Query 005406
Match_columns 698
No_of_seqs 458 out of 2890
Neff 9.6
Searched_HMMs 46136
Date Thu Mar 28 22:56:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005406.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005406hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256 Long-chain acyl-CoA sy 100.0 3E-114 6E-119 917.7 62.2 624 56-686 53-690 (691)
2 KOG1180 Acyl-CoA synthetase [L 100.0 5E-110 1E-114 843.5 55.9 640 42-684 6-677 (678)
3 PLN02736 long-chain acyl-CoA s 100.0 7E-100 1E-104 870.8 74.8 648 38-685 3-650 (651)
4 PLN02387 long-chain-fatty-acid 100.0 1.6E-97 3E-102 852.9 72.7 638 41-683 25-696 (696)
5 PLN02614 long-chain acyl-CoA s 100.0 4.2E-96 9E-101 837.1 72.5 629 53-687 22-660 (666)
6 PTZ00342 acyl-CoA synthetase; 100.0 6.5E-96 1E-100 832.7 70.1 628 41-684 28-745 (746)
7 PLN02861 long-chain-fatty-acid 100.0 5.3E-95 1.2E-99 828.8 73.4 626 53-686 20-656 (660)
8 PLN02430 long-chain-fatty-acid 100.0 8.5E-95 1.8E-99 825.5 73.4 628 54-687 20-657 (660)
9 COG1022 FAA1 Long-chain acyl-C 100.0 1E-93 2.3E-98 774.6 58.7 584 77-686 14-611 (613)
10 PTZ00216 acyl-CoA synthetase; 100.0 5.1E-92 1.1E-96 809.5 72.5 629 41-684 30-699 (700)
11 KOG1177 Long chain fatty acid 100.0 2.9E-80 6.2E-85 617.0 44.7 554 4-678 3-589 (596)
12 KOG1176 Acyl-CoA synthetase [L 100.0 2.3E-80 5.1E-85 666.1 45.8 498 87-676 24-532 (537)
13 PTZ00297 pantothenate kinase; 100.0 1.2E-75 2.6E-80 689.8 65.6 574 67-687 415-1006(1452)
14 PRK08180 feruloyl-CoA synthase 100.0 1.9E-75 4.1E-80 664.9 60.9 542 76-685 36-605 (614)
15 COG0318 CaiC Acyl-CoA syntheta 100.0 4.2E-76 9.1E-81 656.6 52.6 506 77-676 9-527 (534)
16 PRK12582 acyl-CoA synthetase; 100.0 4.3E-75 9.3E-80 663.3 59.8 563 56-687 26-618 (624)
17 COG0365 Acs Acyl-coenzyme A sy 100.0 1.5E-73 3.2E-78 609.9 46.7 494 83-676 13-522 (528)
18 PTZ00237 acetyl-CoA synthetase 100.0 1.6E-72 3.5E-77 642.2 51.2 529 75-675 55-622 (647)
19 PLN02860 o-succinylbenzoate-Co 100.0 3.9E-72 8.5E-77 632.4 52.2 524 77-680 5-558 (563)
20 PLN02654 acetate-CoA ligase 100.0 2.4E-71 5.1E-76 634.7 52.6 521 78-676 87-640 (666)
21 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 8.9E-71 1.9E-75 629.1 52.2 517 77-675 55-601 (625)
22 PRK07788 acyl-CoA synthetase; 100.0 7.4E-71 1.6E-75 621.0 50.5 494 79-672 49-547 (549)
23 PRK07529 AMP-binding domain pr 100.0 5.3E-70 1.1E-74 621.4 57.3 523 77-678 23-572 (632)
24 PRK06334 long chain fatty acid 100.0 1.1E-70 2.5E-75 616.0 50.7 496 77-676 17-535 (539)
25 TIGR02316 propion_prpE propion 100.0 2.4E-70 5.3E-75 624.7 53.0 524 77-675 50-603 (628)
26 PRK00174 acetyl-CoA synthetase 100.0 5.8E-70 1.3E-74 623.4 53.1 515 79-675 67-609 (637)
27 TIGR03443 alpha_am_amid L-amin 100.0 1.5E-69 3.3E-74 671.3 50.7 589 3-681 186-833 (1389)
28 PRK13295 cyclohexanecarboxylat 100.0 1.2E-68 2.6E-73 602.4 53.0 503 78-676 23-544 (547)
29 PRK04319 acetyl-CoA synthetase 100.0 5.2E-69 1.1E-73 608.1 49.6 507 77-674 41-557 (570)
30 COG1021 EntE Peptide arylation 100.0 2.7E-70 5.8E-75 533.3 31.8 500 77-676 26-538 (542)
31 PRK05677 long-chain-fatty-acid 100.0 5.2E-68 1.1E-72 599.0 54.3 512 77-677 22-558 (562)
32 TIGR01217 ac_ac_CoA_syn acetoa 100.0 6.1E-68 1.3E-72 605.6 53.0 512 79-675 87-625 (652)
33 PRK10524 prpE propionyl-CoA sy 100.0 5.6E-68 1.2E-72 606.5 52.3 523 78-675 52-604 (629)
34 PRK03584 acetoacetyl-CoA synth 100.0 8E-68 1.7E-72 607.3 53.6 511 80-675 87-624 (655)
35 PLN02574 4-coumarate--CoA liga 100.0 5.2E-68 1.1E-72 598.4 50.8 498 81-676 43-554 (560)
36 PLN02246 4-coumarate--CoA liga 100.0 1.3E-67 2.7E-72 593.0 52.7 501 76-675 20-535 (537)
37 PRK05857 acyl-CoA synthetase; 100.0 5.7E-68 1.2E-72 595.4 48.7 507 77-677 12-532 (540)
38 PRK09274 peptide synthase; Pro 100.0 1.2E-67 2.6E-72 595.5 50.9 504 78-678 5-550 (552)
39 PRK13382 acyl-CoA synthetase; 100.0 1E-67 2.2E-72 592.9 49.8 489 79-672 43-536 (537)
40 PRK08314 long-chain-fatty-acid 100.0 1.9E-67 4.2E-72 593.4 51.9 511 78-676 9-542 (546)
41 PRK12467 peptide synthase; Pro 100.0 5.7E-69 1.2E-73 707.9 45.5 531 3-674 3044-3592(3956)
42 PRK05620 long-chain-fatty-acid 100.0 1.9E-67 4.2E-72 596.1 51.7 518 78-677 9-558 (576)
43 PRK07769 long-chain-fatty-acid 100.0 1.2E-67 2.7E-72 603.6 48.5 503 77-675 19-613 (631)
44 PRK06060 acyl-CoA synthetase; 100.0 7.2E-68 1.6E-72 612.4 46.3 477 79-675 4-491 (705)
45 PRK06155 crotonobetaine/carnit 100.0 9.7E-67 2.1E-71 585.4 52.5 507 77-686 19-532 (542)
46 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.4E-66 2.9E-71 584.8 53.5 498 78-671 21-537 (538)
47 PRK08043 bifunctional acyl-[ac 100.0 2.1E-67 4.5E-72 608.8 47.9 491 77-676 202-713 (718)
48 PRK05852 acyl-CoA synthetase; 100.0 6.3E-67 1.4E-71 587.0 50.0 506 75-676 12-532 (534)
49 PRK03640 O-succinylbenzoic aci 100.0 2.2E-66 4.7E-71 576.0 51.1 476 78-676 1-482 (483)
50 PRK07656 long-chain-fatty-acid 100.0 2.9E-66 6.4E-71 579.6 52.5 501 77-672 3-512 (513)
51 PRK12467 peptide synthase; Pro 100.0 7.1E-68 1.5E-72 697.6 44.8 550 3-682 1523-2091(3956)
52 PRK05605 long-chain-fatty-acid 100.0 5.4E-66 1.2E-70 584.5 54.2 513 78-679 31-572 (573)
53 PLN02330 4-coumarate--CoA liga 100.0 2E-66 4.3E-71 584.3 49.8 517 55-677 11-542 (546)
54 PLN03102 acyl-activating enzym 100.0 2.9E-66 6.3E-71 585.5 51.3 523 79-685 14-564 (579)
55 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 3.1E-66 6.8E-71 580.4 51.1 494 77-671 21-527 (527)
56 PRK05691 peptide synthase; Val 100.0 1.5E-67 3.3E-72 700.7 47.2 537 3-673 3669-4225(4334)
57 PRK12316 peptide synthase; Pro 100.0 1.3E-67 2.7E-72 705.9 46.1 533 3-675 460-1005(5163)
58 PRK06839 acyl-CoA synthetase; 100.0 2.8E-66 6.1E-71 577.2 49.2 485 79-675 2-494 (496)
59 PRK07638 acyl-CoA synthetase; 100.0 3.7E-66 7.9E-71 574.4 49.7 475 79-676 1-481 (487)
60 PRK10252 entF enterobactin syn 100.0 5.9E-67 1.3E-71 646.0 48.0 529 3-672 409-963 (1296)
61 PRK07470 acyl-CoA synthetase; 100.0 5.6E-66 1.2E-70 578.9 51.4 498 77-676 5-518 (528)
62 PRK06087 short chain acyl-CoA 100.0 1.4E-65 3E-70 578.0 54.2 508 78-681 22-541 (547)
63 PRK07008 long-chain-fatty-acid 100.0 1.4E-65 3E-70 576.3 53.3 506 79-676 10-533 (539)
64 PRK07786 long-chain-fatty-acid 100.0 6.6E-66 1.4E-70 579.5 50.8 503 77-679 15-527 (542)
65 PRK12316 peptide synthase; Pro 100.0 3.2E-67 6.8E-72 702.1 46.8 550 3-683 4500-5067(5163)
66 PRK08008 caiC putative crotono 100.0 1.2E-65 2.6E-70 574.9 51.5 503 77-671 5-517 (517)
67 PRK07514 malonyl-CoA synthase; 100.0 2.2E-65 4.8E-70 571.1 52.7 495 79-677 3-502 (504)
68 PRK12476 putative fatty-acid-- 100.0 6.9E-66 1.5E-70 586.6 49.1 503 77-676 32-606 (612)
69 PLN03052 acetate--CoA ligase; 100.0 1.6E-65 3.5E-70 587.8 52.2 515 82-678 178-723 (728)
70 PRK08316 acyl-CoA synthetase; 100.0 1.4E-65 3.1E-70 575.5 50.2 506 77-679 9-522 (523)
71 PRK12492 long-chain-fatty-acid 100.0 1.6E-65 3.4E-70 578.7 50.4 506 78-673 23-561 (562)
72 PRK06187 long-chain-fatty-acid 100.0 3.9E-65 8.5E-70 571.7 52.6 506 77-676 4-519 (521)
73 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.5E-65 7.6E-70 571.2 51.5 497 80-672 1-514 (515)
74 PRK12583 acyl-CoA synthetase; 100.0 3.1E-65 6.7E-70 577.2 51.4 504 78-677 17-553 (558)
75 PRK08315 AMP-binding domain pr 100.0 5E-65 1.1E-69 575.4 52.5 505 78-677 15-552 (559)
76 PRK10946 entE enterobactin syn 100.0 1.3E-64 2.7E-69 568.1 52.3 497 78-677 24-533 (536)
77 PRK06164 acyl-CoA synthetase; 100.0 1.2E-64 2.7E-69 569.6 51.4 509 75-678 6-534 (540)
78 PRK06145 acyl-CoA synthetase; 100.0 1.7E-64 3.8E-69 562.7 50.9 487 78-674 1-495 (497)
79 PRK06018 putative acyl-CoA syn 100.0 2.3E-64 4.9E-69 567.1 52.1 509 77-676 8-534 (542)
80 PRK06188 acyl-CoA synthetase; 100.0 2.9E-64 6.3E-69 564.4 50.5 497 77-676 10-517 (524)
81 PLN02479 acetate-CoA ligase 100.0 3.4E-64 7.3E-69 568.3 51.3 517 78-676 19-558 (567)
82 PRK05851 long-chain-fatty-acid 100.0 1.8E-65 4E-70 573.1 40.2 479 81-676 4-522 (525)
83 PRK08633 2-acyl-glycerophospho 100.0 1.6E-64 3.4E-69 618.3 51.8 505 76-677 612-1144(1146)
84 PRK07059 Long-chain-fatty-acid 100.0 6.3E-64 1.4E-68 565.6 51.8 507 77-673 21-555 (557)
85 PRK07867 acyl-CoA synthetase; 100.0 8E-64 1.7E-68 559.7 51.9 491 77-679 3-510 (529)
86 PRK05691 peptide synthase; Val 100.0 2.9E-65 6.3E-70 678.9 46.8 527 4-673 1083-1625(4334)
87 PRK09088 acyl-CoA synthetase; 100.0 2.5E-64 5.4E-69 560.0 46.7 473 86-676 2-485 (488)
88 TIGR02262 benz_CoA_lig benzoat 100.0 7.7E-64 1.7E-68 558.9 49.1 496 79-672 4-507 (508)
89 PRK13388 acyl-CoA synthetase; 100.0 7.1E-64 1.5E-68 561.9 47.5 484 79-674 3-504 (540)
90 PRK08279 long-chain-acyl-CoA s 100.0 7.9E-64 1.7E-68 569.4 46.8 501 77-677 35-565 (600)
91 PRK07445 O-succinylbenzoic aci 100.0 4.5E-64 9.8E-69 549.1 42.9 424 114-679 20-450 (452)
92 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.3E-63 2.8E-68 556.6 47.0 484 80-675 1-501 (502)
93 PRK06178 acyl-CoA synthetase; 100.0 8.2E-63 1.8E-67 557.8 51.6 509 78-676 32-565 (567)
94 PRK08751 putative long-chain f 100.0 4.7E-63 1E-67 559.1 49.3 506 78-673 24-557 (560)
95 PRK06710 long-chain-fatty-acid 100.0 4.2E-63 9E-68 559.7 48.8 509 78-676 23-555 (563)
96 TIGR03205 pimA dicarboxylate-- 100.0 1.9E-62 4.2E-67 551.5 52.7 506 77-671 19-541 (541)
97 PRK07787 acyl-CoA synthetase; 100.0 7.3E-63 1.6E-67 545.3 46.0 453 89-672 10-469 (471)
98 PRK06814 acylglycerophosphoeth 100.0 1.8E-62 3.9E-67 597.9 53.3 496 77-677 629-1133(1140)
99 PRK13390 acyl-CoA synthetase; 100.0 1.1E-62 2.4E-67 548.5 45.8 484 87-671 5-501 (501)
100 PRK13383 acyl-CoA synthetase; 100.0 3.5E-62 7.7E-67 546.2 49.9 476 77-671 33-515 (516)
101 PRK04813 D-alanine--poly(phosp 100.0 7.8E-62 1.7E-66 542.5 50.6 483 79-675 2-502 (503)
102 PRK13391 acyl-CoA synthetase; 100.0 1.1E-61 2.3E-66 541.8 50.5 495 86-676 4-509 (511)
103 PRK08974 long-chain-fatty-acid 100.0 1.6E-61 3.4E-66 546.5 52.0 511 78-679 22-558 (560)
104 PRK09192 acyl-CoA synthetase; 100.0 3.3E-62 7.3E-67 553.4 45.0 497 75-677 17-567 (579)
105 PRK09029 O-succinylbenzoic aci 100.0 4.8E-62 1E-66 536.9 44.6 442 86-677 10-454 (458)
106 PRK07798 acyl-CoA synthetase; 100.0 5.3E-61 1.2E-65 539.8 52.9 502 79-676 3-532 (533)
107 PRK08162 acyl-CoA synthetase; 100.0 4.4E-61 9.6E-66 541.4 52.1 506 79-676 18-539 (545)
108 PRK07868 acyl-CoA synthetase; 100.0 1.3E-61 2.9E-66 573.2 48.4 536 4-673 400-955 (994)
109 PLN03051 acyl-activating enzym 100.0 1.9E-61 4.1E-66 537.0 42.2 459 145-679 1-494 (499)
110 PRK05850 acyl-CoA synthetase; 100.0 4.5E-61 9.8E-66 544.9 45.5 504 80-677 2-569 (578)
111 PRK08276 long-chain-fatty-acid 100.0 1.2E-60 2.7E-65 532.3 47.8 478 112-679 10-499 (502)
112 KOG1175 Acyl-CoA synthetase [L 100.0 4.4E-61 9.6E-66 513.7 38.5 505 83-677 68-603 (626)
113 PRK12406 long-chain-fatty-acid 100.0 4.6E-60 9.9E-65 528.6 48.5 480 112-676 10-503 (509)
114 TIGR01923 menE O-succinylbenzo 100.0 4.3E-59 9.3E-64 510.7 43.5 432 115-670 1-436 (436)
115 PRK07768 long-chain-fatty-acid 100.0 1.9E-58 4E-63 519.9 47.6 490 79-675 2-544 (545)
116 PRK08308 acyl-CoA synthetase; 100.0 6.9E-57 1.5E-61 489.0 44.3 396 112-670 7-407 (414)
117 PF00501 AMP-binding: AMP-bind 100.0 7.3E-58 1.6E-62 497.9 33.9 401 85-550 1-416 (417)
118 KOG1179 Very long-chain acyl-C 100.0 8.4E-55 1.8E-59 444.0 37.1 501 77-673 75-610 (649)
119 TIGR01733 AA-adenyl-dom amino 100.0 1.1E-53 2.3E-58 463.8 37.9 389 115-576 1-408 (408)
120 PRK07824 O-succinylbenzoic aci 100.0 1E-47 2.3E-52 408.8 31.1 317 253-676 32-357 (358)
121 COG1020 EntF Non-ribosomal pep 100.0 8.8E-44 1.9E-48 408.4 40.6 454 4-569 181-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 9.1E-40 2E-44 346.0 29.1 287 256-666 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 6.2E-35 1.3E-39 317.0 30.8 329 253-668 72-418 (422)
124 KOG1178 Non-ribosomal peptide 100.0 4.3E-31 9.3E-36 296.8 24.9 503 78-673 35-576 (1032)
125 KOG3628 Predicted AMP-binding 100.0 2.9E-28 6.2E-33 264.7 40.4 515 78-682 769-1358(1363)
126 TIGR03335 F390_ftsA coenzyme F 100.0 2.7E-26 5.9E-31 249.4 30.6 259 253-572 83-359 (445)
127 TIGR03089 conserved hypothetic 99.9 4E-25 8.7E-30 216.9 24.0 222 85-345 2-227 (227)
128 COG1541 PaaK Coenzyme F390 syn 99.9 2.4E-22 5.2E-27 207.0 29.2 280 253-593 87-384 (438)
129 PRK09188 serine/threonine prot 99.8 2E-19 4.3E-24 186.5 12.0 113 520-674 207-326 (365)
130 KOG3628 Predicted AMP-binding 99.8 8.8E-18 1.9E-22 183.8 24.5 509 77-676 92-704 (1363)
131 TIGR02304 aden_form_hyp probab 99.7 4.9E-15 1.1E-19 157.5 29.7 258 258-593 101-379 (430)
132 PF13193 AMP-binding_C: AMP-bi 98.9 2.6E-09 5.6E-14 84.5 5.4 67 560-664 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 98.9 1.5E-07 3.3E-12 98.2 19.2 230 254-547 87-351 (365)
134 PF03321 GH3: GH3 auxin-respon 98.5 2.5E-06 5.5E-11 94.3 16.6 162 411-594 267-452 (528)
135 PLN02249 indole-3-acetic acid- 98.4 0.0001 2.2E-09 81.9 24.8 132 413-567 307-456 (597)
136 PLN02247 indole-3-acetic acid- 97.9 0.001 2.2E-08 73.4 19.9 139 411-568 293-464 (606)
137 PLN02620 indole-3-acetic acid- 97.6 0.0041 8.9E-08 68.6 18.8 138 411-568 304-470 (612)
138 PF14535 AMP-binding_C_2: AMP- 96.5 0.014 3E-07 48.6 7.7 86 553-667 1-91 (96)
139 COG1541 PaaK Coenzyme F390 syn 93.7 0.38 8.1E-06 51.1 9.6 93 111-204 107-201 (438)
140 TIGR02155 PA_CoA_ligase phenyl 86.2 7.6 0.00016 42.1 12.0 96 105-201 84-183 (422)
141 TIGR03335 F390_ftsA coenzyme F 85.0 9.8 0.00021 41.6 12.1 92 105-199 95-190 (445)
142 PRK07656 long-chain-fatty-acid 73.4 41 0.00088 37.2 12.7 104 92-201 164-271 (513)
143 PRK06187 long-chain-fatty-acid 70.3 64 0.0014 35.7 13.4 102 94-201 167-271 (521)
144 TIGR01923 menE O-succinylbenzo 67.9 64 0.0014 34.8 12.4 114 93-214 110-226 (436)
145 PF00501 AMP-binding: AMP-bind 66.5 68 0.0015 34.3 12.2 120 92-217 153-287 (417)
146 PRK12583 acyl-CoA synthetase; 66.0 1E+02 0.0022 34.6 14.0 103 92-199 199-305 (558)
147 PRK08315 AMP-binding domain pr 64.6 97 0.0021 34.8 13.5 103 93-200 198-304 (559)
148 PRK06334 long chain fatty acid 59.4 1.7E+02 0.0037 32.7 14.2 118 92-214 181-306 (539)
149 TIGR01733 AA-adenyl-dom amino 58.9 1.9E+02 0.0042 30.5 14.0 119 93-216 119-243 (408)
150 PLN03051 acyl-activating enzym 57.9 94 0.002 34.4 11.6 104 93-201 118-224 (499)
151 PRK04319 acetyl-CoA synthetase 54.4 1.5E+02 0.0031 33.5 12.6 104 93-201 204-311 (570)
152 PRK07788 acyl-CoA synthetase; 52.5 1.5E+02 0.0032 33.3 12.2 117 94-216 207-332 (549)
153 PF01037 AsnC_trans_reg: AsnC 52.3 1E+02 0.0022 23.4 7.8 46 548-595 3-48 (74)
154 PLN02860 o-succinylbenzoate-Co 51.7 2.2E+02 0.0047 32.1 13.4 104 92-201 170-276 (563)
155 PRK08308 acyl-CoA synthetase; 51.7 2.7E+02 0.006 29.7 13.7 105 92-202 99-207 (414)
156 PRK03584 acetoacetyl-CoA synth 51.5 1.7E+02 0.0038 33.7 12.8 120 93-216 262-392 (655)
157 PRK09274 peptide synthase; Pro 51.0 1.2E+02 0.0026 34.0 11.2 97 254-351 19-121 (552)
158 PRK07638 acyl-CoA synthetase; 50.5 2.3E+02 0.005 31.0 13.2 94 105-202 152-248 (487)
159 TIGR03089 conserved hypothetic 50.0 92 0.002 30.4 8.7 54 131-186 171-226 (227)
160 TIGR03098 ligase_PEP_1 acyl-Co 49.3 1.7E+02 0.0038 32.2 12.1 93 105-201 170-265 (515)
161 PRK06188 acyl-CoA synthetase; 44.9 2.8E+02 0.0062 30.7 12.9 102 94-201 168-271 (524)
162 PRK13295 cyclohexanecarboxylat 44.8 3.6E+02 0.0079 30.1 13.8 103 92-200 195-301 (547)
163 COG0399 WecE Predicted pyridox 44.6 98 0.0021 32.7 8.3 65 123-191 59-128 (374)
164 KOG1176 Acyl-CoA synthetase [L 44.4 1.2E+02 0.0027 33.9 9.4 87 273-360 43-136 (537)
165 PLN03052 acetate--CoA ligase; 43.7 1.9E+02 0.0041 33.9 11.5 98 254-353 188-290 (728)
166 PLN02736 long-chain acyl-CoA s 43.7 2.3E+02 0.005 32.7 12.2 103 254-359 57-166 (651)
167 PRK07008 long-chain-fatty-acid 43.3 2.3E+02 0.0049 31.7 11.8 106 92-201 174-283 (539)
168 PLN03102 acyl-activating enzym 42.9 1.7E+02 0.0037 33.2 10.8 94 254-357 27-125 (579)
169 PTZ00237 acetyl-CoA synthetase 42.4 2E+02 0.0044 33.1 11.4 94 254-351 74-172 (647)
170 PRK03640 O-succinylbenzoic aci 42.3 2.2E+02 0.0047 31.1 11.4 103 93-201 140-245 (483)
171 PRK08043 bifunctional acyl-[ac 41.1 4E+02 0.0088 31.1 13.8 118 92-214 363-486 (718)
172 TIGR02188 Ac_CoA_lig_AcsA acet 40.4 2E+02 0.0044 32.8 11.0 95 254-352 70-169 (625)
173 COG2236 Predicted phosphoribos 40.3 51 0.0011 31.2 4.8 34 111-144 4-37 (192)
174 PLN02654 acetate-CoA ligase 40.0 2.2E+02 0.0047 33.0 11.2 96 254-353 102-202 (666)
175 TIGR02316 propion_prpE propion 39.6 2.9E+02 0.0063 31.6 12.2 119 93-216 231-363 (628)
176 COG4009 Uncharacterized protei 39.4 1.4E+02 0.0031 23.4 6.1 64 114-188 10-76 (88)
177 PRK05857 acyl-CoA synthetase; 39.3 1.7E+02 0.0036 32.8 9.9 92 254-353 27-123 (540)
178 PRK00174 acetyl-CoA synthetase 39.2 2.1E+02 0.0045 32.9 10.9 95 254-352 80-179 (637)
