Query 005402
Match_columns 698
No_of_seqs 199 out of 1368
Neff 5.5
Searched_HMMs 29240
Date Tue Mar 26 00:20:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005402.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005402hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 8E-195 3E-199 1664.9 46.1 679 1-696 104-879 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 2E-183 7E-188 1579.5 54.0 679 1-698 76-822 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 7E-182 2E-186 1562.5 50.3 668 1-694 66-796 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 5E-179 2E-183 1539.1 48.9 663 1-698 67-794 (796)
5 3vue_A GBSS-I, granule-bound s 100.0 7.9E-28 2.7E-32 271.7 23.2 205 400-692 306-511 (536)
6 2qzs_A Glycogen synthase; glyc 99.5 2.2E-13 7.6E-18 148.5 18.5 205 400-692 271-476 (485)
7 1rzu_A Glycogen synthase 1; gl 99.5 2.7E-13 9.3E-18 147.9 18.8 202 400-690 271-473 (485)
8 3nb0_A Glycogen [starch] synth 99.4 4.1E-12 1.4E-16 146.4 16.7 128 501-688 489-629 (725)
9 3fro_A GLGA glycogen synthase; 99.2 1.2E-10 4E-15 123.6 15.8 195 401-692 234-430 (439)
10 3s28_A Sucrose synthase 1; gly 99.1 2.6E-10 9E-15 134.8 14.4 194 411-688 562-765 (816)
11 2x6q_A Trehalose-synthase TRET 99.1 1.1E-09 3.8E-14 116.7 17.3 191 407-691 219-413 (416)
12 3oy2_A Glycosyltransferase B73 99.0 1.9E-09 6.5E-14 114.6 14.5 209 408-692 171-390 (413)
13 1uqt_A Alpha, alpha-trehalose- 99.0 2E-08 6.9E-13 112.2 21.8 130 406-550 245-376 (482)
14 3okp_A GDP-mannose-dependent a 99.0 4E-09 1.4E-13 110.3 14.9 187 406-692 185-379 (394)
15 3c48_A Predicted glycosyltrans 99.0 5.4E-09 1.8E-13 111.8 15.4 193 408-691 232-424 (438)
16 2bfw_A GLGA glycogen synthase; 98.9 1.3E-08 4.5E-13 97.4 13.4 127 406-564 24-154 (200)
17 2jjm_A Glycosyl transferase, g 98.9 8.2E-09 2.8E-13 109.2 12.4 184 408-691 200-384 (394)
18 2r60_A Glycosyl transferase, g 98.9 1.1E-08 3.7E-13 112.2 13.8 199 407-691 245-458 (499)
19 2iw1_A Lipopolysaccharide core 98.9 1.5E-08 5.1E-13 105.4 13.0 185 407-689 184-368 (374)
20 3qhp_A Type 1 capsular polysac 98.8 9.1E-09 3.1E-13 95.8 10.0 163 421-684 2-166 (166)
21 2gek_A Phosphatidylinositol ma 98.7 6.3E-08 2.2E-12 101.8 13.1 175 420-692 207-383 (406)
22 2f9f_A First mannosyl transfer 98.6 1.9E-07 6.4E-12 88.9 10.3 129 415-575 17-145 (177)
23 2iuy_A Avigt4, glycosyltransfe 98.5 4E-07 1.4E-11 94.3 10.5 115 419-566 160-282 (342)
24 3t5t_A Putative glycosyltransf 98.5 4.1E-06 1.4E-10 94.1 19.1 132 407-558 272-408 (496)
25 2vsy_A XCC0866; transferase, g 98.1 3.5E-05 1.2E-09 85.6 15.5 113 410-554 368-481 (568)
26 2x0d_A WSAF; GT4 family, trans 98.0 1.1E-05 3.6E-10 88.0 9.5 114 419-565 239-353 (413)
27 1vgv_A UDP-N-acetylglucosamine 98.0 7.2E-05 2.5E-09 78.2 14.2 119 408-563 193-316 (384)
28 3beo_A UDP-N-acetylglucosamine 97.9 7.1E-05 2.4E-09 77.9 12.9 110 420-563 205-316 (375)
29 1f0k_A MURG, UDP-N-acetylgluco 97.6 0.00018 6.1E-09 74.7 9.7 174 411-688 175-353 (364)
30 2hy7_A Glucuronosyltransferase 97.6 0.00045 1.5E-08 74.5 12.8 94 422-557 223-323 (406)
31 1v4v_A UDP-N-acetylglucosamine 96.5 0.026 8.9E-07 58.8 13.7 102 420-556 198-300 (376)
32 2xci_A KDO-transferase, 3-deox 92.3 0.36 1.2E-05 51.2 9.0 109 422-555 197-308 (374)
33 3dzc_A UDP-N-acetylglucosamine 90.5 2.8 9.7E-05 44.7 13.8 114 406-556 216-333 (396)
34 3ot5_A UDP-N-acetylglucosamine 89.2 3.4 0.00011 44.4 13.1 101 422-556 226-327 (403)
35 3q3e_A HMW1C-like glycosyltran 87.4 4.1 0.00014 46.9 12.9 116 413-558 433-549 (631)
36 3otg_A CALG1; calicheamicin, T 80.6 12 0.0004 38.9 12.0 42 505-556 293-335 (412)
37 4hwg_A UDP-N-acetylglucosamine 79.0 7.6 0.00026 41.5 10.1 136 407-582 192-332 (385)
38 2c4m_A Glycogen phosphorylase; 70.5 1 3.4E-05 53.2 0.5 71 574-689 643-716 (796)
39 1l5w_A Maltodextrin phosphoryl 68.4 1.7 5.7E-05 51.3 1.7 74 574-689 653-727 (796)
40 4fzr_A SSFS6; structural genom 61.3 29 0.00098 36.0 9.5 44 505-557 285-328 (398)
41 2iyf_A OLED, oleandomycin glyc 55.5 39 0.0013 35.4 9.3 43 505-557 284-327 (430)
42 3oti_A CALG3; calicheamicin, T 37.6 2.8E+02 0.0094 28.5 12.4 91 422-555 234-325 (398)
43 2gj4_A Glycogen phosphorylase, 31.4 13 0.00043 44.2 0.8 34 651-687 716-749 (824)
44 3s4e_A Dual specificity protei 30.2 36 0.0012 30.6 3.5 37 242-282 82-121 (144)
45 4gyw_A UDP-N-acetylglucosamine 29.8 6.9E+02 0.024 28.7 15.9 120 505-690 581-706 (723)
46 3ezz_A Dual specificity protei 26.4 47 0.0016 29.6 3.6 37 242-282 82-121 (144)
47 3emu_A Leucine rich repeat and 26.3 42 0.0014 31.0 3.4 37 242-282 88-127 (161)
48 1psw_A ADP-heptose LPS heptosy 24.4 3E+02 0.01 27.5 9.8 46 506-558 243-289 (348)
49 3tsa_A SPNG, NDP-rhamnosyltran 22.9 3.7E+02 0.013 27.2 10.2 41 505-555 271-312 (391)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=8.1e-195 Score=1664.88 Aligned_cols=679 Identities=48% Similarity=0.810 Sum_probs=624.0
Q ss_pred CcccCCcchHHHHHhcCcHHHH-------------HHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCC
Q 005402 1 MEFLQGRALLNAIGNLGLTGAY-------------AEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYP 67 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~-------------~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP 67 (698)
|||||||+|.|||+|||+.+.+ +|||++||+++|+++++|+||+|||||||||||||||||||||+|
T Consensus 104 ~EFL~Gr~L~n~l~nlg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP 183 (879)
T 1ygp_A 104 LEFLMGRALDNALINMKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIP 183 (879)
T ss_dssp SCCCCBCHHHHHHHSCCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhhhHHHHHHHhcCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCC
Confidence 7999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred eEEEeeccCCCcceEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEee--CC-CCCe--eeeCCeeEEEEEEe
Q 005402 68 AWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVP--GS-DGKS--HWIGGEDIKAVAYD 142 (698)
Q Consensus 68 ~~g~GL~Y~~GyF~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~--~~-dg~~--~w~~~~~v~a~~yd 142 (698)
++||||||+||||+|+|.||||+|.||+||.++||||++|++.+++|+|+|+|+. +. +|+. +|++++.|+|+|||
T Consensus 184 ~~GyGlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD 263 (879)
T 1ygp_A 184 AWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYD 263 (879)
T ss_dssp EEEEEECCSSCSCEEEEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEE
T ss_pred eEEEEeeecCCceEEEeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEcc
Confidence 9999999999999999999999999999999999999999999999999999973 34 6755 49999999999999
Q ss_pred ecCCCCCCCCeEEEEEEEecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHH
Q 005402 143 IPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQD 222 (698)
Q Consensus 143 v~i~g~~~~~~~~lrlw~~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~d 222 (698)
+|||||+++++|+||||++++++ .|+|..||.|||.+++++++.+|+||++|||+|++++||++|||||||||+||+||
T Consensus 264 ~Pi~Gy~~~~~n~lRLW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqd 342 (879)
T 1ygp_A 264 FPVPGFKTSNVNNLRLWQARPTT-EFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHD 342 (879)
T ss_dssp EEEECSSCCCEEEEEEEEEEESC-SCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCCCceEEEEEEEeccCc-ccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHH
Confidence 99999999999999999999766 79999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccccCCccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHH
Q 005402 223 IIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFEL 302 (698)
Q Consensus 223 iv~~~~~~~gG~~~l~~l~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l 302 (698)
|||+|++.+ ..|++|+++++|||||||||||||||||+|+|++|++|++||++|+++|+||||||||||||+||++|
T Consensus 343 ilr~~~~~~---~~l~~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l 419 (879)
T 1ygp_A 343 ILRRFKKSK---RPWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRL 419 (879)
T ss_dssp HHHHHHHHT---CCGGGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHH
T ss_pred HHHHHHHhC---CChhhcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHH
Confidence 999999886 37999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHchHHHHHHHHhhHHHHHHHHhhhCCCChhhHHHHHhcceEEeccccc-ccc--eeeccccccCCCCCCC-------
Q 005402 303 MQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLP-ATF--ADLFVKTKESTDVVPD------- 372 (698)
Q Consensus 303 ~~~~lp~~~~ii~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~-~~v--a~l~~~~~~~~~~~~~------- 372 (698)
|+++||||++||++||.+|++.+.+++|+ +.+.+.+||++++ +.. ++| |+||+.+|+.+|++..
T Consensus 420 ~~~lLpr~~~II~ein~~f~~~~~~~~~~-----d~~~~~~l~ii~~-~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k 493 (879)
T 1ygp_A 420 FGHLLPRHLEIIYDINWFFLEDVAKKFPK-----DVDLLSRISIIEE-NSPERQIRMAFLAIVGSHKVNGVVELHSELIK 493 (879)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHSTT-----CTHHHHHHCSEEC-CSSSCEEEHHHHHHHHEEEEEESSHHHHHHHH
T ss_pred HHHHCCcHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHhcceecc-CCCcceeehHHHHHHhcCceeEehHHHHHHHH
Confidence 99999999999999999999999999998 6788889999887 433 556 9999998887776511
Q ss_pred -------------cccccccccCCCchhh-------h-------------------------hhhhh--------cCCCH
Q 005402 373 -------------DELENCDEEGGPVDEE-------L-------------------------ESAQE--------DGVLE 399 (698)
Q Consensus 373 -------------~~i~~~t~g~h~~~~~-------l-------------------------~k~~t--------ngi~~ 399 (698)
.++.++|||+|.. ++ | ++|.. ..++.
T Consensus 494 ~~~f~df~~l~P~~kf~n~TNGVt~r-rWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~ 572 (879)
T 1ygp_A 494 TTIFKDFIKFYGPSKFVNVTNGITPR-RWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKL 572 (879)
T ss_dssp HTTTHHHHHHHCGGGEEECCCCBCHH-HHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHH
T ss_pred HHHhHHHHHhCCCCcccCcCCCcCCc-hhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHH
Confidence 1788899999763 11 1 11100 11223
Q ss_pred HHHHHHHHHHHHHh-CCCCC-----CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcC------hhhhhcccCCeEE
Q 005402 400 EESTDVVSFIKEKT-GYSVS-----PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMS------AVERKAKFVPRVC 467 (698)
Q Consensus 400 ~~K~~l~~~l~~~~-g~~~~-----~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~------~~~~~~~~~p~q~ 467 (698)
++|.+|+++|++++ |+.+| |+++||+|||||||||||+||+|++++||.+||+ + |....++.+|+||
T Consensus 573 ~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~~~~~~~p~~~~~~~~P~~~ 651 (879)
T 1ygp_A 573 NNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-MLKNGASIEEVARKYPRKVS 651 (879)
T ss_dssp HHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHSCCEEE
T ss_pred HHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHh-CccccCCCcccccCCCCeEE
Confidence 78999999999999 99999 9999999999999999999999999999999986 4 4322233579999
Q ss_pred EEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHh
Q 005402 468 IFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM 547 (698)
Q Consensus 468 If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~ 547 (698)
||||||||+|..||.|||+|+++|++||+||+++++|||||+|||||++|++|+||||||+|+|+||+||||||||||||
T Consensus 652 IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfal 731 (879)
T 1ygp_A 652 IFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVM 731 (879)
T ss_dssp EEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHT
T ss_pred EEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceeeeeccccchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCC---CHHHHHHhh
Q 005402 548 NGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSY---NYDELMGSL 624 (698)
Q Consensus 548 NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~---~~~~l~~~l 624 (698)
||+|+|||+|||||||++++|++|+|+||.++|+|.+++..++...|+.++++++|+|.+.+|+|++. +|++||++|
T Consensus 732 NGaLtlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~L 811 (879)
T 1ygp_A 732 NGGLIIGTVDGANVEITREIGEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSI 811 (879)
T ss_dssp TTCEEEEESCTHHHHHHHHHCGGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHHH
T ss_pred cCCeeeecccchhHHHHHHcCcccEEEccCCHHHHHHHHHhCchhccCCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988755568889999999999999999754 499999999
Q ss_pred ccCCCCCCCccccccCChhHHHHHHHHHHHHhcCHH-HHHHHHHHHhccCCCCChHHHHHHHHHHHhcccccC
Q 005402 625 EGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK-RWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVE 696 (698)
Q Consensus 625 ~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~d~~-~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~~~~~ 696 (698)
..+ +|+|+|++||+||++||++|..+|.|++ +|.+|++.|||++|+|||||||+|||++||+++|++
T Consensus 812 ~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSSDRtI~eYa~~IW~~~p~~ 879 (879)
T 1ygp_A 812 KYH-----GDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDTIWNVEPVT 879 (879)
T ss_dssp HHS-----TTTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHHHHHHTTCCCCC-
T ss_pred hcC-----CCeEEEeccHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCccCchHHHHHHHHHhhCCCCCC
Confidence 754 7999999999999999999999999999 999999999999999999999999999999999964
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=2.2e-183 Score=1579.47 Aligned_cols=679 Identities=44% Similarity=0.780 Sum_probs=610.4
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF 80 (698)
|||||||+|.|||+|||+.++++|||++||+++|+++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 76 ~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F 155 (824)
T 2gj4_A 76 LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIF 155 (824)
T ss_dssp SCEEEECCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSC
T ss_pred hhhcchhhhHHHHHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 005402 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (698)
Q Consensus 81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~ 160 (698)
+|+|+||||+|.||+||+.+||||++|++.+++|+|+|+|+.+.+| .+|++++.|+|+|||+|||||+++++|+||||+
T Consensus 156 ~Q~i~dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g-~~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~ 234 (824)
T 2gj4_A 156 NQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG-AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWS 234 (824)
T ss_dssp EEEEETTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSS-EEEESCEEEEEEEEEEEEECSSSSCEEEEEEEE
T ss_pred eEEeeCCEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCC-ceecccceEEEeeccCCcCCCCCCceEEEEEEE
Confidence 9999999999999999999999999999999999999999866778 379999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCC-----c
Q 005402 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGAN-----V 235 (698)
Q Consensus 161 ~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~-----~ 235 (698)
++ +.++|||..||.|+|..++.+++.+++||++|||+|++++||++|||||||||+||+|||||+|++.+-|. .
