Query 005402
Match_columns 698
No_of_seqs 199 out of 1368
Neff 5.5
Searched_HMMs 46136
Date Thu Mar 28 22:53:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005402.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005402hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2099 Glycogen phosphorylase 100.0 9E-200 2E-204 1602.0 45.5 672 1-698 88-835 (843)
2 PRK14985 maltodextrin phosphor 100.0 3E-196 7E-201 1665.8 55.4 669 1-693 66-797 (798)
3 TIGR02093 P_ylase glycogen/sta 100.0 1E-195 3E-200 1663.0 57.9 672 1-692 57-794 (794)
4 PRK14986 glycogen phosphorylas 100.0 8E-194 2E-198 1651.8 59.1 675 1-697 77-815 (815)
5 cd04300 GT1_Glycogen_Phosphory 100.0 2E-193 4E-198 1651.0 58.4 673 1-692 60-797 (797)
6 PF00343 Phosphorylase: Carboh 100.0 7E-189 2E-193 1593.4 40.3 649 25-694 1-713 (713)
7 COG0058 GlgP Glucan phosphoryl 100.0 4E-157 8E-162 1335.0 39.6 625 1-694 69-750 (750)
8 cd04299 GT1_Glycogen_Phosphory 100.0 2E-119 3E-124 1046.8 37.1 533 31-690 91-688 (778)
9 TIGR02094 more_P_ylases alpha- 100.0 5E-115 1E-119 992.3 37.3 535 31-691 4-600 (601)
10 COG0297 GlgA Glycogen synthase 100.0 8E-31 1.7E-35 293.0 15.2 200 401-689 274-475 (487)
11 cd03791 GT1_Glycogen_synthase_ 100.0 3.8E-28 8.3E-33 269.5 24.8 456 38-689 6-474 (476)
12 PRK14098 glycogen synthase; Pr 100.0 9.5E-28 2.1E-32 270.3 27.9 329 242-689 141-483 (489)
13 TIGR02095 glgA glycogen/starch 100.0 1.4E-27 3E-32 266.3 27.3 449 38-689 7-470 (473)
14 PLN02939 transferase, transfer 99.9 6.8E-26 1.5E-30 266.2 29.4 204 400-689 757-964 (977)
15 PRK00654 glgA glycogen synthas 99.9 2.6E-25 5.6E-30 248.4 25.2 198 400-689 262-460 (466)
16 PLN02316 synthase/transferase 99.9 4.7E-25 1E-29 262.7 26.8 211 400-691 820-1033(1036)
17 PRK14099 glycogen synthase; Pr 99.9 4.6E-25 9.9E-30 248.4 19.8 205 400-692 274-479 (485)
18 TIGR02470 sucr_synth sucrose s 99.5 7.6E-13 1.6E-17 155.8 17.1 197 408-689 537-745 (784)
19 PLN00142 sucrose synthase 99.3 1.4E-11 3.1E-16 145.4 17.0 196 409-689 561-768 (815)
20 cd03792 GT1_Trehalose_phosphor 99.1 1.3E-09 2.8E-14 117.6 17.6 190 408-691 179-371 (372)
21 TIGR02149 glgA_Coryne glycogen 99.1 1.5E-09 3.3E-14 116.5 17.6 192 408-688 190-383 (388)
22 TIGR03449 mycothiol_MshA UDP-N 99.1 1.7E-09 3.7E-14 117.6 17.0 193 409-692 209-402 (405)
23 PHA01633 putative glycosyl tra 99.0 2E-09 4.4E-14 116.8 13.1 195 408-686 136-334 (335)
24 cd03821 GT1_Bme6_like This fam 99.0 6E-09 1.3E-13 107.7 14.8 127 410-564 194-320 (375)
25 TIGR02472 sucr_P_syn_N sucrose 99.0 5E-09 1.1E-13 116.7 14.9 186 418-689 245-438 (439)
26 TIGR02468 sucrsPsyn_pln sucros 98.9 9.6E-09 2.1E-13 124.2 15.9 189 418-693 476-672 (1050)
27 cd03805 GT1_ALG2_like This fam 98.9 1.3E-08 2.8E-13 109.5 15.3 131 418-564 208-338 (392)
28 PRK15484 lipopolysaccharide 1, 98.9 3.3E-08 7.2E-13 108.1 17.8 192 409-691 183-377 (380)
29 cd03800 GT1_Sucrose_synthase T 98.9 1.3E-08 2.9E-13 108.6 14.4 180 418-687 217-398 (398)
30 cd03813 GT1_like_3 This family 98.9 1.5E-08 3.3E-13 114.1 14.2 181 418-687 290-472 (475)
31 cd03796 GT1_PIG-A_like This fa 98.9 1.9E-08 4E-13 110.1 14.2 120 418-565 190-309 (398)
32 cd03793 GT1_Glycogen_synthase_ 98.9 4.6E-08 1E-12 112.0 17.8 152 400-558 274-507 (590)
33 cd03818 GT1_ExpC_like This fam 98.9 1.6E-08 3.5E-13 110.3 12.7 183 417-687 207-396 (396)
34 cd03788 GT1_TPS Trehalose-6-Ph 98.9 3.1E-07 6.6E-12 103.7 22.7 123 419-551 262-386 (460)
35 cd03822 GT1_ecORF704_like This 98.8 4.3E-08 9.2E-13 102.3 14.7 180 418-689 182-365 (366)
36 cd03809 GT1_mtfB_like This fam 98.8 2.6E-08 5.7E-13 103.8 12.7 174 418-687 192-365 (365)
37 TIGR03088 stp2 sugar transfera 98.8 2.9E-08 6.2E-13 106.7 13.1 181 418-691 191-372 (374)
38 PRK15427 colanic acid biosynth 98.8 6.1E-08 1.3E-12 107.3 15.4 179 420-691 221-405 (406)
39 cd04962 GT1_like_5 This family 98.8 6.7E-08 1.4E-12 102.7 14.6 179 410-689 188-368 (371)
40 cd03808 GT1_cap1E_like This fa 98.8 5.1E-08 1.1E-12 99.9 13.3 173 418-686 185-358 (359)
41 cd03807 GT1_WbnK_like This fam 98.8 1.3E-07 2.9E-12 97.4 15.3 125 409-564 183-307 (365)
42 PRK15490 Vi polysaccharide bio 98.7 1.2E-07 2.5E-12 108.7 14.9 127 418-576 395-521 (578)
43 cd03795 GT1_like_4 This family 98.7 8.4E-08 1.8E-12 100.6 12.3 116 419-564 189-304 (357)
44 PF00534 Glycos_transf_1: Glyc 98.7 2.1E-07 4.6E-12 89.0 12.7 131 408-567 4-134 (172)
45 TIGR02400 trehalose_OtsA alpha 98.7 8.3E-06 1.8E-10 92.2 27.3 130 407-551 250-381 (456)
46 cd03820 GT1_amsD_like This fam 98.7 1.4E-07 3E-12 96.3 11.3 172 418-686 175-347 (348)
47 cd03799 GT1_amsK_like This is 98.7 2.1E-07 4.6E-12 97.5 12.8 171 419-684 177-354 (355)
48 cd05844 GT1_like_7 Glycosyltra 98.6 2.2E-07 4.8E-12 98.5 12.7 176 419-687 186-366 (367)
49 cd04949 GT1_gtfA_like This fam 98.6 1.2E-07 2.7E-12 101.6 10.5 168 420-685 203-372 (372)
50 cd03819 GT1_WavL_like This fam 98.6 2.4E-07 5.2E-12 97.5 12.4 128 409-564 175-303 (355)
51 TIGR02918 accessory Sec system 98.6 4.2E-07 9.1E-12 103.8 15.2 178 421-689 319-497 (500)
52 PLN02871 UDP-sulfoquinovose:DA 98.6 1.6E-07 3.4E-12 105.4 11.3 172 418-690 260-432 (465)
53 cd03825 GT1_wcfI_like This fam 98.6 4.9E-07 1.1E-11 95.1 14.3 179 409-691 181-364 (365)
54 PLN02949 transferase, transfer 98.6 4.9E-07 1.1E-11 102.3 14.9 121 419-558 266-387 (463)
55 cd03801 GT1_YqgM_like This fam 98.6 7.8E-07 1.7E-11 90.8 14.7 176 418-688 196-372 (374)
56 PRK15179 Vi polysaccharide bio 98.6 9.7E-07 2.1E-11 104.3 16.6 127 418-576 514-640 (694)
57 cd03814 GT1_like_2 This family 98.6 6.9E-07 1.5E-11 92.9 13.8 168 419-689 195-363 (364)
58 cd03817 GT1_UGDG_like This fam 98.6 6.3E-07 1.4E-11 92.9 13.0 129 418-576 199-327 (374)
59 cd03794 GT1_wbuB_like This fam 98.5 5.9E-07 1.3E-11 93.1 12.4 171 418-686 217-394 (394)
60 cd03798 GT1_wlbH_like This fam 98.5 1.3E-06 2.8E-11 89.8 13.6 118 418-563 199-316 (377)
61 cd04955 GT1_like_6 This family 98.5 1E-06 2.3E-11 92.7 12.8 113 422-564 194-307 (363)
62 cd03823 GT1_ExpE7_like This fa 98.5 1.5E-06 3.3E-11 90.0 13.6 169 418-689 188-357 (359)
63 PRK10307 putative glycosyl tra 98.5 2.8E-06 6E-11 93.3 15.6 184 408-691 218-407 (412)
64 PHA01630 putative group 1 glyc 98.5 1.4E-06 3.1E-11 94.3 13.0 186 421-689 142-328 (331)
65 cd01635 Glycosyltransferase_GT 98.5 6E-07 1.3E-11 87.1 8.7 120 426-575 109-229 (229)
66 cd04951 GT1_WbdM_like This fam 98.4 3.8E-06 8.2E-11 88.2 14.4 124 409-564 178-301 (360)
67 cd03802 GT1_AviGT4_like This f 98.4 3.5E-06 7.6E-11 87.9 13.5 124 420-576 170-293 (335)
68 cd03811 GT1_WabH_like This fam 98.3 6.9E-06 1.5E-10 83.8 13.4 127 417-575 185-311 (353)
69 cd03806 GT1_ALG11_like This fa 98.3 6.2E-06 1.3E-10 91.8 13.9 129 419-564 235-364 (419)
70 cd04946 GT1_AmsK_like This fam 98.3 1.1E-05 2.3E-10 89.4 14.4 175 419-686 228-406 (407)
71 cd03812 GT1_CapH_like This fam 98.3 3.5E-06 7.6E-11 88.8 10.0 120 417-566 188-307 (358)
72 cd03804 GT1_wbaZ_like This fam 98.2 3.9E-06 8.5E-11 89.4 9.4 107 421-566 195-301 (351)
73 PRK14501 putative bifunctional 98.2 0.00026 5.6E-09 84.6 25.1 130 420-559 264-400 (726)
74 PLN03063 alpha,alpha-trehalose 98.2 0.00041 9E-09 83.7 25.9 129 408-551 271-401 (797)
75 TIGR03087 stp1 sugar transfera 98.0 6.9E-05 1.5E-09 82.1 14.2 171 418-688 221-393 (397)
76 PLN02846 digalactosyldiacylgly 98.0 6E-05 1.3E-09 85.4 12.4 120 421-575 228-347 (462)
77 cd03816 GT1_ALG1_like This fam 97.9 0.00016 3.4E-09 80.4 15.2 135 419-576 230-366 (415)
78 KOG1111 N-acetylglucosaminyltr 97.8 0.00017 3.6E-09 78.4 12.0 117 419-563 193-309 (426)
79 PRK10125 putative glycosyl tra 97.7 0.00029 6.2E-09 78.5 12.5 113 419-576 239-354 (405)
80 PRK09922 UDP-D-galactose:(gluc 97.7 0.00028 6.1E-09 76.3 11.8 114 420-564 179-297 (359)
81 PLN02501 digalactosyldiacylgly 97.6 0.00035 7.5E-09 82.2 12.1 116 411-560 538-653 (794)
82 TIGR02398 gluc_glyc_Psyn gluco 97.6 0.014 3E-07 67.0 23.6 141 404-559 273-420 (487)
83 COG0438 RfaG Glycosyltransfera 97.5 0.0041 9E-08 62.2 15.7 117 422-566 200-317 (381)
84 PLN02275 transferase, transfer 97.2 0.0027 5.9E-08 69.4 11.5 137 422-576 214-358 (371)
85 PLN03064 alpha,alpha-trehalose 96.7 0.43 9.4E-06 58.9 26.1 138 406-558 353-497 (934)
86 KOG0853 Glycosyltransferase [C 96.7 0.0098 2.1E-07 67.9 11.1 190 419-690 271-466 (495)
87 PF13692 Glyco_trans_1_4: Glyc 96.4 0.014 3.1E-07 53.5 8.4 103 420-558 1-104 (135)
88 cd04950 GT1_like_1 Glycosyltra 95.8 0.072 1.6E-06 58.3 11.6 104 419-556 203-309 (373)
89 PRK05749 3-deoxy-D-manno-octul 95.5 0.2 4.4E-06 55.5 13.6 122 408-555 224-350 (425)
90 TIGR03713 acc_sec_asp1 accesso 95.2 0.22 4.8E-06 57.8 13.1 177 420-686 320-516 (519)
91 PF08323 Glyco_transf_5: Starc 94.9 0.063 1.4E-06 56.0 7.0 37 39-75 7-43 (245)
92 PRK13609 diacylglycerol glucos 94.9 0.56 1.2E-05 51.1 14.6 107 409-556 192-300 (380)
93 PRK00726 murG undecaprenyldiph 94.6 0.39 8.5E-06 51.7 12.5 173 418-689 180-355 (357)
94 PLN02605 monogalactosyldiacylg 93.5 2.1 4.6E-05 47.1 15.6 114 408-556 195-309 (382)
95 PRK13608 diacylglycerol glucos 92.3 1.8 3.9E-05 48.0 13.0 179 408-691 191-371 (391)
96 TIGR00236 wecB UDP-N-acetylglu 91.9 2.8 6.1E-05 45.5 13.8 119 409-564 189-309 (365)
97 PF00982 Glyco_transf_20: Glyc 91.4 4.6 9.9E-05 46.6 15.3 143 405-563 264-415 (474)
98 PRK00025 lpxB lipid-A-disaccha 91.3 4.7 0.0001 43.7 14.7 110 408-556 175-287 (380)
99 TIGR01133 murG undecaprenyldip 90.6 3 6.5E-05 44.3 12.2 105 412-557 172-278 (348)
100 PRK10117 trehalose-6-phosphate 90.1 42 0.00092 38.9 24.4 141 406-563 245-395 (474)
101 cd03785 GT1_MurG MurG is an N- 89.5 3.7 8.1E-05 43.6 11.9 108 410-558 172-281 (350)
102 PLN02205 alpha,alpha-trehalose 88.6 17 0.00037 45.0 17.8 147 406-563 327-493 (854)
103 PF05693 Glycogen_syn: Glycoge 86.7 0.74 1.6E-05 54.1 4.5 53 501-555 440-499 (633)
104 COG0380 OtsA Trehalose-6-phosp 82.2 1.1E+02 0.0023 35.8 22.9 132 422-565 283-423 (486)
105 KOG1387 Glycosyltransferase [C 80.9 41 0.00089 37.7 14.3 98 462-586 303-400 (465)
106 cd03786 GT1_UDP-GlcNAc_2-Epime 79.8 8.6 0.00019 41.2 9.0 111 411-557 191-304 (363)
107 PF13524 Glyco_trans_1_2: Glyc 79.0 6.8 0.00015 33.8 6.6 33 654-686 58-91 (92)
108 TIGR00215 lpxB lipid-A-disacch 76.3 11 0.00024 41.9 8.8 114 409-560 181-297 (385)
109 TIGR02919 accessory Sec system 53.2 34 0.00075 39.1 7.1 47 505-553 329-375 (438)
110 smart00195 DSPc Dual specifici 32.1 47 0.001 30.9 3.3 39 241-283 78-119 (138)
111 cd00127 DSPc Dual specificity 31.0 53 0.0011 30.2 3.5 38 241-282 81-121 (139)
112 KOG2387 CTP synthase (UTP-ammo 30.4 6E+02 0.013 29.7 11.9 137 400-567 257-413 (585)
113 PRK09814 beta-1,6-galactofuran 30.2 1.1E+02 0.0024 33.0 6.3 69 505-578 208-287 (333)
114 TIGR03568 NeuC_NnaA UDP-N-acet 28.5 6.9E+02 0.015 27.6 12.2 68 505-583 263-330 (365)
115 PF00782 DSPc: Dual specificit 24.0 80 0.0017 29.0 3.3 37 242-282 74-113 (133)
116 PF02684 LpxB: Lipid-A-disacch 23.7 3.3E+02 0.0071 30.7 8.5 110 417-561 180-291 (373)
117 COG0297 GlgA Glycogen synthase 22.3 2.5E+02 0.0055 32.8 7.5 40 38-79 7-46 (487)
No 1
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.3e-200 Score=1601.96 Aligned_cols=672 Identities=53% Similarity=0.893 Sum_probs=631.7
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF 80 (698)
|||+|||+|+|+++||||.+.|.+||.+||+++|++.++|+||+||||||||||+|||||||+||+|++||||||+||+|
T Consensus 88 lEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGiF 167 (843)
T KOG2099|consen 88 LEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGIF 167 (843)
T ss_pred hHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhhH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 005402 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (698)
Q Consensus 81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~ 160 (698)
+|+|.+|||+|.||+||+++||||+.|+++++||+|||+|++.++| .+|++|+.|.|+|||+|||||+|.++|+||||+
T Consensus 168 ~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLWs 246 (843)
T KOG2099|consen 168 KQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLWS 246 (843)
T ss_pred HHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeeec
Confidence 9999999999999999999999999999999999999999988877 579999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCc-----
Q 005402 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANV----- 235 (698)
Q Consensus 161 ~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~----- 235 (698)
|+ +.++|||..||.|+|.+|+.+++.+++||.+|||+|+..+||+||||||||+|+||+|||||||++..+|-|
T Consensus 247 ak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~~~ 325 (843)
T KOG2099|consen 247 AK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPVRT 325 (843)
T ss_pred cC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCccccccc
Confidence 99 777999999999999999999999999999999999999999999999999999999999999998777633
Q ss_pred ccccCCccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHH
Q 005402 236 NWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIE 315 (698)
Q Consensus 236 ~l~~l~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~ 315 (698)
.+++||++++||||||||+||||||||+|||.+||+|++||+||.+||.|||||++|||+|+||++||+++||||++||+
T Consensus 326 ~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleIIy 405 (843)
T KOG2099|consen 326 NFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEIIY 405 (843)
T ss_pred chhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHHH
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHhhhCCCChhhHHHHHhcceEEecccccccc--eeeccccccCCCCCCCcccccccccCCCc--h-----
Q 005402 316 MIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF--ADLFVKTKESTDVVPDDELENCDEEGGPV--D----- 386 (698)
Q Consensus 316 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v--a~l~~~~~~~~~~~~~~~i~~~t~g~h~~--~----- 386 (698)
+||++|+..+.++||+ |.+++.+||++++...+|+| ||||+.+||.++++ ...|+- |
T Consensus 406 ~In~~~l~~i~~~fp~-----D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGV---------a~iHSeilK~~~F~ 471 (843)
T KOG2099|consen 406 EINQRFLQTVAAKFPG-----DVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGV---------AEIHSEILKQSVFK 471 (843)
T ss_pred HHHHHHHHHHHHHCCC-----cHHHHhhhhhhhcCCccceeeeeeeeeecccccccH---------HHHHHHHHHHHHHH
Confidence 9999999999999999 89999999999993345777 99999555544431 111221 2
Q ss_pred hh--h--hhhh--hcCCCH---------------------------------------------------HHHHHHHHHH
Q 005402 387 EE--L--ESAQ--EDGVLE---------------------------------------------------EESTDVVSFI 409 (698)
Q Consensus 387 ~~--l--~k~~--tngi~~---------------------------------------------------~~K~~l~~~l 409 (698)
++ | +||+ ||||+| +||.+++++|
T Consensus 472 Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ige~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~l 551 (843)
T KOG2099|consen 472 DFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIGEEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYL 551 (843)
T ss_pred HHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhhhHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHH
Confidence 22 3 8888 999987 8999999999
Q ss_pred HHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHH
Q 005402 410 KEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD 489 (698)
Q Consensus 410 ~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~ 489 (698)
.+++|+.++|+++||+||||+||||||.||+|+++.||.+||+ +|. +.++|++++|+|||+|+|++||.|||+|.+
T Consensus 552 e~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~---k~fvprtvm~GGKaapgY~mAK~Iiklit~ 627 (843)
T KOG2099|consen 552 EKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPA---KAFVPRTVMIGGKAAPGYHMAKLIIKLITA 627 (843)
T ss_pred HHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhh---hccCceEEEEcCccCchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987 444 347899999999999999999999999999
Q ss_pred HhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccC
Q 005402 490 VGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE 569 (698)
Q Consensus 490 ~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~ 569 (698)
++.+||+||.+.++|||+|++||+|++|++|+||||+++++|++|+||||||+||+|+||+++|||+||+||||.|++|+
T Consensus 628 V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~Ge 707 (843)
T KOG2099|consen 628 VADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGE 707 (843)
T ss_pred HHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeecccchhhhhhhhhccCC--CCCCCChhHHHHHhhhhcCCCCCCC---HHHHHHhhccCCCCCCCccccccCChhH
Q 005402 570 ENFFLFGARAHEIAGLRKERSE--GKFVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPS 644 (698)
Q Consensus 570 ~N~~~fG~~~d~V~~~~~~~~~--~~~~~~~~~~~v~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~D~y~v~~Df~s 644 (698)
+|+|+||.++|+|..+++++.. ..|..+|++++|++.+.+|+|++.+ +.++++.+.+ .|+|+|++||+|
T Consensus 708 eN~FiFG~~~e~V~~L~k~gy~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~------hD~f~V~~Df~s 781 (843)
T KOG2099|consen 708 ENFFIFGMRVEDVEALRKKGYNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMY------HDYFLVFADFEA 781 (843)
T ss_pred ccEEEecccHHHHHHHHhhcccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhc------cceEEeeCcHHH
Confidence 9999999999999999987422 2377899999999999999999887 5555666653 499999999999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcccccCCC
Q 005402 645 YLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 698 (698)
Q Consensus 645 y~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~~~~~~p 698 (698)
|++||++|+++|+|+++|.+|++.|+|.+|+|||||||.|||++||+|+|+++|
T Consensus 782 Yi~~q~kVd~~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa~eIWnvep~~~~ 835 (843)
T KOG2099|consen 782 YIKCQEKVDQLYRNQKEWLKMSILNIAGSGKFSSDRTIAEYAREIWNVEPSELP 835 (843)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHhhhcccccCccchHHHHHHHhcCCCcccCC
Confidence 999999999999999999999999999999999999999999999999999865
No 2
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=3.2e-196 Score=1665.81 Aligned_cols=669 Identities=42% Similarity=0.716 Sum_probs=627.2
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF 80 (698)
|||||||+|.|||+|||++++++|||++||+++|+++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 66 ~EfL~Gr~l~nnl~nlgl~~~~~~al~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F 145 (798)
T PRK14985 66 MEFLIGRLTGNNLLNLGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLF 145 (798)
T ss_pred hhhhccHHHHHHHHhcCCHHHHHHHHHHcCCCHHHHhccCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 005402 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (698)
Q Consensus 81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~ 160 (698)
+|+|+||+|+|.||.|+..++||+.++++..++|+|+|+++.. +|+.+|+++..|.|+|||+|||||+++++|+||||+
T Consensus 146 ~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~-~G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~ 224 (798)
T PRK14985 146 RQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGGKVTKQ-DGRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQ 224 (798)
T ss_pred EEEEECCeEEECCCCcccCCCCceecCCCceEEEeeCCEEEee-CCcEEEECCEEEEEEeccccccCCCCCceEEEEEeE
Confidence 9999999999999999999999999999999999999998753 788899999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCcccccC
Q 005402 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240 (698)
Q Consensus 161 ~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~l 240 (698)
+++++ +|||..||+|+|.+++++++.+|+||++|||+|++++||++||||||||||||+|||||+|++. | ++|+.|
T Consensus 225 a~~~~-~~~l~~fn~gdy~~a~en~~~~e~It~~LYp~D~~~~Gk~lRLkQEyfl~sa~vqdilr~~~~~--~-~~l~~l 300 (798)
T PRK14985 225 ATHAH-PFDLTKFNDGDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLA--G-RKLHEL 300 (798)
T ss_pred cCCCC-ccCHHHcCCcchhhccccchhhcchhceecCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhc--C-CChhhC
Confidence 99654 8999999999999999999999999999999999999999999999999999999999999974 3 799999
Q ss_pred CccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhHH
Q 005402 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEE 320 (698)
Q Consensus 241 ~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~~ 320 (698)
+++++|||||||||||+|||||+|+|++|++|++||++|+++|+||||||||||||+||++||+++||||++||++||.+
T Consensus 301 ~~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~ 380 (798)
T PRK14985 301 PDYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTR 380 (798)
T ss_pred CCCcEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCChhhHHHHHhcceEEecccccccc--eeeccccccCCCCCCC-------------------ccccccc
Q 005402 321 LVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF--ADLFVKTKESTDVVPD-------------------DELENCD 379 (698)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v--a~l~~~~~~~~~~~~~-------------------~~i~~~t 379 (698)
|+..+...+|+ +.+.+.+||||++ + .| |+||+.+|+.+|++.. .++.++|
T Consensus 381 fl~~~~~~~~~-----d~~~~~~~sii~~-~---~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~p~kf~nvT 451 (798)
T PRK14985 381 FKTLVEKTWPG-----DKKVWAKLAVVHD-K---QVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVT 451 (798)
T ss_pred HHHHHHHhCCC-----cHHHhhhhhhccC-C---eeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhCCCccCCcC
Confidence 99999999998 7788899999998 4 45 8999988887766411 2357889
Q ss_pred ccCCCc----------hhhhh-----hhhh---------------------cCCCHHHHHHHHHHHHHHhCCCCCCCCce
Q 005402 380 EEGGPV----------DEELE-----SAQE---------------------DGVLEEESTDVVSFIKEKTGYSVSPDAMF 423 (698)
Q Consensus 380 ~g~h~~----------~~~l~-----k~~t---------------------ngi~~~~K~~l~~~l~~~~g~~~~~~~~~ 423 (698)
||+|.. ++.++ .|.+ ..++.++|.+|+++|+++.|..+||+++|
T Consensus 452 NGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slf 531 (798)
T PRK14985 452 NGITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIF 531 (798)
T ss_pred CCcCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcc
Confidence 999985 01111 1111 01123899999999999999999999999
Q ss_pred eeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCc
Q 005402 424 DIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDL 503 (698)
Q Consensus 424 ~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~ 503 (698)
|+||||||+||||+||+|++++||.+|++ +|... ++|+||||||||||+|..||+|||+|+++|++||+||.++++
T Consensus 532 dvq~kR~heYKRq~Lnil~ii~~y~~i~~-~p~~~---~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~ 607 (798)
T PRK14985 532 DVQIKRLHEYKRQHLNLLHILALYKEIRE-NPQAD---RVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDK 607 (798)
T ss_pred hhhHhhhhhhhhhhhHhhhhHHHHHHHHh-CCCcC---CCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCc
Confidence 99999999999999999999999999986 54433 579999999999999999999999999999999999999999
Q ss_pred ceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhh
Q 005402 504 LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIA 583 (698)
Q Consensus 504 lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~ 583 (698)
|||||+|||+|++|++|+||||||+|+|+||+||||||||||||||+|+|||+||||+||++++|++|+|+||.++++|.
T Consensus 608 lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev~ 687 (798)
T PRK14985 608 LKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVK 687 (798)
T ss_pred eeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCC---CCCChhHHHHHhhhhcCCCCCCC---HHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc
Q 005402 584 GLRKERSEGK---FVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 657 (698)
Q Consensus 584 ~~~~~~~~~~---~~~~~~~~~v~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~ 657 (698)
+++..+ |++ |+.+|++++|+|.+.+|+|++.+ |++|+++|..+ +|+|||++||+||++||++|..+|.
T Consensus 688 ~~~~~~-y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~y~ 761 (798)
T PRK14985 688 ALLAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSLKQG-----GDPYLVLADFAAYVEAQKQVDALYR 761 (798)
T ss_pred HHHHcC-CChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHHHHhhC-----CCeeEeeccHHHHHHHHHHHHHHhc
Confidence 998776 664 77999999999999999998765 99999999754 8999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhccc
Q 005402 658 DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNII 693 (698)
Q Consensus 658 d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~~ 693 (698)
|+++|++|++.|||++|.|||||||+|||++||+++
T Consensus 762 d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~~ 797 (798)
T PRK14985 762 DQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAK 797 (798)
T ss_pred CHHHHHHHHHHHHHccCCcCcHHHHHHHHHHhhCCC
Confidence 999999999999999999999999999999999985
No 3
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=100.00 E-value=1.3e-195 Score=1663.05 Aligned_cols=672 Identities=50% Similarity=0.848 Sum_probs=627.8
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF 80 (698)
|||||||+|.|||+|||+.+++++||++||+++|+++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 57 ~EfL~Gr~l~nnl~nlgl~~~~~~~l~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F 136 (794)
T TIGR02093 57 AEFLMGRLLGNNLLNLGLYDEVKEALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLF 136 (794)
T ss_pred hhhhcchHHHHHHHhCCCHHHHHHHHHHhCCCHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCce
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCC-CC--eeeeCCeeEEEEEEeecCCCCCCCCeEEEE
Q 005402 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSD-GK--SHWIGGEDIKAVAYDIPIPGYKTKTTINLR 157 (698)
Q Consensus 81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~d-g~--~~w~~~~~v~a~~ydv~i~g~~~~~~~~lr 157 (698)
+|+|.||||+|.||+|+..++|||++|++.+++|+|+|+|+...| |+ .+|++++.|+|+|||+|+|||+++++|+||
T Consensus 137 ~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LR 216 (794)
T TIGR02093 137 KQKIVDGWQVELPDDWLRYGNPWEIRRPDRSYEVRFGGRVELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLR 216 (794)
T ss_pred EEEEECCEEEEcCCCcCCCCCCceeecCCcEEEEEeCCEEeeeccCCcceeEeeCceEEEEeecceeecCCCCCceEEEE
Confidence 999999999999999999999999999999999999999976544 53 349999999999999999999999999999
Q ss_pred EEEecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCccc
Q 005402 158 LWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNW 237 (698)
Q Consensus 158 lw~~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l 237 (698)
||+++ +.+.|||..||.|+|.+++++++.+|+||++|||+|++++||++|||||||||+||+|||||+|++.+ ..|
T Consensus 217 LW~a~-~~~~f~l~~fn~gdy~~a~~~~~~~e~It~vLYp~D~~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~---~~l 292 (794)
T TIGR02093 217 LWSAE-APEEFDLDAFNAGDYYEAVEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETH---PDL 292 (794)
T ss_pred EEEec-CccccCHhhccCccHhhhhhChhhcCccccCCcCCCCccchHHHHHHHHHHhhhhHHHHHHHHHHHhC---CCh
Confidence 99999 56679999999999999999999999999999999999999999999999999999999999999875 589
Q ss_pred ccCCccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHh
Q 005402 238 EEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMI 317 (698)
Q Consensus 238 ~~l~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i 317 (698)
+.|+++++|||||||||||+|||||+|+|++|++|++||++|+++|+||||||||||||+||++||+++||||++||++|
T Consensus 293 ~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~I 372 (794)
T TIGR02093 293 SDFPKKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEI 372 (794)
T ss_pred hhCCcceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhhCCCChhhHHHHHhcceEEecccccccc--eeeccccccCCCCCCC-------------------cccc
Q 005402 318 DEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF--ADLFVKTKESTDVVPD-------------------DELE 376 (698)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v--a~l~~~~~~~~~~~~~-------------------~~i~ 376 (698)
|.+|+..+.+.+|+ +.+.+.+||||++ +..++| |+||+.+|+.+|++.. -.+.
T Consensus 373 n~~fl~~~~~~~p~-----d~~~~~~~sii~~-~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~P~kf~ 446 (794)
T TIGR02093 373 NRRFLAELAAKGPG-----DEAKIRRMSIIEE-GQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFN 446 (794)
T ss_pred hHHHHHHHHHhCCC-----cHHHHhheeeeec-CCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccC
Confidence 99999999999999 8899999999998 444456 9999999987777422 2357
Q ss_pred cccccCCCc----------hhhhh-----hhhh---------------------cCCCHHHHHHHHHHHHHHhCCCCCCC
Q 005402 377 NCDEEGGPV----------DEELE-----SAQE---------------------DGVLEEESTDVVSFIKEKTGYSVSPD 420 (698)
Q Consensus 377 ~~t~g~h~~----------~~~l~-----k~~t---------------------ngi~~~~K~~l~~~l~~~~g~~~~~~ 420 (698)
++|||+|.. .+.++ .|.+ ..++.++|.+|+++|++++|..+||+
T Consensus 447 n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~ 526 (794)
T TIGR02093 447 NKTNGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPN 526 (794)
T ss_pred CcCCCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCcc
Confidence 788888874 00011 1110 01122899999999999999999999
Q ss_pred CceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 421 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 421 ~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
++||+||||||+||||+||+|++++||.+|++ +|+.. .+|+||||||||||+|..||+|||+|+++|++||+||.+
T Consensus 527 slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~~---~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v 602 (794)
T TIGR02093 527 SIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKE-DPPKD---IVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAV 602 (794)
T ss_pred ccchhhheechhhhHHHHHHhhhHHHHHHHHh-CCCcC---CCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhh
Confidence 99999999999999999999999999999986 55532 679999999999999999999999999999999999999
Q ss_pred CCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchh
Q 005402 501 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAH 580 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d 580 (698)
+++|||||+|||+|++|++|+||||||+|+|+||+|||||||||||+||+|+|||+|||||||++++|++|+|+||.+++
T Consensus 603 ~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ 682 (794)
T TIGR02093 603 GDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVE 682 (794)
T ss_pred CCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCCCC---CCCChhHHHHHhhhhcCCCCCCC---HHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHH
Q 005402 581 EIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 654 (698)
Q Consensus 581 ~V~~~~~~~~~~~---~~~~~~~~~v~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~ 654 (698)
+|.+++..+ |++ |+.+|++++++|.+.+|+|++.+ |++|+++|..+ +|+|||++||+||++||++|..
T Consensus 683 ev~~~~~~~-Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~l~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~ 756 (794)
T TIGR02093 683 EVEALREKG-YNPREYYEADPELKRVLDLISSGTFSPGDPGLFRPLYDSLLNH-----GDPFFVLADFAAYVDAQERVDA 756 (794)
T ss_pred HHHHHHHcC-CCchhcccCCHHHHHHHHHHhcCCCCCCCchHHHHHHHHHccC-----CCeeeeeccHHHHHHHHHHHHH
Confidence 999998776 664 77999999999999999998654 99999999854 8999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005402 655 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 655 ~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~ 692 (698)
+|.|+++|++|++.|+|++|+|||||||+|||++||++
T Consensus 757 ~Y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 794 (794)
T TIGR02093 757 LYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794 (794)
T ss_pred HhcCHHHHHHHHHHHHhCCCCcCCchhHHHHHHHhhCc
Confidence 99999999999999999999999999999999999985
No 4
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=7.6e-194 Score=1651.77 Aligned_cols=675 Identities=45% Similarity=0.788 Sum_probs=630.1
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF 80 (698)
|||||||+|.|||+|||+.+++++||++||+++|+++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 77 ~EfL~Gr~l~nnl~nlg~~~~~~~al~~lg~~l~~l~~~E~Da~LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F 156 (815)
T PRK14986 77 MEFLIGRTLSNALLSLGIYDDVQGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMF 156 (815)
T ss_pred hhhhccHHHHHHHHhcCcHHHHHHHHHHcCCCHHHHHhcCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCCCCe-eeeCCeeEEEEEEeecCCCCCCCCeEEEEEE
Q 005402 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKS-HWIGGEDIKAVAYDIPIPGYKTKTTINLRLW 159 (698)
Q Consensus 81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~dg~~-~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw 159 (698)
+|+|.||||+|.||+|+..++||+++|++.+++|+|+|+++. +|.. +|+++++|+|+|||+|||||.|+++|+||||
T Consensus 157 ~Q~I~dG~Q~E~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~--~g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW 234 (815)
T PRK14986 157 KQNIVNGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQ--EGKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLW 234 (815)
T ss_pred EEEEECCEEEEcCCCccCCCCceeEecCCcEEEEEeCCEEEe--cCceeEeeCCeeEEEEeCCccccCCCCCceEEEEEE
Confidence 999999999999999999999999999999999999999975 3543 4999999999999999999999999999999
Q ss_pred EecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCccccc
Q 005402 160 STMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEE 239 (698)
Q Consensus 160 ~~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~ 239 (698)
+++ +.++||+..||.|+|..++.+++.+|+||++|||+|++++||++|||||||||+||+|||||+|++.+ ++|+.
T Consensus 235 ~a~-~~~~fd~~~fn~g~y~~a~~~~n~~e~Is~~LYp~D~~y~Gk~lRLkQEyfl~~agv~di~r~~~~~~---~~l~~ 310 (815)
T PRK14986 235 SAQ-ASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLH---KTYDN 310 (815)
T ss_pred Eee-cCcccCHhhcccccHHHHhhccchhhccccccCCCCCCcccHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCHhh
Confidence 999 56789999999999999999999999999999999999999999999999999999999999999986 68999
Q ss_pred CCccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhH
Q 005402 240 FPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDE 319 (698)
Q Consensus 240 l~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~ 319 (698)
|+++++||||||||||++|||||+|+|++|++|++||++|+++|+||||||||||||+||++||+++||||++||++||.