179 PF01041 DegT_DnrJ_EryC1: DegT 38.4 83 0.0018 33.2 6.9 65 124-192 51-120 (363)
180 cd01445 TST_Repeats Thiosulfat 38.1 94 0.002 27.6 6.1 46 123-168 80-128 (138)
181 PRK06155 crotonobetaine/carnit 37.6 2.6E+02 0.0056 31.3 11.1 83 275-358 46-133 (542)
182 PF00818 Ice_nucleation: Ice n 37.6 14 0.00031 19.2 0.4 9 442-450 1-9 (16)
183 PRK08316 acyl-CoA synthetase; 37.2 2.5E+02 0.0055 30.9 11.0 96 254-359 24-124 (523)
184 PRK06839 acyl-CoA synthetase; 37.2 2.8E+02 0.006 30.4 11.2 94 254-357 15-114 (496)
185 PRK10524 prpE propionyl-CoA sy 36.5 2.7E+02 0.0058 31.9 11.3 94 254-351 66-164 (629)
186 PRK08008 caiC putative crotono 35.8 2.8E+02 0.0061 30.6 11.0 99 254-357 20-123 (517)
187 PRK13388 acyl-CoA synthetase; 35.5 2.8E+02 0.0061 31.0 11.0 94 254-357 14-113 (540)
188 PLN02246 4-coumarate--CoA liga 35.1 2.6E+02 0.0057 31.1 10.7 96 254-357 36-136 (537)
189 PRK07798 acyl-CoA synthetase; 34.5 3.1E+02 0.0068 30.2 11.2 95 254-358 16-115 (533)
190 PF09580 Spore_YhcN_YlaJ: Spor 34.5 63 0.0014 30.0 4.7 34 557-591 76-109 (177)
191 PRK13391 acyl-CoA synthetase; 34.3 3E+02 0.0066 30.3 11.0 96 254-357 10-110 (511)
192 PRK07787 acyl-CoA synthetase; 34.3 6E+02 0.013 27.6 13.2 116 92-214 126-248 (471)
193 PRK05852 acyl-CoA synthetase; 34.0 6.9E+02 0.015 27.7 14.2 94 105-201 185-283 (534)
194 TIGR02262 benz_CoA_lig benzoat 33.9 3E+02 0.0064 30.4 10.8 102 93-198 160-265 (508)
195 PRK07514 malonyl-CoA synthase; 33.6 3.3E+02 0.0071 29.9 11.1 85 273-358 26-115 (504)
196 TIGR01217 ac_ac_CoA_syn acetoa 33.5 3.1E+02 0.0068 31.6 11.1 92 256-352 99-195 (652)
197 TIGR03590 PseG pseudaminic aci 33.4 3.4E+02 0.0074 27.3 10.1 90 121-218 18-112 (279)
198 TIGR02379 ECA_wecE TDP-4-keto- 33.4 1.4E+02 0.0031 31.7 7.7 59 130-192 63-126 (376)
199 PF06543 Lac_bphage_repr: Lact 33.1 33 0.00071 23.8 1.7 26 414-439 22-47 (49)
200 PRK05605 long-chain-fatty-acid 33.0 2.9E+02 0.0062 31.1 10.6 94 254-357 45-143 (573)
201 PRK08279 long-chain-acyl-CoA s 32.8 3.1E+02 0.0068 31.1 10.9 95 254-358 50-149 (600)
202 PLN02565 cysteine synthase 32.6 3.2E+02 0.007 28.3 9.9 72 123-194 50-122 (322)
203 PRK05677 long-chain-fatty-acid 32.0 2.9E+02 0.0062 31.1 10.4 93 254-356 37-135 (562)
204 PLN02330 4-coumarate--CoA liga 31.8 2.3E+02 0.0051 31.6 9.6 96 254-357 41-141 (546)
205 PRK08314 long-chain-fatty-acid 31.5 2.9E+02 0.0062 30.8 10.2 84 275-359 35-124 (546)
206 PRK11706 TDP-4-oxo-6-deoxy-D-g 31.5 1.7E+02 0.0037 31.0 7.9 57 131-191 64-125 (375)
207 PRK07470 acyl-CoA synthetase; 30.8 7.6E+02 0.016 27.2 13.8 106 93-201 162-270 (528)
208 TIGR03208 cyc_hxne_CoA_lg cycl 30.8 7.5E+02 0.016 27.4 13.5 117 92-214 193-317 (538)
209 PRK05620 long-chain-fatty-acid 30.8 7.8E+02 0.017 27.6 13.7 105 93-200 180-287 (576)
210 KOG1177 Long chain fatty acid 30.5 6.2E+02 0.013 27.8 11.3 105 91-200 231-339 (596)
211 PRK06164 acyl-CoA synthetase; 30.2 4.7E+02 0.01 29.0 11.7 102 93-200 180-284 (540)
212 PRK07529 AMP-binding domain pr 29.8 3.1E+02 0.0067 31.5 10.2 95 254-351 38-137 (632)
213 TIGR02275 DHB_AMP_lig 2,3-dihy 29.7 8E+02 0.017 27.1 13.5 117 92-214 181-306 (527)
214 PRK09088 acyl-CoA synthetase; 29.6 3.7E+02 0.008 29.4 10.6 92 254-353 8-104 (488)
215 TIGR01734 D-ala-DACP-lig D-ala 29.1 7.8E+02 0.017 26.8 13.3 102 93-199 140-246 (502)
216 COG0318 CaiC Acyl-CoA syntheta 29.0 4.5E+02 0.0098 29.3 11.2 91 254-352 24-119 (534)
217 PRK08162 acyl-CoA synthetase; 28.7 4E+02 0.0087 29.6 10.8 83 275-358 43-130 (545)
218 PRK10946 entE enterobactin syn 28.4 7.4E+02 0.016 27.5 12.9 103 93-201 181-288 (536)
219 PLN02614 long-chain acyl-CoA s 27.6 6.4E+02 0.014 29.1 12.4 102 254-358 58-166 (666)
220 PRK08633 2-acyl-glycerophospho 27.5 7.4E+02 0.016 30.7 13.8 105 92-201 780-888 (1146)
221 PRK08276 long-chain-fatty-acid 27.3 3.3E+02 0.0072 29.9 9.7 82 275-357 11-97 (502)
222 PRK11761 cysM cysteine synthas 27.2 4.3E+02 0.0092 27.0 9.6 70 123-193 47-117 (296)
223 TIGR00067 glut_race glutamate 27.0 4.9E+02 0.011 25.8 9.7 61 83-150 12-73 (251)
224 PLN02556 cysteine synthase/L-3 26.8 5.5E+02 0.012 27.2 10.6 62 132-193 103-165 (368)
225 PRK13390 acyl-CoA synthetase; 26.3 4.5E+02 0.0098 28.8 10.6 92 254-353 10-106 (501)
226 COG0796 MurI Glutamate racemas 26.3 5.9E+02 0.013 25.6 9.8 82 83-171 19-100 (269)
227 PRK10252 entF enterobactin syn 26.0 7.4E+02 0.016 31.3 13.5 120 92-216 596-726 (1296)
228 PRK02261 methylaspartate mutas 25.9 4.7E+02 0.01 23.2 9.4 44 307-350 15-61 (137)
229 TIGR01139 cysK cysteine syntha 25.8 4.8E+02 0.01 26.5 9.8 65 129-194 47-112 (298)
230 PRK06087 short chain acyl-CoA 25.7 3.4E+02 0.0073 30.3 9.5 88 254-350 36-128 (547)
231 PRK07059 Long-chain-fatty-acid 25.6 4.6E+02 0.0099 29.3 10.6 92 254-355 36-132 (557)
232 PLN02574 4-coumarate--CoA liga 25.4 4.9E+02 0.011 29.2 10.8 96 254-357 52-153 (560)
233 PRK00865 glutamate racemase; P 25.3 5E+02 0.011 25.9 9.5 61 83-150 19-79 (261)
234 TIGR03443 alpha_am_amid L-amin 25.3 3.2E+02 0.007 34.8 10.2 97 254-351 249-350 (1389)
235 PRK12476 putative fatty-acid-- 25.1 6.9E+02 0.015 28.4 12.0 101 254-357 47-156 (612)
236 PRK05850 acyl-CoA synthetase; 25.0 6.5E+02 0.014 28.3 11.7 102 254-359 14-125 (578)
237 PRK08751 putative long-chain f 24.8 4.4E+02 0.0096 29.4 10.3 94 254-357 38-137 (560)
238 KOG0023 Alcohol dehydrogenase, 24.7 4.3E+02 0.0093 27.3 8.5 74 129-205 173-246 (360)
239 cd01519 RHOD_HSP67B2 Member of 24.3 2.2E+02 0.0048 23.3 5.9 52 113-164 37-92 (106)
240 TIGR02370 pyl_corrinoid methyl 24.0 6.2E+02 0.014 23.9 10.7 112 278-431 64-185 (197)
241 PF05452 Clavanin: Clavanin; 24.0 32 0.0007 25.6 0.5 18 504-528 62-79 (80)
242 cd02069 methionine_synthase_B1 23.8 5.7E+02 0.012 24.6 9.2 82 308-429 101-185 (213)
243 PLN02479 acetate-CoA ligase 23.8 6.3E+02 0.014 28.3 11.3 94 254-357 33-131 (567)
244 PRK12492 long-chain-fatty-acid 23.7 3.8E+02 0.0083 30.0 9.5 81 274-355 48-134 (562)
245 PRK11658 UDP-4-amino-4-deoxy-L 23.5 3.1E+02 0.0066 29.1 8.1 62 125-190 60-126 (379)
246 PLN02861 long-chain-fatty-acid 23.4 4.7E+02 0.01 30.2 10.2 84 274-358 76-164 (660)
247 PRK06060 acyl-CoA synthetase; 23.1 7.9E+02 0.017 28.5 12.2 120 93-216 144-269 (705)
248 TIGR01136 cysKM cysteine synth 23.0 5.7E+02 0.012 26.0 9.8 66 128-194 47-113 (299)
249 PRK03317 histidinol-phosphate 23.0 8E+02 0.017 25.6 11.2 54 136-192 110-167 (368)
250 TIGR00936 ahcY adenosylhomocys 22.9 6.2E+02 0.013 27.2 10.0 61 135-195 29-91 (406)
251 PRK15407 lipopolysaccharide bi 22.9 3E+02 0.0066 29.9 8.0 57 132-192 105-166 (438)
252 PRK06814 acylglycerophosphoeth 22.8 1.2E+03 0.026 28.9 14.4 118 92-214 791-914 (1140)
253 TIGR02898 spore_YhcN_YlaJ spor 22.8 4.8E+02 0.01 23.8 7.9 32 558-590 56-87 (158)
254 TIGR03588 PseC UDP-4-keto-6-de 22.7 3.6E+02 0.0079 28.5 8.6 65 124-191 55-127 (380)
255 PLN02387 long-chain-fatty-acid 21.5 5.1E+02 0.011 30.2 10.1 85 274-359 105-194 (696)
256 PRK13383 acyl-CoA synthetase; 21.3 4.5E+02 0.0098 29.0 9.3 82 275-357 60-146 (516)
257 COG1167 ARO8 Transcriptional r 21.3 4.3E+02 0.0092 29.0 8.8 55 137-194 178-235 (459)
258 cd06448 L-Ser-dehyd Serine deh 21.3 6.2E+02 0.014 26.0 9.6 63 131-194 44-106 (316)
259 COG0365 Acs Acyl-coenzyme A sy 20.9 5.3E+02 0.011 28.9 9.3 95 256-357 25-126 (528)
260 PLN03013 cysteine synthase 20.9 6.4E+02 0.014 27.3 9.7 66 129-194 164-230 (429)
261 COG0043 UbiD 3-polyprenyl-4-hy 20.8 6E+02 0.013 27.9 9.4 53 540-594 307-359 (477)
262 PRK10696 tRNA 2-thiocytidine b 20.4 8E+02 0.017 24.3 9.9 70 123-192 13-94 (258)
263 COG0036 Rpe Pentose-5-phosphat 20.3 3E+02 0.0065 26.6 6.3 27 166-192 114-140 (220)
264 COG1223 Predicted ATPase (AAA+ 20.2 1.6E+02 0.0034 29.3 4.4 69 79-153 197-268 (368)
265 PF14706 Tnp_DNA_bind: Transpo 20.2 55 0.0012 24.2 1.1 23 3-25 14-36 (58)
No 1
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=2.6e-114 Score=917.67 Aligned_cols=624 Identities=50% Similarity=0.864 Sum_probs=578.8
Q ss_pred CcccccCCCCc-cccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCC
Q 005406 56 WNVYRSARSPL-TLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHG 134 (698)
Q Consensus 56 ~~~~r~~~~~~-~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g 134 (698)
.++||+...+. .+... ......|+++.|.+.+..+|+.++++.+...+ ..++|+|+||+|+.+++.++|++|+++|
T Consensus 53 ~~~~~s~~~~~~~~~~~--~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG 129 (691)
T KOG1256|consen 53 DGSRRSAVLPREELFSC--PFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLG 129 (691)
T ss_pred CCceeeeeccCCCCCCC--CCCCcccHHHHhhcchhccCCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhC
Confidence 46778776642 22222 24578999999999999999999999995544 3578999999999999999999999999
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEec-ccchHHHHhhhh--cCCceeE
Q 005406 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCI-PQTLNTLLSFIS--EIPSVHL 211 (698)
Q Consensus 135 v~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~-~~~~~~~~~~~~--~~~~~~~ 211 (698)
+++++.|||++.|++||+++.+||..+|+++|||+++++++++.||++++.+.++|++ ++....+.+... .+|.++.
T Consensus 130 ~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~ 209 (691)
T KOG1256|consen 130 VKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKA 209 (691)
T ss_pred CCCCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCcccee
Confidence 9999999999999999999999999999999999999999999999999999999999 566777777666 3789999
Q ss_pred EEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCC-CCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc
Q 005406 212 IVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPF-CPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL 290 (698)
Q Consensus 212 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~ 290 (698)
+|.+++............++.+++|+++++.|....... .++.|+|.|.|+|||||||+|||||+||+|+++.+.....
T Consensus 210 iI~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~ 289 (691)
T KOG1256|consen 210 IIQLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFF 289 (691)
T ss_pred EEEecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhh
Confidence 999999888888888888999999999999997766665 5889999999999999999999999999999986553211
Q ss_pred ---c---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHH
Q 005406 291 ---M---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNA 364 (698)
Q Consensus 291 ---~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 364 (698)
. ......|+++|||||+|+++++.....++.|++++|+++|+..+.+++++.+||.+.+||++|+++++.+++.
T Consensus 290 ~~~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~ 369 (691)
T KOG1256|consen 290 LSAAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQ 369 (691)
T ss_pred hhhcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHH
Confidence 1 1223479999999999999999988888999999999999999999999999999999999999999999999
Q ss_pred HhhcchHHHHHHHHHHHHHH-HHHHcCCCC--chhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceec
Q 005406 365 VKASGTLREKLFTAAYNSKK-QAIVSGQTP--SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVME 441 (698)
Q Consensus 365 ~~~~~~~~~~l~~~~~~~k~-~~~~~~~~~--~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~ 441 (698)
+.+.+.+++++|+.|+..|. ..+..|... ..+||+++|+|+++.||+++|.+++|++|+++++..+++..+||+|++
T Consensus 370 ~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~e 449 (691)
T KOG1256|consen 370 VQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLE 449 (691)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeee
Confidence 99999999999999999999 777777765 699999999999999999999999999999999999999999999999
Q ss_pred ccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCC
Q 005406 442 GYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGD 521 (698)
Q Consensus 442 ~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~ 521 (698)
+||+|||++.++...+++...+++|.|+|++++|++|+++++|...+. .|||||||+++|.|||+||++|+++||+|
T Consensus 450 GYGlTEts~g~~~~~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~---~GEIcirG~~Vf~GYyK~p~~T~e~ideD 526 (691)
T KOG1256|consen 450 GYGLTETSAGTTLTLPGDNVLGSVGPPVPGNEVKLVDVPEMNYDADGS---KGEICVRGPNVFMGYYKDPEKTAEAIDED 526 (691)
T ss_pred cccccccCCceEeccCCCCCCCCcCCcccCceEEEechHHhCcCcCCC---cceEEEecchhceeccCChHHHhhhhccc
Confidence 999999998788777777799999999999999999999999999987 89999999999999999999999999999
Q ss_pred CceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHH
Q 005406 522 GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAA 601 (698)
Q Consensus 522 gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~ 601 (698)
||+||||+|+|+++|.|+|+||+|++||+++||||.|+.||+++.+.+.|.+++|+|++.+.+++|+|+|+++....|+.
T Consensus 527 GWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~~~LvaiVvpd~e~~~~~a~ 606 (691)
T KOG1256|consen 527 GWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLRSFLVAIVVPDPEVLKSWAA 606 (691)
T ss_pred cccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcchhcEEEEEecChhhchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHH
Q 005406 602 SQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNM 681 (698)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~l 681 (698)
++++. .+++++|++.++++.+..+|.++.++++|.+++..+.|++.+++||++||++|||.|++|..+.++|+++||+|
T Consensus 607 ~~~~~-~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~m 685 (691)
T KOG1256|consen 607 KDGVK-GTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDEL 685 (691)
T ss_pred HccCc-hhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHHHH
Confidence 88888 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhccc
Q 005406 682 YAELA 686 (698)
Q Consensus 682 y~~~~ 686 (698)
|++.+
T Consensus 686 Y~~~~ 690 (691)
T KOG1256|consen 686 YKEIK 690 (691)
T ss_pred Hhhcc
Confidence 99864
No 2
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-110 Score=843.53 Aligned_cols=640 Identities=39% Similarity=0.633 Sum_probs=594.3
Q ss_pred CceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEee--------cCCc------
Q 005406 42 GYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVR--------VDGT------ 107 (698)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~--------~~~~------ 107 (698)
+++|++.....++++.+|||....+.|++. +.+...|++++|+..++++.++.++++|+. .||+
T Consensus 6 ~~~V~~~~~~n~~e~~p~Rnv~~~~~L~~~--~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~ 83 (678)
T KOG1180|consen 6 KYRVKAKPAANEHETAPYRNVRSFDGLVSP--PNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYE 83 (678)
T ss_pred hcccccCCCCCCCCCccccccccCCCccCC--CCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEe
Confidence 466766666566778899999886667754 466899999999999999999999999865 3454
Q ss_pred cCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCE-EEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccc
Q 005406 108 VGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVR-IGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEI 186 (698)
Q Consensus 108 ~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~-V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~ 186 (698)
.++|.|+||.|+.+++.++|++|.+.|++++++ |+|+++.+.+|+++.+||++.+.++|.++.+++.+.+.|-|+++++
T Consensus 84 Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~ 163 (678)
T KOG1180|consen 84 LGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETES 163 (678)
T ss_pred ccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccc
Confidence 578999999999999999999999999998775 9999999999999999999999999999999999999999999999
Q ss_pred eEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCC----CCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEE
Q 005406 187 EAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLP----SLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATIC 262 (698)
Q Consensus 187 ~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 262 (698)
+.+||+.+.+..+...++.++.++.||.+++.+.... ......++.+++|+++++.+.....++.++.|+|+|+||
T Consensus 164 ~~i~T~~~LL~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IM 243 (678)
T KOG1180|consen 164 TAIFTDSELLPKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIM 243 (678)
T ss_pred eEEEeCHHHHHHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEE
Confidence 9999999999999988899999999999996443222 112346789999999999998887777788999999999
Q ss_pred ecCCCCCCcceeeechHHHHHHHHhccccc-ccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCC----Ch-----
Q 005406 263 YTSGTTGTPKGAVLTHGNLISNVAGFSLMV-QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQG----DN----- 332 (698)
Q Consensus 263 ~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~----~~----- 332 (698)
|||||||.||||+++|+|+++.+....... .+.+.|+++.|+||+|++++...+.+++.|+++++.+. |.
