Query 005404
Match_columns 698
No_of_seqs 308 out of 1475
Neff 6.7
Searched_HMMs 29240
Date Tue Mar 26 00:23:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005404.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005404hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e8d_A Glycosyl hydrolase, fam 100.0 8E-102 3E-106 873.0 36.3 432 1-577 126-586 (595)
2 3thd_A Beta-galactosidase; TIM 100.0 1.4E-97 5E-102 844.6 36.3 442 1-577 135-620 (654)
3 3d3a_A Beta-galactosidase; pro 100.0 1.3E-94 4.5E-99 827.2 33.9 449 1-589 132-601 (612)
4 1tg7_A Beta-galactosidase; TIM 100.0 4.5E-77 1.5E-81 708.9 37.5 533 1-575 130-946 (971)
5 3og2_A Beta-galactosidase; TIM 100.0 1.6E-70 5.6E-75 642.4 44.9 530 1-574 150-977 (1003)
6 2jx9_A Latrophilin 1; lectin, 99.9 2.8E-24 9.4E-29 193.3 7.5 88 604-693 12-104 (106)
7 2zx2_A CSL3; lectin, rhamnose, 99.8 1.6E-21 5.3E-26 194.0 7.4 89 604-695 5-100 (195)
8 2zx2_A CSL3; lectin, rhamnose, 99.8 6.7E-21 2.3E-25 189.5 7.3 84 604-690 105-195 (195)
9 1kwg_A Beta-galactosidase; TIM 98.0 5.2E-05 1.8E-09 88.0 15.4 87 95-193 305-391 (645)
10 3u7v_A Beta-galactosidase; str 98.0 1.5E-06 5.1E-11 97.6 1.8 50 1-58 177-226 (552)
11 3fn9_A Putative beta-galactosi 97.2 0.0015 5.2E-08 76.2 12.6 98 317-421 58-160 (692)
12 3tty_A Beta-GAL, beta-galactos 97.2 0.0049 1.7E-07 71.8 16.3 93 93-196 298-390 (675)
13 3lpf_A Beta-glucuronidase; alp 97.1 0.0019 6.5E-08 74.3 12.0 98 317-421 65-181 (605)
14 3gm8_A Glycoside hydrolase fam 97.1 0.0017 5.9E-08 77.0 11.5 96 318-422 65-160 (801)
15 3hn3_A Beta-G1, beta-glucuroni 97.0 0.0015 5.2E-08 75.2 9.8 76 317-396 75-155 (613)
16 3cmg_A Putative beta-galactosi 96.9 0.0042 1.4E-07 72.3 12.2 98 317-421 47-148 (667)
17 3bga_A Beta-galactosidase; NYS 96.7 0.0055 1.9E-07 74.4 11.3 96 317-421 124-223 (1010)
18 1vem_A Beta-amylase; beta-alph 96.4 0.00018 6.3E-09 81.1 -3.8 132 3-151 140-295 (516)
19 1yq2_A Beta-galactosidase; gly 96.4 0.007 2.4E-07 73.6 9.5 98 318-422 117-219 (1024)
20 1jz7_A Lactase, beta-galactosi 96.1 0.01 3.5E-07 72.2 9.3 96 318-421 118-217 (1023)
21 2vzs_A CSXA, EXO-beta-D-glucos 96.1 0.0084 2.9E-07 73.1 8.4 98 318-421 118-224 (1032)
22 3oba_A Beta-galactosidase; TIM 96.1 0.0086 3E-07 72.8 8.3 100 318-422 111-211 (1032)
23 1yq2_A Beta-galactosidase; gly 95.6 0.035 1.2E-06 67.5 10.6 160 5-189 419-612 (1024)
24 3fn9_A Putative beta-galactosi 95.5 0.022 7.5E-07 66.5 8.3 66 468-560 59-128 (692)
25 3lpf_A Beta-glucuronidase; alp 95.4 0.035 1.2E-06 63.8 9.2 65 468-559 66-134 (605)
26 2je8_A Beta-mannosidase; glyco 95.2 0.024 8.2E-07 67.7 7.6 71 320-395 65-135 (848)
27 3cmg_A Putative beta-galactosi 94.9 0.058 2E-06 62.6 9.2 66 468-560 48-117 (667)
28 3gm8_A Glycoside hydrolase fam 94.7 0.053 1.8E-06 64.3 8.3 66 468-560 65-133 (801)
29 3hn3_A Beta-G1, beta-glucuroni 94.4 0.035 1.2E-06 63.8 5.8 65 469-560 77-151 (613)
30 3bga_A Beta-galactosidase; NYS 94.1 0.08 2.7E-06 64.3 8.4 66 468-560 125-193 (1010)
31 2je8_A Beta-mannosidase; glyco 94.1 0.06 2E-06 64.3 7.2 64 470-560 65-132 (848)
32 3og2_A Beta-galactosidase; TIM 93.5 0.31 1.1E-05 58.3 11.5 40 469-508 711-752 (1003)
33 1jz7_A Lactase, beta-galactosi 92.9 0.11 3.9E-06 63.0 6.8 65 468-559 118-186 (1023)
34 1tg7_A Beta-galactosidase; TIM 92.9 0.28 9.5E-06 59.1 10.0 75 317-397 849-932 (971)
35 3oba_A Beta-galactosidase; TIM 92.8 0.093 3.2E-06 63.8 5.8 66 468-560 111-180 (1032)
36 2vzs_A CSXA, EXO-beta-D-glucos 90.3 0.4 1.4E-05 58.4 7.7 68 469-560 119-187 (1032)
37 2okx_A Rhamnosidase B; alpha b 80.7 13 0.00043 44.9 13.9 107 318-435 21-131 (956)
38 2wnw_A Activated by transcript 76.8 12 0.00042 41.0 11.2 227 4-252 170-438 (447)
39 2okx_A Rhamnosidase B; alpha b 75.9 4.7 0.00016 48.6 8.2 41 469-510 22-63 (956)
40 3pzg_A Mannan endo-1,4-beta-ma 75.3 2.9 9.8E-05 45.1 5.5 50 17-66 172-221 (383)
41 3cih_A Putative alpha-rhamnosi 69.5 5.6 0.00019 46.5 6.5 38 468-508 56-93 (739)
42 3d3a_A Beta-galactosidase; pro 65.5 14 0.00046 42.4 8.4 69 318-397 506-575 (612)
43 4hty_A Cellulase; (alpha/beta) 54.0 66 0.0022 33.6 10.9 47 21-67 177-227 (359)
44 4e8d_A Glycosyl hydrolase, fam 49.2 38 0.0013 38.4 8.4 71 317-397 503-573 (595)
45 2nt0_A Glucosylceramidase; cer 48.9 31 0.001 38.3 7.6 219 20-252 222-490 (497)
46 2y24_A Xylanase; hydrolase, GH 46.5 80 0.0028 33.5 10.2 110 93-231 214-326 (383)
47 4g6v_B CDII; tRNAse, toxin, im 42.3 6.8 0.00023 33.4 0.6 28 6-36 72-101 (111)
48 3clw_A Conserved exported prot 39.7 4.1E+02 0.014 29.1 14.9 62 4-68 160-230 (507)
49 3kl0_A Glucuronoxylanase XYNC; 38.0 1.2E+02 0.0042 32.4 10.0 80 93-191 220-299 (401)
50 4esn_A Hypothetical protein; p 34.0 1.7E+02 0.0058 25.4 8.3 75 494-625 18-93 (104)
51 3civ_A Endo-beta-1,4-mannanase 33.7 1.2E+02 0.004 31.8 8.8 41 21-67 162-202 (343)
52 1rh9_A Endo-beta-mannanase; en 33.0 46 0.0016 34.7 5.5 49 19-67 164-212 (373)
53 3thd_A Beta-galactosidase; TIM 30.3 1.2E+02 0.0041 34.7 8.6 76 317-397 523-600 (654)
54 1xyz_A 1,4-beta-D-xylan-xylano 29.8 18 0.00062 38.1 1.7 50 22-71 144-200 (347)
55 3cih_A Putative alpha-rhamnosi 26.1 46 0.0016 38.7 4.4 58 318-396 56-113 (739)
56 3cui_A EXO-beta-1,4-glucanase; 25.3 40 0.0014 34.8 3.3 49 22-70 116-171 (315)
57 1ur4_A Galactanase; hydrolase, 24.8 3.7E+02 0.013 28.7 10.9 26 159-185 366-391 (399)
58 2bgo_A Endo-B1,4-mannanase 5C; 23.2 1.1E+02 0.0037 28.1 5.3 40 354-394 66-105 (140)
59 1nkg_A Rhamnogalacturonase B; 22.8 75 0.0026 35.3 5.0 62 494-565 428-489 (508)
60 2w3j_A Carbohydrate binding mo 22.1 94 0.0032 28.2 4.8 41 352-393 68-112 (145)
61 1i1w_A Endo-1,4-beta-xylanase; 21.0 62 0.0021 33.2 3.7 145 22-186 120-301 (303)
No 1
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=100.00 E-value=7.5e-102 Score=872.96 Aligned_cols=432 Identities=27% Similarity=0.481 Sum_probs=339.7
Q ss_pred ChhHHHHHHHHHhccCceeccCCcEEEEEeccccCCccccCCCCcHHHHHHHHHHHHhCCCCcceEeecCCC-------C
Q 005404 1 MQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDD-------A 73 (698)
Q Consensus 1 ~~~~~~~i~~~l~~~~l~~~~GGPII~vQvENEYG~~~~~~g~~d~~Ym~~L~~~a~~~Gi~vp~~~~~~~~-------~ 73 (698)
|++|+++|+++|+ ++|+++||||||+|||||||++ + +|++||+||+++++++|++||||||++.+ .
T Consensus 126 ~~~~~~~l~~~l~--~~~~~~GgpVI~~QvENEyG~~----~-~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~ 198 (595)
T 4e8d_A 126 VGRYYDQLLPRLV--PRLLDNGGNILMMQVENEYGSY----G-EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGT 198 (595)
T ss_dssp HHHHHHHHGGGTG--GGBGGGTSCEEEEESSSSGGGT----C-CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHC
T ss_pred HHHHHHHHHHHHH--HHhcccCCCEEEEEcccccccc----C-CcHHHHHHHHHHHHHcCCcEEEEEccCcchhcccCCc
Confidence 4789999999999 9999999999999999999984 5 89999999999999999999999999853 2
Q ss_pred C--CccccCCC-Cccc-ccCC------CCCCCC-CceeeeccCccccccCCCcCCCCHHHHHHHHHHHHHcCCceeeeeE
Q 005404 74 P--DPVINSCN-GFYC-DAFS------PNKPYK-PTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYM 142 (698)
Q Consensus 74 ~--~~v~~~~n-g~~~-~~f~------~~~p~~-P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM 142 (698)
. +++++|+| |.++ +.|. +..|++ |+|++|||+||||+||++++.+++++++..++++|++| + +||||
T Consensus 199 ~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g-s-~N~YM 276 (595)
T 4e8d_A 199 LIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKWPLMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQG-S-INLYM 276 (595)
T ss_dssp CGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCCCCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHS-E-EEEEE
T ss_pred cCCCCeEEEeeCCCchhHhHHHHHHhhhcCCCCCCeEEEeeccccccccCCCCCCCCHHHHHHHHHHHHHcC-C-ceEEe
Confidence 2 56788888 5555 3332 345888 99999999999999999999999999999999999999 6 79999
Q ss_pred eeccCCCCCCCCCCc-------ccccccCCCCCCCCCCCCchhHHHHHHHHHHHHhhhccccCCCCcccCCCCcceeeee
Q 005404 143 YHGGTNFGRTAGGPF-------ITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVF 215 (698)
Q Consensus 143 fhGGTNfG~~~G~~~-------~~TSYDY~APl~E~G~~~~~ky~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~~~y 215 (698)
||||||||||||+++ ++|||||||||+|+|++ ||||.+||+++..+. .+ ++..+|. ..++..|
T Consensus 277 ~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~E~G~~-t~Ky~~lr~~i~~~~--~~-~p~~~P~------~~~~~~~ 346 (595)
T 4e8d_A 277 FHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLDEEGNP-TAKYLAVKKMMATHF--SE-YPQLEPL------YKESMEL 346 (595)
T ss_dssp EECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBCTTSCB-CHHHHHHHHHHHHHC--TT-SCCCCCC------CCCBCCE
T ss_pred cccccCcccccCCCCCCCCCCCCCCccCCCCccCcCCCc-cHHHHHHHHHHHHhC--CC-CCCCCCC------CCccccc
Confidence 999999999999862 47999999999999999 699999999976431 11 1111111 1112222
Q ss_pred ecCCcceeeEeeccCCccceEEEeCCeeeecCCCceeecCCCCceeeccceeeeeeeeeecccccccccccccccccccc
Q 005404 216 SAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISS 295 (698)
Q Consensus 216 ~~~~~~~~~Fl~n~~~~~~~~v~~~~~~~~~p~~sv~il~~~~~~~~~t~~v~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 295 (698)
. .|.+.. .. ++ |+. ...+.+|+.+
T Consensus 347 ~-------------------~v~l~~---~~-----~L--------~~~---------------------l~~l~~~~~s 370 (595)
T 4e8d_A 347 D-------------------AIPLVE---KV-----SL--------FET---------------------LDSLSSPVES 370 (595)
T ss_dssp E-------------------EEEEEE---EE-----EH--------HHH---------------------HHHHCCCEEE
T ss_pred c-------------------eEEecc---cc-----cH--------HHh---------------------hhhcCCcccc
Confidence 1 111100 00 00 000 0112345554
Q ss_pred ccCCCccccccchhhcCCCCCCccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceE
Q 005404 296 LGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFT 375 (698)
Q Consensus 296 ~~~~~~~~~p~~~Eql~~t~d~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~ 375 (698)
. .|.+||+|+| .+||+||||+++.... ...|++.++||||+|||||+++|++++..... +
T Consensus 371 ~-------~P~~mE~lgq---~~GyvlY~t~i~~~~~--------~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~~~~--~ 430 (595)
T 4e8d_A 371 L-------YPQKMEELGQ---SYGYLLYRTETNWDAE--------EERLRIIDGRDRAQLYVDGQWVKTQYQTEIGE--D 430 (595)
T ss_dssp S-------SCCBTGGGTC---CSSEEEEEEEEECSSS--------SEEEEEEEEESEEEEEETTEEEEEEEGGGTTS--C
T ss_pred C-------CCCCHHHcCC---CcCeEEEEeccCCCCC--------CceeecCCCceEEEEEECCEEEEEEEcccCcc--e
Confidence 3 4667999988 9999999999975422 24789999999999999999999999864222 2
Q ss_pred EeecccccCCc-CeEEEEEeecCCcccccCC--CccccceeecEEEccccCCCccCccCCcE-EeccCccccccccCCCC
Q 005404 376 FSGPANLRAGI-NKIALLSIAVGLPNVGLHY--ETWETGVRGAVVLHGLDHGNKDLTWQKWS-YQVGLKGEAMNLVSPSE 451 (698)
Q Consensus 376 ~~~~~~l~~g~-~~L~ILven~Gr~N~g~~~--~~~~kGI~g~V~l~g~~~~~~~l~~~~W~-~~~~l~~e~~~~~~~~~ 451 (698)
+ +++...+. ++|+||||||||||||+.| ++++|||+|+|+|+++ .|+ +|+ |.++|+.
T Consensus 431 i--~~~~~~~~~~~L~ILVEN~GRvNyG~~~~~~~~~KGi~g~V~l~~~-----~l~--~W~~~~L~l~~---------- 491 (595)
T 4e8d_A 431 I--FYQGKKKGLSRLDILIENMGRVNYGHKFLADTQRKGIRTGVCKDLH-----FLL--NWKHYPLPLDN---------- 491 (595)
T ss_dssp E--EECCCSSSEEEEEEEEECCCCCCSGGGTTCGGGSCEEEEEEEETTE-----ECC--CEEEEEECCCC----------
T ss_pred E--EeecCCCCCCEEEEEEEcCCCcccCcccCcCCCCCCCCCCeEECCE-----EcC--CcEEEeeccch----------
Confidence 2 23333444 7999999999999999988 5799999999999987 476 899 6777653
Q ss_pred CCCCcccCCCccccccCCceEEEEEEeCCCCCCCeEEEeCCCceEEEEECCeeeeeeeeccccCCCCccccCCCcCCccc
Q 005404 452 ATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINC 531 (698)
Q Consensus 452 ~~~~~w~~~~~~~~~~~~~~~Yr~~F~~p~~~d~~~Ld~~g~gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~ 531 (698)
...++|..... ..+|+|||++|++++..| |||||+|||||+||||||||||||+ +|
T Consensus 492 ~~~~~~~~~~~----~~~P~fy~g~f~~~~~~D-TfLd~~gwgKG~v~VNG~nLGRYW~------------~G------- 547 (595)
T 4e8d_A 492 PEKIDFSKGWT----QGQPAFYAYDFTVEEPKD-TYLDLSEFGKGVAFVNGQNLGRFWN------------VG------- 547 (595)
T ss_dssp GGGCCTTSCCC----TTSCEEEEEEEEESSCCB-EEEECTTCCEEEEEETTEEEEEEET------------TC-------
T ss_pred hhhcccccccC----CCCCeEEEEEEEcCCCCC-EEEeCCCCceEEEEECCeeeecccC------------CC-------
Confidence 11223332211 236899999999977666 9999999999999999999999994 47
Q ss_pred cCCCCCCceeeEecCcccccCCcceEEEEEeeCCCCcceEEEeecc
Q 005404 532 QRRCGHPTQRWYHVPRSWLKPTKNLLVVFEELGGDASRISLVKRSV 577 (698)
Q Consensus 532 ~~~~~~PQqtlY~vP~~~Lk~g~N~ivvfE~~g~~~~~i~~~~~~~ 577 (698)
|||||| ||++|||+|.|+|||||+++.....|+|.++++
T Consensus 548 ------PQ~tLY-vP~~~Lk~G~NeIvvfEl~~~~~~~i~~~~~p~ 586 (595)
T 4e8d_A 548 ------PTLSLY-IPHSYLKEGANRIIIFETEGQYKEEIHLTRKPT 586 (595)
T ss_dssp ------SBCEEE-ECGGGSCSEEEEEEEEESSSCCCSEEEEESSCC
T ss_pred ------CeEEEE-ecHHHhCcCCceEEEEEecCCCCceEEeecccc
Confidence 999999 999999999999999999987778899988763
No 2
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=100.00 E-value=1.4e-97 Score=844.56 Aligned_cols=442 Identities=25% Similarity=0.381 Sum_probs=325.0
Q ss_pred ChhHHHHHHHHHhccCceeccCCcEEEEEeccccCCccccCCCCcHHHHHHHHHHHHhC-CCCcceEeecCCC-------
Q 005404 1 MQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGL-DTGVPWVMCKEDD------- 72 (698)
Q Consensus 1 ~~~~~~~i~~~l~~~~l~~~~GGPII~vQvENEYG~~~~~~g~~d~~Ym~~L~~~a~~~-Gi~vp~~~~~~~~------- 72 (698)
|++|+++|+++|+ ++|+++||||||+|||||||+ |+.+|++||+||+++++++ |++||++|+|+..
T Consensus 135 ~~~~~~~l~~~l~--~~~~~~ggpVI~~QvENEyG~----y~~~d~~Ym~~l~~~~~~~~Gi~v~l~t~D~~~~~~~~~g 208 (654)
T 3thd_A 135 VDKWLGVLLPKMK--PLLYQNGGPVITVQVENEYGS----YFACDFDYLRFLQKRFRHHLGDDVVLFTTDGAHKTFLKCG 208 (654)
T ss_dssp HHHHHHHHHHHHG--GGBGGGTSSEEEEECSSCGGG----SSCCCHHHHHHHHHHHHHHHCSSSEEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHhh--hhhccCCCCEEEEEecccccc----cccccHHHHHHHHHHHHHhcCCceeeEeecCCccccccCC
Confidence 4799999999999 999999999999999999998 4668999999999999996 9999999998642
Q ss_pred CCCccccCCCCcc---c-cc---CCCCCCCCCceeeeccCccccccCCCcCCCCHHHHHHHHHHHHHcCCceeeeeEeec
Q 005404 73 APDPVINSCNGFY---C-DA---FSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHG 145 (698)
Q Consensus 73 ~~~~v~~~~ng~~---~-~~---f~~~~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YMfhG 145 (698)
..++++.+.|... . +. +.+.+|++|+|++|||+||||+||++++.+++++++..++++|+.|+| +|||||||
T Consensus 209 ~~~g~~~t~~f~~~~~~~~~~~~~~~~~p~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-~N~YM~hG 287 (654)
T 3thd_A 209 ALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGAS-VNLYMFIG 287 (654)
T ss_dssp CBTTBEEEEECCTTSCHHHHHHHHHHHCSSSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHHHHTTCE-EEEECSBC
T ss_pred CcCCcceecccCCCccHHHHHHHHHHhCCCCCeEEeccccccCCcCCCCCCCCCHHHHHHHHHHHHhcCCc-eEEEeccc
Confidence 1122333322110 0 11 123578999999999999999999999999999999999999999998 69999999
Q ss_pred cCCCCCCCCCC--c--ccccccCCCCCCCCCCCCchhHHHHHHHHHHHHhhhccccCCCCcccCCCCcceeeeeecCCcc
Q 005404 146 GTNFGRTAGGP--F--ITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQK 221 (698)
Q Consensus 146 GTNfG~~~G~~--~--~~TSYDY~APl~E~G~~~~~ky~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~~~y~~~~~~ 221 (698)
||||||||||+ + ++|||||||||+|+|++ ||||.+||+++. .+.+......| +..++..|.