T Consensus 311 l~~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~ 390 (815)
T PRK14986 311 LADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEIND 390 (815)
T ss_pred CCcccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhCCCChhhHHHHHhcceEEecccccccc--eeeccccccCCCCCCC-----------------cc--cccc
Q 005402 320 ELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF--ADLFVKTKESTDVVPD-----------------DE--LENC 378 (698)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v--a~l~~~~~~~~~~~~~-----------------~~--i~~~ 378 (698)
+|+..+.+++|+ +.+.+.+||||++ +..+.| ++||+.+|+.+|++.. .| +..+
T Consensus 391 ~fl~~~~~~~~~-----~~~~~~~~sii~~-~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~P~kf~ni 464 (815)
T PRK14986 391 YFLKTLQEQYPN-----DTDLLGRASIIDE-SNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNV 464 (815)
T ss_pred HHHHHHHHhCCC-----cHHHHhhhhcccc-CCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhCCCccccc
Confidence 999999999999 7889999999998 433355 9999999987776411 13 6668
Q ss_pred cccCCCc----------hhhhh-----hhhh---------------------cCCCHHHHHHHHHHHHHHhCCCCCCCCc
Q 005402 379 DEEGGPV----------DEELE-----SAQE---------------------DGVLEEESTDVVSFIKEKTGYSVSPDAM 422 (698)
Q Consensus 379 t~g~h~~----------~~~l~-----k~~t---------------------ngi~~~~K~~l~~~l~~~~g~~~~~~~~ 422 (698)
|||+|.. ++.++ .|.+ ..++.++|.+|+++|++++|..+||+++
T Consensus 465 TNGV~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sL 544 (815)
T PRK14986 465 TNGVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKAL 544 (815)
T ss_pred CCCCChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccc
Confidence 8999864 00011 1110 0112289999999999999999999999
Q ss_pred eeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCC
Q 005402 423 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 502 (698)
Q Consensus 423 ~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~ 502 (698)
||+|+||||+||||+||+|++++||.+|++ +|... .+|+||||||||||+|..||+|||+|+++|++||+||.+++
T Consensus 545 fd~qakR~heYKRq~LNil~~i~ry~~i~~-~p~~~---~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 545 FDVQIKRIHEYKRQLMNVLHVITRYNRIKA-DPDAK---WVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred eeeeehhhhhhhhhhHHHhhhHHHHHHHHh-CCCcC---CCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcC
Confidence 999999999999999999999999999986 54422 57999999999999999999999999999999999999999
Q ss_pred cceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhh
Q 005402 503 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEI 582 (698)
Q Consensus 503 ~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V 582 (698)
+|||||+|||+|++|++|+||||||+|+|+||+||||||||||||||+|++||+||||+||++++|++|+|+||.++|+|
T Consensus 621 ~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev 700 (815)
T PRK14986 621 KLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEV 700 (815)
T ss_pred ceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCC---CCCChhHHHHHhhhhcCCCCCCC---HHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHh
Q 005402 583 AGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY 656 (698)
Q Consensus 583 ~~~~~~~~~~~---~~~~~~~~~v~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y 656 (698)
.+++.++ |++ |+.+|++++++|.+.+|+|++.+ |++|+++|..+ +|+|||++||+||++||++|..+|
T Consensus 701 ~~~~~~~-Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~aq~~v~~~y 774 (815)
T PRK14986 701 EALRRQG-YKPREYYEKDEELHQVLTQIGSGVFSPEEPGRYRDLVDSLINF-----GDHYQVLADYRSYVDCQDKVDELY 774 (815)
T ss_pred HHHHHcC-CChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHHHhccC-----CCeeEeeccHHHHHHHHHHHHHHh
Confidence 9998776 664 77899999999999999998664 99999999854 899999999999999999999999
Q ss_pred cCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcccccCC
Q 005402 657 CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 697 (698)
Q Consensus 657 ~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~~~~~~ 697 (698)
+|+++|.+|++.|||++|.|||||||+|||++||+++||++
T Consensus 775 ~d~~~W~~~~i~Nia~~G~FSsDRtI~~Ya~~IW~~~p~~~ 815 (815)
T PRK14986 775 RNQEEWTRKAMLNIANMGYFSSDRTIKEYADEIWHIDPVRL 815 (815)
T ss_pred cCHHHHHHHHHHHHhCCCCcCCchhHHHHHHHhhCCCccCC
Confidence 99999999999999999999999999999999999999874
No 5
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=100.00 E-value=1.9e-193 Score=1651.02 Aligned_cols=673 Identities=52% Similarity=0.858 Sum_probs=626.2
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF 80 (698)
|||||||+|.|||+|||+.++++|||++||+++|+++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 60 ~EfL~Gr~L~nnl~nLgl~~~~~~~L~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F 139 (797)
T cd04300 60 LEFLMGRLLGNNLLNLGLYDEVREALAELGVDLEDLEEQEPDAGLGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLF 139 (797)
T ss_pred hhhhcchHHHHHHHhCCcHHHHHHHHHHhCCCHHHHHhcCCCCCCCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCC-CCe--eeeCCeeEEEEEEeecCCCCCCCCeEEEE
Q 005402 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSD-GKS--HWIGGEDIKAVAYDIPIPGYKTKTTINLR 157 (698)
Q Consensus 81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~d-g~~--~w~~~~~v~a~~ydv~i~g~~~~~~~~lr 157 (698)
+|+|++|||+|.||+|+..++|||++|++.+++|+|+|+++...| |+. +|++++.|+|+|||+|||||+++++|+||
T Consensus 140 ~Q~i~~G~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~~~~~~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LR 219 (797)
T cd04300 140 KQKIVDGYQVELPDNWLRYGNPWEIRRPDVAVPVRFGGRVEHYEDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLR 219 (797)
T ss_pred EEEEECCEEEecCCCccCCCCCceEecCCcEEEEEECCEEEEeecCCcceeeecCcceEEeeecceeecCCCCCceEEEE
Confidence 999999999999999999999999999999999999999975443 643 49999999999999999999999999999
Q ss_pred EEEecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCccc
Q 005402 158 LWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNW 237 (698)
Q Consensus 158 lw~~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l 237 (698)
||+++ +...|||++||.|+|.+++++++.+|+||++|||+|++++||++|||||||||+||+|||||+|++.+ ..+
T Consensus 220 LW~a~-~~~~~dl~~fn~gdy~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~---~~~ 295 (797)
T cd04300 220 LWSAE-ASEEFDLDAFNRGDYIRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKTH---GPL 295 (797)
T ss_pred EEEee-CCCCcCHHHhcCCchhhHHhhHHHhhhhhcccCCCCCchhHHHHHHHHHHHHhhhHHHHHHHHHHHhC---CCh
Confidence 99999 45579999999999999999999999999999999999999999999999999999999999999986 478
Q ss_pred ccCCccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHh
Q 005402 238 EEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMI 317 (698)
Q Consensus 238 ~~l~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i 317 (698)
+.|+++++|||||||||||+|||||+|+|++|++|++||++|+++|+||||||||||||+||++||+++||||++||++|
T Consensus 296 ~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~I 375 (797)
T cd04300 296 SEFPDKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEI 375 (797)
T ss_pred hhCCCceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhhCCCChhhHHHHHhcceEEecccccccc--eeeccccccCCCCCCC-------------------cccc
Q 005402 318 DEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF--ADLFVKTKESTDVVPD-------------------DELE 376 (698)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v--a~l~~~~~~~~~~~~~-------------------~~i~ 376 (698)
|.+|+..+.+++|. +.+.+.+||+|++ +..++| |+||+.+|+.+|++.. ..+.
T Consensus 376 n~~~~~~~~~~~~~-----~~~~~~~l~ii~~-~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~ 449 (797)
T cd04300 376 NRRFLEEVRAKYPG-----DEDRIRRMSIIEE-GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFN 449 (797)
T ss_pred HHHHHHHHHHhcCC-----CHHHHHhhccccc-CCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhCCCccC
Confidence 99999999999998 8899999999987 444456 9999999997777421 2457
Q ss_pred cccccCCCc----------hhhhh-----hhhh---------------------cCCCHHHHHHHHHHHHHHhCCCCCCC
Q 005402 377 NCDEEGGPV----------DEELE-----SAQE---------------------DGVLEEESTDVVSFIKEKTGYSVSPD 420 (698)
Q Consensus 377 ~~t~g~h~~----------~~~l~-----k~~t---------------------ngi~~~~K~~l~~~l~~~~g~~~~~~ 420 (698)
++|||+|.. .+.++ .|.+ ..++.++|.+|+++|+++.|+.+||+
T Consensus 450 n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~ 529 (797)
T cd04300 450 NKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPD 529 (797)
T ss_pred CcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence 788888874 00011 1100 01223899999999999999999999
Q ss_pred CceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 421 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 421 ~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
++||+||||||+||||+||+|++++||.+|++ +|... .+|+||||||||||+|..||+|||+|+++|++||+||.+
T Consensus 530 slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~~---~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v 605 (797)
T cd04300 530 SLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKE-NPNAD---IVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDV 605 (797)
T ss_pred ccEEEEeeechhhhhhhhHHHhhHHHHHHHHh-CCCcC---CCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhc
Confidence 99999999999999999999999999999986 54422 579999999999999999999999999999999999999
Q ss_pred CCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchh
Q 005402 501 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAH 580 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d 580 (698)
+++|||||+|||+|++|++|+||||||+|+|+||+||||||||||||||+|+|||+||||+||++++|++|+|+||.+++
T Consensus 606 ~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ 685 (797)
T cd04300 606 GDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAE 685 (797)
T ss_pred CCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCCC--CCCCChhHHHHHhhhhcCCCCCCC---HHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHH
Q 005402 581 EIAGLRKERSEG--KFVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 655 (698)
Q Consensus 581 ~V~~~~~~~~~~--~~~~~~~~~~v~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~ 655 (698)
+|.+++..+.+. .|+.+|.+++|+|.+.+|+|++.+ |++|+++|..+ +|+|||++||+||++||++|..+
T Consensus 686 ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~~Y~~~q~~v~~~ 760 (797)
T cd04300 686 EVEALRANGYYPADYYEADPELRRVLDQIASGFFSPGDPGEFRPLVDSLLNG-----NDEYLVLADFESYVDAQEKVDAL 760 (797)
T ss_pred HHHHHHHcCCChHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHccC-----CCeeEeeccHHHHHHHHHHHHHH
Confidence 999998876322 378999999999999999997543 99999999854 89999999999999999999999
Q ss_pred hcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005402 656 YCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 656 Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~ 692 (698)
|.|+++|.+|++.|||++|.|||||||+|||++||++
T Consensus 761 Y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 797 (797)
T cd04300 761 YRDQEEWARKSILNIARSGKFSSDRTIREYAEDIWNV 797 (797)
T ss_pred ccCHHHHHHHHHHHHHccCCcCCcccHHHHHHHhhCc
Confidence 9999999999999999999999999999999999985
No 6
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=100.00 E-value=7.3e-189 Score=1593.40 Aligned_cols=649 Identities=49% Similarity=0.841 Sum_probs=560.6
Q ss_pred HHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeecccccccCCCCcc
Q 005402 25 ALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWE 104 (698)
Q Consensus 25 ~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF~Q~i~dG~Q~E~pd~Wl~~~npwe 104 (698)
||++||+++|+|+++|+||+||||||||||||||||+|+||+|++||||||+||+|+|+|.||+|+|.||+||..|||||
T Consensus 1 Al~~lg~~~~~l~~~E~da~LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe 80 (713)
T PF00343_consen 1 ALKELGFDLEELEEQEPDAGLGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWE 80 (713)
T ss_dssp HHHHTT--HHHHHTTS--EEESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTS
T ss_pred ChhHhCCCHHHHHhhCcCccccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEeeeCCEEeeCCCCCe-eeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEecCCCCcccccccCCCchhhHHH
Q 005402 105 IERNDVSYPVKFYGKIVPGSDGKS-HWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAE 183 (698)
Q Consensus 105 ~~~~~~~~~V~~~G~v~~~~dg~~-~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~~~v~~~~~~l~~~~~~~~~~a~~ 183 (698)
++|++.+|+|+|+|+|+ +.+|+. +|+++++|+|+|||+|||||+++++|+||||+|+ +.++|||..||.|+|.+|++
T Consensus 81 ~~r~~~~~~V~f~G~v~-~~~~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~-~~~~fd~~~fn~gdy~~a~~ 158 (713)
T PF00343_consen 81 IRRPDESYEVKFGGRVE-DDGGRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAE-PSEEFDLESFNRGDYIKAVE 158 (713)
T ss_dssp EEEGGGEEEEEESEEEE--EETTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEE-ESSSTTHHHHHTTCHHHHHH
T ss_pred EecCCceEEEeccceEE-ecCCCcccccCCeEEEEEecCceeecCCCCceEEEEEeccC-CCcccChhhcCCCcHHHHHH
Confidence 99999999999999998 444554 4999999999999999999999999999999999 88899999999999999999
Q ss_pred HhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCcccccCCccceEecCCCcccchHHHHHHH
Q 005402 184 ALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRI 263 (698)
Q Consensus 184 ~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~l~~~~~ihlNE~Hpa~~i~El~R~ 263 (698)
+++.+++||++|||+|++++||+|||||||||+|||||||||+|++.+ .+|++||++++||||||||||++|||||+
T Consensus 159 ~~~~~e~is~vLYP~d~~~~Gk~LRLkQqyf~vsa~lqdiir~~~~~~---~~~~~~~~~~~ihlNdtHpa~ai~ElmR~ 235 (713)
T PF00343_consen 159 EKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKSH---GDLREFPDKVVIHLNDTHPAFAIPELMRI 235 (713)
T ss_dssp HHHHHHGGGTBSS-SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCGGGHHHHEEEEEESSTTTTHHHHHHHH
T ss_pred HHHHhhceeeecCCCCccccchhhhhhhHhhhhhhHHHHHHHHHHHhC---CChHHCCcceEEeecCCccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987 69999999999999999999999999999
Q ss_pred HHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhHHHHHHHHhhhCCCChhhHHHHHhc
Q 005402 264 LIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKE 343 (698)
Q Consensus 264 l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (698)
|||++|++|++||++|+++|+||||||||||||+||++||+++||||++||++||++|+..+...+|. +...+.+
T Consensus 236 L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~-----d~~~~~~ 310 (713)
T PF00343_consen 236 LMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPG-----DEDQIRR 310 (713)
T ss_dssp HHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT------HHHHHH
T ss_pred HHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcC-----cchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 7788889
Q ss_pred ceEEecccccccc--eeeccccccCCCCCCC-------------------cccccccccCCCc---h-------hhh---
Q 005402 344 TRILENVDLPATF--ADLFVKTKESTDVVPD-------------------DELENCDEEGGPV---D-------EEL--- 389 (698)
Q Consensus 344 ~s~i~~~~~~~~v--a~l~~~~~~~~~~~~~-------------------~~i~~~t~g~h~~---~-------~~l--- 389 (698)
||++++ +.++.| |+||+.+|+.+|++.. .++.++|||+|.. . +.+
T Consensus 311 l~ii~~-~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~ 389 (713)
T PF00343_consen 311 LSIIEE-GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEY 389 (713)
T ss_dssp HSSEET-SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHH
T ss_pred cccccc-cchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHH
Confidence 999988 666667 8999988886666421 2588999999985 0 111
Q ss_pred --hhhhhc---------------------CCCHHHHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHH
Q 005402 390 --ESAQED---------------------GVLEEESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYR 446 (698)
Q Consensus 390 --~k~~tn---------------------gi~~~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~ 446 (698)
+.|.++ .++.++|.+++++++++.|+.+||+++||+||||||+||||+||+|++++|
T Consensus 390 iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~ 469 (713)
T PF00343_consen 390 IGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDR 469 (713)
T ss_dssp HTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHH
T ss_pred hccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHH
Confidence 112110 012288999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhcccccc
Q 005402 447 YKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASEL 526 (698)
Q Consensus 447 l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv 526 (698)
|.+|++ +|+. +.+|+||||||||||+|..||+|||+|+++|++||+||+++++|||+|+|||||++|++|+|||||
T Consensus 470 y~rik~-~p~~---~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DV 545 (713)
T PF00343_consen 470 YNRIKN-NPNK---KIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDV 545 (713)
T ss_dssp HHHHHH-STTS---CCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SE
T ss_pred HHHHHh-cccC---CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhh
Confidence 999987 5543 257999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhhhhhhccCCCC---CCCChhHHHH
Q 005402 527 SQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEV 603 (698)
Q Consensus 527 ~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~---~~~~~~~~~v 603 (698)
|+|+||||+||||||+||||+||+|+|||+|||||||.+++|++|+|+||.++|+|.+++..+ |++ |+.+|++++|
T Consensus 546 wln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev~~~~~~g-Y~~~~~y~~~~~l~~v 624 (713)
T PF00343_consen 546 WLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEVEELRKNG-YNPREYYENDPELKRV 624 (713)
T ss_dssp EEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHHHHHHHHT--HHHHHHHHSHHHHHH
T ss_pred hhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHHHHHHhcC-CCcccccccCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998775 553 6788999999
Q ss_pred HhhhhcCCCCC---CCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHH
Q 005402 604 KKFVKSGVFGS---YNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDR 680 (698)
Q Consensus 604 ~~~~~~G~F~~---~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~dr 680 (698)
+|.+.+|+|++ ..|++|++++..+ +|+|+|++||+||++||++|..+|.|+++|.+|++.|+|++|.|||||
T Consensus 625 ld~i~~g~f~~~~~~~f~~i~~~~~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~g~FssDr 699 (713)
T PF00343_consen 625 LDQIISGFFSPGDPDEFKPIYDSLLMY-----NDEYLVLADFESYVEAQEKVDKAYRDPKKWNKMSILNIARSGKFSSDR 699 (713)
T ss_dssp HHHHHHTTTTTTSTTTTHHHHHHCHHH-----TTTT-HHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCGGGGBHHH
T ss_pred HHHHhcCCCCCCCchhHHHHHhCcCCC-----CCcchhhhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCchH
Confidence 99999999987 4599999996544 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcccc
Q 005402 681 TIQEYARDIWNIIP 694 (698)
Q Consensus 681 si~eY~~~iw~~~~ 694 (698)
||+|||++||+|+|
T Consensus 700 tI~~Ya~~IW~~~p 713 (713)
T PF00343_consen 700 TIREYAEDIWNVKP 713 (713)
T ss_dssp HHHHHHHHTTTS--
T ss_pred HHHHHHHHhhCCCC
Confidence 99999999999987
No 7
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-157 Score=1335.03 Aligned_cols=625 Identities=44% Similarity=0.707 Sum_probs=545.6
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF 80 (698)
||||+||+|.|||+|+|+.+.++++|+++|++++++...|+|+++| ||||||||||||||||||+|++||||+|++|||
T Consensus 69 ~efL~grl~~~~l~n~g~~~~~~~~l~~~~~~~~e~~~~e~~p~lg-GGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF 147 (750)
T COG0058 69 MEFLIGRLLGNNLWNLGIYDDVQEALKELGYFLMEFGEHESDPGLG-GGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYF 147 (750)
T ss_pred HHHHHHHhhhcchhhhcchHHHHhhHHhhhccHHHHhhcccCcccc-ccHHHHHHhHHHHHHhcCCCceEEEeeecCCce
Confidence 7999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 005402 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (698)
Q Consensus 81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~ 160 (698)
+|++.||||+|.|+.|+..+|||++.|. . + |+|||+||+||++ ++|+||||+
T Consensus 148 ~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~---------------~---------~---a~~~d~~V~g~~~-~~~~lrlW~ 199 (750)
T COG0058 148 RQSDVDGWQVELPDEWLKYGNPWEFLRD---------------A---------E---GVPYDVPVPGYDN-RVVTLRLWQ 199 (750)
T ss_pred eeeccCCceEecchhhhccCCcceeecc---------------c---------C---CceeeeeEEeccC-cEEEEEEEE
Confidence 9998899999999999999999997653 0 1 5889999999998 999999999
Q ss_pred ecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCcccccC
Q 005402 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240 (698)
Q Consensus 161 ~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~l 240 (698)
+++++.+|+|..||.+ ++.+.+|+||++|||+|+ +++||+||||||+||+|||++++...++ .++.+
T Consensus 200 a~~~~~~~~l~~~n~~------e~~~~~~~iT~~LYp~Ds----~elRl~Qeyfl~~agvq~I~~~~~~~~~---~~~~~ 266 (750)
T COG0058 200 AQVGRVPLYLLDFNVG------ENKNDARNITRVLYPGDS----KELRLKQEYFLGSAGVQDILARGHLEHH---DLDVL 266 (750)
T ss_pred EecCccceEeecCCCc------ccchhhhhHHhhcCCCCc----HHHHHhhhheeeeHHHHHHHHHhhhccc---cccch
Confidence 9988878888888877 346788999999999998 7999999999999999999999544431 56655
Q ss_pred CccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhHH
Q 005402 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEE 320 (698)
Q Consensus 241 ~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~~ 320 (698)
++||||||||||++||||+|+|++|++|++||++|+++|+||||||||||||+||++||+++||+|++||++||.+
T Consensus 267 ----~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~ 342 (750)
T COG0058 267 ----ADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINAR 342 (750)
T ss_pred ----hhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhh
Confidence 5679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCC---------ChhhHHHHH------hcceEEecccccccceeeccccccCCCCCCCcccccccccCCCc
Q 005402 321 LVHTIVSEYGTA---------DPDLLEKRL------KETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPV 385 (698)
Q Consensus 321 ~~~~~~~~~~~~---------~~~~~~~~l------~~~s~i~~~~~~~~va~l~~~~~~~~~~~~~~~i~~~t~g~h~~ 385 (698)
|+..++..+|++ +++|+.-.+ |+||.+|...+++++.+++. . .-..||.++|||+|..
T Consensus 343 ~l~~~~~~~~~~~~~~~~~i~~v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~-----~--~~p~~i~nvTNGIt~r 415 (750)
T COG0058 343 FLPEVRLLYLGDLIRRGSPIEEVNMAVLALVGSHSVNGVSKLHSELSKKMWFADFH-----G--LYPEKINNVTNGITPR 415 (750)
T ss_pred hhHHHHhhccccccccCCcccceehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhc-----c--cCccccccccCCcCCc
Confidence 999998887762 144433322 33333333222233333322 1 1257899999999986
Q ss_pred h----hh--h-----hh----hh---------------------hcCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeccc
Q 005402 386 D----EE--L-----ES----AQ---------------------EDGVLEEESTDVVSFIKEKTGYSVSPDAMFDIQVKR 429 (698)
Q Consensus 386 ~----~~--l-----~k----~~---------------------tngi~~~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R 429 (698)
+ .. | ++ |. ...|+.++|+++++.++++.|+.+||+++||+||||
T Consensus 416 rWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kR 495 (750)
T COG0058 416 RWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARR 495 (750)
T ss_pred hhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehh
Confidence 0 00 1 10 10 011222899999999999999999999999999999
Q ss_pred cchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcceEEEE
Q 005402 430 IHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFV 509 (698)
Q Consensus 430 ~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~ 509 (698)
||+||||+||+++++..|..+++ +. ..++|+||||||||+|+.||+|||+|+++|+++|+ ++||+|+
T Consensus 496 iheYKRq~Lnl~~i~~ly~~i~~--d~-----~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~------~lkVvFl 562 (750)
T COG0058 496 IHEYKRQLLNLLDIERLYRILKE--DW-----VPRVQIIFAGKAHPADYAAKEIIKLINDVADVINN------KLKVVFL 562 (750)
T ss_pred hhhhhhhHHhHhhHHHHHHHHhc--CC-----CCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcc------cceEEEe
Confidence 99999999988888888877763 12 23788899999999999999999999999999885 6799999
Q ss_pred cCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhhhhhhcc
Q 005402 510 PDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKER 589 (698)
Q Consensus 510 ~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~ 589 (698)
|||||++|++|+||||||+|+|+||+||||||||||||||+|+|||||||||||++++|++|||+||.++++|..+...+
T Consensus 563 ~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~ 642 (750)
T COG0058 563 PNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADG 642 (750)
T ss_pred CCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888765
Q ss_pred CCCC---CCCChhHHHHHhhhhcCCCCCCC---HHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhcCHHHHH
Q 005402 590 SEGK---FVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWT 663 (698)
Q Consensus 590 ~~~~---~~~~~~~~~v~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~d~~~W~ 663 (698)
.+.. +..+++++.+++.+.+|.|.+.+ +++++++|.. +...|+|++++||.+|++||+++...|++++.|.
T Consensus 643 ~~~~~~y~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~sl~~---~~~~dr~~~~yd~~~Y~~aq~~~~~~~~~~~~W~ 719 (750)
T COG0058 643 YDPNALYYELENEVKPVLDEIIDGRFSPGWKSRFKNLIDSLLP---KFGTDRMMVLYDFKAYVPAQEEVDALYRDQEAWT 719 (750)
T ss_pred cccHHHHHHHhHHHHHHHHHHhcccCCcccHHHHHHHHHHhhh---ccCccHHHHHHHHHHHHHHHHHHHHHHhhhhhhH
Confidence 4332 45678899999999999988744 7888888873 1123999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHhcccc
Q 005402 664 RMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 694 (698)
Q Consensus 664 ~~~~~~ma~~~~FS~drsi~eY~~~iw~~~~ 694 (698)
++++.|+|.+|.|||||||++|+.+||++.|
T Consensus 720 ~~~i~nia~~g~fssDrtI~~Y~~~Iw~~~~ 750 (750)
T COG0058 720 KKAILNIANSGLFSSDRTIREYAGEIWHIGP 750 (750)
T ss_pred HHHHHHHHHcCCCCchhHHHHHHHHhhccCC
Confidence 9999999999999999999999999999875
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=1.6e-119 Score=1046.76 Aligned_cols=533 Identities=23% Similarity=0.322 Sum_probs=440.4
Q ss_pred CCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEec-CCceeecccccccCCCCcccccCC
Q 005402 31 QSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRIT-KDGQEEVAEDWLELGNPWEIERND 109 (698)
Q Consensus 31 ~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF~Q~i~-dG~Q~E~pd~Wl~~~npwe~~~~~ 109 (698)
||||..+.+. +++||||||||||||||||||||+|++||||+|++|||+|+|+ ||||+|.++.|...+.||+.
T Consensus 91 Fs~E~gl~~~--lpiYsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~---- 164 (778)
T cd04299 91 FSMEFGLHES--LPIYSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEP---- 164 (778)
T ss_pred eccccccCCC--CCccCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEE----
Confidence 7899999988 6799999999999999999999999999999999999999999 99999999999988888874
Q ss_pred ceEEeeeCCEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEecCCCCcccccccCCCchhhHHHHhhhcc
Q 005402 110 VSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAE 189 (698)
Q Consensus 110 ~~~~V~~~G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~~~v~~~~~~l~~~~~~~~~~a~~~~~~~r 189 (698)
+ .+++|+. .+ ..||+||+ ++++|+|+++++ .++++++|++.++|. ..+|
T Consensus 165 ----~-------~~~~G~~------~~----v~v~l~g~----~v~~rvw~~~vg--~v~lylLDtd~~~n~----~~~R 213 (778)
T cd04299 165 ----V-------RDADGEP------VR----VSVELPGR----TVYARVWKAQVG--RVPLYLLDTDIPENS----PDDR 213 (778)
T ss_pred ----E-------ecCCCCe------EE----EEEeeCCC----ceEEEEEEEEcC--CCCEEEecCCccccc----hhhc
Confidence 1 2455652 23 34778887 689999999987 478999999998765 5679
Q ss_pred cceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCcccccCCccceEecCCCcccchHHHHHHHHHHhcC
Q 005402 190 KICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKG 269 (698)
Q Consensus 190 ~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~l~~~~~ihlNE~Hpa~~i~El~R~l~d~~g 269 (698)
.||++|||+|+ ++||+||+|||+||++.+ +++ | + ++.+|||||+||||+++||||+|++++|
T Consensus 214 ~iT~~LYg~D~-----~~Rl~Qe~~Lg~agl~~L-r~l----g----~----~pdViH~ND~Haal~~lE~~R~ll~~~g 275 (778)
T cd04299 214 GITDRLYGGDQ-----ETRIQQEILLGIGGVRAL-RAL----G----I----KPTVYHMNEGHAAFLGLERIRELMAEGG 275 (778)
T ss_pred ccccCCCCCcH-----HHHHHHHHHHHHHHHHHH-HHh----C----C----CCeEEEeCCCcHHHHHHHHHHHHHHHcC
Confidence 99999999984 889999999999998754 332 1 1 4779999999999999999999999889
Q ss_pred CCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhHHHHHHHHhhhC---CCChhhHHHHH-----
Q 005402 270 LSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYG---TADPDLLEKRL----- 341 (698)
Q Consensus 270 l~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~~~~~~~~~~~~---~~~~~~~~~~l----- 341 (698)
++|++||++|+.+|+||||||+|+|||+||.++|+++||+|++.++. +.+.+..++..++ ...+||+...|
T Consensus 276 ~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl-~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~ 354 (778)
T cd04299 276 LSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGL-SRDRFLALGRENPGDDPEPFNMAVLALRLAQR 354 (778)
T ss_pred CCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCC-CHHHHhhhccccccCccCceeHHHHHHHhcCe
Confidence 99999999999999999999999999999999999999999887643 4333344555543 23478876655
Q ss_pred -hcceEEecccccccceeeccccccCCCCCCCcccccccccCCCc--h-----hhhhhhh-----h-----------cCC
Q 005402 342 -KETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPV--D-----EELESAQ-----E-----------DGV 397 (698)
Q Consensus 342 -~~~s~i~~~~~~~~va~l~~~~~~~~~~~~~~~i~~~t~g~h~~--~-----~~l~k~~-----t-----------ngi 397 (698)
+.||.+|+.++++|+.. .+++.+.+++||++||||+|.. . +.++++. + ..+
T Consensus 355 vNgVS~lHg~vsr~mf~~-----~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i 429 (778)
T cd04299 355 ANGVSRLHGEVSREMFAG-----LWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDI 429 (778)
T ss_pred eeeecHHHHHHHHHHhhh-----hhccCCcccCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCC
Confidence 34455444223333333 3467788899999999999985 1 1122221 1 112
Q ss_pred CH--------HHHHHHHHHHHHHh-----------------CCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHh
Q 005402 398 LE--------EESTDVVSFIKEKT-----------------GYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKE 452 (698)
Q Consensus 398 ~~--------~~K~~l~~~l~~~~-----------------g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~ 452 (698)
++ ++|.+|++++++++ +.++||+++|||||||||+|||++| ||++++||.+|+.
T Consensus 430 ~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~L-il~dl~rl~~il~ 508 (778)
T cd04299 430 PDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATL-LLRDPERLKRLLN 508 (778)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHH-HHHHHHHHHHHhh
Confidence 22 78888888887765 5669999999999999999999999 9999999999863
Q ss_pred cChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCC
Q 005402 453 MSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 532 (698)
Q Consensus 453 ~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~ 532 (698)
+++ .|+||||+|||||+|+.||++||+|+++++ +|.+++ ||+|+|||||++||+|+|||||||||||
T Consensus 509 --~~~-----~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~----~p~~~~--kVvfle~Yd~~lA~~LvaG~DvwLn~pr 575 (778)
T cd04299 509 --DPE-----RPVQFIFAGKAHPADEPGKELIQEIVEFSR----RPEFRG--RIVFLEDYDMALARHLVQGVDVWLNTPR 575 (778)
T ss_pred --CCC-----CCeEEEEEEecCccchHHHHHHHHHHHHHh----CcCCCC--cEEEEcCCCHHHHHHHHhhhhhcccCCC
Confidence 232 399999999999999999999999999995 899999 9999999999999999999999999999
Q ss_pred CcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCC
Q 005402 533 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVF 612 (698)
Q Consensus 533 ~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F 612 (698)
||+|||||||||||+||+|++||+||||+|+. .+.|||+||.... ..+ +. . -
T Consensus 576 rp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~---~g~nGwaig~~~~-~~~-------------~~--------~---~ 627 (778)
T cd04299 576 RPLEASGTSGMKAALNGGLNLSVLDGWWDEGY---DGENGWAIGDGDE-YED-------------DE--------Y---Q 627 (778)
T ss_pred CCCCCCccchHHHHHcCCeeeecccCcccccc---CCCCceEeCCCcc-ccC-------------hh--------h---c
Confidence 99999999999999999999999999999986 4589999998521 111 00 0 0
Q ss_pred CCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHH-HHhcC-----HHHHHHHHHHHhccC-CCCChHHHHHHH
Q 005402 613 GSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVD-EAYCD-----QKRWTRMSIMNTAGS-SKFSSDRTIQEY 685 (698)
Q Consensus 613 ~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~-~~Y~d-----~~~W~~~~~~~ma~~-~~FS~drsi~eY 685 (698)
+..|+++||+.|+. .+. .+|.+ +++|.+||+++|+.. .+|||+||++||
T Consensus 628 d~~da~~Ly~~Le~------------------------~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY 683 (778)
T cd04299 628 DAEEAEALYDLLEN------------------------EVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREY 683 (778)
T ss_pred chhhHHHHHHHHHH------------------------HHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHH
Confidence 23479999999973 555 45553 789999999999963 599999999999
Q ss_pred HHHHh
Q 005402 686 ARDIW 690 (698)
Q Consensus 686 ~~~iw 690 (698)
.++.|
T Consensus 684 ~~~~Y 688 (778)
T cd04299 684 VERFY 688 (778)
T ss_pred HHHhH
Confidence 99999
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=5.3e-115 Score=992.28 Aligned_cols=535 Identities=23% Similarity=0.308 Sum_probs=435.1
Q ss_pred CCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEec-CCceeecccccccCCCCcccccCC
Q 005402 31 QSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRIT-KDGQEEVAEDWLELGNPWEIERND 109 (698)
Q Consensus 31 ~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF~Q~i~-dG~Q~E~pd~Wl~~~npwe~~~~~ 109 (698)
||||..+++. +++||||||||||||||||||||+|++||||+|+||||+|+|+ ||||+|.+++|+..+.||+.
T Consensus 4 f~~E~g~~~~--~p~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~---- 77 (601)
T TIGR02094 4 FSMEYGLHES--LPIYSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEK---- 77 (601)
T ss_pred EeeccccCCC--CCccCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEE----
Confidence 7899999888 6799999999999999999999999999999999999999999 99999999999999899974
Q ss_pred ceEEeeeCCEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEecCCCCcccccccCCCchhhHHHHhhhcc
Q 005402 110 VSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAE 189 (698)
Q Consensus 110 ~~~~V~~~G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~~~v~~~~~~l~~~~~~~~~~a~~~~~~~r 189 (698)
| .+++|++ ++|++|++|. ++++|+|+++++ .++++++|++..+| ...+|
T Consensus 78 ----~-------~~~~g~~----------~~~~v~i~g~----~~~~rlw~~~~~--~v~lylld~~~~~n----~~~~R 126 (601)
T TIGR02094 78 ----V-------LDTDGKW----------LKISVRIRGR----DVYAKVWRVQVG--RVPLYLLDTNIPEN----SEDDR 126 (601)
T ss_pred ----E-------ecCCCCe----------EEEEEecCCc----EEEEEEEEEEeC--CCCEEEecCCCccc----chhhc
Confidence 1 2345651 4689999994 899999999975 47899999998554 46789
Q ss_pred cceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCcccccCC-ccceEecCCCcccchHHHHHHHHHHhc
Q 005402 190 KICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFP-EKVAVQMNDTHPTLCIPELIRILIDLK 268 (698)
Q Consensus 190 ~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~l~-~~~~ihlNE~Hpa~~i~El~R~l~d~~ 268 (698)
.||++|||+| +++|++||+|||+|++|++ ++++ ++.+|||||+||||+++||||+++ ++
T Consensus 127 ~it~~LY~~D-----~~~R~~Qe~fl~~a~l~~l--------------~~l~~~pdviH~ND~Htal~~~el~r~l~-~~ 186 (601)
T TIGR02094 127 WITGRLYGGD-----KEMRIAQEIVLGIGGVRAL--------------RALGIDPDVYHLNEGHAAFVTLERIRELI-AQ 186 (601)
T ss_pred CccCCCCCCC-----HHHHHHHHHHHHHHHHHHH--------------HHcCCCceEEEeCCchHHHHHHHHHHHHH-Hc
Confidence 9999999998 4889999999999999864 2222 678999999999999999999999 78
Q ss_pred CCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhHHHHHHHHhhhCC--CChhhHHHHHhcceE
Q 005402 269 GLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGT--ADPDLLEKRLKETRI 346 (698)
Q Consensus 269 gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~~~~~~~~~~~~~--~~~~~~~~~l~~~s~ 346 (698)
+++|++||++|+.+|+||||||+|+|+|+||.++++++||++. ++..|+.+++..+...+++ ..++|+...+ ..|-
T Consensus 187 ~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~-~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai-~~S~ 264 (601)
T TIGR02094 187 GLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYA-ANLGLPREQLLALGRENPDDPEPFNMTVLAL-RLSR 264 (601)
T ss_pred CCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhh-hHhCCCHHHHHhhhhhccCccCceeHHHHHH-HhCC
Confidence 9999999999999999999999999999999999999999964 4447888777777766653 2467776665 4444
Q ss_pred Eecccccc--cceeeccccccCCCCCCCcccccccccCCCc----hhh--h-hhhhh-c---------------CC----
Q 005402 347 LENVDLPA--TFADLFVKTKESTDVVPDDELENCDEEGGPV----DEE--L-ESAQE-D---------------GV---- 397 (698)
Q Consensus 347 i~~~~~~~--~va~l~~~~~~~~~~~~~~~i~~~t~g~h~~----~~~--l-~k~~t-n---------------gi---- 397 (698)
..|.+|+. .+..-.....++..+.+..++.+||||+|.. ..+ | .++.. + .+
T Consensus 265 ~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~ 344 (601)
T TIGR02094 265 IANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEE 344 (601)
T ss_pred eeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHH
Confidence 33312221 1111001112345567788999999999985 111 2 33221 1 01
Q ss_pred ----CHHHHHHHHHHHHHH-----------------hCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChh
Q 005402 398 ----LEEESTDVVSFIKEK-----------------TGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAV 456 (698)
Q Consensus 398 ----~~~~K~~l~~~l~~~-----------------~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~ 456 (698)
+.++|.+|.++|+++ +|++++|++|+|+||||||+|||++| |+++++||.+|++ + +
T Consensus 345 l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dL-il~~i~~l~~i~~-~-~ 421 (601)
T TIGR02094 345 LWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFATYKRADL-IFRDLERLARILN-N-P 421 (601)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHH-HHHHHHHHHHHhh-C-C
Confidence 225555566655554 45559999999999999999999999 9999999999864 2 2
Q ss_pred hhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCccc
Q 005402 457 ERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGME 536 (698)
Q Consensus 457 ~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~E 536 (698)
. .|+||||+|||||.|+.||++|++|+++++ +|++++ ||+|++|||+++||+|+||||||||+|+||+|
T Consensus 422 ~-----~pvq~V~~Gka~p~d~~gk~~i~~i~~la~----~~~~~~--kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~E 490 (601)
T TIGR02094 422 E-----RPVQIVFAGKAHPADGEGKEIIQRIVEFSK----RPEFRG--RIVFLENYDINLARYLVSGVDVWLNNPRRPLE 490 (601)
T ss_pred C-----CCeEEEEEEecCcccchHHHHHHHHHHHHh----cccCCC--CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcC
Confidence 2 399999999999999999999999999995 788999 99999999999999999999999999999999
Q ss_pred CCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCC
Q 005402 537 ASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYN 616 (698)
Q Consensus 537 asGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~ 616 (698)
||||||||||+||+|++||+||||+|.. ++.|||+||...+.. + . ..-+.+|
T Consensus 491 acGtsqMka~~nGgL~~sv~DG~~~E~~---~~~nGf~f~~~~~~~---~-----------~-----------~~~d~~d 542 (601)
T TIGR02094 491 ASGTSGMKAAMNGVLNLSILDGWWGEGY---DGDNGWAIGDGEEYD---D-----------E-----------EEQDRLD 542 (601)
T ss_pred CchHHHHHHHHcCCceeecccCcccccC---CCCcEEEECCCcccc---c-----------c-----------ccccCCC
Confidence 9999999999999999999999999976 347999999742211 0 0 0113568
Q ss_pred HHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHH-HHh-cC-----HHHHHHHHHHHhccC-CCCChHHHHHHHHHH
Q 005402 617 YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVD-EAY-CD-----QKRWTRMSIMNTAGS-SKFSSDRTIQEYARD 688 (698)
Q Consensus 617 ~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~-~~Y-~d-----~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~ 688 (698)
+++||+.|+ ++. .+| .+ |+.|.+||+++|+.. .+|||+||+++|.++
T Consensus 543 a~~l~~~L~-------------------------~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 543 AEALYDLLE-------------------------NEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred HHHHHHHHH-------------------------HHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 999999997 554 655 44 567999999999853 389999999999999
Q ss_pred Hhc
Q 005402 689 IWN 691 (698)
Q Consensus 689 iw~ 691 (698)
.|.
