidence 8865 67999876
No 45
>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []. Glycogen synthase kinase-3beta (GSK-3beta) is required for the binding of BICD to dynein but not to dynactin, acting to maintain the anchoring of microtubules to the centromere []. It appears that amino-acid residues 437-617 of BicD and the kinase activity of GSK-3 are necessary for the formation of a complex between BicD and GSK-3beta in intact cells [].; GO: 0006810 transport, 0005794 Golgi apparatus
Probab=24.67 E-value=1.2e+03 Score=28.91 Aligned_cols=74 Identities=18% Similarity=0.301 Sum_probs=57.7
Q ss_pred CCCCCChhhh-HHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 12 SIESITPQSK-IDSVYQSHTEKGIRKLCCELLDLKDAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISA 85 (698)
Q Consensus 12 ~~~~Fdp~~Y-v~~~~~~~~ek~lr~~~~~L~~lk~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLse 85 (698)
..+.|.|.-- |.+++.-.+-.+|+++.+.|.....=...|..++-..=+++=.+-.+.++....+..|..+|..
T Consensus 244 ~~~~~~p~~~lv~DLfSEl~~~EiqKL~qQL~qve~EK~~L~~~L~e~Q~qLe~a~~als~q~eki~~L~e~l~a 318 (717)
T PF09730_consen 244 KSESFSPAPSLVSDLFSELNLSEIQKLKQQLLQVEREKSSLLSNLQESQKQLEHAQGALSEQQEKINRLTEQLDA 318 (717)
T ss_pred CCCCCCCCCcccchhhhhcchHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577878665 7788877889999999999999885556788888887778877777777777777777666554
No 46
>PF12998 ING: Inhibitor of growth proteins N-terminal histone-binding; InterPro: IPR024610 Histones undergo numerous post-translational modifications, including acetylation and methylation, at residues which are then probable docking sites for various chromatin remodelling complexes. Inhibitor of growth proteins (INGs) specifically bind to residues that have been thus modified. INGs carry a well-characterised C-terminal PHD-type zinc-finger domain, binding with lysine 4-tri-methylated histone H3 (H3K4me3), as well as this N-terminal domain that binds unmodified H3 tails. Although these two regions can bind histones independently, together they increase the apparent association of the ING for the H3 tail. This entry represents the N-terminal histone binding domain found in inhibitor proteins.; PDB: 4AFL_A.
Probab=24.19 E-value=5e+02 Score=22.89 Aligned_cols=77 Identities=12% Similarity=0.134 Sum_probs=52.1
Q ss_pred hHHHhhccCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHH
Q 005397 21 KIDSVYQSHT--EKGIRKLCCELLDLKDAVENLCGNMHTKYLAFLRLSEE-----------VVETEHELMELRKHISAQG 87 (698)
Q Consensus 21 Yv~~~~~~~~--ek~lr~~~~~L~~lk~t~e~LkknVy~NY~~FI~tSKE-----------Is~LE~Em~qL~~lLseQ~ 87 (698)
|+.+.+...+ +.++++.-+.|.++-....++.+.+-+.+..|+....- +..++..+..+..+..+=-
T Consensus 2 ~le~f~d~~~~LP~el~r~l~~irelD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~l~deKv 81 (105)
T PF12998_consen 2 YLEDFLDSLENLPAELQRNLTLIRELDAKSQDLLEELDQQIQKFIKNHGSPSLSPEKRRELLKEIQEEYERALELSDEKV 81 (105)
T ss_dssp HHHHHHTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTS--S-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHChHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555533 78999999999999955888888899999999976642 4445555555555555544
Q ss_pred HHHHHHhhhh
Q 005397 88 ILVQDLMTGV 97 (698)
Q Consensus 88 ~lv~~L~~~~ 97 (698)
.+...+.+.+
T Consensus 82 ~lA~~~~d~v 91 (105)
T PF12998_consen 82 ALAQQAYDLV 91 (105)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 47
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=23.12 E-value=6.5e+02 Score=23.86 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=44.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005397 29 HTEKGIRKLCCELLDLKDAVENLCGNMHTKYLAFLRLSEEVVETEHELMELRKHISAQGIL 89 (698)