T Consensus 288 GTNfG~~~Ga~~~~~~~~TSYDYdApi~E~G~~-t~Ky~~lr~li~---~~~~~~~~~~P------~~~p~~~~~----- 352 (654)
T 3thd_A 288 GTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDL-TEKYFALRNIIQ---KFEKVPEGPIP------PSTPKFAYG----- 352 (654)
T ss_dssp CBCCTTCBCEETTTEECCSBCCTTCSBCTTCCB-CHHHHHHHHHHT---TTSCCCCSCCC------CCCCBCCCE-----
T ss_pred ccccccccCCCCCCCCccccCcCCCccccccCc-cHHHHHHHHHHH---HhcCCCCCCCC------CCCcccccC-----
Confidence 99999999986 4 79999999999999999 699999998753 33221111111 111122221
Q ss_pred eeeEeeccCCccceEEEeCCeeeecCCCceeecCCCCceeeccceeeeeeeeeecccccccccccccc---c--cccccc
Q 005404 222 CAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETY---D--EDISSL 296 (698)
Q Consensus 222 ~~~Fl~n~~~~~~~~v~~~~~~~~~p~~sv~il~~~~~~~~~t~~v~~~~~~~~~~~~~~~~~~w~~~---~--~~~~~~ 296 (698)
.|.+. ...+ .|+.+ . +|+.+.
T Consensus 353 --------------~v~l~---~~~~-------------------------------------L~~~l~~l~~~~~~~s~ 378 (654)
T 3thd_A 353 --------------KVTLE---KLKT-------------------------------------VGAALDILCPSGPIKSL 378 (654)
T ss_dssp --------------EEECE---EEEE-------------------------------------TTTTHHHHCTTCCEEES
T ss_pred --------------cEeec---cccc-------------------------------------HHHHHHhhCcCCCcccC
Confidence 11110 0011 11111 1 244443
Q ss_pred cCCCccccccchhhcCCCCCCccEEEEEEEeecCCCcccccCCCCceee--eCCcceEEEEEECCEEEEEEEccccccce
Q 005404 297 GESSTLTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLT--VESAGHAVHVFINGQFLGSAFGTRENRRF 374 (698)
Q Consensus 297 ~~~~~~~~p~~~Eql~~t~d~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~--v~~~~D~~~Vfvng~~~G~~~~~~~~~~~ 374 (698)
.|.+||+|+| .+||+||||+++....+. ..|. +.++||||+|||||+++|++++.. ..
T Consensus 379 -------~P~tmE~l~Q---~~GyvlY~t~i~~~~~~~-------~~l~l~~~~v~Dra~Vfvdg~~~G~l~r~~---~~ 438 (654)
T 3thd_A 379 -------YPLTFIQVKQ---HYGFVLYRTTLPQDCSNP-------APLSSPLNGVHDRAYVAVDGIPQGVLERNN---VI 438 (654)
T ss_dssp -------SCCBTGGGTC---CSSEEEEEEECSSCEEEE-------EEEECTTCCEESEEEEEETTEEEEEEETTT---BC
T ss_pred -------CCCCHHHhCC---CcCeEEEEeecCCCCCCC-------cceeeccCCcceEEEEEECCEEEEEEeccc---ce
Confidence 4667999988 999999999997432111 1344 688999999999999999999742 13
Q ss_pred EEeecccccCCcCeEEEEEeecCCcccccCCCccccceeecEEEccccCCCccCccCCcE-EeccCccccccccC-----
Q 005404 375 TFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWS-YQVGLKGEAMNLVS----- 448 (698)
Q Consensus 375 ~~~~~~~l~~g~~~L~ILven~Gr~N~g~~~~~~~kGI~g~V~l~g~~~~~~~l~~~~W~-~~~~l~~e~~~~~~----- 448 (698)
++ ++..+.+ ++|+||||||||||||+.| +++|||+|+|+|++. .|+ +|+ |.++|+........
T Consensus 439 ~l--~~~~~~~-~~L~ILVEN~GRvNyG~~i-~d~KGi~g~V~l~~~-----~l~--~W~~~~L~~~~~~~~~~~~~~~~ 507 (654)
T 3thd_A 439 TL--NITGKAG-ATLDLLVENMGRVNYGAYI-NDFKGLVSNLTLSSN-----ILT--DWTIFPLDTEDAVRSHLGGWGHR 507 (654)
T ss_dssp EE--EEEECTT-CEEEEEEECCCCBCSSGGG-CCCCEECSCCEETTE-----ECC--CEEEEECCHHHHHHTTTTTTCCC
T ss_pred eE--eccCCCC-CEEEEEEEcCCccccCCCC-CCCCCCCCceEECCE-----EcC--CcEEEeeccchhhhhhhcccccc
Confidence 33 3333333 6899999999999999988 689999999999987 466 899 66666532211000
Q ss_pred CCCCCCCcccCCCccccccCCceEEEEEEeCCCCC----CCeEEEeCCCceEEEEECCeeeeeeeeccccCCCCccccCC
Q 005404 449 PSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGN----EPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAG 524 (698)
Q Consensus 449 ~~~~~~~~w~~~~~~~~~~~~~~~Yr~~F~~p~~~----d~~~Ld~~g~gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G 524 (698)
........|.... .. ..+|+||+++|+++... .+|||||+|||||+||||||||||||+++ |
T Consensus 508 ~~~~~~~~~~~~~--~~-~~~P~fy~g~f~i~~~~~~~p~DTFLd~~gWgKGvV~VNG~NLGRYW~~~-----------G 573 (654)
T 3thd_A 508 DSGHHDEAWAHNS--SN-YTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPAR-----------G 573 (654)
T ss_dssp ----------------C-CCCCEEEEEEECCCSSCTTCSCBEEEECTTCCSEEEEETTEEEEEECTTT-----------C
T ss_pred ccccccccccccc--cC-CCCCEEEEEEEEccCCCCCCCCCEEEeCCCCCeEEEEECCcccccccCCC-----------C
Confidence 0000001122211 11 34689999999997531 24999999999999999999999999754 6
Q ss_pred CcCCccccCCCCCCceeeEecCcccccCC-cceEEEEEeeCCCC-------cceEEEeecc
Q 005404 525 TFRPINCQRRCGHPTQRWYHVPRSWLKPT-KNLLVVFEELGGDA-------SRISLVKRSV 577 (698)
Q Consensus 525 ~~~~~~~~~~~~~PQqtlY~vP~~~Lk~g-~N~ivvfE~~g~~~-------~~i~~~~~~~ 577 (698)
|||||| ||++|||+| +|+|||||+++... ..|+|.++++
T Consensus 574 -------------PQ~TLY-vP~p~Lk~G~~NeIiVfEle~~~~~~~~~~~~~i~~~~~P~ 620 (654)
T 3thd_A 574 -------------PQLTLF-VPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPV 620 (654)
T ss_dssp -------------SCCCEE-ECGGGCCSSSCEEEEEEESSCCSCSSSCGGGSEEEEESSCC
T ss_pred -------------CeEEEE-ecHHHhCCCCCceEEEEEeecCCccccccccceEEeecccc
Confidence 999999 999999998 99999999997543 4699988863
No 3
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.3e-94 Score=827.21 Aligned_cols=449 Identities=27% Similarity=0.472 Sum_probs=348.5
Q ss_pred ChhHHHHHHHHHhccCceeccCCcEEEEEeccccCCccccCCCCcHHHHHHHHHHHHhCCC-CcceEeecCC-----CCC
Q 005404 1 MQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDT-GVPWVMCKED-----DAP 74 (698)
Q Consensus 1 ~~~~~~~i~~~l~~~~l~~~~GGPII~vQvENEYG~~~~~~g~~d~~Ym~~L~~~a~~~Gi-~vp~~~~~~~-----~~~ 74 (698)
|++|+++|+++++ ++|++|+|||||+|||||||++ + .+++|++++++++++.|+ +||+++|+.. ...
T Consensus 132 ~~~~~~~l~~r~~--~~~~~n~p~II~wqIeNEyg~y----g-~~~~y~~~l~~~l~~~g~~~vp~~~~~~~~~~~~~~~ 204 (612)
T 3d3a_A 132 VKLFLNEVGKQLA--DLQISKGGNIIMVQVENEYGAF----G-IDKPYISEIRDMVKQAGFTGVPLFQCDWNSNFENNAL 204 (612)
T ss_dssp HHHHHHHHHHHHG--GGBGGGTSSEEEEECSSCGGGT----C-CCHHHHHHHHHHHHHHTCCSSCEEEEECTTTGGGTCC
T ss_pred HHHHHHHHHHHHh--hhhhccCCCEEEEeeccccccc----C-chHHHHHHHHHHHHHcCCCchhheecccccccccCCC
Confidence 4689999999999 9999999999999999999974 5 589999999999999997 9999999863 123
Q ss_pred CccccCCCCcc-----cccCC---CCCCCCCceeeeccCccccccCCCcCCCCHHHHHHHHHHHHHcCCceeeeeEeecc
Q 005404 75 DPVINSCNGFY-----CDAFS---PNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGG 146 (698)
Q Consensus 75 ~~v~~~~ng~~-----~~~f~---~~~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YMfhGG 146 (698)
++++.++| +. ++.|. +.+|++|+|++|||+|||++||++++.+++++++.+++++|++|+| +||||||||
T Consensus 205 ~~~~~t~n-f~s~~~~~~~~~~~~~~~p~~P~~~~E~~~Gwf~~wg~~~~~~~~~~~~~~~~~~l~~g~s-~n~YM~hGG 282 (612)
T 3d3a_A 205 DDLLWTIN-FGTGANIDEQFKRLKELRPDTPLMCSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNIS-FSLYMTHGG 282 (612)
T ss_dssp TTSEEEEE-EETTCCHHHHHHHHHHHCTTSCCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHTTTCE-EEEECSBCC
T ss_pred CCcccccc-cCCCccHHHHHHHHHHhccCCCceeeccccCccccccCCCccCCHHHHHHHHHHHHHcCCc-eEeeeeecc
Confidence 34555555 22 12222 5689999999999999999999999999999999999999999999 599999999
Q ss_pred CCCCCCCCC--C-c--ccccccCCCCCCCCCCCCchhHHHHHHHHHHHHhhhccccCCCCcccCCCCcceeeeeecCCcc
Q 005404 147 TNFGRTAGG--P-F--ITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQK 221 (698)
Q Consensus 147 TNfG~~~G~--~-~--~~TSYDY~APl~E~G~~~~~ky~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~~~y~~~~~~ 221 (698)
||||+|+|+ + + ++|||||||||+|+|++ ||||.+||+++.. + ++...+.+ +.+.+.+.
T Consensus 283 TNfG~~~ga~~~~~~~~~tSYDy~Apl~E~g~~-~~ky~~lr~~~~~---~---~~~~~~~~-~~p~~~~~--------- 345 (612)
T 3d3a_A 283 TSFGHWGGANFPNFSPTCTSYDYDAPINESGKV-TPKYLEVRNLLGN---Y---LPEGETLP-EIPDSIPT--------- 345 (612)
T ss_dssp BCCTTCBCEETTTTEEBCSBCCTTCSBCTTSCC-CHHHHHHHHHHTT---S---SCTTCCCC-CCCCCCCB---------
T ss_pred cCCCcccccCCCCccceeeeeccCCccCcCCCc-cHHHHHHHHHHHH---h---cccCCCcC-CCCCCCcc---------
Confidence 999999987 3 4 79999999999999999 7999999998642 2 11111111 00111111
Q ss_pred eeeEeeccCCccceEEEeCCeeeecCCCceeecCCCCceeeccceeeeeeeeeeccccccccccccccccccccccCCCc
Q 005404 222 CAAFLSNYNTKSAARVTFNGRQYNLPPWSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESST 301 (698)
Q Consensus 222 ~~~Fl~n~~~~~~~~v~~~~~~~~~p~~sv~il~~~~~~~~~t~~v~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 301 (698)
+.+|+|++ .++ ...|+.+.+|+.+.
T Consensus 346 ----------------------~~~~~~~~----------~~~------------------~~l~~~~~~~~~~~----- 370 (612)
T 3d3a_A 346 ----------------------IAIPTIKM----------TEM------------------AVLFDNLPHPKESE----- 370 (612)
T ss_dssp ----------------------CCEEEEEC----------CEE------------------EEGGGGCCCCEEES-----
T ss_pred ----------------------cccccEEE----------eee------------------eeHHHhCCCcccCC-----
Confidence 11222211 011 11355555665543
Q ss_pred cccccchhhcCCCCCCccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeeccc
Q 005404 302 LTAIGLLEQINITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPAN 381 (698)
Q Consensus 302 ~~~p~~~Eql~~t~d~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~ 381 (698)
.|.+||||+| .+||+||||+|+.... ...|++.+++|+|+|||||+++|++++..... .+.+ +
T Consensus 371 --~p~~~E~l~q---~~gy~lY~t~i~~~~~--------~~~L~i~~~~D~a~Vfvng~~~G~~~~~~~~~--~~~~--~ 433 (612)
T 3d3a_A 371 --DIRTMEAFDQ---GWGSILYRTSLSASDK--------EQTLLITEAHDWAQVFLNGKKLATLSRLKGEG--VVKL--P 433 (612)
T ss_dssp --SCCBGGGGTC---CSSEEEEEEEECCBSS--------CEEEEEEEEESEEEEEETTEEEEEEETTTTCC--EEEE--C
T ss_pred --CCCCHHHhCC---CCCeEEEEEEecCCCC--------CceEEecCCCeEEEEEECCEEEEEEEcccCCc--eEEe--e
Confidence 3678999999 6799999999976322 24799999999999999999999998754333 3332 3
Q ss_pred ccCCcCeEEEEEeecCCcccccCCCccccceeecEEEccccCCCccCccCCcE-EeccCccccccccCCCCCCCCcccCC
Q 005404 382 LRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWS-YQVGLKGEAMNLVSPSEATSVDWTRG 460 (698)
Q Consensus 382 l~~g~~~L~ILven~Gr~N~g~~~~~~~kGI~g~V~l~g~~~~~~~l~~~~W~-~~~~l~~e~~~~~~~~~~~~~~w~~~ 460 (698)
+.++.++|+||||||||+|||+.| +++|||+|+|+|++ ..++.+|+ +|+ |+++|++|.. ..++|...
T Consensus 434 ~~~~~~~L~iLven~Gr~NyG~~~-~~~kGi~g~V~l~~-~~~~~~l~--~W~~y~l~l~~~~~--------~~~~~~~~ 501 (612)
T 3d3a_A 434 PLKEGDRLDILVEAMGRMNFGKGI-YDWKGITEKVELQS-DKGVELVK--DWQVYTIPVDYSFA--------RDKQYKQQ 501 (612)
T ss_dssp CBCTTEEEEEEEECCCCCCSGGGG-CCCCEEEEEEEEEE-TTEEEECC--CEEEEEECCCHHHH--------HSSCCBC-
T ss_pred cCCCCcEEEEEEEecCCCccCccc-cCCCCCCcceEEcC-CcCceecc--CceEEEeccCcccc--------cccccccc
Confidence 445678999999999999999998 79999999999988 22334676 899 7999987621 13456443
Q ss_pred CccccccCCceEEEEEEeCCCCCCCeEEEeCCCceEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCce
Q 005404 461 SLAAQGQQSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQ 540 (698)
Q Consensus 461 ~~~~~~~~~~~~Yr~~F~~p~~~d~~~Ld~~g~gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQq 540 (698)
... ..+|+|||++|++|++.| |||||+|||||+||||||||||||+ +| |||
T Consensus 502 ~~~---~~~p~~yk~~f~~~~~~D-t~Ld~~g~gKG~vwVNG~nlGRYW~------------~G-------------Pqq 552 (612)
T 3d3a_A 502 ENA---ENQPAYYRSTFNLNELGD-TFLNMMNWSKGMVWVNGHAIGRYWE------------IG-------------PQQ 552 (612)
T ss_dssp -------CCCEEEEEEEEESSCCB-EEEECTTCCEEEEEETTEEEEEEET------------TC-------------SCC
T ss_pred CCC---CCCCEEEEEEEECCCCCc-EEEecCCCCcEEEEECCEeEEeEEe------------cC-------------CEE
Confidence 211 236899999999998877 9999999999999999999999993 46 999
Q ss_pred eeEecCcccccCCcceEEEEEeeCCCCcceEEEeec-ccccccccccCCC
Q 005404 541 RWYHVPRSWLKPTKNLLVVFEELGGDASRISLVKRS-VARVCADAHEHHP 589 (698)
Q Consensus 541 tlY~vP~~~Lk~g~N~ivvfE~~g~~~~~i~~~~~~-~~~~~~~~~e~hp 589 (698)
||| ||++|||+|+|+||||||++..+..|+|.+.+ .+.+-...++.|+
T Consensus 553 tlY-vP~~~Lk~g~N~ivvfE~~~~~~~~i~~~~~p~~~~~~~~~~~~~~ 601 (612)
T 3d3a_A 553 TLY-VPGCWLKKGENEIIILDMAGPSKAETEGLRQPILDVQRGNGAYAHR 601 (612)
T ss_dssp EEE-ECGGGCCSEEEEEEEEESSCCSSSEEEEESSCCCSCCCSSCSSCGG
T ss_pred EEE-ecHHHcCCCCcEEEEEEEcCCCCceEEeecccccCCCccccccccc
Confidence 999 99999999999999999999888899999886 4444444445553
No 4
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=100.00 E-value=4.5e-77 Score=708.89 Aligned_cols=533 Identities=25% Similarity=0.364 Sum_probs=386.7
Q ss_pred ChhHHHHHHHHHhccCceeccCCcEEEEEeccccCCcc-ccCCCCcHHHHHHHHHHHHhCCCCcceEeecCCC----CCC
Q 005404 1 MQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPES-KSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDD----APD 75 (698)
Q Consensus 1 ~~~~~~~i~~~l~~~~l~~~~GGPII~vQvENEYG~~~-~~~g~~d~~Ym~~L~~~a~~~Gi~vp~~~~~~~~----~~~ 75 (698)
|++|+++|+++++ ++|+++||||||+|||||||++. +.++..+++||++|++++|++|++||++||++.. .+.
T Consensus 130 ~~~~~~~l~~~~~--~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~~~~~~~~~~~ 207 (971)
T 1tg7_A 130 TDNYASNIAATIA--KAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPG 207 (971)
T ss_dssp HHHHHHHHHHHHH--HTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTT
T ss_pred HHHHHHHHHHHHh--hhhhcCCCCEEEEecccccCcccccccchhHHHHHHHHHHHHHHhCCCeeEEEecCccccccccc
Confidence 5799999999999 99999999999999999999853 2333469999999999999999999999999741 221
Q ss_pred ccccCCC---------Ccccc--------cCC--------CCCCCCCceeeeccCccccccCCCcCCCCHHHH----HHH
Q 005404 76 PVINSCN---------GFYCD--------AFS--------PNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDL----AFA 126 (698)
Q Consensus 76 ~v~~~~n---------g~~~~--------~f~--------~~~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~----~~~ 126 (698)
.+...++ +++|. .|. ..+|++|+|+||||+|||++||+.++.+++++. +..
T Consensus 208 ~~~g~ldv~~~D~Yp~g~~~~~~~~~~~~~~~~~~~d~~r~~~p~~P~~~~E~~~Gw~~~Wg~~~~~~~~~~~~~~~~~~ 287 (971)
T 1tg7_A 208 TGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERV 287 (971)
T ss_dssp SCTTCCSBCEEEECTTCSCCSCTTCCCTTCSCCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHH
T ss_pred cccCceeEEecCCCccccccCCcccccccccchhHHHHhhccCCCCCEEEEecCCcCccCCCCCccccccccChHHHHHH
Confidence 1111111 22331 111 246789999999999999999997665544433 332
Q ss_pred H-HHHHHcCCceeeeeEeeccCCCCCCCCCCcccccccCCCCCCCCCCCCc-hhHHHHHHHHHHHHhhhccccCCCCccc
Q 005404 127 V-ARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQ-PKYGHLKQLHEAIKLCEYALVSSDPTVT 204 (698)
Q Consensus 127 ~-~~~l~~g~s~~n~YMfhGGTNfG~~~G~~~~~TSYDY~APl~E~G~~~~-~ky~~lr~l~~~~~~~~~~l~~~~p~~~ 204 (698)
+ ..+|++|++.+||||||||||||+++| +..+|||||+|||+|+|++ + +||.++|+|+++|+.+++. +.++|...
T Consensus 288 ~~~~~la~Ga~~vnyYm~~GGTNfG~~~g-~~~~tSYDy~Apl~E~G~~-t~~ky~elr~l~~~l~~~~~~-l~~~~~~~ 364 (971)
T 1tg7_A 288 FYKNDFSFGVAFLNLYMIFGGTNWGNLGH-PGGYTSYDYGSAISESRNI-TREKYSELKLLGNFAKVSPGY-LVANPGDL 364 (971)
T ss_dssp HHHHHHTTTCSEEEEECSBCCBCCTTCBC-TTSCSBCCTTCSBCTTCCC-CSHHHHHHHHHHHHHHTCHHH-HTSEECCC
T ss_pred HHHHHHHCCCCEEEEEEeecccCCcccCC-CCcceeeccCceeCcCCCc-chhHHHHHHHHHHHHHhChHh-hccCCccC
Confidence 2 477899999899999999999999954 5688999999999999999 6 9999999999999988663 33333211
Q ss_pred C---CCCcceeeeee--c--CCccee------------------------------------------------------
Q 005404 205 S---LGTYQQAHVFS--A--GQQKCA------------------------------------------------------ 223 (698)
Q Consensus 205 ~---~~~~~~~~~y~--~--~~~~~~------------------------------------------------------ 223 (698)
. .+.+....++. . ..++.|
T Consensus 365 ~~~~~~~~~~~~~~~l~~~~~~~a~f~~~r~~~~~~~~~~~~~l~v~ts~g~~~iP~~~g~i~l~gr~ski~~~d~~~g~ 444 (971)
T 1tg7_A 365 STSTYTNTADLTVTPLLGSNSSASSFFVIRHSDYSSQASVEYKLTVPTSAGNLTIPQLGGSLTLSGRDSKIHVTDYDVAG 444 (971)
T ss_dssp BSSSSBSCTTEEEEEEECSSTTSCEEEEEEESSTTCCCCEEECEEEEETTEEEEECSSSSCEEECTTCCEEEEEEEEETT
T ss_pred ccccccCCCceEEEEeecCCCCceEEEEEeccCCCCCCceEEEEEEecCCCCEeccCCCCceEECCCceEEEecccccCC
Confidence 1 01111111111 0 111112
Q ss_pred -----------------------------------------------------------eEeeccCCccceE-EEeCCe-
Q 005404 224 -----------------------------------------------------------AFLSNYNTKSAAR-VTFNGR- 242 (698)
Q Consensus 224 -----------------------------------------------------------~Fl~n~~~~~~~~-v~~~~~- 242 (698)
.|+.|+......+ |++++.