T Consensus 598 yy~ 600 (601)
T TIGR02094 598 FYL 600 (601)
T ss_pred hCC
Confidence 874
No 10
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=8e-31 Score=292.98 Aligned_cols=200 Identities=18% Similarity=0.213 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHH
Q 005402 401 ESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQA 480 (698)
Q Consensus 401 ~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~ 480 (698)
.|.+++..|++++|++.+.+.|++++++|+++||+.|| ++.+++.+++. ..|+|+.|+|+|.++.+
T Consensus 274 ~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl-~~~~i~~~l~~-------------~~~~vilG~gd~~le~~ 339 (487)
T COG0297 274 AKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDL-LLEAIDELLEQ-------------GWQLVLLGTGDPELEEA 339 (487)
T ss_pred hhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhH-HHHHHHHHHHh-------------CceEEEEecCcHHHHHH
Confidence 59999999999999999999999999999999999999 99999998753 58999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccc
Q 005402 481 KRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGAN 560 (698)
Q Consensus 481 K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~ 560 (698)
+.+++++ +++ +|.+.+.|++.+||+|++|||+|+|||| +||||++||.||+|||+||
T Consensus 340 ------~~~la~~------~~~--~~~~~i~~~~~la~~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpI------- 396 (487)
T COG0297 340 ------LRALASR------HPG--RVLVVIGYDEPLAHLIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPI------- 396 (487)
T ss_pred ------HHHHHHh------cCc--eEEEEeeecHHHHHHHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcce-------
Confidence 9999995 446 8999999999999999999999999999 9999999999999999999
Q ss_pred hhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCcccccc
Q 005402 561 VEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVG 639 (698)
Q Consensus 561 vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~ 639 (698)
++++| |++|||.+.+.. . ....++|+ |.+.+++++..+|.
T Consensus 397 ---v~~tG--------GLadTV~~~~~~-----------~---~~~~gtGf~f~~~~~~~l~~al~-------------- 437 (487)
T COG0297 397 ---VRETG--------GLADTVVDRNEW-----------L---IQGVGTGFLFLQTNPDHLANALR-------------- 437 (487)
T ss_pred ---EcccC--------CccceecCccch-----------h---ccCceeEEEEecCCHHHHHHHHH--------------
Confidence 78887 799999976532 1 23568999 98889999999997
Q ss_pred CChhHHHHHHHHHHHHhcCHHH-HHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 640 KDFPSYLECQEKVDEAYCDQKR-WTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 640 ~Df~sy~~aq~~a~~~Y~d~~~-W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
+|..+|.+++. |.+++.++|. .+||||.|+++|.+.-
T Consensus 438 -----------rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY 475 (487)
T COG0297 438 -----------RALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELY 475 (487)
T ss_pred -----------HHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHH
Confidence 99999988888 9999999997 7999999999998753
No 11
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.96 E-value=3.8e-28 Score=269.48 Aligned_cols=456 Identities=17% Similarity=0.157 Sum_probs=279.2
Q ss_pred ccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeecccccccCCCCcccccCCceEEeeeC
Q 005402 38 SQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFY 117 (698)
Q Consensus 38 ~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~ 117 (698)
..|..+..-.||||...++.-++++.+|..+.-+.-+|....- .++ . .++ ....+.+.+.
T Consensus 6 ~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~------~~~--------~-----~~~-~~~~~~~~~~ 65 (476)
T cd03791 6 ASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILD------ELR--------G-----QLL-VLRLFGVPVG 65 (476)
T ss_pred EccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhh------Hhc--------c-----CeE-EEEEEeeccC
Confidence 3466666789999999999999999999999999988886531 100 0 000 0000011111
Q ss_pred CEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEecCCCCcccccccCCCchhhHHHHhhhcccceeeecC
Q 005402 118 GKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYP 197 (698)
Q Consensus 118 G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~ 197 (698)
+ ....+++|...++. ++++.++...+.+ +......+...|.
T Consensus 66 ~---------------------------------~~~~~~~~~~~~~g--v~~~~l~~~~~~~----~~~~~~~~~~~~~ 106 (476)
T cd03791 66 G---------------------------------RPEYVGVFELPVDG--VPVYFLDNPDYFD----RPGLYDDSGYDYE 106 (476)
T ss_pred C---------------------------------ceeEEEEEEEEeCC--ceEEEEcChHHcC----CCCCCCccCCCCc
Confidence 1 12333444333221 2333333222111 0000112233343
Q ss_pred CCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCcccccC-CccceEecCCCcccchHHHHHHHHHHhcCCCHHHHH
Q 005402 198 GDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF-PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAW 276 (698)
Q Consensus 198 ~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~l-~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~ 276 (698)
. +..+..+|+.|+++ .++.+ .++.+||+||.|++++...+-+...+ .
T Consensus 107 ~---------~~~~~~~f~~~~~~--------------~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~---------~ 154 (476)
T cd03791 107 D---------NAERFALFSRAALE--------------LLRRLGWKPDIIHCHDWHTGLVPALLKEKYAD---------P 154 (476)
T ss_pred c---------HHHHHHHHHHHHHH--------------HHHhcCCCCcEEEECchHHHHHHHHHHHhhcc---------c
Confidence 2 44555788877653 22222 35669999999999888765543321 0
Q ss_pred HHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhHHHHHHHHhhhCCCChhhHHHHHhcceEEecccccccc
Q 005402 277 NITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF 356 (698)
Q Consensus 277 ~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v 356 (698)
...+..++||.|++.+.| .||...+........ ..+. +........+++....+.....+.- +|+..-
T Consensus 155 ~~~~~~~v~tiH~~~~~g--~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~~ad~v~~-vS~~~~ 222 (476)
T cd03791 155 FFKNIKTVFTIHNLAYQG--VFPLEALEDLGLPWE-------ELFH--IDGLEFYGQVNFLKAGIVYADAVTT-VSPTYA 222 (476)
T ss_pred cCCCCCEEEEeCCCCCCC--CCCHHHHHHcCCCcc-------chhh--hcccccCCcccHHHHHHHhcCcCee-cCHhHH
Confidence 134567999999998888 467666654421100 0000 0000011112222222211111111 111110
Q ss_pred eeecc----ccccCCCCCCCcccccccccCCCc--h--hh--h-hhhhhcCCCHHHHHHHHHHHHHHhCCCCCCCCceee
Q 005402 357 ADLFV----KTKESTDVVPDDELENCDEEGGPV--D--EE--L-ESAQEDGVLEEESTDVVSFIKEKTGYSVSPDAMFDI 425 (698)
Q Consensus 357 a~l~~----~~~~~~~~~~~~~i~~~t~g~h~~--~--~~--l-~k~~tngi~~~~K~~l~~~l~~~~g~~~~~~~~~~~ 425 (698)
..+.- .+..+.......++..+.||++.. . .. + ..+ +......|..+++.+++++|++.+++.++++
T Consensus 223 ~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~--~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~ 300 (476)
T cd03791 223 REILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANY--SADDLEGKAENKAALQEELGLPVDPDAPLFG 300 (476)
T ss_pred HHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcC--CccccccHHHHHHHHHHHcCCCcCCCCCEEE
Confidence 00000 000000011123556667777652 0 00 1 111 0112257888899999999998889999999
Q ss_pred eccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcce
Q 005402 426 QVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLK 505 (698)
Q Consensus 426 ~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~lk 505 (698)
+++|+.++||.++ +++++.++.+. +++|++.|++++.+... +.++++. ..+ +
T Consensus 301 ~vGrl~~~Kg~~~-li~a~~~l~~~-------------~~~lvi~G~g~~~~~~~------~~~~~~~------~~~--~ 352 (476)
T cd03791 301 FVGRLTEQKGIDL-LLEALPELLEL-------------GGQLVILGSGDPEYEEA------LRELAAR------YPG--R 352 (476)
T ss_pred EEeeccccccHHH-HHHHHHHHHHc-------------CcEEEEEecCCHHHHHH------HHHHHHh------CCC--c
Confidence 9999999999999 99988876532 58999999997655433 6666653 134 7
Q ss_pred EEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhhhh
Q 005402 506 VIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGL 585 (698)
Q Consensus 506 vvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~~ 585 (698)
|.|+.+|+.++++.++++||++++||+ +||||+++|.||.+|+++|+|..| +..|+|.+.
T Consensus 353 v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~~~~g------------------g~~e~v~~~ 412 (476)
T cd03791 353 VAVLIGYDEALAHLIYAGADFFLMPSR--FEPCGLTQMYAMRYGTVPIVRATG------------------GLADTVIDY 412 (476)
T ss_pred EEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCcHHHHHHhhCCCCCEECcCC------------------CccceEeCC
Confidence 999999999999999999999999999 999999999999999999977666 344555432
Q ss_pred hhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhcCHHHHHH
Q 005402 586 RKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTR 664 (698)
Q Consensus 586 ~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~d~~~W~~ 664 (698)
... + ..++|+ |.+.+.++|.++|. ++...|.+++.|.+
T Consensus 413 ~~~---------~-------~~~~G~~~~~~~~~~l~~~i~-------------------------~~l~~~~~~~~~~~ 451 (476)
T cd03791 413 NED---------T-------GEGTGFVFEGYNADALLAALR-------------------------RALALYRDPEAWRK 451 (476)
T ss_pred cCC---------C-------CCCCeEEeCCCCHHHHHHHHH-------------------------HHHHHHcCHHHHHH
Confidence 110 0 135777 77777888888886 88889999999999
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHH
Q 005402 665 MSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 665 ~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
+++++++ ..|||++++++|.+..
T Consensus 452 ~~~~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 452 LQRNAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHHHHhc--cCCChHHHHHHHHHHH
Confidence 9999997 4899999999998754
No 12
>PRK14098 glycogen synthase; Provisional
Probab=99.96 E-value=9.5e-28 Score=270.30 Aligned_cols=329 Identities=15% Similarity=0.210 Sum_probs=223.6
Q ss_pred ccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhHHH
Q 005402 242 EKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEEL 321 (698)
Q Consensus 242 ~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~~~ 321 (698)
++.+||.||-|++++.+ +++...... .. ..+-.+|||.|+....| .||.+.+..++|....
T Consensus 141 ~pDiiH~hdw~t~l~~~-~l~~~~~~~-----~~--~~~~~~V~TiHn~~~qg--~~~~~~~~~~~~~~~~--------- 201 (489)
T PRK14098 141 KPDIIHCHDWYAGLVPL-LLKTVYADH-----EF--FKDIKTVLTIHNVYRQG--VLPFKVFQKLLPEEVC--------- 201 (489)
T ss_pred CCCEEEecCcHHHHHHH-HHHHHhhhc-----cc--cCCCCEEEEcCCCcccC--CCCHHHHHHhCCHHhh---------
Confidence 45699999999999987 555433211 00 11346899999987766 4788877776664211
Q ss_pred HHHHHhhhCCCChhhHHHHHhcceEEecccccccceeeccccccCCCCC------CCcccccccccCCCc----hhh--h
Q 005402 322 VHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVV------PDDELENCDEEGGPV----DEE--L 389 (698)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~va~l~~~~~~~~~~~------~~~~i~~~t~g~h~~----~~~--l 389 (698)
..+. .+. ..+|+....+..-..+.- +|+..-..+.-.+ ....+. ...++..|.||+..- ... +
T Consensus 202 -~~~~-~~~-~~~n~lk~~i~~ad~Vit-VS~~~a~ei~~~~-~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~ 276 (489)
T PRK14098 202 -SGLH-REG-DEVNMLYTGVEHADLLTT-TSPRYAEEIAGDG-EEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLI 276 (489)
T ss_pred -hhhh-hcC-CcccHHHHHHHhcCccee-eCHHHHHHhCcCC-CCCcChHHHHHhcCCCeeEEeCCccccccCCcccccc
Confidence 1110 111 112222222222111111 1111111110000 000000 133555666777551 000 1
Q ss_pred -hhhhhcCCCHHHHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEE
Q 005402 390 -ESAQEDGVLEEESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCI 468 (698)
Q Consensus 390 -~k~~tngi~~~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~I 468 (698)
.+|... +.+.|..+++.+++++|++.+++.+++++++|++++|+.++ +++++.++.+. ++||+
T Consensus 277 ~~~~~~~--~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~-li~a~~~l~~~-------------~~~lv 340 (489)
T PRK14098 277 KKRYSIE--RLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAEL-LAESLEKLVEL-------------DIQLV 340 (489)
T ss_pred cccCCcc--hhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHH-HHHHHHHHHhc-------------CcEEE
Confidence 111100 12689999999999999999999999999999999999999 99998876431 68999
Q ss_pred EEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhc
Q 005402 469 FGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMN 548 (698)
Q Consensus 469 f~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~N 548 (698)
++|+|.+.++.. +.++++. +++ +|.|...|+.++++.++++||++++||+ +|+||+++|.||++
T Consensus 341 ivG~G~~~~~~~------l~~l~~~------~~~--~V~~~g~~~~~~~~~~~a~aDi~l~PS~--~E~~Gl~~lEAma~ 404 (489)
T PRK14098 341 ICGSGDKEYEKR------FQDFAEE------HPE--QVSVQTEFTDAFFHLAIAGLDMLLMPGK--IESCGMLQMFAMSY 404 (489)
T ss_pred EEeCCCHHHHHH------HHHHHHH------CCC--CEEEEEecCHHHHHHHHHhCCEEEeCCC--CCCchHHHHHHHhC
Confidence 999987665554 7777763 235 8999999999999999999999999999 99999999999999
Q ss_pred CceeeeeccccchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccC
Q 005402 549 GCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGN 627 (698)
Q Consensus 549 G~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~ 627 (698)
|+++|+|..| ++.|+|.++..+ -++|+ |.+.|.++|.++|.
T Consensus 405 G~ppVv~~~G------------------Gl~d~v~~~~~~------------------~~~G~l~~~~d~~~la~ai~-- 446 (489)
T PRK14098 405 GTIPVAYAGG------------------GIVETIEEVSED------------------KGSGFIFHDYTPEALVAKLG-- 446 (489)
T ss_pred CCCeEEecCC------------------CCceeeecCCCC------------------CCceeEeCCCCHHHHHHHHH--
Confidence 9999977665 456666543211 25787 77777888888886
Q ss_pred CCCCCCccccccCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 628 EGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 628 ~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
++...|.|++.|.+++.++|+ .+|||++++++|.+..
T Consensus 447 -----------------------~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 447 -----------------------EALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLY 483 (489)
T ss_pred -----------------------HHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHH
Confidence 898999999999999999986 5999999999996543
No 13
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.96 E-value=1.4e-27 Score=266.30 Aligned_cols=449 Identities=14% Similarity=0.167 Sum_probs=276.2
Q ss_pred ccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeecccccccCCCCcccccCCceEEeeeC
Q 005402 38 SQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFY 117 (698)
Q Consensus 38 ~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~ 117 (698)
..|.-+..-.||||.-.++.-++++.+|..+.-+.-+|+... +.++ . . + ++.
T Consensus 7 s~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~------~~~~--------~---~--~-------~~~-- 58 (473)
T TIGR02095 7 AAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIE------DEVD--------D---Q--V-------KVV-- 58 (473)
T ss_pred EeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChh------hhhc--------c---C--e-------EEE--
Confidence 345555577999999999999999999999999998887632 1000 0 0 0 000
Q ss_pred CEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEEecCCCCcccccccCCCchhhHHHHhhhcccceeeecC
Q 005402 118 GKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYP 197 (698)
Q Consensus 118 G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~ 197 (698)
....+++.| ...++++|...++. ++++.++...+.+ |. ..||+
T Consensus 59 ---------------------~~~~~~~~~----~~~~~~~~~~~~~~--v~~~~i~~~~~~~--------r~--~~~y~ 101 (473)
T TIGR02095 59 ---------------------ELVDLSVGP----RTLYVKVFEGVVEG--VPVYFIDNPSLFD--------RP--GGIYG 101 (473)
T ss_pred ---------------------EEEEEeecC----ceeEEEEEEEEECC--ceEEEEECHHHcC--------CC--CCCCC
Confidence 001111111 13445555554332 3444443322111 11 24888
Q ss_pred CCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCcccccC-CccceEecCCCcccchHHHHHHHHHHhcCCCHHHHH
Q 005402 198 GDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF-PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAW 276 (698)
Q Consensus 198 ~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~l-~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~ 276 (698)
+|. .-.+.+-.+|+.|+++ +++ .+ .++.+||+||.|++++..-+ +... +..
T Consensus 102 ~~~-----~d~~~r~~~f~~a~~~-~~~-------------~~~~~~DiiH~hdw~~~~~~~~l-~~~~---~~~----- 153 (473)
T TIGR02095 102 DDY-----PDNAERFAFFSRAAAE-LLS-------------GLGWQPDVVHAHDWHTALVPALL-KAVY---RPN----- 153 (473)
T ss_pred CCC-----CCHHHHHHHHHHHHHH-HHH-------------hcCCCCCEEEECCcHHHHHHHHH-Hhhc---cCC-----
Confidence 522 1134445788887653 221 12 24569999999999887643 3221 110
Q ss_pred HHhccceEEccccccccccccCCHHHHHHH-chHHHHHHHHhhHHHHHHHHhhhCCCChhhHHHHHhcceEEeccccccc
Q 005402 277 NITQRTVAYTNHTVLPEALEKWSFELMQKL-LPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPAT 355 (698)
Q Consensus 277 ~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~-lp~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~ 355 (698)
+..++||.|++...| .||.+.+..+ +|. .+.....-.+. +.+++....+.....+.- +|+.+
T Consensus 154 ---~~~~v~TiH~~~~~g--~~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~k~~~~~ad~v~t-VS~~~ 216 (473)
T TIGR02095 154 ---PIKTVFTIHNLAYQG--VFPADDFSELGLPP----------EYFHMEGLEFY-GRVNFLKGGIVYADRVTT-VSPTY 216 (473)
T ss_pred ---CCCEEEEcCCCccCC--cCCHHHHHHcCCCh----------HHcCchhhhcC-CchHHHHHHHHhCCcCee-cCHhH
Confidence 356899999998766 5777666542 111 00000000001 012222222211111111 11111
Q ss_pred ceeecc-ccc---cCCCCCCCcccccccccCCCc--h---hh-h-hhhhhcCCCHHHHHHHHHHHHHHhCCCCCCCCcee
Q 005402 356 FADLFV-KTK---ESTDVVPDDELENCDEEGGPV--D---EE-L-ESAQEDGVLEEESTDVVSFIKEKTGYSVSPDAMFD 424 (698)
Q Consensus 356 va~l~~-~~~---~~~~~~~~~~i~~~t~g~h~~--~---~~-l-~k~~tngi~~~~K~~l~~~l~~~~g~~~~~~~~~~ 424 (698)
...+.- ... .........++..+.||++.. . +. + .+|. -...++|..+++.+++++|++.+++.+++
T Consensus 217 ~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~--~~~~~~k~~~k~~l~~~~gl~~~~~~~~i 294 (473)
T TIGR02095 217 AREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYS--ADDLAGKAENKEALQEELGLPVDDDVPLF 294 (473)
T ss_pred HHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcC--ccchhhhhhhHHHHHHHcCCCccCCCCEE
Confidence 100000 000 000001123556667777652 0 00 1 1111 01226788889999999999877899999
Q ss_pred eeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcc
Q 005402 425 IQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL 504 (698)
Q Consensus 425 ~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~l 504 (698)
+++.|+.++||.++ ++.++.++.+. +++++|+|+++|.++.. +.++++. . ++
T Consensus 295 ~~vGrl~~~Kg~~~-li~a~~~l~~~-------------~~~lvi~G~g~~~~~~~------l~~~~~~---~---~~-- 346 (473)
T TIGR02095 295 GVISRLTQQKGVDL-LLAALPELLEL-------------GGQLVVLGTGDPELEEA------LRELAER---Y---PG-- 346 (473)
T ss_pred EEEecCccccChHH-HHHHHHHHHHc-------------CcEEEEECCCCHHHHHH------HHHHHHH---C---CC--
Confidence 99999999999999 99998886431 58999999998765544 6666652 2 34
Q ss_pred eEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhhh
Q 005402 505 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAG 584 (698)
Q Consensus 505 kvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~ 584 (698)
+|.|..+|+.+.++.++++||++++||+ +|+||+++|.||.+|+++|+|..| +..|+|.+
T Consensus 347 ~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~s~~g------------------g~~e~v~~ 406 (473)
T TIGR02095 347 NVRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQLYAMRYGTVPIVRRTG------------------GLADTVVD 406 (473)
T ss_pred cEEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHHHHHHHCCCCeEEccCC------------------CccceEec
Confidence 7999999999999999999999999999 999999999999999999977666 34455543
Q ss_pred hhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc-CHHHH
Q 005402 585 LRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC-DQKRW 662 (698)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~-d~~~W 662 (698)
.+.. ....+|+ |.+.|.++|.++|. ++...|. |++.|
T Consensus 407 ~~~~----------------~~~~~G~l~~~~d~~~la~~i~-------------------------~~l~~~~~~~~~~ 445 (473)
T TIGR02095 407 GDPE----------------AESGTGFLFEEYDPGALLAALS-------------------------RALRLYRQDPSLW 445 (473)
T ss_pred CCCC----------------CCCCceEEeCCCCHHHHHHHHH-------------------------HHHHHHhcCHHHH
Confidence 2110 0125677 77777888888876 8888776 99999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 663 TRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 663 ~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
.+|..++|+ .+|||++++++|.+..
T Consensus 446 ~~~~~~~~~--~~fsw~~~a~~~~~~Y 470 (473)
T TIGR02095 446 EALQKNAMS--QDFSWDKSAKQYVELY 470 (473)
T ss_pred HHHHHHHhc--cCCCcHHHHHHHHHHH
Confidence 999999986 5999999999997653
No 14
>PLN02939 transferase, transferring glycosyl groups
Probab=99.95 E-value=6.8e-26 Score=266.23 Aligned_cols=204 Identities=14% Similarity=0.221 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHHhCCCCC-CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecC-CccC
Q 005402 400 EESTDVVSFIKEKTGYSVS-PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA-FATY 477 (698)
Q Consensus 400 ~~K~~l~~~l~~~~g~~~~-~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka-~p~~ 477 (698)
++|..++..+++++|++.+ ++.+++++|+|++++||.++ ++.++.++... ++|||++|.| .|.+
T Consensus 757 ~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDl-LleA~~~Ll~~-------------dvqLVIvGdGp~~~~ 822 (977)
T PLN02939 757 QGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHL-IRHAIYKTAEL-------------GGQFVLLGSSPVPHI 822 (977)
T ss_pred hhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHH-HHHHHHHHhhc-------------CCEEEEEeCCCcHHH
Confidence 7999999999999998754 78899999999999999999 99988776431 5799999998 4555
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecc
Q 005402 478 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD 557 (698)
Q Consensus 478 ~~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~D 557 (698)
+.. +.++++... ..+ +|.|+..|+..+++.+++|||++++||+ +||||+++|.||.+|++||+|..
T Consensus 823 e~e------L~~La~~l~----l~d--rV~FlG~~de~lah~IYAaADIFLmPSr--~EPfGLvqLEAMAyGtPPVVs~v 888 (977)
T PLN02939 823 QRE------FEGIADQFQ----SNN--NIRLILKYDEALSHSIYAASDMFIIPSM--FEPCGLTQMIAMRYGSVPIVRKT 888 (977)
T ss_pred HHH------HHHHHHHcC----CCC--eEEEEeccCHHHHHHHHHhCCEEEECCC--ccCCcHHHHHHHHCCCCEEEecC
Confidence 444 667776432 245 8999999999999999999999999999 99999999999999999996654
Q ss_pred ccchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccc
Q 005402 558 GANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYF 636 (698)
Q Consensus 558 Gw~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y 636 (698)
| |+.|+|.+.+... +.....+|+ |.+.|.++|.++|.
T Consensus 889 G------------------GL~DtV~d~d~e~-------------i~~eg~NGfLf~~~D~eaLa~AL~----------- 926 (977)
T PLN02939 889 G------------------GLNDSVFDFDDET-------------IPVELRNGFTFLTPDEQGLNSALE----------- 926 (977)
T ss_pred C------------------CCcceeecCCccc-------------cccCCCceEEecCCCHHHHHHHHH-----------
Confidence 4 5778887543210 001136788 88888888888886
Q ss_pred cccCChhHHHHHHHHHHHHh-cCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 637 LVGKDFPSYLECQEKVDEAY-CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 637 ~v~~Df~sy~~aq~~a~~~Y-~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
++...| .|++.|.+|+.++|+ .+|||++++++|.+..
T Consensus 927 --------------rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY 964 (977)
T PLN02939 927 --------------RAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELY 964 (977)
T ss_pred --------------HHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHH
Confidence 888766 679999999999997 5999999999997643
No 15
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.94 E-value=2.6e-25 Score=248.40 Aligned_cols=198 Identities=20% Similarity=0.246 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHH
Q 005402 400 EESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ 479 (698)
Q Consensus 400 ~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~ 479 (698)
++|..+++.+++++|++ +++.++++++.|++++||.++ +++++.++.+. +++++++|.+++.+..
T Consensus 262 ~~k~~~k~~l~~~~gl~-~~~~~~i~~vGRl~~~KG~~~-li~a~~~l~~~-------------~~~lvivG~g~~~~~~ 326 (466)
T PRK00654 262 EGKAENKRALQERFGLP-DDDAPLFAMVSRLTEQKGLDL-VLEALPELLEQ-------------GGQLVLLGTGDPELEE 326 (466)
T ss_pred hchHHHHHHHHHHhCCC-CCCCcEEEEeeccccccChHH-HHHHHHHHHhc-------------CCEEEEEecCcHHHHH
Confidence 57888889999999987 557899999999999999999 99988876431 6799999999876554
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecccc
Q 005402 480 AKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA 559 (698)
Q Consensus 480 ~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw 559 (698)
. +.++++. +++ +|.+..+|+.++++.++++||++++||+ +|+||+++|.||.+|+++|+|..|
T Consensus 327 ~------l~~l~~~------~~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~lEAma~G~p~V~~~~g- 389 (466)
T PRK00654 327 A------FRALAAR------YPG--KVGVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQLYALRYGTLPIVRRTG- 389 (466)
T ss_pred H------HHHHHHH------CCC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHHHHHHCCCCEEEeCCC-
Confidence 4 6666653 234 7888899999999999999999999999 999999999999999999977555
Q ss_pred chhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccc
Q 005402 560 NVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLV 638 (698)
Q Consensus 560 ~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v 638 (698)
+..|+|.+.+.. ....+|+ |.+.|.++|.++|.
T Consensus 390 -----------------G~~e~v~~~~~~----------------~~~~~G~lv~~~d~~~la~~i~------------- 423 (466)
T PRK00654 390 -----------------GLADTVIDYNPE----------------DGEATGFVFDDFNAEDLLRALR------------- 423 (466)
T ss_pred -----------------CccceeecCCCC----------------CCCCceEEeCCCCHHHHHHHHH-------------
Confidence 455666432110 0126787 77778888888886
Q ss_pred cCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 639 GKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 639 ~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
++...|.+++.|.++..++|+ .+|||++++++|.+..
T Consensus 424 ------------~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY 460 (466)
T PRK00654 424 ------------RALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELY 460 (466)
T ss_pred ------------HHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHH
Confidence 888888899999999999986 5999999999997654
No 16
>PLN02316 synthase/transferase
Probab=99.94 E-value=4.7e-25 Score=262.73 Aligned_cols=211 Identities=13% Similarity=0.191 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecC-CccCH
Q 005402 400 EESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA-FATYV 478 (698)
Q Consensus 400 ~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka-~p~~~ 478 (698)
++|..+++.+++++|++ +++.|++++|+||+++||.++ |++.+.++++. ++|||++|.| .+.++
T Consensus 820 ~gK~~~k~~Lr~~lGL~-~~d~plVg~VGRL~~qKGvdl-Li~Al~~ll~~-------------~~qlVIvG~Gpd~~~e 884 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLK-QADLPLVGIITRLTHQKGIHL-IKHAIWRTLER-------------NGQVVLLGSAPDPRIQ 884 (1036)
T ss_pred hhhhhhHHHHHHHhCCC-cccCeEEEEEeccccccCHHH-HHHHHHHHhhc-------------CcEEEEEeCCCCHHHH
Confidence 67899999999999987 467899999999999999999 99998887531 6899999998 44444
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc
Q 005402 479 QAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 558 (698)
Q Consensus 479 ~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG 558 (698)
.. +.++++.+.. .+++ +|.|...|+..++|++++|||++++||+ +||||+++|.||.+|++||+|..|
T Consensus 885 ~~------l~~La~~Lg~--~~~~--rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~GtppVvs~vG 952 (1036)
T PLN02316 885 ND------FVNLANQLHS--SHHD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRYGSIPVVRKTG 952 (1036)
T ss_pred HH------HHHHHHHhCc--cCCC--eEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHcCCCeEEEcCC
Confidence 33 6666654321 1356 8999999999999999999999999999 999999999999999999965544
Q ss_pred cchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCcccc
Q 005402 559 ANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFL 637 (698)
Q Consensus 559 w~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~ 637 (698)
|+.|+|.+.+.... .. +......+|+ |.+.++++|..+|.
T Consensus 953 ------------------GL~DtV~d~d~~~~------~~---~~~g~~~tGflf~~~d~~aLa~AL~------------ 993 (1036)
T PLN02316 953 ------------------GLFDTVFDVDHDKE------RA---QAQGLEPNGFSFDGADAAGVDYALN------------ 993 (1036)
T ss_pred ------------------CcHhhccccccccc------cc---cccccCCceEEeCCCCHHHHHHHHH------------
Confidence 68899987543200 00 0000136898 98888999988887
Q ss_pred ccCChhHHHHHHHHHHHHhcC-HHHHHHHHHHHhccCCCCChHHHHHHHHHHHhc
Q 005402 638 VGKDFPSYLECQEKVDEAYCD-QKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 638 v~~Df~sy~~aq~~a~~~Y~d-~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~ 691 (698)
++...|.+ +..|.++++++|+ .+|||++++++|.+....
T Consensus 994 -------------raL~~~~~~~~~~~~~~r~~m~--~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 994 -------------RAISAWYDGRDWFNSLCKRVME--QDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred -------------HHHhhhhhhHHHHHHHHHHHHH--hhCCHHHHHHHHHHHHHH
Confidence 88888755 5556899999997 599999999999865443
No 17
>PRK14099 glycogen synthase; Provisional
Probab=99.93 E-value=4.6e-25 Score=248.38 Aligned_cols=205 Identities=17% Similarity=0.181 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHH
Q 005402 400 EESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ 479 (698)
Q Consensus 400 ~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~ 479 (698)
+.|..+++.+++++|++.+++.+++++|+|++++|+.++ +++++.++.+. ++++|++|.|.+.++.
T Consensus 274 ~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~-Li~A~~~l~~~-------------~~~lvivG~G~~~~~~ 339 (485)
T PRK14099 274 AARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDL-LLEALPTLLGE-------------GAQLALLGSGDAELEA 339 (485)
T ss_pred HhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHH-HHHHHHHHHhc-------------CcEEEEEecCCHHHHH
Confidence 678889999999999988889999999999999999999 99988876431 5799999999765554
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecccc
Q 005402 480 AKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA 559 (698)
Q Consensus 480 ~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw 559 (698)
. +.++++. . ++ +++++.+|+.+++++++++||++++||+ +|+||+++|.||.+|++||.|..|
T Consensus 340 ~------l~~l~~~---~---~~--~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E~fGl~~lEAma~G~ppVvs~~G- 402 (485)
T PRK14099 340 R------FRAAAQA---Y---PG--QIGVVIGYDEALAHLIQAGADALLVPSR--FEPCGLTQLCALRYGAVPVVARVG- 402 (485)
T ss_pred H------HHHHHHH---C---CC--CEEEEeCCCHHHHHHHHhcCCEEEECCc--cCCCcHHHHHHHHCCCCcEEeCCC-
Confidence 4 6666653 2 35 7878889999999999999999999999 999999999999999999965444
Q ss_pred chhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccc
Q 005402 560 NVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLV 638 (698)
Q Consensus 560 ~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v 638 (698)
++.|+|.+.+.. ++ . ....+|+ |.+.|.++|.++|.
T Consensus 403 -----------------Gl~d~V~~~~~~---------~~---~-~~~~~G~l~~~~d~~~La~ai~------------- 439 (485)
T PRK14099 403 -----------------GLADTVVDANEM---------AI---A-TGVATGVQFSPVTADALAAALR------------- 439 (485)
T ss_pred -----------------Cccceeeccccc---------cc---c-cCCCceEEeCCCCHHHHHHHHH-------------
Confidence 577777643211 00 0 0125788 88888888888886
Q ss_pred cCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005402 639 GKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 639 ~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~ 692 (698)
++..+|.|++.|.++..++|+ .+|||++++++|.+..-.+
T Consensus 440 ------------~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 440 ------------KTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred ------------HHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHH
Confidence 888899999999999999996 6999999999997654443
No 18
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.46 E-value=7.6e-13 Score=155.80 Aligned_cols=197 Identities=12% Similarity=0.089 Sum_probs=146.5
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCC----ccCHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAF----ATYVQAKRI 483 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~----p~~~~~K~i 483 (698)
..++.+|+..+|+.+++.++.|+.+.|+.+. ++..+.++.++. ..+++|+.|.+. ..+...++.
T Consensus 537 ~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~-LIeA~~~l~~l~-----------~~~~LVIVGGg~~~~~s~d~ee~~~ 604 (784)
T TIGR02470 537 DNDEHYGYLKDPNKPIIFSMARLDRVKNLTG-LVECYGRSPKLR-----------ELVNLVVVAGKLDAKESKDREEQAE 604 (784)
T ss_pred hHHHHhCCCCCCCCcEEEEEeCCCccCCHHH-HHHHHHHhHhhC-----------CCeEEEEEeCCcccccccchhHHHH
Confidence 3457788877899999999999999999999 888877654432 146777766543 134455567
Q ss_pred HHHHHHHhhhhcCCCCCCCcceEEEEcC-----CCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc
Q 005402 484 VKFITDVGATVNHDPEIGDLLKVIFVPD-----YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 558 (698)
Q Consensus 484 Ik~i~~~a~~in~dp~~~~~lkvvf~~n-----Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG 558 (698)
++.+.++++..+ +.+ +|.|+-- ..-++.+.+..++|++++||+ +||+|++.+-||..|++.|+|..|
T Consensus 605 i~~L~~la~~~g----L~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~G 676 (784)
T TIGR02470 605 IEKMHNLIDQYQ----LHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFG 676 (784)
T ss_pred HHHHHHHHHHhC----CCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCC
Confidence 777777777432 567 7777531 112344445557899999999 999999999999999999988777
Q ss_pred cchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCcccc
Q 005402 559 ANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFL 637 (698)
Q Consensus 559 w~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~ 637 (698)
|..|.|.+ -.+|+ +++.|.+++.++|.
T Consensus 677 ------------------G~~EiV~d----------------------g~tGfLVdp~D~eaLA~aL~------------ 704 (784)
T TIGR02470 677 ------------------GPLEIIQD----------------------GVSGFHIDPYHGEEAAEKIV------------ 704 (784)
T ss_pred ------------------CHHHHhcC----------------------CCcEEEeCCCCHHHHHHHHH------------
Confidence 44454431 24676 66777888888886
Q ss_pred ccCChhHHHHHHHHHH-HHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHH
Q 005402 638 VGKDFPSYLECQEKVD-EAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDI 689 (698)
Q Consensus 638 v~~Df~sy~~aq~~a~-~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~i 689 (698)
++. ....|++.|.+++.+++... ..|||++++++|.+.+
T Consensus 705 -------------~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 705 -------------DFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred -------------HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 554 35689999999999998764 6999999999998754
No 19
>PLN00142 sucrose synthase
Probab=99.34 E-value=1.4e-11 Score=145.36 Aligned_cols=196 Identities=13% Similarity=0.085 Sum_probs=144.5
Q ss_pred HHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecC-Ccc---CHHHHHHH
Q 005402 409 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA-FAT---YVQAKRIV 484 (698)
Q Consensus 409 l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka-~p~---~~~~K~iI 484 (698)
.++.+|...+++.++++++.|+.++|+.+. ++..+.++.++. .++++++.|.+ +|. +...++.+
T Consensus 561 ~~e~lg~l~~~~kpvIl~VGRL~~~KGid~-LIeA~a~l~~l~-----------~~~~LVIVGgg~d~~~s~d~ee~~el 628 (815)
T PLN00142 561 NDEHIGYLKDRKKPIIFSMARLDRVKNLTG-LVEWYGKNKRLR-----------ELVNLVVVGGFIDPSKSKDREEIAEI 628 (815)
T ss_pred HHHHhCCccCCCCcEEEEEecCcccCCHHH-HHHHHHHHHHhC-----------CCcEEEEEECCccccccccHHHHHHH
Confidence 345678766788999999999999999999 999887764431 14788887766 442 33344455
Q ss_pred HHHHHHhhhhcCCCCCCCcceEEEEcC---C--CHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecccc
Q 005402 485 KFITDVGATVNHDPEIGDLLKVIFVPD---Y--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA 559 (698)
Q Consensus 485 k~i~~~a~~in~dp~~~~~lkvvf~~n---Y--~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw 559 (698)
+.+.++++..+ +.+ +|.|+.. + +.++.+.+..++|++++||+ +|++|++-+-||..|++.|+|..|-
T Consensus 629 ~~L~~La~~lg----L~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG 700 (815)
T PLN00142 629 KKMHSLIEKYN----LKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGG 700 (815)
T ss_pred HHHHHHHHHcC----CCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCC
Confidence 66666666422 567 7877642 2 24566666668999999999 9999999999999999999887763
Q ss_pred chhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccc
Q 005402 560 NVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLV 638 (698)
Q Consensus 560 ~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v 638 (698)
..|.|.+ -.+|+ +.+.|.+++.++|.