Q Consensus 29 ~~ek~lr~~~~~L~~lk~t~e~LkknVy~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~l 89 (698)
.+-++.++++++|.+.+.-.+.-|+.|-.+ |.+|++=...|-.+--+|-+||++...-
T Consensus 22 ~~~~~q~~l~~eL~~~k~el~~yk~~V~~H---F~~ta~Ll~~l~~~Y~~l~~Hla~~a~~ 79 (128)
T PF06295_consen 22 SNQQKQAKLEQELEQAKQELEQYKQEVNDH---FAQTAELLDNLTQDYQKLYQHLAKGAEE 79 (128)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344667788889988888888889999876 7788887777887777777777775543
No 48
>KOG3745 consensus Exocyst subunit - Sec10p [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.53 E-value=1.5e+03 Score=27.99 Aligned_cols=85 Identities=9% Similarity=-0.041 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHhhHHhcCCCcHHHHHHhhhHhHHHHHHHHHHHHHHHHhhhhhcCCccccCCCCCCCCcccCCCCce
Q 005397 319 RAASISVEASVNYCSLLESQGLKLSRLLLLLLRPYIEEVLELNFRRARKMVFNLEDIDESLLLSPHFMSPLSLFATSSDS 398 (698)
Q Consensus 319 ~~~aeCv~ia~~hc~~L~e~GLdl~flL~~lLrp~ve~aL~~~~~ri~e~i~~~~~~D~W~~~~~~~~~~~s~~~~~~~~ 398 (698)
+...+|+.++.++|+....++=+=.-.+......-..+-|..+..-+.|.++.-......... --
T Consensus 271 di~~D~~~l~~~~sk~ik~vf~~pe~V~q~~iq~If~~~ik~~~~e~le~~~~~~~~l~ylR~---------------L~ 335 (763)
T KOG3745|consen 271 DIFNDILKLCESESKFIKRVFPNPETVLQKFIQNIFGQKIKDRVEELLEECKEGKDFLAYLRD---------------LY 335 (763)
T ss_pred HHHHHHHHHHHhHhHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHH---------------HH
Confidence 347888888888888888877665554444444444555555555555554332222222211 01
Q ss_pred ecchhHHHHHHHHHHHHhhc
Q 005397 399 MLVDSGSRFMHIVEEILEQL 418 (698)
Q Consensus 399 ~LT~S~~~F~~~vq~fled~ 418 (698)
.|=++++++++-.+++++..
T Consensus 336 ~Lys~~~k~~~~L~~~~e~~ 355 (763)
T KOG3745|consen 336 GLYSSTLKLSKDLVDYFEQL 355 (763)
T ss_pred HHHHHHHhhhHHHHHHHHhh
Confidence 23344666666666766665
No 49
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=21.82 E-value=3.2e+02 Score=33.38 Aligned_cols=19 Identities=21% Similarity=0.050 Sum_probs=11.9
Q ss_pred HHHHhcCCcchHHHHHHHH
Q 005397 216 TDLIKLGKGPLAHQLLLKY 234 (698)
Q Consensus 216 s~L~RLG~~~~A~~lfL~~ 234 (698)
..|..+|+.+.|...|-++
T Consensus 196 ~~l~~~G~~~~A~~~~~~a 214 (694)
T PRK15179 196 QSLTRRGALWRARDVLQAG 214 (694)
T ss_pred HHHHHcCCHHHHHHHHHHH
Confidence 4556666666666666554
No 50
>PF08647 BRE1: BRE1 E3 ubiquitin ligase; InterPro: IPR013956 BRE1 is an E3 ubiquitin ligase that has been shown to act as a transcriptional activator through direct activator interactions [].
Probab=20.97 E-value=5.6e+02 Score=23.06 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 005397 64 RLSEEVVETEHELMELRKHISAQGILVQDLMT 95 (698)
Q Consensus 64 ~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~~ 95 (698)
.+-|-.-.|..||-.|+.+++-+.-++..|.+
T Consensus 49 a~mr~~d~l~~e~k~L~~~~~Ks~~~i~~L~~ 80 (96)
T PF08647_consen 49 AAMRSKDALDNEMKKLNTQLSKSSELIEQLKE 80 (96)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 34445556668888999999999998888887
No 51
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=20.15 E-value=5.1e+02 Score=31.20 Aligned_cols=66 Identities=20% Similarity=0.261 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 005397 32 KGIRKLCCELLDLKDAVENLCGNM---HTKYLAFLRLSEEVVETEHELMELRKHISAQGILVQDLMTGV 97 (698)
Q Consensus 32 k~lr~~~~~L~~lk~t~e~LkknV---y~NY~~FI~tSKEIs~LE~Em~qL~~lLseQ~~lv~~L~~~~ 97 (698)
.+++.+..++.++|+.++.|+..+ -++.-.=++..+||..++.++..|+.-|.+++.-+.-|.--.
T Consensus 436 ~e~~~L~~~~ee~k~eie~L~~~l~~~~r~~~~~~~~~rei~~~~~~I~~L~~~L~e~~~~ve~L~~~l 504 (652)
T COG2433 436 EENSELKRELEELKREIEKLESELERFRREVRDKVRKDREIRARDRRIERLEKELEEKKKRVEELERKL 504 (652)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555554554444322 223335578999999999999999999999999999987644
Done!