T Consensus 445 ~~l~ysTa~~~t~~~~~~~~v~vly~~~g~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 524 (971)
T 1tg7_A 445 TNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHEFAVSGASSSSVVEGSSSGISSKKVGKALVVAWDVSTARRIVQVGSLK 524 (971)
T ss_dssp EEEEEESSEEEEEEEETTEEEEEEEECTTCEEEEEEETCCCCEEEESCCTTCEEEEETTEEEEEEECCSSCEEEEETTEE
T ss_pred eEEEEeeeeeEEEEEECCceEEEEEcCCCCceEEEEecCcceeeecCcccceeEeccCceEEEeeccCCceEEEEECCEE
Confidence 2222222111112 455433
Q ss_pred ----------eeecCC----------------------------Cceee-------------------c--C-CCCceee
Q 005404 243 ----------QYNLPP----------------------------WSISI-------------------L--P-DCKNVVF 262 (698)
Q Consensus 243 ----------~~~~p~----------------------------~sv~i-------------------l--~-~~~~~~~ 262 (698)
.+-+|+ ||++| + | +|+.+.|
T Consensus 525 v~lld~~~A~~~w~p~~~~~~~~~~~~~~~~~~~~v~v~g~ylvrsasi~~~~l~l~gd~~~~t~~ev~~~p~~~~~v~~ 604 (971)
T 1tg7_A 525 VFLLDRNSAYNYWVPQVPTKGTAPGYSNQETTASSIIVKAGYLVRSAYLDGNDLHIQADFNATTPIEVVGAPSGAKNLVI 604 (971)
T ss_dssp EEEEEHHHHTTEECCCCCSSSSCCCCCSHHHHHTCCEEECSSEEEEEEEETTEEEEEEEBSSCEEEEEESCCTTCCEEEE
T ss_pred EEEechHhhheEecccccCccccCcccccccCCceEEEecCcEEEEEEEeCCEEEEEeecCCCceEEEEecCCCccEEEE
Confidence 344444 77887 6 5 8999999
Q ss_pred ccceeeeeeee---ee-ccc----cc----ccccccccccc---ccccccCCCccccccchhhcCC----C----CCCcc
Q 005404 263 NTAKVAVQHTK---MQ-MLP----TG----SKLLSWETYDE---DISSLGESSTLTAIGLLEQINI----T----RDTSD 319 (698)
Q Consensus 263 ~t~~v~~~~~~---~~-~~~----~~----~~~~~w~~~~~---~~~~~~~~~~~~~p~~~Eql~~----t----~d~~G 319 (698)
|+++|..+++. +. +.+ .. ...+.|+...+ ..+.. .+...+.....|+.++ | .+.++
T Consensus 605 Ng~~v~~~~~~~g~~~~~~~~~~~~~~~P~l~~l~Wk~~~~~pe~~~~~-dDs~W~~~~l~~~~n~~~p~t~p~~~~~sd 683 (971)
T 1tg7_A 605 NGKKTQTKVDKNGIWSASVAYTAPKVQLPSLKSLKWKSVDTLPEAKNTY-DDSAWTSADHAYTNNSAHSLQTPTSLFASD 683 (971)
T ss_dssp TTEEECCEECTTCCEEEEECCCCCCCCCCCGGGSCCEEEESCGGGSTTC-CCTTSEECCCSSCCCTTCCCSSSSCCBGGG
T ss_pred CCEEceeEEccCccEEEecCCCcccccccccCCCCeEEeCCCccccCCC-CCCCceECCCcccccccCCCCCCccCCCCc
Confidence 99999876654 22 111 11 12236886655 22221 1222333445566655 4 34444
Q ss_pred E------EEEEEEeecCCCcccccCCCCceeeeC---CcceEEEEEECCEEEEEEEcccc--ccceEEeecccccC-CcC
Q 005404 320 Y------LWYMTSVEISSSESFLRGGQKPTLTVE---SAGHAVHVFINGQFLGSAFGTRE--NRRFTFSGPANLRA-GIN 387 (698)
Q Consensus 320 y------~~Y~t~i~~~~~~~~l~~g~~~~L~v~---~~~D~~~Vfvng~~~G~~~~~~~--~~~~~~~~~~~l~~-g~~ 387 (698)
| +|||++|++++++ ..|.+. ++++.++|||||+++|+..+... ..++.+++ ..|+. ++|
T Consensus 684 YGf~~G~lwYR~~F~~~~~~--------~~L~~~~~gG~~~~~~VwvNG~~lGs~~g~~~~~~~~~~~~l-~~L~~gg~N 754 (971)
T 1tg7_A 684 YGYHTGALLFRGHFTANGKE--------KTFFVQTKGGTAYGHSIWINETYVGSWAGTSINDNNNATYTL-PTLQSGKNY 754 (971)
T ss_dssp GTCCSSCEEEEEEEECCSCC--------CEEEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEC-CCCCTTCEE
T ss_pred cCccCceEEEEEEEECCCcc--------eEEEEEecCcccceEEEEECCEEEeeeecCCCcccCceEEEE-eEecCCCce
Confidence 5 9999999976543 478887 99999999999999999886542 11355555 46777 579
Q ss_pred eEEEEEeecCCccc---ccCCCccccceeecEEEccccCCC--ccCccCCc--EE---------eccCccccccccCCCC
Q 005404 388 KIALLSIAVGLPNV---GLHYETWETGVRGAVVLHGLDHGN--KDLTWQKW--SY---------QVGLKGEAMNLVSPSE 451 (698)
Q Consensus 388 ~L~ILven~Gr~N~---g~~~~~~~kGI~g~V~l~g~~~~~--~~l~~~~W--~~---------~~~l~~e~~~~~~~~~ 451 (698)
+|+|||+|||+.|+ |..++++++||. +|.|.+.+.+. ++|+++.| .| +.||.+|++++|+| +
T Consensus 755 vI~Vlvdn~G~~nsWy~G~~~~~~~~GI~-~v~L~g~~~~~~~w~l~g~~~ge~~~D~~RgplN~~GL~gE~~~w~~p-~ 832 (971)
T 1tg7_A 755 VITVVIDNMGLDEDWTIGSEDMKNPRGII-QYSLSGQEASAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQP-Q 832 (971)
T ss_dssp EEEEEECCCCCCCCCSBTCCGGGCCCEEE-EEEETTSCGGGCEEEEESSTTTTSCSCTTTCSSSCCSSHHHHTTTTSS-S
T ss_pred EEEEEEecCCCCcccccCccccccCCcce-EEEEeccCCCCceEEEeeccccccccccccccccccccccccccccCC-C
Confidence 99999999999999 988889999999 89998865444 67777788 67 78999999999999 4
Q ss_pred CCCCcccCCCcccc-ccCCceEEEEEEe--CCCCCC-CeEEEeCCCc------eEEEEECCeeeeeeeeccccCCCCccc
Q 005404 452 ATSVDWTRGSLAAQ-GQQSLKWYKAYFD--APTGNE-PLALDLRSMG------KGQVWINGQSIGRYWMAYAKGDCKTCS 521 (698)
Q Consensus 452 ~~~~~w~~~~~~~~-~~~~~~~Yr~~F~--~p~~~d-~~~Ld~~g~g------KG~vwVNG~nlGRYW~~~~~g~~~~~~ 521 (698)
.+..+|.+.+..+. ...+++|||++|+ +|++.| |+.|||..|+ ||++||||++|||||+.+
T Consensus 833 ~~~~~W~~~sp~~gl~~~Gv~wyr~~f~L~~p~g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~--------- 903 (971)
T 1tg7_A 833 PPTQKWDSSSPFTGLTKPGIRFYSTSFDLDLPSGYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNI--------- 903 (971)
T ss_dssp CCCTTSBCCCTTTCBSSSEEEEEEEEEECCCCTTEECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETTT---------
T ss_pred CCcccccCCCCcCCCCCCceEEEEEEEeccCCCCCCceEEEEcCCCCCCCccceEEEEECCEEEeeecCCC---------
Confidence 77789987643221 1345899999999 666656 8999999999 999999999999999754
Q ss_pred cCCCcCCccccCCCCCCceeeEecCcccc-cCCcceEEE----EEeeCCCCcceEEEee
Q 005404 522 YAGTFRPINCQRRCGHPTQRWYHVPRSWL-KPTKNLLVV----FEELGGDASRISLVKR 575 (698)
Q Consensus 522 ~~G~~~~~~~~~~~~~PQqtlY~vP~~~L-k~g~N~ivv----fE~~g~~~~~i~~~~~ 575 (698)
| || |.||||+.|| |+|+|+|+| ||+.|+++..|.|.+.
T Consensus 904 --~-------------pq-r~y~VP~giLn~~G~N~i~vrv~~~~~~Gg~~~~i~l~~~ 946 (971)
T 1tg7_A 904 --G-------------PQ-TSFPVPEGILNYHGTNWLALSLWAQEDNGAKLDSFELINT 946 (971)
T ss_dssp --C-------------SC-CEEEECBTTBCTTSEEEEEEEEEECSTTCBCCSCEEEEEC
T ss_pred --C-------------CC-EEEECCHHHhCcCCccEEEEEEecCCCCCCCccceEEEEc
Confidence 4 77 5677999999 899999999 9999999999999888
No 5
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=100.00 E-value=1.6e-70 Score=642.40 Aligned_cols=530 Identities=22% Similarity=0.309 Sum_probs=348.2
Q ss_pred ChhHHHHHHHHHhccCceeccCCcEEEEEeccccCCccccCCCCcHHHHHHHHHHHHhCCCCcceEeecCCC----CCCc
Q 005404 1 MQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDD----APDP 76 (698)
Q Consensus 1 ~~~~~~~i~~~l~~~~l~~~~GGPII~vQvENEYG~~~~~~g~~d~~Ym~~L~~~a~~~Gi~vp~~~~~~~~----~~~~ 76 (698)
|++|+++|+++++ ++|+++||||||+|||||||++...++.+|++||+||+++||++||+||||||++.. +++.
T Consensus 150 ~~~~~~~l~~~~~--~~~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t~d~~~~~~~~~g~ 227 (1003)
T 3og2_A 150 TDNYVAHIASIIA--KAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINNDAFPGGTGAPGT 227 (1003)
T ss_dssp HHHHHHHHHHHHH--HTBGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBCCBSSSCCTTCTTS
T ss_pred HHHHHHHHHHHHH--HhhccCCCCEEEEEcccccCcccccccCCCHHHHHHHHHHHHHcCCceEEEEcCCccccccCCCc
Confidence 5799999999999 999999999999999999999866666679999999999999999999999999852 3322
Q ss_pred cccC---------CCCccccc----------------CCCCCCCCCceeeeccCccccccCCCcCCCCHHHHHHHH----
Q 005404 77 VINS---------CNGFYCDA----------------FSPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAV---- 127 (698)
Q Consensus 77 v~~~---------~ng~~~~~----------------f~~~~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~---- 127 (698)
++.+ +++++|.+ +.+.+|++|+|++|||+||||+||++++.+++++++.++
T Consensus 228 ~~g~vdiyg~d~yp~g~~c~~~~~w~~~~~~~~~~~~~~~~~p~~P~~~~Ef~~GWfd~WG~~~~~~~~~~~~~~~~~~~ 307 (1003)
T 3og2_A 228 GLGSVDIYGHDGYPLGFDCAHPSAWPDNGLPTTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVF 307 (1003)
T ss_dssp CTTCCSBCEEEECTTCSCTTSTTCCCTTCSCCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHSSHHHHHHH
T ss_pred cccceeeeccccccCcccccCCcccccccchHHHHHHhhhcCCCCCeEEEeeccccccccCCCCCCCChhhhhHHHHHHH
Confidence 2222 23444521 113579999999999999999999998777776655544
Q ss_pred -HHHHHcCCceeeeeEeeccCCCCCCCCCCcccccccCCCCCCCCCCCCchhHHHHHHHHHHHHhhhccccCCCCcccC-
Q 005404 128 -ARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTS- 205 (698)
Q Consensus 128 -~~~l~~g~s~~n~YMfhGGTNfG~~~G~~~~~TSYDY~APl~E~G~~~~~ky~~lr~l~~~~~~~~~~l~~~~p~~~~- 205 (698)
+++|++|+|++||||||||||||+|+ ++..+|||||||||+|+|+++||||.+||.++.|++.+.. ++.++|...+
T Consensus 308 ~~~~l~~G~s~vN~YM~hGGTNFG~~~-~~~~~TSYDYdAPL~E~G~~~t~Ky~~lK~l~~fl~~~~~-~l~~~~~~~~~ 385 (1003)
T 3og2_A 308 YKNNMAAGVTIFNIYMTFGGTNWGNLG-HPGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVSPG-YITATPENATQ 385 (1003)
T ss_dssp HHHHHHTTCSEEEEEEEECCBCCTTCB-CTTSCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTCTH-HHHSEECCCBS
T ss_pred HHHHHhcCCceEEEEEeccccCccccC-CCCccccccCCCcccccCCcCchHHHHHHHHHHHHhcChH-hhccccccCCC
Confidence 56788999989999999999999995 5678999999999999999977999999999999986543 3333333221
Q ss_pred --CCCcceeeeee--cCCcceeeEeeccC--Ccc--ceEEEeC--CeeeecCC---------CceeecC-----CCCcee
Q 005404 206 --LGTYQQAHVFS--AGQQKCAAFLSNYN--TKS--AARVTFN--GRQYNLPP---------WSISILP-----DCKNVV 261 (698)
Q Consensus 206 --~~~~~~~~~y~--~~~~~~~~Fl~n~~--~~~--~~~v~~~--~~~~~~p~---------~sv~il~-----~~~~~~ 261 (698)
...+....++. ...++.|.|+.+.+ .+. ..+++++ ...+++|. ....|++ ....++
T Consensus 386 ~~~~~~~~i~~t~lr~~~~~~Fyvvrh~~~~s~~~~~~~l~l~ts~G~~tiP~~~g~ltL~grdskI~vtdy~~g~~~L~ 465 (1003)
T 3og2_A 386 GVYSDSQNIVITPLLAKESGDFFVVRHANYSSTDTASYTVKLPTSAGDLTIPQLGGSLTLTGRDSKIHVTDYPVGKFTLL 465 (1003)
T ss_dssp SSSSSCSSEEEEEEECSSSCEEEEEEESSTTCCSCEEECEEECCTTCCEEECTTSCCEEECTTCEEEEEEEEEETTEEEE
T ss_pred ccccCCCceEEEEEecCCCceEEEEEccCCCCCCcceEEEEecCCCCcEEeCCCCCeEEECCccceEEeeccccCCeEEE
Confidence 11222333333 33456777773322 111 1112221 11122221 1100000 000011
Q ss_pred ecccee----------------------------------------------------------ee-ee-----------
Q 005404 262 FNTAKV----------------------------------------------------------AV-QH----------- 271 (698)
Q Consensus 262 ~~t~~v----------------------------------------------------------~~-~~----------- 271 (698)
|.|+++ +- +.
T Consensus 466 YSTAevlT~~~~~~~~vlvlyg~~Ge~~E~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~l 545 (1003)
T 3og2_A 466 YSTAEIFTWNEFAEKTVLVLYGGAQELHEFAVKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTASSARQVVQLGSL 545 (1003)
T ss_dssp EESSEEEEEEECSSCEEEEEEECTTCEEEEEESCCSTTCSSCCCEEEECSSCEEEECTTCCEEEEEECCSSCEEEEETTE
T ss_pred EEccceEEEEEECCEEEEEEECCCCCceEEEEecccccccCCCCceecCCCeeEEecCCcEEEEEEecCCceEEEEECCE
Confidence 111100 00 00
Q ss_pred -----------------------------------e-------e-ee----------------------c-ccccc----
Q 005404 272 -----------------------------------T-------K-MQ----------------------M-LPTGS---- 281 (698)
Q Consensus 272 -----------------------------------~-------~-~~----------------------~-~~~~~---- 281 (698)
. . |+ + .|...
T Consensus 546 ~v~l~dr~~A~~~W~~~~~~~~~~~~~~~~~~~~~~vlV~g~yLvRsA~~~g~~l~l~GD~~~tt~lev~~~p~~v~~v~ 625 (1003)
T 3og2_A 546 VIYMVDRNSAYNYWVPTLPGSGKQSAYGSSLMNPDSVIINGGYLIRSVAIKGNALSVQADFNVTTPLEIIGIPKGISKLA 625 (1003)
T ss_dssp EEEEEEHHHHTTEECCBCCCSSTTGGGCSCSSSCCBCEEECCSEEEEEEEETTEEEEEEEBSSCCCEEEESCCTTCCEEE
T ss_pred EEEEEehHHHhhhccccccCCCccccccccCCCCCcEEEECCeEEEEEEEcCCEEEEEeecCCCceEEEEecCCCccEEE
Confidence 0 0 00 0 00000
Q ss_pred ------------------------------c--ccccccc---ccccc-----ccc---CC------Cccccc--cchhh
Q 005404 282 ------------------------------K--LLSWETY---DEDIS-----SLG---ES------STLTAI--GLLEQ 310 (698)
Q Consensus 282 ------------------------------~--~~~w~~~---~~~~~-----~~~---~~------~~~~~p--~~~Eq 310 (698)
. .+.|... +|-.+ .|. .. .|+..| ....+
T Consensus 626 wNG~~~~~~~~~~g~~~~~~~~~~~~i~lP~L~~l~Wk~~dslPE~~~~ydDs~W~~A~~~~t~n~~~p~~~p~~Lya~d 705 (1003)
T 3og2_A 626 VNGKELGYSVSELGDWIAHPAIEIPHVQVPELTKLKWYKVDSLPEIRSNYDDSRWPLANLRTSNNTYAPLKTPVSLYGSD 705 (1003)
T ss_dssp ETTEEECCEECTTSCEEECCCCCCCCCCCCCGGGSCCEEEESCGGGSTTCCCTTSCBCCCSCCCCSSSCCCSSSCCBGGG
T ss_pred ECCEEceeEecCCCcEEEEecCCCCcccCCCCCCCCeeecCCCcccCCCCCcccceecCcccccCcccCCCCCcEeEccc
Confidence 0 0123311 11100 000 00 001111 12334
Q ss_pred cCCCCCCccEEEEEEEeecCCCcccccCCCCceeeeCC-cceEEEEEECCEEEEEEEccccc--cceEEeecccccCC-c
Q 005404 311 INITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVES-AGHAVHVFINGQFLGSAFGTREN--RRFTFSGPANLRAG-I 386 (698)
Q Consensus 311 l~~t~d~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~-~~D~~~Vfvng~~~G~~~~~~~~--~~~~~~~~~~l~~g-~ 386 (698)
.|. ++|.+|||.+|++++.+ +...|.+.+ .+..+.|||||+++|+..+.... .++++++|. |+.| +
T Consensus 706 YGf---h~G~~wYRG~F~a~~~~------~~v~L~~~GG~af~~sVWLNG~flGs~~g~g~~~~~~~~~~lP~-L~~g~~ 775 (1003)
T 3og2_A 706 YGF---HAGTLLFRGRFTARTAR------QQLFLSTQGGSAFASSVWLNDRFIGSFTGFDAASAANSSYTLDR-LVRGRR 775 (1003)
T ss_dssp GTC---CSSCEEEEEEEECSSSS------EEEEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEECS-CCTTCE
T ss_pred cCc---ccCCEEEeeEEECCCCc------eEEEEEEccccccccEEEECCEEeccccCCCcccccceEEECCc-ccCCCc
Confidence 444 67999999999987543 134666655 67799999999999998754321 246666663 6655 7
Q ss_pred CeEEEEEeecCCc-ccccC--CCccccceeecEEEccccCCCccCccCCcEEec------------------cCcccccc
Q 005404 387 NKIALLSIAVGLP-NVGLH--YETWETGVRGAVVLHGLDHGNKDLTWQKWSYQV------------------GLKGEAMN 445 (698)
Q Consensus 387 ~~L~ILven~Gr~-N~g~~--~~~~~kGI~g~V~l~g~~~~~~~l~~~~W~~~~------------------~l~~e~~~ 445 (698)
|+|+|+|+|||+. ++... -.+.++||++ ..|.|.....+++ .||++. ||.+||.+
T Consensus 776 NVLtV~vDn~G~d~~w~~G~d~~k~PRGi~~-~~l~g~~~~~~~~---~Wki~Gn~GGe~~~D~vRGplNeGGly~ER~G 851 (1003)
T 3og2_A 776 YILTVVVDSTGLDENWTTGDDSMKAPRGILD-YALTSSSGANVSI---SWKLTGNLGGEDYRDVFRGPLNEGGLFFERQG 851 (1003)
T ss_dssp EEEEEEECCCCCCCCCSBTCCGGGCCCEEEE-EEEEETTSCBCCC---EEEEESSTTTTSCSCTTTCSSSCCSSHHHHHT
T ss_pred eEEEEEEeCCCcccccccCcccccCCCccee-eeccCCCCCcccc---eEEEecccCCcccCCcccccccCCceeEEecc
Confidence 9999999999986 32221 1279999997 7886642110122 599873 68899999
Q ss_pred ccCCCCCCCCcccCC--------Cccc-cccCCceEEEEEEeC--C-CCCC-CeEEEeCC-----CceEEEEECCeeeee
Q 005404 446 LVSPSEATSVDWTRG--------SLAA-QGQQSLKWYKAYFDA--P-TGNE-PLALDLRS-----MGKGQVWINGQSIGR 507 (698)
Q Consensus 446 ~~~~~~~~~~~w~~~--------~~~~-~~~~~~~~Yr~~F~~--p-~~~d-~~~Ld~~g-----~gKG~vwVNG~nlGR 507 (698)
+|+|. .++.+|++. ++.. ....+.+|||++|++ | ++.| |+.|.+.. --|.++||||+++||
T Consensus 852 wHLPg-~~~~~W~~~~~~~~~~~sp~~g~~~~Gv~fyrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gk 930 (1003)
T 3og2_A 852 FHLPS-PPLSDFTHGPSSSSSSSSPLDGIAHAGIAFYAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGK 930 (1003)
T ss_dssp TTSSS-CCGGGSBCCCTTSTTCCCTTTCBSSSEEEEEEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEE
T ss_pred ccCCC-CCccccccccccccccCCcccCCCCCceEEEEEEeecCCCcccCceeEEEEECCCCCCcceEEEEEEeceeeee
Confidence 99996 777889875 2211 124589999999995 6 6656 67777753 247899999999999
Q ss_pred eeeccccCCCCccccCCCcCCccccCCCCCCceeeEecCccccc-CCcceEEE----EEeeCCCCcceEEEe
Q 005404 508 YWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLK-PTKNLLVV----FEELGGDASRISLVK 574 (698)
Q Consensus 508 YW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~vP~~~Lk-~g~N~ivv----fE~~g~~~~~i~~~~ 574 (698)
|-+. +| ||. -|+||.++|+ .|+|+|.| +|+.|+....|+|..