T Consensus 701 ------------------~~EIV~d----------------------G~tG~LV~P~D~eaLA~aI~------------- 727 (815)
T PLN00142 701 ------------------PAEIIVD----------------------GVSGFHIDPYHGDEAANKIA------------- 727 (815)
T ss_pred ------------------HHHHhcC----------------------CCcEEEeCCCCHHHHHHHHH-------------
Confidence 3333321 14566 55667777777775
Q ss_pred cCChhHHHHHHHHHH-HHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHH
Q 005402 639 GKDFPSYLECQEKVD-EAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDI 689 (698)
Q Consensus 639 ~~Df~sy~~aq~~a~-~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~i 689 (698)
++. .++.|++.|.+|..++.... ..|||++++++|.+.+
T Consensus 728 ------------~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 728 ------------DFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred ------------HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 443 46789999999999998764 6899999999998765
No 20
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.14 E-value=1.3e-09 Score=117.61 Aligned_cols=190 Identities=16% Similarity=0.120 Sum_probs=130.8
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
.+++++|. +++.++++++.||+.+|+.++ ++.++.++.+. ..+++++++|.+.+.....+.+.+.+
T Consensus 179 ~~~~~~~~--~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~-----------~~~~~l~i~G~g~~~~~~~~~~~~~~ 244 (372)
T cd03792 179 YILEKYGI--DPERPYITQVSRFDPWKDPFG-VIDAYRKVKER-----------VPDPQLVLVGSGATDDPEGWIVYEEV 244 (372)
T ss_pred HHHHHhCC--CCCCcEEEEEeccccccCcHH-HHHHHHHHHhh-----------CCCCEEEEEeCCCCCCchhHHHHHHH
Confidence 45566774 577899999999999999999 99988876542 12579999999976554444444444
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCC--CHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhh
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDY--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQ 565 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY--~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~ 565 (698)
.+... ..+ +|.|+... +-+....++++||++++||+ .|..|++-+-||..|++.|+|..|.-.|++.
T Consensus 245 ~~~~~-------~~~--~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 245 LEYAE-------GDP--DIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIE 313 (372)
T ss_pred HHHhC-------CCC--CeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCchhhcc
Confidence 43222 234 67777654 55666788999999999999 9999999999999999999775553222221
Q ss_pred hccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHH
Q 005402 566 EVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSY 645 (698)
Q Consensus 566 ~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy 645 (698)
. +.+|+++ .+ .+++..
T Consensus 314 ~--~~~g~~~-------------------------------------~~--~~~~a~----------------------- 329 (372)
T cd03792 314 D--GETGFLV-------------------------------------DT--VEEAAV----------------------- 329 (372)
T ss_pred c--CCceEEe-------------------------------------CC--cHHHHH-----------------------
Confidence 1 1122211 11 111111
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhcc-CCCCChHHHHHHHHHHHhc
Q 005402 646 LECQEKVDEAYCDQKRWTRMSIMNTAG-SSKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 646 ~~aq~~a~~~Y~d~~~W~~~~~~~ma~-~~~FS~drsi~eY~~~iw~ 691 (698)
.+..+..|++.+.+|..++-.. ...|||++++++|.+.+..
T Consensus 330 -----~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 330 -----RILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred -----HHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 3334556788888887777553 2589999999999987764
No 21
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.13 E-value=1.5e-09 Score=116.47 Aligned_cols=192 Identities=16% Similarity=0.143 Sum_probs=131.7
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
.+++++|+ +++.+.++++.|+..+|+.++ ++..+.++.. +.++++.|.+....+....+.+.+
T Consensus 190 ~~~~~~~~--~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l~~--------------~~~l~i~g~g~~~~~~~~~~~~~~ 252 (388)
T TIGR02149 190 VVLDRYGI--DRSRPYILFVGRITRQKGVPH-LLDAVHYIPK--------------DVQVVLCAGAPDTPEVAEEVRQAV 252 (388)
T ss_pred HHHHHhCC--CCCceEEEEEcccccccCHHH-HHHHHHHHhh--------------cCcEEEEeCCCCcHHHHHHHHHHH
Confidence 35667775 467889999999999999999 9888776521 457777766544433333344444
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcC-CCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhh
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 566 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~ 566 (698)
..+.. . .+ +|.|+.+ ++.+-...++++||+++.||+ .|+.|++.+-||..|.+.|+|..|...|+++.
T Consensus 253 ~~~~~----~---~~--~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~ 321 (388)
T TIGR02149 253 ALLDR----N---RT--GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGIVNLEAMACGTPVVASATGGIPEVVVD 321 (388)
T ss_pred HHhcc----c---cC--ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCChHHHHHHHcCCCEEEeCCCCHHHHhhC
Confidence 44332 1 12 5777765 566777888999999999999 89999999999999999999988877776543
Q ss_pred ccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHH
Q 005402 567 VGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYL 646 (698)
Q Consensus 567 ~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~ 646 (698)
+.|||++-....+. +...++|.+.|
T Consensus 322 --~~~G~~~~~~~~~~-------------------------------~~~~~~l~~~i---------------------- 346 (388)
T TIGR02149 322 --GETGFLVPPDNSDA-------------------------------DGFQAELAKAI---------------------- 346 (388)
T ss_pred --CCceEEcCCCCCcc-------------------------------cchHHHHHHHH----------------------
Confidence 24555553210000 00013333333
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHH
Q 005402 647 ECQEKVDEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARD 688 (698)
Q Consensus 647 ~aq~~a~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~ 688 (698)
..+..|++.+.++..++.... ..|||+.++++|.+.
T Consensus 347 ------~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 383 (388)
T TIGR02149 347 ------NILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTVEM 383 (388)
T ss_pred ------HHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 335578888998888887543 589999999998864
No 22
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.11 E-value=1.7e-09 Score=117.56 Aligned_cols=193 Identities=17% Similarity=0.147 Sum_probs=131.5
Q ss_pred HHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccC-HHHHHHHHHH
Q 005402 409 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIVKFI 487 (698)
Q Consensus 409 l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~-~~~K~iIk~i 487 (698)
.++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+- .+. .+++++++|.+.+.- ..-.++.+++
T Consensus 209 ~~~~~~~--~~~~~~i~~~G~l~~~K~~~~-li~a~~~l~~~---~~~------~~~~l~ivG~~~~~g~~~~~~l~~~~ 276 (405)
T TIGR03449 209 ERARLGL--PLDTKVVAFVGRIQPLKAPDV-LLRAVAELLDR---DPD------RNLRVIVVGGPSGSGLATPDALIELA 276 (405)
T ss_pred HHHhcCC--CCCCcEEEEecCCCcccCHHH-HHHHHHHHHhh---CCC------cceEEEEEeCCCCCcchHHHHHHHHH
Confidence 4556665 456789999999999999999 99988887532 111 138899999654321 2222233332
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhc
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 567 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~ 567 (698)
.++. +.+ +|.|...-.-+-...++++||++++||+ .|..|++-+-||..|.+.|+|..|...|+++..
T Consensus 277 ~~~~--------l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~ 344 (405)
T TIGR03449 277 AELG--------IAD--RVRFLPPRPPEELVHVYRAADVVAVPSY--NESFGLVAMEAQACGTPVVAARVGGLPVAVADG 344 (405)
T ss_pred HHcC--------CCc--eEEECCCCCHHHHHHHHHhCCEEEECCC--CCCcChHHHHHHHcCCCEEEecCCCcHhhhccC
Confidence 2221 334 6777665445556678999999999999 899999999999999999998888665554321
Q ss_pred cCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHH
Q 005402 568 GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLE 647 (698)
Q Consensus 568 G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~ 647 (698)
.+||+ +.+.|.+++.++|.
T Consensus 345 --~~g~~-------------------------------------~~~~d~~~la~~i~---------------------- 363 (405)
T TIGR03449 345 --ETGLL-------------------------------------VDGHDPADWADALA---------------------- 363 (405)
T ss_pred --CceEE-------------------------------------CCCCCHHHHHHHHH----------------------
Confidence 23332 33335556665554
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005402 648 CQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 648 aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~ 692 (698)
++ ..|++.+.+|..++......|||++++++|.+...++
T Consensus 364 ---~~---l~~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 364 ---RL---LDDPRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred ---HH---HhCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 33 3477777777777665445899999999999776543
No 23
>PHA01633 putative glycosyl transferase group 1
Probab=99.03 E-value=2e-09 Score=116.75 Aligned_cols=195 Identities=12% Similarity=0.073 Sum_probs=130.5
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
.++++++... |+.+.++++.|++++|++++ +++++.++.+- .+.. ...+++++.|.+ .+
T Consensus 136 ~~r~~~~~~~-~~~~~i~~vGRl~~~KG~~~-LI~A~~~L~~~---~p~~----~~~i~l~ivG~~------------~~ 194 (335)
T PHA01633 136 QLKQKLDKDF-PDTIKFGIVSGLTKRKNMDL-MLQVFNELNTK---YPDI----AKKIHFFVISHK------------QF 194 (335)
T ss_pred HHHHHhCcCC-CCCeEEEEEeCCccccCHHH-HHHHHHHHHHh---CCCc----cccEEEEEEcHH------------HH
Confidence 3455555432 46788999999999999999 99999887542 1110 013578777731 12
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCC---HHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhh
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYN---VSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 564 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~---~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~ 564 (698)
.++. +++ +|.|+-.++ -+-...++++||++++||+ .|++|+..+-||..|++.|++.-|-..|++
T Consensus 195 ~~l~--------l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~ 262 (335)
T PHA01633 195 TQLE--------VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEFT 262 (335)
T ss_pred HHcC--------CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceeec
Confidence 2211 345 688875432 3445689999999999999 899999999999999999999888777764
Q ss_pred hhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChh
Q 005402 565 QEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFP 643 (698)
Q Consensus 565 ~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~ 643 (698)
|+..+++| ..|+|.++... .-+.|+ |.++++++|.++|.
T Consensus 263 ---g~~~~~Li--~~~~v~~~~~~-----------------~~g~g~~~~~~d~~~la~ai~------------------ 302 (335)
T PHA01633 263 ---SWQWNLLI--KSSKVEEYYDK-----------------EHGQKWKIHKFQIEDMANAII------------------ 302 (335)
T ss_pred ---CCccceee--CCCCHHHhcCc-----------------ccCceeeecCCCHHHHHHHHH------------------
Confidence 43222443 24556543311 125577 77888888888886
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHH
Q 005402 644 SYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYA 686 (698)
Q Consensus 644 sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~ 686 (698)
++...+ ++.+= ..++...+..|+|++-.++|.
T Consensus 303 -------~~~~~~-~~~~~---~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 303 -------LAFELQ-DREER---SMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred -------HHHhcc-Chhhh---hHHHHHHHHhcCHHHHHHHhh
Confidence 666665 33221 223333346999999888875
No 24
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.00 E-value=6e-09 Score=107.73 Aligned_cols=127 Identities=16% Similarity=0.149 Sum_probs=95.5
Q ss_pred HHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHH
Q 005402 410 KEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD 489 (698)
Q Consensus 410 ~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~ 489 (698)
++..+ ..++.+.++++.|+.+.|+.++ ++.++.++.+. ..+++++|.|++.+.+... +..
T Consensus 194 ~~~~~--~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~-----------~~~~~l~i~G~~~~~~~~~------~~~ 253 (375)
T cd03821 194 RRKFP--ILPDKRIILFLGRLHPKKGLDL-LIEAFAKLAER-----------FPDWHLVIAGPDEGGYRAE------LKQ 253 (375)
T ss_pred hhhcc--CCCCCcEEEEEeCcchhcCHHH-HHHHHHHhhhh-----------cCCeEEEEECCCCcchHHH------HHH
Confidence 44444 3466789999999999999999 99888876542 1268999999988877655 333
Q ss_pred HhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhh
Q 005402 490 VGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 564 (698)
Q Consensus 490 ~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~ 564 (698)
+++..+ ..+ +|.|....+-+--..++..||++++||+ .|.+|++-+-||..|.+.|+|..|...|++
T Consensus 254 ~~~~~~----~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~~~~ 320 (375)
T cd03821 254 IAAALG----LED--RVTFTGMLYGEDKAAALADADLFVLPSH--SENFGIVVAEALACGTPVVTTDKVPWQELI 320 (375)
T ss_pred HHHhcC----ccc--eEEEcCCCChHHHHHHHhhCCEEEeccc--cCCCCcHHHHHHhcCCCEEEcCCCCHHHHh
Confidence 322211 334 6878776665556667888999999999 799999999999999999988777554443
No 25
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.99 E-value=5e-09 Score=116.67 Aligned_cols=186 Identities=17% Similarity=0.195 Sum_probs=122.9
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCH---HHHHHHHHHHHHhhhh
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV---QAKRIVKFITDVGATV 494 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~---~~K~iIk~i~~~a~~i 494 (698)
.++.++++++.|+.+.|++++ +++.+.++.+++. . +.-++++|.+..... ..++..+.+.++++.+
T Consensus 245 ~~~~~~i~~vGrl~~~Kg~~~-li~A~~~l~~~~~---------~-~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~ 313 (439)
T TIGR02472 245 DPEKPPILAISRPDRRKNIPS-LVEAYGRSPKLQE---------M-ANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRY 313 (439)
T ss_pred ccCCcEEEEEcCCcccCCHHH-HHHHHHhChhhhh---------h-ccEEEEeCCccccccccHHHHHHHHHHHHHHHHc
Confidence 466789999999999999999 9998876533321 0 222345676543221 2233444455555432
Q ss_pred cCCCCCCCcceEEEEcCCCHHHHHhhcccc----ccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCc
Q 005402 495 NHDPEIGDLLKVIFVPDYNVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEE 570 (698)
Q Consensus 495 n~dp~~~~~lkvvf~~nY~~~lA~~i~~g~----Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~ 570 (698)
. +.+ +|.|.....-+-...++++| |+++.||+ .|+.|++-+-||..|.+.|+|..|-..|+++. ++
T Consensus 314 ~----l~~--~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~--~~ 383 (439)
T TIGR02472 314 D----LYG--KVAYPKHHRPDDVPELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIAN--CR 383 (439)
T ss_pred C----CCc--eEEecCCCCHHHHHHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC--CC
Confidence 2 556 77776544444444555544 99999999 99999999999999999999987755555422 12
Q ss_pred ceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHH
Q 005402 571 NFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQE 650 (698)
Q Consensus 571 N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~ 650 (698)
|||+ +.+.|.++|.++|.
T Consensus 384 ~G~l-------------------------------------v~~~d~~~la~~i~------------------------- 401 (439)
T TIGR02472 384 NGLL-------------------------------------VDVLDLEAIASALE------------------------- 401 (439)
T ss_pred cEEE-------------------------------------eCCCCHHHHHHHHH-------------------------
Confidence 3332 33445566655553
Q ss_pred HHHHHhcCHHHHHHHHHHHhcc-CCCCChHHHHHHHHHHH
Q 005402 651 KVDEAYCDQKRWTRMSIMNTAG-SSKFSSDRTIQEYARDI 689 (698)
Q Consensus 651 ~a~~~Y~d~~~W~~~~~~~ma~-~~~FS~drsi~eY~~~i 689 (698)
+ +..|++.|.+|..++-+. ...|||++++++|.+.+
T Consensus 402 ~---ll~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 402 D---ALSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred H---HHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 2 345778888877776543 26899999999998764
No 26
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.95 E-value=9.6e-09 Score=124.15 Aligned_cols=189 Identities=13% Similarity=0.152 Sum_probs=129.2
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHH---HHHHHHHHHHHhhhh
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ---AKRIVKFITDVGATV 494 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~---~K~iIk~i~~~a~~i 494 (698)
+|+.+++.++.|+.+.|+++. ++..+.++.++.. ....++| +|.+...... .....+.+..+++..
T Consensus 476 ~pdkpvIL~VGRL~p~KGi~~-LIeAf~~L~~l~~---------~~nL~LI-iG~gdd~d~l~~~~~~~l~~L~~li~~l 544 (1050)
T TIGR02468 476 NPRKPMILALARPDPKKNITT-LVKAFGECRPLRE---------LANLTLI-MGNRDDIDEMSSGSSSVLTSVLKLIDKY 544 (1050)
T ss_pred cCCCcEEEEEcCCccccCHHH-HHHHHHHhHhhcc---------CCCEEEE-EecCchhhhhhccchHHHHHHHHHHHHh
Confidence 688899999999999999999 9999888754321 1134544 5654322221 122333444444432
Q ss_pred cCCCCCCCcceEEEEcCC-CHHHHHhhcccc----ccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccC
Q 005402 495 NHDPEIGDLLKVIFVPDY-NVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE 569 (698)
Q Consensus 495 n~dp~~~~~lkvvf~~nY-~~~lA~~i~~g~----Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~ 569 (698)
+ +.+ +|.|.--- ..++. .++..| |++.+||+ +|+-|+.-+-||..|.+.|+|..|...|+++..
T Consensus 545 g----L~g--~V~FlG~v~~edvp-~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g-- 613 (1050)
T TIGR02468 545 D----LYG--QVAYPKHHKQSDVP-DIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVL-- 613 (1050)
T ss_pred C----CCC--eEEecCCCCHHHHH-HHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccC--
Confidence 2 556 77775322 33444 444444 79999999 999999999999999999999888766665432
Q ss_pred cceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHH
Q 005402 570 ENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQ 649 (698)
Q Consensus 570 ~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq 649 (698)
+|||++ .+.|.++|.++|.
T Consensus 614 ~nGlLV-------------------------------------dP~D~eaLA~AL~------------------------ 632 (1050)
T TIGR02468 614 DNGLLV-------------------------------------DPHDQQAIADALL------------------------ 632 (1050)
T ss_pred CcEEEE-------------------------------------CCCCHHHHHHHHH------------------------
Confidence 344443 3345555555543
Q ss_pred HHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhccc
Q 005402 650 EKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNII 693 (698)
Q Consensus 650 ~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~~ 693 (698)
.+..|++.|.+|..++......|||++++++|.+.+=.+.
T Consensus 633 ----~LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~ 672 (1050)
T TIGR02468 633 ----KLVADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCR 672 (1050)
T ss_pred ----HHhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHh
Confidence 3456899999999888766568999999999998876543
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.94 E-value=1.3e-08 Score=109.52 Aligned_cols=131 Identities=16% Similarity=0.168 Sum_probs=99.8
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.++++++.|+.+.|++++ ++.++.++.+.. . ...++++++.|.+.+.....-...+.+.++++..
T Consensus 208 ~~~~~~i~~~grl~~~Kg~~~-ll~a~~~l~~~~---~-----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~--- 275 (392)
T cd03805 208 KSGKKTFLSINRFERKKNIAL-AIEAFAILKDKL---A-----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEEL--- 275 (392)
T ss_pred CCCceEEEEEeeecccCChHH-HHHHHHHHHhhc---c-----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHh---
Confidence 467789999999999999999 999998875421 0 0026899999998876544433334455555420
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhh
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 564 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~ 564 (698)
..+.+ +|.|+.....+....++.+||+++.||+ .|..|++-+-||..|++.|+|..|...|++
T Consensus 276 ~~l~~--~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i 338 (392)
T cd03805 276 LLLED--QVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETV 338 (392)
T ss_pred cCCCc--eEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHh
Confidence 12345 8999988877777889999999999999 899999999999999999998777555544
No 28
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.92 E-value=3.3e-08 Score=108.13 Aligned_cols=192 Identities=17% Similarity=0.187 Sum_probs=131.3
Q ss_pred HHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCH-HHHHHHHHH
Q 005402 409 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV-QAKRIVKFI 487 (698)
Q Consensus 409 l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~-~~K~iIk~i 487 (698)
+++++|. +++...+.++.|+..+|+.+. ++..+.++.+- ..++++++.|.+..... ......+.+
T Consensus 183 ~~~~~~~--~~~~~~il~~Grl~~~Kg~~~-Li~A~~~l~~~-----------~p~~~lvivG~g~~~~~~~~~~~~~~l 248 (380)
T PRK15484 183 LRQQLNI--SPDETVLLYAGRISPDKGILL-LMQAFEKLATA-----------HSNLKLVVVGDPTASSKGEKAAYQKKV 248 (380)
T ss_pred HHHHhCC--CCCCeEEEEeccCccccCHHH-HHHHHHHHHHh-----------CCCeEEEEEeCCccccccchhHHHHHH
Confidence 4456664 355678899999999999999 99988876532 12588999997753221 122344456
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcc-cCCCchhhHHHhcCceeeeeccccchhhhhh
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGM-EASGTSNMKFAMNGCILIGTLDGANVEIRQE 566 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~-EasGts~Mka~~NG~l~ist~DGw~vEi~~~ 566 (698)
.++++. .+. +|.|+....-+-...++++||+++.||+ + |+.|+.-+-||..|.+.|+|..|...|+++.
T Consensus 249 ~~~~~~------l~~--~v~~~G~~~~~~l~~~~~~aDv~v~pS~--~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~ 318 (380)
T PRK15484 249 LEAAKR------IGD--RCIMLGGQPPEKMHNYYPLADLVVVPSQ--VEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE 318 (380)
T ss_pred HHHHHh------cCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--CccccccHHHHHHHcCCCEEEeCCCCcHhhccc
Confidence 666653 223 6777766665666788999999999998 6 9999999999999999999988877776644
Q ss_pred ccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHH
Q 005402 567 VGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYL 646 (698)
Q Consensus 567 ~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~ 646 (698)
. .|||++ +.+.|.++|.++|.
T Consensus 319 ~--~~G~~l------------------------------------~~~~d~~~la~~I~--------------------- 339 (380)
T PRK15484 319 G--ITGYHL------------------------------------AEPMTSDSIISDIN--------------------- 339 (380)
T ss_pred C--CceEEE------------------------------------eCCCCHHHHHHHHH---------------------
Confidence 2 344422 11234555555553
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhcc-CCCCChHHHHHHHHHHHhc
Q 005402 647 ECQEKVDEAYCDQKRWTRMSIMNTAG-SSKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 647 ~aq~~a~~~Y~d~~~W~~~~~~~ma~-~~~FS~drsi~eY~~~iw~ 691 (698)
+ +..|++. .++..++-.. ...|||++++++|.+.+-+
T Consensus 340 ----~---ll~d~~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 340 ----R---TLADPEL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred ----H---HHcCHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 2 2345543 4555555432 2699999999999987654
No 29
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.92 E-value=1.3e-08 Score=108.64 Aligned_cols=180 Identities=13% Similarity=0.126 Sum_probs=128.0
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.+.++++.|+..+|+.++ ++..+.++.+. ..++++++.|.+...+... ....+..+++..+
T Consensus 217 ~~~~~~i~~~gr~~~~k~~~~-ll~a~~~l~~~-----------~~~~~l~i~G~~~~~~~~~--~~~~~~~~~~~~~-- 280 (398)
T cd03800 217 DPDKPRILAVGRLDPRKGIDT-LIRAYAELPEL-----------RERANLVIVGGPRDDILAM--DEEELRELARELG-- 280 (398)
T ss_pred CCCCcEEEEEcccccccCHHH-HHHHHHHHHHh-----------CCCeEEEEEECCCCcchhh--hhHHHHHHHHhcC--
Confidence 456788999999999999999 99988887543 1267898888776554322 1111333333211
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 577 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~ 577 (698)
..+ +|.|+.-.+.+-...+++.||++++||+ .|++|++-+-||..|++.|++-.|...|+++..
T Consensus 281 --~~~--~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~---------- 344 (398)
T cd03800 281 --VID--RVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTALEAMACGLPVVATAVGGPRDIVVDG---------- 344 (398)
T ss_pred --CCc--eEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHHHHHHhcCCCEEECCCCCHHHHccCC----------
Confidence 234 6888877777777778889999999999 899999999999999999988777555544322
Q ss_pred chhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHh
Q 005402 578 RAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY 656 (698)
Q Consensus 578 ~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y 656 (698)
.+|+ +.+.|.+++.+.|. .+.
T Consensus 345 ------------------------------~~g~~~~~~~~~~l~~~i~----------------------------~l~ 366 (398)
T cd03800 345 ------------------------------VTGLLVDPRDPEALAAALR----------------------------RLL 366 (398)
T ss_pred ------------------------------CCeEEeCCCCHHHHHHHHH----------------------------HHH
Confidence 2233 33334555555443 345
Q ss_pred cCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 005402 657 CDQKRWTRMSIMNTAGS-SKFSSDRTIQEYAR 687 (698)
Q Consensus 657 ~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~ 687 (698)
.|++.|.++..++.... ..|||+.++++|.+
T Consensus 367 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 398 (398)
T cd03800 367 TDPALRRRLSRAGLRRARARYTWERVAARLLE 398 (398)
T ss_pred hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHhC
Confidence 68888999988887654 69999999999863
No 30
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.89 E-value=1.5e-08 Score=114.12 Aligned_cols=181 Identities=15% Similarity=0.126 Sum_probs=129.0
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.+.++++.|+...|+.+. +++.+.++.+- ..++++++.|.+.......+++-+++.++.
T Consensus 290 ~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~-----------~p~~~l~IvG~g~~~~~~~~e~~~li~~l~------ 351 (475)
T cd03813 290 EKEPPVVGLIGRVVPIKDIKT-FIRAAAIVRKK-----------IPDAEGWVIGPTDEDPEYAEECRELVESLG------ 351 (475)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHHHHHh-----------CCCeEEEEECCCCcChHHHHHHHHHHHHhC------
Confidence 456789999999999999999 99988776542 126899999988543333333333333322
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 577 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~ 577 (698)
+.+ +|.|+. ..++. .+++.+|+++.||+ .|++|++-+-||..|.+.|+|..|...|+++..+++ .||
T Consensus 352 --l~~--~V~f~G--~~~v~-~~l~~aDv~vlpS~--~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~---~~g- 418 (475)
T cd03813 352 --LED--NVKFTG--FQNVK-EYLPKLDVLVLTSI--SEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDE---ALG- 418 (475)
T ss_pred --CCC--eEEEcC--CccHH-HHHHhCCEEEeCch--hhcCChHHHHHHHcCCCEEECCCCChHHHhcCCccc---ccC-
Confidence 345 788876 34444 56789999999999 899999999999999999999888766665443210 111
Q ss_pred chhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHh
Q 005402 578 RAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY 656 (698)
Q Consensus 578 ~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y 656 (698)
.+|. +.+.|.+++.++|. .+.
T Consensus 419 ------------------------------~~G~lv~~~d~~~la~ai~----------------------------~ll 440 (475)
T cd03813 419 ------------------------------PAGEVVPPADPEALARAIL----------------------------RLL 440 (475)
T ss_pred ------------------------------CceEEECCCCHHHHHHHHH----------------------------HHh
Confidence 1343 44445666665554 245
Q ss_pred cCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 005402 657 CDQKRWTRMSIMNTAGS-SKFSSDRTIQEYAR 687 (698)
Q Consensus 657 ~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~ 687 (698)
.|++.|.++..++-+.. ..|||++++++|.+
T Consensus 441 ~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 441 KDPELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 78899999988887643 68999999999987
No 31
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.89 E-value=1.9e-08 Score=110.05 Aligned_cols=120 Identities=16% Similarity=0.152 Sum_probs=91.2
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
+++.+.++++.|+.++|++++ ++..+..+.+- ..+.+++++|.+. .... +.++.+..
T Consensus 190 ~~~~~~i~~~grl~~~Kg~~~-li~a~~~l~~~-----------~~~~~l~i~G~g~-~~~~-------l~~~~~~~--- 246 (398)
T cd03796 190 DNDKITIVVISRLVYRKGIDL-LVGIIPEICKK-----------HPNVRFIIGGDGP-KRIL-------LEEMREKY--- 246 (398)
T ss_pred CCCceEEEEEeccchhcCHHH-HHHHHHHHHhh-----------CCCEEEEEEeCCc-hHHH-------HHHHHHHh---
Confidence 467789999999999999999 99988766432 1268999999874 2221 22222211
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhh
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQ 565 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~ 565 (698)
.+.+ +|.|+...+.+-...++++||++++||+ .|++|++-+-||..|++.|+|..|...|+++
T Consensus 247 -~l~~--~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~ 309 (398)
T cd03796 247 -NLQD--RVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLP 309 (398)
T ss_pred -CCCC--eEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhhee
Confidence 1345 7888766666677778899999999999 8999999999999999999998886666553
No 32
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=98.89 E-value=4.6e-08 Score=112.01 Aligned_cols=152 Identities=18% Similarity=0.220 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHh-C-CCCCCCCceeee-ccccch-hhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCC-
Q 005402 400 EESTDVVSFIKEKT-G-YSVSPDAMFDIQ-VKRIHE-YKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAF- 474 (698)
Q Consensus 400 ~~K~~l~~~l~~~~-g-~~~~~~~~~~~~-v~R~~~-yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~- 474 (698)
..|.++.++++..+ | ..++|+.+++.+ +.|+.- .||.|+ ++..+.|+.+.+..+..+. .+=.-+||-++..
T Consensus 274 ~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDv-lIeAl~rLn~~l~~~~~~~---tVvafii~p~~~~~ 349 (590)
T cd03793 274 QSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADM-FLEALARLNYLLKVEGSDT---TVVAFFIMPAKTNN 349 (590)
T ss_pred HhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHH-HHHHHHHHHHHHHhcCCCC---eEEEEEEecCccCC
Confidence 56777777653321 2 235777777777 799988 999999 9999999987533111111 0112234555532
Q ss_pred ------ccCHHHHHHHHHHHHHhhhhc-------------------------------------CCC-------------
Q 005402 475 ------ATYVQAKRIVKFITDVGATVN-------------------------------------HDP------------- 498 (698)
Q Consensus 475 ------p~~~~~K~iIk~i~~~a~~in-------------------------------------~dp------------- 498 (698)
.+....|++-.-+.++.++|. ..|
T Consensus 350 ~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D 429 (590)
T cd03793 350 FNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDAND 429 (590)
T ss_pred cCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccC
Confidence 011211222222222111111 111
Q ss_pred -------------CCCCcceEEEEcCC--------CHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecc
Q 005402 499 -------------EIGDLLKVIFVPDY--------NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD 557 (698)
Q Consensus 499 -------------~~~~~lkvvf~~nY--------~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~D 557 (698)
.-.++.||+|+|.| +++ -..+++|||+++.||+ +|+.|..-+-||..|++.|+|.-
T Consensus 430 ~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~-y~E~~~g~dl~v~PS~--yE~fG~~~lEAma~G~PvI~t~~ 506 (590)
T cd03793 430 PILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLD-YEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSITTNL 506 (590)
T ss_pred HHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcc-hHHHhhhceEEEeccc--cCCCCcHHHHHHHcCCCEEEccC
Confidence 01468999999987 553 3456899999999999 99999999999999999998866
Q ss_pred c
Q 005402 558 G 558 (698)
Q Consensus 558 G 558 (698)
+
T Consensus 507 ~ 507 (590)
T cd03793 507 S 507 (590)
T ss_pred c
Confidence 4
No 33
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.86 E-value=1.6e-08 Score=110.29 Aligned_cols=183 Identities=14% Similarity=0.147 Sum_probs=125.9
Q ss_pred CCCCCceeeeccc-cchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHH----HH-HHHHHHHHH
Q 005402 417 VSPDAMFDIQVKR-IHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ----AK-RIVKFITDV 490 (698)
Q Consensus 417 ~~~~~~~~~~v~R-~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~----~K-~iIk~i~~~ 490 (698)
+.++.++++++.| +..+|+.++ +++.+.++.+. ..++++++.|.+.|.|.. +. ..-+++.++
T Consensus 207 ~~~~~~~i~~vgR~l~~~Kg~~~-ll~a~~~l~~~-----------~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~ 274 (396)
T cd03818 207 LTPGDEVITFVARNLEPYRGFHV-FMRALPRLLRA-----------RPDARVVIVGGDGVSYGAPPPDGESWKQHMLDEL 274 (396)
T ss_pred CCCCCeEEEEECCCcccccCHHH-HHHHHHHHHHH-----------CCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHh
Confidence 4567788999998 999999999 99988877542 125889999986654421 11 111223333
Q ss_pred hhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCc
Q 005402 491 GATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEE 570 (698)
Q Consensus 491 a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~ 570 (698)
+...+ .+ +|.|+....-+-...+++.||+++.||+ .|..|.+-+-||.-|++.|+|..|...|+++.. +
T Consensus 275 ~~~~~-----~~--~V~f~G~v~~~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~--~ 343 (396)
T cd03818 275 GGRLD-----LS--RVHFLGRVPYDQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVREVITDG--E 343 (396)
T ss_pred hcccC-----cc--eEEEeCCCCHHHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchhhcccC--C
Confidence 32111 13 7888876666666678899999999999 899999999999999999999877655554331 2
Q ss_pred ceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHH
Q 005402 571 NFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQE 650 (698)
Q Consensus 571 N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~ 650 (698)
||+++ .+.|.++|.++|.
T Consensus 344 ~G~lv-------------------------------------~~~d~~~la~~i~------------------------- 361 (396)
T cd03818 344 NGLLV-------------------------------------DFFDPDALAAAVI------------------------- 361 (396)
T ss_pred ceEEc-------------------------------------CCCCHHHHHHHHH-------------------------
Confidence 33332 2334555554443
Q ss_pred HHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 005402 651 KVDEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYAR 687 (698)
Q Consensus 651 ~a~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~ 687 (698)
.+..|++.+.+|..++-... ..|||++++++|.+
T Consensus 362 ---~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 362 ---ELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred ---HHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 23467777888877776654 46999999999863
No 34
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=98.85 E-value=3.1e-07 Score=103.68 Aligned_cols=123 Identities=11% Similarity=-0.060 Sum_probs=86.3
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccC-HHHHHHHHHHHHHhhhhcCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~-~~~K~iIk~i~~~a~~in~d 497 (698)
++.++++++.|++..|+.+. ++..+.++.+- .|..+ ..+++++.|.+..++ ...+++.+.+.+++..+|..
T Consensus 262 ~~~~~il~vgRl~~~Kgi~~-ll~A~~~ll~~---~p~~~----~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~ 333 (460)
T cd03788 262 GGRKLIVGVDRLDYSKGIPE-RLLAFERLLER---YPEWR----GKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGK 333 (460)
T ss_pred CCCEEEEEecCccccCCHHH-HHHHHHHHHHh---Chhhc----CCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhc
Confidence 56789999999999999999 99998887542 22211 136777766554222 23345666777777666531
Q ss_pred CCCCCcceEEEEcCC-CHHHHHhhccccccccccCCCcccCCCchhhHHHhcCce
Q 005402 498 PEIGDLLKVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCI 551 (698)
Q Consensus 498 p~~~~~lkvvf~~nY-~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l 551 (698)
-...+.-.|.|+.++ +-+--..++++||+++.||+ .|.-|+.-+-||.-|.+
T Consensus 334 ~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~--~Eg~~lv~lEAma~g~p 386 (460)
T cd03788 334 FGTLDWTPVRYLYRSLPREELAALYRAADVALVTPL--RDGMNLVAKEYVACQDD 386 (460)
T ss_pred cCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCcc--ccccCcccceeEEEecC
Confidence 000111247777654 66666678899999999999 89999999999999996
No 35
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.85 E-value=4.3e-08 Score=102.27 Aligned_cols=180 Identities=13% Similarity=0.069 Sum_probs=125.1
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHH-HHHHHHHhhhhcC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRI-VKFITDVGATVNH 496 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~i-Ik~i~~~a~~in~ 496 (698)
.++.+.++++.|+.++|+.++ ++..+.++.+. ..++++++.|.+++.....+.. .+++.++.
T Consensus 182 ~~~~~~i~~~G~~~~~K~~~~-ll~a~~~~~~~-----------~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~----- 244 (366)
T cd03822 182 LDGRPVLLTFGLLRPYKGLEL-LLEALPLLVAK-----------HPDVRLLVAGETHPDLERYRGEAYALAERLG----- 244 (366)
T ss_pred CCCCeEEEEEeeccCCCCHHH-HHHHHHHHHhh-----------CCCeEEEEeccCccchhhhhhhhHhHHHhcC-----
Confidence 345788999999999999999 99988876542 1268999999988766543211 01122221
Q ss_pred CCCCCCcceEEEEcC-CCHHHHHhhccccccccccCCCccc--CCCchhhHHHhcCceeeeeccccchhhhhhccCccee
Q 005402 497 DPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGME--ASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 573 (698)
Q Consensus 497 dp~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~E--asGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~ 573 (698)
..+ +|.|+.+ .+.+-...+++.||+.++||+ .| ..|..-+-||..|.+.|+|-.|. .|.+.. +.+++
T Consensus 245 ---~~~--~v~~~~~~~~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~--~~~g~ 314 (366)
T cd03822 245 ---LAD--RVIFINRYLPDEELPELFSAADVVVLPYR--SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLD--GGTGL 314 (366)
T ss_pred ---CCC--cEEEecCcCCHHHHHHHHhhcCEEEeccc--ccccccchHHHHHHHcCCCEEecCCCC-hheeee--CCCcE
Confidence 345 7999988 555666778899999999999 88 77777888999999999877664 322211 11222
Q ss_pred ecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHH
Q 005402 574 LFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVD 653 (698)
Q Consensus 574 ~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~ 653 (698)
+ +.+.|.+++.+.|.
T Consensus 315 ~-------------------------------------~~~~d~~~~~~~l~---------------------------- 329 (366)
T cd03822 315 L-------------------------------------VPPGDPAALAEAIR---------------------------- 329 (366)
T ss_pred E-------------------------------------EcCCCHHHHHHHHH----------------------------
Confidence 2 33334555554443
Q ss_pred HHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 654 EAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 654 ~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
.+..|++.+.++..++......|||++.+++|.+.+
T Consensus 330 ~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 330 RLLADPELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHcChHHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 335678888888888876655699999999998753
No 36
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.84 E-value=2.6e-08 Score=103.78 Aligned_cols=174 Identities=16% Similarity=0.095 Sum_probs=126.1
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.+.++++.|+..+|+.++ ++..+..+... ..++++++.|.+.+.+......+ .+..