T Consensus 235 a~-~~~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~ 313 (824)
T 2gj4_A 235 AK-APNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 313 (824)
T ss_dssp EE-CCC----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred ee-cCcccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhcccccccccc
Confidence 99 77789999999999999999999999999999999999999999999999999999999999998764232 3
Q ss_pred ccccCCccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHH
Q 005402 236 NWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIE 315 (698)
Q Consensus 236 ~l~~l~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~ 315 (698)
.|+.|+++++||||||||||+++||||+|+|++|++|++||++|+++|+||||||+|||+|+||.+||+++||+|++||+
T Consensus 314 ~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~ 393 (824)
T 2gj4_A 314 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIY 393 (824)
T ss_dssp CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHH
T ss_pred chhhcCCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHHHHHHHhhhCCCChhhHHHHHhcceEEecccccccc--eeeccccccCCCCCC-------------------Ccc
Q 005402 316 MIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF--ADLFVKTKESTDVVP-------------------DDE 374 (698)
Q Consensus 316 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v--a~l~~~~~~~~~~~~-------------------~~~ 374 (698)
+||.+|+..+..++|+ +.+.+.++|++++ +..+.| +++++.+|+.++++. ..+
T Consensus 394 ~in~~f~~~~~~~~~~-----~~~~~~~~~~i~~-~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k 467 (824)
T 2gj4_A 394 EINQRFLNRVAAAFPG-----DVDRLRRMSLVEE-GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHK 467 (824)
T ss_dssp HHHHHHHHHHHHHSTT-----CHHHHHHHCSEEC-SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGG
T ss_pred HHHHHHHHHHHHHcCC-----cHHHHHhhhhhhh-cCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhh
Confidence 9999999999999998 6667777888876 434455 777777777555431 126
Q ss_pred cccccccCCCch-----hh-----h------------------hhhhh-c-------CCCHHHHHHHHHHHHHHhCCCCC
Q 005402 375 LENCDEEGGPVD-----EE-----L------------------ESAQE-D-------GVLEEESTDVVSFIKEKTGYSVS 418 (698)
Q Consensus 375 i~~~t~g~h~~~-----~~-----l------------------~k~~t-n-------gi~~~~K~~l~~~l~~~~g~~~~ 418 (698)
+.++|||+|..+ +. + .+|.. . .++.++|.+++++|++++|+.+|
T Consensus 468 ~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vd 547 (824)
T 2gj4_A 468 FQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHIN 547 (824)
T ss_dssp EEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 788899998630 00 1 11110 0 12336888888889999999999
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
|++|||+||||||+||||+||+|+++++|.+|++ +|.. +.+|+||||+|||||+|+.||.|||+|+++|+++|+||
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~-~~~~---~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp 623 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPNK---FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDP 623 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTTS---CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHh-CCCC---CCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999999988999999999886 4442 25689999999999999999999999999999999999
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccc
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGAR 578 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~ 578 (698)
+++++|||+|+|||||++||+|+||||||||||+||+|||||||||||+||+|||||+|||||||.+++|++|||+||..
T Consensus 624 ~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~ 703 (824)
T 2gj4_A 624 VVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR 703 (824)
T ss_dssp TTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC
T ss_pred ccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhccCCCC---CCCChhHHHHHhhhhcCCCCCC---CHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHH
Q 005402 579 AHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV 652 (698)
Q Consensus 579 ~d~V~~~~~~~~~~~---~~~~~~~~~v~~~~~~G~F~~~---~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a 652 (698)
+++|..++..+ |++ |..++.++++++.+.+|+|+.. .|.+||++|.. +|+|||++||+||++||+++
T Consensus 704 ~~ev~~l~~~~-~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~------~D~~~~~~Df~~y~~~q~~v 776 (824)
T 2gj4_A 704 VEDVDRLDQRG-YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH------HDRFKVFADYEEYVKCQERV 776 (824)
T ss_dssp HHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH------CCTTCTGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CCHHHHhcCCHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHc------CChhhhhhhHHHHHHHHHHH
Confidence 99997775443 553 6678999999999999998754 39999999984 59999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcccccCCC
Q 005402 653 DEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 698 (698)
Q Consensus 653 ~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~~~~~~p 698 (698)
..+|.|+++|.+|++.|||.+|+|||||||+||+++||+++|+++|
T Consensus 777 ~~~y~d~~~W~~~~~~nia~~g~FssdRtI~eY~~~iw~~~~~~~~ 822 (824)
T 2gj4_A 777 SALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQR 822 (824)
T ss_dssp HHHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHHTTCCCCCCCC
T ss_pred HHhhcCHHHHHHHHHHHHHHhCCcCcHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999999999999999999999998865
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=7e-182 Score=1562.54 Aligned_cols=668 Identities=42% Similarity=0.707 Sum_probs=613.9
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF 80 (698)
|||||||+|.|||+|||+.++++|||++||+++|+++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 66 ~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F 145 (796)
T 1l5w_A 66 MEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLF 145 (796)
T ss_dssp SCCCCCCCHHHHHHHHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSC
T ss_pred hHHhHHHHHHHHHHhcCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCce
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 005402 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (698)
Q Consensus 81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~ 160 (698)
+|+|.||||+|.||+|++.++|||++|++.+|+|+|+|+|+. + + +|++++.|+|+|||+|||||+++++|+||||+
T Consensus 146 ~Q~i~dG~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~ 221 (796)
T 1l5w_A 146 RQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQ 221 (796)
T ss_dssp EEEEETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEE
T ss_pred eEEecCCeeEEecCccccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEE
Confidence 999999999999999999999999999999999999999973 3 4 79999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCcccccC
Q 005402 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240 (698)
Q Consensus 161 ~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~l 240 (698)
+++++ .|+|..||.|+|..|+++++.+|+||++|||+|++++||++|||||||||+||+|+|+|+|++.++ .|++|
T Consensus 222 a~~~~-~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~~~~l 297 (796)
T 1l5w_A 222 ATHAH-PFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAGR---KLHEL 297 (796)
T ss_dssp EECSS-CCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CGGGH
T ss_pred eccCc-ccChhhcCCccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC---Chhhc
Confidence 99766 799999999999999999999999999999999999999999999999999999999999998863 68888
Q ss_pred CccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhHH
Q 005402 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEE 320 (698)
Q Consensus 241 ~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~~ 320 (698)
+++++||||||||||+++||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||+|++||++||.+
T Consensus 298 ~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~ 377 (796)
T 1l5w_A 298 ADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTR 377 (796)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCChhhHHHHHhcceEEecccccccc--eeeccccccCCCCCCC-------------------ccccccc
Q 005402 321 LVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF--ADLFVKTKESTDVVPD-------------------DELENCD 379 (698)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v--a~l~~~~~~~~~~~~~-------------------~~i~~~t 379 (698)
|++.+..++|. +...+.++|++.+ + +| +++++.+|+.++++.. -.+.++|
T Consensus 378 f~~~~~~~~~~-----~~~~~~~~~i~~~-~---~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iT 448 (796)
T 1l5w_A 378 FKTLVEKTWPG-----DEKVWAKLAVVHD-K---QVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVT 448 (796)
T ss_dssp HHHHHHHHSTT-----CHHHHHHHCSEET-T---EEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECC
T ss_pred HHHHHHHhcCC-----cHHHHhhhhcccC-C---cccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCc
Confidence 99999999998 6677777787655 3 33 6677766664444311 1477888
Q ss_pred ccCCCch-----hh-----h------------------hhhhhc--------CCCHHHHHHHHHHHHHHhCCCCCCCCce
Q 005402 380 EEGGPVD-----EE-----L------------------ESAQED--------GVLEEESTDVVSFIKEKTGYSVSPDAMF 423 (698)
Q Consensus 380 ~g~h~~~-----~~-----l------------------~k~~tn--------gi~~~~K~~l~~~l~~~~g~~~~~~~~~ 423 (698)
||+|..+ +. + ++|..+ .++.++|++|+++|++++|+.+||++||
T Consensus 449 NGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~ 528 (796)
T 1l5w_A 449 NGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIF 528 (796)
T ss_dssp CCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEE
T ss_pred CCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcce
Confidence 9997630 00 1 111110 1233778899999999999999999999
Q ss_pred eeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCCc
Q 005402 424 DIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDL 503 (698)
Q Consensus 424 ~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~~ 503 (698)
|+||||||+||||+||+|+++++|.+||+ +|... ..|+||||+|||||+|+.||.|||+|+++|++||+||.++++
T Consensus 529 ~~~vkRl~eYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~ 604 (796)
T 1l5w_A 529 DIQIKRLHEYKRQHLNLLHILALYKEIRE-NPQAD---RVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDK 604 (796)
T ss_dssp EEEESCCCGGGTHHHHHHHHHHHHHHHHT-CTTCC---CCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGG
T ss_pred EeeeecchhhcccCEeHHHHHHHHHHHhc-CCCCC---CCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCc
Confidence 99999999999999999999999999986 54432 469999999999999999999999999999999999999999
Q ss_pred ceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhh
Q 005402 504 LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIA 583 (698)
Q Consensus 504 lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~ 583 (698)
|||+|+|||||++||+|+||||||||||+||+|||||||||||+||+||||||||||+||.+++|++|||+||.++++|.
T Consensus 605 lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~ 684 (796)
T 1l5w_A 605 LKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVK 684 (796)
T ss_dssp EEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHH
T ss_pred eEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCC---CCCChhHHHHHhhhhcCCCCCC---CHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc
Q 005402 584 GLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 657 (698)
Q Consensus 584 ~~~~~~~~~~---~~~~~~~~~v~~~~~~G~F~~~---~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~ 657 (698)
+++..+ |++ |..++.++++++.+.+|.|+.. .+.+||++|.. +++|+|+|++||+||++||++|..+|.
T Consensus 685 ~l~~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~----~~~D~~~v~~Df~~y~~~q~~v~~~Y~ 759 (796)
T 1l5w_A 685 AILAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGK----QGGDPYLVMADFAAYVEAQKQVDVLYR 759 (796)
T ss_dssp HHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHHHTST----TTCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcc-cCHHHHhhcCHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHhc----cCCCceeehhhHHHHHHHHHHHHHHhh
Confidence 988764 553 5667899999999999998754 49999999973 126999999999999999999999999
Q ss_pred CHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcccc
Q 005402 658 DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 694 (698)
Q Consensus 658 d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~~~ 694 (698)
|+++|.+|++.|||++|+|||||||+|||++||+++|
T Consensus 760 d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~P 796 (796)
T 1l5w_A 760 DQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR 796 (796)
T ss_dssp SHHHHHHHHHHHHHHCGGGBHHHHHHHHHHHTTTSCC
T ss_pred CHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999987
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=4.6e-179 Score=1539.08 Aligned_cols=663 Identities=42% Similarity=0.688 Sum_probs=605.4
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (698)
Q Consensus 1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF 80 (698)
|||||||+|.|||+|||+.++++|||++||+++|+++++|+||+|||||||||||||||||||||+|++||||||+||||
T Consensus 67 ~Efl~gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F 146 (796)
T 2c4m_A 67 AEFLMGRALLNNLTNLGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLF 146 (796)
T ss_dssp SCCCCBCSHHHHHHHTTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSC
T ss_pred hhhcchhhhhhHHHhcccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCe
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 005402 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (698)
Q Consensus 81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~ 160 (698)
+|+|.||||+|.||+|++.+||||++|++.+++|+|+|+ .|.|+|||+|+|||+++++|+||||+
T Consensus 147 ~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~ 211 (796)
T 2c4m_A 147 RQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWK 211 (796)
T ss_dssp EEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEE
T ss_pred EEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEe
Confidence 999999999999999999999999999999999999985 36789999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCcccccC
Q 005402 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240 (698)
Q Consensus 161 ~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~~l~~l 240 (698)
+++++ .|+|..||.|+|.+|+++++.+|+||++|||+|++++||++|||||||||+||+|||+|+|++.+| .|+.|
T Consensus 212 a~~~~-~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~---~l~~l 287 (796)
T 2c4m_A 212 AEPWE-EFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK---DLSNF 287 (796)
T ss_dssp EEESS-SSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---CSTTH
T ss_pred ccccc-ccchhhccCcchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC---Chhhc
Confidence 99655 799999999999999999999999999999999999999999999999999999999999998864 68888
Q ss_pred CccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHHHhhHH
Q 005402 241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEE 320 (698)
Q Consensus 241 ~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~~i~~~ 320 (698)
+++++||||||||||+++||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||+|+++|++||.+
T Consensus 288 ~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~ 367 (796)
T 2c4m_A 288 AEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRR 367 (796)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCChhhHHHHHhcceEEecccccccc--eeeccccccCCCCCC-------------------Cccccccc
Q 005402 321 LVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF--ADLFVKTKESTDVVP-------------------DDELENCD 379 (698)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v--a~l~~~~~~~~~~~~-------------------~~~i~~~t 379 (698)
|+..+..+ |+ +.+.+.++|++.+ + +| +++++.+|+.++++. ...+.++|
T Consensus 368 ~~~~~~~~-~~-----~~~~~~~~~i~~~-~---~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iT 437 (796)
T 2c4m_A 368 FRLERAAD-GL-----DEETINRMAPIQH-G---TVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKT 437 (796)
T ss_dssp HHHHHHHT-TC-----CHHHHHHHCSEET-T---EEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECC
T ss_pred HHHHHHhc-CC-----cHhhhhcccceeC-C---cccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCcccccccc
Confidence 99999988 88 6777778887755 3 33 667776666444431 12577889
Q ss_pred ccCCCch-----hh-----h-h------------------hhhhc--------CCCHHHHHHHHHHHHHHhCCCCCCCCc
Q 005402 380 EEGGPVD-----EE-----L-E------------------SAQED--------GVLEEESTDVVSFIKEKTGYSVSPDAM 422 (698)
Q Consensus 380 ~g~h~~~-----~~-----l-~------------------k~~tn--------gi~~~~K~~l~~~l~~~~g~~~~~~~~ 422 (698)
||+|..+ +. + + +|..+ .++.++|++|+++|++++|+.+||++|
T Consensus 438 NGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l 517 (796)
T 2c4m_A 438 NGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESI 517 (796)
T ss_dssp CCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSE
T ss_pred CCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 9998640 00 1 1 11100 123378889999999999999999999
Q ss_pred eeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCCC
Q 005402 423 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 502 (698)
Q Consensus 423 ~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~~ 502 (698)
||+||||||+||||+||+|+++++|.+||+ +|... ..|+||||+|||||+|+.||.|||+|+++|++||+||.+++
T Consensus 518 ~~~~vkRlheYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 518 FDVQIKRLHEYKRQLMNALYVLDLYFRIKE-DGLTD---IPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp EEEEECCCCGGGTHHHHHHHHHHHHHHHHT-SCCCS---SCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred EEEEeecchhhcccCEeHHHHHHHHHHHhh-CCCCC---CCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCC
Confidence 999999999999999999999999999986 44322 46999999999999999999999999999999999999999
Q ss_pred cceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhh
Q 005402 503 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEI 582 (698)
Q Consensus 503 ~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V 582 (698)
+|||+|+|||||++||+|+||||||||||+||+|||||||||||+||+||||||||||+||.+++|++|||+||.++++|
T Consensus 594 ~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev 673 (796)
T 2c4m_A 594 LLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEEL 673 (796)
T ss_dssp TEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTH
T ss_pred ceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCC---CCCChhHHHHHhhhhcCCCCCCC---HHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHh
Q 005402 583 AGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY 656 (698)
Q Consensus 583 ~~~~~~~~~~~---~~~~~~~~~v~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y 656 (698)
.+++.. |++ |..++.++++++.+.+|.|+..+ +.+||++|..+.+++++|+|||++||+||++||++|.++|
T Consensus 674 ~~l~~~--y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~~~~~~~D~~~~~~Df~~y~~~q~~v~~~y 751 (796)
T 2c4m_A 674 PALRES--YKPYELYETVPGLKRALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMAADY 751 (796)
T ss_dssp HHHHHT--CCHHHHHHHSTTHHHHHHTTTSSSSCCTTCCHHHHHHHHHHSCCGGGCSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh--hChHHHhhcCHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcccCCCCCcchhhhhHHHHHHHHHHHHHHH
Confidence 999876 664 66678899999999999987543 9999999963111234699999999999999999999998
Q ss_pred -cCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcccccCCC
Q 005402 657 -CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 698 (698)
Q Consensus 657 -~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~~~~~~p 698 (698)
.|+++|.+|++.|||++|+|||||||+|||++||+++|+++|
T Consensus 752 ~~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~~~~~~ 794 (796)
T 2c4m_A 752 ASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPTPAV 794 (796)
T ss_dssp HHCHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHTTCCCCCCC-
T ss_pred HHCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCCCCcC
Confidence 999999999999999999999999999999999999998764
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.96 E-value=7.9e-28 Score=271.72 Aligned_cols=205 Identities=12% Similarity=0.123 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHH
Q 005402 400 EESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ 479 (698)
Q Consensus 400 ~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~ 479 (698)
+.|..+++.+++++|+..|++.|++++|+|++++||.++ +++++.++.+ .+.|+++.|.|.+.++.