T Consensus 931 yv~~-----------iG-------------PQt-~FpvP~GILn~~G~NtialalWa~~~~ga~~~~~~L~~ 977 (1003)
T 3og2_A 931 YVSN-----------IG-------------PQT-EFPVPEGILDYNGDNWIGVALWALESRGAKVPGLALKS 977 (1003)
T ss_dssp EETT-----------TC-------------CCC-EEEECBTTBCTEEEEEEEEEEEECSTTCBCCSCEEEEE
T ss_pred ecCC-----------CC-------------Ccc-eecCCcccccCCCcceEEEEEEeccCCCCCCCceEEEE
Confidence 9865 46 995 5669999998 79999998 366677777788853
No 6
>2jx9_A Latrophilin 1; lectin, beta-sandwich, disulphide, glycosylated, G-protein C receptor, membrane, receptor, transducer, transmembrane, CE adhesion; HET: NAG; NMR {Mus musculus} PDB: 2jxa_A*
Probab=99.90 E-value=2.8e-24 Score=193.26 Aligned_cols=88 Identities=26% Similarity=0.597 Sum_probs=82.1
Q ss_pred cCCCCceeeecCCCCeEeeeeeeccCCC-CCCCCC--C--CCCCccCCChHHHHHHHhcCCCceEEEecCCCccCCCCCC
Q 005404 604 STGNAKVLLQCAPGQSITSIEFASFGTP-SGTCGS--F--QKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPCPN 678 (698)
Q Consensus 604 ~ce~~~~~L~C~~g~~Is~I~~A~YGr~-~~~C~~--~--~~~~C~~~~s~~~V~~~C~Gk~~C~v~a~~~~Fg~DPC~g 678 (698)
+||+++++|+|+.+++| .|.+|+|||+ .++|+. + .+++|++++++++|+++|+||++|+|.+++.+|| |||||
T Consensus 12 ~CE~~~~~L~C~~~~~i-~I~~A~YGr~~~~~C~~~~~~~~~~~C~~~~s~~~V~~~C~Gk~~C~v~a~~~~Fg-DPCpg 89 (106)
T 2jx9_A 12 ACEGYPIELRCPGSDVI-MVENANYGRTDDKICDADPFQMENVQCYLPDAFKIMSQRCNNRTQCVVVAGSDAFP-DPCPG 89 (106)
T ss_dssp EETTSEEEEECSTTEEE-EEEEEEEEBSCSSSSCCCHHHHSCCCBCCTHHHHHHHHHHTTBSEEEEESSGGGSC-CSSTT
T ss_pred ecCCCCEEEEeCCCCEE-EEEeecCCCCCCCccCCCCCcccCCccCCccHHHHHHHHcCCCCceEEEccccccC-CCCCC
Confidence 59999999999988788 6999999999 699986 3 4689999999999999999999999999999999 99999
Q ss_pred CCceEEEEEEeecCC
Q 005404 679 VLKRLSVQAVCSTAD 693 (698)
Q Consensus 679 ~~KYL~V~Y~C~p~~ 693 (698)
++|||+|+|+|+|.+
T Consensus 90 t~KyL~V~y~C~~~~ 104 (106)
T 2jx9_A 90 TYKYLEVQYDCVPYK 104 (106)
T ss_dssp SCCEEEEEEEEEESS
T ss_pred ccEEEEEEEEeeccc
Confidence 999999999999875
No 7
>2zx2_A CSL3; lectin, rhamnose, innate immunity, immune system, sugar binding protein; HET: RAM; 1.80A {Oncorhynchus keta} PDB: 2zx1_A 2zx0_A* 2zx3_A* 2zx4_A*
Probab=99.84 E-value=1.6e-21 Score=194.02 Aligned_cols=89 Identities=27% Similarity=0.540 Sum_probs=82.4
Q ss_pred cCCCCceeeecCCCCeEeeeeeeccCCC-CCCCCC----C--CCCCccCCChHHHHHHHhcCCCceEEEecCCCccCCCC
Q 005404 604 STGNAKVLLQCAPGQSITSIEFASFGTP-SGTCGS----F--QKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPC 676 (698)
Q Consensus 604 ~ce~~~~~L~C~~g~~Is~I~~A~YGr~-~~~C~~----~--~~~~C~~~~s~~~V~~~C~Gk~~C~v~a~~~~Fg~DPC 676 (698)
+||+++++|+||.| +| .|.+|+|||. .++|+. + .+++|++++++++|+++|+||++|+|.+++.+|| |||
T Consensus 5 ~Ce~~~~~L~C~~g-~I-~I~~A~yGR~~~~~C~~~~p~~~~~~~~C~~~~s~~~v~~~C~Gk~~C~v~a~~~~Fg-DPC 81 (195)
T 2zx2_A 5 TCEGSDALLQCDGA-KI-HIKRANYGRRQHDVCSIGRPDNQLTDTNCLSQSSTSKMAERCGGKSECIVPASNFVFG-DPC 81 (195)
T ss_dssp EETTSEEEEECTTS-EE-EEEEEEEEBSCSSTTCTTCCGGGSCCCCBCCTTHHHHHHHHHTTCSEEEEECSHHHHC-CSS
T ss_pred EccCCCEEEEcCCC-EE-EEEEecCCCCCCCcCCCCCCCccccCCccCCCchhHHHHHhCCCCCceeEEcCccccC-CCC
Confidence 59999999999999 99 6999999987 589975 2 5789999999999999999999999999999999 999
Q ss_pred CCCCceEEEEEEeecCCCC
Q 005404 677 PNVLKRLSVQAVCSTADAN 695 (698)
Q Consensus 677 ~g~~KYL~V~Y~C~p~~~~ 695 (698)
||++|||+|+|+|+|.+..
T Consensus 82 ~g~~KyL~V~y~C~~~~~~ 100 (195)
T 2zx2_A 82 VGTYKYLDTKYSCVQQQET 100 (195)
T ss_dssp TTSCCEEEEEEEEECSSCC
T ss_pred CCceeeeeeeeeecccccc
Confidence 9999999999999987654
No 8
>2zx2_A CSL3; lectin, rhamnose, innate immunity, immune system, sugar binding protein; HET: RAM; 1.80A {Oncorhynchus keta} PDB: 2zx1_A 2zx0_A* 2zx3_A* 2zx4_A*
Probab=99.82 E-value=6.7e-21 Score=189.46 Aligned_cols=84 Identities=27% Similarity=0.632 Sum_probs=79.3
Q ss_pred cCCCCceeeecCCCCeEeeeeeeccCCC-CCCCC------CCCCCCccCCChHHHHHHHhcCCCceEEEecCCCccCCCC
Q 005404 604 STGNAKVLLQCAPGQSITSIEFASFGTP-SGTCG------SFQKGTCHAPNSHAMLEKECIGQESCSIFISSGVFGTDPC 676 (698)
Q Consensus 604 ~ce~~~~~L~C~~g~~Is~I~~A~YGr~-~~~C~------~~~~~~C~~~~s~~~V~~~C~Gk~~C~v~a~~~~Fg~DPC 676 (698)
+||+++++|+|+.| +| .|.+|+|||+ .++|+ .+.+++|++++++++|+++|+||++|+|.+++.+|| |||
T Consensus 105 ~CE~~~~~L~C~~g-~I-~I~~A~yGr~~~~~C~~~~p~~~~~~~~C~~~~s~~~v~~~C~Gk~~C~v~a~~~~FG-DPC 181 (195)
T 2zx2_A 105 ICEGSDSQLLCDRG-EI-RIQRANYGRRQHDVCSIGRPHQQLKNTNCLSQSTTSKMAERCDGKRQCIVKVSNSVFG-DPC 181 (195)
T ss_dssp EETTSEEEEECSSS-CE-EEEEEEEEBSCSSTTCTTCCGGGTCCCCBCCTTHHHHHHHHHTTCSEEEEECSHHHHC-CSS
T ss_pred cccccceeeeEcCC-EE-EEEeecCCCCCCCccCCCCCCCCccCCccCCccHHHHHHHHCCCCCCcEEEcCcccCC-CCC
Confidence 49999999999999 99 7999999996 68997 346899999999999999999999999999999999 999
Q ss_pred CCCCceEEEEEEee
Q 005404 677 PNVLKRLSVQAVCS 690 (698)
Q Consensus 677 ~g~~KYL~V~Y~C~ 690 (698)
||++|||+|+|.|+
T Consensus 182 ~gt~KyL~V~y~Cv 195 (195)
T 2zx2_A 182 VGTYKYLDVAYTCD 195 (195)
T ss_dssp TTSCCEEEEEEEEC
T ss_pred CCCCeEEEEEEEEC
Confidence 99999999999995
No 9
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=98.00 E-value=5.2e-05 Score=87.99 Aligned_cols=87 Identities=9% Similarity=0.060 Sum_probs=63.6
Q ss_pred CCCceeeeccCccccccCCCcCCCCHHHHHHHHHHHHHcCCceeeeeEeeccCCCCCCCCCCcccccccCCCCCCCCCCC
Q 005404 95 YKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLM 174 (698)
Q Consensus 95 ~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YMfhGGTNfG~~~G~~~~~TSYDY~APl~E~G~~ 174 (698)
++|.+.|||.+|..+ |+.......+..+.......++.|+..++|+-+. .+++...+|+++ .|+++|.+
T Consensus 305 ~kP~~i~E~~~~~~~-w~~~~~~~~pg~~r~~~~~~~a~Ga~~~~~f~w~---------~~~~~~E~~~~g-~l~~~g~~ 373 (645)
T 1kwg_A 305 RGRFWVMEQQPGPVN-WAPHNPSPAPGMVRLWTWEALAHGAEVVSYFRWR---------QAPFAQEQMHAG-LHRPDSAP 373 (645)
T ss_dssp TTCEEEEEECCSCCS-SSSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSB---------CCSSSTTTTSCC-SBCTTSCB
T ss_pred CCCEEEecCCCCCCC-CccCCCCCCccHHHHHHHHHHhcCCCEEEEeeec---------cCCCCccccccc-ccCCCCCc
Confidence 489999999998765 8874333334444444456688998876664333 234445788888 89999999
Q ss_pred CchhHHHHHHHHHHHHhhh
Q 005404 175 RQPKYGHLKQLHEAIKLCE 193 (698)
Q Consensus 175 ~~~ky~~lr~l~~~~~~~~ 193 (698)
+++|.+++++..+++..+
T Consensus 374 -~~~~~e~~~~~~~l~~~~ 391 (645)
T 1kwg_A 374 -DQGFFEAKRVAEELAALA 391 (645)
T ss_dssp -CHHHHHHHHHHHHHHTCC
T ss_pred -CHHHHHHHHHHHHHHhhc
Confidence 799999999999988653
No 10
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=97.98 E-value=1.5e-06 Score=97.62 Aligned_cols=50 Identities=24% Similarity=0.216 Sum_probs=42.5
Q ss_pred ChhHHHHHHHHHhccCceeccCCcEEEEEeccccCCccccCCCCcHHHHHHHHHHHHh
Q 005404 1 MQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVG 58 (698)
Q Consensus 1 ~~~~~~~i~~~l~~~~l~~~~GGPII~vQvENEYG~~~~~~g~~d~~Ym~~L~~~a~~ 58 (698)
+++|+++|+++|+ +++. ++|||||+|||||||++ + .++.|++++++..|+
T Consensus 177 ~r~~~~~l~~~La--~r~~-~~p~VI~wQIeNEyG~~----g-~~~~Y~~~~~~aFR~ 226 (552)
T 3u7v_A 177 DRKAFVALMTHLK--AKDA-AQKTVIMVQVENETGTY----G-SVRDFGPAAQKVFNG 226 (552)
T ss_dssp HHHHHHHHHHHHH--HHHT-TTCCEEEEEEEESCSBS----S-CSSCCSHHHHHHHHS
T ss_pred HHHHHHHHHHHHH--HHhC-CCCcEEEEEecccCCCC----C-CcchhhHHHHHHHHH
Confidence 3789999999999 7764 99999999999999985 3 567788888888775
No 11
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=97.21 E-value=0.0015 Score=76.24 Aligned_cols=98 Identities=20% Similarity=0.234 Sum_probs=72.8
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCC-cCeEEEEEee
Q 005404 317 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAG-INKIALLSIA 395 (698)
Q Consensus 317 ~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g-~~~L~ILven 395 (698)
..|..|||++|.++... .+....|.+.++...+.|||||+++|...+.. ..+.++++-.|+.| .|+|.|.|.|
T Consensus 58 ~~g~~wYr~~f~~p~~~----~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~--~~f~~dIt~~l~~G~~N~l~V~v~~ 131 (692)
T 3fn9_A 58 YEGAGYYRKTQFFPHDL----EGKRVFLRFEGVGACAEVYVNGKLAGTHKGGY--SAFACEIGTALKLGAENEIIVKADN 131 (692)
T ss_dssp CCSEEEEEEEEEECGGG----TTCEEEEEESCCBSEEEEEETTEEEEEEECTT--SCEEEECGGGCCTTEEEEEEEEEEC
T ss_pred cceEEEEEEEEEECchh----CCCeEEEEECCccEeeEEEECCEEeeeEcCCc--ceEEEEChHhcCCCCceEEEEEEEC
Confidence 67999999999886431 24456899999999999999999999976532 34667666557788 8999999999
Q ss_pred cCCcccccC----CCccccceeecEEEccc
Q 005404 396 VGLPNVGLH----YETWETGVRGAVVLHGL 421 (698)
Q Consensus 396 ~Gr~N~g~~----~~~~~kGI~g~V~l~g~ 421 (698)
.-...+-+. + ....||..+|.|.-.
T Consensus 132 ~~~~~~~p~~~d~~-~~~~GI~R~V~L~~~ 160 (692)
T 3fn9_A 132 KARPDVIPVNQNLF-GVYGGIYRPVWLIVT 160 (692)
T ss_dssp CCCTTSSSCSSSSS-CCCCBCCSCEEEEEE
T ss_pred CCCCCcCCCCCccc-ccCCCcceeEEEEEE
Confidence 765443220 1 124699999999544
No 12
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=97.18 E-value=0.0049 Score=71.83 Aligned_cols=93 Identities=10% Similarity=0.152 Sum_probs=63.0
Q ss_pred CCCCCceeeeccCccccccCCCcCCCCHHHHHHHHHHHHHcCCceeeeeEeeccCCCCCCCCCCcccccccCCCCCCCCC
Q 005404 93 KPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYG 172 (698)
Q Consensus 93 ~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YMfhGGTNfG~~~G~~~~~TSYDY~APl~E~G 172 (698)
.+++|.++||.++| ...|........+..+....-..++.|+..+.||-++...+ | ...| -.+.|+-+|
T Consensus 298 ~~g~p~~~mE~~~~-~~~w~~~~~~~~pg~~r~~~~~~~A~Ga~~v~~f~wr~~~~-g--------~E~~-h~g~~~~~g 366 (675)
T 3tty_A 298 KSGQPFMLMEQTPG-VQNWQPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSVG-A--------CEKY-HGAVIEHVG 366 (675)
T ss_dssp TTTCCEEEEECCSS-CCTTSSBCCCCCTTHHHHHHHHHHHTTEEEEEESCSBCCCS-G--------GGTT-SCCSBCTTC
T ss_pred cCCCCeEEecCCCC-CCCCcCCCCCCCccHHHHHHHHHHhcccCeEeeeeccCCCC-c--------hhhh-hccccCCCC
Confidence 34689999999987 45576533333455555555567899999888888765211 1 1122 356788889
Q ss_pred CCCchhHHHHHHHHHHHHhhhccc
Q 005404 173 LMRQPKYGHLKQLHEAIKLCEYAL 196 (698)
Q Consensus 173 ~~~~~ky~~lr~l~~~~~~~~~~l 196 (698)
.+.++.|.+++++.+.++..++.+
T Consensus 367 ~~~~r~~~ev~~~~~~l~~l~~~~ 390 (675)
T 3tty_A 367 HEHTRVFRECAELGKELQQLGDTI 390 (675)
T ss_dssp SSCSHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCchHHHHHHHHHHHHHHhhhhh
Confidence 875577999999999888774434
No 13
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=97.12 E-value=0.0019 Score=74.35 Aligned_cols=98 Identities=19% Similarity=0.177 Sum_probs=70.6
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCcC-eEEEEEee
Q 005404 317 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGIN-KIALLSIA 395 (698)
Q Consensus 317 ~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~-~L~ILven 395 (698)
..|.+|||++|.++... .+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.|.| +|.|.|.|
T Consensus 65 ~~G~~wY~~~f~~p~~~----~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~--~p~~~dit~~l~~G~nn~l~V~v~n 138 (605)
T 3lpf_A 65 YAGNVWYQREVFIPKGW----AGQRIVLRFDAVTHYGKVWVNNQEVMEHQGGY--TPFEADVTPYVIAGKSVRITVCVNN 138 (605)
T ss_dssp CCSEEEEEEEEECCTTC----SSCEEEEEESCCBSEEEEEESSCEEEEECCSS--SCEEEECGGGCCTTSEEEEEEEEEC
T ss_pred cceEEEEEEEEECCccc----CCCEEEEEECCcceEEEEEECCEEEEEEcCCC--CcceeechhhccCCCeEEEEEEEec
Confidence 68999999999886431 23456899999999999999999999876432 3466766655777865 89999987
Q ss_pred cCCcc------------------cccCCCccccceeecEEEccc
Q 005404 396 VGLPN------------------VGLHYETWETGVRGAVVLHGL 421 (698)
Q Consensus 396 ~Gr~N------------------~g~~~~~~~kGI~g~V~l~g~ 421 (698)
.-+-. |...+ ....||..+|.|...
T Consensus 139 ~~~~~~~P~g~~~~~~~g~~k~~~~~d~-~~~~GI~R~V~L~~~ 181 (605)
T 3lpf_A 139 ELNWQTIPPGMVITDENGKKKQSYFHDF-FNYAGIHRSVMLYTT 181 (605)
T ss_dssp CCCTTSSSCEEEEECTTSCEEEEESSSB-CCCCBCCSCEEEEEE
T ss_pred CCCcccCCCccccccccCcccccccccc-cccCcccceEEEEEE
Confidence 53211 11111 246899999999554
No 14
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=97.10 E-value=0.0017 Score=76.99 Aligned_cols=96 Identities=23% Similarity=0.266 Sum_probs=71.7
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCcCeEEEEEeecC
Q 005404 318 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVG 397 (698)
Q Consensus 318 ~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~G 397 (698)
.|..|||++|.++... .+....|.+.++...+.|||||+++|...+.. ..+.++++-.|+.|.|+|.|.|.|.-
T Consensus 65 ~g~~wYrk~f~vp~~~----~~~~v~L~f~gv~~~a~V~vNG~~vG~~~~g~--~pf~~DIT~~Lk~G~N~L~V~V~n~~ 138 (801)
T 3gm8_A 65 AGISWYRKTFTIPSKW----KNKKVQILFEGVYLNSEVWINGHWLGKRPNGY--ISFVYDLTPYLQEGKNQIAVKVDHSK 138 (801)
T ss_dssp CEEEEEEEEEECCSGG----GSCEEEEEESCCBSCEEEEETTEEEEEECCSS--CCEEEECGGGCCSSEEEEEEEEEECS
T ss_pred CceEEEEEEEEcCccc----CCCEEEEEECccceEEEEEECCEEeecccCCc--ccEEEECcHhccCCCcEEEEEEECCC
Confidence 6899999999886432 23456889999999999999999999976432 34667665557888899999999864
Q ss_pred CcccccCCCccccceeecEEEcccc
Q 005404 398 LPNVGLHYETWETGVRGAVVLHGLD 422 (698)
Q Consensus 398 r~N~g~~~~~~~kGI~g~V~l~g~~ 422 (698)
..+. ..+ ...||..+|.|...+
T Consensus 139 ~~~~-~w~--~~~GI~R~V~L~~~~ 160 (801)
T 3gm8_A 139 ALTG-RWY--TGSGIYRPVYLLVSN 160 (801)
T ss_dssp CCCC-SSC--CCCBCCSCEEEEEEC
T ss_pred CCCC-ccc--cCCCeeeEEEEEEEC
Confidence 3232 222 247999999996543
No 15
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=97.01 E-value=0.0015 Score=75.24 Aligned_cols=76 Identities=17% Similarity=0.177 Sum_probs=56.8
Q ss_pred CccEEEEEEEeecCCCcccc-cCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCc----CeEEE
Q 005404 317 TSDYLWYMTSVEISSSESFL-RGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGI----NKIAL 391 (698)
Q Consensus 317 ~~Gy~~Y~t~i~~~~~~~~l-~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~----~~L~I 391 (698)
..|++|||++|.++.. +. ..+....|.+.++...+.|||||++||...+.. ..+.++++-.|+.|. |+|.|
T Consensus 75 ~~G~~wYr~~f~~p~~--~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~g~--~~~~~dit~~l~~g~~~~~n~l~V 150 (613)
T 3hn3_A 75 FVGWVWYEREVILPER--WTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHEGGY--LPFEADISNLVQVGPLPSRLRITI 150 (613)
T ss_dssp CCSEEEEEEEECCCHH--HHHCTTEEEEEEESCCCSEEEEEETTEEEEEEESSS--SCEEEECHHHHCCC---CCEEEEE
T ss_pred CceeEEEEEEEEeCch--hhhcCCCEEEEEECCcceEEEEEECCEEEeEEcCCc--ceEEEEChhhhcCCCCCcceEEEE
Confidence 6799999999987632 11 113346789999999999999999999976532 346666654467774 89999
Q ss_pred EEeec
Q 005404 392 LSIAV 396 (698)
Q Consensus 392 Lven~ 396 (698)
.|.|.