T Consensus 244 YTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~ 323 (678)
T KOG1180|consen 244 YTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIK 323 (678)
T ss_pred EcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhc
Confidence 999999999999999999999998877664 78899999999999999999999999999999998651 11
Q ss_pred hhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCc
Q 005406 333 LKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGR 412 (698)
Q Consensus 333 ~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~ 412 (698)
..---++..+|||+|.+||.+|+++.+.+.+++...+.+.+.+|..++..|+..+......+.++|.++|+++|..+|++
T Consensus 324 kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~ 403 (678)
T KOG1180|consen 324 KGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGN 403 (678)
T ss_pred cCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCc
Confidence 11223678899999999999999999999999999999999999999999999998877888999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCC
Q 005406 413 VRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHP 492 (698)
Q Consensus 413 lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~ 492 (698)
||++++||+|++++..+|+..+++|++.++||.||+++..+...+.+...|.+|.|+++++++++|.++++|...+.| |
T Consensus 404 lR~~LsGGapLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~P-P 482 (678)
T KOG1180|consen 404 LRYILSGGAPLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKP-P 482 (678)
T ss_pred eEEEEeCCCCCCHHHHHHHHHhccccccccccccchhcccEecChhhcccccccCCccceEEEEEEhhhcCccCCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998 8
Q ss_pred ccEEEEeCCCccccccCChhhhcccccC-CC--ceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCc
Q 005406 493 RGEICVRGPIVFQGYYKNEVQTREVIDG-DG--WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCK 569 (698)
Q Consensus 493 ~GEl~v~g~~~~~GY~~~~~~t~~~f~~-~g--w~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p 569 (698)
+|||||+|+++..|||+||+.|++.|.. +| ||+|||+|++.+||.|.|+||+||++|+.+||||+++.||++|+.+|
T Consensus 483 rGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p 562 (678)
T KOG1180|consen 483 RGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSP 562 (678)
T ss_pred CceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCc
Confidence 9999999999999999999999999977 88 99999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEec
Q 005406 570 FVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMP 649 (698)
Q Consensus 570 ~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~ 649 (698)
.|..++|++++....+||+|||+...+..|+.+.|++..+++++|++.++.+++.++|.+.+++.+|.++++|..|++.+
T Consensus 563 ~V~NICvyAd~~~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~ 642 (678)
T KOG1180|consen 563 YVDNICVYADSNKSKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSP 642 (678)
T ss_pred chhheEEecccccceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecC
Confidence 99999999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccCcccCCChHHHHHHHHHHHHHHHhc
Q 005406 650 EPFSVENGLLTPTFKIKRPQAKERFAKAISNMYAE 684 (698)
Q Consensus 650 ~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly~~ 684 (698)
+++|.|||++|+..|++|+.++..|+++|+++|++
T Consensus 643 e~WTPenGlvT~A~KLKRk~I~~~~k~ei~~~Y~~ 677 (678)
T KOG1180|consen 643 EPWTPENGLVTAALKLKRKEILAAYKKEIDRLYKE 677 (678)
T ss_pred CCcCCCccccHHHHHhhHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999986
No 3
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6.7e-100 Score=870.82 Aligned_cols=648 Identities=81% Similarity=1.353 Sum_probs=579.3
Q ss_pred ccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHH
Q 005406 38 VQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYG 117 (698)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~ 117 (698)
.+.+.||++++++.+.+.+.+||+...+..+.+++++.+...|++++|+++++++|+++|++.+...++..++++++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~ 82 (651)
T PLN02736 3 VHEQGYSVVLPEKLQTGKWNVYRSARSPLKLVSRFPDHPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYG 82 (651)
T ss_pred ccccCcceeCCCCCCCCCCCeecCccccccccccCCCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHH
Confidence 34567999999999999999999988888888777677788999999999999999999997652123333457889999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchH
Q 005406 118 EVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLN 197 (698)
Q Consensus 118 el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~ 197 (698)
||.++++++|++|+++|+++||+|+|+++|++||+++++||+++|+++||++++++.+++.+++++++++++|++.+...
T Consensus 83 el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~ 162 (651)
T PLN02736 83 EAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLN 162 (651)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred HHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeec
Q 005406 198 TLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLT 277 (698)
Q Consensus 198 ~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~t 277 (698)
.+......++.++.+++.+.............+....+|++++..+...+.+.....++++++|+|||||||.||||++|
T Consensus 163 ~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~ls 242 (651)
T PLN02736 163 TLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLT 242 (651)
T ss_pred HHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEe
Confidence 77776667788888887754221111111123456778998887554332333445789999999999999999999999
Q ss_pred hHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 278 HGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 278 h~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
|+++++.+.+....+++.++|++++++|++|++++...+.+++.|+++++.++++..+++.|++++||+++++|++|..+
T Consensus 243 h~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l 322 (651)
T PLN02736 243 HGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDDLAALRPTIFCSVPRLYNRI 322 (651)
T ss_pred cHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEecchHHHHHH
Confidence 99999998888777888999999999999999999888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCC
Q 005406 358 YAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC 437 (698)
Q Consensus 358 ~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~ 437 (698)
.+.+...+...+.+++.++..++..+...+..+..+...++.+++++++..+|+++|.+++||+++++++.++++..+|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~ 402 (651)
T PLN02736 323 YDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGG 402 (651)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCC
Confidence 99998888889999999999999988877777767777889999999999999999999999999999999999988999
Q ss_pred ceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhccc
Q 005406 438 QVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREV 517 (698)
Q Consensus 438 ~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~ 517 (698)
+++++||+||+++.++.....+...+++|+|+|+++++|+|.+++.+...+.+++.|||+++||++|.|||++|+.|++.
T Consensus 403 ~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~ 482 (651)
T PLN02736 403 RVLEGYGMTETSCVISGMDEGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREV 482 (651)
T ss_pred CeEEEechHHhchheeccCCCCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhh
Confidence 99999999999877766666566778999999999999999776666666666678999999999999999999999999
Q ss_pred ccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHH
Q 005406 518 IDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLK 597 (698)
Q Consensus 518 f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~ 597 (698)
|+.+|||+|||+|++|+||+|+|+||+||+||+++|++|+|.|||++|.+||+|.+|+|+|+..++.++|+|+++++.+.
T Consensus 483 ~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~~~A~vv~~~~~~~ 562 (651)
T PLN02736 483 IDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSLNSSLVAVVVVDPEVLK 562 (651)
T ss_pred hccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEecCCCceeEEEEEeCHHHHH
Confidence 98899999999999999999999999999999878999999999999999999999999998778899999999999999
Q ss_pred HHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 598 DWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
.|.+..+++..++.++|+++++++.+.++|++.+++.+|++|++|++|++++++|+++||++|++||++|+++++.|+++
T Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~ 642 (651)
T PLN02736 563 AWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKA 642 (651)
T ss_pred HHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHH
Confidence 99998888767889999999999999999999988789999999999999999999999999999999999999999999
Q ss_pred HHHHHhcc
Q 005406 678 ISNMYAEL 685 (698)
Q Consensus 678 i~~ly~~~ 685 (698)
|++||++.
T Consensus 643 i~~~y~~~ 650 (651)
T PLN02736 643 ISDMYAEL 650 (651)
T ss_pred HHHHHhhc
Confidence 99999875
No 4
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.6e-97 Score=852.91 Aligned_cols=638 Identities=36% Similarity=0.643 Sum_probs=553.9
Q ss_pred CCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeec--------CC------
Q 005406 41 QGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRV--------DG------ 106 (698)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~--------~~------ 106 (698)
.+++++++....++ .+|||+... .+... +.+...|+.++|+++++++||++|++++... ++
T Consensus 25 ~~~~~~~~~~~~~~--~~~r~~~~~-~~~~~--~~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~ 99 (696)
T PLN02387 25 KKRGVPVDVGGEPG--YAIRNARFP-ELVET--PWEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKL 99 (696)
T ss_pred ccceecCCCCCCCC--CceecCccc-ccccc--CCCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccc
Confidence 45788888555444 359999855 44433 2457889999999999999999999876321 22
Q ss_pred ccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccc
Q 005406 107 TVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEI 186 (698)
Q Consensus 107 ~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~ 186 (698)
..++|+++||+|++++++++|++|.++|+++||+|+|+++|++||+++++||+++|+++|||+++++++++.++|+++++
T Consensus 100 ~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~ 179 (696)
T PLN02387 100 HLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEV 179 (696)
T ss_pred cCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCC
Confidence 12568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCC-CCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecC
Q 005406 187 EAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSL-PSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTS 265 (698)
Q Consensus 187 ~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS 265 (698)
+++|++.+....+......++.++.++.+++........ ....++.+.+|+++...+...+.+...+.++|+++|+|||
T Consensus 180 ~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTS 259 (696)
T PLN02387 180 TTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTS 259 (696)
T ss_pred CEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecC
Confidence 999999888777777777778888899887643211100 1223456778999887665433333456789999999999
Q ss_pred CCCCCcceeeechHHHHHHHHhcccc-cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCC----C-----hhhH
Q 005406 266 GTTGTPKGAVLTHGNLISNVAGFSLM-VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQG----D-----NLKL 335 (698)
Q Consensus 266 GTTG~PKgV~~th~~l~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~----~-----~~~l 335 (698)
||||.||||++||+|+++.+...... .++.++|++++++|++|++++...+.+++.|+++.+... + ...+
T Consensus 260 GTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~ 339 (696)
T PLN02387 260 GSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGT 339 (696)
T ss_pred CCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCc
Confidence 99999999999999999888766544 357889999999999999999887777888888876431 1 2345
Q ss_pred HHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC-----CCCchhhHHHHHHHHHHHcC
Q 005406 336 MDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG-----QTPSKMWDRLVFNKIRERLG 410 (698)
Q Consensus 336 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~-----~~~~~~~d~~~~~~~~~~~g 410 (698)
++++++++||+++++|++|+++.+.+...+...+.+++.++..++..+...+... ...+.+||.++|+++++.+|
T Consensus 340 ~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 419 (696)
T PLN02387 340 KGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLG 419 (696)
T ss_pred hhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhC
Confidence 6789999999999999999999999888888888999999999998887765432 23457899999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCC
Q 005406 411 GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQP 490 (698)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~ 490 (698)
+++|.+++||+++++++.++++..+|++++++||+||+++.++.....+...+++|.|+|+++++|+|.+++++...+.+
T Consensus 420 ~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~ 499 (696)
T PLN02387 420 GRIRFMLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKP 499 (696)
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEeechhhcccceeecCcccCCCCccCCCCCceEEEEeeccccCcccCCCC
Confidence 99999999999999999999998889999999999999887776666666778999999999999999888877766666
Q ss_pred CCccEEEEeCCCccccccCChhhhcccc--cCCC--ceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHh
Q 005406 491 HPRGEICVRGPIVFQGYYKNEVQTREVI--DGDG--WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYA 566 (698)
Q Consensus 491 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f--~~~g--w~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~ 566 (698)
++.|||+|+||++|.|||++|+.|+++| +.+| ||+|||+|++|+||+|+|+||+||+||+++|+||+|++||++|.
T Consensus 500 ~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~ 579 (696)
T PLN02387 500 MPRGEIVIGGPSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALS 579 (696)
T ss_pred CCCceEEeccCcccchhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHh
Confidence 6789999999999999999999999998 4455 99999999999999999999999999987899999999999999
Q ss_pred cCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEE
Q 005406 567 KCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVT 646 (698)
Q Consensus 567 ~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~ 646 (698)
+||.|.+|+|+|++.+.+++|+|+|+++.+..|+.+.+++..++.++|+++++++.+.+.+.+.+++.+|++|++|++|+
T Consensus 580 ~~p~V~~~~V~g~~~~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~ 659 (696)
T PLN02387 580 VSPYVDNIMVHADPFHSYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIK 659 (696)
T ss_pred cCCCeeEEEEEecCCcceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEE
Confidence 99999999999998889999999999999999999998877789999999999999999999998888999999999999
Q ss_pred EecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHHh
Q 005406 647 LMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMYA 683 (698)
Q Consensus 647 ~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly~ 683 (698)
+++++||++||++||++|++|+.+++.|+++|++||+
T Consensus 660 l~~~~~t~~~g~lT~t~K~~R~~i~~~y~~~i~~ly~ 696 (696)
T PLN02387 660 LLPEPWTPESGLVTAALKLKREQIRKKFKDDLKKLYE 696 (696)
T ss_pred EECCCCCCCCCcCChhhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999995
No 5
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.2e-96 Score=837.09 Aligned_cols=629 Identities=40% Similarity=0.714 Sum_probs=527.6
Q ss_pred CCcCcccccCCCCccccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHh
Q 005406 53 TGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF 132 (698)
Q Consensus 53 ~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~ 132 (698)
+.++++||++.....+.. +.+...|+.++|+++++++||++|++++...++..+.++++||+||+++++++|++|++
T Consensus 22 ~~~~~~~~~~~~~~~~~~---~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~ 98 (666)
T PLN02614 22 PSVGPVYRSIFAKDGFPN---PIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS 98 (666)
T ss_pred CCCCCcccCcccccccCC---CCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH
Confidence 567888998865555432 24467799999999999999999998652112222446789999999999999999999
Q ss_pred CCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhc-CCceeE
Q 005406 133 HGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISE-IPSVHL 211 (698)
Q Consensus 133 ~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~ 211 (698)
+|+++||+|+|+++|++||+++++||+++|+++||++++++.+++.+++++++++++|++.+....+...... .+.++.
T Consensus 99 ~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~ 178 (666)
T PLN02614 99 VGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKT 178 (666)
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceE
Confidence 9999999999999999999999999999999999999999999999999999999999987655544333222 233666
Q ss_pred EEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc
Q 005406 212 IVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM 291 (698)
Q Consensus 212 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~ 291 (698)
++.+++............+..+.++++++..+.....+.....++|+++|+|||||||.||||++||+|+++.+......
T Consensus 179 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~ 258 (666)
T PLN02614 179 VVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRL 258 (666)
T ss_pred EEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhh
Confidence 77765421110000111244567888887654322222233568999999999999999999999999999877654433
Q ss_pred c-----ccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHh
Q 005406 292 V-----QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVK 366 (698)
Q Consensus 292 ~-----~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 366 (698)
+ ++.++|++++++|++|++++...+.+++.|+++++.++++..++++|++++||+++++|++|+.++..+...+.
T Consensus 259 ~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~ 338 (666)
T PLN02614 259 LKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLS 338 (666)
T ss_pred ccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHh
Confidence 2 57789999999999999999776677889999999888999999999999999999999999999998888888
Q ss_pred hcchHHHHHHHHHHHHHHHHHHcCCCC---chhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceeccc
Q 005406 367 ASGTLREKLFTAAYNSKKQAIVSGQTP---SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGY 443 (698)
Q Consensus 367 ~~~~~~~~l~~~~~~~k~~~~~~~~~~---~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~Y 443 (698)
..+.+++.++..++..+...+..+... ..+++.++++++++.+|+++|.+++||+++++++.++++...+++++++|
T Consensus 339 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~Y 418 (666)
T PLN02614 339 DGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGY 418 (666)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeC
Confidence 888888899998888776666554322 36778889999999999999999999999999875555443358999999
Q ss_pred CcchhcchhcccCCCC-CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCC
Q 005406 444 GMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDG 522 (698)
Q Consensus 444 G~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~g 522 (698)
|+||+++.++...+.+ ...+++|+|+|+++++|+|++++++.+ ..+++.|||+|+||++|.|||++|+.|++.| .+|
T Consensus 419 G~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~-~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dG 496 (666)
T PLN02614 419 GLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDA-LASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDG 496 (666)
T ss_pred chHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCccc-CCCCCCceEEEcCCcccccccCCHHHhhhhh-ccC
Confidence 9999986555444433 356899999999999999965543221 2234589999999999999999999999999 589
Q ss_pred ceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHHH
Q 005406 523 WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAAS 602 (698)
Q Consensus 523 w~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~ 602 (698)
||+|||+|++|+||+|+|+||+||+||+++|+||+|.|||++|.+||+|.+|+|+|++.+.+++|+|+|+.+.+..|+.+
T Consensus 497 w~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~~l~alvv~~~~~~~~~~~~ 576 (666)
T PLN02614 497 WLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFESFLVAIANPNQQILERWAAE 576 (666)
T ss_pred CcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCcceEEEEEeCCHHHHHHHHHh
Confidence 99999999999999999999999999987899999999999999999999999999987889999999999999999999
Q ss_pred cCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHH
Q 005406 603 QGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMY 682 (698)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly 682 (698)
+++. .+..++|+++++++.+.+++.+.+++.+|++|++|++|+++++.||++||++|||+|++|+.+.+.|+++|++||
T Consensus 577 ~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~~ly 655 (666)
T PLN02614 577 NGVS-GDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDEMY 655 (666)
T ss_pred cCCC-cCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHHHHH
Confidence 9887 478899999999999999999998778999999999999999999999999999999999999999999999999
Q ss_pred hcccC
Q 005406 683 AELAT 687 (698)
Q Consensus 683 ~~~~~ 687 (698)
++..+
T Consensus 656 ~~~~~ 660 (666)
T PLN02614 656 KTTNE 660 (666)
T ss_pred Hhhhh
Confidence 97654
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.5e-96 Score=832.69 Aligned_cols=628 Identities=24% Similarity=0.394 Sum_probs=534.9
Q ss_pred CCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHH
Q 005406 41 QGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVS 120 (698)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~ 120 (698)
..|+..++.+....++.+||....... .+.....|+.++|.++++++|+++|+... .++ ..++++||+|+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~~~~~p~~~Al~~~--~~g--~~~~~~Ty~el~ 98 (746)
T PTZ00342 28 KGYSEICEKATNENESSVYCMKDHKKK-----SSLYVYKHIMKLLLEKYKLNNNKIAIVEH--SCG--EPQNYITYGNFF 98 (746)
T ss_pred ceeeeEecCCCCCCCCCceecCchhhc-----ccccccchHHHHHHHHHhhcCCceeEecc--CCC--CCceeeeHHHHH
Confidence 458899999888888999998765554 12346789999999999999999999753 011 236889999999
Q ss_pred HHHHHHHHHHHhC---CCCCC-----------CEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccc
Q 005406 121 AARKEIGSGLLFH---GLQKG-----------VRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEI 186 (698)
Q Consensus 121 ~~~~~la~~L~~~---gv~~g-----------~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~ 186 (698)
+++.++|++|.++ |+++| |+|+|+++|++||+++++||+++|+++||++++++.+++.++|+++++
T Consensus 99 ~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~ 178 (746)
T PTZ00342 99 KKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKL 178 (746)
T ss_pred HHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCC
Confidence 9999999999974 99998 899999999999999999999999999999999999999999999999
Q ss_pred eEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCC-----------------CC-------------------------
Q 005406 187 EAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHL-----------------PS------------------------- 224 (698)
Q Consensus 187 ~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-----------------~~------------------------- 224 (698)
+++|++.+..+.+.+....++.++.++++++..... ..
T Consensus 179 ~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (746)
T PTZ00342 179 EWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPL 258 (746)
T ss_pred CEEEEcHHHHHHHHHhhccCCCceEEEEECCCCccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999998888888777777788899999887532110 00
Q ss_pred ---------------CCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcc
Q 005406 225 ---------------LPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFS 289 (698)
Q Consensus 225 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~ 289 (698)
.....+.....|+++.+.... ..+..+..++|+++|+|||||||.||||++||+|+++.+....
T Consensus 259 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~ 337 (746)
T PTZ00342 259 EYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTT-NYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLC 337 (746)
T ss_pred ccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhccc-CCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHh
Confidence 000112344556665543211 2223345789999999999999999999999999998876554
Q ss_pred ccc--ccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhh
Q 005406 290 LMV--QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKA 367 (698)
Q Consensus 290 ~~~--~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 367 (698)
... ...+.|++++++|++|++++...+.+++.|++++++++++..++++|++++||++++||++|++|++.+...+..
T Consensus 338 ~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~ 417 (746)
T PTZ00342 338 KHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINN 417 (746)
T ss_pred hcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhh
Confidence 321 233568999999999999998888889999999999889999999999999999999999999999999888888
Q ss_pred cchHHHHHHHHHHHHHHHHHHcCCCCchhhHHH--HHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCc
Q 005406 368 SGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRL--VFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGM 445 (698)
Q Consensus 368 ~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~--~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~ 445 (698)
.+.+++.++.+++..+..... + ..+.+++.+ +|+++++.+|+++|.+++||+|+++++.++|+..+|++++++||+
T Consensus 418 ~~~~~~~~~~~a~~~~~~~~~-~-~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGl 495 (746)
T PTZ00342 418 LPPLKRFLVKKILSLRKSNNN-G-GFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGL 495 (746)
T ss_pred cCHHHHHHHHHHHHHHHHhhc-C-CcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeecc
Confidence 888999999999988877533 2 244566655 799999999999999999999999999999998899999999999
Q ss_pred chhcchhcccCCCCCCCCCccCCC-CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCce
Q 005406 446 TETSCIISAIDKGDNLSGHVGSPN-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWL 524 (698)
Q Consensus 446 TE~~~~~~~~~~~~~~~~~vG~p~-~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~ 524 (698)
||+++.++...+.+...+++|+|+ |+++++|+|.++..... +.+.|||+++||++|.|||++|+.|+++|+.||||
T Consensus 496 TEt~~~~~~~~~~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~---~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~ 572 (746)
T PTZ00342 496 TETTGPIFVQHADDNNTESIGGPISPNTKYKVRTWETYKATD---TLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYF 572 (746)
T ss_pred CcccceeeeccCCCCCcccccCcCCCcEEEEEecccccccCC---CCCceEEEEecCcccccccCChhhhhhhcCcCCcc
Confidence 999877776666667789999998 99999999866533222 22479999999999999999999999999889999
Q ss_pred ecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHcC
Q 005406 525 HTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQG 604 (698)
Q Consensus 525 ~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~ 604 (698)
+|||+|++|+||+|+|+||+||+||+++|+||+|.+||++|.+||.|.+|+|+|++...+++|+|+|+++.+..|+++.+
T Consensus 573 ~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~~~~~Alvv~d~~~~~~~a~~~~ 652 (746)
T PTZ00342 573 KTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDDSMDGPLAIISVDKYLLFKCLKDDN 652 (746)
T ss_pred cCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccCCccccEEEEECCHHHHHHHHHhcC
Confidence 99999999999999999999999998899999999999999999999999999987678999999999999999998753
Q ss_pred ------CCcccHHH-----hhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHH
Q 005406 605 ------IKFEDLEQ-----LCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKER 673 (698)
Q Consensus 605 ------~~~~~~~~-----~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~ 673 (698)
+....+.+ .|+++++.+.+.+++.+..++.+|++|+++++|+++++.||+ +|++|||.|++|+.+.+.
T Consensus 653 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~-~~~lTpt~KlkR~~v~~~ 731 (746)
T PTZ00342 653 MLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDT-NNYLTPTFKVKRFYVFKD 731 (746)
T ss_pred CccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCC-CCccChhhhhhHHHHHHH
Confidence 33234444 556778899999999999887899999999999999999999 679999999999999999
Q ss_pred HH---HHHHHHHhc
Q 005406 674 FA---KAISNMYAE 684 (698)
Q Consensus 674 ~~---~~i~~ly~~ 684 (698)
|+ +.|++||.+
T Consensus 732 y~~~i~~i~~~y~~ 745 (746)
T PTZ00342 732 YAFFIDQVKKIYKN 745 (746)
T ss_pred HHHHHHHHHHHhcC
Confidence 99 777888864
No 7
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.3e-95 Score=828.82 Aligned_cols=626 Identities=43% Similarity=0.733 Sum_probs=533.9
Q ss_pred CCcCcccccCCCCccccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHh
Q 005406 53 TGKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF 132 (698)
Q Consensus 53 ~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~ 132 (698)
++++++||++...+.+... .+...|++++|.++++++|+++|++.+...++..++++++||+||.++++++|++|.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~---~~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~ 96 (660)
T PLN02861 20 PSAGPVYRSIYAKDGLLDL---PADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS 96 (660)
T ss_pred CCCCCcccccccccccccC---CCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH
Confidence 5678899999877766543 3567899999999999999999998753223334567889999999999999999999
Q ss_pred CCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCC-ceeE
Q 005406 133 HGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIP-SVHL 211 (698)
Q Consensus 133 ~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~ 211 (698)
+|+++||+|+|+++|++||+++++||+++|+++|||+++++.+++.+++++++++++|++.+....+......++ .++.