T Consensus 306 ~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~l~~-------------~~~~l~l~G~G~~~~~~ 371 (536)
T 3vue_A 306 EAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDV-MAAAIPELMQ-------------EDVQIVLLGTGKKKFEK 371 (536)
T ss_dssp HHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHH-HHHHHHHHTT-------------SSCEEEEECCBCHHHHH
T ss_pred hhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHH-HHHHHHHhHh-------------hCCeEEEEeccCchHHH
Confidence 789999999999999999999999999999999999999 9999887632 15799999999887776
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecccc
Q 005402 480 AKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA 559 (698)
Q Consensus 480 ~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw 559 (698)
. +...+.. +++ +|.|...++.+..+.++++||++++||+ +|+||+++|.||.+|+++|+|..|.
T Consensus 372 ~------~~~~~~~------~~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG 435 (536)
T 3vue_A 372 L------LKSMEEK------YPG--KVRAVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGG 435 (536)
T ss_dssp H------HHHHHHH------STT--TEEEECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTH
T ss_pred H------HHHHHhh------cCC--ceEEEEeccHHHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCC
Confidence 5 5556653 345 8999999999999999999999999999 9999999999999999999999999
Q ss_pred chhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccc
Q 005402 560 NVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLV 638 (698)
Q Consensus 560 ~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v 638 (698)
..|+++. ++|||.|+.. ..+|+ |.+.|.++|.++|.
T Consensus 436 ~~e~V~d--g~~G~~~~~~----------------------------~~~g~l~~~~d~~~la~ai~------------- 472 (536)
T 3vue_A 436 LVDTVIE--GKTGFHMGRL----------------------------SVDCKVVEPSDVKKVAATLK------------- 472 (536)
T ss_dssp HHHHCCB--TTTEEECCCC----------------------------CSCTTCCCHHHHHHHHHHHH-------------
T ss_pred chheeeC--CCCccccccC----------------------------CCceeEECCCCHHHHHHHHH-------------
Confidence 9998865 3788888754 14455 66677888888886
Q ss_pred cCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005402 639 GKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 639 ~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~ 692 (698)
++..+|.+ +.|.++++++|+ .+|||++++++|.+..-.+
T Consensus 473 ------------ral~~~~~-~~~~~~~~~am~--~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 473 ------------RAIKVVGT-PAYEEMVRNCMN--QDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp ------------HHHHHTTS-HHHHHHHHHHHH--SCCSSHHHHHHHHHHHHTT
T ss_pred ------------HHHHhcCc-HHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHh
Confidence 89999965 479999999998 5999999999998765554
No 6
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.52 E-value=2.2e-13 Score=148.54 Aligned_cols=205 Identities=14% Similarity=0.134 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHH
Q 005402 400 EESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ 479 (698)
Q Consensus 400 ~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~ 479 (698)
..|...+..+++++|++.+++.++++++.|+..+|+.++ ++.++.++.+ .++++++.|.+.+.+..
T Consensus 271 ~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~-------------~~~~l~ivG~g~~~~~~ 336 (485)
T 2qzs_A 271 EDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDL-VLEALPGLLE-------------QGGQLALLGAGDPVLQE 336 (485)
T ss_dssp GGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHH-HHHHHHHHHH-------------TTCEEEEEEEECHHHHH
T ss_pred hHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHH-HHHHHHHHhh-------------CCcEEEEEeCCchHHHH
Confidence 456667788999999875557899999999999999999 9988877643 16799999998654443
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecccc
Q 005402 480 AKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA 559 (698)
Q Consensus 480 ~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw 559 (698)
. +.++++.. ++ +|.++.+|.-+....++++||++++||+ .|++|++-+-||..|++.|+|..|.
T Consensus 337 ~------l~~~~~~~------~~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg 400 (485)
T 2qzs_A 337 G------FLAAAAEY------PG--QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGG 400 (485)
T ss_dssp H------HHHHHHHS------TT--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHH
T ss_pred H------HHHHHHhC------CC--cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCC
Confidence 3 55555531 24 7988889988887899999999999999 9999999999999999999998776
Q ss_pred chhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccc
Q 005402 560 NVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLV 638 (698)
Q Consensus 560 ~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v 638 (698)
..|+++... .+... ....+|+ +.+.|.++|.++|.
T Consensus 401 ~~e~v~~~~----------~~~~~---------------------~~~~~G~l~~~~d~~~la~~i~------------- 436 (485)
T 2qzs_A 401 LADTVSDCS----------LENLA---------------------DGVASGFVFEDSNAWSLLRAIR------------- 436 (485)
T ss_dssp HHHHCCBCC----------HHHHH---------------------TTCCCBEEECSSSHHHHHHHHH-------------
T ss_pred ccceeccCc----------ccccc---------------------ccccceEEECCCCHHHHHHHHH-------------
Confidence 655543310 00000 0013444 44456777777775
Q ss_pred cCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005402 639 GKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 639 ~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~ 692 (698)
++...|.|++.|.++..++.+ ..|||++++++|.+..-.+
T Consensus 437 ------------~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 437 ------------RAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp ------------HHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHh
Confidence 777778899999999999886 6999999999998765443
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.51 E-value=2.7e-13 Score=147.86 Aligned_cols=202 Identities=16% Similarity=0.159 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHH
Q 005402 400 EESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ 479 (698)
Q Consensus 400 ~~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~ 479 (698)
.+|...+..+++++|++-++ .++++++.|+.++|+.++ ++.++.++.+ .++++++.|.+.+.+..
T Consensus 271 ~~~~~~~~~~r~~~~~~~~~-~~~i~~vGrl~~~Kg~~~-li~a~~~l~~-------------~~~~l~ivG~g~~~~~~ 335 (485)
T 1rzu_A 271 KNRALNKKAVAEHFRIDDDG-SPLFCVISRLTWQKGIDL-MAEAVDEIVS-------------LGGRLVVLGAGDVALEG 335 (485)
T ss_dssp TTHHHHHHHHHHHHTCCCSS-SCEEEEESCBSTTTTHHH-HHTTHHHHHH-------------TTCEEEEEECBCHHHHH
T ss_pred hhHHHhHHHHHHhcCCCCCC-CeEEEEEccCccccCHHH-HHHHHHHHHh-------------cCceEEEEeCCchHHHH
Confidence 46777778899999976332 468999999999999999 9998877643 16799999998654443
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecccc
Q 005402 480 AKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA 559 (698)
Q Consensus 480 ~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw 559 (698)
. +.++++.. ++ +|.++.+|.-+....++++||++++||+ .|++|++-+-||..|++.|+|..|.
T Consensus 336 ~------l~~~~~~~------~~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg 399 (485)
T 1rzu_A 336 A------LLAAASRH------HG--RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGG 399 (485)
T ss_dssp H------HHHHHHHT------TT--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHH
T ss_pred H------HHHHHHhC------CC--cEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCC
Confidence 3 55555531 24 7988899988888899999999999999 8999999999999999999998886
Q ss_pred chhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccc
Q 005402 560 NVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLV 638 (698)
Q Consensus 560 ~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v 638 (698)
..|+++... .+.+. ....+|+ |.+.|.++|.++|.
T Consensus 400 ~~e~v~~~~----------~~~~~---------------------~~~~~G~l~~~~d~~~la~~i~------------- 435 (485)
T 1rzu_A 400 LADTVIDAN----------HAALA---------------------SKAATGVQFSPVTLDGLKQAIR------------- 435 (485)
T ss_dssp HHHHCCBCC----------HHHHH---------------------TTCCCBEEESSCSHHHHHHHHH-------------
T ss_pred hhheecccc----------ccccc---------------------ccCCcceEeCCCCHHHHHHHHH-------------
Confidence 666553210 00000 0013444 44456677777775
Q ss_pred cCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Q 005402 639 GKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 690 (698)
Q Consensus 639 ~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw 690 (698)
++..+|.|++.|.++..++.+ ..|||++++++|.+..-
T Consensus 436 ------------~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~ 473 (485)
T 1rzu_A 436 ------------RTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYS 473 (485)
T ss_dssp ------------HHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHH
T ss_pred ------------HHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHH
Confidence 777788999999999999986 69999999999987543
No 8
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.38 E-value=4.1e-12 Score=146.35 Aligned_cols=128 Identities=18% Similarity=0.160 Sum_probs=93.5
Q ss_pred CCcceEEEEcCCCHHH-------HHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCccee
Q 005402 501 GDLLKVIFVPDYNVSV-------AELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 573 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~l-------A~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~ 573 (698)
.++.||+|++.|--.. -..++++||++++||+ +|++|+..|-||..|++.|+|..|
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~g--------------- 551 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGYTPAECTVMGVPSITTNVS--------------- 551 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCHHHHHHHHTTCCEEEETTB---------------
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCHHHHHHHHcCCCEEEeCCC---------------
Confidence 4678999999987653 3667899999999999 999999999999999999977665
Q ss_pred ecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-C---CCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHH
Q 005402 574 LFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-F---GSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQ 649 (698)
Q Consensus 574 ~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F---~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq 649 (698)
|..|.|.+.... -+...+|+ | .+++++++.++|.
T Consensus 552 ---G~~d~V~dg~~~---------------~~~~~tG~lV~~rd~~d~ee~aeaLa------------------------ 589 (725)
T 3nb0_A 552 ---GFGSYMEDLIET---------------NQAKDYGIYIVDRRFKAPDESVEQLV------------------------ 589 (725)
T ss_dssp ---HHHHHHHTTSCH---------------HHHHHTTEEEECCSSSCHHHHHHHHH------------------------
T ss_pred ---Chhhhhhccccc---------------cCCCCceEEEeCCCCCCHHHHHHHHH------------------------
Confidence 455666543110 00135675 4 2456777777776
Q ss_pred HHHHHHhc--CHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 005402 650 EKVDEAYC--DQKRWTRMSIMNTAGSSKFSSDRTIQEYARD 688 (698)
Q Consensus 650 ~~a~~~Y~--d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~ 688 (698)
++...|. ++..+.++..++...+..|||++++++|.+.
T Consensus 590 -~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~ 629 (725)
T 3nb0_A 590 -DYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKA 629 (725)
T ss_dssp -HHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHH
T ss_pred -HHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 6666554 4555566666664445699999999999864
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.22 E-value=1.2e-10 Score=123.57 Aligned_cols=195 Identities=15% Similarity=0.117 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCceeeeccccc-hhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHH
Q 005402 401 ESTDVVSFIKEKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ 479 (698)
Q Consensus 401 ~K~~l~~~l~~~~g~~~~~~~~~~~~v~R~~-~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~ 479 (698)
.+......+++++|+ +++ +.++++.|+. .+|+.++ ++..+.++.+-. . ..++++++.|.+.+.|..
T Consensus 234 ~~~~~~~~~~~~~~~--~~~-~~i~~~G~~~~~~Kg~~~-li~a~~~l~~~~----~-----~~~~~l~i~G~g~~~~~~ 300 (439)
T 3fro_A 234 SRDERKKSLLSKFGM--DEG-VTFMFIGRFDRGQKGVDV-LLKAIEILSSKK----E-----FQEMRFIIIGKGDPELEG 300 (439)
T ss_dssp CHHHHHHHHHHHHTC--CSC-EEEEEECCSSCTTBCHHH-HHHHHHHHHTSG----G-----GGGEEEEEECCCCHHHHH
T ss_pred hhhhhHHHHHHHcCC--CCC-cEEEEEcccccccccHHH-HHHHHHHHHhcc----c-----CCCeEEEEEcCCChhHHH
Confidence 467777889999997 455 9999999999 9999999 999888875420 0 026899999999866555
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCcceEEEEcC-CCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc
Q 005402 480 AKRIVKFITDVGATVNHDPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 558 (698)
Q Consensus 480 ~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG 558 (698)
. +.++++. . + +++++.+ .+.+-...++++||++++||+ .|++|++-+-||..|.+.|+|..|
T Consensus 301 ~------l~~~~~~---~---~---~~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s~~~ 363 (439)
T 3fro_A 301 W------ARSLEEK---H---G---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVG 363 (439)
T ss_dssp H------HHHHHHH---C---T---TEEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEESST
T ss_pred H------HHHHHhh---c---C---CEEEEcCCCCHHHHHHHHHHCCEEEeCCC--CCCccHHHHHHHHCCCCeEEcCCC
Confidence 5 6677663 2 1 3555566 778888889999999999999 899999999999999999999877
Q ss_pred cchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccc
Q 005402 559 ANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLV 638 (698)
Q Consensus 559 w~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v 638 (698)
...|+++. .+|++ +.+.|.+++.++|.
T Consensus 364 ~~~e~~~~---~~g~~-------------------------------------~~~~d~~~la~~i~------------- 390 (439)
T 3fro_A 364 GLRDIITN---ETGIL-------------------------------------VKAGDPGELANAIL------------- 390 (439)
T ss_dssp HHHHHCCT---TTCEE-------------------------------------ECTTCHHHHHHHHH-------------
T ss_pred CcceeEEc---CceEE-------------------------------------eCCCCHHHHHHHHH-------------
Confidence 55554421 12322 33345566665554
Q ss_pred cCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005402 639 GKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 639 ~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~ 692 (698)
++... |++.+.++..++......|||++.+++|.+.+-.+
T Consensus 391 ------------~ll~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 391 ------------KALEL--SRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp ------------HHHHH--TTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTC
T ss_pred ------------HHHhc--CHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Confidence 33321 67778888877776545799999999999876654
No 10
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.13 E-value=2.6e-10 Score=134.79 Aligned_cols=194 Identities=13% Similarity=0.072 Sum_probs=143.9
Q ss_pred HHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCc---cCHHHHHHHHHH
Q 005402 411 EKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA---TYVQAKRIVKFI 487 (698)
Q Consensus 411 ~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p---~~~~~K~iIk~i 487 (698)
+.+|+..+++.++++++.|+..+|+.++ ++.++.++.+.. .++++++.|.+.+ .+...+...+.+
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~-----------~~v~LvIvG~g~~~~~~~~e~~~~~~~L 629 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR-----------ELANLVVVGGDRRKESKDNEEKAEMKKM 629 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH-----------HHCEEEEECCCTTSCCCCHHHHHHHHHH
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHH-HHHHHHHHHhhC-----------CCeEEEEEeCCCcccccchhhHHHHHHH
Confidence 4456655788999999999999999999 999888875431 1478999999873 344444455556
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcC---C--CHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchh
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPD---Y--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVE 562 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~n---Y--~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vE 562 (698)
.++++..+ +.+ +|.|+.- + ..++.+.+..++|++++||+ .|++|++-+-||..|++.|+|..|...|
T Consensus 630 ~~li~~lg----L~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~E 701 (816)
T 3s28_A 630 YDLIEEYK----LNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAE 701 (816)
T ss_dssp HHHHHHTT----CBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHH
T ss_pred HHHHHHcC----CCC--cEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHH
Confidence 66665432 345 7888752 1 25677777779999999999 9999999999999999999998876555
Q ss_pred hhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCCh
Q 005402 563 IRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDF 642 (698)
Q Consensus 563 i~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df 642 (698)
+++.. +||++ +.+.|.+++.++|.
T Consensus 702 iV~dg--~~Gll-------------------------------------v~p~D~e~LA~aI~----------------- 725 (816)
T 3s28_A 702 IIVHG--KSGFH-------------------------------------IDPYHGDQAADTLA----------------- 725 (816)
T ss_dssp HCCBT--TTBEE-------------------------------------ECTTSHHHHHHHHH-----------------
T ss_pred HHccC--CcEEE-------------------------------------eCCCCHHHHHHHHH-----------------
Confidence 54221 22222 34446677777775
Q ss_pred hHHHHHHHHHH-HHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHH
Q 005402 643 PSYLECQEKVD-EAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARD 688 (698)
Q Consensus 643 ~sy~~aq~~a~-~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~ 688 (698)
++. .++.|++.|.++..++.... ..|||++++++|.+.
T Consensus 726 --------~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~l 765 (816)
T 3s28_A 726 --------DFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTL 765 (816)
T ss_dssp --------HHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHH
T ss_pred --------HHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 553 46789999999999998765 699999999999873
No 11
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.11 E-value=1.1e-09 Score=116.72 Aligned_cols=191 Identities=14% Similarity=0.071 Sum_probs=134.6
Q ss_pred HHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHH
Q 005402 407 SFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKF 486 (698)
Q Consensus 407 ~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~ 486 (698)
+.+++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+- ..++++++.|.+...+...+..++.