T Consensus 151 ~v~n~ 155 (613)
T 3hn3_A 151 AINNT 155 (613)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99874
No 16
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=96.88 E-value=0.0042 Score=72.25 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=70.1
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCC-cCeEEEEEee
Q 005404 317 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAG-INKIALLSIA 395 (698)
Q Consensus 317 ~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g-~~~L~ILven 395 (698)
..|..|||++|.++... .+....|.+.++...+.|||||+++|...+.. ..+.+++.-.|+.| .|+|.|.|.|
T Consensus 47 ~~g~~wYr~~f~~p~~~----~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~--~~~~~dit~~l~~G~~N~l~V~v~~ 120 (667)
T 3cmg_A 47 KRGIGNYEKALYIRPEW----KGKRLFLRFDGVNSIADVFINRKHIGEHRGGY--GAFIFEITDLVKYGEKNSVLVRANN 120 (667)
T ss_dssp CCSEEEEEEEEECCGGG----TTSEEEEEESCCBSEEEEEETTEEEEEEECSS--SCEEEECTTTSCTTSEEEEEEEEEC
T ss_pred cceeEEEEEEEECCccc----CCCEEEEEECCccceeEEEECCEEEeeecCCc--ccEEEECCHHHCCCCCcEEEEEEec
Confidence 57999999999876421 23456899999999999999999999976432 34666665447777 7999999988
Q ss_pred cCCccccc---CCCccccceeecEEEccc
Q 005404 396 VGLPNVGL---HYETWETGVRGAVVLHGL 421 (698)
Q Consensus 396 ~Gr~N~g~---~~~~~~kGI~g~V~l~g~ 421 (698)
.-..+.-+ .+ ....||..+|.|...
T Consensus 121 ~~~~~~~p~~~d~-~~~~GI~R~V~L~~~ 148 (667)
T 3cmg_A 121 GEQLDIMPLVGDF-NFYGGIYRDVHLLIT 148 (667)
T ss_dssp CCCSSSSCSSCSS-CCCCBCCSCEEEEEE
T ss_pred CCCcccCCccCcc-cccCccCceEEEEEE
Confidence 53322111 11 245799888988543
No 17
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=96.67 E-value=0.0055 Score=74.36 Aligned_cols=96 Identities=21% Similarity=0.229 Sum_probs=69.0
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCcCeEEEEEeec
Q 005404 317 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAV 396 (698)
Q Consensus 317 ~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~ 396 (698)
..+..|||++|.++... .|....|.+.++...+.|||||++||...+. ...+.+++.-.|+.|.|+|.|.|.+.
T Consensus 124 ~~~~~~Yrr~F~vp~~~----~g~~v~L~F~gv~~~a~V~vNG~~vG~~~gg--~~p~~~DIT~~L~~G~N~L~V~V~~~ 197 (1010)
T 3bga_A 124 ENEVGSYRRTFKVPADW----KGRRVVLCCEGVISFYYVWVNGKLLGYNQGS--KTAAEWDITDVLSEGENVVALEVYRW 197 (1010)
T ss_dssp TCEEEEEEEEEECCGGG----TTSEEEEEESCEESEEEEEETTEEEEEEECS--SSCEEEECGGGCCSSEEEEEEEEESC
T ss_pred cCcEEEEEEEeEeCccc----CCCEEEEEECCCCceeEEEECCEEEeeEeCC--CCcceeehhhhccCCCcEEEEEEEec
Confidence 36889999999876421 2345689999999999999999999987653 23466666545788899999999753
Q ss_pred CCcccccCCC----ccccceeecEEEccc
Q 005404 397 GLPNVGLHYE----TWETGVRGAVVLHGL 421 (698)
Q Consensus 397 Gr~N~g~~~~----~~~kGI~g~V~l~g~ 421 (698)
- .|..++ ....||..+|.|...
T Consensus 198 ~---d~s~~e~~d~w~~sGI~R~V~L~~~ 223 (1010)
T 3bga_A 198 S---SGAYLECQDMWRLSGIERDVYLYST 223 (1010)
T ss_dssp C---GGGGGBCCSEEECCEECSCEEEEEE
T ss_pred C---CCcccccCCccccCCcceEEEEEEe
Confidence 2 122221 124799999988543
No 18
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=96.39 E-value=0.00018 Score=81.13 Aligned_cols=132 Identities=8% Similarity=-0.080 Sum_probs=80.2
Q ss_pred hHHHHHHHHHhccCceeccCCcEEE----------------EEeccccCCccc-cCCCCcHHHHHHHHHHHHhCCCCcce
Q 005404 3 GFTQKIVQMMKNEKLFASQGGPIIL----------------SQIENEYGPESK-SLGAAGHAYVNWAAKMAVGLDTGVPW 65 (698)
Q Consensus 3 ~~~~~i~~~l~~~~l~~~~GGPII~----------------vQvENEYG~~~~-~~g~~d~~Ym~~L~~~a~~~Gi~vp~ 65 (698)
+.|.++++.++ +++..++ +||| +|||||||.++. .+-..++.+++.+++.+++..=+++-
T Consensus 140 ~~y~~~~~~la--~r~~~~~-~vI~eI~vglG~~GelryPs~qv~NE~g~~g~~~~~~y~~~~~~~fr~~l~~~ygtl~~ 216 (516)
T 1vem_A 140 KEYGELYTAFA--AAMKPYK-DVIAKIYLSGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNE 216 (516)
T ss_dssp HHHHHHHHHHH--HHTGGGG-GGBCCEEECCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHSSHHH
T ss_pred HHHHHHHHHHH--HHHccCC-CEEEEeeccccccccccccccccccCcCCCCccchhccCHHHHHHHHHHHHHhcCCHHH
Confidence 34666888888 6765554 8999 999999997521 01123788899999988764223321
Q ss_pred EeecCCCCCCccccCCCCcccccCCCC-CCCCCceeeeccCccccccCCCcCCCCHHHHHHHHHHHHHcCCce------e
Q 005404 66 VMCKEDDAPDPVINSCNGFYCDAFSPN-KPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSF------F 138 (698)
Q Consensus 66 ~~~~~~~~~~~v~~~~ng~~~~~f~~~-~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~------~ 138 (698)
.. ..+ |....+|... .|..+ ..|++.||+++||....+-.++.++..++++|+.+.++ +
T Consensus 217 ln-----------~aW-g~~~~~~~~i~~P~~~--~~~~~~gw~s~~~~df~~f~s~~l~~~~~~~l~~a~~~f~~~~~~ 282 (516)
T 1vem_A 217 VN-----------KAW-GTKLISELAILPPSDG--EQFLMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQV 282 (516)
T ss_dssp HH-----------HHH-TCCCSSGGGCCSCSCH--HHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred HH-----------HHh-CCCCCCHHHhCCcccc--ccccCCCchhhhcChHHHhchHHHHHHHHHHHHHHHHhcCCCcCc
Confidence 10 000 0001223322 34433 45889999999998776666677777777777654332 3
Q ss_pred eeeEeeccCCCCC
Q 005404 139 NYYMYHGGTNFGR 151 (698)
Q Consensus 139 n~YMfhGGTNfG~ 151 (698)
.+..--.|.+|-+
T Consensus 283 ~~~~kv~g~hw~y 295 (516)
T 1vem_A 283 PIGAKIAGVHWQY 295 (516)
T ss_dssp CEEEEECCCCTTT
T ss_pred eEEEEeCcceecC
Confidence 4555566666543
No 19
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=96.37 E-value=0.007 Score=73.58 Aligned_cols=98 Identities=19% Similarity=0.258 Sum_probs=69.1
Q ss_pred ccEEEEEEEeecCCCcccccCC-CCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCcCeEEEEEeec
Q 005404 318 SDYLWYMTSVEISSSESFLRGG-QKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAV 396 (698)
Q Consensus 318 ~Gy~~Y~t~i~~~~~~~~l~~g-~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~ 396 (698)
.+..|||++|.++.. ++..| ....|.+.++...+.|||||++||...+. ...+.+++.-.|+.|.|+|.|.|.+.
T Consensus 117 ~~~~wYrr~F~vp~~--~~~~g~~rv~L~F~gv~~~a~V~vNG~~VG~~~gg--~~p~~~DIT~~Lk~G~N~L~V~V~~~ 192 (1024)
T 1yq2_A 117 NPTGDFRRRFDVPAQ--WFESTTAALTLRFDGVESRYKVWVNGQEIGVGSGS--RLAQEFDVSDALRAGSNLLVVRVHQW 192 (1024)
T ss_dssp CCEEEEEEEEEECGG--GGSTTEEEEEEEESCEESCEEEEETTEEEEEECCT--TSCEEEECTTTCCSEEEEEEEEEESS
T ss_pred CceEEEEEEeEECch--HhcCCCceEEEEECCCCceEEEEECCEEEEEEeCC--ccceEEecHHhccCCCcEEEEEEEec
Confidence 578899999987632 22123 45789999999999999999999987643 23466666545778899999999743
Q ss_pred CCcccccCCC----ccccceeecEEEcccc
Q 005404 397 GLPNVGLHYE----TWETGVRGAVVLHGLD 422 (698)
Q Consensus 397 Gr~N~g~~~~----~~~kGI~g~V~l~g~~ 422 (698)
- .|..++ ....||..+|.|...+
T Consensus 193 ~---d~~~~e~~d~w~~~GI~R~V~L~~~p 219 (1024)
T 1yq2_A 193 S---AASYLEDQDQWWLPGIFRDVTLQARP 219 (1024)
T ss_dssp C---GGGGGBCCSEEECCEECSCEEEEEEE
T ss_pred C---CCCccccCCccccCCcceEEEEEEcC
Confidence 2 121121 1347999999996543
No 20
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=96.14 E-value=0.01 Score=72.18 Aligned_cols=96 Identities=22% Similarity=0.286 Sum_probs=67.4
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCcCeEEEEEeecC
Q 005404 318 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVG 397 (698)
Q Consensus 318 ~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~G 397 (698)
.|..|||++|.++.. + +.|....|.+.++...+.|||||+++|...+.. ..+.+++.-.|+.|.|+|.|.|.+.-
T Consensus 118 ~~~g~Yrr~F~vp~~--~-~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~--~p~~~DIT~~L~~G~N~L~V~V~~~~ 192 (1023)
T 1jz7_A 118 NPTGCYSLTFNVDES--W-LQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSR--LPSEFDLSAFLRAGENRLAVMVLRWS 192 (1023)
T ss_dssp CCEEEEEEEEEECHH--H-HHSSEEEEEESCEESEEEEEETTEEEEEEECTT--SCEEEECTTTCCSEEEEEEEEEESCC
T ss_pred CcEEEEEEEEEeCch--h-cCCCEEEEEECCCCcceEEEECCEEEccccCCC--CceEEecHhhccCCCcEEEEEEEecC
Confidence 578899999987632 1 102346899999999999999999999876432 34666665457788899999987432
Q ss_pred CcccccCCC----ccccceeecEEEccc
Q 005404 398 LPNVGLHYE----TWETGVRGAVVLHGL 421 (698)
Q Consensus 398 r~N~g~~~~----~~~kGI~g~V~l~g~ 421 (698)
.|..++ ....||..+|.|...
T Consensus 193 ---d~s~~e~qd~w~~sGI~R~V~L~~~ 217 (1023)
T 1jz7_A 193 ---DGSYLEDQDMWRMSGIFRDVSLLHK 217 (1023)
T ss_dssp ---GGGGGBCCSEEECCEECSCEEEEEE
T ss_pred ---CCCccccCCccccCCcCceEEEEEc
Confidence 222222 134799999998544
No 21
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=96.11 E-value=0.0084 Score=73.13 Aligned_cols=98 Identities=16% Similarity=0.247 Sum_probs=67.0
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEc-cccccceEEeecccccCCcCeEEEEEeec
Q 005404 318 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFG-TRENRRFTFSGPANLRAGINKIALLSIAV 396 (698)
Q Consensus 318 ~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~-~~~~~~~~~~~~~~l~~g~~~L~ILven~ 396 (698)
.|..|||++|.+ ... +....|.+.++...+.|||||+++|.... ......+.+++.-.|+.|.|+|.|.|.+.
T Consensus 118 ~~~~wYrr~f~v-~~~-----~~~v~L~F~gvd~~a~V~vNG~~vg~~~~h~g~~~~~~~DIt~~l~~G~N~L~V~v~~~ 191 (1032)
T 2vzs_A 118 SVPWWYRTDLNV-DDT-----SSRTYLDFSGVLSKADVWVNGTKVATKDQVNGAYTRHDLDITAQVHTGVNSVAFKVYPN 191 (1032)
T ss_dssp SSCEEEEEEEEE-SCC-----SSEEEEEECCEESBEEEEETTEEEECTTTSBSTTCCEEEECTTTCCSEEEEEEEEECCC
T ss_pred CccEEEEEEEEE-eCC-----CCEEEEEECCcccceEEEECCEEecccccccCcceeEEEECcHHhCCCCcEEEEEEeCC
Confidence 578999999987 211 34468899999999999999999985420 11123466666545777899999999986
Q ss_pred CC---cccc-----cCCCccccceeecEEEccc
Q 005404 397 GL---PNVG-----LHYETWETGVRGAVVLHGL 421 (698)
Q Consensus 397 Gr---~N~g-----~~~~~~~kGI~g~V~l~g~ 421 (698)
.. ..+| +.......||..+|.|...
T Consensus 192 ~~~~~~~~g~~Dw~~~~~~~~sGI~r~V~L~~~ 224 (1032)
T 2vzs_A 192 DPNRDLSMGWIDWAQTPPDQNMGIVRDVLVRRS 224 (1032)
T ss_dssp CTTTSSSCCCTTTSCCCTTTTCEECSCEEEEEE
T ss_pred CCCccccCCccccccCcCCCCCCcceeeEEEEc
Confidence 43 1122 2111124699999998543
No 22
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=96.09 E-value=0.0086 Score=72.76 Aligned_cols=100 Identities=19% Similarity=0.255 Sum_probs=69.1
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCcCeEEEEEeecC
Q 005404 318 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVG 397 (698)
Q Consensus 318 ~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~G 397 (698)
.|-.|||++|.++.. ++ .+....|.+.++...+.|||||++||...+.. ..+.+++.-.|+.|.|+|.|.|.+.-
T Consensus 111 n~~g~Yrr~f~vp~~--~~-~~~~v~L~F~gv~~~a~V~vNG~~vG~~~gg~--~p~~~DIT~~lk~G~N~L~V~V~~~s 185 (1032)
T 3oba_A 111 NPTGVYARTFELDSK--SI-ESFEHRLRFEGVDNCYELYVNGQYVGFNKGSR--NGAEFDIQKYVSEGENLVVVKVFKWS 185 (1032)
T ss_dssp CCEEEEEEEEEECHH--HH-HHEEEEEEESCEESEEEEEETTEEEEEEECTT--SCEEEECTTTCCSEEEEEEEEEESCC
T ss_pred CCeEEEEEEEEECch--hc-CCCEEEEEECCcceeEEEEECCEEEEEEeCCc--ccEEEEChhhccCCcEEEEEEEECCC
Confidence 588899999988632 11 12346889999999999999999999976532 34666665447778899999998642
Q ss_pred CcccccCCC-ccccceeecEEEcccc
Q 005404 398 LPNVGLHYE-TWETGVRGAVVLHGLD 422 (698)
Q Consensus 398 r~N~g~~~~-~~~kGI~g~V~l~g~~ 422 (698)
.-.|-..-+ ...-||..+|.|...+
T Consensus 186 d~s~~edqd~w~~sGI~R~V~L~~~p 211 (1032)
T 3oba_A 186 DSTYIEDQDQWWLSGIYRDVSLLKLP 211 (1032)
T ss_dssp GGGGGBCCSEEECCEECSCEEEEEEE
T ss_pred CCCccCCCCcCccCccceEEEEEEEC
Confidence 212211000 1346999999996554
No 23
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=95.57 E-value=0.035 Score=67.49 Aligned_cols=160 Identities=17% Similarity=0.211 Sum_probs=94.2
Q ss_pred HHHHHHHHhccCceeccCCcEEEEEeccccCCccccCCCCcHHHHHHHHHHHHhCCCCcceEeecCCCCC-CccccCCCC
Q 005404 5 TQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAP-DPVINSCNG 83 (698)
Q Consensus 5 ~~~i~~~l~~~~l~~~~GGPII~vQvENEYG~~~~~~g~~d~~Ym~~L~~~a~~~Gi~vp~~~~~~~~~~-~~v~~~~ng 83 (698)
.+++-.+|+ . ++|--.|||.++.||.+. | .+++.|.+++++...+-|+....+.... .+++...-.