T Consensus 97 ~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ 176 (660)
T PLN02861 97 RGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKT 176 (660)
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEE
Confidence 999999999999999999999999999999999999999999999999999999999998776665555444443 5777
Q ss_pred EEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc
Q 005406 212 IVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM 291 (698)
Q Consensus 212 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~ 291 (698)
++.+++............+....+|+++...+... ....+..++|+++|+|||||||.||||++||+++++.+......
T Consensus 177 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~ 255 (660)
T PLN02861 177 IVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSLD-CELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHL 255 (660)
T ss_pred EEEECCCChhhhhhhhcCCcEEEEHHHHHHhCccc-CCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhc
Confidence 77776432111001111234567888887654321 12234568999999999999999999999999999887665443
Q ss_pred cc-----cCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHh
Q 005406 292 VQ-----FYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVK 366 (698)
Q Consensus 292 ~~-----~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 366 (698)
++ +.++|++++++|++|++++...+.+++.|+++++.++++..++++|++++||+++++|++|+.+++.+...+.
T Consensus 256 ~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~ 335 (660)
T PLN02861 256 LKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKIS 335 (660)
T ss_pred cccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHh
Confidence 33 4688999999999999998877778999999999888999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHHHHHHHHHHHHcCCCC---chhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC-Cceecc
Q 005406 367 ASGTLREKLFTAAYNSKKQAIVSGQTP---SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEG 442 (698)
Q Consensus 367 ~~~~~~~~l~~~~~~~k~~~~~~~~~~---~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g-~~l~~~ 442 (698)
..+.+++.++.+++..+...+..+... .+.++.++|+++++.+|+++|.+++||+++++++.++++ .++ ..++++
T Consensus 336 ~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~-~~~~~~l~~~ 414 (660)
T PLN02861 336 SGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLR-VTSCSVLSQG 414 (660)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHH-HHcCCCeeEe
Confidence 999999999999999888877654322 356788899999999999999999999999999876554 455 479999
Q ss_pred cCcchhcchhcccCCCC-CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCC
Q 005406 443 YGMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGD 521 (698)
Q Consensus 443 YG~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~ 521 (698)
||+||+++.++.....+ ...+++|+|+|+++++|+|.+++++... .+++.|||+|+||+++.|||++|+.|++.| .+
T Consensus 415 YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~-~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~d 492 (660)
T PLN02861 415 YGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDAL-SDVPRGEICLRGNTLFSGYHKRQDLTEEVL-ID 492 (660)
T ss_pred cchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccC-CCCCceeEEEcCCcccccccCCHHHHHhhh-hc
Confidence 99999987655443332 3568999999999999999655443221 233589999999999999999999999999 58
Q ss_pred CceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHH
Q 005406 522 GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAA 601 (698)
Q Consensus 522 gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~ 601 (698)
|||+|||+|++|+||+|+|+||+||+||+++|++|+|.+||++|.+||.|.+|+|+|.+.++.++|+|+++.+.+..|+.
T Consensus 493 Gw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~~~~~~A~vv~~~~~l~~~~~ 572 (660)
T PLN02861 493 GWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSFESFLVAVVVPDRQALEDWAA 572 (660)
T ss_pred cCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCCcceeEEEEEcCHHHHHHHHH
Confidence 99999999999999999999999999998789999999999999999999999999998778999999999999999999
Q ss_pred HcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHH
Q 005406 602 SQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNM 681 (698)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~l 681 (698)
+.++. ..+.++|++.+.+..+.+++++.+++.+|+.|++++.|+++++.||++||++|+++|++|+++.+.|+++|++|
T Consensus 573 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~l 651 (660)
T PLN02861 573 NNNKT-GDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQL 651 (660)
T ss_pred HcCCC-CCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHHH
Confidence 88764 46788999999999999999999987789999999999999999999999999999999999999999999999
Q ss_pred Hhccc
Q 005406 682 YAELA 686 (698)
Q Consensus 682 y~~~~ 686 (698)
|++..
T Consensus 652 Y~~~~ 656 (660)
T PLN02861 652 YSEAK 656 (660)
T ss_pred HHhhh
Confidence 99754
No 8
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=8.5e-95 Score=825.49 Aligned_cols=628 Identities=43% Similarity=0.695 Sum_probs=541.1
Q ss_pred CcCcccccCCCCccccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhC
Q 005406 54 GKWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH 133 (698)
Q Consensus 54 ~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~ 133 (698)
.++++||++...+.+.. ..++..|++++|.+.++++|+++|++.+...++..++++|+||+|+.+++.++|++|.+.
T Consensus 20 ~~~~~~~~~~~~~~~~~---~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~ 96 (660)
T PLN02430 20 SVGPVYRNLLSKKGFPP---IDSDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRAS 96 (660)
T ss_pred CCCCccccccccccccC---CCCCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHc
Confidence 37899999876655432 245789999999999999999999987632234445678899999999999999999999
Q ss_pred CCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHH-HHhhhhcCCceeEE
Q 005406 134 GLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNT-LLSFISEIPSVHLI 212 (698)
Q Consensus 134 gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~i 212 (698)
|+++||+|+|+++|++||+++++||+++|+++||++++++++++.+++++++++++|++...... +.......+.++.+
T Consensus 97 Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~i 176 (660)
T PLN02430 97 GAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAI 176 (660)
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999998764332 22222335567788
Q ss_pred EEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc-
Q 005406 213 VVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM- 291 (698)
Q Consensus 213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~- 291 (698)
|.+++............+...++|++++..+...+....+..|+|+++|+|||||||.||||++||+|+++.+......
T Consensus 177 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~ 256 (660)
T PLN02430 177 VSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFM 256 (660)
T ss_pred EEECCCChHHhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhc
Confidence 8876532211111112345667899988766443333344578999999999999999999999999999877654321
Q ss_pred ----cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhh
Q 005406 292 ----VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKA 367 (698)
Q Consensus 292 ----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 367 (698)
.+++++|++++++|++|++++...+.+++.|++++++..++..+++++++++||++.++|++|+++.+.+...+..
T Consensus 257 ~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~ 336 (660)
T PLN02430 257 EQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQE 336 (660)
T ss_pred cccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhc
Confidence 2567899999999999999998877788999999998889999999999999999999999999999999888888
Q ss_pred cchHHHHHHHHHHHHHHHHHHcCCC---CchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccC
Q 005406 368 SGTLREKLFTAAYNSKKQAIVSGQT---PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYG 444 (698)
Q Consensus 368 ~~~~~~~l~~~~~~~k~~~~~~~~~---~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG 444 (698)
.+.+++.++..++..|...+..+.. .+.++|.++|+++++.+|+++|.+++||+++++++.++++...++.++++||
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG 416 (660)
T PLN02430 337 LNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYG 416 (660)
T ss_pred cCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecc
Confidence 8889999999999999888766542 3467899999999999999999999999999999988877654578999999
Q ss_pred cchhcchhcccCCCC-CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCc
Q 005406 445 MTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGW 523 (698)
Q Consensus 445 ~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw 523 (698)
+||+++.++...+.+ ...+++|+|.++++++++|++++++.+.+. ++.|||+|+||+++.|||++|+.|++.| .+||
T Consensus 417 ~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~-~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~dGw 494 (660)
T PLN02430 417 LTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGE-PPRGEICVRGKCLFSGYYKNPELTEEVM-KDGW 494 (660)
T ss_pred hhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCC-CCcceEEecCCCccccccCChHHhhhhh-hccc
Confidence 999987766654443 457899999999999999877766554433 2479999999999999999999999999 6999
Q ss_pred eecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHc
Q 005406 524 LHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQ 603 (698)
Q Consensus 524 ~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~ 603 (698)
|+|||+|++|+||+|+|+||+||+||+++|++|+|++||++|.+||.|.+|+|+|++.+++++|+|+|+++.+..|+...
T Consensus 495 ~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~~~~~~~A~vv~~~~~~~~~~~~~ 574 (660)
T PLN02430 495 FHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDSFKSMLVAVVVPNEENTNKWAKDN 574 (660)
T ss_pred eeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecCCcceEEEEEEcCHHHHHHHHHhC
Confidence 99999999999999999999999999888999999999999999999999999998777899999999999999999988
Q ss_pred CCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHHh
Q 005406 604 GIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMYA 683 (698)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly~ 683 (698)
++. ....++|+++++++.+.+++.+.+++.+|++|+++++|+++++.||++||++|||+|++|+.+.+.|+++|++||+
T Consensus 575 ~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ly~ 653 (660)
T PLN02430 575 GFT-GSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEIDEMYR 653 (660)
T ss_pred CCC-CCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHHHHHHH
Confidence 876 5678899999999999999999987788999999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 005406 684 ELAT 687 (698)
Q Consensus 684 ~~~~ 687 (698)
+...
T Consensus 654 ~~~~ 657 (660)
T PLN02430 654 KLAE 657 (660)
T ss_pred hhhh
Confidence 7654
No 9
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1e-93 Score=774.56 Aligned_cols=584 Identities=39% Similarity=0.640 Sum_probs=503.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...++..++.+.++.+|+.+++... ..+.++.+||+|+.+++.++|++|++.|++.||+|+|++.|++||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~ 88 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYK-----ELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADL 88 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeee-----cCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 4577899999999999998888765 24668999999999999999999999999779999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchH-HHHhhhhcCCceeEEEEeCC----CCC-CCCCCCCCCC
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLN-TLLSFISEIPSVHLIVVVGG----KDE-HLPSLPSTSG 230 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~ii~~~~----~~~-~~~~~~~~~~ 230 (698)
||+.+|++.||++++.+++++.|+|++++++++|++..... .+......++.+..++...+ ... ..........
T Consensus 89 a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (613)
T COG1022 89 AILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPD 168 (613)
T ss_pred HHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhcccccccc
Confidence 99999999999999999999999999999999999985543 34434443333222221111 000 0000000011
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccc-cCCCcEEEEcCChhhH
Q 005406 231 VKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ-FYPSDIYMSYLPLAHI 309 (698)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~h~ 309 (698)
.....+ .+.... ......+..+||+|.|+|||||||.|||||+||+|+++++........ ++++|++++++|++|+
T Consensus 169 ~~~~~~-~~~~~~--~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi 245 (613)
T COG1022 169 EGISLF-LIDSAG--LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHI 245 (613)
T ss_pred ccchhh-hhcccc--cccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHH
Confidence 111111 111111 111224678999999999999999999999999999999999998886 8999999999999999
Q ss_pred HHHHHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005406 310 YERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (698)
Q Consensus 310 ~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (698)
+++.+.......|+...++..++..+.+++++++||++++||++|+.+.+.+.+++.+.+..++.+|.+++..+......
T Consensus 246 ~Er~~~~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~ 325 (613)
T COG1022 246 FERAFEGGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISR 325 (613)
T ss_pred HHHHHHHHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh
Confidence 99998655555566666677899999999999999999999999999999999999999999999999999877543322
Q ss_pred ----CCCCc--hhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCC
Q 005406 390 ----GQTPS--KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSG 463 (698)
Q Consensus 390 ----~~~~~--~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~ 463 (698)
+.... ...|+++|+|+++.+|+++|++++||+++++++..+++. .|+++.++||+|||++++++.++.+...+
T Consensus 326 ~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~-lGi~i~eGYGlTEts~~~~v~~~~~~~~g 404 (613)
T COG1022 326 ALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRS-LGIPILEGYGLTETSAVVSVNPPDRFVLG 404 (613)
T ss_pred hhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHH-cCCCeEEEecccccccceEEccccCcccC
Confidence 22222 357999999999999999999999999999999999998 48999999999999999999999999999
Q ss_pred CccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEcc
Q 005406 464 HVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDR 543 (698)
Q Consensus 464 ~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR 543 (698)
++|.|+|++|+||+| .|||+||||++|+|||++|++|+++|++||||+|||+|.+|++|+|+|+||
T Consensus 405 tvG~p~p~~evKI~d--------------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gR 470 (613)
T COG1022 405 TVGKPLPGIEVKIAD--------------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGR 470 (613)
T ss_pred CcCCcCCCceEEEcc--------------CceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeec
Confidence 999999999999999 699999999999999999999999999999999999999999999999999
Q ss_pred CCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHcCCC-cccHHHhhCCHHHHHH
Q 005406 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIK-FEDLEQLCNDPRARAA 622 (698)
Q Consensus 544 ~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 622 (698)
+||+||+++|+||+|+.||+.+.++|.|.+++|+| +++.+++|+|+|+.+.+..|+...+.. ..+..+++.++++.+.
T Consensus 471 kK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~k~~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~ 549 (613)
T COG1022 471 KKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DDKKFLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKL 549 (613)
T ss_pred ccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cCCcceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHH
Confidence 99999999999999999999999999999999999 668999999999999999999887743 3678899999999999
Q ss_pred HHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHHhccc
Q 005406 623 VLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMYAELA 686 (698)
Q Consensus 623 i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly~~~~ 686 (698)
+..++....+ .+..++.++++.+.++.++.++|.+|++.|++|+.+.+.|+++|+.+|.+..
T Consensus 550 ~~~~i~~~~~--~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i~~~y~~~~ 611 (613)
T COG1022 550 ILPRVNKGNK--RLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEIEAVYSRQS 611 (613)
T ss_pred HHHHHHHHhh--cccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHHHHHhhccc
Confidence 9999999874 5589999999999999999999999999999999999999999999999754
No 10
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.1e-92 Score=809.53 Aligned_cols=629 Identities=32% Similarity=0.549 Sum_probs=536.9
Q ss_pred CCceEEcCCCCCCCcCcccccCCCCc----cccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEee----------cCC
Q 005406 41 QGYSVRLPEKLQTGKWNVYRSARSPL----TLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVR----------VDG 106 (698)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~----------~~~ 106 (698)
..|++++++......+++||++.... .+.. ..+...|++++|.++++++||++|++++.. .++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~ 106 (700)
T PTZ00216 30 GPQNVPVPGTETENASAIYRIAGVTDEEHERLRN---EWYYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADG 106 (700)
T ss_pred CCcceecCCCCCCCCCCcccCcccccchhccccc---ccCCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCC
Confidence 46889999888888899999976443 2222 234567999999999999999999998621 012
Q ss_pred c--------cCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHH
Q 005406 107 T--------VGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVK 178 (698)
Q Consensus 107 ~--------~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~ 178 (698)
. .++++++||+||.++++++|++|.++|+++||+|+|+++|++||+++++||+++|++++|+++.++++++.
T Consensus 107 ~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~ 186 (700)
T PTZ00216 107 KERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALA 186 (700)
T ss_pred ccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHH
Confidence 1 13578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEecccchHHHHhhhhc--CCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCC--CCCC-CCCCC
Q 005406 179 YVVNHAEIEAIFCIPQTLNTLLSFISE--IPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGC--SSPQ-PFCPP 253 (698)
Q Consensus 179 ~il~~~~~~~v~~~~~~~~~~~~~~~~--~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~ 253 (698)
+++++++++++|++......+...... .+.. .++.+++.... ....+...++|++++..+. .... ...+.
T Consensus 187 ~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~-~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (700)
T PTZ00216 187 YALRETECKAIVCNGKNVPNLLRLMKSGGMPNT-TIIYLDSLPAS----VDTEGCRLVAWTDVVAKGHSAGSHHPLNIPE 261 (700)
T ss_pred hhhhccCccEEEECHHHHHHHHHhhhhccCCce-EEEEECCCccc----cccCCceEEEHHHHHHhCCccccccccCCCC
Confidence 999999999999987766555444332 2333 45555542211 1223556789999887652 1111 12345
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccccc-----ccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEe
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMV-----QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY 328 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~ 328 (698)
.++|+++|+|||||||.||||++||+|+++.+.+....+ .+.++|++++++|++|++++......++.|+++++
T Consensus 262 ~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~- 340 (700)
T PTZ00216 262 NNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGF- 340 (700)
T ss_pred CcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEE-
Confidence 789999999999999999999999999998877654432 24678999999999999998876667888888776
Q ss_pred CCChhhHHH-------HHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHH
Q 005406 329 QGDNLKLMD-------DLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLV 401 (698)
Q Consensus 329 ~~~~~~l~~-------~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~ 401 (698)
.++..+.+ ++++++||++.++|++|+.+.+.+...+...+.+++++|..++..+...+..+. ..++++.++
T Consensus 341 -~~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~v 418 (700)
T PTZ00216 341 -GSPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGK-DTPYWNEKV 418 (700)
T ss_pred -CCHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCC-CCchHHHHH
Confidence 45666655 789999999999999999999999888888889999999999998887776543 346789999
Q ss_pred HHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCC
Q 005406 402 FNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPE 481 (698)
Q Consensus 402 ~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~ 481 (698)
|++++..+|+++|.+++||+++++++.++++..++ +++++||+||+++.++.....+...+++|+|++|++++|+|.++
T Consensus 419 ~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~~~~~svG~p~~g~evkI~d~~~ 497 (700)
T PTZ00216 419 FSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG-MVIQGWGLTETVCCGGIQRTGDLEPNAVGQLLKGVEMKLLDTEE 497 (700)
T ss_pred HHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-hHhhccCcccccccccccCCCCCCCCCcCCcCCCeEEEEeechh
Confidence 99999999999999999999999999999988778 99999999999877766666666778999999999999999654
Q ss_pred CCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHH
Q 005406 482 MNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKI 561 (698)
Q Consensus 482 ~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eI 561 (698)
.. ....+++.|||+|+||+++.|||++|+.|++.|+.+|||+|||+|++|+||+|+|+||+||+||+++|++|+|++|
T Consensus 498 ~~--~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eI 575 (700)
T PTZ00216 498 YK--HTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEAL 575 (700)
T ss_pred hc--cCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHH
Confidence 22 2234445899999999999999999999999999999999999999999999999999999999669999999999
Q ss_pred HHHHhcCcCcee--EEEEEcCCCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCc
Q 005406 562 ENVYAKCKFVLQ--CFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGF 639 (698)
Q Consensus 562 E~~l~~~p~V~~--~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~ 639 (698)
|++|.+||.|.+ ++|++.++..+++|+|+++.+.+..|+.++++. .++.++|+++++++.+.+++++..++.+|.+|
T Consensus 576 E~~l~~~p~V~~~~~~v~~~~~~~~l~a~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 654 (700)
T PTZ00216 576 EALYGQNELVVPNGVCVLVHPARSYICALVLTDEAKAMAFAKEHGIE-GEYPAILKDPEFQKKATESLQETARAAGRKSF 654 (700)
T ss_pred HHHHhcCcCcccceEEEEEecCCceEEEEEecCHHHHHHHHHHcCCC-CCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999997 567776778999999999999999999998876 67889999999999999999999988899999
Q ss_pred ceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHHhc
Q 005406 640 EYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMYAE 684 (698)
Q Consensus 640 ~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly~~ 684 (698)
++|++|+++++.||++||++|||+|++|+++.+.|+++|++||++
T Consensus 655 e~i~~~~~~~~~f~~~~g~lT~t~K~~R~~i~~~y~~~i~~ly~~ 699 (700)
T PTZ00216 655 EIVRHVRVLSDEWTPENGVLTAAMKLKRRVIDERYADLIKELFAD 699 (700)
T ss_pred eeEeEEEEECCCCCCCCCCCChhhccchHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999985
No 11
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=2.9e-80 Score=616.96 Aligned_cols=554 Identities=23% Similarity=0.314 Sum_probs=458.4
Q ss_pred hHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHHH
Q 005406 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (698)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (698)
+-++.+++.+|+++.+-+...+-+..+-.--. +..|-..-..-. =...|+.+
T Consensus 3 ~~~~~~~~~~l~~~~a~~s~~~i~~~~~~~~~--------------------~~~~~~g~~~ip--------l~~~Tigq 54 (596)
T KOG1177|consen 3 SLLQTISAYVLRQRSAFFSTFCISTNGWVLLS--------------------SHRYVHGCSQIP--------LDSETIGQ 54 (596)
T ss_pred hhhhhhHHHHHHHHHhhcccccccccCceecc--------------------cccccCCCCCCC--------cccccHHH
Confidence 56788999999999988754443322221000 000111111001 14579999
Q ss_pred HHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005406 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (698)
Q Consensus 84 ~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~ 163 (698)
+++..+++.||+.|+++.. .+ .++||+|+...++++|++|.++|+++||+|+|+.+|+.+|+...|||.++|.
T Consensus 55 ~l~~~t~~v~dkea~Vf~~--eg-----~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~ 127 (596)
T KOG1177|consen 55 LLETTTERVPDKEAAVFDH--EG-----IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGL 127 (596)
T ss_pred HHHHHhhccCcceEEEEee--cc-----chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhce
Confidence 9999999999999998851 22 3489999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhccceEEEecccc-----hHHHHhhhh-------------cCCceeEEEEeCCCCCCCCCC
Q 005406 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT-----LNTLLSFIS-------------EIPSVHLIVVVGGKDEHLPSL 225 (698)
Q Consensus 164 ~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~-----~~~~~~~~~-------------~~~~~~~ii~~~~~~~~~~~~ 225 (698)
+.|++||.+..+++++.|++.+++++|+.... .+.+.++.. .+|.+..+|..+++...
T Consensus 128 v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~---- 203 (596)
T KOG1177|consen 128 VLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPL---- 203 (596)
T ss_pred EEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcC----
Confidence 99999999999999999999999999997643 233333332 35667778877643211
Q ss_pred CCCCCceEeeHHHHHhcCCCCCCC-----CCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEE
Q 005406 226 PSTSGVKLISYLQLQSQGCSSPQP-----FCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIY 300 (698)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~ 300 (698)
...+.++|++..+...... .....|||++.|.|||||||.|||+.+||-|++++.......+++...+++
T Consensus 204 -----~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i 278 (596)
T KOG1177|consen 204 -----PGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRI 278 (596)
T ss_pred -----CCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEE
Confidence 1236788888776542221 234578999999999999999999999999999999988888999999999
Q ss_pred EEcCChhhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHH
Q 005406 301 MSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFT 377 (698)
Q Consensus 301 l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~ 377 (698)
.+..|++|.+|... .+.++..|++++|.. +++...++.|.++|+|.++++|++|..|++.....
T Consensus 279 ~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~------------- 345 (596)
T KOG1177|consen 279 CIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQ------------- 345 (596)
T ss_pred EecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhc-------------
Confidence 99999999999666 889999999999976 89999999999999999999999999888631110
Q ss_pred HHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCC-ceecccCcchhcchhcccC
Q 005406 378 AAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAID 456 (698)
Q Consensus 378 ~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~ 456 (698)
..-.+++|.++.||+++|+++++.+...... .+...||+|||+...+...
T Consensus 346 -----------------------------~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~ 396 (596)
T KOG1177|consen 346 -----------------------------QVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSL 396 (596)
T ss_pred -----------------------------cCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeec
Confidence 0011589999999999999999998876654 4889999999998877766
Q ss_pred CCC---CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEe
Q 005406 457 KGD---NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWL 533 (698)
Q Consensus 457 ~~~---~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~ 533 (698)
+.| ....++|..+++.|.+|+| .++...+.+. .||||+||++.+.|||++++.|.+..+.|.||+|||+|.+|
T Consensus 397 ~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~---~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~ 472 (596)
T KOG1177|consen 397 LGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGT---KGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMD 472 (596)
T ss_pred CCCCHHHHHhhhhhccccccccccc-CCCCccccCC---CceEEEEechhheeecCCcccchhhcccccceecCceEEEc
Confidence 655 4567899999999999999 5666566665 69999999999999999999999999999999999999999
Q ss_pred cCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccH
Q 005406 534 PGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDL 610 (698)
Q Consensus 534 ~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~ 610 (698)
++|+++|+||.+|+|+ ++|++|+|.|||+.|.+||.|.++.|+|.++ ++.++|.|-+.+....