T Consensus 219 ~~~r~~~~~--~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~-----------~~~~~l~i~G~g~~~~~~~~~~l~~ 284 (416)
T 2x6q_A 219 LRILERFDV--DPEKPIITQVSRFDPWKGIFD-VIEIYRKVKEK-----------IPGVQLLLVGVMAHDDPEGWIYFEK 284 (416)
T ss_dssp HHHHHHTTC--CTTSCEEEEECCCCTTSCHHH-HHHHHHHHHHH-----------CTTCEEEEEECCCTTCHHHHHHHHH
T ss_pred HHHHHHhCC--CCCCcEEEEEeccccccCHHH-HHHHHHHHHHh-----------CCCeEEEEEecCcccchhHHHHHHH
Confidence 346677775 467789999999999999999 99988877542 1258999999987544333332222
Q ss_pred HHHHhhhhcCCCCCCCcceEEEEc---CCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhh
Q 005402 487 ITDVGATVNHDPEIGDLLKVIFVP---DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 563 (698)
Q Consensus 487 i~~~a~~in~dp~~~~~lkvvf~~---nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi 563 (698)
+++..+ ..+ +|.|+. +++-+-...++++||+++.||+ .|+.|++-+-||..|.+.|+|..|...|+
T Consensus 285 ---~~~~~~----~~~--~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~ 353 (416)
T 2x6q_A 285 ---TLRKIG----EDY--DVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQ 353 (416)
T ss_dssp ---HHHHHT----TCT--TEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHH
T ss_pred ---HHHHhC----CCC--cEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhh
Confidence 222221 234 677754 5556667788999999999999 89999999999999999999988766666
Q ss_pred hhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChh
Q 005402 564 RQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFP 643 (698)
Q Consensus 564 ~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~ 643 (698)
++.. ++||++. |.++|.++|.
T Consensus 354 i~~~--~~g~l~~---------------------------------------d~~~la~~i~------------------ 374 (416)
T 2x6q_A 354 IVDG--ETGFLVR---------------------------------------DANEAVEVVL------------------ 374 (416)
T ss_dssp CCBT--TTEEEES---------------------------------------SHHHHHHHHH------------------
T ss_pred eecC--CCeEEEC---------------------------------------CHHHHHHHHH------------------
Confidence 5432 3455543 2233333332
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhc
Q 005402 644 SYLECQEKVDEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 644 sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~iw~ 691 (698)
.+..|++.+.++..++.... ..|||++++++|.+.+=.
T Consensus 375 ----------~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 375 ----------YLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp ----------HHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred ----------HHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 23457888888877775543 479999999999876543
No 12
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.03 E-value=1.9e-09 Score=114.61 Aligned_cols=209 Identities=13% Similarity=0.083 Sum_probs=137.4
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHH--HHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQA--KRIVK 485 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~--K~iIk 485 (698)
..++++|++-+.+.+.++++.|+..+|+.++ ++..+.++.+- ..++++++.|.+.+..... +.+-+
T Consensus 171 ~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~-li~a~~~l~~~-----------~~~~~l~ivG~g~~~~~~~l~~~~~~ 238 (413)
T 3oy2_A 171 DARKLVGLSEYNDDVLFLNMNRNTARKRLDI-YVLAAARFISK-----------YPDAKVRFLCNSHHESKFDLHSIALR 238 (413)
T ss_dssp THHHHTTCGGGTTSEEEECCSCSSGGGTHHH-HHHHHHHHHHH-----------CTTCCEEEEEECCTTCSCCHHHHHHH
T ss_pred HHHHhcCCCcccCceEEEEcCCCchhcCcHH-HHHHHHHHHHh-----------CCCcEEEEEeCCcccchhhHHHHHHH
Confidence 3556677654347899999999999999999 99998887542 1257899999887653211 23333
Q ss_pred HHHHHhhhhcCCCCCCCcc----eEEEEcCC-CHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccc
Q 005402 486 FITDVGATVNHDPEIGDLL----KVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGAN 560 (698)
Q Consensus 486 ~i~~~a~~in~dp~~~~~l----kvvf~~nY-~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~ 560 (698)
++.++. +.+++ +|+++.+| +-+-...++++||++++||+ .|+.|++-+-||..|++.|+|..|..
T Consensus 239 ~~~~~~--------l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~ 308 (413)
T 3oy2_A 239 ELVASG--------VDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGA 308 (413)
T ss_dssp HHHHHT--------CSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHH
T ss_pred HHHHcC--------cccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCCh
Confidence 333322 33310 25666675 44555668899999999999 99999999999999999999998877
Q ss_pred hhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC---CCCCCHHHHHHhhccCCCCCCCcccc
Q 005402 561 VEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV---FGSYNYDELMGSLEGNEGFGQADYFL 637 (698)
Q Consensus 561 vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~---F~~~~~~~l~~~l~~~~~~~~~D~y~ 637 (698)
.|+++.. .| |.+....... . ...+|+ +.+.|.++|.+
T Consensus 309 ~e~v~~~--~~-~~i~~~~~~~--~--------------------~~~~G~~gl~~~~d~~~la~--------------- 348 (413)
T 3oy2_A 309 DDYFSGD--CV-YKIKPSAWIS--V--------------------DDRDGIGGIEGIIDVDDLVE--------------- 348 (413)
T ss_dssp HHHSCTT--TS-EEECCCEEEE--C--------------------TTTCSSCCEEEECCHHHHHH---------------
T ss_pred HHHHccC--cc-cccccccccc--c--------------------ccccCcceeeCCCCHHHHHH---------------
Confidence 7766432 11 1111000000 0 001121 22234444443
Q ss_pred ccCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhcc
Q 005402 638 VGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 638 v~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~iw~~ 692 (698)
.+ .++.|++.+.++..++.... ..|||++++++|.+.+=.+
T Consensus 349 -------------~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 349 -------------AF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp -------------HH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred -------------HH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 33 45678888888888887653 6899999999998866443
No 13
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.00 E-value=2e-08 Score=112.19 Aligned_cols=130 Identities=5% Similarity=-0.069 Sum_probs=89.9
Q ss_pred HHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccC-HHHHHHH
Q 005402 406 VSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIV 484 (698)
Q Consensus 406 ~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~-~~~K~iI 484 (698)
.+.+++++| +.+++.++.|+...|+.+. ++..+.++.+- .|..+ .++++|+.|.+...+ ....++-
T Consensus 245 ~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~-ll~A~~~ll~~---~p~~~----~~v~Lv~vG~p~~~~~~~~~~l~ 311 (482)
T 1uqt_A 245 LAQLKAELK-----NVQNIFSVERLDYSKGLPE-RFLAYEALLEK---YPQHH----GKIRYTQIAPTSRGDVQAYQDIR 311 (482)
T ss_dssp HHHHHHHTT-----TCEEEEEECCBCGGGCHHH-HHHHHHHHHHH---CGGGT----TTEEEEEECCBCSTTSHHHHHHH
T ss_pred HHHHHHHhC-----CCEEEEEEeCCcccCCHHH-HHHHHHHHHHh---Ccccc----CcEEEEEEECCCccchHHHHHHH
Confidence 456777776 4578999999999999999 99999988653 33322 257888888644322 2233455
Q ss_pred HHHHHHhhhhcCCCCCCCcceEEEEcC-CCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCc
Q 005402 485 KFITDVGATVNHDPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGC 550 (698)
Q Consensus 485 k~i~~~a~~in~dp~~~~~lkvvf~~n-Y~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~ 550 (698)
+.+.+++..+|..-...+.-.|.|+.+ .+-+--..++++||+++.||+ .|.-|+.-+-||.-|.
T Consensus 312 ~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~ 376 (482)
T 1uqt_A 312 HQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQD 376 (482)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSC
T ss_pred HHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCC
Confidence 566666665542100111114777654 345555578999999999999 9999999999999885
No 14
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.99 E-value=4e-09 Score=110.31 Aligned_cols=187 Identities=14% Similarity=0.094 Sum_probs=135.9
Q ss_pred HHHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHH
Q 005402 406 VSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVK 485 (698)
Q Consensus 406 ~~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk 485 (698)
...+++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+- ..+++++|.|.+. +...
T Consensus 185 ~~~~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~~-----------~~~~~l~i~G~g~--~~~~----- 243 (394)
T 3okp_A 185 KSATRKKLGF--TDTTPVIACNSRLVPRKGQDS-LIKAMPQVIAA-----------RPDAQLLIVGSGR--YEST----- 243 (394)
T ss_dssp HHHHHHHTTC--CTTCCEEEEESCSCGGGCHHH-HHHHHHHHHHH-----------STTCEEEEECCCT--THHH-----
T ss_pred hHHHHHhcCC--CcCceEEEEEeccccccCHHH-HHHHHHHHHhh-----------CCCeEEEEEcCch--HHHH-----
Confidence 3457778876 466789999999999999999 99988877542 1258999999863 2222
Q ss_pred HHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcc-------cCCCchhhHHHhcCceeeeeccc
Q 005402 486 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGM-------EASGTSNMKFAMNGCILIGTLDG 558 (698)
Q Consensus 486 ~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~-------EasGts~Mka~~NG~l~ist~DG 558 (698)
+.+++.. +.+ +|.|+...+-+-...+++.||+++.||+ . |+.|++-+-||..|.+.|+|..|
T Consensus 244 -l~~~~~~------~~~--~v~~~g~~~~~~~~~~~~~ad~~v~ps~--~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~ 312 (394)
T 3okp_A 244 -LRRLATD------VSQ--NVKFLGRLEYQDMINTLAAADIFAMPAR--TRGGGLDVEGLGIVYLEAQACGVPVIAGTSG 312 (394)
T ss_dssp -HHHHTGG------GGG--GEEEEESCCHHHHHHHHHHCSEEEECCC--CBGGGTBCCSSCHHHHHHHHTTCCEEECSST
T ss_pred -HHHHHhc------ccC--eEEEcCCCCHHHHHHHHHhCCEEEecCc--cccccccccccCcHHHHHHHcCCCEEEeCCC
Confidence 3333322 223 7888887776677778899999999999 6 99999999999999999998877
Q ss_pred cchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccc
Q 005402 559 ANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLV 638 (698)
Q Consensus 559 w~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v 638 (698)
...|+++.. +|+++ .+.|.++|.++|.
T Consensus 313 ~~~e~i~~~---~g~~~-------------------------------------~~~d~~~l~~~i~------------- 339 (394)
T 3okp_A 313 GAPETVTPA---TGLVV-------------------------------------EGSDVDKLSELLI------------- 339 (394)
T ss_dssp TGGGGCCTT---TEEEC-------------------------------------CTTCHHHHHHHHH-------------
T ss_pred ChHHHHhcC---CceEe-------------------------------------CCCCHHHHHHHHH-------------
Confidence 666554221 33333 2335555555553
Q ss_pred cCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhcc
Q 005402 639 GKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 639 ~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~iw~~ 692 (698)
.+..|++.+.++..++.+.. ..|||++.+++|.+.+=.+
T Consensus 340 ---------------~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 340 ---------------ELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSE 379 (394)
T ss_dssp ---------------HHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSC
T ss_pred ---------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 34468888888888876643 3699999999998876544
No 15
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.97 E-value=5.4e-09 Score=111.79 Aligned_cols=193 Identities=14% Similarity=0.075 Sum_probs=131.3
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
.+++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+. .|. .+++++|.|...+.-...+. +
T Consensus 232 ~~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~~---~p~------~~~~l~i~G~~~~~g~~~~~----l 295 (438)
T 3c48_A 232 RSRRELGI--PLHTKVVAFVGRLQPFKGPQV-LIKAVAALFDR---DPD------RNLRVIICGGPSGPNATPDT----Y 295 (438)
T ss_dssp HHHHHTTC--CSSSEEEEEESCBSGGGCHHH-HHHHHHHHHHH---CTT------CSEEEEEECCBC------CH----H
T ss_pred hhHHhcCC--CCCCcEEEEEeeecccCCHHH-HHHHHHHHHhh---CCC------cceEEEEEeCCCCCCcHHHH----H
Confidence 35677775 466789999999999999999 99988887542 110 15899999983321111222 3
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhc
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 567 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~ 567 (698)
.++++..+ +.+ +|.|+...+-+-...+++.||+++.||+ .|+.|++-+-||..|.+.|+|..|...|+++..
T Consensus 296 ~~~~~~~~----l~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~ 367 (438)
T 3c48_A 296 RHMAEELG----VEK--RIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEG 367 (438)
T ss_dssp HHHHHHTT----CTT--TEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBT
T ss_pred HHHHHHcC----CCC--cEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCC
Confidence 33333211 334 6888877665666788899999999999 899999999999999999988777655554321
Q ss_pred cCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHH
Q 005402 568 GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLE 647 (698)
Q Consensus 568 G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~ 647 (698)
++++++ .+.|.++|.++|.
T Consensus 368 --~~g~~~-------------------------------------~~~d~~~la~~i~---------------------- 386 (438)
T 3c48_A 368 --ETGLLV-------------------------------------DGHSPHAWADALA---------------------- 386 (438)
T ss_dssp --TTEEEE-------------------------------------SSCCHHHHHHHHH----------------------
T ss_pred --CcEEEC-------------------------------------CCCCHHHHHHHHH----------------------
Confidence 233332 2334555555553
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhc
Q 005402 648 CQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 648 aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~ 691 (698)
+ +..|++.+.++..++......|||++++++|.+.+-.
T Consensus 387 ---~---l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 424 (438)
T 3c48_A 387 ---T---LLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYND 424 (438)
T ss_dssp ---H---HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---H---HHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3 3357888888877776544349999999999876543
No 16
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.89 E-value=1.3e-08 Score=97.42 Aligned_cols=127 Identities=16% Similarity=0.075 Sum_probs=97.8
Q ss_pred HHHHHHHhCCCCCCCCceeeeccccc-hhhhhhhhhhHHHHHHH--HHHhcChhhhhcccCCeEEEEEecCCccCHHHHH
Q 005402 406 VSFIKEKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYK--KMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKR 482 (698)
Q Consensus 406 ~~~l~~~~g~~~~~~~~~~~~v~R~~-~yKR~~Lnil~~~~~l~--~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~ 482 (698)
...+++++|++ +.++++++.|+. .+|+.++ ++..+.++. +- ..++++++.|.+.|.+...
T Consensus 24 ~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~-li~a~~~l~~~~~-----------~~~~~l~i~G~~~~~~~~~-- 86 (200)
T 2bfw_A 24 KKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDV-LLKAIEILSSKKE-----------FQEMRFIIIGKGDPELEGW-- 86 (200)
T ss_dssp HHHHHHHTTCC---SCEEEEEESCBCSSSSCHHH-HHHHHHHHTTSGG-----------GGGEEEEEECCBCHHHHHH--
T ss_pred HHHHHHHcCCC---CCCEEEEeeccccccCCHHH-HHHHHHHHHhhcc-----------CCCeEEEEECCCChHHHHH--
Confidence 45678888874 345888999999 9999999 988887763 21 1268999999987644333
Q ss_pred HHHHHHHHhhhhcCCCCCCCcceEEE-EcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccch
Q 005402 483 IVKFITDVGATVNHDPEIGDLLKVIF-VPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV 561 (698)
Q Consensus 483 iIk~i~~~a~~in~dp~~~~~lkvvf-~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~v 561 (698)
+.++.+. . + +|.| +...+-+-...+++.||+++.||+ .|++|++-+-||..|++.|+|..|...
T Consensus 87 ----l~~~~~~---~----~--~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~ 151 (200)
T 2bfw_A 87 ----ARSLEEK---H----G--NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLR 151 (200)
T ss_dssp ----HHHHHHH---C----T--TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCHHHH
T ss_pred ----HHHHHHh---c----C--CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEEEeCCCChH
Confidence 5555542 1 1 5888 666665666788999999999999 799999999999999999999887666
Q ss_pred hhh
Q 005402 562 EIR 564 (698)
Q Consensus 562 Ei~ 564 (698)
|++
T Consensus 152 e~~ 154 (200)
T 2bfw_A 152 DII 154 (200)
T ss_dssp HHC
T ss_pred HHc
Confidence 655
No 17
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.88 E-value=8.2e-09 Score=109.19 Aligned_cols=184 Identities=18% Similarity=0.198 Sum_probs=125.6
Q ss_pred HHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHH
Q 005402 408 FIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFI 487 (698)
Q Consensus 408 ~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i 487 (698)
.+++++|++ ++.+.++++.|+..+|+.++ ++..+.++.+- .++++++.|.+.. . .. +
T Consensus 200 ~~~~~~~~~--~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~~------------~~~~l~i~G~g~~--~--~~----l 256 (394)
T 2jjm_A 200 QLKKEYGIS--ESEKILIHISNFRKVKRVQD-VVQAFAKIVTE------------VDAKLLLVGDGPE--F--CT----I 256 (394)
T ss_dssp HHHHHTTCC-----CEEEEECCCCGGGTHHH-HHHHHHHHHHS------------SCCEEEEECCCTT--H--HH----H
T ss_pred HHHHHcCCC--CCCeEEEEeeccccccCHHH-HHHHHHHHHhh------------CCCEEEEECCchH--H--HH----H
Confidence 345566653 56788999999999999999 98888776431 2679999997652 2 12 3
Q ss_pred HHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhc
Q 005402 488 TDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 567 (698)
Q Consensus 488 ~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~ 567 (698)
.++++..+ +.+ +|.|+. +..++ ..+++.||++++||+ .|+.|++-+-||..|.+.|+|..|...|+++..