T Consensus 419 ~~~~~~mV~--r--~rNHPSIi~WslgNE~~~-----g----~~~~~l~~~ik~~DptRpv~~~~~~~~~~~Dv~s~~Y~ 485 (1024)
T 1yq2_A 419 VDRMERTVE--R--DKNHPSIVMWSLGNESGT-----G----SNLAAMAAWAHARDSSRPVHYEGDYTGAYTDVYSRMYS 485 (1024)
T ss_dssp HHHHHHHHH--H--HTTCTTEEEEECCSSCCC-----C----HHHHHHHHHHHHHCTTSCEECTTCTTCSSCSSEEEESC
T ss_pred HHHHHHHHH--H--cCCCCeEEEEECCcCcch-----H----HHHHHHHHHHHHhCCCceEEeCCcccCCccceeccCCC
Confidence 445555555 3 368899999999999873 3 5799999999998888876543321110 122211000
Q ss_pred c--ccccCCC----------------CCCCCCceeeeccCccccccCCCcCCCCHHHHHHHHHHH-HHcCCce-----e-
Q 005404 84 F--YCDAFSP----------------NKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARF-IQKGGSF-----F- 138 (698)
Q Consensus 84 ~--~~~~f~~----------------~~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~-l~~g~s~-----~- 138 (698)
. .++.+.. ..+++|++.+||..++...+|. .+++-..+.+. ...|+-+ +
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~i~~Eygha~gn~~g~------~~~y~~~~~~~~~~~G~fiW~~~D~~ 559 (1024)
T 1yq2_A 486 SIPETDSIGRNDSHALLLGCDSAESARQRTKPFILCEYVHAMGNGPGA------MDQYEALVDKYPRLHGGFVWEWRDHG 559 (1024)
T ss_dssp CHHHHHHHHCSSCCCCCTTCCHHHHHHHTTSCEEEEEESCCCSSCCCC------HHHHHHHHHHCTTEEEEEESCSBCCC
T ss_pred CHHHHHHHHhcccccccccccchhhccCCCCceEEEeeccccCCCccC------HHHHHHHHHhCCcceEEEEeeccccc
Confidence 0 0111111 2457999999998776665553 23332222110 0012110 0
Q ss_pred --------eeeEeeccCCCCCCCCCCcccccccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 005404 139 --------NYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAI 189 (698)
Q Consensus 139 --------n~YMfhGGTNfG~~~G~~~~~TSYDY~APl~E~G~~~~~ky~~lr~l~~~~ 189 (698)
..||.+|| +||... .-..|.++..+++++.+ .++|+++|++.+.+
T Consensus 560 ~~~~~~~g~~~~~yGG-dfg~~p----~d~~f~~~Glv~~dR~p-k~~~~e~k~~~~~i 612 (1024)
T 1yq2_A 560 IRTRTAEGMEFFAYGG-DFGEVV----HDSNFVMDGMVLSDSTP-TPGLYEFKQIVSPI 612 (1024)
T ss_dssp EEEECTTCCEEEECTT-TTCCSS----CCGGGGCCCSBCTTSCB-CHHHHHHHHHTCSE
T ss_pred ceeECCCCCEEEeecC-ccCCCC----CCCccccCCccCcCccc-CHHHHHHHHhhcce
Confidence 34666777 777542 11237789999999999 69999999876543
No 24
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=95.51 E-value=0.022 Score=66.49 Aligned_cols=66 Identities=20% Similarity=0.294 Sum_probs=50.3
Q ss_pred CCceEEEEEEeCCCCC--CCeEEEeCCCc-eEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeEe
Q 005404 468 QSLKWYKAYFDAPTGN--EPLALDLRSMG-KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 544 (698)
Q Consensus 468 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~g-KG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 544 (698)
.+..|||.+|++|+.. ..++|.+.|.. ...|||||+-+|.-. |.| ... -|-
T Consensus 59 ~g~~wYr~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~--------------~g~-----------~~f-~~d 112 (692)
T 3fn9_A 59 EGAGYYRKTQFFPHDLEGKRVFLRFEGVGACAEVYVNGKLAGTHK--------------GGY-----------SAF-ACE 112 (692)
T ss_dssp CSEEEEEEEEEECGGGTTCEEEEEESCCBSEEEEEETTEEEEEEE--------------CTT-----------SCE-EEE
T ss_pred ceEEEEEEEEEECchhCCCeEEEEECCccEeeEEEECCEEeeeEc--------------CCc-----------ceE-EEE
Confidence 4679999999999642 35899999975 799999999999865 112 222 345
Q ss_pred cCcccccCC-cceEEEE
Q 005404 545 VPRSWLKPT-KNLLVVF 560 (698)
Q Consensus 545 vP~~~Lk~g-~N~ivvf 560 (698)
|+ ++||+| +|+|+|-
T Consensus 113 It-~~l~~G~~N~l~V~ 128 (692)
T 3fn9_A 113 IG-TALKLGAENEIIVK 128 (692)
T ss_dssp CG-GGCCTTEEEEEEEE
T ss_pred Ch-HhcCCCCceEEEEE
Confidence 87 689998 8998874
No 25
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=95.35 E-value=0.035 Score=63.79 Aligned_cols=65 Identities=22% Similarity=0.399 Sum_probs=48.6
Q ss_pred CCceEEEEEEeCCCCC--CCeEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeEe
Q 005404 468 QSLKWYKAYFDAPTGN--EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 544 (698)
Q Consensus 468 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 544 (698)
.+..|||.+|.+|+.. ..++|.+.|. ....|||||+.+|.-+ |.| ... -|-
T Consensus 66 ~G~~wY~~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~--------------~~~-----------~p~-~~d 119 (605)
T 3lpf_A 66 AGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQEVMEHQ--------------GGY-----------TPF-EAD 119 (605)
T ss_dssp CSEEEEEEEEECCTTCSSCEEEEEESCCBSEEEEEESSCEEEEEC--------------CSS-----------SCE-EEE
T ss_pred ceEEEEEEEEECCcccCCCEEEEEECCcceEEEEEECCEEEEEEc--------------CCC-----------Ccc-eee
Confidence 3678999999999653 2589999996 4899999999999876 112 222 344
Q ss_pred cCcccccCCcc-eEEE
Q 005404 545 VPRSWLKPTKN-LLVV 559 (698)
Q Consensus 545 vP~~~Lk~g~N-~ivv 559 (698)
|+ ++|++|+| +|+|
T Consensus 120 it-~~l~~G~nn~l~V 134 (605)
T 3lpf_A 120 VT-PYVIAGKSVRITV 134 (605)
T ss_dssp CG-GGCCTTSEEEEEE
T ss_pred ch-hhccCCCeEEEEE
Confidence 77 68999987 5555
No 26
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=95.24 E-value=0.024 Score=67.73 Aligned_cols=71 Identities=24% Similarity=0.212 Sum_probs=54.1
Q ss_pred EEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCcCeEEEEEee
Q 005404 320 YLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIA 395 (698)
Q Consensus 320 y~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven 395 (698)
-.|||++|.++.. +. .+....|.+.++...+.|||||+++|...+.. ..+.++++-.|+.|.|+|.|.|.|
T Consensus 65 ~~~Yr~~f~~p~~--~~-~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~~~--~~~~~dIt~~l~~G~N~L~V~v~~ 135 (848)
T 2je8_A 65 DWEYRTSFIVSEE--QL-NRDGIQLIFEGLDTYADVYLNGSLLLKADNMF--VGYTLPVKSVLRKGENHLYIYFHS 135 (848)
T ss_dssp CEEEEEEEEECHH--HH-TSSEEEEEESCCBSEEEEEETTEEEEEECBTT--CCEEEECGGGCCSEEEEEEEEEEC
T ss_pred CEEEEEEEEcChh--hc-CCCeEEEEECCCCceeEEEECCEEeccccCCC--CCEEEcChHhhcCCCcEEEEEEeC
Confidence 4599999987532 00 13446899999999999999999999987532 446666654577889999999986
No 27
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=94.86 E-value=0.058 Score=62.64 Aligned_cols=66 Identities=20% Similarity=0.259 Sum_probs=48.8
Q ss_pred CCceEEEEEEeCCCCC--CCeEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeEe
Q 005404 468 QSLKWYKAYFDAPTGN--EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 544 (698)
Q Consensus 468 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 544 (698)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+.+|.-.. | | ... -|-
T Consensus 48 ~g~~wYr~~f~~p~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~-------------~-~-----------~~~-~~d 101 (667)
T 3cmg_A 48 RGIGNYEKALYIRPEWKGKRLFLRFDGVNSIADVFINRKHIGEHRG-------------G-Y-----------GAF-IFE 101 (667)
T ss_dssp CSEEEEEEEEECCGGGTTSEEEEEESCCBSEEEEEETTEEEEEEEC-------------S-S-----------SCE-EEE
T ss_pred ceeEEEEEEEECCcccCCCEEEEEECCccceeEEEECCEEEeeecC-------------C-c-----------ccE-EEE
Confidence 3679999999998632 2489999987 48999999999998761 1 1 121 244
Q ss_pred cCcccccCC-cceEEEE
Q 005404 545 VPRSWLKPT-KNLLVVF 560 (698)
Q Consensus 545 vP~~~Lk~g-~N~ivvf 560 (698)
|.. .|++| +|+|+|-
T Consensus 102 it~-~l~~G~~N~l~V~ 117 (667)
T 3cmg_A 102 ITD-LVKYGEKNSVLVR 117 (667)
T ss_dssp CTT-TSCTTSEEEEEEE
T ss_pred CCH-HHCCCCCcEEEEE
Confidence 665 78888 7988873
No 28
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=94.67 E-value=0.053 Score=64.30 Aligned_cols=66 Identities=23% Similarity=0.503 Sum_probs=49.1
Q ss_pred CCceEEEEEEeCCCCC--CCeEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeEe
Q 005404 468 QSLKWYKAYFDAPTGN--EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 544 (698)
Q Consensus 468 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 544 (698)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+.+|.-- |.| ...+ |-
T Consensus 65 ~g~~wYrk~f~vp~~~~~~~v~L~f~gv~~~a~V~vNG~~vG~~~--------------~g~-----------~pf~-~D 118 (801)
T 3gm8_A 65 AGISWYRKTFTIPSKWKNKKVQILFEGVYLNSEVWINGHWLGKRP--------------NGY-----------ISFV-YD 118 (801)
T ss_dssp CEEEEEEEEEECCSGGGSCEEEEEESCCBSCEEEEETTEEEEEEC--------------CSS-----------CCEE-EE
T ss_pred CceEEEEEEEEcCcccCCCEEEEEECccceEEEEEECCEEeeccc--------------CCc-----------ccEE-EE
Confidence 3578999999998642 3589999996 6899999999999753 112 2222 44
Q ss_pred cCcccccCCcceEEEE
Q 005404 545 VPRSWLKPTKNLLVVF 560 (698)
Q Consensus 545 vP~~~Lk~g~N~ivvf 560 (698)
|+. .||+|+|+|+|-
T Consensus 119 IT~-~Lk~G~N~L~V~ 133 (801)
T 3gm8_A 119 LTP-YLQEGKNQIAVK 133 (801)
T ss_dssp CGG-GCCSSEEEEEEE
T ss_pred CcH-hccCCCcEEEEE
Confidence 765 689999998874
No 29
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=94.42 E-value=0.035 Score=63.84 Aligned_cols=65 Identities=15% Similarity=0.248 Sum_probs=48.0
Q ss_pred CceEEEEEEeCCCC-----CCCeEEEeCCCc-eEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceee
Q 005404 469 SLKWYKAYFDAPTG-----NEPLALDLRSMG-KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRW 542 (698)
Q Consensus 469 ~~~~Yr~~F~~p~~-----~d~~~Ld~~g~g-KG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtl 542 (698)
+..|||.+|.+|+. ...++|.+.|.. ...|||||+-+|.-. |.| ...+
T Consensus 77 G~~wYr~~f~~p~~~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~--------------~g~-----------~~~~- 130 (613)
T 3hn3_A 77 GWVWYEREVILPERWTQDLRTRVVLRIGSAHSYAIVWVNGVDTLEHE--------------GGY-----------LPFE- 130 (613)
T ss_dssp SEEEEEEEECCCHHHHHCTTEEEEEEESCCCSEEEEEETTEEEEEEE--------------SSS-----------SCEE-
T ss_pred eeEEEEEEEEeCchhhhcCCCEEEEEECCcceEEEEEECCEEEeEEc--------------CCc-----------ceEE-
Confidence 56799999999964 235899999875 799999999999876 112 2223
Q ss_pred EecCcccccCCc----ceEEEE
Q 005404 543 YHVPRSWLKPTK----NLLVVF 560 (698)
Q Consensus 543 Y~vP~~~Lk~g~----N~ivvf 560 (698)
|-|+ +.|++|+ |+|+|-
T Consensus 131 ~dit-~~l~~g~~~~~n~l~V~ 151 (613)
T 3hn3_A 131 ADIS-NLVQVGPLPSRLRITIA 151 (613)
T ss_dssp EECH-HHHCCC---CCEEEEEE
T ss_pred EECh-hhhcCCCCCcceEEEEE
Confidence 4476 5889885 888774
No 30
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=94.14 E-value=0.08 Score=64.27 Aligned_cols=66 Identities=18% Similarity=0.320 Sum_probs=49.3
Q ss_pred CCceEEEEEEeCCCCC--CCeEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeEe
Q 005404 468 QSLKWYKAYFDAPTGN--EPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYH 544 (698)
Q Consensus 468 ~~~~~Yr~~F~~p~~~--d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~ 544 (698)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+.+|.-. |.|. |- -|-
T Consensus 125 ~~~~~Yrr~F~vp~~~~g~~v~L~F~gv~~~a~V~vNG~~vG~~~--------------gg~~----------p~--~~D 178 (1010)
T 3bga_A 125 NEVGSYRRTFKVPADWKGRRVVLCCEGVISFYYVWVNGKLLGYNQ--------------GSKT----------AA--EWD 178 (1010)
T ss_dssp CEEEEEEEEEECCGGGTTSEEEEEESCEESEEEEEETTEEEEEEE--------------CSSS----------CE--EEE
T ss_pred CcEEEEEEEeEeCcccCCCEEEEEECCCCceeEEEECCEEEeeEe--------------CCCC----------cc--eee
Confidence 3578999999998642 3489999995 5899999999999775 1121 22 244
Q ss_pred cCcccccCCcceEEEE
Q 005404 545 VPRSWLKPTKNLLVVF 560 (698)
Q Consensus 545 vP~~~Lk~g~N~ivvf 560 (698)
|. +.|++|+|+|+|-
T Consensus 179 IT-~~L~~G~N~L~V~ 193 (1010)
T 3bga_A 179 IT-DVLSEGENVVALE 193 (1010)
T ss_dssp CG-GGCCSSEEEEEEE
T ss_pred hh-hhccCCCcEEEEE
Confidence 66 4789999998873
No 31
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=94.12 E-value=0.06 Score=64.33 Aligned_cols=64 Identities=17% Similarity=0.175 Sum_probs=48.7
Q ss_pred ceEEEEEEeCCCC---CCCeEEEeCCCc-eEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeEec
Q 005404 470 LKWYKAYFDAPTG---NEPLALDLRSMG-KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHV 545 (698)
Q Consensus 470 ~~~Yr~~F~~p~~---~d~~~Ld~~g~g-KG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~v 545 (698)
..|||.+|++|+. ...++|.+.|.. ...|||||+.+|+-+. | | ... -|-|
T Consensus 65 ~~~Yr~~f~~p~~~~~~~~~~L~f~gv~~~a~V~vNG~~vg~~~~-------------~-~-----------~~~-~~dI 118 (848)
T 2je8_A 65 DWEYRTSFIVSEEQLNRDGIQLIFEGLDTYADVYLNGSLLLKADN-------------M-F-----------VGY-TLPV 118 (848)
T ss_dssp CEEEEEEEEECHHHHTSSEEEEEESCCBSEEEEEETTEEEEEECB-------------T-T-----------CCE-EEEC
T ss_pred CEEEEEEEEcChhhcCCCeEEEEECCCCceeEEEECCEEeccccC-------------C-C-----------CCE-EEcC
Confidence 4599999999852 235899999975 8999999999999862 1 1 222 3447
Q ss_pred CcccccCCcceEEEE
Q 005404 546 PRSWLKPTKNLLVVF 560 (698)
Q Consensus 546 P~~~Lk~g~N~ivvf 560 (698)
+. .|++|+|+|+|-
T Consensus 119 t~-~l~~G~N~L~V~ 132 (848)
T 2je8_A 119 KS-VLRKGENHLYIY 132 (848)
T ss_dssp GG-GCCSEEEEEEEE
T ss_pred hH-hhcCCCcEEEEE
Confidence 66 889999998873
No 32
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=93.52 E-value=0.31 Score=58.35 Aligned_cols=40 Identities=25% Similarity=0.507 Sum_probs=31.9
Q ss_pred CceEEEEEEeCCCCCCCeEEEeCC-Cc-eEEEEECCeeeeee
Q 005404 469 SLKWYKAYFDAPTGNEPLALDLRS-MG-KGQVWINGQSIGRY 508 (698)
Q Consensus 469 ~~~~Yr~~F~~p~~~d~~~Ld~~g-~g-KG~vwVNG~nlGRY 508 (698)
+..|||++|+++.....++|.+.| +. --.|||||+-||..
T Consensus 711 G~~wYRG~F~a~~~~~~v~L~~~GG~af~~sVWLNG~flGs~ 752 (1003)
T 3og2_A 711 GTLLFRGRFTARTARQQLFLSTQGGSAFASSVWLNDRFIGSF 752 (1003)
T ss_dssp SCEEEEEEEECSSSSEEEEEEEECSTTCCEEEEETTEEEEEE
T ss_pred CCEEEeeEEECCCCceEEEEEEccccccccEEEECCEEeccc
Confidence 678999999998654457888875 33 56999999999984
No 33
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=92.87 E-value=0.11 Score=63.04 Aligned_cols=65 Identities=17% Similarity=0.291 Sum_probs=48.8
Q ss_pred CCceEEEEEEeCCCC---CCCeEEEeCCC-ceEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeE
Q 005404 468 QSLKWYKAYFDAPTG---NEPLALDLRSM-GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWY 543 (698)
Q Consensus 468 ~~~~~Yr~~F~~p~~---~d~~~Ld~~g~-gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY 543 (698)
.+..|||.+|++|+. ...++|.+.|. ....|||||+-+|.-.. | |. |- -|
T Consensus 118 ~~~g~Yrr~F~vp~~~~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~g-------------g-~~----------p~--~~ 171 (1023)
T 1jz7_A 118 NPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQD-------------S-RL----------PS--EF 171 (1023)
T ss_dssp CCEEEEEEEEEECHHHHHSSEEEEEESCEESEEEEEETTEEEEEEEC-------------T-TS----------CE--EE
T ss_pred CcEEEEEEEEEeCchhcCCCEEEEEECCCCcceEEEECCEEEccccC-------------C-CC----------ce--EE
Confidence 356899999999863 23489999997 48999999999998751 1 11 22 24
Q ss_pred ecCcccccCCcceEEE
Q 005404 544 HVPRSWLKPTKNLLVV 559 (698)
Q Consensus 544 ~vP~~~Lk~g~N~ivv 559 (698)
-|.. .|++|+|+|+|
T Consensus 172 DIT~-~L~~G~N~L~V 186 (1023)
T 1jz7_A 172 DLSA-FLRAGENRLAV 186 (1023)
T ss_dssp ECTT-TCCSEEEEEEE
T ss_pred ecHh-hccCCCcEEEE
Confidence 4665 78889999887
No 34
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=92.86 E-value=0.28 Score=59.11 Aligned_cols=75 Identities=21% Similarity=0.278 Sum_probs=50.2
Q ss_pred CccEEEEEEEeecCCCcccccCCCC--ceeeeCCcc-----eEEEEEECCEEEEEEEccccccceEEeecc-cc-cCCcC
Q 005404 317 TSDYLWYMTSVEISSSESFLRGGQK--PTLTVESAG-----HAVHVFINGQFLGSAFGTRENRRFTFSGPA-NL-RAGIN 387 (698)
Q Consensus 317 ~~Gy~~Y~t~i~~~~~~~~l~~g~~--~~L~v~~~~-----D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~-~l-~~g~~ 387 (698)
.-|.+||||+|+++... |.. ..|.+..+. |+.+|||||+.+|...... ...-.+.+|- .| +.|+|
T Consensus 849 ~~Gv~wyr~~f~L~~p~-----g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~-~pqr~y~VP~giLn~~G~N 922 (971)
T 1tg7_A 849 KPGIRFYSTSFDLDLPS-----GYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNI-GPQTSFPVPEGILNYHGTN 922 (971)
T ss_dssp SSEEEEEEEEEECCCCT-----TEECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETTT-CSCCEEEECBTTBCTTSEE
T ss_pred CCceEEEEEEEeccCCC-----CCCceEEEEcCCCCCCCccceEEEEECCEEEeeecCCC-CCCEEEECCHHHhCcCCcc
Confidence 35899999999844221 111 345556666 9999999999999886221 1223344443 36 78899
Q ss_pred eEEEEEeecC
Q 005404 388 KIALLSIAVG 397 (698)
Q Consensus 388 ~L~ILven~G 397 (698)
+|.|-|-++.
T Consensus 923 ~i~vrv~~~~ 932 (971)
T 1tg7_A 923 WLALSLWAQE 932 (971)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEecCC
Confidence 9999666665
No 35
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=92.78 E-value=0.093 Score=63.81 Aligned_cols=66 Identities=18% Similarity=0.294 Sum_probs=49.2
Q ss_pred CCceEEEEEEeCCCCC---CCeEEEeCCCc-eEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeE
Q 005404 468 QSLKWYKAYFDAPTGN---EPLALDLRSMG-KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWY 543 (698)
Q Consensus 468 ~~~~~Yr~~F~~p~~~---d~~~Ld~~g~g-KG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY 543 (698)
.+..|||.+|++|+.. ..++|.+.|.. ...|||||+-+|.-- |.|. |- -|
T Consensus 111 n~~g~Yrr~f~vp~~~~~~~~v~L~F~gv~~~a~V~vNG~~vG~~~--------------gg~~----------p~--~~ 164 (1032)
T 3oba_A 111 NPTGVYARTFELDSKSIESFEHRLRFEGVDNCYELYVNGQYVGFNK--------------GSRN----------GA--EF 164 (1032)
T ss_dssp CCEEEEEEEEEECHHHHHHEEEEEEESCEESEEEEEETTEEEEEEE--------------CTTS----------CE--EE
T ss_pred CCeEEEEEEEEECchhcCCCEEEEEECCcceeEEEEECCEEEEEEe--------------CCcc----------cE--EE
Confidence 4678999999999642 35899999974 799999999999754 2121 22 24
Q ss_pred ecCcccccCCcceEEEE
Q 005404 544 HVPRSWLKPTKNLLVVF 560 (698)
Q Consensus 544 ~vP~~~Lk~g~N~ivvf 560 (698)
-|+. .||.|+|+|+|-
T Consensus 165 DIT~-~lk~G~N~L~V~ 180 (1032)
T 3oba_A 165 DIQK-YVSEGENLVVVK 180 (1032)
T ss_dssp ECTT-TCCSEEEEEEEE
T ss_pred EChh-hccCCcEEEEEE
Confidence 4765 788889998874
No 36
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=90.27 E-value=0.4 Score=58.41 Aligned_cols=68 Identities=16% Similarity=0.307 Sum_probs=47.0
Q ss_pred CceEEEEEEeCCCCCCCeEEEeCCCc-eEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeEecCc
Q 005404 469 SLKWYKAYFDAPTGNEPLALDLRSMG-KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPR 547 (698)
Q Consensus 469 ~~~~Yr~~F~~p~~~d~~~Ld~~g~g-KG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~vP~ 547 (698)
+..|||.+|+++.....++|.+.|.. ...|||||+.+|.+=.. .|.| -.. -|-|..
T Consensus 119 ~~~wYrr~f~v~~~~~~v~L~F~gvd~~a~V~vNG~~vg~~~~h-----------~g~~-----------~~~-~~DIt~ 175 (1032)
T 2vzs_A 119 VPWWYRTDLNVDDTSSRTYLDFSGVLSKADVWVNGTKVATKDQV-----------NGAY-----------TRH-DLDITA 175 (1032)
T ss_dssp SCEEEEEEEEESCCSSEEEEEECCEESBEEEEETTEEEECTTTS-----------BSTT-----------CCE-EEECTT
T ss_pred ccEEEEEEEEEeCCCCEEEEEECCcccceEEEECCEEecccccc-----------cCcc-----------eeE-EEECcH
Confidence 56899999999222235899999975 89999999999865100 1212 122 244665
Q ss_pred ccccCCcceEEEE
Q 005404 548 SWLKPTKNLLVVF 560 (698)
Q Consensus 548 ~~Lk~g~N~ivvf 560 (698)
.|++|+|+|+|-
T Consensus 176 -~l~~G~N~L~V~ 187 (1032)
T 2vzs_A 176 -QVHTGVNSVAFK 187 (1032)
T ss_dssp -TCCSEEEEEEEE
T ss_pred -HhCCCCcEEEEE
Confidence 788899998884
No 37
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=80.70 E-value=13 Score=44.88 Aligned_cols=107 Identities=19% Similarity=0.255 Sum_probs=64.2
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEcccccc---ceEEeecccccCC-cCeEEEEE
Q 005404 318 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENR---RFTFSGPANLRAG-INKIALLS 393 (698)
Q Consensus 318 ~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~---~~~~~~~~~l~~g-~~~L~ILv 393 (698)
.+..+||++|.+.+... ....|.|... ....+||||+.||.-.+....+ -.++++.-.|+.| .|+|.|++
T Consensus 21 ~~~~~fRk~f~~~~~~~-----~~a~l~i~a~-g~y~~~iNG~~vg~~p~~~~~~~~~y~~~Dvt~~L~~G~~N~i~v~~ 94 (956)
T 2okx_A 21 NEWRCFRGSFDAPASVE-----GPAMLHITAD-SRYVLFVNGEQVGRGPVRSWPKEQFYDSYDIGGQLRPGVRNTIAVLV 94 (956)
T ss_dssp TEEEEEEEEEECCSCCS-----SCCEEEEEEE-SEEEEEETTEEEEEECCCCBTTEEEEEEEECTTTCCTTSEEEEEEEE
T ss_pred CccceeEEEEECCCCcc-----CceEEEEEec-CcEEEEECCEECCCCCCccccccccceEEechhhcCCCCCcEEEEEE
Confidence 47789999998753210 1245665543 4448999999999854311111 1344444457889 99999999
Q ss_pred eecCCcccccCCCccccceeecEEEccccCCCccCccCCcEE
Q 005404 394 IAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSY 435 (698)
Q Consensus 394 en~Gr~N~g~~~~~~~kGI~g~V~l~g~~~~~~~l~~~~W~~ 435 (698)
-+.|+.++.. + ..+-|++..+.-+|.. ...+...|+.