T Consensus 473 enG~i~iVGRskdmI~-rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~------------- 538 (596)
T KOG1177|consen 473 ENGTIEIVGRSKDMII-RGGENVYPTELEDFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEG------------- 538 (596)
T ss_pred CCCcEEEEEcccCeEE-eCCcccChHHHHHHHhhCCCeeeEEEEccCCCcccceEEEEEEeeccccc-------------
Confidence 9999999999999999 6999999999999999999999999999775 4788999988774310
Q ss_pred HHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHH
Q 005406 611 EQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAI 678 (698)
Q Consensus 611 ~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i 678 (698)
....++|+++|| .+|.+|++|+.|++++++| +|-+|||+|-+++++.+.++
T Consensus 539 ----------~~t~E~lKa~Ck-~klaHFKiPky~vf~~~FP------lT~tGKIqKFeir~~~k~~l 589 (596)
T KOG1177|consen 539 ----------KTTAETLKAMCK-GKLAHFKIPKYFVFVDEFP------LTTTGKIQKFEIREMSKGHL 589 (596)
T ss_pred ----------cccHHHHHHHHh-cccccccCCcEEEEeccCc------ccccccchhHHHHHHHHhhc
Confidence 134789999998 7799999999999999999 99999999999999998654
No 12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.3e-80 Score=666.09 Aligned_cols=498 Identities=29% Similarity=0.412 Sum_probs=415.9
Q ss_pred HHHHhCCCC-CceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCC--CCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005406 87 YAVENYPDY-KYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHG--LQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (698)
Q Consensus 87 ~~a~~~pd~-~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g--v~~g~~V~i~~~n~~e~~~~~lA~~~~G~ 163 (698)
+.+..++++ +++++. +. ..+.+||+|+++++.++|.+|.++| +++||+|+++++|+++++++++||+..|+
T Consensus 24 ~~~~~~~~~~~~~i~~---~~---~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga 97 (537)
T KOG1176|consen 24 RPAFVYLDRNTSLVYQ---DS---DGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGA 97 (537)
T ss_pred ccccccccCcceEEEe---cC---CCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Confidence 334444444 777665 21 1356999999999999999999876 88999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEee-HHHHHhc
Q 005406 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS-YLQLQSQ 242 (698)
Q Consensus 164 ~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 242 (698)
++.|+||.+.+.++.+.+++++++++|++.+..+.+.++...+. ..++++......... .......+ +.++...
T Consensus 98 ~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~--~~i~~l~~~~~~~~~---~~~~~~~~~~~~~~~~ 172 (537)
T KOG1176|consen 98 VLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA--LKIIVLTGDEGVISI---SDLVEDLDAFEDLMPE 172 (537)
T ss_pred cccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC--CceEEEecccCcccc---ccccccccchhhcccc
Confidence 99999999999999999999999999999999998887776655 334444432111000 00111112 4444433
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHH-HHHh
Q 005406 243 GCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIV-SVYY 321 (698)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~-~l~~ 321 (698)
+.... ..+.+.+|++.|+|||||||.||||++||++++...........+...|+.++.+|++|.+|+...+. .+..
T Consensus 173 ~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~ 250 (537)
T KOG1176|consen 173 GLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAG 250 (537)
T ss_pred CCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhC
Confidence 32222 45567799999999999999999999999999998877666677778999999999999999999777 5556
Q ss_pred CcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHH
Q 005406 322 GVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRL 400 (698)
Q Consensus 322 G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~ 400 (698)
|+++++.+ +++..+++.|++|++|+++++|.++..|.+....
T Consensus 251 ~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~------------------------------------- 293 (537)
T KOG1176|consen 251 GTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIV------------------------------------- 293 (537)
T ss_pred CceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCcc-------------------------------------
Confidence 66666666 6999999999999999999999999999873100
Q ss_pred HHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC-CceecccCcchhcchhcccCCCC-CCCCCccCCCCCcEEEEEe
Q 005406 401 VFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVD 478 (698)
Q Consensus 401 ~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~i~d 478 (698)
.....+++|.+.+||+++++++.+.+++.++ ..+.++||+||+++.++.+...+ ..++++|.++++++.++.+
T Consensus 294 -----~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~ 368 (537)
T KOG1176|consen 294 -----KKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLD 368 (537)
T ss_pred -----CcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEEEeeC
Confidence 0011169999999999999999999999998 88999999999998777766655 4889999999988888877
Q ss_pred cCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecc
Q 005406 479 VPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAP 558 (698)
Q Consensus 479 ~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p 558 (698)
+.+..++.++ .||||+||+++++|||+||++|++.|+++|||||||+|++|+||+|+|+||+||+||. +|++|+|
T Consensus 369 -e~g~~l~~~~---~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~-~G~qv~P 443 (537)
T KOG1176|consen 369 -ETGVSLGPNQ---TGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKY-GGEQVSP 443 (537)
T ss_pred -CCCCCCCCCC---ceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheee-CCEEeCH
Confidence 6666666665 8999999999999999999999999988899999999999999999999999999996 9999999
Q ss_pred hHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCC
Q 005406 559 EKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQ 635 (698)
Q Consensus 559 ~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~ 635 (698)
.|||++|..||.|.||+|+|.++ ++.++|+||.+++. ....++|.++++ ++
T Consensus 444 ~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~-------------------------~lte~di~~~v~-k~ 497 (537)
T KOG1176|consen 444 AEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGS-------------------------TLTEKDIIEYVR-KK 497 (537)
T ss_pred HHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCC-------------------------cCCHHHHHHHHH-hh
Confidence 99999999999999999999765 68999999998732 122677888886 89
Q ss_pred CCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 636 LRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 636 L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
|+.|++|+.++|++++| +|++|||+|+.|+++|.+
T Consensus 498 l~~y~~~~~V~Fvd~lP------Ks~~GKi~R~~lr~~~~~ 532 (537)
T KOG1176|consen 498 LPAYKLPGGVVFVDELP------KTPNGKILRRKLRDIAKK 532 (537)
T ss_pred CChhhccCeEEEeccCC------CCCcchHHHHHHHHHHHh
Confidence 99999999999999999 999999999999999875
No 13
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.2e-75 Score=689.78 Aligned_cols=574 Identities=21% Similarity=0.337 Sum_probs=474.9
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcC
Q 005406 67 TLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLI 146 (698)
Q Consensus 67 ~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~ 146 (698)
.+...+++.+...|+.++|.+.++++|+++|++.+ . ..++++++||+|+.+++.++|++|.++|+++||+|+|+++
T Consensus 415 ~~~~~~~~~~~~~Tl~dll~~~a~~~pd~~al~~~---~-~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~ 490 (1452)
T PTZ00297 415 NLPREYNPLAGVRSLGEMWERSVTRHSTFRCLGQT---S-ESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCE 490 (1452)
T ss_pred hhhhcCCCcccCCCHHHHHHHHHHHCCCCeEEEEe---c-cCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Confidence 34556777888999999999999999999999643 1 1234688999999999999999999999999999999999
Q ss_pred CCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCC-CCCCC
Q 005406 147 NRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDE-HLPSL 225 (698)
Q Consensus 147 n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-~~~~~ 225 (698)
|++||+++++||+++|+++||++++ .+++.+++++++++++|++.+....+.+... +.++.+|++++... .....
T Consensus 491 N~~Ewvia~lA~~~~GaV~VPly~t--~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~--~~Lr~IIv~d~~~~~~~~~~ 566 (1452)
T PTZ00297 491 ASRNIVILEVACALYGFTTLPLVGK--GSTMRTLIDEHKIKVVFADRNSVAAILTCRS--RKLETVVYTHSFYDEDDHAV 566 (1452)
T ss_pred CCHHHHHHHHHHHHcCCEEEeCCCC--HHHHHHHHHhcCCcEEEEchhHHHHHHhhcc--cCCcEEEEECCCcccccccc
Confidence 9999999999999999999999864 6789999999999999999877776665432 36888998864211 10001
Q ss_pred CCCCCceEeeHHHHHhcCCCCCCC-CCCCCCCCeEEEEe---cCCCCCCcceeeechHHHHHHHHhccccc---ccCCCc
Q 005406 226 PSTSGVKLISYLQLQSQGCSSPQP-FCPPKPEDIATICY---TSGTTGTPKGAVLTHGNLISNVAGFSLMV---QFYPSD 298 (698)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~i~~---TSGTTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d 298 (698)
....++.+++|++++..+.....+ ....+++|++.|+| ||||||.||||++||+|+++.+....... ...++|
T Consensus 567 ~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D 646 (1452)
T PTZ00297 567 ARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKH 646 (1452)
T ss_pred cccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCC
Confidence 112245678899999877432221 23347899999996 99999999999999999999988765422 356789
Q ss_pred EEEEcCChhhHHHHHHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHH
Q 005406 299 IYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTA 378 (698)
Q Consensus 299 ~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~ 378 (698)
++++++||+|++++...+.+++.|+++++ +++..++++|++++||++++||++|+++.+.+...+...+.++++++.+
T Consensus 647 ~~Ls~LPLaHI~er~~~~~~l~~G~~I~~--~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~ 724 (1452)
T PTZ00297 647 LMVHFTPFAMLFNRVFVLGLFAHGSAVAT--VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFER 724 (1452)
T ss_pred EEEEechHHHHHHHHHHHHHHHcCCEEEe--CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 99999999999998888888999999976 5789999999999999999999999999999998888888999999999
Q ss_pred HHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCC--CCCHHHHHHHHHHhCCceecccCcchhcchhcccC
Q 005406 379 AYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGAS--PLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAID 456 (698)
Q Consensus 379 ~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~--~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~ 456 (698)
++..|......+...+.++|+++|+++|+.+|+++|.+++||+ +++..+.. ++++..+||+||+. +.+.
T Consensus 725 A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~------~i~i~~g~glTE~~---~~~~ 795 (1452)
T PTZ00297 725 AFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE------HISVCYVPCLREVF---FLPS 795 (1452)
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC------CceEEEecceEEee---eecC
Confidence 9998887777666667899999999999999999999999984 55543332 67899999999953 3344
Q ss_pred CCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCC
Q 005406 457 KGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGG 536 (698)
Q Consensus 457 ~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G 536 (698)
+.+... .|.|+|++++||.+++++.+. + +.|||+++ |++||+.|++.+ +||+ +||
T Consensus 796 ~~~~~~--~G~PlpgvEvKI~~~~E~~~~--~---~~GEIlvr-------~~kdpe~T~e~~--~gW~---------~dG 850 (1452)
T PTZ00297 796 EGVFCV--DGTPAPSLQVDLEPFDEPSDG--A---GIGQLVLA-------KKGEPRRTLPIA--AQWK---------RDR 850 (1452)
T ss_pred CCCccc--CCeecCceEEEEcccccccCC--C---CCCeEEEE-------ECCChHHHHHhh--CcCc---------cCC
Confidence 444433 499999999999987665432 1 37999996 458999999854 5775 699
Q ss_pred cEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHH-HHHHHcCCCc-------c
Q 005406 537 RLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLK-DWAASQGIKF-------E 608 (698)
Q Consensus 537 ~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~-~~~~~~~~~~-------~ 608 (698)
+|+|+||+||+||+++|+||+|+.||++|.++|.|.+++|+|++. ..++|+|+|+.+.+. +|+.++++.. .
T Consensus 851 ~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~-k~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~ 929 (1452)
T PTZ00297 851 TLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPS-RPIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQL 929 (1452)
T ss_pred eEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCC-CceEEEEEeCHHHHHHHHHHHcCCCccccccccC
Confidence 999999999999999999999999999999999999999999874 459999999999999 9999988742 1
Q ss_pred cHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHHhcccC
Q 005406 609 DLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMYAELAT 687 (698)
Q Consensus 609 ~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly~~~~~ 687 (698)
...+++++ ..+.+.+.+++..+.+++.++++++.|+++++.||++||++|||+|++|+.+.++|+++|++||++.++
T Consensus 930 ~~~el~~~--~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie~LY~~~~~ 1006 (1452)
T PTZ00297 930 GWTELVAY--ASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIERFYSDVET 1006 (1452)
T ss_pred CHHHHHHh--HHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHHHHhccccc
Confidence 34455532 233455666555555678999999999999999999999999999999999999999999999997543
No 14
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.9e-75 Score=664.94 Aligned_cols=542 Identities=23% Similarity=0.335 Sum_probs=437.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005406 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (698)
Q Consensus 76 ~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~ 155 (698)
....|+.++|+++++++|+++|+.+. +. .++++++||+||.++++++|++|.+.|+++||+|+|+++|+++|++++
T Consensus 36 ~~~~~l~~~l~~~a~~~p~~~a~~~~---~~-~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 111 (614)
T PRK08180 36 DYPRRLTDRLVHWAQEAPDRVFLAER---GA-DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLA 111 (614)
T ss_pred CcCccHHHHHHHHHHHCCCCceeeec---cC-CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHH
Confidence 35678999999999999999999764 21 234678999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCC-----HHHHHHHHhhccceEEEecccc-hHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCC
Q 005406 156 HACSAYSYISVPLYDTLG-----PDAVKYVVNHAEIEAIFCIPQT-LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTS 229 (698)
Q Consensus 156 lA~~~~G~~~vpl~~~~~-----~~~l~~il~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 229 (698)
+||+++|++++|+++.++ .+++.+++++++++++|++... .......... ...+ ++..+....
T Consensus 112 lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~-~i~~~~~~~--------- 180 (614)
T PRK08180 112 LAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP-ADVE-VVAVRGAVP--------- 180 (614)
T ss_pred HHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc-CCce-EEEecCCCC---------
Confidence 999999999999999998 7999999999999999997542 1111111111 1122 233322100
Q ss_pred CceEeeHHHHHhcCCCCC--CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccC--CCcEEEEcCC
Q 005406 230 GVKLISYLQLQSQGCSSP--QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFY--PSDIYMSYLP 305 (698)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~--~~d~~l~~~p 305 (698)
.....+|+++........ .......++++++|+|||||||.||||++||+++++.+......+++. .++++++++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lP 260 (614)
T PRK08180 181 GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLP 260 (614)
T ss_pred CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecc
Confidence 001245666654321111 111234679999999999999999999999999998887766655553 5689999999
Q ss_pred hhhHHHHHH-HHHHHHhCcEEEEeC--CC---hhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHH
Q 005406 306 LAHIYERAN-QIVSVYYGVAVGFYQ--GD---NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAA 379 (698)
Q Consensus 306 l~h~~~~~~-~~~~l~~G~~~~~~~--~~---~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 379 (698)
++|.+++.. .+.+++.|+++++.+ ++ ...+++.++++++|+++++|++|..|.+.+....
T Consensus 261 l~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~-------------- 326 (614)
T PRK08180 261 WNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDA-------------- 326 (614)
T ss_pred hHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhch--------------
Confidence 999999865 567899999999875 23 3467889999999999999999999887432110
Q ss_pred HHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHH----hC--CceecccCcchhcchhc
Q 005406 380 YNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVC----FG--CQVMEGYGMTETSCIIS 453 (698)
Q Consensus 380 ~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~----~g--~~l~~~YG~TE~~~~~~ 453 (698)
..+...++++|.+++||+++++++.+++.+. +| ++++++||+||++++++
T Consensus 327 ------------------------~~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~ 382 (614)
T PRK08180 327 ------------------------ALRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSAT 382 (614)
T ss_pred ------------------------hhhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceE
Confidence 0111223689999999999999999988874 33 67999999999987766
Q ss_pred ccCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEE-
Q 005406 454 AIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLW- 532 (698)
Q Consensus 454 ~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~- 532 (698)
........++++|+|++|++++|+|. + ..|||+++|++++.|||++|+.|++.|+.+|||+|||+|++
T Consensus 383 ~~~~~~~~~~svG~p~pg~~v~i~d~--------~---~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~ 451 (614)
T PRK08180 383 FTTGPLSRAGNIGLPAPGCEVKLVPV--------G---GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFV 451 (614)
T ss_pred ecccccCCCCcccCccCCcEEEEecC--------C---CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEec
Confidence 55444566789999999999999983 1 26999999999999999999999999988999999999999
Q ss_pred ---ecCCcEEEEccCCCeEecCCceeec--chHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHcCCCc
Q 005406 533 ---LPGGRLKIIDRKKNIFKLAQGEYVA--PEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKF 607 (698)
Q Consensus 533 ---~~~G~l~i~GR~~d~ikls~G~~v~--p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~~~~ 607 (698)
|++|+|+|+||+||+||+++|++|+ |.|+|.++.+||.|.+|+|+|.+ .+.++|+|+++++....|+... ..
T Consensus 452 ~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~-~~~~~a~V~~~~~~~~~~~~~~--~~ 528 (614)
T PRK08180 452 DPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHD-RDEIGLLVFPNLDACRRLAGLL--AD 528 (614)
T ss_pred CCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCC-CCceEEEEEcCHHHHHHHHhhc--cc
Confidence 5689999999999999988899777 78889999999999999999987 4578899999998777776554 11
Q ss_pred ccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHHhcc
Q 005406 608 EDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMYAEL 685 (698)
Q Consensus 608 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly~~~ 685 (698)
....+.++.+++++.+.+.|.++.+ .....+++|++|.+++++|+..+|.+|++||++|+++.+.|+++|++||++.
T Consensus 529 ~~~~~~~~~~~l~~~~~~~l~~~~~-~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~lY~~~ 605 (614)
T PRK08180 529 ASLAEVLAHPAVRAAFRERLARLNA-QATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEALYADE 605 (614)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHh-hccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHHHhCCC
Confidence 2344556788899999998888764 4455677999999999999999999999999999999999999999999864
No 15
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.2e-76 Score=656.57 Aligned_cols=506 Identities=30% Similarity=0.453 Sum_probs=422.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...++.+++.++++.+|+++|+.+. +.. ..+||+||+++++++|++|++.|+++||+|+|+++|+++++++++
T Consensus 9 ~~~~~~~~l~~~a~~~~~~~a~~~~---~~~----~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~ 81 (534)
T COG0318 9 AELTLASLLERAARRNPDRPALIFL---GRG----GRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFL 81 (534)
T ss_pred ccccHHHHHHHHHHhCCCceEEEEc---CCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4678999999999999999999875 221 159999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++||||.+...++.++++++++++++++......+.......+....+........... .++
T Consensus 82 a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 151 (534)
T COG0318 82 AALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLP----------ITL 151 (534)
T ss_pred HHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEeccccccccc----------ccH
Confidence 9999999999999999999999999999999999998844444444433333332222221110000 245
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccc--cCCCcEEEEcCChhhHHHHHH
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ--FYPSDIYMSYLPLAHIYERAN 314 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~~~~~ 314 (698)
+++..............+++++++|+|||||||.||||++||+|++.+.......+. +++.|++++++|++|++|+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~ 231 (534)
T COG0318 152 EALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIV 231 (534)
T ss_pred HHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHH
Confidence 555333222222222367999999999999999999999999999999888877777 899999999999999999998
Q ss_pred HHH-HHHhCcEEEEeC---CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005406 315 QIV-SVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (698)
Q Consensus 315 ~~~-~l~~G~~~~~~~---~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (698)
.+. .++.|+++++.+ +++..++..+.++++|++.++|+++..+++.....-
T Consensus 232 ~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~------------------------- 286 (534)
T COG0318 232 GLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDD------------------------- 286 (534)
T ss_pred HHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCc-------------------------
Confidence 655 589999999987 799999999999999999999999999876321100
Q ss_pred CCCchhhHHHHHHHHHHHcCC-cEEEEEecCCCCCHHHHHHHHHHhC-CceecccCcchhcchhcccCCCC--CCCCCcc
Q 005406 391 QTPSKMWDRLVFNKIRERLGG-RVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCIISAIDKGD--NLSGHVG 466 (698)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~g~-~lr~i~~gG~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG 466 (698)
.... ++|.+++||+++++++++.+++.++ ..++++||+||+++.++.....+ ...+++|
T Consensus 287 -----------------~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G 349 (534)
T COG0318 287 -----------------DDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVG 349 (534)
T ss_pred -----------------cccccceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCccc
Confidence 0002 4999999999999999999999998 47999999999998777766655 4678889
Q ss_pred CCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCC
Q 005406 467 SPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKN 546 (698)
Q Consensus 467 ~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d 546 (698)
.|+|+++++|+|.++....+ ++.|||+++||+++.|||++|+.|.+.|+.+|||+|||+|++|++|+++|+||.||
T Consensus 350 ~~~pg~~v~Ivd~~~~~~~p----g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd 425 (534)
T COG0318 350 RPLPGVEVRIVDPDGGEVLP----GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKD 425 (534)
T ss_pred ccCCCcEEEEEeCCCCccCC----CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccce
Confidence 99999999999965543333 34899999999999999999999999996679999999999999999999999999
Q ss_pred eEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHH
Q 005406 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAV 623 (698)
Q Consensus 547 ~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 623 (698)
+|+. +|++|+|.|||+++.+||.|.+|+|+|.++ ++.++|+|++++... . ...
T Consensus 426 ~I~~-gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~~~~~--------~---------------~~~ 481 (534)
T COG0318 426 LIIS-GGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLKPGGD--------A---------------ELT 481 (534)
T ss_pred EEEe-CCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEcCCCC--------C---------------CCC
Confidence 9995 999999999999999999999999999664 689999999987420 0 012
Q ss_pred HHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 624 LAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 624 ~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.++|.++++ ..++.|++|+.|++++++| +|++||++|++|++.+.+
T Consensus 482 ~~~i~~~~~-~~l~~~~~P~~v~~v~~lP------~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 482 AEELRAFLR-KRLALYKVPRIVVFVDELP------RTASGKIDRRALREEYRA 527 (534)
T ss_pred HHHHHHHHH-hhhhcccCCeEEEEeCCCC------CCCchhhhHHHHHHHHHh
Confidence 566677775 5899999999999999999 999999999999999987
No 16
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-75 Score=663.29 Aligned_cols=563 Identities=22% Similarity=0.314 Sum_probs=445.4
Q ss_pred CcccccCCCCccccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCC
Q 005406 56 WNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGL 135 (698)
Q Consensus 56 ~~~~r~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv 135 (698)
++.+|....+...-.++++.+...|+.++|+++++++||++|+.+. +...+.++.+||+||.++++++|++|.+.|+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~pd~~a~~~~---~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv 102 (624)
T PRK12582 26 ISVERRADGSIVIKSRHPLGPYPRSIPHLLAKWAAEAPDRPWLAQR---EPGHGQWRKVTYGEAKRAVDALAQALLDLGL 102 (624)
T ss_pred eEEEEcCCceEEEecCCCCCCcccCHHHHHHHHHHHCCCchheecc---cCCCCceEEeEHHHHHHHHHHHHHHHHHcCC
Confidence 4455554333323334555667889999999999999999999764 3212346789999999999999999999999
Q ss_pred CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCH-----HHHHHHHhhccceEEEecccc-hHHHHhhhhcCCce
Q 005406 136 QKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGP-----DAVKYVVNHAEIEAIFCIPQT-LNTLLSFISEIPSV 209 (698)
Q Consensus 136 ~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~-----~~l~~il~~~~~~~v~~~~~~-~~~~~~~~~~~~~~ 209 (698)
++||+|+++++|+++|+++++||+++|++++|+++.++. +++.+++++++++++|++... .......... ...