T Consensus 192 ~~~~~~i~~~G~~~~~K~~~~-~l~~~~~~~~~-----------~~~~~l~i~G~~~~~~~~~~~~~---~~~~------ 250 (365)
T cd03809 192 LLPRPYFLYVGTIEPRKNLER-LLEAFARLPAK-----------GPDPKLVIVGKRGWLNEELLARL---RELG------ 250 (365)
T ss_pred CCCCCeEEEeCCCccccCHHH-HHHHHHHHHHh-----------cCCCCEEEecCCccccHHHHHHH---HHcC------
Confidence 355678999999999999999 98888776542 11578999999888777663333 1111
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 577 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~ 577 (698)
..+ +|.|+...+.+-...+++.||+.++||+ .|..|++-+-||..|.+.|+|.-|+..|++.. ++++
T Consensus 251 --~~~--~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~----~~~~--- 317 (365)
T cd03809 251 --LGD--RVRFLGYVSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSLPEVAGD----AALY--- 317 (365)
T ss_pred --CCC--eEEECCCCChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCccceecC----ceee---
Confidence 234 7888877777777888999999999999 89999999999999999998877755554311 1111
Q ss_pred chhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc
Q 005402 578 RAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 657 (698)
Q Consensus 578 ~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~ 657 (698)
+.+.+.+++.+.|. .+..
T Consensus 318 ----------------------------------~~~~~~~~~~~~i~----------------------------~l~~ 335 (365)
T cd03809 318 ----------------------------------FDPLDPEALAAAIE----------------------------RLLE 335 (365)
T ss_pred ----------------------------------eCCCCHHHHHHHHH----------------------------HHhc
Confidence 22334555554443 2356
Q ss_pred CHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 005402 658 DQKRWTRMSIMNTAGSSKFSSDRTIQEYAR 687 (698)
Q Consensus 658 d~~~W~~~~~~~ma~~~~FS~drsi~eY~~ 687 (698)
|++...++..++.+....|||++++++|.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 336 DPALREELRERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHhC
Confidence 788888887777544579999999999863
No 37
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.83 E-value=2.9e-08 Score=106.68 Aligned_cols=181 Identities=17% Similarity=0.117 Sum_probs=119.0
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.++++++.|+.++|++++ ++..+.++.+- .+.. ..++++++.|.+... +.+.+++.++.
T Consensus 191 ~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~---~~~~----~~~~~l~i~G~g~~~----~~~~~~~~~~~------ 252 (374)
T TIGR03088 191 ADESVVVGTVGRLQAVKDQPT-LVRAFALLVRQ---LPEG----AERLRLVIVGDGPAR----GACEQMVRAAG------ 252 (374)
T ss_pred CCCCeEEEEEecCCcccCHHH-HHHHHHHHHHh---Cccc----ccceEEEEecCCchH----HHHHHHHHHcC------
Confidence 356789999999999999999 99988887542 1110 125899999976421 22222222221
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 577 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~ 577 (698)
+.+ .+++.++..++ ..++++||++++||+ .|++|++-+-||..|.+.|+|.-|-..|+++.. .+||+
T Consensus 253 --~~~---~v~~~g~~~~~-~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~--~~g~~--- 319 (374)
T TIGR03088 253 --LAH---LVWLPGERDDV-PALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQHG--VTGAL--- 319 (374)
T ss_pred --Ccc---eEEEcCCcCCH-HHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCC--CceEE---
Confidence 233 44455554333 567799999999999 999999999999999999988776555444321 22222
Q ss_pred chhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc
Q 005402 578 RAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 657 (698)
Q Consensus 578 ~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~ 657 (698)
+.+.|.+++.++|. + +..
T Consensus 320 ----------------------------------~~~~d~~~la~~i~-------------------------~---l~~ 337 (374)
T TIGR03088 320 ----------------------------------VPPGDAVALARALQ-------------------------P---YVS 337 (374)
T ss_pred ----------------------------------eCCCCHHHHHHHHH-------------------------H---HHh
Confidence 33334555555553 2 345
Q ss_pred CHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhc
Q 005402 658 DQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 658 d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~iw~ 691 (698)
+++.+.++..++-... ..|||++++++|.+..-+
T Consensus 338 ~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 338 DPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 6666666655553332 599999999999876543
No 38
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.82 E-value=6.1e-08 Score=107.34 Aligned_cols=179 Identities=16% Similarity=0.084 Sum_probs=125.3
Q ss_pred CCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCC
Q 005402 420 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 499 (698)
Q Consensus 420 ~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~ 499 (698)
+.+.++++.|+.++|+.+. ++..+.++.+- ..++++++.|.|... .++.+++.++.
T Consensus 221 ~~~~il~vGrl~~~Kg~~~-ll~a~~~l~~~-----------~~~~~l~ivG~G~~~----~~l~~~~~~~~-------- 276 (406)
T PRK15427 221 TPLEIISVARLTEKKGLHV-AIEACRQLKEQ-----------GVAFRYRILGIGPWE----RRLRTLIEQYQ-------- 276 (406)
T ss_pred CCeEEEEEeCcchhcCHHH-HHHHHHHHHhh-----------CCCEEEEEEECchhH----HHHHHHHHHcC--------
Confidence 3456889999999999999 99988776432 126899999987421 22223332222
Q ss_pred CCCcceEEEEcCCCHHHHHhhccccccccccCCCc----ccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeec
Q 005402 500 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAG----MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 575 (698)
Q Consensus 500 ~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~----~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~f 575 (698)
+.+ +|.|.--.+-+-...+++.||+++.||+.+ +|..|+.-|-||..|.+.|+|..|...|+++.. +|||++
T Consensus 277 l~~--~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~--~~G~lv 352 (406)
T PRK15427 277 LED--VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEAD--KSGWLV 352 (406)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCC--CceEEe
Confidence 345 677765445455567889999999999853 588999999999999999999888666655332 233333
Q ss_pred ccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHH
Q 005402 576 GARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 655 (698)
Q Consensus 576 G~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~ 655 (698)
.+.|.++|.++|. .+
T Consensus 353 -------------------------------------~~~d~~~la~ai~----------------------------~l 367 (406)
T PRK15427 353 -------------------------------------PENDAQALAQRLA----------------------------AF 367 (406)
T ss_pred -------------------------------------CCCCHHHHHHHHH----------------------------HH
Confidence 3345555555553 34
Q ss_pred hc-CHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhc
Q 005402 656 YC-DQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 656 Y~-d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~iw~ 691 (698)
.. |++.+.+|..++-... ..|||++.+++|++.+-+
T Consensus 368 ~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 368 SQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 45 8888888888875543 699999999999987643
No 39
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.80 E-value=6.7e-08 Score=102.67 Aligned_cols=179 Identities=17% Similarity=0.239 Sum_probs=122.6
Q ss_pred HHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHH
Q 005402 410 KEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD 489 (698)
Q Consensus 410 ~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~ 489 (698)
+++++. .++.++++++.|+.++|+.+. ++..+.++.+- .+.++++.|.+.. . +. +.+
T Consensus 188 ~~~~~~--~~~~~~il~~g~l~~~K~~~~-li~a~~~l~~~------------~~~~l~i~G~g~~--~--~~----~~~ 244 (371)
T cd04962 188 KRRLGA--PEGEKVLIHISNFRPVKRIDD-VIRIFAKVRKE------------VPARLLLVGDGPE--R--SP----AER 244 (371)
T ss_pred HHhcCC--CCCCeEEEEecccccccCHHH-HHHHHHHHHhc------------CCceEEEEcCCcC--H--HH----HHH
Confidence 445564 456788999999999999999 98887775321 2689999998742 2 12 222
Q ss_pred HhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccC
Q 005402 490 VGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE 569 (698)
Q Consensus 490 ~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~ 569 (698)
.++..+ +.+ +|.|+. +...+ ..++++||++++||+ .|+.|++-+-||..|.+.|+|-.|-..|++++.
T Consensus 245 ~~~~~~----~~~--~v~~~g-~~~~~-~~~~~~~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~-- 312 (371)
T cd04962 245 LARELG----LQD--DVLFLG-KQDHV-EELLSIADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPEVVKHG-- 312 (371)
T ss_pred HHHHcC----CCc--eEEEec-CcccH-HHHHHhcCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCC--
Confidence 332211 334 677665 44444 567899999999999 999999999999999999988666443333221
Q ss_pred cceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHH
Q 005402 570 ENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLEC 648 (698)
Q Consensus 570 ~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~a 648 (698)
.+|+ +.+.|.+++.+.+.
T Consensus 313 --------------------------------------~~G~~~~~~~~~~l~~~i~----------------------- 331 (371)
T cd04962 313 --------------------------------------ETGFLVDVGDVEAMAEYAL----------------------- 331 (371)
T ss_pred --------------------------------------CceEEcCCCCHHHHHHHHH-----------------------
Confidence 2333 33334555554443
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhcc-CCCCChHHHHHHHHHHH
Q 005402 649 QEKVDEAYCDQKRWTRMSIMNTAG-SSKFSSDRTIQEYARDI 689 (698)
Q Consensus 649 q~~a~~~Y~d~~~W~~~~~~~ma~-~~~FS~drsi~eY~~~i 689 (698)
.+..|++.+.+|..++-.. ...|||+..+++|.+..
T Consensus 332 -----~l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 368 (371)
T cd04962 332 -----SLLEDDELWQEFSRAARNRAAERFDSERIVPQYEALY 368 (371)
T ss_pred -----HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3456788888887777654 36899999999998653
No 40
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.80 E-value=5.1e-08 Score=99.94 Aligned_cols=173 Identities=17% Similarity=0.053 Sum_probs=121.6
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.+.++++.|+..+|+.++ ++..+.++.+. ..+++|++.|.+.+.+...+. ++....
T Consensus 185 ~~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~~-----------~~~~~l~i~G~~~~~~~~~~~---~~~~~~------ 243 (359)
T cd03808 185 PEDDPVFLFVARLLKDKGIDE-LLEAARILKAK-----------GPNVRLLLVGDGDEENPAAIL---EIEKLG------ 243 (359)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHHHHhc-----------CCCeEEEEEcCCCcchhhHHH---HHHhcC------
Confidence 456789999999999999999 99888776432 126899999999887765533 111111
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 577 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~ 577 (698)
... +|.|+.. .+-...+++.||+.+.||+ .|.+|++-+-||..|.+.|+|..|...|+++.. ++||+
T Consensus 244 --~~~--~v~~~g~--~~~~~~~~~~adi~i~ps~--~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~--~~g~~--- 310 (359)
T cd03808 244 --LEG--RVEFLGF--RDDVPELLAAADVFVLPSY--REGLPRVLLEAMAMGRPVIATDVPGCREAVIDG--VNGFL--- 310 (359)
T ss_pred --Ccc--eEEEeec--cccHHHHHHhccEEEecCc--ccCcchHHHHHHHcCCCEEEecCCCchhhhhcC--cceEE---
Confidence 123 5666554 3345567899999999999 699999999999999999988666554444321 22332
Q ss_pred chhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc
Q 005402 578 RAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 657 (698)
Q Consensus 578 ~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~ 657 (698)
+.+.|.+++.+.|. .+..
T Consensus 311 ----------------------------------~~~~~~~~~~~~i~----------------------------~l~~ 328 (359)
T cd03808 311 ----------------------------------VPPGDAEALADAIE----------------------------RLIE 328 (359)
T ss_pred ----------------------------------ECCCCHHHHHHHHH----------------------------HHHh
Confidence 22334555554443 2456
Q ss_pred CHHHHHHHHHHHhcc-CCCCChHHHHHHHH
Q 005402 658 DQKRWTRMSIMNTAG-SSKFSSDRTIQEYA 686 (698)
Q Consensus 658 d~~~W~~~~~~~ma~-~~~FS~drsi~eY~ 686 (698)
|++.+.++..++... ...|||++.+++|.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 329 DPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred CHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 788888888777655 46999999999885
No 41
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.77 E-value=1.3e-07 Score=97.40 Aligned_cols=125 Identities=20% Similarity=0.183 Sum_probs=89.5
Q ss_pred HHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHH
Q 005402 409 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 488 (698)
Q Consensus 409 l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~ 488 (698)
+++++|. +++.++++++.|+..+|+.++ ++..+.++.+- ..++++++.|++....... ..++
T Consensus 183 ~~~~~~~--~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~-----------~~~~~l~i~G~~~~~~~~~-~~~~--- 244 (365)
T cd03807 183 LREELGL--PEDTFLIGIVARLHPQKDHAT-LLRAAALLLKK-----------FPNARLLLVGDGPDRANLE-LLAL--- 244 (365)
T ss_pred HHHhcCC--CCCCeEEEEecccchhcCHHH-HHHHHHHHHHh-----------CCCeEEEEecCCcchhHHH-HHHH---
Confidence 3456665 466789999999999999999 99988776542 1268999999876544322 2211
Q ss_pred HHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhh
Q 005402 489 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 564 (698)
Q Consensus 489 ~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~ 564 (698)
+.. .+.+ +|.|+.. ..++ ..+++.||+.+.||+ .|..|++-+-||..|.+.|++..|+..|++
T Consensus 245 ---~~~----~~~~--~v~~~g~-~~~~-~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~ 307 (365)
T cd03807 245 ---KEL----GLED--KVILLGE-RSDV-PALLNALDVFVLSSL--SEGFPNVLLEAMACGLPVVATDVGDNAELV 307 (365)
T ss_pred ---Hhc----CCCc--eEEEccc-cccH-HHHHHhCCEEEeCCc--cccCCcHHHHHHhcCCCEEEcCCCChHHHh
Confidence 111 1334 5666543 3334 568899999999999 799999999999999999988777655544
No 42
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.74 E-value=1.2e-07 Score=108.70 Aligned_cols=127 Identities=16% Similarity=0.117 Sum_probs=93.3
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.++++++.||+..|++.. ++..+.++.+- ..++++++.|.+.. . .+ +.+.++..+
T Consensus 395 ~~~~~vIg~VgRl~~~Kg~~~-LI~A~a~llk~-----------~pdirLvIVGdG~~--~--ee----Lk~la~elg-- 452 (578)
T PRK15490 395 QDADTTIGGVFRFVGDKNPFA-WIDFAARYLQH-----------HPATRFVLVGDGDL--R--AE----AQKRAEQLG-- 452 (578)
T ss_pred CCCCcEEEEEEEEehhcCHHH-HHHHHHHHHhH-----------CCCeEEEEEeCchh--H--HH----HHHHHHHcC--
Confidence 456688999999999999999 88877766432 12689999998742 1 11 333333211
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 576 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG 576 (698)
+.+ +|.|+. |...+. .+++++|+++.||+ +|+.|.+-+-||..|.+.|+|..|...|++.+ ++|||++.
T Consensus 453 --L~d--~V~FlG-~~~Dv~-~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d--G~nG~LVp 521 (578)
T PRK15490 453 --ILE--RILFVG-ASRDVG-YWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIE--GVSGFILD 521 (578)
T ss_pred --CCC--cEEECC-ChhhHH-HHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHccc--CCcEEEEC
Confidence 334 666664 444444 57899999999999 99999999999999999999999988887754 26677764
No 43
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.73 E-value=8.4e-08 Score=100.56 Aligned_cols=116 Identities=18% Similarity=0.132 Sum_probs=87.9
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
.+.+.+++++|+.++|+.+. ++.++.++. +++++++|.+.... .+.+.+....
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~-li~a~~~l~---------------~~~l~i~G~g~~~~----~~~~~~~~~~------- 241 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDV-LLEAAAALP---------------DAPLVIVGEGPLEA----ELEALAAALG------- 241 (357)
T ss_pred CCCcEEEEecccccccCHHH-HHHHHHhcc---------------CcEEEEEeCChhHH----HHHHHHHhcC-------
Confidence 45678999999999999999 887766531 46899999875322 2222222221
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhh
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 564 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~ 564 (698)
... +|.|+...+-+....+++.||+.++||....|+.|++-+-||..|.+.|+|..|...|.+
T Consensus 242 -~~~--~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i 304 (357)
T cd03795 242 -LLD--RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYV 304 (357)
T ss_pred -Ccc--eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHH
Confidence 234 799988888777778899999999999866899999999999999999988776544433
No 44
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.69 E-value=2.1e-07 Score=89.03 Aligned_cols=131 Identities=18% Similarity=0.158 Sum_probs=94.1
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
..+...+. ..+.+++.++.|+...|+.++ ++.++.++.+-+ .....++|.|.+..... +
T Consensus 4 ~~~~~~~~--~~~~~~il~~g~~~~~K~~~~-li~a~~~l~~~~----------~~~~~l~i~G~~~~~~~--------~ 62 (172)
T PF00534_consen 4 KLREKLKI--PDKKKIILFIGRLDPEKGIDL-LIEAFKKLKEKK----------NPNYKLVIVGDGEYKKE--------L 62 (172)
T ss_dssp HHHHHTTT---TTSEEEEEESESSGGGTHHH-HHHHHHHHHHHH----------HTTEEEEEESHCCHHHH--------H
T ss_pred HHHHHcCC--CCCCeEEEEEecCccccCHHH-HHHHHHHHHhhc----------CCCeEEEEEcccccccc--------c
Confidence 34444443 467789999999999999999 999998886421 12689999994433222 3
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhc
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 567 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~ 567 (698)
...++..+ +.. +|.|+....-.--..++..||+++.||+ .|..|++-+-||..|+++|++..|...|++...
T Consensus 63 ~~~~~~~~----~~~--~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~ 134 (172)
T PF00534_consen 63 KNLIEKLN----LKE--NIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIINDG 134 (172)
T ss_dssp HHHHHHTT----CGT--TEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT
T ss_pred cccccccc----ccc--cccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeeccc
Confidence 33333211 334 6888877776667778888999999999 799999999999999999999888777766443
No 45
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=98.68 E-value=8.3e-06 Score=92.25 Aligned_cols=130 Identities=11% Similarity=0.020 Sum_probs=86.6
Q ss_pred HHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCC-ccCHHHHHHHH
Q 005402 407 SFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAF-ATYVQAKRIVK 485 (698)
Q Consensus 407 ~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~-p~~~~~K~iIk 485 (698)
+.++++++ +..+++.+.|++..|+.+. ++..++++++- .|..+ ..++++..|.+. .....-..+.+
T Consensus 250 ~~lr~~~~-----~~~vIl~VgRLd~~KGi~~-ll~A~~~ll~~---~p~~~----~~v~Lv~v~~p~rg~~~~~~~l~~ 316 (456)
T TIGR02400 250 AELRESLK-----GRKLIIGVDRLDYSKGLPE-RLLAFERFLEE---HPEWR----GKVVLVQIAVPSRGDVPEYQQLRR 316 (456)
T ss_pred HHHHHHcC-----CCeEEEEccccccccCHHH-HHHHHHHHHHh---Ccccc----CceEEEEEecCCccCchHHHHHHH
Confidence 34666653 4578899999999999999 99999998642 33221 135666554322 12233345666
Q ss_pred HHHHHhhhhcCCCCCCCcceEEEEcC-CCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCce
Q 005402 486 FITDVGATVNHDPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCI 551 (698)
Q Consensus 486 ~i~~~a~~in~dp~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l 551 (698)
++.+++..||..-...+...|.++.+ .+-+---.++++||+++.||+ .|.-|+.-+-||.-|.+
T Consensus 317 ~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~--~EG~~Lv~lEamA~g~P 381 (456)
T TIGR02400 317 QVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPL--RDGMNLVAKEYVAAQDP 381 (456)
T ss_pred HHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECcc--ccccCccHHHHHHhcCC
Confidence 67777666663210111122555553 445556678899999999999 89999999999988886
No 46
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.66 E-value=1.4e-07 Score=96.32 Aligned_cols=172 Identities=14% Similarity=0.094 Sum_probs=116.7
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
..+.+.++++.|+...|+.+. ++..+.++.+. ..++++++.|.+..... +.++.+..+
T Consensus 175 ~~~~~~i~~~g~~~~~K~~~~-l~~~~~~l~~~-----------~~~~~l~i~G~~~~~~~--------~~~~~~~~~-- 232 (348)
T cd03820 175 DLKSKRILAVGRLVPQKGFDL-LIEAWAKIAKK-----------HPDWKLRIVGDGPEREA--------LEALIKELG-- 232 (348)
T ss_pred CCCCcEEEEEEeeccccCHHH-HHHHHHHHHhc-----------CCCeEEEEEeCCCCHHH--------HHHHHHHcC--
Confidence 345678999999999999999 99888776542 12689999998764322 222232221
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 577 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~ 577 (698)
... +|.|.. + .+-...+++.||+.+.||+ +|..|++-+-||..|++.|++-.+.-.
T Consensus 233 --~~~--~v~~~g-~-~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~---------------- 288 (348)
T cd03820 233 --LED--RVILLG-F-TKNIEEYYAKASIFVLTSR--FEGFPMVLLEAMAFGLPVISFDCPTGP---------------- 288 (348)
T ss_pred --CCC--eEEEcC-C-cchHHHHHHhCCEEEeCcc--ccccCHHHHHHHHcCCCEEEecCCCch----------------
Confidence 233 455544 4 3445578888999999999 899999999999999999977543211
Q ss_pred chhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHh
Q 005402 578 RAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY 656 (698)
Q Consensus 578 ~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y 656 (698)
+++. +...+|+ +.+.|.+++.+.|. + +.
T Consensus 289 --~~~~---------------------~~~~~g~~~~~~~~~~~~~~i~-------------------------~---ll 317 (348)
T cd03820 289 --SEII---------------------EDGVNGLLVPNGDVEALAEALL-------------------------R---LM 317 (348)
T ss_pred --Hhhh---------------------ccCcceEEeCCCCHHHHHHHHH-------------------------H---HH
Confidence 1111 0112344 44445566665554 3 34
Q ss_pred cCHHHHHHHHHHHhccCCCCChHHHHHHHH
Q 005402 657 CDQKRWTRMSIMNTAGSSKFSSDRTIQEYA 686 (698)
Q Consensus 657 ~d~~~W~~~~~~~ma~~~~FS~drsi~eY~ 686 (698)
.|++.+.++..++......|||++.+++|.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 318 EDEELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred cCHHHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 688888888888755457999999999885
No 47
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.66 E-value=2.1e-07 Score=97.46 Aligned_cols=171 Identities=16% Similarity=0.078 Sum_probs=120.8
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
.+.+.++++.|+..+|+.++ ++..+.++.+- ..+++++|.|.+.+..+ +.+..+..+
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~-l~~~~~~l~~~-----------~~~~~l~i~G~~~~~~~--------~~~~~~~~~--- 233 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDY-LLEALALLKDR-----------GIDFRLDIVGDGPLRDE--------LEALIAELG--- 233 (355)
T ss_pred CCCeEEEEEeeeccccCHHH-HHHHHHHHhhc-----------CCCeEEEEEECCccHHH--------HHHHHHHcC---
Confidence 45678899999999999999 99988876432 12689999998875432 223332211
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcc------cCCCchhhHHHhcCceeeeeccccchhhhhhccCcce
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGM------EASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENF 572 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~------EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~ 572 (698)
.++ +|.|.....-+-...+++.||+.+.||+ . |+.|++-+-||..|.+.|++..|+.-|+++.. .++
T Consensus 234 -~~~--~v~~~g~~~~~~l~~~~~~adi~l~~s~--~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~--~~g 306 (355)
T cd03799 234 -LED--RVTLLGAKSQEEVRELLRAADLFVLPSV--TAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDG--ETG 306 (355)
T ss_pred -CCC--eEEECCcCChHHHHHHHHhCCEEEecce--ecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCC--Cce
Confidence 234 6777777766677888899999999999 6 99999999999999999988777665554332 233
Q ss_pred eecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHH
Q 005402 573 FLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV 652 (698)
Q Consensus 573 ~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a 652 (698)
|++ .+.+.+++.+.|. +
T Consensus 307 ~~~-------------------------------------~~~~~~~l~~~i~-------------------------~- 323 (355)
T cd03799 307 LLV-------------------------------------PPGDPEALADAIE-------------------------R- 323 (355)
T ss_pred EEe-------------------------------------CCCCHHHHHHHHH-------------------------H-
Confidence 333 2334555555553 2
Q ss_pred HHHhcCHHHHHHHHHHHhccC-CCCChHHHHHH
Q 005402 653 DEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQE 684 (698)
Q Consensus 653 ~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~e 684 (698)
+..+++.|.++..++.... ..|||++++++
T Consensus 324 --~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 324 --LLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred --HHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 3357778888888776543 58999988764
No 48
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.65 E-value=2.2e-07 Score=98.52 Aligned_cols=176 Identities=15% Similarity=0.156 Sum_probs=121.7
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
.+.+.++++.|+..+|+.+. ++..+.++.+- ..++.++++|.+. +.. + +.++++..+
T Consensus 186 ~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~-----------~~~~~l~ivG~g~--~~~--~----~~~~~~~~~--- 242 (367)
T cd05844 186 RRPPRILFVGRFVEKKGPLL-LLEAFARLARR-----------VPEVRLVIIGDGP--LLA--A----LEALARALG--- 242 (367)
T ss_pred CCCcEEEEEEeeccccChHH-HHHHHHHHHHh-----------CCCeEEEEEeCch--HHH--H----HHHHHHHcC---
Confidence 34568899999999999999 98888776542 1258999999753 111 1 333333211
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCc----ccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceee
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAG----MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFL 574 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~----~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~ 574 (698)
+.+ +|.|+...+-+--..+++.||+++.||+.. .|++|++-+-||..|.+.|+|-.|...|+++.. .+|++
T Consensus 243 -~~~--~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~--~~g~~ 317 (367)
T cd05844 243 -LGG--RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDG--ETGLL 317 (367)
T ss_pred -CCC--eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecC--CeeEE
Confidence 234 788887776666677889999999999742 599999999999999999988777665544321 23333
Q ss_pred cccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHH
Q 005402 575 FGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 654 (698)
Q Consensus 575 fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~ 654 (698)
+.+.|.++|.++|. +
T Consensus 318 -------------------------------------~~~~d~~~l~~~i~-------------------------~--- 332 (367)
T cd05844 318 -------------------------------------VPEGDVAALAAALG-------------------------R--- 332 (367)
T ss_pred -------------------------------------ECCCCHHHHHHHHH-------------------------H---
Confidence 33334555555553 2
Q ss_pred HhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHH
Q 005402 655 AYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYAR 687 (698)
Q Consensus 655 ~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~ 687 (698)
+..|++.+.++..++.... ..|||++.+++|.+
T Consensus 333 l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 333 LLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 3457777887777765443 58999999998864
No 49
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.64 E-value=1.2e-07 Score=101.57 Aligned_cols=168 Identities=16% Similarity=0.117 Sum_probs=116.6
Q ss_pred CCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCC
Q 005402 420 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 499 (698)
Q Consensus 420 ~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~ 499 (698)
....++++.|+...|+.+. ++.++.++.+- ..++.++|.|.+...... ....+. ..
T Consensus 203 ~~~~i~~vgrl~~~K~~~~-li~a~~~l~~~-----------~~~~~l~i~G~g~~~~~~--------~~~~~~----~~ 258 (372)
T cd04949 203 KPHKIITVARLAPEKQLDQ-LIKAFAKVVKQ-----------VPDATLDIYGYGDEEEKL--------KELIEE----LG 258 (372)
T ss_pred CCCeEEEEEccCcccCHHH-HHHHHHHHHHh-----------CCCcEEEEEEeCchHHHH--------HHHHHH----cC
Confidence 3467889999999999999 99988887542 125789999988653321 111121 11
Q ss_pred CCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc-cchhhhhhccCcceeecccc
Q 005402 500 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG-ANVEIRQEVGEENFFLFGAR 578 (698)
Q Consensus 500 ~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG-w~vEi~~~~G~~N~~~fG~~ 578 (698)
.++ +|.|. +|...+ ..+++.||+++.||+ .|+.|++.+-||..|.+.|++-.| -..|+++.
T Consensus 259 ~~~--~v~~~-g~~~~~-~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~------------ 320 (372)
T cd04949 259 LED--YVFLK-GYTRDL-DEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIED------------ 320 (372)
T ss_pred Ccc--eEEEc-CCCCCH-HHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHccc------------
Confidence 334 45544 465544 567888999999999 899999999999999999977544 12222211
Q ss_pred hhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc
Q 005402 579 AHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 657 (698)
Q Consensus 579 ~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~ 657 (698)
-.+|+ +.+.|.++|.++|. .+..
T Consensus 321 ----------------------------~~~G~lv~~~d~~~la~~i~----------------------------~ll~ 344 (372)
T cd04949 321 ----------------------------GENGYLVPKGDIEALAEAII----------------------------ELLN 344 (372)
T ss_pred ----------------------------CCCceEeCCCcHHHHHHHHH----------------------------HHHc
Confidence 13444 33345666665553 3456
Q ss_pred CHHHHHHHHHHHhccCCCCChHHHHHHH
Q 005402 658 DQKRWTRMSIMNTAGSSKFSSDRTIQEY 685 (698)
Q Consensus 658 d~~~W~~~~~~~ma~~~~FS~drsi~eY 685 (698)
|++.|.++..++.+.+..|||++.+++|
T Consensus 345 ~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 345 DPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred CHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 8889999999998877899999998764
No 50
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.64 E-value=2.4e-07 Score=97.48 Aligned_cols=128 Identities=17% Similarity=0.171 Sum_probs=94.8
Q ss_pred HHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHH
Q 005402 409 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 488 (698)
Q Consensus 409 l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~ 488 (698)
++++++. .++.+.++++.|+..+|+++. ++..+..+.+. ..++++++.|.+.+.....+.+.+.+.
T Consensus 175 ~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~-li~~~~~l~~~-----------~~~~~l~ivG~~~~~~~~~~~~~~~~~ 240 (355)
T cd03819 175 LAREWPL--PKGKPVILLPGRLTRWKGQEV-FIEALARLKKD-----------DPDVHLLIVGDAQGRRFYYAELLELIK 240 (355)
T ss_pred HHHHcCC--CCCceEEEEeeccccccCHHH-HHHHHHHHHhc-----------CCCeEEEEEECCcccchHHHHHHHHHH
Confidence 5666664 466788999999999999999 98888776442 126899999998876555444444443
Q ss_pred HHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccC-CCcccCCCchhhHHHhcCceeeeeccccchhhh
Q 005402 489 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS-TAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 564 (698)
Q Consensus 489 ~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s-~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~ 564 (698)
+.. ..+ +|.|+.. ..+++ .++++||++++|| + .|..|++-+-||..|.+.|+|..|...|++
T Consensus 241 ~~~--------~~~--~v~~~g~-~~~~~-~~l~~ad~~i~ps~~--~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i 303 (355)
T cd03819 241 RLG--------LQD--RVTFVGH-CSDMP-AAYALADIVVSASTE--PEAFGRTAVEAQAMGRPVIASDHGGARETV 303 (355)
T ss_pred HcC--------Ccc--eEEEcCC-cccHH-HHHHhCCEEEecCCC--CCCCchHHHHHHhcCCCEEEcCCCCcHHHH
Confidence 332 223 5666554 33444 6678899999999 6 899999999999999999988777665554
No 51
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=98.63 E-value=4.2e-07 Score=103.77 Aligned_cols=178 Identities=16% Similarity=0.130 Sum_probs=121.9
Q ss_pred CceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 421 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 421 ~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
...++++.|+.+.||.+. ++.++.++.+- ..++++++.|.+... . .+.++++.. .+
T Consensus 319 ~~~il~vGrl~~~Kg~~~-li~A~~~l~~~-----------~p~~~l~i~G~G~~~----~----~l~~~i~~~----~l 374 (500)
T TIGR02918 319 PFSIITASRLAKEKHIDW-LVKAVVKAKKS-----------VPELTFDIYGEGGEK----Q----KLQKIINEN----QA 374 (500)
T ss_pred CeEEEEEeccccccCHHH-HHHHHHHHHhh-----------CCCeEEEEEECchhH----H----HHHHHHHHc----CC
Confidence 357889999999999999 99988877532 126889999987531 1 233443321 13
Q ss_pred CCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc-cchhhhhhccCcceeecccch
Q 005402 501 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG-ANVEIRQEVGEENFFLFGARA 579 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG-w~vEi~~~~G~~N~~~fG~~~ 579 (698)
.+ +|.|+. +. .++ .+++.||+++.||+ .|+.|++-|-||..|++.|+|.-| ...|+++. ++||+++....
T Consensus 375 ~~--~V~f~G-~~-~~~-~~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~--g~nG~lv~~~~ 445 (500)
T TIGR02918 375 QD--YIHLKG-HR-NLS-EVYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED--NKNGYLIPIDE 445 (500)
T ss_pred CC--eEEEcC-CC-CHH-HHHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccC--CCCEEEEeCCc
Confidence 34 566654 54 555 46899999999999 999999999999999999998754 56676654 36777764210
Q ss_pred hhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhcCH
Q 005402 580 HEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQ 659 (698)
Q Consensus 580 d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~d~ 659 (698)
++.|.+++.++|. +.+..++ ++
T Consensus 446 ---------------------------------~~~d~~~~~~~la------------------------~~I~~ll-~~ 467 (500)
T TIGR02918 446 ---------------------------------EEDDEDQIITALA------------------------EKIVEYF-NS 467 (500)
T ss_pred ---------------------------------cccchhHHHHHHH------------------------HHHHHHh-Ch
Confidence 0112233333332 1233344 45
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 660 KRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 660 ~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
+.+.+|..++...+..|||++.+++|.+.+
T Consensus 468 ~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll 497 (500)
T TIGR02918 468 NDIDAFHEYSYQIAEGFLTANIIEKWKKLV 497 (500)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 578888888877678999999999988654
No 52
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.62 E-value=1.6e-07 Score=105.39 Aligned_cols=172 Identities=15% Similarity=0.141 Sum_probs=115.9
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.++++++.|+..+|+.+. ++..+.++ .+++++|+|.+. +.. .+.++++ .
T Consensus 260 ~~~~~~i~~vGrl~~~K~~~~-li~a~~~~---------------~~~~l~ivG~G~--~~~------~l~~~~~---~- 311 (465)
T PLN02871 260 EPEKPLIVYVGRLGAEKNLDF-LKRVMERL---------------PGARLAFVGDGP--YRE------ELEKMFA---G- 311 (465)
T ss_pred CCCCeEEEEeCCCchhhhHHH-HHHHHHhC---------------CCcEEEEEeCCh--HHH------HHHHHhc---c-
Confidence 356789999999999999998 66554331 157899999753 221 1333332 1
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhc-cCcceeecc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV-GEENFFLFG 576 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~-G~~N~~~fG 576 (698)
. +|.|+---.-+-...++++||+++.||+ .|..|+.-+-||..|.+.|+|..|...|+++.. .++|||++
T Consensus 312 ----~--~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv- 382 (465)
T PLN02871 312 ----T--PTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY- 382 (465)
T ss_pred ----C--CeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe-
Confidence 1 4666432222445568899999999998 899999999999999999988877665655431 01333333
Q ss_pred cchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHh
Q 005402 577 ARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY 656 (698)
Q Consensus 577 ~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y 656 (698)
.+.|.+++.++|. .+.
T Consensus 383 ------------------------------------~~~d~~~la~~i~----------------------------~ll 398 (465)
T PLN02871 383 ------------------------------------TPGDVDDCVEKLE----------------------------TLL 398 (465)
T ss_pred ------------------------------------CCCCHHHHHHHHH----------------------------HHH
Confidence 3334555554443 344
Q ss_pred cCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 005402 657 CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 690 (698)
Q Consensus 657 ~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw 690 (698)
.|++.+.+|..++-.....|||+++++++.+.+|
T Consensus 399 ~~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y 432 (465)
T PLN02871 399 ADPELRERMGAAAREEVEKWDWRAATRKLRNEQY 432 (465)
T ss_pred hCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 5777777777766554468999999998877655
No 53
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.62 E-value=4.9e-07 Score=95.10 Aligned_cols=179 Identities=12% Similarity=0.020 Sum_probs=122.8
Q ss_pred HHHHhCCCCCCCCceeeeccccch--hhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHH
Q 005402 409 IKEKTGYSVSPDAMFDIQVKRIHE--YKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKF 486 (698)
Q Consensus 409 l~~~~g~~~~~~~~~~~~v~R~~~--yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~ 486 (698)
.++.++.+ ++..++.+..|... +|+.++ ++..+..+.+.. ..+.++++.|.+.+....
T Consensus 181 ~~~~~~~~--~~~~~i~~~~~~~~~~~K~~~~-ll~a~~~l~~~~----------~~~~~~~i~G~~~~~~~~------- 240 (365)
T cd03825 181 ARKRLGLP--ADKKIILFGAVGGTDPRKGFDE-LIEALKRLAERW----------KDDIELVVFGASDPEIPP------- 240 (365)
T ss_pred HHHHhCCC--CCCeEEEEEecCCCccccCHHH-HHHHHHHhhhcc----------CCCeEEEEeCCCchhhhc-------
Confidence 45566654 55566667777766 899999 888887654310 126899999998765431
Q ss_pred HHHHhhhhcCCCCCCCcceEEEEcCCC-HHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhh
Q 005402 487 ITDVGATVNHDPEIGDLLKVIFVPDYN-VSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQ 565 (698)
Q Consensus 487 i~~~a~~in~dp~~~~~lkvvf~~nY~-~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~ 565 (698)
. ... +|.|+...+ .+.-..+++.||+.++||+ .|+.|++-+-||..|.+.|++..|...|++.
T Consensus 241 -----~-------~~~--~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~ 304 (365)
T cd03825 241 -----D-------LPF--PVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPDIVD 304 (365)
T ss_pred -----c-------CCC--ceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHHHHHhcCCCEEEecCCCChhhee
Confidence 1 123 577777666 5666778899999999999 8999999999999999999887764444332
Q ss_pred hccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhH
Q 005402 566 EVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPS 644 (698)
Q Consensus 566 ~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~s 644 (698)
.. .+|+ +...+.+++.++|.
T Consensus 305 ~~----------------------------------------~~g~~~~~~~~~~~~~~l~------------------- 325 (365)
T cd03825 305 HG----------------------------------------VTGYLAKPGDPEDLAEGIE------------------- 325 (365)
T ss_pred CC----------------------------------------CceEEeCCCCHHHHHHHHH-------------------
Confidence 11 2233 23334555555554
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhc
Q 005402 645 YLECQEKVDEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 645 y~~aq~~a~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~iw~ 691 (698)
+ +..|++.+.++..++-+.. ..|||++++++|.+...+
T Consensus 326 ------~---l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 326 ------W---LLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred ------H---HHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 3 3357777777776665433 589999999999876543
No 54
>PLN02949 transferase, transferring glycosyl groups
Probab=98.61 E-value=4.9e-07 Score=102.25 Aligned_cols=121 Identities=14% Similarity=0.100 Sum_probs=88.5
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCC-ccCHHHHHHHHHHHHHhhhhcCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAF-ATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~-p~~~~~K~iIk~i~~~a~~in~d 497 (698)
++.+.+.++.||.+.|+.++ +++.+.++.+.. . .. ..+.+++++|.+. +.+..- .+.+.++++..