T Consensus 257 ~~~~~~~~----l~~--~v~~~g-~~~~~-~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~ 326 (394)
T 2jjm_A 257 LQLVKNLH----IED--RVLFLG-KQDNV-AELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHG 326 (394)
T ss_dssp HHHHHTTT----CGG--GBCCCB-SCSCT-HHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBT
T ss_pred HHHHHHcC----CCC--eEEEeC-chhhH-HHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcC
Confidence 33333211 233 566655 44444 467789999999999 899999999999999999999887666655332
Q ss_pred cCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHH
Q 005402 568 GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLE 647 (698)
Q Consensus 568 G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~ 647 (698)
++||++ .+.|.++|.++|.
T Consensus 327 --~~g~~~-------------------------------------~~~d~~~la~~i~---------------------- 345 (394)
T 2jjm_A 327 --DTGYLC-------------------------------------EVGDTTGVADQAI---------------------- 345 (394)
T ss_dssp --TTEEEE-------------------------------------CTTCHHHHHHHHH----------------------
T ss_pred --CceEEe-------------------------------------CCCCHHHHHHHHH----------------------
Confidence 234433 2234555555443
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhccC-CCCChHHHHHHHHHHHhc
Q 005402 648 CQEKVDEAYCDQKRWTRMSIMNTAGS-SKFSSDRTIQEYARDIWN 691 (698)
Q Consensus 648 aq~~a~~~Y~d~~~W~~~~~~~ma~~-~~FS~drsi~eY~~~iw~ 691 (698)
+ +..|++.+.++..++-... ..|||++++++|.+.+=.
T Consensus 346 ---~---l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 346 ---Q---LLKDEELHRNMGERARESVYEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp ---H---HHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred ---H---HHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 2 3357888888877776554 689999999999876543
No 18
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.88 E-value=1.1e-08 Score=112.21 Aligned_cols=199 Identities=14% Similarity=0.109 Sum_probs=132.5
Q ss_pred HHHHHHhC---CCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCC-c--cC---
Q 005402 407 SFIKEKTG---YSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAF-A--TY--- 477 (698)
Q Consensus 407 ~~l~~~~g---~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~-p--~~--- 477 (698)
..+++++| ..++++.++++++.|+..+|+.++ ++..+.++.+.. + . ...++++|... | .|
T Consensus 245 ~~~r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~~---~--~-----~~~l~i~G~~~~~~~~y~~l 313 (499)
T 2r60_A 245 AKITKYLERDLGSERMELPAIIASSRLDQKKNHYG-LVEAYVQNKELQ---D--K-----ANLVLTLRGIENPFEDYSRA 313 (499)
T ss_dssp HHHHHHHHHHSCGGGTTSCEEEECSCCCGGGCHHH-HHHHHHTCHHHH---H--H-----CEEEEEESSCSBTTTBCTTS
T ss_pred HHHHHHhcccccccCCCCcEEEEeecCccccCHHH-HHHHHHHHHHhC---C--C-----ceEEEEECCCCCcccccccc
Confidence 44566666 112356789999999999999999 998887765321 1 1 46788888732 2 11
Q ss_pred -HHHHHHHHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhcccc----ccccccCCCcccCCCchhhHHHhcCcee
Q 005402 478 -VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCIL 552 (698)
Q Consensus 478 -~~~K~iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~----Dv~l~~s~~~~EasGts~Mka~~NG~l~ 552 (698)
...+...+.+.++++..+ +.+ +|.|+...+-+-...++++| |+++.||+ .|..|++-+-||..|.+.
T Consensus 314 ~~~~~~y~~~l~~~~~~~~----l~~--~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~Pv 385 (499)
T 2r60_A 314 GQEEKEILGKIIELIDNND----CRG--KVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPA 385 (499)
T ss_dssp CHHHHHHHHHHHHHHHHTT----CBT--TEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCE
T ss_pred cccchHHHHHHHHHHHhcC----CCc--eEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCE
Confidence 111111222444444221 345 68888776656667788999 99999999 899999999999999999
Q ss_pred eeeccccchhhhhhccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCC
Q 005402 553 IGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQ 632 (698)
Q Consensus 553 ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~ 632 (698)
|+|..|...|+++.. +||++ +.+.|.++|.++|.
T Consensus 386 I~s~~~g~~e~v~~~--~~g~l-------------------------------------~~~~d~~~la~~i~------- 419 (499)
T 2r60_A 386 VVTRNGGPAEILDGG--KYGVL-------------------------------------VDPEDPEDIARGLL------- 419 (499)
T ss_dssp EEESSBHHHHHTGGG--TSSEE-------------------------------------ECTTCHHHHHHHHH-------
T ss_pred EEecCCCHHHHhcCC--ceEEE-------------------------------------eCCCCHHHHHHHHH-------
Confidence 999877555554332 22332 33345555555553
Q ss_pred CccccccCChhHHHHHHHHHHHHhcCHHHHHHHHHHHhccCC-CCChHHHHHHHHHHHhc
Q 005402 633 ADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSS-KFSSDRTIQEYARDIWN 691 (698)
Q Consensus 633 ~D~y~v~~Df~sy~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~-~FS~drsi~eY~~~iw~ 691 (698)
.+..|++.+.++..++-.... .|||++++++|.+.+-.
T Consensus 420 ---------------------~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 458 (499)
T 2r60_A 420 ---------------------KAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQE 458 (499)
T ss_dssp ---------------------HHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHH
T ss_pred ---------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 234588888888777755433 59999999999876543
No 19
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.85 E-value=1.5e-08 Score=105.42 Aligned_cols=185 Identities=12% Similarity=0.067 Sum_probs=124.8
Q ss_pred HHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHH
Q 005402 407 SFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKF 486 (698)
Q Consensus 407 ~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~ 486 (698)
+.+++++|++ ++.+.++++.|+..+|+.++ ++..+.++.+.. . .++++++.|.+.+ +.+.++
T Consensus 184 ~~~~~~~~~~--~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~-----~-----~~~~l~i~G~g~~-----~~~~~~ 245 (374)
T 2iw1_A 184 EIYRQKNGIK--EQQNLLLQVGSDFGRKGVDR-SIEALASLPESL-----R-----HNTLLFVVGQDKP-----RKFEAL 245 (374)
T ss_dssp HHHHHHTTCC--TTCEEEEEECSCTTTTTHHH-HHHHHHTSCHHH-----H-----HTEEEEEESSSCC-----HHHHHH
T ss_pred HHHHHHhCCC--CCCeEEEEeccchhhcCHHH-HHHHHHHhHhcc-----C-----CceEEEEEcCCCH-----HHHHHH
Confidence 4566777754 56789999999999999999 888776653310 0 1689999999753 233333
Q ss_pred HHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhh
Q 005402 487 ITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 566 (698)
Q Consensus 487 i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~ 566 (698)
+.++. +.+ +|.|+. +..+ ...+++.||+++.||+ .|+.|++-+-||..|.+.|+|..|...|+++.
T Consensus 246 ~~~~~--------~~~--~v~~~g-~~~~-~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~ 311 (374)
T 2iw1_A 246 AEKLG--------VRS--NVHFFS-GRND-VSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIAD 311 (374)
T ss_dssp HHHHT--------CGG--GEEEES-CCSC-HHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHH
T ss_pred HHHcC--------CCC--cEEECC-Cccc-HHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchhhhcc
Confidence 33332 223 677775 4433 4567899999999999 89999999999999999998877755555433
Q ss_pred ccCcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHH
Q 005402 567 VGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYL 646 (698)
Q Consensus 567 ~G~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~ 646 (698)
. .+|+++. .+.|.+++.++|.
T Consensus 312 ~--~~g~~~~------------------------------------~~~~~~~l~~~i~--------------------- 332 (374)
T 2iw1_A 312 A--NCGTVIA------------------------------------EPFSQEQLNEVLR--------------------- 332 (374)
T ss_dssp H--TCEEEEC------------------------------------SSCCHHHHHHHHH---------------------
T ss_pred C--CceEEeC------------------------------------CCCCHHHHHHHHH---------------------
Confidence 2 2333332 0234555555554
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 647 ECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 647 ~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
++ ..|++.+.++..++......|||+..++.+.+.+
T Consensus 333 ----~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 368 (374)
T 2iw1_A 333 ----KA---LTQSPLRMAWAENARHYADTQDLYSLPEKAADII 368 (374)
T ss_dssp ----HH---HHCHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred ----HH---HcChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33 3477777777777665544667777777766654
No 20
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.84 E-value=9.1e-09 Score=95.79 Aligned_cols=163 Identities=16% Similarity=0.129 Sum_probs=104.0
Q ss_pred CceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 421 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 421 ~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
.+.++++.|+..+|+.++ ++..+.++ ++ ..++++++.|.+.. . +. +.++++..+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~-li~a~~~l---~~---------~~~~~l~i~G~g~~--~--~~----~~~~~~~~~----- 55 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSV-LIKAVALS---KY---------KQDIVLLLKGKGPD--E--KK----IKLLAQKLG----- 55 (166)
T ss_dssp CEEEEEESCCSTTTTHHH-HHHHHHTC---TT---------GGGEEEEEECCSTT--H--HH----HHHHHHHHT-----
T ss_pred ceEEEEEeccchhcCHHH-HHHHHHHh---cc---------CCCeEEEEEeCCcc--H--HH----HHHHHHHcC-----
Confidence 367899999999999999 88887764 21 12689999998643 2 22 333333211
Q ss_pred CCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCc-eeeeecc-ccchhhhhhccCcceeecccc
Q 005402 501 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGC-ILIGTLD-GANVEIRQEVGEENFFLFGAR 578 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~-l~ist~D-Gw~vEi~~~~G~~N~~~fG~~ 578 (698)
. +|.| .-.+-+-...+++.||++++||+ .|+.|++-+-||..|. +.|+|.+ |...|+++..+
T Consensus 56 -~--~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~---------- 119 (166)
T 3qhp_A 56 -V--KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFALDER---------- 119 (166)
T ss_dssp -C--EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGG----------
T ss_pred -C--eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCc----------
Confidence 1 4555 33345566778899999999999 9999999999999997 7777443 33333221110
Q ss_pred hhhhhhhhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhcC
Q 005402 579 AHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCD 658 (698)
Q Consensus 579 ~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~d 658 (698)
. .|.+.|.+++.+.|. + +..|
T Consensus 120 ------------------------------~-~~~~~~~~~l~~~i~-------------------------~---l~~~ 140 (166)
T 3qhp_A 120 ------------------------------S-LFEPNNAKDLSAKID-------------------------W---WLEN 140 (166)
T ss_dssp ------------------------------G-EECTTCHHHHHHHHH-------------------------H---HHHC
T ss_pred ------------------------------e-EEcCCCHHHHHHHHH-------------------------H---HHhC
Confidence 0 133445666665554 3 3458
Q ss_pred HHHHHHHHHHHhccCCCCChHHHHHH
Q 005402 659 QKRWTRMSIMNTAGSSKFSSDRTIQE 684 (698)
Q Consensus 659 ~~~W~~~~~~~ma~~~~FS~drsi~e 684 (698)
++.+.++..++......|||++++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 141 KLERERMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHHCChhhhhcC
Confidence 88888888877665568999988763
No 21
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.73 E-value=6.3e-08 Score=101.82 Aligned_cols=175 Identities=9% Similarity=0.062 Sum_probs=124.0
Q ss_pred CCceeeecccc-chhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 420 DAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 420 ~~~~~~~v~R~-~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
+.+.++++.|+ ..+|+.++ ++..+.++.+. ..++++++.|.+.. . . +.++++..
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~-li~a~~~l~~~-----------~~~~~l~i~G~~~~--~---~----l~~~~~~~---- 261 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAV-LLAALPKLVAR-----------FPDVEILIVGRGDE--D---E----LREQAGDL---- 261 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHH-HHHHHHHHHTT-----------STTCEEEEESCSCH--H---H----HHHHTGGG----
T ss_pred CCeEEEEEeeeCccccCHHH-HHHHHHHHHHH-----------CCCeEEEEEcCCcH--H---H----HHHHHHhc----
Confidence 56799999999 99999999 98887776431 12689999999764 2 2 33333321
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccc
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGAR 578 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~ 578 (698)
.+ +|.|+...+-.-...+++.||++++||. ..|.+|++-+-||..|.+.|+|..|...|+++..
T Consensus 262 --~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~----------- 325 (406)
T 2gek_A 262 --AG--HLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADG----------- 325 (406)
T ss_dssp --GG--GEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTT-----------
T ss_pred --cC--cEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCC-----------
Confidence 13 6888776666656788899999999983 2899999999999999999988776555444321
Q ss_pred hhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhc
Q 005402 579 AHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 657 (698)
Q Consensus 579 ~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~ 657 (698)
.+|+ +.+.|.+++.++|. + +..
T Consensus 326 -----------------------------~~g~~~~~~d~~~l~~~i~-------------------------~---l~~ 348 (406)
T 2gek_A 326 -----------------------------DAGRLVPVDDADGMAAALI-------------------------G---ILE 348 (406)
T ss_dssp -----------------------------TSSEECCTTCHHHHHHHHH-------------------------H---HHH
T ss_pred -----------------------------CceEEeCCCCHHHHHHHHH-------------------------H---HHc
Confidence 2233 33335555555553 3 345
Q ss_pred CHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcc
Q 005402 658 DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 692 (698)
Q Consensus 658 d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~ 692 (698)
|++.+.++..++-.....|||++.+++|.+.+-.+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 383 (406)
T 2gek_A 349 DDQLRAGYVARASERVHRYDWSVVSAQIMRVYETV 383 (406)
T ss_dssp CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 88888888777765545899999999998766543
No 22
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.58 E-value=1.9e-07 Score=88.88 Aligned_cols=129 Identities=15% Similarity=0.071 Sum_probs=99.8
Q ss_pred CCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhh
Q 005402 415 YSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATV 494 (698)
Q Consensus 415 ~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~i 494 (698)
..++++.++++++.|+..+|+.++ ++..+.++ . ++++++.|.+.... .+.+++.++...
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l---~------------~~~l~i~G~~~~~~----~l~~~~~~~~~~- 75 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIEL-QLEVFKKL---Q------------DEKLYIVGWFSKGD----HAERYARKIMKI- 75 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHH-HHHHHHHC---T------------TSCEEEEBCCCTTS----THHHHHHHHHHH-
T ss_pred cccCCCCCEEEEEeccccccCHHH-HHHHHHhC---C------------CcEEEEEecCccHH----HHHHHHHhhhcc-
Confidence 456778899999999999999999 87766553 1 56899999876542 233333322211
Q ss_pred cCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceee
Q 005402 495 NHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFL 574 (698)
Q Consensus 495 n~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~ 574 (698)
+++ +|.|+...+-+-...+++.||+++.||+ .|..|++-+-||..|++.|+|..|...|+++.. .++++
T Consensus 76 -----l~~--~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~~ 144 (177)
T 2f9f_A 76 -----APD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINE--KTGYL 144 (177)
T ss_dssp -----SCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBT--TTEEE
T ss_pred -----cCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCC--CccEE
Confidence 334 7888888887778889999999999999 999999999999999999999999888776542 56777
Q ss_pred c
Q 005402 575 F 575 (698)
Q Consensus 575 f 575 (698)
+
T Consensus 145 ~ 145 (177)
T 2f9f_A 145 V 145 (177)
T ss_dssp E
T ss_pred e
Confidence 6
No 23
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.48 E-value=4e-07 Score=94.35 Aligned_cols=115 Identities=17% Similarity=0.148 Sum_probs=85.2
Q ss_pred CCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 419 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 419 ~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
++.++++++.|+..+|+.++ ++..+.++ ++++++.|.+. +... +.++++..+
T Consensus 160 ~~~~~i~~vG~~~~~Kg~~~-li~a~~~~----------------~~~l~i~G~g~--~~~~------l~~~~~~~~--- 211 (342)
T 2iuy_A 160 AKEDFLLFMGRVSPHKGALE-AAAFAHAC----------------GRRLVLAGPAW--EPEY------FDEITRRYG--- 211 (342)
T ss_dssp CCCSCEEEESCCCGGGTHHH-HHHHHHHH----------------TCCEEEESCCC--CHHH------HHHHHHHHT---
T ss_pred CCCCEEEEEeccccccCHHH-HHHHHHhc----------------CcEEEEEeCcc--cHHH------HHHHHHHhC---
Confidence 34568999999999999999 88876653 35799999884 2222 333333221
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCC--------cccCCCchhhHHHhcCceeeeeccccchhhhhh
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTA--------GMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 566 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~--------~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~ 566 (698)
+ +|.|+..-+-.-...+++.||+++.||+. -.|+.|++-+-||..|.+.|+|..|...|+++.