T Consensus 95 ~~~g~~~~~~-~-~~~~~l~~~l~~dg~~---~i~tD~sWk~ 131 (956)
T 2okx_A 95 LHFGVSNFYY-L-RGRGGLIAEIEADGRT---LAATDAAWRT 131 (956)
T ss_dssp EECCSCBTTB-C-CCCCEEEEEEEETTEE---EEECSTTSEE
T ss_pred EecCcccccc-c-CCCceEEEEEecCCcE---EEecCCCcee
Confidence 9999887643 2 2345565433323311 1123457985
No 38
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp}
Probab=76.83 E-value=12 Score=40.97 Aligned_cols=227 Identities=15% Similarity=0.188 Sum_probs=112.7
Q ss_pred HHHHHHHHHhccCceeccCCcEEEEEeccccCCc-cc---cCC-CCcHHHHH-HHHHHHHhCCC-CcceEeecCCCC--C
Q 005404 4 FTQKIVQMMKNEKLFASQGGPIILSQIENEYGPE-SK---SLG-AAGHAYVN-WAAKMAVGLDT-GVPWVMCKEDDA--P 74 (698)
Q Consensus 4 ~~~~i~~~l~~~~l~~~~GGPII~vQvENEYG~~-~~---~~g-~~d~~Ym~-~L~~~a~~~Gi-~vp~~~~~~~~~--~ 74 (698)
|-+.+++.|+ -+ -+.|=||=+|-+-||=... .+ .+. +.-.++++ .|+..+++.|+ ++.++..+.... +
T Consensus 170 yA~Ylvk~i~--~y-~~~Gi~i~~is~qNEP~~~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~kI~~~D~n~~~~~ 246 (447)
T 2wnw_A 170 WADIIINYLL--EY-RRHGINVQALSVQNEPVAVKTWDSCLYSVEEETAFAVQYLRPRLARQGMDEMEIYIWDHDKDGLV 246 (447)
T ss_dssp HHHHHHHHHH--HH-HHTTCCCCEEESCSSTTCCCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCEEEEEEEEGGGHH
T ss_pred HHHHHHHHHH--HH-HHcCCCeeEEeeeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEEeCCCccchh
Confidence 3344444444 22 2567788899889994321 00 011 11256676 78888888899 677777665321 1
Q ss_pred ---Ccccc------CCCC--cc--ccc-------CCCCCCCCCceeeeccCccccccCCCcCC-CCHHHHHHHHHHHHHc
Q 005404 75 ---DPVIN------SCNG--FY--CDA-------FSPNKPYKPTLWTEAWSGWFTEFGGAVHR-RPVQDLAFAVARFIQK 133 (698)
Q Consensus 75 ---~~v~~------~~ng--~~--~~~-------f~~~~p~~P~~~~E~~~Gwf~~wG~~~~~-~~~~~~~~~~~~~l~~ 133 (698)
..++. ...+ ++ ... +....|+++++.+|...+ .|.+.... .+-..++..+..-+..
T Consensus 247 ~~~~~il~d~~a~~~v~~ia~H~Y~g~~~~~l~~~~~~~p~k~lw~TE~~~~---~~~~~~~~~g~w~~~a~~ii~~~~~ 323 (447)
T 2wnw_A 247 DWAELAFADEANYKGINGLAFHWYTGDHFSQIQYLAQCLPDKKLLFSEGCVP---MESDAGSQIRHWHTYLHDMIGNFKS 323 (447)
T ss_dssp HHHHHHTTSHHHHHHCCEEEEECTTCCCHHHHHHHHHHCTTSEEEEEECCCB---CCCSTTHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHhcCHhHHhhCCEEEEEccCCCcHHHHHHHHHHCCCCeEEEeccccC---CcccCCCCCCcHHHHHHHHHHHHhc
Confidence 11121 0111 11 111 112358999999998754 12111000 0113334443333566
Q ss_pred CCceeeeeEee----ccCCC-CCCCCCCcccccccCCCCC---CCCCCC-CchhHHHHHHHHHHHHhhhccccCCCCccc
Q 005404 134 GGSFFNYYMYH----GGTNF-GRTAGGPFITTSYDYDAPL---DEYGLM-RQPKYGHLKQLHEAIKLCEYALVSSDPTVT 204 (698)
Q Consensus 134 g~s~~n~YMfh----GGTNf-G~~~G~~~~~TSYDY~APl---~E~G~~-~~~ky~~lr~l~~~~~~~~~~l~~~~p~~~ 204 (698)
+++..-+.... ||.|+ |.+. +++| .+.|.+ .++.|+.+..+.+|++.-...+.. .
T Consensus 324 ~~~~~~~Wnl~ld~~ggpn~~g~~~-----------~g~i~vd~~~g~~~~~~~yy~~~hfSkfirPGa~rI~~-~---- 387 (447)
T 2wnw_A 324 GCSGFIDWNLLLNSEGGPNHQGNLC-----------EAPIQYDAQNDVLRRNHSWYGIGHFCRYVRPGARVMLS-S---- 387 (447)
T ss_dssp TCCEEEEEESEEETTSCCCTTCCCB-----------CCSEEEETTTTEEEECHHHHHHHHHHTTCCTTCEEEEE-E----
T ss_pred CCEEEEEhhhhhCcCCCCccCCCCc-----------CccEEEeCCCCeEEEChHHHHHHHHHhhcCCCCEEEEe-e----
Confidence 76643333333 77664 3221 2344 223433 268999999998887642222210 0
Q ss_pred CCCCcceeeeeecCCcceeeEeeccCC-ccceEEEeCCe--eeecCCCcee
Q 005404 205 SLGTYQQAHVFSAGQQKCAAFLSNYNT-KSAARVTFNGR--QYNLPPWSIS 252 (698)
Q Consensus 205 ~~~~~~~~~~y~~~~~~~~~Fl~n~~~-~~~~~v~~~~~--~~~~p~~sv~ 252 (698)
.........+|...++.-++=+.|... ....+|.+.+. .+.||+.||.
T Consensus 388 ~~~~~l~~~Af~~pdg~~vvVv~N~~~~~~~~~~~~~g~~~~~~lpa~Sv~ 438 (447)
T 2wnw_A 388 SYDNLLEEVGFVNPDGERVLVVYNRDVQERRCRVLDGDKEIALTLPPSGAS 438 (447)
T ss_dssp ESCTTEEEEEEECTTSCEEEEEEECSSSCEEEEEEETTEEEEEEECTTCEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEEeCCCCCEEEEEEECCcEEEEEECCCeEE
Confidence 011223445565555555555566443 33445666554 5678887764
No 39
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=75.94 E-value=4.7 Score=48.58 Aligned_cols=41 Identities=24% Similarity=0.525 Sum_probs=33.0
Q ss_pred CceEEEEEEeCCCCC-CCeEEEeCCCceEEEEECCeeeeeeee
Q 005404 469 SLKWYKAYFDAPTGN-EPLALDLRSMGKGQVWINGQSIGRYWM 510 (698)
Q Consensus 469 ~~~~Yr~~F~~p~~~-d~~~Ld~~g~gKG~vwVNG~nlGRYW~ 510 (698)
+..|||.+|++++.. ..-.|-+++.|.=.+||||+.+|+ +|
T Consensus 22 ~~~~fRk~f~~~~~~~~~a~l~i~a~g~y~~~iNG~~vg~-~p 63 (956)
T 2okx_A 22 EWRCFRGSFDAPASVEGPAMLHITADSRYVLFVNGEQVGR-GP 63 (956)
T ss_dssp EEEEEEEEEECCSCCSSCCEEEEEEESEEEEEETTEEEEE-EC
T ss_pred ccceeEEEEECCCCccCceEEEEEecCcEEEEECCEECCC-CC
Confidence 467999999998755 334577777788899999999998 54
No 40
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=75.33 E-value=2.9 Score=45.11 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=30.6
Q ss_pred ceeccCCcEEEEEeccccCCccccCCCCcHHHHHHHHHHHHhCCCCcceE
Q 005404 17 LFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWV 66 (698)
Q Consensus 17 l~~~~GGPII~vQvENEYG~~~~~~g~~d~~Ym~~L~~~a~~~Gi~vp~~ 66 (698)
+++++...||+.||.||++.....-+..-.+|++.+.+.+|+..-..|++
T Consensus 172 ~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~~~~~~~IR~~Dp~~lVt 221 (383)
T 3pzg_A 172 VPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVA 221 (383)
T ss_dssp CBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred cccCCCCcEEEEEecCCCCcccCccHHHHHHHHHHHHHHHHhhCCCceEE
Confidence 35788889999999999986421001112345555566666655555543
No 41
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=69.45 E-value=5.6 Score=46.48 Aligned_cols=38 Identities=8% Similarity=0.005 Sum_probs=31.8
Q ss_pred CCceEEEEEEeCCCCCCCeEEEeCCCceEEEEECCeeeeee
Q 005404 468 QSLKWYKAYFDAPTGNEPLALDLRSMGKGQVWINGQSIGRY 508 (698)
Q Consensus 468 ~~~~~Yr~~F~~p~~~d~~~Ld~~g~gKG~vwVNG~nlGRY 508 (698)
.+..+||.+|++++. .-|-+++.|.=.++|||+.+|.|
T Consensus 56 ~~~~~~rk~f~~~~~---a~l~i~a~G~ye~~iNG~~vg~y 93 (739)
T 3cih_A 56 YVVVEFSKVLNLSEP---EEVFIAAEGTYNVKLDGKLQFGM 93 (739)
T ss_dssp CSEEEEEEEEEESSC---EEEEEEEESEEEEEETTEECSSC
T ss_pred CcceeEEEEEEcCCC---cEEEEEEcCcEEEEECCEEccCC
Confidence 356899999999764 34667799999999999999976
No 42
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=65.48 E-value=14 Score=42.35 Aligned_cols=69 Identities=17% Similarity=0.294 Sum_probs=46.3
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeeccc-ccCCcCeEEEEEeec
Q 005404 318 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPAN-LRAGINKIALLSIAV 396 (698)
Q Consensus 318 ~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~-l~~g~~~L~ILven~ 396 (698)
.+-.||+++|+++.. .+..|.+.+. -...|||||.-+|......-....- +|.. |++|.|.|.| .|-.
T Consensus 506 ~~p~~yk~~f~~~~~-------~Dt~Ld~~g~-gKG~vwVNG~nlGRYW~~GPqqtlY--vP~~~Lk~g~N~ivv-fE~~ 574 (612)
T 3d3a_A 506 NQPAYYRSTFNLNEL-------GDTFLNMMNW-SKGMVWVNGHAIGRYWEIGPQQTLY--VPGCWLKKGENEIII-LDMA 574 (612)
T ss_dssp CCCEEEEEEEEESSC-------CBEEEECTTC-CEEEEEETTEEEEEEETTCSCCEEE--ECGGGCCSEEEEEEE-EESS
T ss_pred CCCEEEEEEEECCCC-------CcEEEecCCC-CcEEEEECCEeEEeEEecCCEEEEE--ecHHHcCCCCcEEEE-EEEc
Confidence 378999999987522 2356777775 4678999999999987543222233 4543 6778887754 5555
Q ss_pred C
Q 005404 397 G 397 (698)
Q Consensus 397 G 397 (698)
|
T Consensus 575 ~ 575 (612)
T 3d3a_A 575 G 575 (612)
T ss_dssp C
T ss_pred C
Confidence 4
No 43
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=53.96 E-value=66 Score=33.62 Aligned_cols=47 Identities=17% Similarity=0.006 Sum_probs=32.3
Q ss_pred cCCcEEEEEeccccCCccccCCCC----cHHHHHHHHHHHHhCCCCcceEe
Q 005404 21 QGGPIILSQIENEYGPESKSLGAA----GHAYVNWAAKMAVGLDTGVPWVM 67 (698)
Q Consensus 21 ~GGPII~vQvENEYG~~~~~~g~~----d~~Ym~~L~~~a~~~Gi~vp~~~ 67 (698)
+--.||+++|=||-.......+.. -++|++.+.+.+|+.+-+.+++.
T Consensus 177 ~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v 227 (359)
T 4hty_A 177 GINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALV 227 (359)
T ss_dssp TCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 345799999999976432111111 27899999999999888775544
No 44
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=49.25 E-value=38 Score=38.42 Aligned_cols=71 Identities=20% Similarity=0.321 Sum_probs=45.6
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCcCeEEEEEeec
Q 005404 317 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAV 396 (698)
Q Consensus 317 ~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~ 396 (698)
..+=.+|+.++++... .+..|.+.+-. ...|||||.-+|......-+.++-++.+ -|++|.|+|.| .|-.
T Consensus 503 ~~~P~fy~g~f~~~~~-------~DTfLd~~gwg-KG~v~VNG~nLGRYW~~GPQ~tLYvP~~-~Lk~G~NeIvv-fEl~ 572 (595)
T 4e8d_A 503 QGQPAFYAYDFTVEEP-------KDTYLDLSEFG-KGVAFVNGQNLGRFWNVGPTLSLYIPHS-YLKEGANRIII-FETE 572 (595)
T ss_dssp TTSCEEEEEEEEESSC-------CBEEEECTTCC-EEEEEETTEEEEEEETTCSBCEEEECGG-GSCSEEEEEEE-EESS
T ss_pred CCCCeEEEEEEEcCCC-------CCEEEeCCCCc-eEEEEECCeeeecccCCCCeEEEEecHH-HhCcCCceEEE-EEec
Confidence 3567899999987432 13467776554 4589999999999875332233333333 26788888855 4443
Q ss_pred C
Q 005404 397 G 397 (698)
Q Consensus 397 G 397 (698)
|
T Consensus 573 ~ 573 (595)
T 4e8d_A 573 G 573 (595)
T ss_dssp S
T ss_pred C
Confidence 4
No 45
>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ...
Probab=48.94 E-value=31 Score=38.30 Aligned_cols=219 Identities=15% Similarity=0.083 Sum_probs=108.5
Q ss_pred ccCCcEEEEEeccccCCccc---cCCC------CcHHHHH-HHHHHHHhCCC-CcceEeecCCC--CC---Ccccc----
Q 005404 20 SQGGPIILSQIENEYGPESK---SLGA------AGHAYVN-WAAKMAVGLDT-GVPWVMCKEDD--AP---DPVIN---- 79 (698)
Q Consensus 20 ~~GGPII~vQvENEYG~~~~---~~g~------~d~~Ym~-~L~~~a~~~Gi-~vp~~~~~~~~--~~---~~v~~---- 79 (698)
+.|=||=+|=+-||=....+ .|.. .-+++++ .|+..+++.|+ ++.++.++... .+ ..++.
T Consensus 222 ~~Gi~i~~is~qNEP~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L~~~gl~~~kI~~~D~n~~~~~~~~~~~l~d~~a 301 (497)
T 2nt0_A 222 EHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEA 301 (497)
T ss_dssp HTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHHTSTTTTSEEEEEEEEGGGTTHHHHHHHTSHHH
T ss_pred HcCCCeeEEeeccCCCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhcCCCCceEEEecCCCCcchhHHHHHhcChhh
Confidence 45668888888898322100 1111 1256777 78888888898 77777777531 22 11111
Q ss_pred --CCCC--ccc--cc----------CCCCCCCCCceeeeccCcc--ccccCCCcCCCCHHHHHHHHHHHHHcCCceeeee
Q 005404 80 --SCNG--FYC--DA----------FSPNKPYKPTLWTEAWSGW--FTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYY 141 (698)
Q Consensus 80 --~~ng--~~~--~~----------f~~~~p~~P~~~~E~~~Gw--f~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~Y 141 (698)
...+ +++ .. +....|+++++.+|...|. ++.+........+..++..+..-|..+++..-+.
T Consensus 302 ~~~v~~ia~H~Y~~~~~~~~~~l~~~~~~~p~k~lw~TE~~~~~~~~~~~~~~~~w~~a~~~a~~ii~~l~~~~~~~~~W 381 (497)
T 2nt0_A 302 AKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDW 381 (497)
T ss_dssp HTTCCEEEEEEETTSCCCHHHHHHHHHHHCTTSEEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred HhhcceEEEEecCCCCCChHHHHHHHHHHCCCCcEEEecccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhhcceeeEee
Confidence 1111 111 10 1133588999999997663 1111111111234556665555566665432121
Q ss_pred Ee----eccCCCCCCCCCCcccccccCCCCCC---CCCCC-CchhHHHHHHHHHHHHhhhccccCCCCcccCCCCcceee
Q 005404 142 MY----HGGTNFGRTAGGPFITTSYDYDAPLD---EYGLM-RQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAH 213 (698)
Q Consensus 142 Mf----hGGTNfG~~~G~~~~~TSYDY~APl~---E~G~~-~~~ky~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~~ 213 (698)
.. .||.|++.. . -++||. +.|.+ .+++|+.|..+.+|++.-...+.. ...........
T Consensus 382 nl~ld~~ggp~~~~n-~---------~~~~i~v~~~~g~~~~~~~yY~~~hfSkfirPGa~rI~~----~~~~~~~l~~~ 447 (497)
T 2nt0_A 382 NLALNPEGGPNWVRN-F---------VDSPIIVDITKDTFYKQPMFYHLGHFSKFIPEGSQRVGL----VASQKNDLDAV 447 (497)
T ss_dssp ESEECTTSCCCSSCC-C---------CCCSEEEEGGGTEEEECHHHHHHHHHHTTCCTTCEEEEE----EESSCCSEEEE
T ss_pred eeeecCCCCCCCCCC-c---------cCceEEEeCCCCeEEECHHHHHHHhhhcccCCCCEEEEe----ccCCCCceEEE
Confidence 11 377777531 1 122221 12332 157899999988887632222110 00001123445
Q ss_pred eeecCCcceeeEeeccCCc-cceEEEeC-C--eeeecCCCcee
Q 005404 214 VFSAGQQKCAAFLSNYNTK-SAARVTFN-G--RQYNLPPWSIS 252 (698)
Q Consensus 214 ~y~~~~~~~~~Fl~n~~~~-~~~~v~~~-~--~~~~~p~~sv~ 252 (698)
+|...++.-++=+.|.... ...+|.+. + ..+.||+.||.
T Consensus 448 Af~npdg~~vvV~~N~~~~~~~~~v~~~~~~~~~~~lpa~Sv~ 490 (497)
T 2nt0_A 448 ALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIH 490 (497)
T ss_dssp EEECTTSCEEEEEEECSSSCEEEEEEETTTEEEEEEECTTEEE
T ss_pred EEECCCCCEEEEEEeCCCCCEEEEEEeCCCCEEEEEECCCeEE
Confidence 5655555555555664433 23445543 2 35677877764
No 46
>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A*
Probab=46.52 E-value=80 Score=33.50 Aligned_cols=110 Identities=12% Similarity=0.065 Sum_probs=61.0
Q ss_pred CCCCCceeeeccCcc---ccccCCCcCCCCHHHHHHHHHHHHHcCCceeeeeEeeccCCCCCCCCCCcccccccCCCCCC
Q 005404 93 KPYKPTLWTEAWSGW---FTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLD 169 (698)
Q Consensus 93 ~p~~P~~~~E~~~Gw---f~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YMfhGGTNfG~~~G~~~~~TSYDY~APl~ 169 (698)
.++++++.+|...+- ...| ..+.+++..+...|..+.+ -|++ |+. ..+ ..||+
T Consensus 214 ~~~k~lw~TE~~~~~~~~~~~w------~~~~~~a~~i~~~l~~~~~---~~~~--------W~~----~~~---~Gli~ 269 (383)
T 2y24_A 214 NAGKQLWMTEHYVDSKQSANNW------TSAIEVGTELNASMVSNYS---AYVW--------WYI----RRS---YGLLT 269 (383)
T ss_dssp HTTCEEEEEEECSCTTSCTTCH------HHHHHHHHHHHHHHHTTCS---EEEE--------EES----BST---TSSBC
T ss_pred cCCCeEEEeccccCCCcccCch------hHHHHHHHHHHHHHhcCcc---EEEE--------eec----cCC---CCeec
Confidence 357899999987531 1112 1345666666565665544 3554 321 111 23889
Q ss_pred CCCCCCchhHHHHHHHHHHHHhhhccccCCCCcccCCCCcceeeeeecCCcceeeEeeccCC
Q 005404 170 EYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNT 231 (698)
Q Consensus 170 E~G~~~~~ky~~lr~l~~~~~~~~~~l~~~~p~~~~~~~~~~~~~y~~~~~~~~~Fl~n~~~ 231 (698)
+.|.+ ++.|+.|..+.+|++.-...+.... .........+|...++.-++=+.|...
T Consensus 270 ~~G~~-~~~~y~~~hfSkfirPG~~ri~~~~----~~~~~l~~~Af~~pdg~~vvV~~N~~~ 326 (383)
T 2y24_A 270 EDGKV-SKRGYVMSQYARFVRPGALRIQATE----NPQSNVHLTAYKNTDGKMVIVAVNTND 326 (383)
T ss_dssp TTSCB-CHHHHHHHHHHTTSCTTCEEEEECS----CSBTTEEEEEEECTTCCEEEEEEECSS
T ss_pred CCCeE-eeHHHHHHHHhcccCCCCEEEEecC----CCCCceEEEEEECCCCCEEEEEEeCCC
Confidence 99999 6899999999888764322221100 001223445565555555555566543
No 47
>4g6v_B CDII; tRNAse, toxin, immunity; 2.64A {Burkholderia pseudomallei 1026A}
Probab=42.27 E-value=6.8 Score=33.41 Aligned_cols=28 Identities=29% Similarity=0.705 Sum_probs=20.6
Q ss_pred HHHHHHHhccCceec--cCCcEEEEEeccccCC
Q 005404 6 QKIVQMMKNEKLFAS--QGGPIILSQIENEYGP 36 (698)
Q Consensus 6 ~~i~~~l~~~~l~~~--~GGPII~vQvENEYG~ 36 (698)
+.++|++. +.++. |||-|+..| +|||-.