T Consensus 266 ~~~~~il~vGR~~~~Kg~~l-lI~A~~~l~~~~--~-~~----~~~~~LvIvG~~~~~~~~~~---~~eL~~la~~l--- 331 (463)
T PLN02949 266 EDPPYIISVAQFRPEKAHAL-QLEAFALALEKL--D-AD----VPRPKLQFVGSCRNKEDEER---LQKLKDRAKEL--- 331 (463)
T ss_pred CCCCEEEEEEeeeccCCHHH-HHHHHHHHHHhc--c-cc----CCCcEEEEEeCCCCcccHHH---HHHHHHHHHHc---
Confidence 34567889999999999999 999998876421 0 00 1257888888773 233322 22244444321
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 558 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG 558 (698)
.+.+ +|.|+.+-.-+--..+++.||+++.||+ .|.-|++-+-||..|+++|++..|
T Consensus 332 -~L~~--~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~g 387 (463)
T PLN02949 332 -GLDG--DVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSA 387 (463)
T ss_pred -CCCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCC
Confidence 2456 7999988776666778899999999999 999999999999999999988665
No 55
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.60 E-value=7.8e-07 Score=90.84 Aligned_cols=176 Identities=16% Similarity=0.135 Sum_probs=121.2
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.+.++++.|+...|+.+. ++..+..+.+. ...+++++.|.+. .... +....+..
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~-~i~~~~~~~~~-----------~~~~~l~i~G~~~-~~~~-------~~~~~~~~--- 252 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDL-LLEALAKLRKE-----------YPDVRLVIVGDGP-LREE-------LEALAAEL--- 252 (374)
T ss_pred cCCCeEEEEecchhhhcCHHH-HHHHHHHHhhh-----------cCCeEEEEEeCcH-HHHH-------HHHHHHHh---
Confidence 456789999999999999999 88887776432 1258999999332 1111 22222211
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 577 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~ 577 (698)
...+ +|.|....+-+-...++..||+.++|++ .|++|++-+-||..|.+.|+|..|+..|+++.. .++++
T Consensus 253 -~~~~--~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~--~~g~~--- 322 (374)
T cd03801 253 -GLGD--RVTFLGFVPDEDLPALYAAADVFVLPSL--YEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDG--ETGLL--- 322 (374)
T ss_pred -CCCc--ceEEEeccChhhHHHHHHhcCEEEecch--hccccchHHHHHHcCCcEEEeCCCChhHHhcCC--cceEE---
Confidence 1234 6888877766667778889999999999 699999999999999999988777665554321 22222
Q ss_pred chhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc
Q 005402 578 RAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 657 (698)
Q Consensus 578 ~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~ 657 (698)
+.+.+.+++.+.|. .+..
T Consensus 323 ----------------------------------~~~~~~~~l~~~i~----------------------------~~~~ 340 (374)
T cd03801 323 ----------------------------------VPPGDPEALAEAIL----------------------------RLLD 340 (374)
T ss_pred ----------------------------------eCCCCHHHHHHHHH----------------------------HHHc
Confidence 23334555555553 2356
Q ss_pred CHHHHHHHHHHHhcc-CCCCChHHHHHHHHHH
Q 005402 658 DQKRWTRMSIMNTAG-SSKFSSDRTIQEYARD 688 (698)
Q Consensus 658 d~~~W~~~~~~~ma~-~~~FS~drsi~eY~~~ 688 (698)
|++.+.++..++.+. ...|||++.+++|.+.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (374)
T cd03801 341 DPELRRRLGEAARERVAERFSWDRVAARTEEV 372 (374)
T ss_pred ChHHHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence 777777777776522 3699999999998764
No 56
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.58 E-value=9.7e-07 Score=104.28 Aligned_cols=127 Identities=16% Similarity=0.199 Sum_probs=93.4
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
..+.++++++.|+.++|++++ ++..+.++.+- ..+++++|.|.+. +.. . +.++++..+
T Consensus 514 ~~~~~vIg~VGRL~~~KG~~~-LI~A~a~l~~~-----------~p~~~LvIvG~G~--~~~--~----L~~l~~~lg-- 571 (694)
T PRK15179 514 SDARFTVGTVMRVDDNKRPFL-WVEAAQRFAAS-----------HPKVRFIMVGGGP--LLE--S----VREFAQRLG-- 571 (694)
T ss_pred CCCCeEEEEEEeCCccCCHHH-HHHHHHHHHHH-----------CcCeEEEEEccCc--chH--H----HHHHHHHcC--
Confidence 345788999999999999999 99988877542 1258999999874 221 1 334443211
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 576 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG 576 (698)
+.+ +|.| .+|--.+. .++++||+++.||+ +|..|.+-+-||..|.+.|+|..|...|+++.. +|||++.
T Consensus 572 --L~~--~V~f-lG~~~dv~-~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg--~~GlLv~ 640 (694)
T PRK15179 572 --MGE--RILF-TGLSRRVG-YWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEG--VTGLTLP 640 (694)
T ss_pred --CCC--cEEE-cCCcchHH-HHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccCC--CCEEEeC
Confidence 334 4554 55654544 67899999999999 999999999999999999999888777776542 5666654
No 57
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.58 E-value=6.9e-07 Score=92.91 Aligned_cols=168 Identities=15% Similarity=0.136 Sum_probs=121.8
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
++.+.+++++|+...|+.+. ++..+.++... .++++++.|.+.-. . . ++ .
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~-~i~~~~~l~~~------------~~~~l~i~G~~~~~-~-~---~~------~------ 244 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEA-LLDADLPLRRR------------PPVRLVIVGDGPAR-A-R---LE------A------ 244 (364)
T ss_pred CCCeEEEEEeccccccCHHH-HHHHHHHhhhc------------CCceEEEEeCCchH-H-H---Hh------c------
Confidence 45678899999999999999 88887775321 26799999975321 1 1 11 1
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccc
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGAR 578 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~ 578 (698)
..+ +|.|..-...+-...+++.||+.+.||+ .|..|++-+-||..|++.|++-.|...|+++..
T Consensus 245 -~~~--~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~----------- 308 (364)
T cd03814 245 -RYP--NVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTDG----------- 308 (364)
T ss_pred -cCC--cEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcCC-----------
Confidence 123 6777776677777889999999999999 899999999999999999988766554443221
Q ss_pred hhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc
Q 005402 579 AHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 657 (698)
Q Consensus 579 ~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~ 657 (698)
..|+ +.+.+.+++.+.|. .+..
T Consensus 309 -----------------------------~~g~~~~~~~~~~l~~~i~----------------------------~l~~ 331 (364)
T cd03814 309 -----------------------------ENGLLVEPGDAEAFAAALA----------------------------ALLA 331 (364)
T ss_pred -----------------------------cceEEcCCCCHHHHHHHHH----------------------------HHHc
Confidence 2343 33444555554443 3456
Q ss_pred CHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 658 DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 658 d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
|++.+.++..++......|||++.+++|.+.+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 332 DPELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred CHHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 88888888888876556899999999998754
No 58
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.56 E-value=6.3e-07 Score=92.93 Aligned_cols=129 Identities=18% Similarity=0.145 Sum_probs=97.1
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
+++.+.+++++|+..+|+.+. ++..+.++.+- ..++++++.|.+... +. +.++++..+
T Consensus 199 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~~~~-----------~~~~~l~i~G~~~~~----~~----~~~~~~~~~-- 256 (374)
T cd03817 199 PEDEPVLLYVGRLAKEKNIDF-LIRAFARLLKE-----------EPDVKLVIVGDGPER----EE----LEELARELG-- 256 (374)
T ss_pred CCCCeEEEEEeeeecccCHHH-HHHHHHHHHHh-----------CCCeEEEEEeCCchH----HH----HHHHHHHcC--
Confidence 456788999999999999999 88888776431 126899999987522 22 233332211
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 576 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG 576 (698)
..+ +|.|+...+-+-...+++.||+.++||+ .|..|++-+-||..|++.|+|..|+..|+++.. ++|+++.
T Consensus 257 --~~~--~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~--~~g~~~~ 327 (374)
T cd03817 257 --LAD--RVIFTGFVPREELPDYYKAADLFVFAST--TETQGLVLLEAMAAGLPVVAVDAPGLPDLVADG--ENGFLFP 327 (374)
T ss_pred --CCC--cEEEeccCChHHHHHHHHHcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCCCChhhheecC--ceeEEeC
Confidence 234 6888888777778889999999999999 899999999999999999999999877766442 3455553
No 59
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.55 E-value=5.9e-07 Score=93.13 Aligned_cols=171 Identities=13% Similarity=0.142 Sum_probs=119.2
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
.++.+.++++.|+..+|+.++ ++..+.++.+. .++++++.|.+..... +.+.... ..
T Consensus 217 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~l~~~------------~~~~l~i~G~~~~~~~--------~~~~~~~--~~ 273 (394)
T cd03794 217 LDDKFVVLYAGNIGRAQGLDT-LLEAAALLKDR------------PDIRFLIVGDGPEKEE--------LKELAKA--LG 273 (394)
T ss_pred CCCcEEEEEecCcccccCHHH-HHHHHHHHhhc------------CCeEEEEeCCcccHHH--------HHHHHHH--cC
Confidence 456789999999999999999 98888776432 2689999998764322 2221111 01
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCC-----CchhhHHHhcCceeeeeccccchhhhhhccCcce
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEAS-----GTSNMKFAMNGCILIGTLDGANVEIRQEVGEENF 572 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~Eas-----Gts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~ 572 (698)
. . +|.|+...+-+-...+++.||+.+.||+ .|.. +++-+-||..|++.|+|..|...|+....
T Consensus 274 --~-~--~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~----- 341 (394)
T cd03794 274 --L-D--NVTFLGRVPKEELPELLAAADVGLVPLK--PGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEA----- 341 (394)
T ss_pred --C-C--cEEEeCCCChHHHHHHHHhhCeeEEecc--CcccccccCchHHHHHHHCCCcEEEecCCCchhhhccC-----
Confidence 2 2 5888887777777888999999999999 6664 33358899999999988777554433221
Q ss_pred eecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHH
Q 005402 573 FLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEK 651 (698)
Q Consensus 573 ~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~ 651 (698)
.+|+ +.+.|.+++.+.|. +
T Consensus 342 -----------------------------------~~g~~~~~~~~~~l~~~i~-------------------------~ 361 (394)
T cd03794 342 -----------------------------------GAGLVVPPGDPEALAAAIL-------------------------E 361 (394)
T ss_pred -----------------------------------CcceEeCCCCHHHHHHHHH-------------------------H
Confidence 2343 33335666665554 3
Q ss_pred HHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 005402 652 VDEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYA 686 (698)
Q Consensus 652 a~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~ 686 (698)
+ ..|++.|.++..++.... ..|||++.+++|.
T Consensus 362 ~---~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 362 L---LDDPEERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred H---HhChHHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 3 368888888888776654 3899999999873
No 60
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.51 E-value=1.3e-06 Score=89.83 Aligned_cols=118 Identities=17% Similarity=0.089 Sum_probs=88.4
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
+.+.+.+++++|+...|+.+. ++..+.++.+. ..++++++.|.+.+... +.+..+..
T Consensus 199 ~~~~~~i~~~g~~~~~k~~~~-li~~~~~~~~~-----------~~~~~l~i~g~~~~~~~--------~~~~~~~~--- 255 (377)
T cd03798 199 PEDKKVILFVGRLVPRKGIDY-LIEALARLLKK-----------RPDVHLVIVGDGPLREA--------LEALAAEL--- 255 (377)
T ss_pred CCCceEEEEeccCccccCHHH-HHHHHHHHHhc-----------CCCeEEEEEcCCcchHH--------HHHHHHhc---
Confidence 356688999999999999999 98887776432 12689999998765322 22222211
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhh
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 563 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi 563 (698)
...+ +|.+....+-+-...++..||+.++||+ .|+.|++-+-||..|.+.|++..|...|.
T Consensus 256 -~~~~--~v~~~g~~~~~~~~~~~~~ad~~i~~~~--~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~ 316 (377)
T cd03798 256 -GLED--RVTFLGAVPHEEVPAYYAAADVFVLPSL--REGFGLVLLEAMACGLPVVATDVGGIPEI 316 (377)
T ss_pred -CCcc--eEEEeCCCCHHHHHHHHHhcCeeecchh--hccCChHHHHHHhcCCCEEEecCCChHHH
Confidence 1234 6777777776677788899999999999 79999999999999999998877654443
No 61
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.50 E-value=1e-06 Score=92.73 Aligned_cols=113 Identities=15% Similarity=0.101 Sum_probs=80.6
Q ss_pred ceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCC
Q 005402 422 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 501 (698)
Q Consensus 422 ~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~ 501 (698)
.+++++.|+.++|+.++ +++.+.++. .++++++.|.+.......+. +.+... ..
T Consensus 194 ~~i~~~G~~~~~Kg~~~-li~a~~~l~--------------~~~~l~ivG~~~~~~~~~~~----~~~~~~-------~~ 247 (363)
T cd04955 194 RYYLLVGRIVPENNIDD-LIEAFSKSN--------------SGKKLVIVGNADHNTPYGKL----LKEKAA-------AD 247 (363)
T ss_pred cEEEEEecccccCCHHH-HHHHHHhhc--------------cCceEEEEcCCCCcchHHHH----HHHHhC-------CC
Confidence 45779999999999999 887765431 15789999998654433322 221111 22
Q ss_pred CcceEEEEcCCCHHHHHhhccccccccccCCCcc-cCCCchhhHHHhcCceeeeeccccchhhh
Q 005402 502 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGM-EASGTSNMKFAMNGCILIGTLDGANVEIR 564 (698)
Q Consensus 502 ~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~-EasGts~Mka~~NG~l~ist~DGw~vEi~ 564 (698)
+ +|.|+.-..-+-....+..||+++.||. . |.+|++-+-||..|.+.|+|..|...|++
T Consensus 248 ~--~V~~~g~~~~~~~~~~~~~ad~~v~ps~--~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~ 307 (363)
T cd04955 248 P--RIIFVGPIYDQELLELLRYAALFYLHGH--SVGGTNPSLLEAMAYGCPVLASDNPFNREVL 307 (363)
T ss_pred C--cEEEccccChHHHHHHHHhCCEEEeCCc--cCCCCChHHHHHHHcCCCEEEecCCccceee
Confidence 4 6777655444444566677899999998 6 99999999999999999999888665544
No 62
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.50 E-value=1.5e-06 Score=90.00 Aligned_cols=169 Identities=14% Similarity=0.069 Sum_probs=120.9
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
..+.+.++++.|+..+|+.++ ++..+.++.+ .++++++.|.+...+...+.. .
T Consensus 188 ~~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~-------------~~~~l~i~G~~~~~~~~~~~~-------~------ 240 (359)
T cd03823 188 PGGRLRFGFIGQLTPHKGVDL-LLEAFKRLPR-------------GDIELVIVGNGLELEEESYEL-------E------ 240 (359)
T ss_pred CCCceEEEEEecCccccCHHH-HHHHHHHHHh-------------cCcEEEEEcCchhhhHHHHhh-------c------
Confidence 345678899999999999999 8888776543 167999999988776543211 1
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 577 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~ 577 (698)
... +|.|...++-+....+++.||+.++||+ ..|.+|++-+-||..|.+.|+|-.|...|+++..
T Consensus 241 --~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps~-~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~---------- 305 (359)
T cd03823 241 --GDP--RVEFLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELVRDG---------- 305 (359)
T ss_pred --CCC--eEEEeCCCCHHHHHHHHHhCCEEEEcCc-ccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCC----------
Confidence 123 6888888877788889999999999986 2499999999999999999988766444433221
Q ss_pred chhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHh
Q 005402 578 RAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY 656 (698)
Q Consensus 578 ~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y 656 (698)
..|+ |.+.|.+++.++|. + +.
T Consensus 306 ------------------------------~~g~~~~~~d~~~l~~~i~-------------------------~---l~ 327 (359)
T cd03823 306 ------------------------------VNGLLFPPGDAEDLAAALE-------------------------R---LI 327 (359)
T ss_pred ------------------------------CcEEEECCCCHHHHHHHHH-------------------------H---HH
Confidence 1233 34445556665554 3 34
Q ss_pred cCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 657 CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 657 ~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
.|++.|.++..++.. .++.+.++++|.+..
T Consensus 328 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 357 (359)
T cd03823 328 DDPDLLERLRAGIEP---PRSIEDQAEEYLKLY 357 (359)
T ss_pred hChHHHHHHHHhHHH---hhhHHHHHHHHHHHh
Confidence 588889888887765 445588888877643
No 63
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.47 E-value=2.8e-06 Score=93.27 Aligned_cols=184 Identities=9% Similarity=0.123 Sum_probs=121.6
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
.+++++|+ +++.++++++.|+.++|+++. ++..+.++.+ ..++++++.|.+. +... +
T Consensus 218 ~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~-li~a~~~l~~------------~~~~~l~ivG~g~--~~~~------l 274 (412)
T PRK10307 218 ALRAQLGL--PDGKKIVLYSGNIGEKQGLEL-VIDAARRLRD------------RPDLIFVICGQGG--GKAR------L 274 (412)
T ss_pred HHHHHcCC--CCCCEEEEEcCccccccCHHH-HHHHHHHhcc------------CCCeEEEEECCCh--hHHH------H
Confidence 35666775 456789999999999999999 8888766421 1258999999864 2211 3
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCch----hhHHHhcCceeeeeccccchhh
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTS----NMKFAMNGCILIGTLDGANVEI 563 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts----~Mka~~NG~l~ist~DGw~vEi 563 (698)
.++++..+ + + +|.|+.-...+-...++++||+.+.||+ .|+.|.. -.-||..|.+.|+|..|-.
T Consensus 275 ~~~~~~~~----l-~--~v~f~G~~~~~~~~~~~~~aDi~v~ps~--~e~~~~~~p~kl~eama~G~PVi~s~~~g~--- 342 (412)
T PRK10307 275 EKMAQCRG----L-P--NVHFLPLQPYDRLPALLKMADCHLLPQK--AGAADLVLPSKLTNMLASGRNVVATAEPGT--- 342 (412)
T ss_pred HHHHHHcC----C-C--ceEEeCCCCHHHHHHHHHhcCEeEEeec--cCcccccCcHHHHHHHHcCCCEEEEeCCCc---
Confidence 33333211 2 2 5777755566777788999999999999 6876643 2457899999998865410
Q ss_pred hhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCCh
Q 005402 564 RQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDF 642 (698)
Q Consensus 564 ~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df 642 (698)
+. .++ ++ .+|+ +.+.|.++|.++|.
T Consensus 343 -------------~~-~~~---------------------i~--~~G~~~~~~d~~~la~~i~----------------- 368 (412)
T PRK10307 343 -------------EL-GQL---------------------VE--GIGVCVEPESVEALVAAIA----------------- 368 (412)
T ss_pred -------------hH-HHH---------------------Hh--CCcEEeCCCCHHHHHHHHH-----------------
Confidence 01 111 11 3455 44456666665554
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhc
Q 005402 643 PSYLECQEKVDEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 643 ~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~iw~ 691 (698)
+ +..|++...+|..++-... ..|||++++++|.+.+=+
T Consensus 369 --------~---l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 369 --------A---LARQALLRPKLGTVAREYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred --------H---HHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 2 3356666667766665543 589999999999887643
No 64
>PHA01630 putative group 1 glycosyl transferase
Probab=98.46 E-value=1.4e-06 Score=94.33 Aligned_cols=186 Identities=8% Similarity=-0.004 Sum_probs=118.2
Q ss_pred CceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 421 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 421 ~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
.+++++++|+.++|+.++ ++..+.++.+- ..+.++++.|.+. ... + +.. +
T Consensus 142 ~~vl~~~g~~~~~Kg~d~-Li~A~~~l~~~-----------~~~~~llivG~~~-~~~---~----l~~----------~ 191 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDI-VVKIFHELQNE-----------GYDFYFLIKSSNM-LDP---R----LFG----------L 191 (331)
T ss_pred CEEEEEeccccccCCHHH-HHHHHHHHHhh-----------CCCEEEEEEeCcc-cch---h----hcc----------c
Confidence 457788999999999999 99988776431 1267888888432 111 0 100 1
Q ss_pred CCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchh
Q 005402 501 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAH 580 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d 580 (698)
.+ ...++ .-+--..++++||+++.||+ .|+-|+.-+-||..|++.|+|..|.+.|++.. ++||+++....
T Consensus 192 ~~--~~~~v---~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~--~~ng~lv~~~~- 261 (331)
T PHA01630 192 NG--VKTPL---PDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLS--NLDVYWIKSGR- 261 (331)
T ss_pred cc--eeccC---CHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccC--CCceEEeeecc-
Confidence 12 11122 22344667899999999999 89999999999999999999999988887754 37888775321
Q ss_pred hhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhcCHH
Q 005402 581 EIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK 660 (698)
Q Consensus 581 ~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~d~~ 660 (698)
.+. + +..++ ...|++.+.+.+++++.+. ++.... +++
T Consensus 262 ~~~-~--------~~~~~--------~~~G~~v~~~~~~~~~~ii-------------------------~~l~~~-~~~ 298 (331)
T PHA01630 262 KPK-L--------WYTNP--------IHVGYFLDPDIEDAYQKLL-------------------------EALANW-TPE 298 (331)
T ss_pred ccc-c--------cccCC--------cccccccCCCHHHHHHHHH-------------------------HHHhCC-CHH
Confidence 010 0 00001 2345544445566665553 222211 135
Q ss_pred HHHHHHHHHhc-cCCCCChHHHHHHHHHHH
Q 005402 661 RWTRMSIMNTA-GSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 661 ~W~~~~~~~ma-~~~~FS~drsi~eY~~~i 689 (698)
++.+++.++-. .+..|||++++++|.+.+
T Consensus 299 ~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~ 328 (331)
T PHA01630 299 KKKENLEGRAILYRENYSYNAIAKMWEKIL 328 (331)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 55655555422 236999999999998754
No 65
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.45 E-value=6e-07 Score=87.09 Aligned_cols=120 Identities=18% Similarity=0.092 Sum_probs=95.5
Q ss_pred eccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcce
Q 005402 426 QVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLK 505 (698)
Q Consensus 426 ~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~lk 505 (698)
++.|+..+|+.++ ++..+.++.+. ..+++++|.|++.+.+...+. +.... ..+ +
T Consensus 109 ~~g~~~~~k~~~~-~~~a~~~l~~~-----------~~~~~~~i~G~~~~~~~~~~~----~~~~~--------~~~--~ 162 (229)
T cd01635 109 FVGRLAPEKGLDD-LIEAFALLKER-----------GPDLKLVIAGDGPEREYLEEL----LAALL--------LLD--R 162 (229)
T ss_pred EEEeecccCCHHH-HHHHHHHHHHh-----------CCCeEEEEEeCCCChHHHHHH----HHhcC--------Ccc--c
Confidence 8899999999999 98888887542 126899999999987765532 11111 234 7
Q ss_pred EEEEcCC-CHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeec
Q 005402 506 VIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 575 (698)
Q Consensus 506 vvf~~nY-~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~f 575 (698)
|.++..+ ..+....+.++||+.+.||+ .|++|++-+-||..|.+.|+|.+|++.|+++.. ++||+|
T Consensus 163 v~~~~~~~~~~~~~~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~--~~g~~~ 229 (229)
T cd01635 163 VIFLGGLDPEELLALLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVGGPPEIVEDG--LTGLLV 229 (229)
T ss_pred EEEeCCCCcHHHHHHHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCCCcceEEECC--CceEEC
Confidence 8888887 67788888889999999999 899999999999999999999999998876543 567664
No 66
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.42 E-value=3.8e-06 Score=88.24 Aligned_cols=124 Identities=16% Similarity=0.168 Sum_probs=88.8
Q ss_pred HHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHH
Q 005402 409 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 488 (698)
Q Consensus 409 l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~ 488 (698)
++++++. .++.+++.++.|+...|+.++ ++..+.++.+. ..+++|+|.|.+.-. +.+.+.+.
T Consensus 178 ~~~~~~~--~~~~~~~l~~g~~~~~kg~~~-li~a~~~l~~~-----------~~~~~l~i~G~g~~~----~~~~~~~~ 239 (360)
T cd04951 178 IRNALGV--KNDTFVILAVGRLVEAKDYPN-LLKAFAKLLSD-----------YLDIKLLIAGDGPLR----ATLERLIK 239 (360)
T ss_pred HHHHcCc--CCCCEEEEEEeeCchhcCcHH-HHHHHHHHHhh-----------CCCeEEEEEcCCCcH----HHHHHHHH
Confidence 5566665 467789999999999999999 98888776432 125899999975422 22333332
Q ss_pred HHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhh
Q 005402 489 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 564 (698)
Q Consensus 489 ~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~ 564 (698)
++. ..+ +|.|+. +-.. ...++++||+++.||+ .|..|.+-+-||..|.+.|++..|...|++
T Consensus 240 ~~~--------~~~--~v~~~g-~~~~-~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i 301 (360)
T cd04951 240 ALG--------LSN--RVKLLG-LRDD-IAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVV 301 (360)
T ss_pred hcC--------CCC--cEEEec-cccc-HHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEe
Confidence 221 223 566664 3223 3467899999999999 899999999999999999988776555544
No 67
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.40 E-value=3.5e-06 Score=87.92 Aligned_cols=124 Identities=14% Similarity=0.026 Sum_probs=88.1
Q ss_pred CCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCC
Q 005402 420 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 499 (698)
Q Consensus 420 ~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~ 499 (698)
....++++.|+.+.||+++ ++....+ .++++++.|.+....... +.+.+...
T Consensus 170 ~~~~i~~~Gr~~~~Kg~~~-li~~~~~----------------~~~~l~i~G~~~~~~~~~----~~~~~~~~------- 221 (335)
T cd03802 170 KGDYLLFLGRISPEKGPHL-AIRAARR----------------AGIPLKLAGPVSDPDYFY----REIAPELL------- 221 (335)
T ss_pred CCCEEEEEEeeccccCHHH-HHHHHHh----------------cCCeEEEEeCCCCHHHHH----HHHHHhcc-------
Confidence 4567899999999999999 7765322 156899999986543322 11111110
Q ss_pred CCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecc
Q 005402 500 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 576 (698)
Q Consensus 500 ~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG 576 (698)
..+ +|.|...-+-.-...+++++|++++||+ ..|.+|++-+-||..|.+.|+|..|...|+++.. .|||++.
T Consensus 222 ~~~--~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~--~~g~l~~ 293 (335)
T cd03802 222 DGP--DIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDG--VTGFLVD 293 (335)
T ss_pred cCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeCC--CcEEEeC
Confidence 224 6888876665556678899999999997 2399999999999999999999888777766432 3555554
No 68
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.33 E-value=6.9e-06 Score=83.84 Aligned_cols=127 Identities=17% Similarity=0.095 Sum_probs=90.1
Q ss_pred CCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcC
Q 005402 417 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 496 (698)
Q Consensus 417 ~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~ 496 (698)
..++.+.++++.|+.+.|+.++ ++..+.++.+. ..++++++.|.+....+ +.+..+..+
T Consensus 185 ~~~~~~~i~~~g~~~~~k~~~~-~i~~~~~l~~~-----------~~~~~l~i~G~~~~~~~--------~~~~~~~~~- 243 (353)
T cd03811 185 IPPDGPVILAVGRLSPQKGFDT-LIRAFALLRKE-----------GPDARLVILGDGPLREE--------LEALAKELG- 243 (353)
T ss_pred CCCCceEEEEEecchhhcChHH-HHHHHHHhhhc-----------CCCceEEEEcCCccHHH--------HHHHHHhcC-
Confidence 3466789999999999999999 88887776432 12689999998764332 112222111
Q ss_pred CCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeec
Q 005402 497 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 575 (698)
Q Consensus 497 dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~f 575 (698)
..+ +|.|....+ . ...++..||+++.||+ .|..|++-+-||..|.+.|+|..|...|+++.. .+|+++
T Consensus 244 ---~~~--~v~~~g~~~-~-~~~~~~~~d~~i~ps~--~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~--~~g~~~ 311 (353)
T cd03811 244 ---LAD--RVHFLGFQS-N-PYPYLKAADLFVLSSR--YEGFPNVLLEAMALGTPVVATDCPGPREILEDG--ENGLLV 311 (353)
T ss_pred ---CCc--cEEEecccC-C-HHHHHHhCCEEEeCcc--cCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCC--CceEEE
Confidence 233 566655433 3 4568999999999999 899999999999999999999888666655432 344444
No 69
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=98.32 E-value=6.2e-06 Score=91.84 Aligned_cols=129 Identities=14% Similarity=0.090 Sum_probs=93.0
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
++.+.++++.||...|+.++ +++.+..+.+.. +... ..+++++++|.+...+.. ...+.+.++++..+
T Consensus 235 ~~~~~il~vgr~~~~K~~~~-li~A~~~l~~~~---~~~~---~~~~~lvivG~~~~~~~~--~~~~~L~~~~~~l~--- 302 (419)
T cd03806 235 TRENQILSIAQFRPEKNHPL-QLRAFAKLLKRL---PEEI---KEKIKLVLIGSCRNEDDE--KRVEDLKLLAKELG--- 302 (419)
T ss_pred cCCcEEEEEEeecCCCCHHH-HHHHHHHHHHhC---cccc---cCceEEEEEcCCCCcccH--HHHHHHHHHHHHhC---
Confidence 45678999999999999999 999988876431 1100 024789999987543321 12233444444221
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc-cchhhh
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG-ANVEIR 564 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG-w~vEi~ 564 (698)
+.+ +|.|+..-+-+.-..+++.||+++.||. .|+-|.+-.-||..|+++|++..| ...|++
T Consensus 303 -l~~--~V~f~g~v~~~~l~~~l~~adv~v~~s~--~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv 364 (419)
T cd03806 303 -LED--KVEFVVNAPFEELLEELSTASIGLHTMW--NEHFGIGVVEYMAAGLIPLAHASGGPLLDIV 364 (419)
T ss_pred -CCC--eEEEecCCCHHHHHHHHHhCeEEEECCc--cCCcccHHHHHHHcCCcEEEEcCCCCchhee
Confidence 456 8999987766666788899999999999 799999999999999999988764 333444
No 70
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.27 E-value=1.1e-05 Score=89.40 Aligned_cols=175 Identities=18% Similarity=0.173 Sum_probs=115.9
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
.+.+.+++++|+.+.||.+. ++..+.++.+. .| ...+.+++.|.+... . . +.++++. .+
T Consensus 228 ~~~~~il~~Grl~~~Kg~~~-li~a~~~l~~~---~p------~~~l~~~iiG~g~~~-~---~----l~~~~~~---~~ 286 (407)
T cd04946 228 DDTLRIVSCSYLVPVKRVDL-IIKALAALAKA---RP------SIKIKWTHIGGGPLE-D---T----LKELAES---KP 286 (407)
T ss_pred CCCEEEEEeeccccccCHHH-HHHHHHHHHHh---CC------CceEEEEEEeCchHH-H---H----HHHHHHh---cC
Confidence 34578899999999999999 99988887542 11 124677788876532 1 1 3333321 11
Q ss_pred CCCCcceEEEEcCCC-HHHHHhhc-cccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecc
Q 005402 499 EIGDLLKVIFVPDYN-VSVAELLI-PASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 576 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~-~~lA~~i~-~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG 576 (698)
..+ +|.|.--.+ .++...+- +.+|++.+||. .|.-|++-|-||..|.+.|+|..|...|++++. +||+++
T Consensus 287 -~~~--~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~--~~G~l~- 358 (407)
T cd04946 287 -ENI--SVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNG--GNGLLL- 358 (407)
T ss_pred -CCc--eEEEecCCChHHHHHHHhhcCCCEEEeCCc--cccccHHHHHHHHcCCCEEeCCCCCcHHHhcCC--CcEEEe-
Confidence 123 676654443 34555544 45899999999 999999999999999999988877665555332 233333
Q ss_pred cchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCC-CHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHH
Q 005402 577 ARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSY-NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEA 655 (698)
Q Consensus 577 ~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~-~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~ 655 (698)
.+. +.+++.++|. ++
T Consensus 359 ------------------------------------~~~~~~~~la~~I~-------------------------~l--- 374 (407)
T cd04946 359 ------------------------------------SKDPTPNELVSSLS-------------------------KF--- 374 (407)
T ss_pred ------------------------------------CCCCCHHHHHHHHH-------------------------HH---
Confidence 222 3555555554 32
Q ss_pred hcCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 005402 656 YCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYA 686 (698)
Q Consensus 656 Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~ 686 (698)
..|++.+.+|..++-... ..|||+...++|+
T Consensus 375 l~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 375 IDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 347888888877776643 6999999998876
No 71
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.27 E-value=3.5e-06 Score=88.75 Aligned_cols=120 Identities=18% Similarity=0.070 Sum_probs=89.2
Q ss_pred CCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcC
Q 005402 417 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 496 (698)
Q Consensus 417 ~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~ 496 (698)
..++.+.++++.|+..+|+.++ ++..+.++.+. ..+++++|.|.+..... +.+.++..+
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~-li~a~~~l~~~-----------~~~~~l~ivG~g~~~~~--------~~~~~~~~~- 246 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEF-LIEIFAELLKK-----------NPNAKLLLVGDGELEEE--------IKKKVKELG- 246 (358)
T ss_pred CCCCCEEEEEEeccccccChHH-HHHHHHHHHHh-----------CCCeEEEEEeCCchHHH--------HHHHHHhcC-
Confidence 3467889999999999999999 99988887542 12689999998763211 333332211
Q ss_pred CCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhh
Q 005402 497 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 566 (698)
Q Consensus 497 dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~ 566 (698)
..+ +|.|+ ++..++ ..++..||+.++||+ .|++|++-+-||..|++.|+|..|...|+++.
T Consensus 247 ---~~~--~v~~~-g~~~~~-~~~~~~adi~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~ 307 (358)
T cd03812 247 ---LED--KVIFL-GVRNDV-PELLQAMDVFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEVDLTD 307 (358)
T ss_pred ---CCC--cEEEe-cccCCH-HHHHHhcCEEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc
Confidence 334 56665 444444 457899999999999 89999999999999999999988866665544
No 72
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.23 E-value=3.9e-06 Score=89.41 Aligned_cols=107 Identities=15% Similarity=0.138 Sum_probs=84.2
Q ss_pred CceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 421 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 421 ~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
..++.++.|+..+|+++. ++..+.++ |++++|.|.+.... -++ + . .
T Consensus 195 ~~~il~~G~~~~~K~~~~-li~a~~~~----------------~~~l~ivG~g~~~~-----~l~---~--~-------~ 240 (351)
T cd03804 195 EDYYLSVGRLVPYKRIDL-AIEAFNKL----------------GKRLVVIGDGPELD-----RLR---A--K-------A 240 (351)
T ss_pred CCEEEEEEcCccccChHH-HHHHHHHC----------------CCcEEEEECChhHH-----HHH---h--h-------c
Confidence 456889999999999999 87776442 46799999875321 111 1 1 1
Q ss_pred CCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhh
Q 005402 501 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 566 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~ 566 (698)
.+ +|.|+..-+-+-...++++||+++.||+ |..|++-+-||..|.+.|+|..|...|++++
T Consensus 241 ~~--~V~~~g~~~~~~~~~~~~~ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~ 301 (351)
T cd03804 241 GP--NVTFLGRVSDEELRDLYARARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVID 301 (351)
T ss_pred CC--CEEEecCCCHHHHHHHHHhCCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceeeC
Confidence 24 7999988888888999999999999987 9999999999999999999988877665543
No 73
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.21 E-value=0.00026 Score=84.58 Aligned_cols=130 Identities=11% Similarity=0.063 Sum_probs=86.4
Q ss_pred CCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCc-cCHHHHHHHHHHHHHhhhhcCCC
Q 005402 420 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA-TYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 420 ~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p-~~~~~K~iIk~i~~~a~~in~dp 498 (698)
+..++..|.|++..|+... ++..++++++- .|..+ ..+++|+.|.+.. +...-.++-+.+.+++..||..=
T Consensus 264 ~~~~il~VgRl~~~Kgi~~-~l~A~~~ll~~---~p~~~----~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~ 335 (726)
T PRK14501 264 GRKIILSIDRLDYTKGIPR-RLLAFERFLEK---NPEWR----GKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEF 335 (726)
T ss_pred CCEEEEEecCcccccCHHH-HHHHHHHHHHh---Ccccc----CCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhc
Confidence 5578999999999999999 99999998653 33221 2467776653321 11333455566767766666320
Q ss_pred CCCCcceEEEEcC-CCHHHHHhhccccccccccCCCcccCCCchhhHHHhc-----Cceeeeecccc
Q 005402 499 EIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMN-----GCILIGTLDGA 559 (698)
Q Consensus 499 ~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~N-----G~l~ist~DGw 559 (698)
...+...|+++.+ .+-+---.++++||+++.||. .|.=|+.-+-||.- |++.+|+..|.
T Consensus 336 ~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~ 400 (726)
T PRK14501 336 GTVDWTPIHYFYRSLPFEELVALYRAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGA 400 (726)
T ss_pred CCCCcceEEEEeCCCCHHHHHHHHHhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccch
Confidence 0011123555544 455555678999999999999 89989988888887 56777666553
No 74
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=98.17 E-value=0.00041 Score=83.68 Aligned_cols=129 Identities=7% Similarity=-0.047 Sum_probs=81.7
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEE-EecCCccCHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIF-GGKAFATYVQAKRIVKF 486 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If-~Gka~p~~~~~K~iIk~ 486 (698)
.+++.++ +..++..+.|++.-|+..+ +|..++++++- .|.-+ ..+.+|. +|........-.++-+.
T Consensus 271 ~lr~~~~-----~~~lIl~VgRLd~~KGi~~-lL~Afe~lL~~---~P~~~----~kvvLvqia~psr~~~~~y~~l~~~ 337 (797)
T PLN03063 271 ELKRFFA-----GRKVILGVDRLDMIKGIPQ-KYLAFEKFLEE---NPEWR----DKVMLVQIAVPTRNDVPEYQKLKSQ 337 (797)
T ss_pred HHHHhcC-----CCeEEEEecccccccCHHH-HHHHHHHHHHh---Ccccc----CcEEEEEEecCCCCchHHHHHHHHH
Confidence 4555543 3568889999999999999 99999998653 33221 1355553 33221112222345566
Q ss_pred HHHHhhhhcCCCCCCCcceEEEEcC-CCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCce
Q 005402 487 ITDVGATVNHDPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCI 551 (698)
Q Consensus 487 i~~~a~~in~dp~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l 551 (698)
+.++...||..=...+..-|.++.+ .+-+--..+|++||+++.||. .|.=|+.-+-||.-|..