T Consensus 212 ---~--~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~ 282 (342)
T 2iuy_A 212 ---S--TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPS 282 (342)
T ss_dssp ---T--TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGG
T ss_pred ---C--CEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcc
Confidence 3 68887666665567788999999999982 169999999999999999998877755555443
No 24
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=98.47 E-value=4.1e-06 Score=94.05 Aligned_cols=132 Identities=12% Similarity=0.030 Sum_probs=90.8
Q ss_pred HHHHHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccC-HHHHHHHH
Q 005402 407 SFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIVK 485 (698)
Q Consensus 407 ~~l~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~-~~~K~iIk 485 (698)
+.+++++| +..++..|.|+...|+.+. ++..+ ++++- .|.. . .+++|..|.+..++ ...+++-+
T Consensus 272 ~~lr~~~~-----~~~lIl~VgRLd~~KGi~~-lL~Af-~ll~~---~P~~----~-~v~Lv~Vg~psr~~~~~y~~l~~ 336 (496)
T 3t5t_A 272 EGIEEWAD-----GHRLVVHSGRTDPIKNAER-AVRAF-VLAAR---GGGL----E-KTRMLVRMNPNRLYVPANADYVH 336 (496)
T ss_dssp TTHHHHHT-----TSEEEEEEEESSGGGCHHH-HHHHH-HHHHH---TSSC----T-TEEEEEEEECCCTTSHHHHHHHH
T ss_pred HHHHHHhC-----CceEEEEcccCccccCHHH-HHHHH-HHHHh---Cccc----c-eEEEEEEECCCCCCchHHHHHHH
Confidence 45667776 3678899999999999999 99998 77542 2221 1 46777666544333 33445666
Q ss_pred HHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhc----Cceeeeeccc
Q 005402 486 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMN----GCILIGTLDG 558 (698)
Q Consensus 486 ~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~N----G~l~ist~DG 558 (698)
.+.+++..||.. + +..+|.|+..-+.+---.+|.+||+++.||+ .|.-|+.-+-||.- |.+.+|...|
T Consensus 337 ~l~~lv~~in~~--~-g~~~V~f~g~v~~~el~aly~~ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVlSe~aG 408 (496)
T 3t5t_A 337 RVETAVAEANAE--L-GSDTVRIDNDNDVNHTIACFRRADLLIFNST--VDGQNLSTFEAPLVNERDADVILSETCG 408 (496)
T ss_dssp HHHHHHHHHHHH--H-CTTSEEEEECCCHHHHHHHHHHCSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEEETTBT
T ss_pred HHHHHHHHhccc--c-CCcCEEEeCCCCHHHHHHHHHhccEEEECcc--cccCChhHHHHHHhCCCCCCEEEeCCCC
Confidence 777777776621 1 1115777755455555688999999999999 89999999999886 4555544444
No 25
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.09 E-value=3.5e-05 Score=85.57 Aligned_cols=113 Identities=9% Similarity=0.078 Sum_probs=78.2
Q ss_pred HHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHH
Q 005402 410 KEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD 489 (698)
Q Consensus 410 ~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~ 489 (698)
++++|++ ++. ++.++.|+.. |+.+. ++..+.++.+- ..++++++.|...|. -.. +.+
T Consensus 368 r~~~~~~--~~~-~v~~~g~~~~-K~~~~-li~a~~~l~~~-----------~~~~~l~i~G~~g~~---~~~----l~~ 424 (568)
T 2vsy_A 368 RTQCGLP--EQG-VVLCCFNNSY-KLNPQ-SMARMLAVLRE-----------VPDSVLWLLSGPGEA---DAR----LRA 424 (568)
T ss_dssp TGGGTCC--TTS-CEEEECCCGG-GCCHH-HHHHHHHHHHH-----------CTTCEEEEECCSTTH---HHH----HHH
T ss_pred ccccCCC--CCC-EEEEeCCccc-cCCHH-HHHHHHHHHHh-----------CCCcEEEEecCCHHH---HHH----HHH
Confidence 3456653 333 4458999999 99999 99988887542 125789999952222 122 333
Q ss_pred HhhhhcCCCCCC-CcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeee
Q 005402 490 VGATVNHDPEIG-DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIG 554 (698)
Q Consensus 490 ~a~~in~dp~~~-~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~is 554 (698)
.++... +. + +|.|+..-+-+--..++++||+++.||+ + ..|++-+-||..|++.|+
T Consensus 425 ~~~~~~----l~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~-~~g~~~lEAma~G~Pvv~ 481 (568)
T 2vsy_A 425 FAHAQG----VDAQ--RLVFMPKLPHPQYLARYRHADLFLDTHP--Y-NAHTTASDALWTGCPVLT 481 (568)
T ss_dssp HHHHTT----CCGG--GEEEECCCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHHHHTTCCEEB
T ss_pred HHHHcC----CChh--HEEeeCCCCHHHHHHHHhcCCEEeeCCC--C-CCcHHHHHHHhCCCCEEe
Confidence 333211 23 4 7888876654455678899999999999 7 999999999999998875
No 26
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.03 E-value=1.1e-05 Score=87.95 Aligned_cols=114 Identities=10% Similarity=0.018 Sum_probs=81.1
Q ss_pred CCCceeeecccc-chhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCC
Q 005402 419 PDAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 497 (698)
Q Consensus 419 ~~~~~~~~v~R~-~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~d 497 (698)
++...+.++.|+ .+.|+.++ +++.+.++.+- .|.. .++.+++.|.+....+ ..
T Consensus 239 ~~~~~il~~gr~~~~~Kg~~~-li~A~~~l~~~---~~~~-----~~~~l~ivG~~~~~~~---------------l~-- 292 (413)
T 2x0d_A 239 QKEKIILVYGRPSVKRNAFTL-IVEALKIFVQK---YDRS-----NEWKIISVGEKHKDIA---------------LG-- 292 (413)
T ss_dssp CCCSEEEEEECTTCGGGCHHH-HHHHHHHHHHH---CTTG-----GGCEEEEEESCCCCEE---------------EE--
T ss_pred CCCCEEEEEecCchhccCHHH-HHHHHHHHHHh---CCCC-----CceEEEEEcCCchhhh---------------cC--
Confidence 344567788886 68899999 99988877542 1110 0378999998765411 00
Q ss_pred CCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhh
Q 005402 498 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQ 565 (698)
Q Consensus 498 p~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~ 565 (698)
..+ +|.|+---+-+--..++++||+++.||+ .|..|+.-+-||.-|++.|++..| ..|+++
T Consensus 293 --~~~--~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~~g-~~e~v~ 353 (413)
T 2x0d_A 293 --KGI--HLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNKYE-NKDLSN 353 (413)
T ss_dssp --TTE--EEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEECBT-TBCGGG
T ss_pred --CcC--cEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeCCC-cchhhh
Confidence 123 7888765555556678899999999999 899999999999999999986544 335543
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=97.96 E-value=7.2e-05 Score=78.25 Aligned_cols=119 Identities=13% Similarity=0.020 Sum_probs=75.7
Q ss_pred HHHHHhC-CCCCCCC-ceeeeccccchh-hhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEE-ecCCccCHHHHHH
Q 005402 408 FIKEKTG-YSVSPDA-MFDIQVKRIHEY-KRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFG-GKAFATYVQAKRI 483 (698)
Q Consensus 408 ~l~~~~g-~~~~~~~-~~~~~v~R~~~y-KR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~-Gka~p~~~~~K~i 483 (698)
.+++++| ++ ++. .+.+++.|+..+ |+.+. ++..+.++.+- ..++++++. |. .|.+
T Consensus 193 ~~~~~~~~~~--~~~~~vl~~~gr~~~~~kg~~~-li~a~~~l~~~-----------~~~~~l~i~~g~-~~~~------ 251 (384)
T 1vgv_A 193 ELAANYPFID--PDKKMILVTGHRRESFGRGFEE-ICHALADIATT-----------HQDIQIVYPVHL-NPNV------ 251 (384)
T ss_dssp HHHTTCTTCC--TTSEEEEEECCCBSSCCHHHHH-HHHHHHHHHHH-----------CTTEEEEEECCB-CHHH------
T ss_pred HHHHhccccC--CCCCEEEEEeCCccccchHHHH-HHHHHHHHHhh-----------CCCeEEEEEcCC-CHHH------
Confidence 4555665 42 333 467789999987 99988 88888776432 125788874 43 2311
Q ss_pred HHHHHHHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecc-ccchh
Q 005402 484 VKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVE 562 (698)
Q Consensus 484 Ik~i~~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~D-Gw~vE 562 (698)
.+.+.++.. . .+ +|.|+...+-.-...++++||+++.+| |+..+-||..|.+.|+|.. |...|
T Consensus 252 ~~~l~~~~~---~----~~--~v~~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e 315 (384)
T 1vgv_A 252 REPVNRILG---H----VK--NVILIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPE 315 (384)
T ss_dssp HHHHHHHHT---T----CT--TEEEECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHH
T ss_pred HHHHHHHhh---c----CC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcch
Confidence 122333322 1 13 688864333344567789999999988 4447899999999998865 54444
Q ss_pred h
Q 005402 563 I 563 (698)
Q Consensus 563 i 563 (698)
+
T Consensus 316 ~ 316 (384)
T 1vgv_A 316 A 316 (384)
T ss_dssp H
T ss_pred h
Confidence 4
No 28
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.91 E-value=7.1e-05 Score=77.89 Aligned_cols=110 Identities=10% Similarity=0.029 Sum_probs=72.1
Q ss_pred CCceeeeccccchh-hhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 420 DAMFDIQVKRIHEY-KRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 420 ~~~~~~~v~R~~~y-KR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
+..+.+++.|+.+. |+.+. ++..+.++.+- ..++++|++ .+|. .. +.+.+.++.. .
T Consensus 205 ~~~vl~~~gr~~~~~K~~~~-li~a~~~l~~~-----------~~~~~~i~~--~g~~-~~---~~~~~~~~~~---~-- 261 (375)
T 3beo_A 205 NRLVLMTAHRRENLGEPMRN-MFRAIKRLVDK-----------HEDVQVVYP--VHMN-PV---VRETANDILG---D-- 261 (375)
T ss_dssp SEEEEEECCCGGGTTHHHHH-HHHHHHHHHHH-----------CTTEEEEEE--CCSC-HH---HHHHHHHHHT---T--
T ss_pred CCeEEEEecccccchhHHHH-HHHHHHHHHhh-----------CCCeEEEEe--CCCC-HH---HHHHHHHHhh---c--
Confidence 44567789999886 99999 88888776432 114677764 2342 21 2223333322 1
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecc-ccchhh
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEI 563 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~D-Gw~vEi 563 (698)
.+ +|.|+...+..-...++++||+++.|| |+..+-||..|.+.|+|.+ |...|+
T Consensus 262 --~~--~v~~~g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~ 316 (375)
T 3beo_A 262 --YG--RIHLIEPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEG 316 (375)
T ss_dssp --CT--TEEEECCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHH
T ss_pred --cC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCcee
Confidence 13 688876555555667889999999887 5557889999999998855 544443
No 29
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.59 E-value=0.00018 Score=74.70 Aligned_cols=174 Identities=8% Similarity=-0.027 Sum_probs=106.3
Q ss_pred HHhCCCCCCCCc-eeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeE-EEEEecCCccCHHHHHHHHHHH
Q 005402 411 EKTGYSVSPDAM-FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRV-CIFGGKAFATYVQAKRIVKFIT 488 (698)
Q Consensus 411 ~~~g~~~~~~~~-~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q-~If~Gka~p~~~~~K~iIk~i~ 488 (698)
++++. .++.+ +..+.+|+...|+.++ +++.+.++.+ +.+ ++++|.+.. +++.+++.
T Consensus 175 ~~~~~--~~~~~~il~~~g~~~~~k~~~~-li~a~~~l~~--------------~~~~l~i~G~~~~-----~~l~~~~~ 232 (364)
T 1f0k_A 175 QRLAG--REGPVRVLVVGGSQGARILNQT-MPQVAAKLGD--------------SVTIWHQSGKGSQ-----QSVEQAYA 232 (364)
T ss_dssp HHHTT--CCSSEEEEEECTTTCCHHHHHH-HHHHHHHHGG--------------GEEEEEECCTTCH-----HHHHHHHH
T ss_pred hhccc--CCCCcEEEEEcCchHhHHHHHH-HHHHHHHhcC--------------CcEEEEEcCCchH-----HHHHHHHh
Confidence 45554 34445 5566789999999999 8777766421 356 577898862 22222222
Q ss_pred HHhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhcc
Q 005402 489 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG 568 (698)
Q Consensus 489 ~~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G 568 (698)
++. + + +|.|+. |- +-...+++.||+++.||. |++-+-||..|.+.|+|-.|...
T Consensus 233 ~~~--------~-~--~v~~~g-~~-~~~~~~~~~ad~~v~~sg------~~~~~EAma~G~Pvi~~~~~g~~------- 286 (364)
T 1f0k_A 233 EAG--------Q-P--QHKVTE-FI-DDMAAAYAWADVVVCRSG------ALTVSEIAAAGLPALFVPFQHKD------- 286 (364)
T ss_dssp HTT--------C-T--TSEEES-CC-SCHHHHHHHCSEEEECCC------HHHHHHHHHHTCCEEECCCCCTT-------
T ss_pred hcC--------C-C--ceEEec-ch-hhHHHHHHhCCEEEECCc------hHHHHHHHHhCCCEEEeeCCCCc-------
Confidence 211 1 2 455554 33 234567899999999983 78889999999999987544110
Q ss_pred CcceeecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCC--HHHHHHhhccCCCCCCCccccccCChhHH
Q 005402 569 EENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYN--YDELMGSLEGNEGFGQADYFLVGKDFPSY 645 (698)
Q Consensus 569 ~~N~~~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~--~~~l~~~l~~~~~~~~~D~y~v~~Df~sy 645 (698)
.++.. + .+.+. ..+.|+ +.+.| .++|.++|.
T Consensus 287 ----------~~q~~--~-------------~~~~~-~~g~g~~~~~~d~~~~~la~~i~-------------------- 320 (364)
T 1f0k_A 287 ----------RQQYW--N-------------ALPLE-KAGAAKIIEQPQLSVDAVANTLA-------------------- 320 (364)
T ss_dssp ----------CHHHH--H-------------HHHHH-HTTSEEECCGGGCCHHHHHHHHH--------------------
T ss_pred ----------hhHHH--H-------------HHHHH-hCCcEEEeccccCCHHHHHHHHH--------------------
Confidence 00000 0 00111 112344 43333 666666664
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Q 005402 646 LECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARD 688 (698)
Q Consensus 646 ~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~ 688 (698)
++ |++.+.++..++-.....|||++++++|.+.
T Consensus 321 -----~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (364)
T 1f0k_A 321 -----GW-----SRETLLTMAERARAASIPDATERVANEVSRV 353 (364)
T ss_dssp -----TC-----CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHH
T ss_pred -----hc-----CHHHHHHHHHHHHHhhccCHHHHHHHHHHHH
Confidence 32 7888888888776666799999999998654
No 30
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.56 E-value=0.00045 Score=74.48 Aligned_cols=94 Identities=14% Similarity=0.052 Sum_probs=71.7
Q ss_pred ceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCC
Q 005402 422 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 501 (698)
Q Consensus 422 ~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~ 501 (698)
+.++++.|+.++|+. +..+.+. ..++++++.|.+. ++ ...+.