T Consensus 103 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~ 181 (624)
T PRK12582 103 DPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL-LDV 181 (624)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh-cCc
Confidence 999999999999999999999999999999999999885 899999999999999998642 2222222211 122
Q ss_pred eEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCC--CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHh
Q 005406 210 HLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSP--QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAG 287 (698)
Q Consensus 210 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~ 287 (698)
+ ++.++.... ......+.++........ .......++++++|+|||||||.||||++||+++++.+..
T Consensus 182 ~-~i~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~ 251 (624)
T PRK12582 182 T-VVHVTGPGE---------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAM 251 (624)
T ss_pred e-EEEEcCCCc---------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHH
Confidence 3 333332110 111245666554322110 0112346799999999999999999999999999887765
Q ss_pred cccccccCC---CcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeCC--C---hhhHHHHHhhhcCcEEeechHHHHHHH
Q 005406 288 FSLMVQFYP---SDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQG--D---NLKLMDDLAVLKPTIFPSVPRLYNRIY 358 (698)
Q Consensus 288 ~~~~~~~~~---~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~~--~---~~~l~~~i~~~~~t~~~~~P~~~~~l~ 358 (698)
......... .+++++++|++|.+++.. .+.+++.|+++++.+. + ...+++.++++++|+++++|+++..|.
T Consensus 252 ~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~ 331 (624)
T PRK12582 252 QEQLRPREPDPPPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLA 331 (624)
T ss_pred HHHhccccCCCCCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHH
Confidence 544444433 589999999999999876 4567899999988652 2 345677889999999999999999887
Q ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh---
Q 005406 359 AGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--- 435 (698)
Q Consensus 359 ~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~--- 435 (698)
+.+... + ..+....+++|.+++||+++++++.+++.+.+
T Consensus 332 ~~~~~~----~----------------------------------~~~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~ 373 (624)
T PRK12582 332 EAMEKD----D----------------------------------ALRRSFFKNLRLMAYGGATLSDDLYERMQALAVRT 373 (624)
T ss_pred HHHhhC----H----------------------------------HHHHHHhhheeEEEecCCCCCHHHHHHHHHHHHhh
Confidence 642210 0 00111125899999999999999999998753
Q ss_pred ---CCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChh
Q 005406 436 ---GCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEV 512 (698)
Q Consensus 436 ---g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~ 512 (698)
+++++++||+||++.+++.........+++|+|+||+++++++ .+ +.|||+|+|++++.|||++|+
T Consensus 374 ~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~--------~G---~~GEl~vrg~~v~~GY~~~p~ 442 (624)
T PRK12582 374 TGHRIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAP--------VG---DKYEVRVKGPNVTPGYHKDPE 442 (624)
T ss_pred cCCCceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEcc--------CC---CceEEEEECCcccccccCCcc
Confidence 3689999999999876654333445678999999999999975 22 379999999999999999999
Q ss_pred hhcccccCCCceecCcEEEE-e---cCCcEEEEccCCCeEecCCceeecchHHH--HHHhcCcCceeEEEEEcCCCCeEE
Q 005406 513 QTREVIDGDGWLHTGDIGLW-L---PGGRLKIIDRKKNIFKLAQGEYVAPEKIE--NVYAKCKFVLQCFIYGDSFNSCLV 586 (698)
Q Consensus 513 ~t~~~f~~~gw~~TGDlg~~-~---~~G~l~i~GR~~d~ikls~G~~v~p~eIE--~~l~~~p~V~~~~V~g~~~~~~~v 586 (698)
.|++.|+.+|||+|||+|++ | ++|+|+|+||+||+||+++|++|+|.+|| .++.+||.|.+|+|+|.+ ...+.
T Consensus 443 ~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~-~~~~g 521 (624)
T PRK12582 443 LTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQD-RAFIG 521 (624)
T ss_pred chhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEcCC-CCcEE
Confidence 99999988999999999998 4 56999999999999998899999998885 688999999999999986 77889
Q ss_pred EEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcc-eeeEEEEecCCCCCCCCccCcccCC
Q 005406 587 AIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFE-YAKAVTLMPEPFSVENGLLTPTFKI 665 (698)
Q Consensus 587 a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~-~p~~i~~~~~~p~~~~~~~T~~GKi 665 (698)
++|+|+......|....+. ...+.++++++.+.+.+.|.++. ..++.+. +|+++++++++|+.++|.+|++||+
T Consensus 522 ~lv~p~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~ 596 (624)
T PRK12582 522 LLAWPNPAACRQLAGDPDA---APEDVVKHPAVLAILREGLSAHN--AEAGGSSSRIARALLMTEPPSIDAGEITDKGYI 596 (624)
T ss_pred EEEecCHHHHHHHHhcCCC---CHHHHhcCHHHHHHHHHHHHHHH--hhcCCChhheEEEEEeCCCCCccCCcCCccccc
Confidence 9999999887766655332 23456778899999999988885 4789998 9999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhcccC
Q 005406 666 KRPQAKERFAKAISNMYAELAT 687 (698)
Q Consensus 666 ~R~~l~~~~~~~i~~ly~~~~~ 687 (698)
+|+++.+.|+++|++||++...
T Consensus 597 ~R~~~~~~y~~~i~~ly~~~~~ 618 (624)
T PRK12582 597 NQRAVLERRAALVERLYAEPPG 618 (624)
T ss_pred cHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999997543
No 17
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.5e-73 Score=609.86 Aligned_cols=494 Identities=23% Similarity=0.306 Sum_probs=404.3
Q ss_pred HHHHHHHHh-CCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHHHHh
Q 005406 83 DNFIYAVEN-YPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHACSA 160 (698)
Q Consensus 83 ~~l~~~a~~-~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~e~~~~~lA~~~ 160 (698)
..++++... .+|+.|+++. +. .+..+.+||+||.+.++++|+.|++ .|+ +||||+|++|+.+|.++++|||++
T Consensus 13 n~~dr~~~~~~~~~~aii~~---~e-~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~r 87 (528)
T COG0365 13 NALDRHLEADRPDDTAIIFD---GE-DGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATAR 87 (528)
T ss_pred hhhhhhhhccCCCceEEEEE---cC-CCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHH
Confidence 356666653 4789999885 32 2223889999999999999999986 678 999999999999999999999999
Q ss_pred cCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhh--hhcCC-ceeEEEEeCCCCCCCCCCCCCCCceEeeHH
Q 005406 161 YSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSF--ISEIP-SVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (698)
Q Consensus 161 ~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~--~~~~~-~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (698)
+|++.+|+.+.++++++++.+++++++++|+++......... ..... .+..+++.... + +.|.
T Consensus 88 iGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~-----------~---~~~~ 153 (528)
T COG0365 88 IGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRL-----------G---LWYD 153 (528)
T ss_pred cCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccc-----------c---ccHH
Confidence 999999999999999999999999999999987654432211 10000 00003332221 1 5677
Q ss_pred HHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhc-ccccccCCCcEEEEcCChhhHHHHHH-H
Q 005406 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGF-SLMVQFYPSDIYMSYLPLAHIYERAN-Q 315 (698)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~-~~~~~~~~~d~~l~~~pl~h~~~~~~-~ 315 (698)
++...... ..+..+.+++|+++|+|||||||+||||+++|++++...... ...+.+.++|++++..++.|++|... .
T Consensus 154 ~~~~~~~~-~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v 232 (528)
T COG0365 154 EAVEKASE-KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSV 232 (528)
T ss_pred HHhhccCC-CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHH
Confidence 77654432 233444789999999999999999999999999776655433 34577789999999999999999998 7
Q ss_pred HHHHHhCcEEEEeCC----ChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCC
Q 005406 316 IVSVYYGVAVGFYQG----DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQ 391 (698)
Q Consensus 316 ~~~l~~G~~~~~~~~----~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~ 391 (698)
+.+|..|++++++.+ ++..+++.|+++++|.+++.|+.++.|.+...
T Consensus 233 ~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~----------------------------- 283 (528)
T COG0365 233 FSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGL----------------------------- 283 (528)
T ss_pred HHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC-----------------------------
Confidence 889999999999873 27889999999999999999999999986311
Q ss_pred CCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCC
Q 005406 392 TPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPA 471 (698)
Q Consensus 392 ~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~ 471 (698)
.++...++||.+.+.||||++++++++.+.+|++|.+.||+||++++.....+ ...+++.|.|+||
T Consensus 284 -------------~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~-~~~~g~~g~p~pG 349 (528)
T COG0365 284 -------------GEPYDLSSLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP-PVKNGSSGLPLPG 349 (528)
T ss_pred -------------cccccchhheeeeccCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC-CcCCCCCCCCCCC
Confidence 01112268999999999999999999999999999999999999955554444 5556666999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCccEEEEeCC--CccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEe
Q 005406 472 CEIKLVDVPEMNYTSEDQPHPRGEICVRGP--IVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (698)
Q Consensus 472 ~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~--~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ik 549 (698)
+++.++|.+ ++.++.+ . |+|+++.+ ++++|||+||+.+.+.|-+. ||+|||.+++|+||+++|+||.||+||
T Consensus 350 ~~~~vvdd~-g~~~~~~---~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI~ 423 (528)
T COG0365 350 YAVRRVDDE-GNPVPPG---V-GELVVRLPWPGMALTYWNDPERYKEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVIK 423 (528)
T ss_pred ceeEEECCC-CCcCCCC---c-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc-eeecCceeEEccCCCEEEEeeccceEe
Confidence 999999944 5544433 4 99999986 99999999999999988433 999999999999999999999999999
Q ss_pred cCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHH
Q 005406 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAE 626 (698)
Q Consensus 550 ls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 626 (698)
+ .|++|.|.|||++|.+||.|.||+|+|.++ ++.++|||++.++. . .. .+.++
T Consensus 424 v-sG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~afVvL~~g~----------~----------~~---~L~~e 479 (528)
T COG0365 424 V-SGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLAFVVLAAGV----------E----------PN---ELAEE 479 (528)
T ss_pred c-cCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEEEEEecCCC----------C----------hH---HHHHH
Confidence 7 699999999999999999999999999765 46799999999853 1 11 56778
Q ss_pred HHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 627 MNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 627 l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
|++++++ .+.++..|+.|.+++++| +|.||||.|+.|++.+.+
T Consensus 480 i~~~vr~-~~~~~~~p~~i~fv~~LP------kT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 480 IRRHVAR-NIGPHAIPRKIRFVDELP------KTASGKIQRRLLRKILHK 522 (528)
T ss_pred HHHHHHh-ccCcccCCceEEEecCCC------CCCcccHHHHHHHHHHhh
Confidence 8888764 444599999999999999 999999999999998874
No 18
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-72 Score=642.19 Aligned_cols=529 Identities=17% Similarity=0.184 Sum_probs=411.1
Q ss_pred CCCCCCHHHHHHHHHHh--CCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHH
Q 005406 75 HPEIGTLHDNFIYAVEN--YPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWL 152 (698)
Q Consensus 75 ~~~~~tl~~~l~~~a~~--~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~ 152 (698)
....++..++|+++++. +||++|+++. ....+..+.+||+||+++++++|++|+++|+++||+|+|+++|++||+
T Consensus 55 ~~~~n~~~~~l~~~~~~~~~~~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~ 131 (647)
T PTZ00237 55 GGELNTCYNVLDIHVKNPLKRDQDALIYE---CPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL 131 (647)
T ss_pred CCeeeHHHHHHHHhhcccCCCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH
Confidence 34566778889888765 7999999874 221123478999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEeccc---------chHHHHhhhhcCC-ceeEEEEeCCCCC--
Q 005406 153 IVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ---------TLNTLLSFISEIP-SVHLIVVVGGKDE-- 220 (698)
Q Consensus 153 ~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~---------~~~~~~~~~~~~~-~~~~ii~~~~~~~-- 220 (698)
+++|||+++|++++|+++.++.+++.++|++++++++|+++. ....+.++..... ....++.+.....
T Consensus 132 ~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 211 (647)
T PTZ00237 132 IAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITS 211 (647)
T ss_pred HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccc
Confidence 999999999999999999999999999999999999999752 2222333322111 1234444321110
Q ss_pred -C-CC---CCCCCCCceEeeHHHHHhcCC----CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHH-HHHHHHhccc
Q 005406 221 -H-LP---SLPSTSGVKLISYLQLQSQGC----SSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGN-LISNVAGFSL 290 (698)
Q Consensus 221 -~-~~---~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~-l~~~~~~~~~ 290 (698)
. .. ...... ....|++++.... ..........++++++|+|||||||.||||+++|++ +.+.......
T Consensus 212 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~ 289 (647)
T PTZ00237 212 ESDLKKIETIPTIP--NTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRS 289 (647)
T ss_pred ccccccccccCCCc--ccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHH
Confidence 0 00 000001 1245777664321 111122345789999999999999999999999998 5443333334
Q ss_pred ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCCC-------hhhHHHHHhhhcCcEEeechHHHHHHHHHHHH
Q 005406 291 MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGD-------NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITN 363 (698)
Q Consensus 291 ~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~-------~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 363 (698)
.+....+|+++++.|++|+++....+.+++.|+++++++++ +..+++.|+++++|++.++|+++..|.+....
T Consensus 290 ~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 369 (647)
T PTZ00237 290 IIEKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPE 369 (647)
T ss_pred hcCCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcc
Confidence 45677889999999999998776788899999999998753 57899999999999999999999988763110
Q ss_pred HHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceeccc
Q 005406 364 AVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGY 443 (698)
Q Consensus 364 ~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~Y 443 (698)
... . ......++||.+++||+++++++.+++++.+|+++++.|
T Consensus 370 ~~~-----------------------------~--------~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~y 412 (647)
T PTZ00237 370 ATI-----------------------------I--------RSKYDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGY 412 (647)
T ss_pred ccc-----------------------------c--------ccccCcchheEEEecCccCCHHHHHHHHHhcCCCEEeee
Confidence 000 0 000011589999999999999999999998999999999
Q ss_pred CcchhcchhcccCCC-CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCC---CccccccCChhhhccccc
Q 005406 444 GMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP---IVFQGYYKNEVQTREVID 519 (698)
Q Consensus 444 G~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~---~~~~GY~~~~~~t~~~f~ 519 (698)
|+||++++++..... ....+++|+|+|+++++|+| +++..++.++ .|||+++|| +++.|||++++.+++.|+
T Consensus 413 G~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d-~~g~~~~~ge---~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~ 488 (647)
T PTZ00237 413 GQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILS-EDGKELNVNE---IGEVAFKLPMPPSFATTFYKNDEKFKQLFS 488 (647)
T ss_pred chHHhChhhhccCCCCCCCCCCCccCcCCceEEEEC-CCCCCCCCCC---ceEEEEeccCCchhhCceeCCHHHHHHHHh
Confidence 999998665443322 23348999999999999999 4666665554 899999986 789999999999998885
Q ss_pred C-CCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhH
Q 005406 520 G-DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDV 595 (698)
Q Consensus 520 ~-~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~ 595 (698)
. +|||+|||+|++|+||+++|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|+|.++ ++.++|+|+++++.
T Consensus 489 ~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~-~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~ 567 (647)
T PTZ00237 489 KFPGYYNSGDLGFKDENGYYTIVSRSDDQIKI-SGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQ 567 (647)
T ss_pred CCCCEEECCcEEEECCCCeEEEEeccCCEEEE-CCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCc
Confidence 4 799999999999999999999999999997 799999999999999999999999999764 57899999987531
Q ss_pred HHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 596 LKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
. +.. . + .+.+.++|+++++ .+|+.|++|+.|++++++| +|++||++|+.|++.+.
T Consensus 568 ~-------~~~-------~-~---~~~l~~~i~~~~~-~~l~~~~~P~~i~~v~~lP------~T~sGKi~R~~Lr~~~~ 622 (647)
T PTZ00237 568 S-------NQS-------I-D---LNKLKNEINNIIT-QDIESLAVLRKIIIVNQLP------KTKTGKIPRQIISKFLN 622 (647)
T ss_pred c-------ccC-------C-C---HHHHHHHHHHHHH-hhcCccccCcEEEEcCCCC------CCCCccEeHHHHHHHHc
Confidence 0 000 0 0 1244667777776 6899999999999999999 99999999999998864
No 19
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=3.9e-72 Score=632.37 Aligned_cols=524 Identities=22% Similarity=0.270 Sum_probs=412.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
..-|+.++|++.++++|+++|+... + +.+||+||+++++++|++|.++|+++||+|+|+++|+++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~l 75 (563)
T PLN02860 5 SQAHICQCLTRLATLRGNAVVTISG---N------RRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLL 75 (563)
T ss_pred hhhHHHHHHHHHHHhcCCceEEecC---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3468999999999999999998542 1 459999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhh-hcCCceeEEEEeCCCCCCCCCCCCCCCceEee
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI-SEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (698)
||+++|++++||++.++.+++.++++++++++++++........... ..++.++.++..++...... .....+..
T Consensus 76 a~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~ 151 (563)
T PLN02860 76 AVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVF----IFLNSFLT 151 (563)
T ss_pred HHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccc----cchhhccc
Confidence 99999999999999999999999999999999999876533222221 23455555555443210000 00001122
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHH
Q 005406 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQ 315 (698)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~ 315 (698)
.+++...............++++++|+|||||||.||||+++|++++.........+++.++|++++++|++|++++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 231 (563)
T PLN02860 152 TEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 231 (563)
T ss_pred cchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHH
Confidence 22222111111111123467999999999999999999999999998877666666788999999999999999999888
Q ss_pred HHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCc
Q 005406 316 IVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPS 394 (698)
Q Consensus 316 ~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~ 394 (698)
+.++..|+++++.+ +++..+++.++++++|++.++|+++..|.+......
T Consensus 232 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~----------------------------- 282 (563)
T PLN02860 232 LAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSM----------------------------- 282 (563)
T ss_pred HHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhh-----------------------------
Confidence 88999999998877 799999999999999999999999998876321100
Q ss_pred hhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCC--------------
Q 005406 395 KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD-------------- 459 (698)
Q Consensus 395 ~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~-------------- 459 (698)
......++|.+++||+++++++.+.|++.+ ++++++.||+||+++.++.....+
T Consensus 283 -----------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (563)
T PLN02860 283 -----------TWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVN 351 (563)
T ss_pred -----------ccccccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhc
Confidence 000115899999999999999999999888 789999999999986554322111
Q ss_pred ---------CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEE
Q 005406 460 ---------NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIG 530 (698)
Q Consensus 460 ---------~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg 530 (698)
....++|+|+++++++|++.+ +++.|||+++|++++.|||++|+.|++.|+.+|||+|||+|
T Consensus 352 ~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~---------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~ 422 (563)
T PLN02860 352 QTKSSSVHQPQGVCVGKPAPHVELKIGLDE---------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIG 422 (563)
T ss_pred ccccccccccCCcccCCccCCcEEEEecCC---------CCceeEEEEecCcccccccCCccccchhccCCCeEEccceE
Confidence 112378999999999999843 23589999999999999999999999999889999999999
Q ss_pred EEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCc
Q 005406 531 LWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKF 607 (698)
Q Consensus 531 ~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~ 607 (698)
++|+||+++|+||+||+||+ +|++|+|.|||+++.+||+|.+|+|++.++ ++.++|+|++.++. .|...
T Consensus 423 ~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~--~~~~~----- 494 (563)
T PLN02860 423 WIDKAGNLWLIGRSNDRIKT-GGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGW--IWSDN----- 494 (563)
T ss_pred EEcCCCCEEEeecccceeEE-CCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCcc--ccccc-----
Confidence 99999999999999999997 899999999999999999999999999654 47899999987642 00000
Q ss_pred ccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEe-cCCCCCCCCccCcccCCChHHHHHHHHHHHHH
Q 005406 608 EDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLM-PEPFSVENGLLTPTFKIKRPQAKERFAKAISN 680 (698)
Q Consensus 608 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~-~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ 680 (698)
........ .....++|++++++.+|+.|++|+.|+++ +++| +|++||++|++|++++.+.++.
T Consensus 495 -~~~~~~~~---~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP------~t~~GKi~r~~L~~~~~~~~~~ 558 (563)
T PLN02860 495 -EKENAKKN---LTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFP------LTTTGKIRRDEVRREVLSHLQS 558 (563)
T ss_pred -cchhhccc---ccccHHHHHHHHhhCcccccccceEEEEEecCCC------CCcccchhHHHHHHHHHHHHhc
Confidence 00000000 01224567777764579999999998765 6799 9999999999999988766544
No 20
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2.4e-71 Score=634.67 Aligned_cols=521 Identities=17% Similarity=0.189 Sum_probs=408.0
Q ss_pred CCCHHHHHHHHHH-hCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 78 IGTLHDNFIYAVE-NYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 78 ~~tl~~~l~~~a~-~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
.+..+++|+++++ .+|+++|+++. ....+..+.+||+||.+++.++|++|++.|+++||+|+|+++|++|+++++|
T Consensus 87 ~N~~~~~l~~~~~~~~~~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~l 163 (666)
T PLN02654 87 TNICYNCLDRNVEAGNGDKIAIYWE---GNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAML 163 (666)
T ss_pred eeHHHHHHHHhhccCCCCCEEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3445788888876 48999999874 2222345789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchH---------HHHhhhhcC----CceeEEEEeCCCCCCCC
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLN---------TLLSFISEI----PSVHLIVVVGGKDEHLP 223 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~---------~~~~~~~~~----~~~~~ii~~~~~~~~~~ 223 (698)
||+++|++++|+++.++.+++.+++++++++++|++..... .+....... .....++..+.......
T Consensus 164 A~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
T PLN02654 164 ACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKR 243 (666)
T ss_pred HHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccc
Confidence 99999999999999999999999999999999999875321 111111111 11122222222110000
Q ss_pred CCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHH-HHhcccccccCCCcEEEE
Q 005406 224 SLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISN-VAGFSLMVQFYPSDIYMS 302 (698)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l~ 302 (698)
............|+++..... ...+.....++|+++|+|||||||.||||+++|++++.. .......++++++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~ 322 (666)
T PLN02654 244 EDTKWQEGRDVWWQDVVPNYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWC 322 (666)
T ss_pred cccccccCCcccHHHHhhcCC-CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 000000001234556543221 112223357899999999999999999999999997643 344455678899999999
Q ss_pred cCChhhHHHHHH-HHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHH
Q 005406 303 YLPLAHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLF 376 (698)
Q Consensus 303 ~~pl~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~ 376 (698)
++|++|+++... .+.+|+.|+++++++ .++..+++.|+++++|+++++|+++..|.+......
T Consensus 323 ~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~----------- 391 (666)
T PLN02654 323 TADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYV----------- 391 (666)
T ss_pred cCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCcccc-----------
Confidence 999999999766 678899999999986 378899999999999999999999998876311000
Q ss_pred HHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC---CceecccCcchhcchhc
Q 005406 377 TAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG---CQVMEGYGMTETSCIIS 453 (698)
Q Consensus 377 ~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g---~~l~~~YG~TE~~~~~~ 453 (698)
.-++ .++||.+++||+++++++.+++.+.+| +++.+.||+||+++...