T Consensus 338 v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSl--rEGmnLv~lEamA~g~p 401 (797)
T PLN03063 338 VHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSL--RDGMNLVSYEFVACQKA 401 (797)
T ss_pred HHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCcc--ccccCcchhhHheeecC
Confidence 6666655653200011123555543 344444568899999999999 99999999999988863
No 75
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.02 E-value=6.9e-05 Score=82.08 Aligned_cols=171 Identities=5% Similarity=-0.002 Sum_probs=108.0
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHH-HHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYK-KMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 496 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~-~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~ 496 (698)
.++.++++++.|+..+|+.+. ++..+.+.. .+++ ...++++++.|.+... .+.+++.
T Consensus 221 ~~~~~~ilf~G~l~~~k~~~~-l~~~~~~~~~~l~~--------~~p~~~l~ivG~g~~~---------~~~~l~~---- 278 (397)
T TIGR03087 221 PPGKRVLVFTGAMDYWPNIDA-VVWFAERVFPAVRA--------RRPAAEFYIVGAKPSP---------AVRALAA---- 278 (397)
T ss_pred CCCCcEEEEEEecCCccCHHH-HHHHHHHHHHHHHH--------HCCCcEEEEECCCChH---------HHHHhcc----
Confidence 345678999999999999998 775554433 2321 0125899999987531 1333332
Q ss_pred CCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecc
Q 005402 497 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 576 (698)
Q Consensus 497 dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG 576 (698)
. . +|.|...-+ ++ ..++++||+++.||+. .|..|+.-+-||..|.+.|+|..|.. +.... .
T Consensus 279 ~----~--~V~~~G~v~-~~-~~~~~~adv~v~Ps~~-~eG~~~~~lEAma~G~PVV~t~~~~~--~i~~~-~------- 339 (397)
T TIGR03087 279 L----P--GVTVTGSVA-DV-RPYLAHAAVAVAPLRI-ARGIQNKVLEAMAMAKPVVASPEAAE--GIDAL-P------- 339 (397)
T ss_pred C----C--CeEEeeecC-CH-HHHHHhCCEEEecccc-cCCcccHHHHHHHcCCCEEecCcccc--ccccc-C-------
Confidence 1 1 355543322 34 4578999999999972 26666678999999999998865421 11000 0
Q ss_pred cchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHh
Q 005402 577 ARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY 656 (698)
Q Consensus 577 ~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y 656 (698)
+.|.+-+.|.+++.++|. .+.
T Consensus 340 -------------------------------~~g~lv~~~~~~la~ai~----------------------------~ll 360 (397)
T TIGR03087 340 -------------------------------GAELLVAADPADFAAAIL----------------------------ALL 360 (397)
T ss_pred -------------------------------CcceEeCCCHHHHHHHHH----------------------------HHH
Confidence 122211234455554443 345
Q ss_pred cCHHHHHHHHHHHhccC-CCCChHHHHHHHHHH
Q 005402 657 CDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARD 688 (698)
Q Consensus 657 ~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~ 688 (698)
.|++.+.+|..++-... ..|||++++++|.+.
T Consensus 361 ~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~ 393 (397)
T TIGR03087 361 ANPAEREELGQAARRRVLQHYHWPRNLARLDAL 393 (397)
T ss_pred cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 68888888888876543 589999999998654
No 76
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.96 E-value=6e-05 Score=85.44 Aligned_cols=120 Identities=14% Similarity=0.070 Sum_probs=88.0
Q ss_pred CceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 421 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 421 ~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
.+...++.|++..|+.+. +++.+.++.+- ..++.+++.|.|.-..+ +.+.++..+
T Consensus 228 ~~~~l~vGRL~~eK~~~~-Li~a~~~l~~~-----------~~~~~l~ivGdGp~~~~--------L~~~a~~l~----- 282 (462)
T PLN02846 228 TKGAYYIGKMVWSKGYKE-LLKLLHKHQKE-----------LSGLEVDLYGSGEDSDE--------VKAAAEKLE----- 282 (462)
T ss_pred ceEEEEEecCcccCCHHH-HHHHHHHHHhh-----------CCCeEEEEECCCccHHH--------HHHHHHhcC-----
Confidence 345789999999999999 99887776432 12578999999953322 555554211
Q ss_pred CCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeec
Q 005402 501 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 575 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~f 575 (698)
+.+.|+.++. ..+.+++++||+++||+ .|.-|+.-+-||..|.+-|++..|.+ |++.. +.|++.+
T Consensus 283 ---l~~~vf~G~~--~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~-~~v~~--~~ng~~~ 347 (462)
T PLN02846 283 ---LDVRVYPGRD--HADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN-EFFKQ--FPNCRTY 347 (462)
T ss_pred ---CcEEEECCCC--CHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc-ceeec--CCceEec
Confidence 1344577764 34569999999999999 99999999999999999999988753 65544 2455555
No 77
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.94 E-value=0.00016 Score=80.37 Aligned_cols=135 Identities=15% Similarity=0.146 Sum_probs=91.1
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
++..+++.+.|+.+.|+.+. ++.++.++.+... ... ...++.++|.|.|. .. ..+.+++.++.
T Consensus 230 ~~~~vi~~~grl~~~K~~~~-li~A~~~l~~~~~-~~~----~~~~i~l~ivG~G~--~~--~~l~~~~~~~~------- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGI-LLDALVAYEKSAA-TGP----KLPKLLCIITGKGP--LK--EKYLERIKELK------- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHH-HHHHHHHHHHhhc-ccc----cCCCEEEEEEecCc--cH--HHHHHHHHHcC-------
Confidence 34456777899999999999 9999988764210 000 01248999999874 22 22233332221
Q ss_pred CCCCcceEEEEcCC-CHHHHHhhccccccccccCCCc-ccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecc
Q 005402 499 EIGDLLKVIFVPDY-NVSVAELLIPASELSQHISTAG-MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 576 (698)
Q Consensus 499 ~~~~~lkvvf~~nY-~~~lA~~i~~g~Dv~l~~s~~~-~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG 576 (698)
+. .++|+.+| .-+-...++++||+++.++..+ .|.-++.-+-||.-|.+.|+|..|...|++++. +|||+++
T Consensus 293 -l~---~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~--~~G~lv~ 366 (415)
T cd03816 293 -LK---KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHG--ENGLVFG 366 (415)
T ss_pred -CC---cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCC--CCEEEEC
Confidence 22 48888775 5566667999999998543321 356677789999999999999888777877653 5777774
No 78
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=97.81 E-value=0.00017 Score=78.41 Aligned_cols=117 Identities=15% Similarity=0.076 Sum_probs=95.7
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
.+...++.++|+.--||.|| ++.++.+..+- ...+.|||+|-|-..+. +.++-++.+
T Consensus 193 ~~i~~ivv~sRLvyrKGiDl-l~~iIp~vc~~-----------~p~vrfii~GDGPk~i~--------lee~lEk~~--- 249 (426)
T KOG1111|consen 193 ADIITIVVASRLVYRKGIDL-LLEIIPSVCDK-----------HPEVRFIIIGDGPKRID--------LEEMLEKLF--- 249 (426)
T ss_pred CCeeEEEEEeeeeeccchHH-HHHHHHHHHhc-----------CCCeeEEEecCCcccch--------HHHHHHHhh---
Confidence 34479999999999999999 99999998653 12689999999987776 334444321
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhh
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 563 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi 563 (698)
..+ ||.++-.-.=+--+.++.-.|++||+|. .||=|+.-.-||--|-+.+||+-|=-.|+
T Consensus 250 -l~~--rV~~lG~v~h~~Vr~vl~~G~IFlntSl--TEafc~~ivEAaScGL~VVsTrVGGIpeV 309 (426)
T KOG1111|consen 250 -LQD--RVVMLGTVPHDRVRDVLVRGDIFLNTSL--TEAFCMVIVEAASCGLPVVSTRVGGIPEV 309 (426)
T ss_pred -ccC--ceEEecccchHHHHHHHhcCcEEeccHH--HHHHHHHHHHHHhCCCEEEEeecCCcccc
Confidence 456 8999888887888888888999999999 99999999999999999999998844443
No 79
>PRK10125 putative glycosyl transferase; Provisional
Probab=97.71 E-value=0.00029 Score=78.49 Aligned_cols=113 Identities=11% Similarity=-0.126 Sum_probs=76.4
Q ss_pred CCCceeeeccccch--hhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcC
Q 005402 419 PDAMFDIQVKRIHE--YKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 496 (698)
Q Consensus 419 ~~~~~~~~v~R~~~--yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~ 496 (698)
++.+.++++.|+.. .|+.+. ++..+.++ . .++++++.|++.|...
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~-li~A~~~l---~-----------~~~~L~ivG~g~~~~~------------------ 285 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQ-LVREMMAL---G-----------DKIELHTFGKFSPFTA------------------ 285 (405)
T ss_pred CCCCEEEEEEeccccCCccHHH-HHHHHHhC---C-----------CCeEEEEEcCCCcccc------------------
Confidence 45677888888544 455666 65555442 1 1578999998765321
Q ss_pred CCCCCCcceEEEEc-CCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeec
Q 005402 497 DPEIGDLLKVIFVP-DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 575 (698)
Q Consensus 497 dp~~~~~lkvvf~~-nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~f 575 (698)
. +|.++. -.+..--..++++||++++||+ .|+-|+.-+-||..|++.|+|.-|...|++.. .|||++
T Consensus 286 -----~--~v~~~g~~~~~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~---~~G~lv 353 (405)
T PRK10125 286 -----G--NVVNHGFETDKRKLMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQK---SGGKTV 353 (405)
T ss_pred -----c--ceEEecCcCCHHHHHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEeC---CcEEEE
Confidence 1 122221 0133334467899999999999 99999999999999999999988876666532 255555
Q ss_pred c
Q 005402 576 G 576 (698)
Q Consensus 576 G 576 (698)
.
T Consensus 354 ~ 354 (405)
T PRK10125 354 S 354 (405)
T ss_pred C
Confidence 3
No 80
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.69 E-value=0.00028 Score=76.26 Aligned_cols=114 Identities=11% Similarity=0.001 Sum_probs=77.4
Q ss_pred CCceeeeccccch--hhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 420 DAMFDIQVKRIHE--YKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 420 ~~~~~~~v~R~~~--yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
+.+.++++.|+.. +|+.+. ++..+.++ + .++++++.|.+.. .+. +.++++..+
T Consensus 179 ~~~~i~~~Grl~~~~~k~~~~-l~~a~~~~---~-----------~~~~l~ivG~g~~-~~~-------l~~~~~~~~-- 233 (359)
T PRK09922 179 KPAVFLYVGRLKFEGQKNVKE-LFDGLSQT---T-----------GEWQLHIIGDGSD-FEK-------CKAYSRELG-- 233 (359)
T ss_pred CCcEEEEEEEEecccCcCHHH-HHHHHHhh---C-----------CCeEEEEEeCCcc-HHH-------HHHHHHHcC--
Confidence 4567889999975 487777 66655442 1 1679999998843 222 333333211
Q ss_pred CCCCCcceEEEEcCCCH--HHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeec-cccchhhh
Q 005402 498 PEIGDLLKVIFVPDYNV--SVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTL-DGANVEIR 564 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~--~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~-DGw~vEi~ 564 (698)
+++ +|.|..--+. +.....++.||+++.||+ .|+.|++-.-||..|.+.|+|. .|-..|++
T Consensus 234 --l~~--~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv 297 (359)
T PRK09922 234 --IEQ--RIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDII 297 (359)
T ss_pred --CCC--eEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHc
Confidence 345 6777643332 445567788999999999 9999999999999999999876 45344443
No 81
>PLN02501 digalactosyldiacylglycerol synthase
Probab=97.64 E-value=0.00035 Score=82.18 Aligned_cols=116 Identities=9% Similarity=-0.016 Sum_probs=83.6
Q ss_pred HHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHH
Q 005402 411 EKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDV 490 (698)
Q Consensus 411 ~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~ 490 (698)
++.|...++. -..++.|++..|+.+. ++..+..+..- ..++++++.|.|.-.. . +...
T Consensus 538 r~lgi~~~~k--giLfVGRLa~EKGld~-LLeAla~L~~~-----------~pnvrLvIVGDGP~re--e------Le~l 595 (794)
T PLN02501 538 RELGQQAFSK--GAYFLGKMVWAKGYRE-LIDLLAKHKNE-----------LDGFNLDVFGNGEDAH--E------VQRA 595 (794)
T ss_pred HhcCCccccC--ceEEEEcccccCCHHH-HHHHHHHHHhh-----------CCCeEEEEEcCCccHH--H------HHHH
Confidence 3556543332 3567899999999999 98887765421 1258999999885221 1 3343
Q ss_pred hhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccc
Q 005402 491 GATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGAN 560 (698)
Q Consensus 491 a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~ 560 (698)
+... -++|.|+.. ...+..+++++||+.+||+ .|.-|+.-+-||..|.+.|+|..|..
T Consensus 596 a~eL--------gL~V~FLG~--~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~ 653 (794)
T PLN02501 596 AKRL--------DLNLNFLKG--RDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSN 653 (794)
T ss_pred HHHc--------CCEEEecCC--CCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCC
Confidence 4321 125777643 3445578999999999999 99999999999999999999988754
No 82
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=97.57 E-value=0.014 Score=66.96 Aligned_cols=141 Identities=9% Similarity=0.037 Sum_probs=97.2
Q ss_pred HHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCc-cCHHHHH
Q 005402 404 DVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA-TYVQAKR 482 (698)
Q Consensus 404 ~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p-~~~~~K~ 482 (698)
+.++.+++++| +..++..+-|+..-||... .|...+++++- .|..+ ..+++|..|.+.. .-..-++
T Consensus 273 ~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~-kl~Afe~~L~~---~Pe~~----gkv~Lvqi~~psr~~v~~y~~ 339 (487)
T TIGR02398 273 EMMERIRSELA-----GVKLILSAERVDYTKGILE-KLNAYERLLER---RPELL----GKVTLVTACVPAASGMTIYDE 339 (487)
T ss_pred HHHHHHHHHcC-----CceEEEEecccccccCHHH-HHHHHHHHHHh---Ccccc----CceEEEEEeCCCcccchHHHH
Confidence 34566888887 3568889999999999999 99999998653 44433 2467777666543 2344466
Q ss_pred HHHHHHHHhhhhcCCCCCCCcceEEEEcCC-CHHHHHhhccccccccccCCCcccCCCchhhHHHh-----cCceeeeec
Q 005402 483 IVKFITDVGATVNHDPEIGDLLKVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAM-----NGCILIGTL 556 (698)
Q Consensus 483 iIk~i~~~a~~in~dp~~~~~lkvvf~~nY-~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~-----NG~l~ist~ 556 (698)
+.+.+.+++..||..=.-.+.--|+++.++ .-+.--.+|..|||.+-||. .|.=++.-.-++. .|+|.+|-.
T Consensus 340 l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Eyva~~~~~~GvLILSef 417 (487)
T TIGR02398 340 LQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEYVAAQGLLDGVLVLSEF 417 (487)
T ss_pred HHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhHHhhhcCCCCCEEEecc
Confidence 778888888888753111122235555554 66666779999999999999 7776666544432 578888776
Q ss_pred ccc
Q 005402 557 DGA 559 (698)
Q Consensus 557 DGw 559 (698)
.|+
T Consensus 418 aGa 420 (487)
T TIGR02398 418 AGA 420 (487)
T ss_pred ccc
Confidence 664
No 83
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.46 E-value=0.0041 Score=62.20 Aligned_cols=117 Identities=16% Similarity=0.157 Sum_probs=82.1
Q ss_pred ceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCC
Q 005402 422 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 501 (698)
Q Consensus 422 ~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~ 501 (698)
..+.++.|+.+.|+.++ ++..+..+.... ....+++.|.+... +.- +..+...... .
T Consensus 200 ~~i~~~g~~~~~k~~~~-~i~~~~~~~~~~-----------~~~~~~~~g~~~~~----~~~---~~~~~~~~~~----~ 256 (381)
T COG0438 200 FVVLYVGRLDPEKGLDL-LIEAAAKLKKRG-----------PDIKLVIVGDGPER----REE---LEKLAKKLGL----E 256 (381)
T ss_pred eEEEEeeccChhcCHHH-HHHHHHHhhhhc-----------CCeEEEEEcCCCcc----HHH---HHHHHHHhCC----C
Confidence 68999999999999999 888877765421 12789999999876 111 2222222111 1
Q ss_pred CcceEEEEcCCC-HHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhh
Q 005402 502 DLLKVIFVPDYN-VSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 566 (698)
Q Consensus 502 ~~lkvvf~~nY~-~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~ 566 (698)
+ +|.|.-.-. ..+.. ++..||++++||+ .|+-|..-+-||..|++.|++.-|.+.|++..
T Consensus 257 ~--~v~~~g~~~~~~~~~-~~~~~~~~v~ps~--~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~ 317 (381)
T COG0438 257 D--NVKFLGYVPDEELAE-LLASADVFVLPSL--SEGFGLVLLEAMAAGTPVIASDVGGIPEVVED 317 (381)
T ss_pred C--cEEEecccCHHHHHH-HHHhCCEEEeccc--cccchHHHHHHHhcCCcEEECCCCChHHHhcC
Confidence 2 566633333 34555 8888899999999 69999999999999988888877766665533
No 84
>PLN02275 transferase, transferring glycosyl groups
Probab=97.17 E-value=0.0027 Score=69.39 Aligned_cols=137 Identities=14% Similarity=0.099 Sum_probs=92.2
Q ss_pred ceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhh-----hh-cccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhc
Q 005402 422 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVE-----RK-AKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVN 495 (698)
Q Consensus 422 ~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~-----~~-~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in 495 (698)
.++..+.|+..+|+.+. ++..+..+.......... .. ....+++|++.|.|.-. + + +.+.++..+
T Consensus 214 ~~i~~~grl~~~k~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~-~---~----l~~~~~~~~ 284 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGI-LLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQK-A---M----YEEKISRLN 284 (371)
T ss_pred EEEEEeCceeccCCHHH-HHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCH-H---H----HHHHHHHcC
Confidence 46678899999999999 998887764321000000 00 00125899999998532 1 1 333333211
Q ss_pred CCCCCCCcceEEEEcCC-CHHHHHhhccccccccccCCCc-ccCCCchhhHHHhcCceeeeeccccchhhhhhccCccee
Q 005402 496 HDPEIGDLLKVIFVPDY-NVSVAELLIPASELSQHISTAG-MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 573 (698)
Q Consensus 496 ~dp~~~~~lkvvf~~nY-~~~lA~~i~~g~Dv~l~~s~~~-~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~ 573 (698)
+. +|.|+.+| ..+--..++++||+++.++... .|..|+.-+-||.-|.+.|+|..|...|++++. +|||
T Consensus 285 ----l~---~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g--~~G~ 355 (371)
T PLN02275 285 ----LR---HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDG--KNGL 355 (371)
T ss_pred ----CC---ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCC--CCeE
Confidence 22 48887764 4555567899999998754322 377788899999999999999999888888763 7899
Q ss_pred ecc
Q 005402 574 LFG 576 (698)
Q Consensus 574 ~fG 576 (698)
++.
T Consensus 356 lv~ 358 (371)
T PLN02275 356 LFS 358 (371)
T ss_pred EEC
Confidence 986
No 85
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=96.75 E-value=0.43 Score=58.85 Aligned_cols=138 Identities=10% Similarity=0.090 Sum_probs=86.2
Q ss_pred HHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccC-HHHHHHH
Q 005402 406 VSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIV 484 (698)
Q Consensus 406 ~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~-~~~K~iI 484 (698)
++.++++++ +..++.-|-|+..-|+... -|...+++++- .|..+ ..+++|=..-..-.+ ..-+++-
T Consensus 353 ~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~-kL~AfE~fL~~---~Pe~r----~kVVLvQIa~psr~~v~eY~~l~ 419 (934)
T PLN03064 353 IKELKERFA-----GRKVMLGVDRLDMIKGIPQ-KILAFEKFLEE---NPEWR----DKVVLLQIAVPTRTDVPEYQKLT 419 (934)
T ss_pred HHHHHHHhC-----CceEEEEeeccccccCHHH-HHHHHHHHHHh---Ccccc----CCEEEEEEcCCCCCCcHHHHHHH
Confidence 566777765 2458889999999999999 99999998653 44433 123443222111111 2224455
Q ss_pred HHHHHHhhhhcCCCCCCCcceEEEEcC-CCHHHHHhhccccccccccCCCcccCCCchhhHHHhc-----Cceeeeeccc
Q 005402 485 KFITDVGATVNHDPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMN-----GCILIGTLDG 558 (698)
Q Consensus 485 k~i~~~a~~in~dp~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~N-----G~l~ist~DG 558 (698)
+.+.++..+||..=...+..-|.++.. +..+----+|++||+++.||. .|--++--+-+|.- |+|.+|-..|
T Consensus 420 ~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaG 497 (934)
T PLN03064 420 SQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAG 497 (934)
T ss_pred HHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCc
Confidence 667777777774211111123555433 444444568999999999999 87777777776654 7888765555
No 86
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=96.72 E-value=0.0098 Score=67.86 Aligned_cols=190 Identities=15% Similarity=0.088 Sum_probs=125.3
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEec--CCccCHHHHHHHHHHHHHhhhhcC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK--AFATYVQAKRIVKFITDVGATVNH 496 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gk--a~p~~~~~K~iIk~i~~~a~~in~ 496 (698)
-...|+.-+-||..-|+++| ++.+..++..... .++ +...-.+|+|+ -.+....-.+.++.+.++.+..+
T Consensus 271 ~~d~~~~siN~~~pgkd~~l-~l~a~~~~~~~i~-~~~-----~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~- 342 (495)
T KOG0853|consen 271 GIDRFFPSINRFEPGKDQDL-ALPAFTLLHDSIP-EPS-----ISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD- 342 (495)
T ss_pred ccceEeeeeeecCCCCCcee-ehhhHHhhhcccC-CCC-----CCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC-
Confidence 33578889999999999999 9998777764321 111 22456666662 35666666777788888887532
Q ss_pred CCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecc
Q 005402 497 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 576 (698)
Q Consensus 497 dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG 576 (698)
...+ .|.|+.--+-..--++++-|.+.+-+|. .|+=|.--.-||..|.+.|+|..|=
T Consensus 343 --l~g~--~v~~~~s~~~~~~yrl~adt~~v~~qPa--~E~FGiv~IEAMa~glPvvAt~~GG----------------- 399 (495)
T KOG0853|consen 343 --LLGQ--FVWFLPSTTRVAKYRLAADTKGVLYQPA--NEHFGIVPIEAMACGLPVVATNNGG----------------- 399 (495)
T ss_pred --ccCc--eEEEecCCchHHHHHHHHhcceEEecCC--CCCccceeHHHHhcCCCEEEecCCC-----------------
Confidence 2344 5666666655555666666666666666 8999999999999999999998883
Q ss_pred cchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHH---HHHHhhccCCCCCCCccccccCChhHHHHHHHHHH
Q 005402 577 ARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYD---ELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVD 653 (698)
Q Consensus 577 ~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~---~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~ 653 (698)
.+|+|.+ ..||+..+.+.+ .+-+.|.
T Consensus 400 -P~EiV~~----------------------~~tG~l~dp~~e~~~~~a~~~~---------------------------- 428 (495)
T KOG0853|consen 400 -PAEIVVH----------------------GVTGLLIDPGQEAVAELADALL---------------------------- 428 (495)
T ss_pred -ceEEEEc----------------------CCcceeeCCchHHHHHHHHHHH----------------------------
Confidence 4455542 234442222221 2333332
Q ss_pred HHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHh
Q 005402 654 EAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIW 690 (698)
Q Consensus 654 ~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~iw 690 (698)
+.-.|++.|.+|..++-.+- ..|||....++-+.-++
T Consensus 429 kl~~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 429 KLRRDPELWARMGKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 33468999999999987765 46999655555554444
No 87
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.42 E-value=0.014 Score=53.48 Aligned_cols=103 Identities=16% Similarity=0.077 Sum_probs=65.8
Q ss_pred CCceeeeccccchhhhhhhhhhH-HHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 420 DAMFDIQVKRIHEYKRQLMNILG-IVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 420 ~~~~~~~v~R~~~yKR~~Lnil~-~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
|.++++.+.+++.+|+.+. +++ ++.++.+- ..+++++|.|.+.+ . +.++..
T Consensus 1 ~~~~i~~~g~~~~~k~~~~-li~~~~~~l~~~-----------~p~~~l~i~G~~~~----~------l~~~~~------ 52 (135)
T PF13692_consen 1 DILYIGYLGRIRPDKGLEE-LIEAALERLKEK-----------HPDIELIIIGNGPD----E------LKRLRR------ 52 (135)
T ss_dssp --EEEE--S-SSGGGTHHH-HHH-HHHHHHHH-----------STTEEEEEECESS-----H------HCCHHH------
T ss_pred Ccccccccccccccccccc-hhhhHHHHHHHH-----------CcCEEEEEEeCCHH----H------HHHhcC------
Confidence 4578999999999999999 888 87776542 12589999999555 1 222211
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 558 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG 558 (698)
. +|.|.... .++ ..++++||+.+.|++ .-|.+++.-+-+|..|.+.|++-.|
T Consensus 53 ---~--~v~~~g~~-~e~-~~~l~~~dv~l~p~~-~~~~~~~k~~e~~~~G~pvi~~~~~ 104 (135)
T PF13692_consen 53 ---P--NVRFHGFV-EEL-PEILAAADVGLIPSR-FNEGFPNKLLEAMAAGKPVIASDNG 104 (135)
T ss_dssp ---C--TEEEE-S--HHH-HHHHHC-SEEEE-BS-S-SCC-HHHHHHHCTT--EEEEHHH
T ss_pred ---C--CEEEcCCH-HHH-HHHHHhCCEEEEEee-CCCcCcHHHHHHHHhCCCEEECCcc
Confidence 2 68888887 444 555788999999886 2346778889999999999987774
No 88
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.83 E-value=0.072 Score=58.30 Aligned_cols=104 Identities=8% Similarity=-0.051 Sum_probs=64.7
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
.+.+.++++.++.+.+..+| + ..+.+. ....+|+|.|.+++..... .+. +
T Consensus 203 ~~~~~i~y~G~l~~~~d~~l-l----~~la~~-----------~p~~~~vliG~~~~~~~~~--------~~~----~-- 252 (373)
T cd04950 203 LPRPVIGYYGAIAEWLDLEL-L----EALAKA-----------RPDWSFVLIGPVDVSIDPS--------ALL----R-- 252 (373)
T ss_pred CCCCEEEEEeccccccCHHH-H----HHHHHH-----------CCCCEEEEECCCcCccChh--------Hhc----c--
Confidence 34679999999998444444 2 222221 1257999999884332211 111 1
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcc---cCCCchhhHHHhcCceeeeec
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGM---EASGTSNMKFAMNGCILIGTL 556 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~---EasGts~Mka~~NG~l~ist~ 556 (698)
. . +|.|+.--.-+-....++++|+.++|++..- +.+++--+-+|.-|.+.|+|-
T Consensus 253 -~-~--nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~ 309 (373)
T cd04950 253 -L-P--NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATP 309 (373)
T ss_pred -C-C--CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecC
Confidence 1 2 5878765555566778899999999987432 223444455888999988773
No 89
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=95.46 E-value=0.2 Score=55.54 Aligned_cols=122 Identities=15% Similarity=0.182 Sum_probs=72.1
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
.++++++ ++.++++++++. .|+.++ ++..+.++.+- ..++.+|++|.+ |. ..+++.+++
T Consensus 224 ~~r~~~~----~~~~vil~~~~~--~~~~~~-ll~A~~~l~~~-----------~~~~~liivG~g-~~--r~~~l~~~~ 282 (425)
T PRK05749 224 TLRRQLA----PNRPVWIAASTH--EGEEEL-VLDAHRALLKQ-----------FPNLLLILVPRH-PE--RFKEVEELL 282 (425)
T ss_pred HHHHHhc----CCCcEEEEeCCC--chHHHH-HHHHHHHHHHh-----------CCCcEEEEcCCC-hh--hHHHHHHHH
Confidence 3455665 345677778764 467777 78877765431 125789999974 42 223444554
Q ss_pred HHHhhh--h--cCCCCCCCcceEEEEcCCCHHHHHhhccccccccc-cCCCcccCCCchhhHHHhcCceeeee
Q 005402 488 TDVGAT--V--NHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQH-ISTAGMEASGTSNMKFAMNGCILIGT 555 (698)
Q Consensus 488 ~~~a~~--i--n~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~-~s~~~~EasGts~Mka~~NG~l~ist 555 (698)
.+..-. . ..++.-++ ..+++.+.--++ ..+|++||+... +|. .|..|++-+-||..|.+.|++
T Consensus 283 ~~~gl~~~~~~~~~~~~~~--~~v~l~~~~~el-~~~y~~aDi~~v~~S~--~e~~g~~~lEAma~G~PVI~g 350 (425)
T PRK05749 283 KKAGLSYVRRSQGEPPSAD--TDVLLGDTMGEL-GLLYAIADIAFVGGSL--VKRGGHNPLEPAAFGVPVISG 350 (425)
T ss_pred HhCCCcEEEccCCCCCCCC--CcEEEEecHHHH-HHHHHhCCEEEECCCc--CCCCCCCHHHHHHhCCCEEEC
Confidence 443210 0 00000001 134444433344 588899999555 566 588999999999999999854
No 90
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.19 E-value=0.22 Score=57.75 Aligned_cols=177 Identities=12% Similarity=0.077 Sum_probs=111.1
Q ss_pred CCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC--
Q 005402 420 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD-- 497 (698)
Q Consensus 420 ~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d-- 497 (698)
...+-+.|=|+ +.|+.+- ++..+.++..- ...+++.|-|.+.+. ...+.+-+.|.++....+.+
T Consensus 320 ~~~I~v~idrL-~ek~~~~-~I~av~~~~~~-----------~p~~~L~~~gy~~~~-~~~~~l~~~i~~~~~~~~~~~~ 385 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQ-ILQQLLQYILK-----------NPDYELKILTYNNDN-DITQLLEDILEQINEEYNQDKN 385 (519)
T ss_pred ceEEEEEcCCC-ChHHHHH-HHHHHHHHHhh-----------CCCeEEEEEEecCch-hHHHHHHHHHHHHHhhhchhhh
Confidence 34444445599 9999999 98888888653 125899999999652 12333333333332210000
Q ss_pred -----------C-----CCCCcceEEEEcCCCH--HHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecccc
Q 005402 498 -----------P-----EIGDLLKVIFVPDYNV--SVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA 559 (698)
Q Consensus 498 -----------p-----~~~~~lkvvf~~nY~~--~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw 559 (698)
+ .-......+.+.+|-- .+. ..+.-+.+.+.+|+ .|.=+ ++|-|+--|.+.| .=|-
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~-~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqI--nyg~ 459 (519)
T TIGR03713 386 FFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLI-SALDKLRLIIDLSK--EPDLY-TQISGISAGIPQI--NKVE 459 (519)
T ss_pred ccccchhhhhhhcccchhhcccccEEEEEecCCHHHHH-HHHhhheEEEECCC--CCChH-HHHHHHHcCCCee--ecCC
Confidence 0 0000003577778776 666 78889999999999 88888 9999999999888 1110
Q ss_pred chhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCcccccc
Q 005402 560 NVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVG 639 (698)
Q Consensus 560 ~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~ 639 (698)
-|.++. +.||+++|. ..+|.+
T Consensus 460 -~~~V~d--~~NG~li~d---------------------------------------~~~l~~----------------- 480 (519)
T TIGR03713 460 -TDYVEH--NKNGYIIDD---------------------------------------ISELLK----------------- 480 (519)
T ss_pred -ceeeEc--CCCcEEeCC---------------------------------------HHHHHH-----------------
Confidence 111211 255555522 222222
Q ss_pred CChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHH
Q 005402 640 KDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYA 686 (698)
Q Consensus 640 ~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~ 686 (698)
.+..+..+++.|+++...++..+..||++.-+++..
T Consensus 481 -----------al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~ 516 (519)
T TIGR03713 481 -----------ALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLN 516 (519)
T ss_pred -----------HHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 223345789999999999999888999998887643
No 91
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=94.88 E-value=0.063 Score=55.99 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=28.6
Q ss_pred cCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeecc
Q 005402 39 QEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRY 75 (698)
Q Consensus 39 ~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y 75 (698)
.|..+=.-.||||..+++.-++++.+|..+.-+--+|
T Consensus 7 ~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 7 SEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred cccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence 3443337899999999999999999999999888887
No 92
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=94.87 E-value=0.56 Score=51.11 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=60.2
Q ss_pred HHHHhCCCCCCCCc-eeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEE-EecCCccCHHHHHHHHH
Q 005402 409 IKEKTGYSVSPDAM-FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIF-GGKAFATYVQAKRIVKF 486 (698)
Q Consensus 409 l~~~~g~~~~~~~~-~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If-~Gka~p~~~~~K~iIk~ 486 (698)
+++++|++ ++.+ +..+.+|+...|+... ++.. +.+. .++++++ +|...+ ... .
T Consensus 192 ~~~~~~l~--~~~~~il~~~G~~~~~k~~~~-li~~---l~~~------------~~~~~viv~G~~~~-~~~------~ 246 (380)
T PRK13609 192 IYNKYQLC--PNKKILLIMAGAHGVLGNVKE-LCQS---LMSV------------PDLQVVVVCGKNEA-LKQ------S 246 (380)
T ss_pred HHHHcCCC--CCCcEEEEEcCCCCCCcCHHH-HHHH---HhhC------------CCcEEEEEeCCCHH-HHH------H
Confidence 46677754 4444 4556677766665544 3332 2111 1467765 464322 111 1
Q ss_pred HHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeec
Q 005402 487 ITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTL 556 (698)
Q Consensus 487 i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~ 556 (698)
+.+..+ .. ++ +|.|+ +|-..+ ..++++||+++. ++.|++-+-||..|.+.|++.
T Consensus 247 l~~~~~---~~---~~--~v~~~-g~~~~~-~~l~~~aD~~v~------~~gg~t~~EA~a~g~PvI~~~ 300 (380)
T PRK13609 247 LEDLQE---TN---PD--ALKVF-GYVENI-DELFRVTSCMIT------KPGGITLSEAAALGVPVILYK 300 (380)
T ss_pred HHHHHh---cC---CC--cEEEE-echhhH-HHHHHhccEEEe------CCCchHHHHHHHhCCCEEECC
Confidence 333333 11 23 56665 553333 467899999862 456887789999999988654
No 93
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=94.63 E-value=0.39 Score=51.69 Aligned_cols=173 Identities=12% Similarity=-0.016 Sum_probs=99.2
Q ss_pred CCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 418 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 418 ~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
+++.+++.++.|+...|...--+...+.++.+ . +..+++.|.+.. + . +.+.+ + .
T Consensus 180 ~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~------------~-~~~~~~~G~g~~--~-~--~~~~~-~-~------ 233 (357)
T PRK00726 180 REGKPTLLVVGGSQGARVLNEAVPEALALLPE------------A-LQVIHQTGKGDL--E-E--VRAAY-A-A------ 233 (357)
T ss_pred CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhh------------C-cEEEEEcCCCcH--H-H--HHHHh-h-c------
Confidence 45677888888888877653303355444321 1 455677888762 1 1 11111 1 1
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeeccc
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 577 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~ 577 (698)
+ ++ +.+.+|- +--..++++||+++..|- +.+-+-||.-|.+.|++-.|=..+ |+ . ..
T Consensus 234 ----~-~~-v~~~g~~-~~~~~~~~~~d~~i~~~g------~~~~~Ea~~~g~Pvv~~~~~~~~~-----~~-~----~~ 290 (357)
T PRK00726 234 ----G-IN-AEVVPFI-DDMAAAYAAADLVICRAG------ASTVAELAAAGLPAILVPLPHAAD-----DH-Q----TA 290 (357)
T ss_pred ----C-Cc-EEEeehH-hhHHHHHHhCCEEEECCC------HHHHHHHHHhCCCEEEecCCCCCc-----Cc-H----HH
Confidence 1 13 4455664 334578899999997441 255679999999999886530000 00 0 00
Q ss_pred chhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCC--CHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHH
Q 005402 578 RAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSY--NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE 654 (698)
Q Consensus 578 ~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~--~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~ 654 (698)
.++.+. ..+.|. .... +.++|.++|. .
T Consensus 291 ~~~~i~----------------------~~~~g~~~~~~~~~~~~l~~~i~----------------------------~ 320 (357)
T PRK00726 291 NARALV----------------------DAGAALLIPQSDLTPEKLAEKLL----------------------------E 320 (357)
T ss_pred HHHHHH----------------------HCCCEEEEEcccCCHHHHHHHHH----------------------------H
Confidence 011111 123333 2222 2566665554 3
Q ss_pred HhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 655 AYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 655 ~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
++.|++...+|..++......|+.++.++.+.+.+
T Consensus 321 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 321 LLSDPERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred HHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 55677777888888877667899999999987765
No 94
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=93.47 E-value=2.1 Score=47.07 Aligned_cols=114 Identities=8% Similarity=-0.094 Sum_probs=69.0
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeE-EEEEecCCccCHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRV-CIFGGKAFATYVQAKRIVKF 486 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q-~If~Gka~p~~~~~K~iIk~ 486 (698)
.+++++|+ +|+.+++.++.|....|+..- ++..+........ . ...+.| ++++|+..+.. +.
T Consensus 195 ~~r~~~gl--~~~~~~il~~Gg~~g~~~~~~-li~~l~~~~~~~~---~----~~~~~~~~vi~G~~~~~~-------~~ 257 (382)
T PLN02605 195 ELRRELGM--DEDLPAVLLMGGGEGMGPLEE-TARALGDSLYDKN---L----GKPIGQVVVICGRNKKLQ-------SK 257 (382)
T ss_pred HHHHHcCC--CCCCcEEEEECCCcccccHHH-HHHHHHHhhcccc---c----cCCCceEEEEECCCHHHH-------HH
Confidence 46778885 477899999999999998777 6665544321000 0 011455 67888763211 11
Q ss_pred HHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeec
Q 005402 487 ITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTL 556 (698)
Q Consensus 487 i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~ 556 (698)
+.+.+. .. +|. +.+|-..+. .++++||+++..| .|++-+-||.-|.+.|+|.