T Consensus 72 ~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~ 101 (111)
T 4g6v_B 72 ADLIPIVS--KILVDGFNGGAILILQ-DNEYRR 101 (111)
T ss_dssp GGGHHHHH--HHHHHTTTTSCEEEEE-TTTEEC
T ss_pred chhhhhhH--HheecccCCceEEEEe-cchhhh
Confidence 34677777 55553 899998888 999964
No 48
>3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis}
Probab=39.71 E-value=4.1e+02 Score=29.10 Aligned_cols=62 Identities=13% Similarity=-0.018 Sum_probs=39.5
Q ss_pred HHHHHHHHHhccCceeccCCcEEEEEecccc--CCc-cccCCC------CcHHHHHHHHHHHHhCCCCcceEee
Q 005404 4 FTQKIVQMMKNEKLFASQGGPIILSQIENEY--GPE-SKSLGA------AGHAYVNWAAKMAVGLDTGVPWVMC 68 (698)
Q Consensus 4 ~~~~i~~~l~~~~l~~~~GGPII~vQvENEY--G~~-~~~~g~------~d~~Ym~~L~~~a~~~Gi~vp~~~~ 68 (698)
|-+.+++.|+ -+. +.|=||=+|-+-||= ... ...|.. .-.++++.|+..+++.|+++.++.+
T Consensus 160 yA~Ylvk~i~--~y~-~~Gi~i~~is~qNEP~~~~~~~~~~es~~~t~~~~a~fik~L~p~l~~~g~~~kI~~~ 230 (507)
T 3clw_A 160 FARFLVKSAQ--HFR-EQGFHVNYISPNNEPNGQWHANSFQEGSFATKADLYRMVEELDKAISEAQIDTKILIP 230 (507)
T ss_dssp HHHHHHHHHH--HHH-HTTCCEEEEECCSCTTSCGGGCCSSCCCCCCHHHHHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHH--HHH-HcCCceeEeeeecCCccccccCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 4444555555 333 778899888888885 210 001111 1267888888888889998877766
No 49
>3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A*
Probab=37.98 E-value=1.2e+02 Score=32.44 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=51.7
Q ss_pred CCCCCceeeeccCccccccCCCcCCCCHHHHHHHHHHHHHcCCceeeeeEeeccCCCCCCCCCCcccccccCCCCCCCCC
Q 005404 93 KPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYG 172 (698)
Q Consensus 93 ~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YMfhGGTNfG~~~G~~~~~TSYDY~APl~E~G 172 (698)
.|+++++.||...|+.+..+.. ....+..++..+...|..+. ++-|++ |+. ..+| .|+.++|
T Consensus 220 ~~~K~lw~TE~~~~~~~~~~~~-~w~~al~~a~~I~~~l~~~~--~~a~v~--------Wnl----~~~~---Gp~~~~G 281 (401)
T 3kl0_A 220 GAGKDLWMTEVYYPNSDTNSAD-RWPEALDVSQHIHNAMVEGD--FQAYVW--------WYI----RRSY---GPMKEDG 281 (401)
T ss_dssp CTTCEEEEEEECCSCCCTTCTT-CTTTTHHHHHHHHHHHHTSC--CSEEEE--------EES----BSTT---SSBCTTS
T ss_pred CCCCeEEEEecccCCCCCcccc-chhHHHHHHHHHHHHHHhcc--CcEEEE--------ccc----ccCC---CCccCCC
Confidence 4789999999988765533221 22345677777766665432 123443 331 2333 3888899
Q ss_pred CCCchhHHHHHHHHHHHHh
Q 005404 173 LMRQPKYGHLKQLHEAIKL 191 (698)
Q Consensus 173 ~~~~~ky~~lr~l~~~~~~ 191 (698)
.+ +++|+.|....+|+++
T Consensus 282 ~~-~~~~y~l~hfSrfIrP 299 (401)
T 3kl0_A 282 TI-SKRGYNMAHFSKFVRP 299 (401)
T ss_dssp SB-CHHHHHHHHHHTTSCT
T ss_pred eE-chHHHHHHHhhcccCC
Confidence 99 7999999998888763
No 50
>4esn_A Hypothetical protein; protein of PF07009 family, DUF1312, structural genomics, JOI for structural genomics, JCSG; HET: PE4; 2.20A {Ruminococcus gnavus}
Probab=34.02 E-value=1.7e+02 Score=25.37 Aligned_cols=75 Identities=20% Similarity=0.326 Sum_probs=47.6
Q ss_pred ceEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeEecCcccccCCcceEEEEEeeCCCCcceEEE
Q 005404 494 GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLKPTKNLLVVFEELGGDASRISLV 573 (698)
Q Consensus 494 gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~vP~~~Lk~g~N~ivvfE~~g~~~~~i~~~ 573 (698)
.+.+|++||.-++||= + . . . +++. |+ |.|.| |-+++ .|++.
T Consensus 18 ~~avI~vdGk~~~~i~--L-~---------~-------------~-~~i~-i~------g~n~I---eI~dg---~vrv~ 58 (104)
T 4esn_A 18 QGAVVTVDGEVYGTYS--L-A---------K-------------D-QTIE-IQ------DGNRL---RIQNG---QAKME 58 (104)
T ss_dssp CEEEEEETTEEEEEEE--T-T---------S-------------C-EEEE-ET------TTEEE---EEETT---EEEEE
T ss_pred CEEEEEECCEEEEEEE--C-C---------C-------------C-cEEE-EC------CcEEE---EEECC---EEEEE
Confidence 4688999999999994 2 1 1 3 3443 77 45544 33333 47776
Q ss_pred ee-cccccccccccCCCCCCCcccccCCCCCcCCCCceeeecCCCCeEeeeee
Q 005404 574 KR-SVARVCADAHEHHPTTDNNDIENKGNSNSTGNAKVLLQCAPGQSITSIEF 625 (698)
Q Consensus 574 ~~-~~~~~~~~~~e~hp~~~~~~~~~~~~~~~ce~~~~~L~C~~g~~Is~I~~ 625 (698)
.. -.+++|.+. .|..+.++ .+-|-+.+++..|..
T Consensus 59 es~CPdkiCv~~---------GwIs~~Gq---------~IVCLPnklvI~I~g 93 (104)
T 4esn_A 59 WADCPDQLCVHQ---------KAISRTGE---------SIICLPNQVVVSVQG 93 (104)
T ss_dssp EECCSSCHHHHS---------CCBCSTTC---------EEEETTTTEEEEEEC
T ss_pred ECCCCCcchhhC---------CCcCCCCC---------EEEEcCCEEEEEEEe
Confidence 65 367888876 56665555 577877666545653
No 51
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=33.68 E-value=1.2e+02 Score=31.79 Aligned_cols=41 Identities=7% Similarity=-0.159 Sum_probs=30.6
Q ss_pred cCCcEEEEEeccccCCccccCCCCcHHHHHHHHHHHHhCCCCcceEe
Q 005404 21 QGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVM 67 (698)
Q Consensus 21 ~GGPII~vQvENEYG~~~~~~g~~d~~Ym~~L~~~a~~~Gi~vp~~~ 67 (698)
+++.|+|+||=||.-.. ....+|++.|.+.+|+.--+ |+..
T Consensus 162 ~~~~V~~~~IGNE~~~~-----~~~~~~~~~Li~~vR~~~~g-~VTy 202 (343)
T 3civ_A 162 KRTGCEMFCVGCEMTTA-----EPHEAMWRETIARVRTEYDG-LVTY 202 (343)
T ss_dssp HHTTCSEEEEEESCTTT-----TTCHHHHHHHHHHHHHHCCS-EEEE
T ss_pred cCCCceEEEECCCCCCC-----CchHHHHHHHHHHHHhhCCC-CEEE
Confidence 35568999999999764 24678999999999986433 5443
No 52
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=33.04 E-value=46 Score=34.67 Aligned_cols=49 Identities=16% Similarity=0.032 Sum_probs=30.1
Q ss_pred eccCCcEEEEEeccccCCccccCCCCcHHHHHHHHHHHHhCCCCcceEe
Q 005404 19 ASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVM 67 (698)
Q Consensus 19 ~~~GGPII~vQvENEYG~~~~~~g~~d~~Ym~~L~~~a~~~Gi~vp~~~ 67 (698)
+++--.||+.||-||.+.....-+..-.+|++.+.+.+|+..-+.|+++
T Consensus 164 y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~dp~~~v~~ 212 (373)
T 1rh9_A 164 YKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEI 212 (373)
T ss_dssp GGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHHCCSSEEEC
T ss_pred ccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHHHhhCCCceEEe
Confidence 4555689999999999763110011124456666667777666665543
No 53
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=30.35 E-value=1.2e+02 Score=34.74 Aligned_cols=76 Identities=18% Similarity=0.095 Sum_probs=45.4
Q ss_pred CccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEc-cccccceEEeecccccCC-cCeEEEEEe
Q 005404 317 TSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFG-TRENRRFTFSGPANLRAG-INKIALLSI 394 (698)
Q Consensus 317 ~~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~-~~~~~~~~~~~~~~l~~g-~~~L~ILve 394 (698)
..+=.+|+.+|++....+ ..-.+..|.+.+-. ...|||||.-+|.... ..-+..+-++.++ |++| .|+|. +.|
T Consensus 523 ~~~P~fy~g~f~i~~~~~--~~p~DTFLd~~gWg-KGvV~VNG~NLGRYW~~~GPQ~TLYvP~p~-Lk~G~~NeIi-VfE 597 (654)
T 3thd_A 523 YTLPAFYMGNFSIPSGIP--DLPQDTFIQFPGWT-KGQVWINGFNLGRYWPARGPQLTLFVPQHI-LMTSAPNTIT-VLE 597 (654)
T ss_dssp CCCCEEEEEEECCCSSCT--TCSCBEEEECTTCC-SEEEEETTEEEEEECTTTCSCCCEEECGGG-CCSSSCEEEE-EEE
T ss_pred CCCCEEEEEEEEccCCCC--CCCCCEEEeCCCCC-eEEEEECCcccccccCCCCCeEEEEecHHH-hCCCCCceEE-EEE
Confidence 457789999998743100 00012467766553 3479999999999863 2223334444332 6676 88885 455
Q ss_pred ecC
Q 005404 395 AVG 397 (698)
Q Consensus 395 n~G 397 (698)
-.+
T Consensus 598 le~ 600 (654)
T 3thd_A 598 LEW 600 (654)
T ss_dssp SSC
T ss_pred eec
Confidence 443
No 54
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=29.84 E-value=18 Score=38.12 Aligned_cols=50 Identities=22% Similarity=0.296 Sum_probs=36.8
Q ss_pred CCcEEEEEeccccCCcccc-CC------CCcHHHHHHHHHHHHhCCCCcceEeecCC
Q 005404 22 GGPIILSQIENEYGPESKS-LG------AAGHAYVNWAAKMAVGLDTGVPWVMCKED 71 (698)
Q Consensus 22 GGPII~vQvENEYG~~~~~-~g------~~d~~Ym~~L~~~a~~~Gi~vp~~~~~~~ 71 (698)
+|-|++.+|-||....... +. .-+.+|++..-+.||+..-+.+++.++-.
T Consensus 144 ~g~v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a~L~~Ndyn 200 (347)
T 1xyz_A 144 KGKIVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLFYNDYN 200 (347)
T ss_dssp TTTCSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred CCeeEEEEeecccccCCCcccccChHHHhcCHHHHHHHHHHHHhhCCCCEEEeccCc
Confidence 4569999999999763110 00 01257999999999999888889988853
No 55
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.13 E-value=46 Score=38.69 Aligned_cols=58 Identities=12% Similarity=0.094 Sum_probs=41.8
Q ss_pred ccEEEEEEEeecCCCcccccCCCCceeeeCCcceEEEEEECCEEEEEEEccccccceEEeecccccCCcCeEEEEEeec
Q 005404 318 SDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAV 396 (698)
Q Consensus 318 ~Gy~~Y~t~i~~~~~~~~l~~g~~~~L~v~~~~D~~~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~ 396 (698)
+.-.++|++|.+.+. ..|.|. ..-...+||||+.||..+ +. +.|++|.|.|.+++-|-
T Consensus 56 ~~~~~~rk~f~~~~~---------a~l~i~-a~G~ye~~iNG~~vg~y~-----~r------~~L~~G~N~i~v~lg~g 113 (739)
T 3cih_A 56 YVVVEFSKVLNLSEP---------EEVFIA-AEGTYNVKLDGKLQFGMP-----ET------LLLPAGKHSLNIKVWNQ 113 (739)
T ss_dssp CSEEEEEEEEEESSC---------EEEEEE-EESEEEEEETTEECSSCC-----SE------EEECSEEEEEEEEEECS
T ss_pred CcceeEEEEEEcCCC---------cEEEEE-EcCcEEEEECCEEccCCC-----Cc------eEecCCceEEEEEEEeC
Confidence 467889999987543 367776 444668999999999421 11 23678999999988765
No 56
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*
Probab=25.28 E-value=40 Score=34.80 Aligned_cols=49 Identities=16% Similarity=0.144 Sum_probs=35.7
Q ss_pred CCcEEEEEeccccCCcc-ccCC------CCcHHHHHHHHHHHHhCCCCcceEeecC
Q 005404 22 GGPIILSQIENEYGPES-KSLG------AAGHAYVNWAAKMAVGLDTGVPWVMCKE 70 (698)
Q Consensus 22 GGPII~vQvENEYG~~~-~~~g------~~d~~Ym~~L~~~a~~~Gi~vp~~~~~~ 70 (698)
+|-|++.||-||..... ..+- ..+.+|++..-+.||+..-+.+++.++-
T Consensus 116 ~g~v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af~~Ar~~dP~a~l~~ndy 171 (315)
T 3cui_A 116 EGKVASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDY 171 (315)
T ss_dssp TTTCCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEEEEEES
T ss_pred CCceEEEEeecccccCCCCccccchHHHhccHHHHHHHHHHHHhhCCCCEEEECCc
Confidence 45799999999987632 1000 0125799999999999888888888864
No 57
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=24.85 E-value=3.7e+02 Score=28.66 Aligned_cols=26 Identities=19% Similarity=0.177 Sum_probs=21.7
Q ss_pred cccccCCCCCCCCCCCCchhHHHHHHH
Q 005404 159 TTSYDYDAPLDEYGLMRQPKYGHLKQL 185 (698)
Q Consensus 159 ~TSYDY~APl~E~G~~~~~ky~~lr~l 185 (698)
..|.|-.|..|..|++ -|....+|.+
T Consensus 366 g~~~~n~~lfd~~g~~-l~sl~~f~~~ 391 (399)
T 1ur4_A 366 GSAVDNQALFDFKGRP-LPSLHVFQYV 391 (399)
T ss_dssp SCSCGGGCSBCTTSCB-CGGGGHHHHH
T ss_pred CCccccceeECCCCCC-chHHHHHhcc
Confidence 4678899999999999 6888888754
No 58
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=23.24 E-value=1.1e+02 Score=28.12 Aligned_cols=40 Identities=15% Similarity=0.096 Sum_probs=24.7
Q ss_pred EEEECCEEEEEEEccccccceEEeecccccCCcCeEEEEEe
Q 005404 354 HVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSI 394 (698)
Q Consensus 354 ~Vfvng~~~G~~~~~~~~~~~~~~~~~~l~~g~~~L~ILve 394 (698)
.++|||. .+.+.=............+.|++|.|+|.|...
T Consensus 66 ~L~VNG~-~~~V~fP~tt~~~~~~~~V~L~aG~NtI~i~~~ 105 (140)
T 2bgo_A 66 TLVMDGT-ALSYAFAEATVPVTYVQTKTLSAGNHSFGVRVG 105 (140)
T ss_dssp EEEETTE-EEEEEEESCCSCEEEEEEEEECSSCEEEEEECC
T ss_pred EEEECCc-eeEEEECCcCCcEEEEEEEEecCCccEEEEEec
Confidence 7899998 776642211111222223678999999999653
No 59
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=22.78 E-value=75 Score=35.34 Aligned_cols=62 Identities=18% Similarity=0.105 Sum_probs=36.7
Q ss_pred ceEEEEECCeeeeeeeeccccCCCCccccCCCcCCccccCCCCCCceeeEecCcccccCCcceEEEEEeeCC
Q 005404 494 GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLKPTKNLLVVFEELGG 565 (698)
Q Consensus 494 gKG~vwVNG~nlGRYW~~~~~g~~~~~~~~G~~~~~~~~~~~~~PQqtlY~vP~~~Lk~g~N~ivvfE~~g~ 565 (698)
++=+|.|||++ |.-- ....-..++|-++|.+ +|.-..--|.||+.+|++|.|+|.|--..++
T Consensus 428 ~~~qV~VN~~~-~~~~-~~~~~~~~~~i~R~~~--------~G~~~~~~~~ipa~~L~~G~NtI~lt~~~~s 489 (508)
T 1nkg_A 428 GRPQATINSYT-GSAP-AAPTNLDSRGVTRGAY--------RGLGEVYDVSIPSGTIVAGTNTITINVISGS 489 (508)
T ss_dssp CEEEEEETTEE-CCCC-CCCCCCCSCCGGGTCC--------CSCCCEEEEEECTTSSCSEEEEEEEEEECSC
T ss_pred CCeEEEECCcC-CcCc-cccccCCCCeEEecce--------eeeeEEEEEEEcHHHeecCceEEEEEeccCC
Confidence 67899999963 2221 1100011355555532 2233444566999999999999987544444
No 60
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=22.11 E-value=94 Score=28.18 Aligned_cols=41 Identities=22% Similarity=0.179 Sum_probs=27.7
Q ss_pred EEEEEECCEEEEEEEcc----ccccceEEeecccccCCcCeEEEEE
Q 005404 352 AVHVFINGQFLGSAFGT----RENRRFTFSGPANLRAGINKIALLS 393 (698)
Q Consensus 352 ~~~Vfvng~~~G~~~~~----~~~~~~~~~~~~~l~~g~~~L~ILv 393 (698)
.+.|+|||+.++.+.=. +.. -.+..+++.|++|.|+|.|-.
T Consensus 68 ~~~l~VNG~~~~~v~~p~Tg~W~~-w~t~~~~v~L~aG~ntI~l~~ 112 (145)
T 2w3j_A 68 RATVVVNDSQIKTLDFPTNSNWTQ-WQTVNVDIPLKAGTNSIKLVA 112 (145)
T ss_dssp CEEEEETTEEEEEECCCCCSCTTS-CEEEEEEEEECSEEEEEEEEE
T ss_pred EEEEEECCeEeeEEEecCCCCCCe-eEEEEEEEEECCCceEEEEEE
Confidence 56899999998776422 111 123344677899999998854
No 61
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=21.04 E-value=62 Score=33.25 Aligned_cols=145 Identities=18% Similarity=0.140 Sum_probs=80.2
Q ss_pred CCcEEEEEeccccCCccccC------CCCcHHHHHHHHHHHHhCCCCcceEeecCC-CCCC-----cc---ccC--CCCc
Q 005404 22 GGPIILSQIENEYGPESKSL------GAAGHAYVNWAAKMAVGLDTGVPWVMCKED-DAPD-----PV---INS--CNGF 84 (698)
Q Consensus 22 GGPII~vQvENEYG~~~~~~------g~~d~~Ym~~L~~~a~~~Gi~vp~~~~~~~-~~~~-----~v---~~~--~ng~ 84 (698)
+|-|++.+|-||..+....+ ...+.+|++..-+.||+..-+.+++.++-. ..+. .. +.. .+|.
T Consensus 120 ~g~v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~ 199 (303)
T 1i1w_A 120 KGKIRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSASYPKTQAIVNRVKKWRAAGV 199 (303)
T ss_dssp TTSCSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCCSSSHHHHHHHHHHHHHHHTTC
T ss_pred CCceeEEEeecCccCCCCCcccchHHHhcCHHHHHHHHHHHHHHCCCCeEEeccccccCCChHHHHHHHHHHHHHHHCCC
Confidence 46799999999997531101 012357999999999998888999988753 1221 00 110 0121
Q ss_pred ccc--cC----CC-------------CCCCC-CceeeeccCccccccCCCcCCCCHHHHHHHHHHHHHcCCceeeeeEee
Q 005404 85 YCD--AF----SP-------------NKPYK-PTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYH 144 (698)
Q Consensus 85 ~~~--~f----~~-------------~~p~~-P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YMfh 144 (698)
..+ .+ .. ..-+. |+++||+-.. ...++++...+..+++.. ...++.+
T Consensus 200 ~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~G~~pi~iTEldi~----------~~qa~~y~~~~~~~~~~~-~v~git~-- 266 (303)
T 1i1w_A 200 PIDGIGSQTHLSAGQGASVLQALPLLASAGTPEVAITELDVA----------GASSTDYVNVVNACLNVS-SCVGITV-- 266 (303)
T ss_dssp CCCEEEECCEECTTTHHHHHHHHHHHHTTCCSEEEEEEEEET----------TCCHHHHHHHHHHHHHCT-TEEEEEE--
T ss_pred cccEEEeccccCCCCHHHHHHHHHHHHHCCCCeEEEEeCCcc----------chHHHHHHHHHHHHHhCC-CceEEEE--
Confidence 100 00 00 02255 9999998422 134666666666666543 2233322
Q ss_pred ccCCCCCCCCCCcccccccCCCCCCCCCCCCchhHHHHHHHH
Q 005404 145 GGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLH 186 (698)
Q Consensus 145 GGTNfG~~~G~~~~~TSYDY~APl~E~G~~~~~ky~~lr~l~ 186 (698)
||+.-+.... +-++-.++++++++ .|-|..+++++
T Consensus 267 ----Wg~~D~~sW~--~~~~~~L~d~~~~p-KpAy~a~~~~l 301 (303)
T 1i1w_A 267 ----WGVADPDSWR--ASTTPLLFDGNFNP-KPAYNAIVQNL 301 (303)
T ss_dssp ----SCSBGGGSTT--GGGCCSSBCTTSCB-CHHHHHHHHHH
T ss_pred ----EcCCCCCCcC--CCCcceeECCCCCC-CHHHHHHHHHH
Confidence 3433211111 01234577889998 68998888763
Done!