T Consensus 392 ------------------~~~~-----------l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~ 442 (666)
T PLN02654 392 ------------------TRHS-----------RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMI 442 (666)
T ss_pred ------------------ccCC-----------hhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeee
Confidence 0000 148999999999999999999998887 78999999999987655
Q ss_pred ccCCC--CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeC--CCccccccCChhhhccccc--CCCceecC
Q 005406 454 AIDKG--DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRG--PIVFQGYYKNEVQTREVID--GDGWLHTG 527 (698)
Q Consensus 454 ~~~~~--~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g--~~~~~GY~~~~~~t~~~f~--~~gw~~TG 527 (698)
...+. ...++++|.|++|++++|+| ++++.++.+ ..|||++++ |+++.|||+|++.+.+.+. .+|||+||
T Consensus 443 ~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~~---~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TG 518 (666)
T PLN02654 443 TPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEIEGE---CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSG 518 (666)
T ss_pred ccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCCCCC---CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeC
Confidence 44332 24678999999999999999 455555433 379999999 7899999999999887652 37999999
Q ss_pred cEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcC
Q 005406 528 DIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQG 604 (698)
Q Consensus 528 Dlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~ 604 (698)
|+|++|+||+++|+||+||+||+ +|++|+|.|||+++.+||.|.+++|+|.++ ++.++|+|++.++.
T Consensus 519 D~~~~d~dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~--------- 588 (666)
T PLN02654 519 DGCSRDKDGYYWLTGRVDDVINV-SGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGV--------- 588 (666)
T ss_pred ceEEECCCCcEEEeeeccCeEEe-CCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCC---------
Confidence 99999999999999999999997 799999999999999999999999999654 46899999988632
Q ss_pred CCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 605 IKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
. .. +.+.++|+++++ .+|+.|++|+.|++++++| +|++||++|+.|++.+..
T Consensus 589 -~--------~~----~~l~~~l~~~~~-~~L~~~~~P~~i~~v~~lP------~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 589 -P--------YS----EELRKSLILTVR-NQIGAFAAPDKIHWAPGLP------KTRSGKIMRRILRKIASR 640 (666)
T ss_pred -C--------CC----HHHHHHHHHHHH-HhCCCCcCCCEEEECCCCC------CCCCcCchHHHHHHHHcC
Confidence 0 01 234556777775 7899999999999999999 999999999999988653
No 21
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=8.9e-71 Score=629.11 Aligned_cols=517 Identities=20% Similarity=0.240 Sum_probs=417.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
.....+++|+++++.+|+++|+++. +...++.+.+||+||++++.++|++|+++|+++||+|+++++|++++++++|
T Consensus 55 ~~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 131 (625)
T TIGR02188 55 ELNVSYNCVDRHLEARPDKVAIIWE---GDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAML 131 (625)
T ss_pred EEEHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3456788888889899999999875 3223446789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc---------hHHHHhhhhcCC-ceeEEEEeCCCCCCCCCCC
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEIP-SVHLIVVVGGKDEHLPSLP 226 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~---------~~~~~~~~~~~~-~~~~ii~~~~~~~~~~~~~ 226 (698)
||+++|++++|+++.++.+++.+++++++++++|+++.. ...+.+....++ .++.+++++....... ..
T Consensus 132 A~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 210 (625)
T TIGR02188 132 ACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVP-WV 210 (625)
T ss_pred HHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcC-cc
Confidence 999999999999999999999999999999999998653 233344444455 5666666654321110 00
Q ss_pred CCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHH-hcccccccCCCcEEEEcCC
Q 005406 227 STSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVA-GFSLMVQFYPSDIYMSYLP 305 (698)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~~~p 305 (698)
. .....++++...... ........++++++|+|||||||.||||+++|++++.... .....+++.++|++++++|
T Consensus 211 --~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 286 (625)
T TIGR02188 211 --E-GRDVWWHDLMAKASA-YCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTAD 286 (625)
T ss_pred --c-cccccHHHHHhhcCC-CCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCC
Confidence 0 112456666554321 2233346789999999999999999999999999865543 3344568889999999999
Q ss_pred hhhHHHHHH-HHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHH
Q 005406 306 LAHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAA 379 (698)
Q Consensus 306 l~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 379 (698)
++|+++... .+.+++.|+++++++ .++..+++.++++++|++.++|+++..|.+......
T Consensus 287 ~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-------------- 352 (625)
T TIGR02188 287 VGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWV-------------- 352 (625)
T ss_pred chhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCccc--------------
Confidence 999988765 678899999999986 378999999999999999999999988876311000
Q ss_pred HHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC---CceecccCcchhcchhcccC
Q 005406 380 YNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG---CQVMEGYGMTETSCIISAID 456 (698)
Q Consensus 380 ~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g---~~l~~~YG~TE~~~~~~~~~ 456 (698)
+....++||.+++||+++++++.+++.+.++ +++++.||+||+++.++...
T Consensus 353 --------------------------~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~ 406 (625)
T TIGR02188 353 --------------------------KKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPL 406 (625)
T ss_pred --------------------------ccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecC
Confidence 0011158999999999999999999998875 78999999999987655433
Q ss_pred CC--CCCCCCccCCCCCcEEEEEecCCCCCCC-CCCCCCccEEEEeC--CCccccccCChhhhccccc--CCCceecCcE
Q 005406 457 KG--DNLSGHVGSPNPACEIKLVDVPEMNYTS-EDQPHPRGEICVRG--PIVFQGYYKNEVQTREVID--GDGWLHTGDI 529 (698)
Q Consensus 457 ~~--~~~~~~vG~p~~~~~v~i~d~~~~~~~~-~~~~~~~GEl~v~g--~~~~~GY~~~~~~t~~~f~--~~gw~~TGDl 529 (698)
+. ...++++|+|++|++++|+| ++++.++ .+ +.|||+++| |++++|||++++.+.+.+. .+|||+|||+
T Consensus 407 ~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g---~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl 482 (625)
T TIGR02188 407 PGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPG---EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDG 482 (625)
T ss_pred CCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCC---CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCce
Confidence 32 34578999999999999999 5566554 44 489999999 6899999999998877763 4789999999
Q ss_pred EEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCC
Q 005406 530 GLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIK 606 (698)
Q Consensus 530 g~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~ 606 (698)
|++|+||+++|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|+|.++ ++.++|+|++.++. .
T Consensus 483 ~~~d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~----------~ 551 (625)
T TIGR02188 483 ARRDKDGYIWITGRVDDVINV-SGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGY----------E 551 (625)
T ss_pred EEEcCCCcEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCC----------C
Confidence 999999999999999999997 799999999999999999999999999653 57899999987642 0
Q ss_pred cccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 607 FEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 607 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
.+ +.+.++|+++++ .+|+.+++|+.|++++++| +|++||++|+.|++.+.
T Consensus 552 --------~~----~~~~~~l~~~~~-~~l~~~~~P~~i~~v~~lP------~t~sGKi~r~~l~~~~~ 601 (625)
T TIGR02188 552 --------PD----DELRKELRKHVR-KEIGPIAKPDKIRFVPGLP------KTRSGKIMRRLLRKIAA 601 (625)
T ss_pred --------CC----HHHHHHHHHHHH-hhcCCCccCcEEEECCCCC------CCCCccchHHHHHHHHc
Confidence 01 124566777775 7899999999999999999 99999999999998864
No 22
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.4e-71 Score=620.97 Aligned_cols=494 Identities=22% Similarity=0.275 Sum_probs=410.9
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
.++.++|++.++++||++|+.+. + +.+||+||.++++++|++|.+.|+++|++|+|+++|+++|+++++||
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~---~------~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~ 119 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE---R------GTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAA 119 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999753 2 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHH
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (698)
+++|++++|+++.++.+++.+++++++++++|++.+....+.......+.+..++....... .....+.++++
T Consensus 120 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 192 (549)
T PRK07788 120 GKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDE-------PSGSTDETLDD 192 (549)
T ss_pred HhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccc-------cCCcCcccHHH
Confidence 99999999999999999999999999999999998776665554444444444433222110 01123456777
Q ss_pred HHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHH
Q 005406 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVS 318 (698)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 318 (698)
+....... ..+..+++.++++|||||||.||||+++|+++++.+......+++.++|++++.+|++|.+++...+.+
T Consensus 193 ~~~~~~~~---~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 269 (549)
T PRK07788 193 LIAGSSTA---PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLA 269 (549)
T ss_pred HhcCCCCC---CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHH
Confidence 76543221 122346788999999999999999999999999988877777888899999999999999999888889
Q ss_pred HHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhh
Q 005406 319 VYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (698)
Q Consensus 319 l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (698)
+..|+++++.. +++..+++.++++++|++.++|+++..+.+.......
T Consensus 270 l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~------------------------------- 318 (549)
T PRK07788 270 MALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLA------------------------------- 318 (549)
T ss_pred HHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccC-------------------------------
Confidence 99999998876 7999999999999999999999999988763211000
Q ss_pred HHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCCCccCCCCCcEEEE
Q 005406 398 DRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKL 476 (698)
Q Consensus 398 d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i 476 (698)
....+++|.+++||+++++++.+++.+.+++.+++.||+||++..+...... ...++++|+|+++++++|
T Consensus 319 ---------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i 389 (549)
T PRK07788 319 ---------KYDTSSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKI 389 (549)
T ss_pred ---------CCCCCceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEE
Confidence 0001589999999999999999999998999999999999998655433221 245678999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceee
Q 005406 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYV 556 (698)
Q Consensus 477 ~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v 556 (698)
+| +++..++.+. .|||+++|++++.||+++++. . + .+|||+|||+|++|++|.++|+||.||+||+ +|++|
T Consensus 390 ~d-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~--~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~-~G~~v 460 (549)
T PRK07788 390 LD-ENGNEVPRGV---VGRIFVGNGFPFEGYTDGRDK--Q-I-IDGLLSSGDVGYFDEDGLLFVDGRDDDMIVS-GGENV 460 (549)
T ss_pred EC-CCcCCCCCCC---eEEEEEeCCCccccccCCCcc--c-c-cCCceecCceEEEcCCCCEEEeccCcceEEE-CCEEE
Confidence 99 5556555554 899999999999999998875 2 2 4799999999999999999999999999996 89999
Q ss_pred cchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHh
Q 005406 557 APEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKE 633 (698)
Q Consensus 557 ~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 633 (698)
+|.+||+++.+||+|.+++|++.++ ++.++|+|+++++. ..+ .++|+++++
T Consensus 461 ~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~--------~~~-----------------~~~l~~~~~- 514 (549)
T PRK07788 461 FPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGA--------ALD-----------------EDAIKDYVR- 514 (549)
T ss_pred CHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCC--------CCC-----------------HHHHHHHHH-
Confidence 9999999999999999999998654 46789999987632 111 355666665
Q ss_pred CCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHH
Q 005406 634 GQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKE 672 (698)
Q Consensus 634 ~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~ 672 (698)
.+|+.|++|+.|++++++| +|++||++|++|++
T Consensus 515 ~~l~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~ 547 (549)
T PRK07788 515 DNLARYKVPRDVVFLDELP------RNPTGKVLKRELRE 547 (549)
T ss_pred HhhhcCCCCcEEEEeCCCC------CCCCcCEeHHHhhc
Confidence 6899999999999999999 99999999999975
No 23
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=5.3e-70 Score=621.43 Aligned_cols=523 Identities=22% Similarity=0.291 Sum_probs=418.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|++++|.+.++++|+++|+.+... .+.....+++||+||.+++.++|++|+++|+++|++|+++++|+++|++++|
T Consensus 23 ~~~t~~~~l~~~a~~~p~~~Al~~~~~-~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 23 LPASTYELLSRAAARHPDAPALSFLLD-ADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred CCCCHHHHHHHHHHHCCCCceEEeecc-cCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 356899999999999999999987411 1112345789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc-----hHHHHhhhhcCCceeEEEEeCCCCCCCC--CC----
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT-----LNTLLSFISEIPSVHLIVVVGGKDEHLP--SL---- 225 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~ii~~~~~~~~~~--~~---- 225 (698)
||+++| +++|+++.++++++.+++++++++++|++... ...+.......+.++.++.++....... ..
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 180 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPL 180 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCcccccccccccccc
Confidence 999999 56999999999999999999999999997543 3445455556677777777654321000 00
Q ss_pred -CCCCCceEeeHHHHHhcCCCCC-CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEc
Q 005406 226 -PSTSGVKLISYLQLQSQGCSSP-QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSY 303 (698)
Q Consensus 226 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~ 303 (698)
....+..+..|.+.+....... .......++++++|+|||||||.||||++||+++++........+++.++|++++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~ 260 (632)
T PRK07529 181 IRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCG 260 (632)
T ss_pred cccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 0002223456666655432211 12233467999999999999999999999999999888777767788999999999
Q ss_pred CChhhHHHHHH-HHHHHHhCcEEEEeCC----C---hhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHH
Q 005406 304 LPLAHIYERAN-QIVSVYYGVAVGFYQG----D---NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKL 375 (698)
Q Consensus 304 ~pl~h~~~~~~-~~~~l~~G~~~~~~~~----~---~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l 375 (698)
+|++|.++... .+.+++.|+++++.+. + ...+++.++++++|++.++|+++..+.+....
T Consensus 261 ~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~------------ 328 (632)
T PRK07529 261 LPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD------------ 328 (632)
T ss_pred cCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc------------
Confidence 99999999876 6788999999998752 1 35788999999999999999999888652100
Q ss_pred HHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhccc
Q 005406 376 FTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAI 455 (698)
Q Consensus 376 ~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~ 455 (698)
....+++|.+++||+++++++.+.+++.+|++++++||+||++.+++..
T Consensus 329 -------------------------------~~~~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~ 377 (632)
T PRK07529 329 -------------------------------GHDISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVN 377 (632)
T ss_pred -------------------------------CCCccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccC
Confidence 0001589999999999999999999998999999999999998776655
Q ss_pred CCC-CCCCCCccCCCCCcEEEEEecCC-CCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEe
Q 005406 456 DKG-DNLSGHVGSPNPACEIKLVDVPE-MNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWL 533 (698)
Q Consensus 456 ~~~-~~~~~~vG~p~~~~~v~i~d~~~-~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~ 533 (698)
... ....+++|.|+|+++++|+..++ +.+.....+++.|||+|+||+++.||++++ .+...|..+|||+|||+|++|
T Consensus 378 ~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~-~~~~~~~~~gw~~TGDlg~~d 456 (632)
T PRK07529 378 PPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAA-HNKGLWLEDGWLNTGDLGRID 456 (632)
T ss_pred CccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCc-cccccccCCCceEcCcEEEEc
Confidence 433 24678999999999999975433 322223344458999999999999999875 455666679999999999999
Q ss_pred cCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccH
Q 005406 534 PGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDL 610 (698)
Q Consensus 534 ~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~ 610 (698)
+||+++|.||.||+||+ +|++|+|.+||++|.+||+|.+|+|+|.++ ++.++|+|++.+.. ..+
T Consensus 457 ~dG~l~i~GR~~d~i~~-~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~--------~~~---- 523 (632)
T PRK07529 457 ADGYFWLTGRAKDLIIR-GGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGA--------SAT---- 523 (632)
T ss_pred CCceEEEEecccCEEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCC--------CCC----
Confidence 99999999999999996 899999999999999999999999999654 57899999987632 011
Q ss_pred HHhhCCHHHHHHHHHHHHHHHHhCCCC-CcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHH
Q 005406 611 EQLCNDPRARAAVLAEMNAVGKEGQLR-GFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAI 678 (698)
Q Consensus 611 ~~~~~~~~~~~~i~~~l~~~~~~~~L~-~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i 678 (698)
.++|+++++ .+|+ .+++|+.|++++++| +|++||++|++|++.+....
T Consensus 524 -------------~~~l~~~~~-~~l~~~~~~P~~i~~v~~lP------~t~~GKi~r~~Lr~~~~~~~ 572 (632)
T PRK07529 524 -------------EAELLAFAR-DHIAERAAVPKHVRILDALP------KTAVGKIFKPALRRDAIRRV 572 (632)
T ss_pred -------------HHHHHHHHH-HhcchhccCCcEEEEecCCC------CCCCCcccHHHHHHHHHHHH
Confidence 345566665 4565 579999999999999 99999999999999876533
No 24
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.1e-70 Score=615.98 Aligned_cols=496 Identities=20% Similarity=0.221 Sum_probs=396.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...++.+.|.+.++++|+++|+.+. . .+.+||+||.++++++|++|.+ .+||+|+|+++|+++|+++++
T Consensus 17 ~~~~~~~~~~~~~~~~p~~~a~~~~---~-----~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~l 85 (539)
T PRK06334 17 SGKTVLESFLKLCSEMTTATVCWDE---Q-----LGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYF 85 (539)
T ss_pred cCCcHHHHHHHHHHhCCCceEEEeC---C-----CCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHH
Confidence 3478999999999999999998543 1 1359999999999999999987 389999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCC-ceeEEEEeCCCCCCCCCCCCCCCceEee
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIP-SVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (698)
||+++|++++|+++.++.+++.++++++++++++++.+....+.+...... ....++.+++.... ..
T Consensus 86 A~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~ 153 (539)
T PRK06334 86 ATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKE------------LS 153 (539)
T ss_pred HHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhh------------cc
Confidence 999999999999999999999999999999999998776555444322110 01123333321100 01
Q ss_pred HHHHHhcCC----C-----CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCCh
Q 005406 236 YLQLQSQGC----S-----SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPL 306 (698)
Q Consensus 236 ~~~~~~~~~----~-----~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl 306 (698)
+.+....+. . .........++++++|+|||||||.||||++||+++.+........++++++|++++++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~ 233 (539)
T PRK06334 154 FWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPP 233 (539)
T ss_pred HHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecch
Confidence 111100000 0 0001123568999999999999999999999999999887777667888899999999999
Q ss_pred hhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 005406 307 AHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSK 383 (698)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k 383 (698)
+|.+++.. .+.++..|+++++.. .++..+++.|+++++|++.++|+++..|.+.....
T Consensus 234 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------- 294 (539)
T PRK06334 234 FHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQ------------------- 294 (539)
T ss_pred HhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhc-------------------
Confidence 99999876 677899999998875 68999999999999999999999999887632110
Q ss_pred HHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCC-CC
Q 005406 384 KQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD-NL 461 (698)
Q Consensus 384 ~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~-~~ 461 (698)
....+++|.+++||+++++++.+++.+.+ ++.+++.||+||++.+++...... ..
T Consensus 295 -----------------------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~ 351 (539)
T PRK06334 295 -----------------------ESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKH 351 (539)
T ss_pred -----------------------ccccccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCCCCC
Confidence 00015899999999999999999999888 689999999999987666544332 34
Q ss_pred CCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhccc-ccCCCceecCcEEEEecCCcEEE
Q 005406 462 SGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREV-IDGDGWLHTGDIGLWLPGGRLKI 540 (698)
Q Consensus 462 ~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~-f~~~gw~~TGDlg~~~~~G~l~i 540 (698)
.+++|+|+++++++|+|.+++..++.++ .|||+|+|++++.|||++++.+... ++++|||+|||+|++|++|+++|
T Consensus 352 ~~~vG~p~~g~~v~i~d~~~~~~~~~g~---~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~ 428 (539)
T PRK06334 352 ESCVGMPIRGMDVLIVSEETKVPVSSGE---TGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFL 428 (539)
T ss_pred CCcCceecCCCEEEEEcCCCCccCCCCc---eEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEE
Confidence 5689999999999999965566666655 8999999999999999999876543 24578999999999999999999
Q ss_pred EccCCCeEecCCceeecchHHHHHHhcCcCcee------EEEEEcCCCC-eEEEEEEcChhHHHHHHHHcCCCcccHHHh
Q 005406 541 IDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQ------CFIYGDSFNS-CLVAIVAVDPDVLKDWAASQGIKFEDLEQL 613 (698)
Q Consensus 541 ~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~------~~V~g~~~~~-~~va~vv~~~~~~~~~~~~~~~~~~~~~~~ 613 (698)
+||.||+||+ +|++|+|.|||++|.+||+|.+ ++|++.+++. .++++++....
T Consensus 429 ~GR~~d~ik~-~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------------- 488 (539)
T PRK06334 429 KGRLSRFVKI-GAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEKVRLCLFTTFPTS------------------- 488 (539)
T ss_pred EeccCCeEEE-CCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCceEEEEEEeccCC-------------------
Confidence 9999999997 8999999999999999999998 7888876543 34455543211
Q ss_pred hCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 614 CNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 614 ~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.+++++++++..++.|++|+.|++++++| +|++|||+|++|++....
T Consensus 489 ----------~~~~~~~l~~~~~~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~~~~~ 535 (539)
T PRK06334 489 ----------ISEVNDILKNSKTSSILKISYHHQVESIP------MLGTGKPDYCSLNALAKS 535 (539)
T ss_pred ----------hHHHHHHHHhcCCcccccchheeeecccc------cccCCcccHHHHHHHHHH
Confidence 23455666544578999999999999999 999999999999887544
No 25
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=2.4e-70 Score=624.68 Aligned_cols=524 Identities=16% Similarity=0.156 Sum_probs=412.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
.....+++|+++++.+|+++|+++. +...+..+.+||+||++++.++|++|+++|+++||+|+|+++|++++++++|
T Consensus 50 ~~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~l 126 (628)
T TIGR02316 50 RTNLCHNALDRHLDERGEQLALVTV---SSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAML 126 (628)
T ss_pred EeeHHHHHHHHHhCcCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3455678898888899999999874 3222345789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc---------hHHHHhhhhcC-CceeEEEEeCCCCCCCCCCC
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEI-PSVHLIVVVGGKDEHLPSLP 226 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~---------~~~~~~~~~~~-~~~~~ii~~~~~~~~~~~~~ 226 (698)
||+++|++++|+++.++.+++.+++++++++++|+++.. ...+.++.... +....+++++........
T Consensus 127 A~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-- 204 (628)
T TIGR02316 127 ACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMRL-- 204 (628)
T ss_pred HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcCc--
Confidence 999999999999999999999999999999999997642 12222222222 234455665532111000
Q ss_pred CCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHH-HHhcccccccCCCcEEEEcCC
Q 005406 227 STSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISN-VAGFSLMVQFYPSDIYMSYLP 305 (698)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l~~~p 305 (698)
.......|.++.........+.....++++++|+|||||||.||||+++|++++.. .......+++.++|++++++|
T Consensus 205 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 282 (628)
T TIGR02316 205 --IPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASD 282 (628)
T ss_pred --ccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCC
Confidence 00012456666544322122223356899999999999999999999999997644 334445578899999999999
Q ss_pred hhhHHHHHH-HHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHH
Q 005406 306 LAHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAA 379 (698)
Q Consensus 306 l~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 379 (698)
++|+++... .+.+++.|+++++++ .++..+++.|+++++|+++++|+++..|.+.....
T Consensus 283 ~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~--------------- 347 (628)
T TIGR02316 283 VGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAW--------------- 347 (628)
T ss_pred CCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcc---------------
Confidence 999998755 778899999999986 36788999999999999999999998776521000
Q ss_pred HHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-
Q 005406 380 YNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG- 458 (698)
Q Consensus 380 ~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~- 458 (698)
.+....++||.+++||+++++++.++++..+|..+++.||+||++..++.....