T Consensus 223 ~~i~~vGrl~~~Kg~-------~~~l~~~-----------~~~~~l~ivG~g~----------------~~----~~~l~ 264 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF-------FVVASKA-----------FPQVTFHVIGSGM----------------GR----HPGYG 264 (406)
T ss_dssp EEEEEECCTTBCHHH-------HHHHHHH-----------CTTEEEEEESCSS----------------CC----CTTCC
T ss_pred cEEEEEeccccccCH-------HHHHHHh-----------CCCeEEEEEeCch----------------HH----hcCCC
Confidence 789999999999998 2233221 1268999999875 11 11244
Q ss_pred CcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHH-------hcCceeeeecc
Q 005402 502 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFA-------MNGCILIGTLD 557 (698)
Q Consensus 502 ~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~-------~NG~l~ist~D 557 (698)
+ +|.|+.--.-+-...++++||+++.||+ .|..|+.-+-|| ..|.+.|+|..
T Consensus 265 ~--~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas~~ 323 (406)
T 2hy7_A 265 D--NVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCPNA 323 (406)
T ss_dssp T--TEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG
T ss_pred C--CEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEehh
Confidence 5 7888866665555678899999999999 899999999999 99999998744
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=96.49 E-value=0.026 Score=58.77 Aligned_cols=102 Identities=12% Similarity=0.060 Sum_probs=65.6
Q ss_pred CCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEE-ecCCccCHHHHHHHHHHHHHhhhhcCCC
Q 005402 420 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFG-GKAFATYVQAKRIVKFITDVGATVNHDP 498 (698)
Q Consensus 420 ~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~-Gka~p~~~~~K~iIk~i~~~a~~in~dp 498 (698)
+..+.+++.|+..+|+.+. ++..+.++.+- ..++++++. |.+ |. -+ +.+.++.. .
T Consensus 198 ~~~vl~~~gr~~~~k~~~~-ll~a~~~l~~~-----------~~~~~lv~~~g~~-~~---~~---~~l~~~~~---~-- 253 (376)
T 1v4v_A 198 GPYVTVTMHRRENWPLLSD-LAQALKRVAEA-----------FPHLTFVYPVHLN-PV---VR---EAVFPVLK---G-- 253 (376)
T ss_dssp SCEEEECCCCGGGGGGHHH-HHHHHHHHHHH-----------CTTSEEEEECCSC-HH---HH---HHHHHHHT---T--
T ss_pred CCEEEEEeCcccchHHHHH-HHHHHHHHHhh-----------CCCeEEEEECCCC-HH---HH---HHHHHHhc---c--
Confidence 4456678999999998777 88777766431 114677775 643 21 11 22333332 1
Q ss_pred CCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeec
Q 005402 499 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTL 556 (698)
Q Consensus 499 ~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~ 556 (698)
.+ +|.|+...+..--..++++||+++.+| .|+ .+-||..|.+.|+|.
T Consensus 254 --~~--~v~~~g~~g~~~~~~~~~~ad~~v~~S------~g~-~lEA~a~G~PvI~~~ 300 (376)
T 1v4v_A 254 --VR--NFVLLDPLEYGSMAALMRASLLLVTDS------GGL-QEEGAALGVPVVVLR 300 (376)
T ss_dssp --CT--TEEEECCCCHHHHHHHHHTEEEEEESC------HHH-HHHHHHTTCCEEECS
T ss_pred --CC--CEEEECCCCHHHHHHHHHhCcEEEECC------cCH-HHHHHHcCCCEEecc
Confidence 13 688886444434456789999999887 245 668999999999763
No 32
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=92.26 E-value=0.36 Score=51.25 Aligned_cols=109 Identities=17% Similarity=0.066 Sum_probs=64.5
Q ss_pred ceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCCC
Q 005402 422 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 501 (698)
Q Consensus 422 ~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~~ 501 (698)
++...+++ ..|+.++ ++..+.++.+- ..+++++++|. +|... .++-+++.++.- .......
T Consensus 197 ~vi~~~~~--~~k~~~~-ll~A~~~l~~~-----------~p~~~lvivG~-g~~~~--~~l~~~~~~~gl--~~~~~~~ 257 (374)
T 2xci_A 197 EFIVAGSI--HTGEVEI-ILKAFKEIKKT-----------YSSLKLILVPR-HIENA--KIFEKKARDFGF--KTSFFEN 257 (374)
T ss_dssp CEEEEEEE--CGGGHHH-HHHHHHHHHTT-----------CTTCEEEEEES-SGGGH--HHHHHHHHHTTC--CEEETTC
T ss_pred CEEEEEeC--CCchHHH-HHHHHHHHHhh-----------CCCcEEEEECC-CHHHH--HHHHHHHHHCCC--ceEEecC
Confidence 34445554 3588888 88887765321 12579999995 45432 223333333220 0000000
Q ss_pred --CcceEEEEcCCCHHHHHhhccccccccccCCCcc-cCCCchhhHHHhcCceeeee
Q 005402 502 --DLLKVIFVPDYNVSVAELLIPASELSQHISTAGM-EASGTSNMKFAMNGCILIGT 555 (698)
Q Consensus 502 --~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~-EasGts~Mka~~NG~l~ist 555 (698)
+ +| ++.++-.++ ..+++.||++..+|. + |.-|.+-+-||..|.+.|++
T Consensus 258 ~~~--~v-~~~~~~~dl-~~~y~~aDv~vl~ss--~~e~gg~~~lEAmA~G~PVI~~ 308 (374)
T 2xci_A 258 LEG--DV-ILVDRFGIL-KELYPVGKIAIVGGT--FVNIGGHNLLEPTCWGIPVIYG 308 (374)
T ss_dssp CCS--SE-EECCSSSCH-HHHGGGEEEEEECSS--SSSSCCCCCHHHHTTTCCEEEC
T ss_pred CCC--cE-EEECCHHHH-HHHHHhCCEEEECCc--ccCCCCcCHHHHHHhCCCEEEC
Confidence 1 24 445554445 578999999888776 5 44578899999999999954
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=90.52 E-value=2.8 Score=44.74 Aligned_cols=114 Identities=5% Similarity=0.017 Sum_probs=68.6
Q ss_pred HHHHHHHhCCCCCCCC-ceeeeccccchh-hhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEE-ecCCccCHHHHH
Q 005402 406 VSFIKEKTGYSVSPDA-MFDIQVKRIHEY-KRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFG-GKAFATYVQAKR 482 (698)
Q Consensus 406 ~~~l~~~~g~~~~~~~-~~~~~v~R~~~y-KR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~-Gka~p~~~~~K~ 482 (698)
.+.+++++|+ ++++. .+.+...|.... |+... ++..+.++.+- ..++++|+. |.. |. .++
T Consensus 216 ~~~~r~~lg~-l~~~~~~vlv~~hR~~~~~~~~~~-ll~A~~~l~~~-----------~~~~~~v~~~g~~-~~---~~~ 278 (396)
T 3dzc_A 216 QATLESQFPM-LDASKKLILVTGHRRESFGGGFER-ICQALITTAEQ-----------HPECQILYPVHLN-PN---VRE 278 (396)
T ss_dssp HHHHHHTCTT-CCTTSEEEEEECSCBCCCTTHHHH-HHHHHHHHHHH-----------CTTEEEEEECCBC-HH---HHH
T ss_pred HHHHHHHhCc-cCCCCCEEEEEECCcccchhHHHH-HHHHHHHHHHh-----------CCCceEEEEeCCC-hH---HHH
Confidence 4667778883 12333 345567675544 66555 77777665432 125788885 533 32 222
Q ss_pred HHHHHHHHhhhhcCCCCCCCcceEEEEcCCCH-HHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeec
Q 005402 483 IVKFITDVGATVNHDPEIGDLLKVIFVPDYNV-SVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTL 556 (698)
Q Consensus 483 iIk~i~~~a~~in~dp~~~~~lkvvf~~nY~~-~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~ 556 (698)
. +.+... .. + +|.|++..+- ++. .++++||+++-+| |+.+.-|+..|.+.|.+.
T Consensus 279 ~---l~~~~~---~~----~--~v~~~~~lg~~~~~-~l~~~ad~vv~~S-------Gg~~~EA~a~G~PvV~~~ 333 (396)
T 3dzc_A 279 P---VNKLLK---GV----S--NIVLIEPQQYLPFV-YLMDRAHIILTDS-------GGIQEEAPSLGKPVLVMR 333 (396)
T ss_dssp H---HHHHTT---TC----T--TEEEECCCCHHHHH-HHHHHCSEEEESC-------SGGGTTGGGGTCCEEECC
T ss_pred H---HHHHHc---CC----C--CEEEeCCCCHHHHH-HHHHhcCEEEECC-------ccHHHHHHHcCCCEEEcc
Confidence 2 333221 11 2 6888766653 444 8899999998665 555589999999998763
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=89.20 E-value=3.4 Score=44.38 Aligned_cols=101 Identities=7% Similarity=-0.018 Sum_probs=62.2
Q ss_pred ceeeeccccchh-hhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 422 MFDIQVKRIHEY-KRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 422 ~~~~~v~R~~~y-KR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
.+.+.+.|.... |+... ++..+.++.+- ..+++||+.+-..| ..++. +.+... ..
T Consensus 226 ~vlv~~~r~~~~~~~l~~-ll~a~~~l~~~-----------~~~~~~v~~~~~~~---~~~~~---l~~~~~---~~--- 281 (403)
T 3ot5_A 226 LILMTAHRRENLGEPMQG-MFEAVREIVES-----------REDTELVYPMHLNP---AVREK---AMAILG---GH--- 281 (403)
T ss_dssp EEEECCCCHHHHTTHHHH-HHHHHHHHHHH-----------CTTEEEEEECCSCH---HHHHH---HHHHHT---TC---
T ss_pred EEEEEeCcccccCcHHHH-HHHHHHHHHHh-----------CCCceEEEecCCCH---HHHHH---HHHHhC---CC---
Confidence 455677887665 54444 66766665432 12578888632223 12222 333221 11
Q ss_pred CCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeec
Q 005402 501 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTL 556 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~ 556 (698)
+ +|.|++..+-.--..+++.||+.+-+| |+.++-|+..|.+.|.+.
T Consensus 282 -~--~v~l~~~l~~~~~~~l~~~ad~vv~~S-------Gg~~~EA~a~g~PvV~~~ 327 (403)
T 3ot5_A 282 -E--RIHLIEPLDAIDFHNFLRKSYLVFTDS-------GGVQEEAPGMGVPVLVLR 327 (403)
T ss_dssp -T--TEEEECCCCHHHHHHHHHHEEEEEECC-------HHHHHHGGGTTCCEEECC
T ss_pred -C--CEEEeCCCCHHHHHHHHHhcCEEEECC-------ccHHHHHHHhCCCEEEec
Confidence 2 688888666545566889999988554 666689999999998664
No 35
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=87.40 E-value=4.1 Score=46.95 Aligned_cols=116 Identities=10% Similarity=0.032 Sum_probs=69.8
Q ss_pred hCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEE-EecCCccCHHHHHHHHHHHHHh
Q 005402 413 TGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIF-GGKAFATYVQAKRIVKFITDVG 491 (698)
Q Consensus 413 ~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If-~Gka~p~~~~~K~iIk~i~~~a 491 (698)
+|++-+.+.++.+-..|+ +|..+- ++....++++- .|. .+-+++ .|.+. +- ....++.+.+..
T Consensus 433 ~~lp~~~G~v~Fg~fn~~--~Ki~p~-~l~~WarIL~~---vP~-------s~L~l~~~g~~~-g~--~~~~~~~~~~~G 496 (631)
T 3q3e_A 433 YLLRENPEVVNIGIASTT--MKLNPY-FLEALKAIRDR---AKV-------KVHFHFALGQSN-GI--THPYVERFIKSY 496 (631)
T ss_dssp CCCCSCCSEEEEEEEECS--TTCCHH-HHHHHHHHHHH---CSS-------EEEEEEEESSCC-GG--GHHHHHHHHHHH
T ss_pred ccCCcCCCeEEEEECCcc--ccCCHH-HHHHHHHHHHh---CCC-------cEEEEEecCCCc-hh--hHHHHHHHHHcC
Confidence 344332336777777775 788887 88877776542 111 233333 55432 21 223344443322
Q ss_pred hhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc
Q 005402 492 ATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 558 (698)
Q Consensus 492 ~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG 558 (698)
| .+ +|.|..--.-.---..++.|||+|.|+. +. .||+-+-||--|++.| |+.|
T Consensus 497 --I------~~--Rv~F~g~~p~~e~la~y~~aDIfLDpfp--y~-GgtTtlEALwmGVPVV-Tl~G 549 (631)
T 3q3e_A 497 --L------GD--SATAHPHSPYHQYLRILHNCDMMVNPFP--FG-NTNGIIDMVTLGLVGV-CKTG 549 (631)
T ss_dssp --H------GG--GEEEECCCCHHHHHHHHHTCSEEECCSS--SC-CSHHHHHHHHTTCCEE-EECC
T ss_pred --C------Cc--cEEEcCCCCHHHHHHHHhcCcEEEeCCc--cc-CChHHHHHHHcCCCEE-eccC
Confidence 2 23 7888876543322356899999999985 65 5999999999998655 7776
No 36
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=80.63 E-value=12 Score=38.95 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=30.2
Q ss_pred eEEEEcCCCHHHHHhhccccccccccCCCcccCCC-chhhHHHhcCceeeeec
Q 005402 505 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASG-TSNMKFAMNGCILIGTL 556 (698)
Q Consensus 505 kvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasG-ts~Mka~~NG~l~ist~ 556 (698)
+|.|..--+ + ..+++.||+++.. || ++-+-||..|.+.|++-
T Consensus 293 ~v~~~~~~~--~-~~~l~~ad~~v~~-------~g~~t~~Ea~a~G~P~v~~p 335 (412)
T 3otg_A 293 NVRLESWVP--Q-AALLPHVDLVVHH-------GGSGTTLGALGAGVPQLSFP 335 (412)
T ss_dssp TEEEESCCC--H-HHHGGGCSEEEES-------CCHHHHHHHHHHTCCEEECC
T ss_pred cEEEeCCCC--H-HHHHhcCcEEEEC-------CchHHHHHHHHhCCCEEecC
Confidence 566654433 3 3577889999854 34 77899999999999653
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=79.03 E-value=7.6 Score=41.54 Aligned_cols=136 Identities=21% Similarity=0.224 Sum_probs=80.9
Q ss_pred HHHHHHhCCCCCCCCceeeeccccchh---hhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHH
Q 005402 407 SFIKEKTGYSVSPDAMFDIQVKRIHEY---KRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRI 483 (698)
Q Consensus 407 ~~l~~~~g~~~~~~~~~~~~v~R~~~y---KR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~i 483 (698)
..+++++|++ ++..+.+...|..+. |+... ++..+.++.+- . ++++|+.. ||. -+
T Consensus 192 ~~~~~~lgl~--~~~~iLvt~hr~e~~~~~~~l~~-ll~al~~l~~~-----------~-~~~vv~p~--~p~---~~-- 249 (385)
T 4hwg_A 192 SDILDKLSLT--PKQYFLISSHREENVDVKNNLKE-LLNSLQMLIKE-----------Y-NFLIIFST--HPR---TK-- 249 (385)
T ss_dssp CCHHHHTTCC--TTSEEEEEECCC-----CHHHHH-HHHHHHHHHHH-----------H-CCEEEEEE--CHH---HH--
T ss_pred hHHHHHcCCC--cCCEEEEEeCCchhcCcHHHHHH-HHHHHHHHHhc-----------C-CeEEEEEC--ChH---HH--
Confidence 3567788864 344566666665433 44554 77776665431 1 56888853 453 22
Q ss_pred HHHHHHH-hhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecccc-ch
Q 005402 484 VKFITDV-GATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA-NV 561 (698)
Q Consensus 484 Ik~i~~~-a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw-~v 561 (698)
+.+.++ .. +... . +|.+++..+..--..++++||+.+ +. ||+.+.-|+.-|.+.|.+.+.- +.