T Consensus 258 L~~~~~--------~~--~v~-~~G~~~~~~-~l~~aaDv~V~~~------g~~ti~EAma~g~PvI~~~ 309 (382)
T PLN02605 258 LESRDW--------KI--PVK-VRGFVTNME-EWMGACDCIITKA------GPGTIAEALIRGLPIILNG 309 (382)
T ss_pred HHhhcc--------cC--CeE-EEeccccHH-HHHHhCCEEEECC------CcchHHHHHHcCCCEEEec
Confidence 222221 12 333 333433344 5679999999643 3667789999999999774
No 95
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=92.30 E-value=1.8 Score=47.96 Aligned_cols=179 Identities=11% Similarity=0.027 Sum_probs=99.0
Q ss_pred HHHHHhCCCCCCCCc-eeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEE-EEecCCccCHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAM-FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCI-FGGKAFATYVQAKRIVK 485 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~-~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~I-f~Gka~p~~~~~K~iIk 485 (698)
.+++++|++ ++.+ +..++.|+...|+.+. ++..+ .+. ..++|++ ++|+....+ ++
T Consensus 191 ~~~~~~~l~--~~~~~ilv~~G~lg~~k~~~~-li~~~---~~~-----------~~~~~~vvv~G~~~~l~---~~--- 247 (391)
T PRK13608 191 QWLIDNNLD--PDKQTILMSAGAFGVSKGFDT-MITDI---LAK-----------SANAQVVMICGKSKELK---RS--- 247 (391)
T ss_pred HHHHHcCCC--CCCCEEEEECCCcccchhHHH-HHHHH---Hhc-----------CCCceEEEEcCCCHHHH---HH---
Confidence 345667754 4444 4567899987787766 55432 111 1146774 456542111 11
Q ss_pred HHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhh
Q 005402 486 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQ 565 (698)
Q Consensus 486 ~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~ 565 (698)
+.+... . .+ +|. +.+|-..+ ..++++||+++. +|.|++-.-||..|.+.|.+...
T Consensus 248 -l~~~~~---~----~~--~v~-~~G~~~~~-~~~~~~aDl~I~------k~gg~tl~EA~a~G~PvI~~~~~------- 302 (391)
T PRK13608 248 -LTAKFK---S----NE--NVL-ILGYTKHM-NEWMASSQLMIT------KPGGITISEGLARCIPMIFLNPA------- 302 (391)
T ss_pred -HHHHhc---c----CC--CeE-EEeccchH-HHHHHhhhEEEe------CCchHHHHHHHHhCCCEEECCCC-------
Confidence 222111 1 12 343 34565444 566799999984 34577778999999999866321
Q ss_pred hccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHH
Q 005402 566 EVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSY 645 (698)
Q Consensus 566 ~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy 645 (698)
+ + .+..+. ..+...+.|.. ..+.+++.+.|.
T Consensus 303 --p--------g--qe~~N~----------------~~~~~~G~g~~-~~~~~~l~~~i~-------------------- 333 (391)
T PRK13608 303 --P--------G--QELENA----------------LYFEEKGFGKI-ADTPEEAIKIVA-------------------- 333 (391)
T ss_pred --C--------C--cchhHH----------------HHHHhCCcEEE-eCCHHHHHHHHH--------------------
Confidence 0 0 000000 00001111211 224444444332
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhc
Q 005402 646 LECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 646 ~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~ 691 (698)
.+..|++.+.+|..++-.....||+++.++++.+.+=+
T Consensus 334 --------~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~ 371 (391)
T PRK13608 334 --------SLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGH 371 (391)
T ss_pred --------HHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhh
Confidence 34568888888888887766789999999999877643
No 96
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=91.92 E-value=2.8 Score=45.46 Aligned_cols=119 Identities=11% Similarity=-0.021 Sum_probs=69.1
Q ss_pred HHHHhCCCCCCCCceeeecccc-chhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 409 IKEKTGYSVSPDAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 409 l~~~~g~~~~~~~~~~~~v~R~-~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
++++++. + ...+.+...|. ...|+... +++.+.++.+- ..++++||.|-+.|. ..+. +
T Consensus 189 ~~~~~~~--~-~~~vl~~~hr~~~~~k~~~~-ll~a~~~l~~~-----------~~~~~~vi~~~~~~~--~~~~----~ 247 (365)
T TIGR00236 189 VLSEFGE--D-KRYILLTLHRRENVGEPLEN-IFKAIREIVEE-----------FEDVQIVYPVHLNPV--VREP----L 247 (365)
T ss_pred HHHhcCC--C-CCEEEEecCchhhhhhHHHH-HHHHHHHHHHH-----------CCCCEEEEECCCChH--HHHH----H
Confidence 4455552 2 23444455554 33466666 77877765431 114688887643332 1111 1
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecc-ccchhhh
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIR 564 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~D-Gw~vEi~ 564 (698)
.+... ..+ +|.|+...+..-.-.+++.||+.+.+| |+.++-||.-|++.|.+.+ |.+.|++
T Consensus 248 ~~~~~-------~~~--~v~~~~~~~~~~~~~~l~~ad~vv~~S-------g~~~~EA~a~g~PvI~~~~~~~~~e~~ 309 (365)
T TIGR00236 248 HKHLG-------DSK--RVHLIEPLEYLDFLNLAANSHLILTDS-------GGVQEEAPSLGKPVLVLRDTTERPETV 309 (365)
T ss_pred HHHhC-------CCC--CEEEECCCChHHHHHHHHhCCEEEECC-------hhHHHHHHHcCCCEEECCCCCCChHHH
Confidence 11111 123 688887655544557789999987554 6668999999999998754 5444544
No 97
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=91.42 E-value=4.6 Score=46.57 Aligned_cols=143 Identities=14% Similarity=0.096 Sum_probs=79.2
Q ss_pred HHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEec-CCccCHHHHHH
Q 005402 405 VVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK-AFATYVQAKRI 483 (698)
Q Consensus 405 l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gk-a~p~~~~~K~i 483 (698)
..+.|+++++- +..+++-+-|+..-||..+ =|..++++++- .|..+ ..+++|=.+- +-..-..-.++
T Consensus 264 ~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~-kl~Afe~fL~~---~P~~~----~kv~liQi~~psr~~~~~y~~~ 331 (474)
T PF00982_consen 264 RAEELREKFKG----KRKIIVGVDRLDYTKGIPE-KLRAFERFLER---YPEYR----GKVVLIQIAVPSREDVPEYQEL 331 (474)
T ss_dssp HHHHHHHHTTT-----SEEEEEE--B-GGG-HHH-HHHHHHHHHHH----GGGT----TTEEEEEE--B-STTSHHHHHH
T ss_pred HHHHHHHhcCC----CcEEEEEeccchhhcCHHH-HHHHHHHHHHh---CcCcc----CcEEEEEEeeccCccchhHHHH
Confidence 34566777652 2467888999999999999 88999998764 56544 2455543222 22333445567
Q ss_pred HHHHHHHhhhhcCCCCCCCcceEEEEcC-CCHHHHHhhccccccccccCCCcccCCCchhhH-----HH--hcCceeeee
Q 005402 484 VKFITDVGATVNHDPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMK-----FA--MNGCILIGT 555 (698)
Q Consensus 484 Ik~i~~~a~~in~dp~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mk-----a~--~NG~l~ist 555 (698)
-+.+.+++..||..=.-.+.--|.++.. .+.+.-=-++..||+.+-+|. . .|.+-+- +- ..|+|.+|.
T Consensus 332 ~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTsl--r--DGmNLva~Eyva~q~~~~GvLiLSe 407 (474)
T PF00982_consen 332 RREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSL--R--DGMNLVAKEYVACQDDNPGVLILSE 407 (474)
T ss_dssp HHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--S--S--BS--HHHHHHHHHS-TS--EEEEET
T ss_pred HHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecch--h--hccCCcceEEEEEecCCCCceEeec
Confidence 7888888888885211112223677765 454544557999999999999 3 4544221 11 469999999
Q ss_pred ccccchhh
Q 005402 556 LDGANVEI 563 (698)
Q Consensus 556 ~DGw~vEi 563 (698)
..|+--+.
T Consensus 408 faGaa~~L 415 (474)
T PF00982_consen 408 FAGAAEQL 415 (474)
T ss_dssp TBGGGGT-
T ss_pred cCCHHHHc
Confidence 99975543
No 98
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=91.29 E-value=4.7 Score=43.72 Aligned_cols=110 Identities=16% Similarity=0.125 Sum_probs=65.5
Q ss_pred HHHHHhCCCCCCCCcee-e-eccccchhhhh-hhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFD-I-QVKRIHEYKRQ-LMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIV 484 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~-~-~v~R~~~yKR~-~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iI 484 (698)
.+++++|++ ++.+++ + --+|..+.|+. .. ++..+.++.+. ..++++++.|- +|.+...
T Consensus 175 ~~~~~l~~~--~~~~~il~~~gsr~~~~~~~~~~-l~~a~~~l~~~-----------~~~~~~ii~~~-~~~~~~~---- 235 (380)
T PRK00025 175 AARARLGLD--PDARVLALLPGSRGQEIKRLLPP-FLKAAQLLQQR-----------YPDLRFVLPLV-NPKRREQ---- 235 (380)
T ss_pred HHHHHcCCC--CCCCEEEEECCCCHHHHHHHHHH-HHHHHHHHHHh-----------CCCeEEEEecC-ChhhHHH----
Confidence 355677754 444433 2 34688887764 44 66666665431 12478888764 3444332
Q ss_pred HHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeec
Q 005402 485 KFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTL 556 (698)
Q Consensus 485 k~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~ 556 (698)
+.+..+. .+ .+++.+..+ + ...++++||+.+.+ ||++.+-||..|.+.|.+.
T Consensus 236 --~~~~~~~---~~----~~~v~~~~~---~-~~~~~~~aDl~v~~-------sG~~~lEa~a~G~PvI~~~ 287 (380)
T PRK00025 236 --IEEALAE---YA----GLEVTLLDG---Q-KREAMAAADAALAA-------SGTVTLELALLKVPMVVGY 287 (380)
T ss_pred --HHHHHhh---cC----CCCeEEEcc---c-HHHHHHhCCEEEEC-------ccHHHHHHHHhCCCEEEEE
Confidence 3232221 10 113444432 2 35678999999984 5999999999999998664
No 99
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=90.63 E-value=3 Score=44.34 Aligned_cols=105 Identities=13% Similarity=0.004 Sum_probs=59.2
Q ss_pred HhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEE-EEEecCCccCHHHHHHHHHHHHH
Q 005402 412 KTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVC-IFGGKAFATYVQAKRIVKFITDV 490 (698)
Q Consensus 412 ~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~-If~Gka~p~~~~~K~iIk~i~~~ 490 (698)
++|+ +++.++++++.|....|...-.+...+.++.+ .++++ +++|.+.. + . +.+.
T Consensus 172 ~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~-------------~~~~~~~~~g~~~~--~---~----l~~~ 227 (348)
T TIGR01133 172 RFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAE-------------KGIQIVHQTGKNDL--E---K----VKNV 227 (348)
T ss_pred hcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhh-------------cCcEEEEECCcchH--H---H----HHHH
Confidence 4454 46777888888887787754314445444321 03344 45555422 1 1 2332
Q ss_pred hhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCC-chhhHHHhcCceeeeecc
Q 005402 491 GATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASG-TSNMKFAMNGCILIGTLD 557 (698)
Q Consensus 491 a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasG-ts~Mka~~NG~l~ist~D 557 (698)
.+. .+ +.+ +|.|. +. . .+.++++||+++.+ || ++-+-||..|.+.|+|..
T Consensus 228 ~~~---~~-l~~--~v~~~--~~-~-~~~~l~~ad~~v~~-------~g~~~l~Ea~~~g~Pvv~~~~ 278 (348)
T TIGR01133 228 YQE---LG-IEA--IVTFI--DE-N-MAAAYAAADLVISR-------AGASTVAELAAAGVPAILIPY 278 (348)
T ss_pred Hhh---CC-ceE--EecCc--cc-C-HHHHHHhCCEEEEC-------CChhHHHHHHHcCCCEEEeeC
Confidence 221 11 222 33444 32 2 25789999999963 35 456799999999998744
No 100
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=90.11 E-value=42 Score=38.89 Aligned_cols=141 Identities=9% Similarity=0.016 Sum_probs=87.6
Q ss_pred HHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCC-ccCHHHHHHH
Q 005402 406 VSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAF-ATYVQAKRIV 484 (698)
Q Consensus 406 ~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~-p~~~~~K~iI 484 (698)
++.++++++ +.-++.-+-|+.--||... =|...+++++- .|..+ ..+++|=..-.. ..-..-+++-
T Consensus 245 ~~~lr~~~~-----~~~lilgVDRLDytKGi~~-rl~Afe~fL~~---~Pe~~----gkvvlvQia~psR~~v~~Y~~l~ 311 (474)
T PRK10117 245 LAQLKAELK-----NVQNIFSVERLDYSKGLPE-RFLAYEALLEK---YPQHH----GKIRYTQIAPTSRGDVQAYQDIR 311 (474)
T ss_pred HHHHHHHcC-----CCeEEEEecccccccCHHH-HHHHHHHHHHh---Chhhc----CCEEEEEEcCCCCCccHHHHHHH
Confidence 456777765 2346677999999999988 88888998753 55544 244554332222 2223345677
Q ss_pred HHHHHHhhhhcCCCCCCCcceEEEEcC-CCHHHHHhhccccccccccCCCcccCCCchhh----HHH----hcCceeeee
Q 005402 485 KFITDVGATVNHDPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNM----KFA----MNGCILIGT 555 (698)
Q Consensus 485 k~i~~~a~~in~dp~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~M----ka~----~NG~l~ist 555 (698)
+.|.++...||..=.-.+..-|.++.. ++-+..--+|.+|||.+-+|.| -|++-. -|+ ..|+|.+|-
T Consensus 312 ~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplR----DGMNLVAkEyva~q~~~~~GvLILSe 387 (474)
T PRK10117 312 HQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLR----DGMNLVAKEYVAAQDPANPGVLVLSQ 387 (474)
T ss_pred HHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccc----cccccccchheeeecCCCCccEEEec
Confidence 778888888885422222233555443 4444444679999999999984 233310 111 349999998
Q ss_pred ccccchhh
Q 005402 556 LDGANVEI 563 (698)
Q Consensus 556 ~DGw~vEi 563 (698)
..|+--|.
T Consensus 388 fAGaA~~L 395 (474)
T PRK10117 388 FAGAANEL 395 (474)
T ss_pred ccchHHHh
Confidence 88865543
No 101
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.53 E-value=3.7 Score=43.65 Aligned_cols=108 Identities=11% Similarity=0.027 Sum_probs=61.0
Q ss_pred HHHhCCCCCCCCceeeeccccchhhhh-hhhhhHHHHHHHHHHhcChhhhhcccCCeE-EEEEecCCccCHHHHHHHHHH
Q 005402 410 KEKTGYSVSPDAMFDIQVKRIHEYKRQ-LMNILGIVYRYKKMKEMSAVERKAKFVPRV-CIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 410 ~~~~g~~~~~~~~~~~~v~R~~~yKR~-~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q-~If~Gka~p~~~~~K~iIk~i 487 (698)
+++.+. +++..++..+.|...+|+. ++ +...+..+.+ .+.+ +++.|.+. . .++.+.+
T Consensus 172 ~~~~~~--~~~~~~i~~~~g~~~~~~~~~~-l~~a~~~l~~-------------~~~~~~~i~G~g~---~--~~l~~~~ 230 (350)
T cd03785 172 RARLGL--RPGKPTLLVFGGSQGARAINEA-VPEALAELLR-------------KRLQVIHQTGKGD---L--EEVKKAY 230 (350)
T ss_pred HHhcCC--CCCCeEEEEECCcHhHHHHHHH-HHHHHHHhhc-------------cCeEEEEEcCCcc---H--HHHHHHH
Confidence 445554 4666777777776677654 34 4444444321 1344 45677761 1 1222222
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 558 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG 558 (698)
.++ .+ +|.|.. |- +-...++++||+++.+|- |++-+-||..|.+.|++..+
T Consensus 231 ~~~----------~~--~v~~~g-~~-~~~~~~l~~ad~~v~~sg------~~t~~Eam~~G~Pvv~~~~~ 281 (350)
T cd03785 231 EEL----------GV--NYEVFP-FI-DDMAAAYAAADLVISRAG------ASTVAELAALGLPAILIPLP 281 (350)
T ss_pred hcc----------CC--CeEEee-hh-hhHHHHHHhcCEEEECCC------HhHHHHHHHhCCCEEEeecC
Confidence 221 12 455443 43 334567799999996441 35567999999999987554
No 102
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=88.59 E-value=17 Score=45.04 Aligned_cols=147 Identities=8% Similarity=-0.004 Sum_probs=88.2
Q ss_pred HHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCC-ccCHHHHHHH
Q 005402 406 VSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAF-ATYVQAKRIV 484 (698)
Q Consensus 406 ~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~-p~~~~~K~iI 484 (698)
++.++++++- ++..++.=|-|+.--||..+ =|...+++++- +|..+ ..+++|=-.-.. -.-..-+++-
T Consensus 327 ~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~-kl~A~e~~L~~---~P~~~----gkvvlvQia~psr~~~~~y~~~~ 395 (854)
T PLN02205 327 VKELIKQFCD---QDRIMLLGVDDMDIFKGISL-KLLAMEQLLMQ---HPEWQ----GKVVLVQIANPARGKGKDVKEVQ 395 (854)
T ss_pred HHHHHHHhcc---CCCEEEEEccCcccccCHHH-HHHHHHHHHHh---Ccccc----CCEEEEEEecCCCcccHHHHHHH
Confidence 4556777652 34568888999999999999 78888888653 55544 234444322222 1223344566
Q ss_pred HHHHHHhhhhcCCCCCCCcceEEEEc-CCCHHHHHhhccccccccccCCCc------ccC--CCch--hhH-------H-
Q 005402 485 KFITDVGATVNHDPEIGDLLKVIFVP-DYNVSVAELLIPASELSQHISTAG------MEA--SGTS--NMK-------F- 545 (698)
Q Consensus 485 k~i~~~a~~in~dp~~~~~lkvvf~~-nY~~~lA~~i~~g~Dv~l~~s~~~------~Ea--sGts--~Mk-------a- 545 (698)
+.+.++..+||..=.-.+.--|.++. .+..+----+|..||+.+-+|.|- +|- |-.. ++. .
T Consensus 396 ~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~ 475 (854)
T PLN02205 396 AETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPST 475 (854)
T ss_pred HHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCcccccccccccccc
Confidence 67778888887532112223466663 344444445799999999999852 232 2110 110 0
Q ss_pred HhcCceeeeeccccchhh
Q 005402 546 AMNGCILIGTLDGANVEI 563 (698)
Q Consensus 546 ~~NG~l~ist~DGw~vEi 563 (698)
-..|+|.+|-..|+-.|.
T Consensus 476 ~~~gvLiLSEfaGaa~~L 493 (854)
T PLN02205 476 PKKSMLVVSEFIGCSPSL 493 (854)
T ss_pred CCCCceEeeeccchhHHh
Confidence 146889998888866554
No 103
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=86.69 E-value=0.74 Score=54.08 Aligned_cols=53 Identities=26% Similarity=0.289 Sum_probs=36.1
Q ss_pred CCcceEEEEcCCCHHH-------HHhhccccccccccCCCcccCCCchhhHHHhcCceeeee
Q 005402 501 GDLLKVIFVPDYNVSV-------AELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGT 555 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~l-------A~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist 555 (698)
.++.||+|+|.|=-+- =.-++.|||+-..||. +||-|...+-+...|++.|.|
T Consensus 440 ~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSY--YEPWGYTPlE~~a~gVPsITT 499 (633)
T PF05693_consen 440 EDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSY--YEPWGYTPLECTAFGVPSITT 499 (633)
T ss_dssp T-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--S--SBSS-HHHHHHHHTT--EEEE
T ss_pred CCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccc--cccccCChHHHhhcCCceeec
Confidence 4789999999873222 1357899999999999 999999999999999999966
No 104
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=82.18 E-value=1.1e+02 Score=35.76 Aligned_cols=132 Identities=15% Similarity=0.097 Sum_probs=83.3
Q ss_pred ceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEE-EEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 422 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCI-FGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 422 ~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~I-f~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
-++.-+=|+..=||..- =|...+|+++- .|.-+ . .+.+| ++=...+.-+.-+.+-+.+..+..+||.-=.-
T Consensus 283 kiivgvDRlDy~kGi~~-rl~Afe~lL~~---~Pe~~-~---kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~ 354 (486)
T COG0380 283 KLIVGVDRLDYSKGIPQ-RLLAFERLLEE---YPEWR-G---KVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGS 354 (486)
T ss_pred eEEEEehhcccccCcHH-HHHHHHHHHHh---Chhhh-C---ceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCC
Confidence 46667789999999877 77888888653 55554 2 34443 33334444444577888899999999864211
Q ss_pred CCcceEEEE-cCCCHHHHHhhccccccccccCCCcccCCCchhh----HHH---hcCceeeeeccccchhhhh
Q 005402 501 GDLLKVIFV-PDYNVSVAELLIPASELSQHISTAGMEASGTSNM----KFA---MNGCILIGTLDGANVEIRQ 565 (698)
Q Consensus 501 ~~~lkvvf~-~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~M----ka~---~NG~l~ist~DGw~vEi~~ 565 (698)
-+.--|.|+ ...+-..--.++..||+.+-+|.| .|.+-+ -|+ .+|+|.+|-..|+--|...
T Consensus 355 ~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplr----DGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~ 423 (486)
T COG0380 355 LSWTPVHYLHRDLDRNELLALYRAADVMLVTPLR----DGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD 423 (486)
T ss_pred CCcceeEEEeccCCHHHHHHHHhhhceeeecccc----ccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc
Confidence 111223443 224444444588999999999994 355432 122 3699999998887666543
No 105
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=80.92 E-value=41 Score=37.65 Aligned_cols=98 Identities=19% Similarity=0.169 Sum_probs=75.2
Q ss_pred cCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCch
Q 005402 462 FVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTS 541 (698)
Q Consensus 462 ~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts 541 (698)
..|+-++++|+---... .+-.|.+.++|..++ +++ +|.|.-|---+.--.++.-|-+-++.=- -|-=|.|
T Consensus 303 ~~~iKL~ivGScRneeD--~ervk~Lkd~a~~L~----i~~--~v~F~~N~Py~~lv~lL~~a~iGvh~Mw--NEHFGIs 372 (465)
T KOG1387|consen 303 VSPIKLIIVGSCRNEED--EERVKSLKDLAEELK----IPK--HVQFEKNVPYEKLVELLGKATIGVHTMW--NEHFGIS 372 (465)
T ss_pred cCCceEEEEeccCChhh--HHHHHHHHHHHHhcC----Ccc--ceEEEecCCHHHHHHHhccceeehhhhh--hhhcchh
Confidence 45788888887653332 345788888998665 678 8999988777777777788888888777 8999999
Q ss_pred hhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhhhhh
Q 005402 542 NMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLR 586 (698)
Q Consensus 542 ~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~~~ 586 (698)
-.-+|.-|.+||+.-.| |.+-|-|.++.
T Consensus 373 VVEyMAAGlIpi~h~Sg-----------------GP~lDIV~~~~ 400 (465)
T KOG1387|consen 373 VVEYMAAGLIPIVHNSG-----------------GPLLDIVTPWD 400 (465)
T ss_pred HHHHHhcCceEEEeCCC-----------------CCceeeeeccC
Confidence 99999999999955444 37878887543
No 106
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=79.79 E-value=8.6 Score=41.19 Aligned_cols=111 Identities=16% Similarity=0.154 Sum_probs=63.6
Q ss_pred HHhCCCCCCCCceeeeccccch---hhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 411 EKTGYSVSPDAMFDIQVKRIHE---YKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 411 ~~~g~~~~~~~~~~~~v~R~~~---yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
+.+|. .++..+.++..|... .|+.+. ++..+.++.. . .+++|+.| ++.... .+.+.+
T Consensus 191 ~~~~~--~~~~~vlv~~~r~~~~~~~k~~~~-l~~al~~l~~------------~-~~~vi~~~--~~~~~~--~l~~~~ 250 (363)
T cd03786 191 ELLGL--LPKKYILVTLHRVENVDDGEQLEE-ILEALAELAE------------E-DVPVVFPN--HPRTRP--RIREAG 250 (363)
T ss_pred hhccc--CCCCEEEEEeCCccccCChHHHHH-HHHHHHHHHh------------c-CCEEEEEC--CCChHH--HHHHHH
Confidence 45554 344556777888765 788888 8887765421 0 25666544 444332 222223
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecc
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD 557 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~D 557 (698)
.++.. . .+ +|.|+.--...--..++++||+++.+|- |+ +.-||..|.+.|.+.+
T Consensus 251 ~~~~~---~----~~--~v~~~~~~~~~~~~~l~~~ad~~v~~Sg------gi-~~Ea~~~g~PvI~~~~ 304 (363)
T cd03786 251 LEFLG---H----HP--NVLLISPLGYLYFLLLLKNADLVLTDSG------GI-QEEASFLGVPVLNLRD 304 (363)
T ss_pred Hhhcc---C----CC--CEEEECCcCHHHHHHHHHcCcEEEEcCc------cH-HhhhhhcCCCEEeeCC
Confidence 22221 0 13 4666531122334556899999998762 44 6778888898887754
No 107
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=79.05 E-value=6.8 Score=33.83 Aligned_cols=33 Identities=3% Similarity=0.014 Sum_probs=26.4
Q ss_pred HHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHH
Q 005402 654 EAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYA 686 (698)
Q Consensus 654 ~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~ 686 (698)
.+..|++++.++..++-... ..|+|+..++++.
T Consensus 58 ~ll~~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 58 YLLENPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 34478999999999887654 5999999998865
No 108
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=76.28 E-value=11 Score=41.94 Aligned_cols=114 Identities=13% Similarity=0.046 Sum_probs=68.2
Q ss_pred HHHHhCCCCCCCCceeeec--cccch-hhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHH
Q 005402 409 IKEKTGYSVSPDAMFDIQV--KRIHE-YKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVK 485 (698)
Q Consensus 409 l~~~~g~~~~~~~~~~~~v--~R~~~-yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk 485 (698)
.++++|+ +++.+++..+ +|.++ -|.... +++.+.++.+- ....++++.+-..+....
T Consensus 181 ~r~~lgl--~~~~~~Ilvl~GSR~aei~k~~~~-ll~a~~~l~~~-----------~p~~~~vi~~~~~~~~~~------ 240 (385)
T TIGR00215 181 AREKLGI--DHNGETLALLPGSRGSEVEKLFPL-FLKAAQLLEQQ-----------EPDLRRVLPVVNFKRRLQ------ 240 (385)
T ss_pred HHHHcCC--CCCCCEEEEECCCCHHHHHHhHHH-HHHHHHHHHHh-----------CCCeEEEEEeCCchhHHH------
Confidence 4556775 4556665543 79998 455556 66666665431 114667665543332222
Q ss_pred HHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccc
Q 005402 486 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGAN 560 (698)
Q Consensus 486 ~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~ 560 (698)
+.++.+... ... +|.++.+ ++ +.++++||+.+-+| ||+-+-+|..|.+.|.+..--|
T Consensus 241 -~~~~~~~~~----~~~--~v~~~~~-~~---~~~l~aADl~V~~S-------Gt~tlEa~a~G~P~Vv~yk~~p 297 (385)
T TIGR00215 241 -FEQIKAEYG----PDL--QLHLIDG-DA---RKAMFAADAALLAS-------GTAALEAALIKTPMVVGYRMKP 297 (385)
T ss_pred -HHHHHHHhC----CCC--cEEEECc-hH---HHHHHhCCEEeecC-------CHHHHHHHHcCCCEEEEEcCCH
Confidence 222222111 112 5666654 43 35889999999776 9999999999999987654333
No 109
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=53.18 E-value=34 Score=39.12 Aligned_cols=47 Identities=9% Similarity=0.079 Sum_probs=44.4
Q ss_pred eEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceee
Q 005402 505 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILI 553 (698)
Q Consensus 505 kvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~i 553 (698)
.|+..++|.......++.-||++|.+|. .|.=|.+-|.|+-+|.+.+
T Consensus 329 nvvly~~~~~~~l~~ly~~~dlyLdin~--~e~~~~al~eA~~~G~pI~ 375 (438)
T TIGR02919 329 NVKLYPNITTQKIQELYQTCDIYLDINH--GNEILNAVRRAFEYNLLIL 375 (438)
T ss_pred CcEEECCcChHHHHHHHHhccEEEEccc--cccHHHHHHHHHHcCCcEE
Confidence 5999999999778899999999999999 9999999999999999887
No 110
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=32.09 E-value=47 Score=30.86 Aligned_cols=39 Identities=26% Similarity=0.354 Sum_probs=29.5
Q ss_pred CccceEecCCCc---ccchHHHHHHHHHHhcCCCHHHHHHHhccce
Q 005402 241 PEKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRTV 283 (698)
Q Consensus 241 ~~~~~ihlNE~H---pa~~i~El~R~l~d~~gl~~~~A~~iv~~~~ 283 (698)
+.++.+|+..|. +++++.-||+ ..|+++++|++.+++.-
T Consensus 78 ~~~VlVHC~~G~~RS~~v~~~yl~~----~~~~~~~~A~~~v~~~R 119 (138)
T smart00195 78 GGKVLVHCQAGVSRSATLIIAYLMK----YRNLSLNDAYDFVKDRR 119 (138)
T ss_pred CCeEEEECCCCCchHHHHHHHHHHH----HhCCCHHHHHHHHHHHC
Confidence 468899999986 3455554454 67999999999988654
No 111
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=31.05 E-value=53 Score=30.23 Aligned_cols=38 Identities=32% Similarity=0.373 Sum_probs=29.4
Q ss_pred CccceEecCCCc---ccchHHHHHHHHHHhcCCCHHHHHHHhccc
Q 005402 241 PEKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 282 (698)
Q Consensus 241 ~~~~~ihlNE~H---pa~~i~El~R~l~d~~gl~~~~A~~iv~~~ 282 (698)
+.++++|++.|+ +++++..+|+ ..++++++|++.+|+.
T Consensus 81 ~~~vlVHC~~G~~Rs~~~~~~~l~~----~~~~~~~~a~~~vr~~ 121 (139)
T cd00127 81 GGKVLVHCLAGVSRSATLVIAYLMK----TLGLSLREAYEFVKSR 121 (139)
T ss_pred CCcEEEECCCCCchhHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 467899999998 3455555554 5699999999998875
No 112
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]
Probab=30.38 E-value=6e+02 Score=29.67 Aligned_cols=137 Identities=16% Similarity=0.193 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHH
Q 005402 400 EESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ 479 (698)
Q Consensus 400 ~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~ 479 (698)
-.+..+.++|.++++++.... .|+.|+....+.+...- -..++++.+.||=.+--..
T Consensus 257 L~~q~~~e~l~~~L~L~~~~~-------------~~~~l~~W~~~~~~~d~----------~~~~V~IalVGKYt~l~Ds 313 (585)
T KOG2387|consen 257 LEEQGIVEYLNRRLGLSIISS-------------ERPMLDKWSNMAERYDD----------LQVPVRIALVGKYTKLSDS 313 (585)
T ss_pred HhhhhHHHHHHHHhCCCcccc-------------chhhHHHHHHHHHhhhc----------ccCcEEEEEEeccccchHH
Confidence 456678899999998753221 12455444444333221 1248999999998887777
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCH------------HHHHhhccccccccccCCCcccCCCchhhHHH-
Q 005402 480 AKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNV------------SVAELLIPASELSQHISTAGMEASGTSNMKFA- 546 (698)
Q Consensus 480 ~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~------------~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~- 546 (698)
--.++|-+..-|-.++ .||.|.+++.=+. .-|-.++.+||=.|-|.- |-.-|+++|..+
T Consensus 314 Y~Sv~KAL~Ha~~~~~------~kl~i~wi~s~dLE~~t~~e~~~~~~~aW~~l~~adGilvPGG--FG~RGveG~i~Aa 385 (585)
T KOG2387|consen 314 YLSVVKALEHAALAIN------RKLEIVWIDSSDLEPETEQEDPRKYHAAWQKLKSADGILVPGG--FGDRGVEGKILAA 385 (585)
T ss_pred HHHHHHHHHHHHHHhc------ccceEEEEehhcccccccccChhHHHHHHHHhccCCeEEeCCc--ccccchhHHHHHH
Confidence 7778888877776543 5778988876443 346678889999999987 999999999754
Q ss_pred ----hcCceeeeeccc---cchhhhhhc
Q 005402 547 ----MNGCILIGTLDG---ANVEIRQEV 567 (698)
Q Consensus 547 ----~NG~l~ist~DG---w~vEi~~~~ 567 (698)
-|+.+-+|+.=| +.||++|.+
T Consensus 386 k~ARen~iP~LGiCLGmQ~AvIEfaRnv 413 (585)
T KOG2387|consen 386 KWARENKIPFLGICLGMQLAVIEFARNV 413 (585)
T ss_pred HHHHhcCCCeEeeehhhhHHHHHHHHHh
Confidence 489999998777 567887776
No 113
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=30.17 E-value=1.1e+02 Score=32.99 Aligned_cols=69 Identities=9% Similarity=-0.011 Sum_probs=43.9
Q ss_pred eEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhH-----------HHhcCceeeeeccccchhhhhhccCccee
Q 005402 505 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMK-----------FAMNGCILIGTLDGANVEIRQEVGEENFF 573 (698)
Q Consensus 505 kvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mk-----------a~~NG~l~ist~DGw~vEi~~~~G~~N~~ 573 (698)
+|.|+.-..-+--..++++ |+.|-.... ...|+-+.+ +|..|.+.|++.+|+..|++++. .+||
T Consensus 208 ~V~f~G~~~~eel~~~l~~-~~gLv~~~~--~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~--~~G~ 282 (333)
T PRK09814 208 NISYKGWFDPEELPNELSK-GFGLVWDGD--TNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVEN--GLGF 282 (333)
T ss_pred CeEEecCCCHHHHHHHHhc-CcCeEEcCC--CCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhC--CceE
Confidence 6878765544444444444 665533221 111222222 49999999999999999999885 6889
Q ss_pred ecccc
Q 005402 574 LFGAR 578 (698)
Q Consensus 574 ~fG~~ 578 (698)
++...
T Consensus 283 ~v~~~ 287 (333)
T PRK09814 283 VVDSL 287 (333)
T ss_pred EeCCH
Confidence 98743
No 114
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=28.55 E-value=6.9e+02 Score=27.58 Aligned_cols=68 Identities=13% Similarity=0.058 Sum_probs=46.8
Q ss_pred eEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhh
Q 005402 505 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIA 583 (698)
Q Consensus 505 kvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~ 583 (698)
+|.+++.-+-.--..+++.||+.+-.|. +|. --|+.-|++.|+.. -+.|+++.. .|....|...+.|.
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS-----ggi--~EA~~lg~Pvv~l~--~R~e~~~~g--~nvl~vg~~~~~I~ 330 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS-----SGI--IEAPSFGVPTINIG--TRQKGRLRA--DSVIDVDPDKEEIV 330 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh-----hHH--HhhhhcCCCEEeec--CCchhhhhc--CeEEEeCCCHHHHH
Confidence 5889997777777778899999995554 333 46888999888654 477776443 45554565555554
No 115
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=23.99 E-value=80 Score=28.97 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=29.7
Q ss_pred ccceEecCCCc---ccchHHHHHHHHHHhcCCCHHHHHHHhccc
Q 005402 242 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 282 (698)
Q Consensus 242 ~~~~ihlNE~H---pa~~i~El~R~l~d~~gl~~~~A~~iv~~~ 282 (698)
.++.||+.-|. |++++.-||+ ..++++++|++.+++.
T Consensus 74 ~~VlVHC~~G~~RS~~v~~ayLm~----~~~~~~~~A~~~v~~~ 113 (133)
T PF00782_consen 74 GKVLVHCKAGLSRSGAVAAAYLMK----KNGMSLEEAIEYVRSR 113 (133)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHH----HHTSSHHHHHHHHHHH
T ss_pred ceeEEEeCCCcccchHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 46799999998 6666665554 6799999999998765
No 116
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=23.70 E-value=3.3e+02 Score=30.74 Aligned_cols=110 Identities=18% Similarity=0.143 Sum_probs=69.1
Q ss_pred CCCCCceeeec--cccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhh
Q 005402 417 VSPDAMFDIQV--KRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATV 494 (698)
Q Consensus 417 ~~~~~~~~~~v--~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~i 494 (698)
++++.++++.. +|-.|=||..--++..+.++.+- ...++|++.. +.+.+.. . +.++.+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~-----------~p~l~fvvp~-a~~~~~~---~---i~~~~~~- 240 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQ-----------RPDLQFVVPV-APEVHEE---L---IEEILAE- 240 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh-----------CCCeEEEEec-CCHHHHH---H---HHHHHHh-
Confidence 56788888876 99999998854255666665432 1257888774 3333322 2 2222221
Q ss_pred cCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccch
Q 005402 495 NHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV 561 (698)
Q Consensus 495 n~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~v 561 (698)
.. ..+.+.++++ -.+.++++||+-+ =+|||..+-+++.|++.|...---|+
T Consensus 241 -~~----~~~~~~~~~~----~~~~~m~~ad~al-------~~SGTaTLE~Al~g~P~Vv~Yk~~~l 291 (373)
T PF02684_consen 241 -YP----PDVSIVIIEG----ESYDAMAAADAAL-------AASGTATLEAALLGVPMVVAYKVSPL 291 (373)
T ss_pred -hC----CCCeEEEcCC----chHHHHHhCcchh-------hcCCHHHHHHHHhCCCEEEEEcCcHH
Confidence 11 1235555554 2455678888765 46999999999999999976554443
No 117
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=22.33 E-value=2.5e+02 Score=32.82 Aligned_cols=40 Identities=18% Similarity=0.087 Sum_probs=28.5
Q ss_pred ccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCc
Q 005402 38 SQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGL 79 (698)
Q Consensus 38 ~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~Gy 79 (698)
.-|..+=+=.||||--.++.=|.+++.|. ..--++=.|+.
T Consensus 7 ~~E~~p~vK~GGLaDv~~alpk~L~~~g~--~v~v~lP~y~~ 46 (487)
T COG0297 7 ASEIFPFVKTGGLADVVGALPKALAKRGV--DVRVLLPSYPK 46 (487)
T ss_pred eeeecCccccCcHHHHHHHhHHHHHhcCC--eEEEEcCCchh
Confidence 34555557789999999999999999993 33344444543
Done!