T Consensus 250 -~~l~~~~~~-~~~~----~--~v~l~~~lg~~~~~~l~~~adlvv--t~-----SGgv~~EA~alG~Pvv~~~~~ter~ 314 (385)
T 4hwg_A 250 -KRLEDLEGF-KELG----D--KIRFLPAFSFTDYVKLQMNAFCIL--SD-----SGTITEEASILNLPALNIREAHERP 314 (385)
T ss_dssp -HHHHTSGGG-GGTG----G--GEEECCCCCHHHHHHHHHHCSEEE--EC-----CTTHHHHHHHTTCCEEECSSSCSCT
T ss_pred -HHHHHHHHH-hcCC----C--CEEEEcCCCHHHHHHHHHhCcEEE--EC-----CccHHHHHHHcCCCEEEcCCCccch
Confidence 223222 10 1111 2 688887777544568899999998 33 5888899999999999888865 56
Q ss_pred hhhhhccCcceeecccchhhh
Q 005402 562 EIRQEVGEENFFLFGARAHEI 582 (698)
Q Consensus 562 Ei~~~~G~~N~~~fG~~~d~V 582 (698)
|.+++ | +..+.|...+++
T Consensus 315 e~v~~-G--~~~lv~~d~~~i 332 (385)
T 4hwg_A 315 EGMDA-G--TLIMSGFKAERV 332 (385)
T ss_dssp HHHHH-T--CCEECCSSHHHH
T ss_pred hhhhc-C--ceEEcCCCHHHH
Confidence 76543 2 334455444444
No 38
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=70.52 E-value=1 Score=53.19 Aligned_cols=71 Identities=14% Similarity=0.051 Sum_probs=51.0
Q ss_pred ecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCC--CCHHHHHHhhccCCCCCCCccccccCChhHHHHHHH
Q 005402 574 LFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGS--YNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQE 650 (698)
Q Consensus 574 ~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~--~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~ 650 (698)
.+|.+.++++++..+ + ..++|| |+. .+..+++.. .
T Consensus 643 ~iGtLDGanvEi~e~--------------v--G~~NgF~FG~~~~ev~~l~~~-y------------------------- 680 (796)
T 2c4m_A 643 TLGTMDGANVEIVDS--------------V--GEENAYIFGARVEELPALRES-Y------------------------- 680 (796)
T ss_dssp EEEESSTHHHHHHHH--------------H--CGGGSEEESCCTTTHHHHHHT-C-------------------------
T ss_pred EEeccCCeEeehhhh--------------c--CCCcEEEecCchhhHHHHHHh-h-------------------------
Confidence 457888888766532 1 347888 876 567777776 3
Q ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 651 KVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 651 ~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
++..+|.+...|.+++.+.|+ ++|||+.+ .+|.+..
T Consensus 681 ~a~~~y~~~~~~~~vvd~~~~--g~fs~~~~-~~y~~Ly 716 (796)
T 2c4m_A 681 KPYELYETVPGLKRALDALDN--GTLNDNNS-GLFYDLK 716 (796)
T ss_dssp CHHHHHHHSTTHHHHHHTTTS--SSSCCTTC-CHHHHHH
T ss_pred ChHHHhhcCHHHHHHHHHHHc--CCCCCCCH-HHHHHHH
Confidence 777877544489999999886 89999887 6665543
No 39
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=68.40 E-value=1.7 Score=51.34 Aligned_cols=74 Identities=11% Similarity=0.075 Sum_probs=49.4
Q ss_pred ecccchhhhhhhhhccCCCCCCCChhHHHHHhhhhcCC-CCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHH
Q 005402 574 LFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV-FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKV 652 (698)
Q Consensus 574 ~fG~~~d~V~~~~~~~~~~~~~~~~~~~~v~~~~~~G~-F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a 652 (698)
.+|.+.++++++..+ + ..++|| |+. +++++.+.-... .++
T Consensus 653 ~iGtLDGanvEi~e~--------------v--G~~NgF~FG~-~~~ev~~l~~~~----------------------y~a 693 (796)
T 1l5w_A 653 TVGTLDGANVEIAEK--------------V--GEENIFIFGH-TVEQVKAILAKG----------------------YDP 693 (796)
T ss_dssp EEECSCTTHHHHHHH--------------H--CGGGSEECSC-CHHHHHHHHHHC----------------------CCH
T ss_pred eecCcCCeeeehhhc--------------c--CCCcEEEecC-CHHHHHHHHHcc----------------------cCH
Confidence 457888888766532 1 347888 877 666665332210 167
Q ss_pred HHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 005402 653 DEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDI 689 (698)
Q Consensus 653 ~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~i 689 (698)
..+|.+...|.+++.+.|+ ++|||+.+ .+|.+..
T Consensus 694 ~~~y~~~~~~~~vvd~~~~--g~fs~~~~-~~y~~Ly 727 (796)
T 1l5w_A 694 VKWRKKDKVLDAVLKELES--GKYSDGDK-HAFDQML 727 (796)
T ss_dssp HHHHHHCHHHHHHHHHHHH--TTTTTTCT-TTTHHHH
T ss_pred HHHhhcCHHHHHHHHHHHc--CCCCCCcH-HHHHHHH
Confidence 7777544489999999997 79999886 6665543
No 40
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=61.28 E-value=29 Score=36.01 Aligned_cols=44 Identities=11% Similarity=0.258 Sum_probs=30.4
Q ss_pred eEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeecc
Q 005402 505 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD 557 (698)
Q Consensus 505 kvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~D 557 (698)
+|.|+.-. .+ ..+++.||++.. ++.+.+-+-||..|++.|.+-.
T Consensus 285 ~v~~~~~~--~~-~~ll~~ad~~v~------~gG~~t~~Ea~~~G~P~v~~p~ 328 (398)
T 4fzr_A 285 GVLAAGQF--PL-SAIMPACDVVVH------HGGHGTTLTCLSEGVPQVSVPV 328 (398)
T ss_dssp TEEEESCC--CH-HHHGGGCSEEEE------CCCHHHHHHHHHTTCCEEECCC
T ss_pred cEEEeCcC--CH-HHHHhhCCEEEe------cCCHHHHHHHHHhCCCEEecCC
Confidence 56666543 33 456778999983 2334778999999999986533
No 41
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=55.48 E-value=39 Score=35.36 Aligned_cols=43 Identities=9% Similarity=0.011 Sum_probs=30.2
Q ss_pred eEEEEcCCCHHHHHhhccccccccccCCCcccCCC-chhhHHHhcCceeeeecc
Q 005402 505 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASG-TSNMKFAMNGCILIGTLD 557 (698)
Q Consensus 505 kvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasG-ts~Mka~~NG~l~ist~D 557 (698)
+|.|+.--+- . .+++.||+++.. || .+-+-||..|.+.|++-.
T Consensus 284 ~v~~~~~~~~-~--~~l~~ad~~v~~-------~G~~t~~Ea~~~G~P~i~~p~ 327 (430)
T 2iyf_A 284 NVEVHDWVPQ-L--AILRQADLFVTH-------AGAGGSQEGLATATPMIAVPQ 327 (430)
T ss_dssp TEEEESSCCH-H--HHHTTCSEEEEC-------CCHHHHHHHHHTTCCEEECCC
T ss_pred CeEEEecCCH-H--HHhhccCEEEEC-------CCccHHHHHHHhCCCEEECCC
Confidence 5666543332 2 578999998753 56 467899999999997643
No 42
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=37.60 E-value=2.8e+02 Score=28.45 Aligned_cols=91 Identities=12% Similarity=0.015 Sum_probs=53.0
Q ss_pred ceeeeccccchh-hhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHHHhhhhcCCCCC
Q 005402 422 MFDIQVKRIHEY-KRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 500 (698)
Q Consensus 422 ~~~~~v~R~~~y-KR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~~a~~in~dp~~ 500 (698)
++.+.+.++... |+..+ +...++.+.++ +.++|+.+.+... + . + . . .
T Consensus 234 ~v~v~~G~~~~~~~~~~~-~~~~~~~l~~~-------------~~~~v~~~g~~~~-~-~------l---~----~---~ 281 (398)
T 3oti_A 234 EVAITMGTIELQAFGIGA-VEPIIAAAGEV-------------DADFVLALGDLDI-S-P------L---G----T---L 281 (398)
T ss_dssp EEEECCTTTHHHHHCGGG-HHHHHHHHHTS-------------SSEEEEECTTSCC-G-G------G---C----S---C
T ss_pred EEEEEcCCCccccCcHHH-HHHHHHHHHcC-------------CCEEEEEECCcCh-h-h------h---c----c---C
Confidence 455667888766 56666 54444443221 5677776654321 1 0 1 1 1 2
Q ss_pred CCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeee
Q 005402 501 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGT 555 (698)
Q Consensus 501 ~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist 555 (698)
++ +|.|+.-. .+. .+++.||++... +.+.+-+-||..|.+.|.+
T Consensus 282 ~~--~v~~~~~~--~~~-~ll~~ad~~v~~------~G~~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 282 PR--NVRAVGWT--PLH-TLLRTCTAVVHH------GGGGTVMTAIDAGIPQLLA 325 (398)
T ss_dssp CT--TEEEESSC--CHH-HHHTTCSEEEEC------CCHHHHHHHHHHTCCEEEC
T ss_pred CC--cEEEEccC--CHH-HHHhhCCEEEEC------CCHHHHHHHHHhCCCEEEc
Confidence 34 56666444 344 456779999843 2235678999999998864
No 43
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=31.38 E-value=13 Score=44.18 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=28.0
Q ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHH
Q 005402 651 KVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYAR 687 (698)
Q Consensus 651 ~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~ 687 (698)
++..+|.+..+|.+++.+.|+ ++|||+.+ .+|.+
T Consensus 716 ~a~~~Y~~~~~l~~v~d~i~~--g~fs~~~~-~~y~~ 749 (824)
T 2gj4_A 716 NAQEYYDRIPELRQIIEQLSS--GFFSPKQP-DLFKD 749 (824)
T ss_dssp CHHHHHHHCHHHHHHHHHHHH--TTTCTTST-TTTHH
T ss_pred CHHHHhcCCHHHHHHHHHHHh--CCCCCCCh-HHHHH
Confidence 688889888899999999885 89999876 55544
No 44
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=30.21 E-value=36 Score=30.56 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=29.5
Q ss_pred ccceEecCCCc---ccchHHHHHHHHHHhcCCCHHHHHHHhccc
Q 005402 242 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 282 (698)
Q Consensus 242 ~~~~ihlNE~H---pa~~i~El~R~l~d~~gl~~~~A~~iv~~~ 282 (698)
.++.+|+.-|. +++++.-||+ ..|+++++|++.+++.
T Consensus 82 ~~VlVHC~~G~sRS~~~v~ayLm~----~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 82 GVVLVHSNAGVSRAAAIVIGFLMN----SEQTSFTSAFSLVKNA 121 (144)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHH----HHCCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 47899999998 5666665555 5799999999988865
No 45
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=29.80 E-value=6.9e+02 Score=28.69 Aligned_cols=120 Identities=14% Similarity=0.129 Sum_probs=75.2
Q ss_pred eEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccCcceeecccchhhhhh
Q 005402 505 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAG 584 (698)
Q Consensus 505 kvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~~N~~~fG~~~d~V~~ 584 (698)
||+|.+--...-=-..+.-+||+|-|.- + ..||+.+-|+--|+ ||.|+-|-.. .+
T Consensus 581 r~~f~~~~~~~~~l~~~~~~Di~LDt~p--~-~g~tT~~eal~~Gv-Pvvt~~g~~~-----~s---------------- 635 (723)
T 4gyw_A 581 RIIFSPVAPKEEHVRRGQLADVCLDTPL--C-NGHTTGMDVLWAGT-PMVTMPGETL-----AS---------------- 635 (723)
T ss_dssp GEEEEECCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHHHHTTC-CEEBCCCSSG-----GG----------------
T ss_pred eEEECCCCCHHHHHHHhCCCeEEeCCCC--c-CCHHHHHHHHHcCC-CEEEccCCCc-----cH----------------
Confidence 8888875443222235688999998754 6 56788888988887 5557776111 00
Q ss_pred hhhccCCCCCCCChhHHHHHhhhhcCCCCCCCHHHHHHhhccCCCCCCCccccccCChhHHHHHHHHHHHHhcCHHH---
Q 005402 585 LRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKR--- 661 (698)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~v~~~~~~G~F~~~~~~~l~~~l~~~~~~~~~D~y~v~~Df~sy~~aq~~a~~~Y~d~~~--- 661 (698)
--..+|+..+.- +-+|..|-++|++ +|..+=.|++.
T Consensus 636 ------------------------------R~~~s~l~~~gl--------~e~ia~~~~~Y~~---~a~~la~d~~~l~~ 674 (723)
T 4gyw_A 636 ------------------------------RVAASQLTCLGC--------LELIAKNRQEYED---IAVKLGTDLEYLKK 674 (723)
T ss_dssp ------------------------------THHHHHHHHHTC--------GGGBCSSHHHHHH---HHHHHHHCHHHHHH
T ss_pred ------------------------------hHHHHHHHHcCC--------cccccCCHHHHHH---HHHHHhcCHHHHHH
Confidence 013344555531 1268888899985 56666666554
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHH---HHHh
Q 005402 662 WTRMSIMNTAGSSKFSSDRTIQEYA---RDIW 690 (698)
Q Consensus 662 W~~~~~~~ma~~~~FS~drsi~eY~---~~iw 690 (698)
..+..+.++..+.=|...+-+++.. +.+|
T Consensus 675 lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w 706 (723)
T 4gyw_A 675 VRGKVWKQRISSPLFNTKQYTMELERLYLQMW 706 (723)
T ss_dssp HHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHH
Confidence 4555566676677888887766654 4555
No 46
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=26.45 E-value=47 Score=29.60 Aligned_cols=37 Identities=22% Similarity=0.390 Sum_probs=28.9
Q ss_pred ccceEecCCCc---ccchHHHHHHHHHHhcCCCHHHHHHHhccc
Q 005402 242 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 282 (698)
Q Consensus 242 ~~~~ihlNE~H---pa~~i~El~R~l~d~~gl~~~~A~~iv~~~ 282 (698)
.++.+|+.-|. +++++.-||+ ..|+++++|++.+++.
T Consensus 82 ~~VlVHC~~G~~RS~~~~~aylm~----~~~~~~~~A~~~v~~~ 121 (144)
T 3ezz_A 82 GRVLVHSQAGISRSATICLAYLMM----KKRVRLEEAFEFVKQR 121 (144)
T ss_dssp CCEEEEESSSSSHHHHHHHHHHHH----HHTCCHHHHHHHHHTT
T ss_pred CeEEEECCCCCChhHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 47899999998 4555554444 5799999999999876
No 47
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=26.32 E-value=42 Score=31.01 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=30.0
Q ss_pred ccceEecCCCc---ccchHHHHHHHHHHhcCCCHHHHHHHhccc
Q 005402 242 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 282 (698)
Q Consensus 242 ~~~~ihlNE~H---pa~~i~El~R~l~d~~gl~~~~A~~iv~~~ 282 (698)
.++.+|+.-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 88 ~~VlVHC~~G~sRS~~vv~ayLm~----~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 88 EGVLIISGTGVNKAPAIVIAFLMY----YQRLSFINAFNKVQGL 127 (161)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHHH----HhCCCHHHHHHHHHHH
Confidence 46799999998 6666666665 5799999999998865
No 48
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=24.41 E-value=3e+02 Score=27.52 Aligned_cols=46 Identities=17% Similarity=0.095 Sum_probs=34.9
Q ss_pred EEEEc-CCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccc
Q 005402 506 VIFVP-DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 558 (698)
Q Consensus 506 vvf~~-nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DG 558 (698)
++.+. ..+..-..-+++.||+++-+. ||+..| |+.-|++.|+....
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~l~I~~D------sg~~Hl-Aaa~g~P~v~lfg~ 289 (348)
T 1psw_A 243 CRNLAGETQLDQAVILIAACKAIVTND------SGLMHV-AAALNRPLVALYGP 289 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEES------SHHHHH-HHHTTCCEEEEESS
T ss_pred eEeccCcCCHHHHHHHHHhCCEEEecC------CHHHHH-HHHcCCCEEEEECC
Confidence 54444 366777778899999999766 688888 77789999976544
No 49
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=22.92 E-value=3.7e+02 Score=27.21 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=28.3
Q ss_pred eEEEEcCCCHHHHHhhccccccccccCCCcccCCC-chhhHHHhcCceeeee
Q 005402 505 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASG-TSNMKFAMNGCILIGT 555 (698)
Q Consensus 505 kvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasG-ts~Mka~~NG~l~ist 555 (698)
+|.++.-.+ ... +++.||+++.. +| .+-+-||..|.+.|.+
T Consensus 271 ~v~~~~~~~--~~~-ll~~ad~~v~~-------~G~~t~~Ea~~~G~P~v~~ 312 (391)
T 3tsa_A 271 NARIAESVP--LNL-FLRTCELVICA-------GGSGTAFTATRLGIPQLVL 312 (391)
T ss_dssp TEEECCSCC--GGG-TGGGCSEEEEC-------CCHHHHHHHHHTTCCEEEC
T ss_pred CEEEeccCC--HHH-HHhhCCEEEeC-------CCHHHHHHHHHhCCCEEec
Confidence 566554333 333 44999999842 45 4779999999999865
Done!