T Consensus 348 -------------------------~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~ 402 (628)
T TIGR02316 348 -------------------------LRKHDLSSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGL 402 (628)
T ss_pred -------------------------cccCCccceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCC
Confidence 000111589999999999999999999998999999999999998544332221
Q ss_pred ---CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCC---CccccccCChhhhcccc---cCCCceecCcE
Q 005406 459 ---DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP---IVFQGYYKNEVQTREVI---DGDGWLHTGDI 529 (698)
Q Consensus 459 ---~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~---~~~~GY~~~~~~t~~~f---~~~gw~~TGDl 529 (698)
....+++|.|++|++++|+|.++++.++.++ .|||+++|| +++.|||++++.+.+.+ ..++||+|||+
T Consensus 403 ~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~---~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~ 479 (628)
T TIGR02316 403 DLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNE---KGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDW 479 (628)
T ss_pred CcCCCCCCCcccCcCCceEEEEECCCCCCCCCCC---cEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCce
Confidence 2346889999999999999965677666554 899999998 57899999998877654 25789999999
Q ss_pred EEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCC
Q 005406 530 GLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIK 606 (698)
Q Consensus 530 g~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~ 606 (698)
|++|+||+++|+||.||+||+ +|++|+|.|||++|.+||+|.+|+|+|.++ ++.++++|++.+... ..
T Consensus 480 g~~d~dG~l~i~GR~dd~ik~-~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~--------~~ 550 (628)
T TIGR02316 480 GIRDEDGYTFILGRTDDVINV-AGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDS--------AG 550 (628)
T ss_pred EEEcCCCcEEEEEcCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcc--------cc
Confidence 999999999999999999997 899999999999999999999999999654 568899998875310 00
Q ss_pred cccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 607 FEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 607 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
+..-...+.++|+++++ .+|+.|++|+.|++++++| +|++||++|+.|++.+.
T Consensus 551 ---------~~~~~~~~~~~i~~~~~-~~L~~~~~P~~v~~v~~lP------~t~sGKi~r~~L~~~~~ 603 (628)
T TIGR02316 551 ---------DAHDPHAVETGMMDCVV-RQLGAVARPARVYFVAALP------KTRSGKLLRRSIQALAE 603 (628)
T ss_pred ---------cccchHHHHHHHHHHHH-HhcCCCcCCCEEEEcCCCC------CCCchHHHHHHHHHHHc
Confidence 00001234567777775 7899999999999999999 99999999999998764
No 26
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.8e-70 Score=623.43 Aligned_cols=515 Identities=17% Similarity=0.233 Sum_probs=414.0
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
...+++|+++++++|+++|+++. +...+..+.+||+||++++.++|++|++.|+++||+|+|+++|++++++++|||
T Consensus 67 n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~ 143 (637)
T PRK00174 67 NVSYNCLDRHLKTRGDKVAIIWE---GDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLAC 143 (637)
T ss_pred EHHHHHHHHhhccCCCCeEEEEE---CCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 33567888889999999999874 221224578999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccch---------HHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCC
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL---------NTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTS 229 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~---------~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 229 (698)
+++|++++|+++.++.+++.+++++++++++|+++... ..+.+....++.++.+++++....... . .
T Consensus 144 ~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~ 219 (637)
T PRK00174 144 ARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD-W---V 219 (637)
T ss_pred HHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC-c---C
Confidence 99999999999999999999999999999999976532 233334444566666766654321110 0 0
Q ss_pred CceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHH-hcccccccCCCcEEEEcCChhh
Q 005406 230 GVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVA-GFSLMVQFYPSDIYMSYLPLAH 308 (698)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~~~pl~h 308 (698)
......++++..... ...+.....++++++|+|||||||.||||+++|++++.... .....+++.++|++++.+|++|
T Consensus 220 ~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 298 (637)
T PRK00174 220 EGRDLWWHELVAGAS-DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGW 298 (637)
T ss_pred CCCcccHHHHHhhcC-CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchH
Confidence 011245666654322 12223345789999999999999999999999999875543 3334467888999999999999
Q ss_pred HHHHHH-HHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 005406 309 IYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNS 382 (698)
Q Consensus 309 ~~~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 382 (698)
+.+... .+.+++.|+++++++ .++..+++.|+++++|++.++|+++..|.+......
T Consensus 299 ~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~----------------- 361 (637)
T PRK00174 299 VTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHP----------------- 361 (637)
T ss_pred hhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCccc-----------------
Confidence 998765 678899999999976 378899999999999999999999988876311000
Q ss_pred HHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC---CceecccCcchhcchhcccCCC-
Q 005406 383 KKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG---CQVMEGYGMTETSCIISAIDKG- 458 (698)
Q Consensus 383 k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g---~~l~~~YG~TE~~~~~~~~~~~- 458 (698)
.....++||.+++||+++++++.+++.+.++ +++++.||+||+++.++...+.
T Consensus 362 -----------------------~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~ 418 (637)
T PRK00174 362 -----------------------KKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA 418 (637)
T ss_pred -----------------------ccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC
Confidence 0001158999999999999999999988876 7899999999998765543332
Q ss_pred -CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeC--CCccccccCChhhhcccc--cCCCceecCcEEEEe
Q 005406 459 -DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRG--PIVFQGYYKNEVQTREVI--DGDGWLHTGDIGLWL 533 (698)
Q Consensus 459 -~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g--~~~~~GY~~~~~~t~~~f--~~~gw~~TGDlg~~~ 533 (698)
....+++|+|++|++++|+| +++..++.+. .|||+++| |++++|||++++.+.+.+ ..+|||+|||+|++|
T Consensus 419 ~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~---~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d 494 (637)
T PRK00174 419 TPLKPGSATRPLPGIQPAVVD-EEGNPLEGGE---GGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRD 494 (637)
T ss_pred CCcCCCcccCCCCCceEEEEC-CCCCCCCCCC---cEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEc
Confidence 24467899999999999999 5556555554 89999999 689999999999887765 357999999999999
Q ss_pred cCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccH
Q 005406 534 PGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDL 610 (698)
Q Consensus 534 ~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~ 610 (698)
+||+++|+||+||+||+ +|++|+|.|||++|.+||+|.+|+|+|.++ ++.++|+|++.++. .
T Consensus 495 ~dG~l~~~GR~dd~ik~-~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~----------~---- 559 (637)
T PRK00174 495 EDGYYWITGRVDDVLNV-SGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGE----------E---- 559 (637)
T ss_pred CCCcEEEEEecccEEEe-CCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCC----------C----
Confidence 99999999999999997 799999999999999999999999999553 57899999987642 0
Q ss_pred HHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 611 EQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 611 ~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
.+ +.+.++|+++++ ..|+.|++|+.|++++++| +|++||++|++|++.+.
T Consensus 560 ----~~----~~~~~~l~~~l~-~~l~~~~~P~~i~~v~~lP------~t~~GKi~R~~L~~~~~ 609 (637)
T PRK00174 560 ----PS----DELRKELRNWVR-KEIGPIAKPDVIQFAPGLP------KTRSGKIMRRILRKIAE 609 (637)
T ss_pred ----CC----HHHHHHHHHHHH-hhcCCccCCCEEEEcCCCC------CCCCcchHHHHHHHHHc
Confidence 01 233456777775 7899999999999999999 99999999999988754
No 27
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.5e-69 Score=671.30 Aligned_cols=589 Identities=15% Similarity=0.148 Sum_probs=436.9
Q ss_pred chHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHH
Q 005406 3 DSSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLH 82 (698)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~ 82 (698)
+..++++|.++|++++++|+.+++++++...... .. ++...... .++ ....+++
T Consensus 186 i~~l~~~f~~lL~~~~~~p~~~l~~l~~~~~~~~------~~--~~~~~~~~----------------~~~--~~~~~l~ 239 (1389)
T TIGR03443 186 ITIVADQLAQLLSAASSNPDEPIGKVSLITPSQK------SL--LPDPTKDL----------------DWS--GFRGAIH 239 (1389)
T ss_pred HHHHHHHHHHHHHHHHhCcCCceecccCCCHHHH------hh--hhcccccc----------------CcC--cccCcHH
Confidence 3568899999999999999999999988764421 00 00000000 000 1135799
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcC
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYS 162 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G 162 (698)
++|+++++++||++|+++.........+.+.+||+||.++++++|++|++.|+++|++|+|+++|+++|++++|||+++|
T Consensus 240 ~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~l~~G 319 (1389)
T TIGR03443 240 DIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGVLKAG 319 (1389)
T ss_pred HHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHHHhhC
Confidence 99999999999999997641000001235679999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHhhccceEEEecccc---hHHHHhhhhc----CCceeEEEEeCCCCCCCCCCCCCCCceEee
Q 005406 163 YISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---LNTLLSFISE----IPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (698)
Q Consensus 163 ~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~---~~~~~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (698)
++++|++|.++.+++.++++++++++++++... ...+...... ...+..+...+..... ..... ..
T Consensus 320 ~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~ 392 (1389)
T TIGR03443 320 ATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLV-GGSLE------GG 392 (1389)
T ss_pred cEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccccc-ccccc------cc
Confidence 999999999999999999999999999987542 1111111110 0011111111110000 00000 00
Q ss_pred HHHHHhcCC--CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHH
Q 005406 236 YLQLQSQGC--SSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERA 313 (698)
Q Consensus 236 ~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~ 313 (698)
..++..... ..........+++++||+|||||||.||||+++|+++++.+.+....+++.++|++++++|++|+.++.
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~ 472 (1389)
T TIGR03443 393 ETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGIAHDPIQR 472 (1389)
T ss_pred cccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCceecchHH
Confidence 000000000 000111234689999999999999999999999999999988888888899999999999999999998
Q ss_pred HHHHHHHhCcEEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005406 314 NQIVSVYYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (698)
Q Consensus 314 ~~~~~l~~G~~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (698)
.++.+++.|+++++.+ .++..+++.|+++++|+++++|+++..+......
T Consensus 473 ~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~-------------------------- 526 (1389)
T TIGR03443 473 DMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQATT-------------------------- 526 (1389)
T ss_pred HHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcccc--------------------------
Confidence 8999999999999876 3678999999999999999999999877542100
Q ss_pred CCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCC---------
Q 005406 390 GQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD--------- 459 (698)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~--------- 459 (698)
...++|.+++||+++++...+.+.... +++++|+||+||++.+++......
T Consensus 527 -------------------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~ 587 (1389)
T TIGR03443 527 -------------------PIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLK 587 (1389)
T ss_pred -------------------cCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhh
Confidence 014899999999999999998887754 789999999999987665432211
Q ss_pred --CCCCCccCCCCCcEEEEEecCC-CCCCCCCCCCCccEEEEeCCCccccccCChhhhccccc-----------------
Q 005406 460 --NLSGHVGSPNPACEIKLVDVPE-MNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID----------------- 519 (698)
Q Consensus 460 --~~~~~vG~p~~~~~v~i~d~~~-~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~----------------- 519 (698)
....++|+|+++++++|+|.++ ...++.| ..|||||+||++++||+++|+.|+++|.
T Consensus 588 ~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G---~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~ 664 (1389)
T TIGR03443 588 NLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVG---EVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKEN 664 (1389)
T ss_pred cccCcCcCCCccCCCEEEEECCccCCCcCCCC---CceEEEecccccchhcCCChhHhhhhccCCcccCccccccccccc
Confidence 1235799999999999999544 3444444 4899999999999999999999999883
Q ss_pred -----------CCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeE
Q 005406 520 -----------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCL 585 (698)
Q Consensus 520 -----------~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~ 585 (698)
.+|||+|||+|++++||.|+|+||.||+||+ +|+||+|.|||++|.+||.|.+++|++..+ +..+
T Consensus 665 ~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki-~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~l 743 (1389)
T TIGR03443 665 NKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKI-RGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTL 743 (1389)
T ss_pred ccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEe-CcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEE
Confidence 3689999999999999999999999999997 899999999999999999999999877432 4689
Q ss_pred EEEEEcChhH--HHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCccc
Q 005406 586 VAIVAVDPDV--LKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTF 663 (698)
Q Consensus 586 va~vv~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~G 663 (698)
+|+|++.... ...+....... .....++..........++++++++ .+||.|++|..|++++++| +|++|
T Consensus 744 va~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~-~~Lp~y~~P~~~~~~~~lP------~t~~G 815 (1389)
T TIGR03443 744 VSYIVPQDKSDELEEFKSEVDDE-ESSDPVVKGLIKYRKLIKDIREYLK-KKLPSYAIPTVIVPLKKLP------LNPNG 815 (1389)
T ss_pred EEEEeccCccccccccccccccc-cccccchhhhhhhhhhHHHHHHHHH-hhCCcccCCceEEEcccCC------CCCCc
Confidence 9999987321 11000000000 0000011111112234567777775 7899999999999999999 99999
Q ss_pred CCChHHHHHHHHHHHHHH
Q 005406 664 KIKRPQAKERFAKAISNM 681 (698)
Q Consensus 664 Ki~R~~l~~~~~~~i~~l 681 (698)
||+|++|++.+..+++.+
T Consensus 816 Kidr~~L~~~~~~~~~~~ 833 (1389)
T TIGR03443 816 KVDKPALPFPDTAQLAAV 833 (1389)
T ss_pred cccHhhcCCCchhhhhhh
Confidence 999999987666655543
No 28
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.2e-68 Score=602.42 Aligned_cols=503 Identities=22% Similarity=0.304 Sum_probs=413.8
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..|+.++|++.++.+|+++|+.+. +...++++.+||+||+++++++|++|.+.|+++|++|+++++|+++|++++||
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la 99 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAV---RLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLA 99 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEec---CCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 357999999999999999999875 32223457899999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc-----hHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCce
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT-----LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 232 (698)
|+++|++++|+++.++.+++.++++.+++++++++... ...+......++.++.++.++...
T Consensus 100 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 166 (547)
T PRK13295 100 CSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDG------------- 166 (547)
T ss_pred HHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCC-------------
Confidence 99999999999999999999999999999999998753 222333334455666666654321
Q ss_pred EeeHHHHHhcCC-------CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCC
Q 005406 233 LISYLQLQSQGC-------SSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLP 305 (698)
Q Consensus 233 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p 305 (698)
..++.++..... ..........++++++|+|||||||.||||+++|++++..+......+++.++|++++++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p 246 (547)
T PRK13295 167 ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASP 246 (547)
T ss_pred ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecC
Confidence 123334332110 0011122346789999999999999999999999999988887777788899999999999
Q ss_pred hhhHHHHHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 005406 306 LAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSK 383 (698)
Q Consensus 306 l~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k 383 (698)
++|.+++.. .+.+++.|+++++.+ .++..+++.++++++|++.++|.++..+.......
T Consensus 247 ~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~------------------- 307 (547)
T PRK13295 247 MAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKES------------------- 307 (547)
T ss_pred chhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccc-------------------
Confidence 999998766 677899999999887 68999999999999999999999998886531100
Q ss_pred HHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC--CCC
Q 005406 384 KQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG--DNL 461 (698)
Q Consensus 384 ~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~--~~~ 461 (698)
....+++|.+++||+++++++.+++.+.+++++++.||+||++.+++..... ...
T Consensus 308 -----------------------~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~ 364 (547)
T PRK13295 308 -----------------------GRPVSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDPDERA 364 (547)
T ss_pred -----------------------CCCcccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCcchhc
Confidence 0011589999999999999999999988899999999999998765543322 133
Q ss_pred CCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEE
Q 005406 462 SGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKII 541 (698)
Q Consensus 462 ~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~ 541 (698)
.+++|+|+++++++|+| +++...+.++ .|||+|+|++++.||+++|+.|+.. .+|||+|||+|+++++|.+++.
T Consensus 365 ~~~~G~~~~~~~v~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~ 438 (547)
T PRK13295 365 STTDGCPLPGVEVRVVD-ADGAPLPAGQ---IGRLQVRGCSNFGGYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRIS 438 (547)
T ss_pred cCccccccCCcEEEEEC-CCCCCCCCCC---CCeEEEEcCcccccccCCccccccC--CCCCeecceEEEEcCCceEEEE
Confidence 46899999999999999 4556555554 8999999999999999999999876 5789999999999999999999
Q ss_pred ccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHH
Q 005406 542 DRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPR 618 (698)
Q Consensus 542 GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (698)
||.||+||+ +|++|+|.+||++|.++|+|.+++|++.++ ++.++++|++++.. ..
T Consensus 439 gR~~~~i~~-~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~--------~~------------- 496 (547)
T PRK13295 439 GRSKDVIIR-GGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAFVVPRPGQ--------SL------------- 496 (547)
T ss_pred eccCCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCC--------CC-------------
Confidence 999999997 899999999999999999999999998543 46789999987631 00
Q ss_pred HHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 619 ARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 619 ~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
..+++.+++++..|+.|++|+.|++++++| +|++||++|++|++.+.+
T Consensus 497 ----~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP------~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 497 ----DFEEMVEFLKAQKVAKQYIPERLVVRDALP------RTPSGKIQKFRLREMLRG 544 (547)
T ss_pred ----CHHHHHHHHHhccCccccCCcEEEEeccCC------CCCCccccHHHHHHHHhc
Confidence 024555565545899999999999999999 999999999999987653
No 29
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.2e-69 Score=608.15 Aligned_cols=507 Identities=20% Similarity=0.262 Sum_probs=417.2
Q ss_pred CCCCHHHHHHHHHH-hCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005406 77 EIGTLHDNFIYAVE-NYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (698)
Q Consensus 77 ~~~tl~~~l~~~a~-~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~ 155 (698)
....++++++++++ .+|+++|+.+. +.. ..+.+||+||.+++.++|++|.+.|+++|++|+++++|+++|++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~a~~~~---~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 115 (570)
T PRK04319 41 KVNIAYEAIDRHADGGRKDKVALRYL---DAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFAL 115 (570)
T ss_pred ceeHHHHHHHHhhccCCCCceEEEEE---CCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHH
Confidence 34556788888887 58999999775 322 3467999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEee
Q 005406 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (698)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (698)
|||+++|++++|+++.++.+++.++++++++++++++......... ..++.++.++.+++... ......+
T Consensus 116 la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~ 185 (570)
T PRK04319 116 LGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLPSLKHVLLVGEDVE--------EGPGTLD 185 (570)
T ss_pred HHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCCCceEEEEECCCcC--------CCcCccC
Confidence 9999999999999999999999999999999999998765443321 24556666666654321 0112245
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-
Q 005406 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN- 314 (698)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~- 314 (698)
+.+++..... ..+.....++++++|+|||||||.||||+++|+++++.+......+++.++|++++..|++|.++...
T Consensus 186 ~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~ 264 (570)
T PRK04319 186 FNALMEQASD-EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYG 264 (570)
T ss_pred HHHHHhhcCC-cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHH
Confidence 6666544322 22233456789999999999999999999999999988877777788899999999999999998765
Q ss_pred HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005406 315 QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (698)
Q Consensus 315 ~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (698)
.+.+++.|+++++.. +++..+++.|+++++|+++++|+++..+.+......
T Consensus 265 ~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--------------------------- 317 (570)
T PRK04319 265 IFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLV--------------------------- 317 (570)
T ss_pred HHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCccc---------------------------
Confidence 678899999999875 689999999999999999999999998865211000
Q ss_pred CchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCCCccCCCCC
Q 005406 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPA 471 (698)
Q Consensus 393 ~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~ 471 (698)
.....+++|.+++||+++++++.+++++.+|.++++.||+||+++.++..... ...++++|+|+|+
T Consensus 318 -------------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g 384 (570)
T PRK04319 318 -------------KKYDLSSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPG 384 (570)
T ss_pred -------------ccCCcccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCC
Confidence 00001489999999999999999999998999999999999998765443332 3457899999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCccEEEEeC--CCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEe
Q 005406 472 CEIKLVDVPEMNYTSEDQPHPRGEICVRG--PIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (698)
Q Consensus 472 ~~v~i~d~~~~~~~~~~~~~~~GEl~v~g--~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ik 549 (698)
++++|+| +++...+.+ +.|||+++| ++++.|||++++.|++.|. +|||+|||+|+++++|+++++||.||+||
T Consensus 385 ~~~~i~d-~~~~~~~~g---~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~ 459 (570)
T PRK04319 385 IEAAIVD-DQGNELPPN---RMGNLAIKKGWPSMMRGIWNNPEKYESYFA-GDWYVSGDSAYMDEDGYFWFQGRVDDVIK 459 (570)
T ss_pred CEEEEEC-CCCCCCCCC---CceEEEEcCCCChHHhHhcCCHHHhhhhhc-CCceEeCcEEEECCCeeEEEEecCCCEEE
Confidence 9999999 444444444 589999997 8999999999999999994 89999999999999999999999999999
Q ss_pred cCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHH
Q 005406 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAE 626 (698)
Q Consensus 550 ls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 626 (698)
+ +|++|+|.+||+++.+||.|.+++|+|.++ ++.++|+|++.++. . .. +.+.++
T Consensus 460 ~-~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~----------~--------~~----~~~~~~ 516 (570)
T PRK04319 460 T-SGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGY----------E--------PS----EELKEE 516 (570)
T ss_pred E-CCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCC----------C--------CC----HHHHHH
Confidence 7 899999999999999999999999999653 47788999887632 0 01 233556
Q ss_pred HHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHH
Q 005406 627 MNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERF 674 (698)
Q Consensus 627 l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~ 674 (698)
|+++++ .+|+.|++|+.|++++++| +|++||++|++|+++.
T Consensus 517 l~~~~~-~~l~~~~~P~~i~~v~~iP------~t~~GKv~r~~L~~~~ 557 (570)
T PRK04319 517 IRGFVK-KGLGAHAAPREIEFKDKLP------KTRSGKIMRRVLKAWE 557 (570)
T ss_pred HHHHHH-HhcccccCCcEEEEeCCCC------CCCchhhhHHHHHHHH
Confidence 777775 7899999999999999999 9999999999998874
No 30
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.7e-70 Score=533.29 Aligned_cols=500 Identities=21% Similarity=0.279 Sum_probs=431.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.+++.++|+++||++|+++. + +.+||+||+++++++|++|+++|+++||+|.+-++|..++++++|
T Consensus 26 ~d~~l~d~L~~~A~~~pdriAv~d~-----~----~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~F 96 (542)
T COG1021 26 QDRTLTDILTDHAARYPDRIAVIDG-----E----RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFF 96 (542)
T ss_pred cCCcHHHHHHHHHhhcCCceEEecC-----c----ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHH
Confidence 3578999999999999999999653 2 449999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc-----hHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCc
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT-----LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGV 231 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 231 (698)
|.+++|+.+|.--|.....++.+....++++.+|++... .....+...+.+.++.+++.++.+..
T Consensus 97 ALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~---------- 166 (542)
T COG1021 97 ALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHP---------- 166 (542)
T ss_pred HHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCc----------
Confidence 999999999999999999999999999999999988642 34456677788999999887554311
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHH
Q 005406 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYE 311 (698)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~ 311 (698)
...+..+........+..+.++++++++..+.||||.||.+..||.....++....+.+++++.+++|+.+|..|.|.
T Consensus 167 --~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfp 244 (542)
T COG1021 167 --SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFP 244 (542)
T ss_pred --chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCC
Confidence 112222333333344556678899999999999999999999999999988888888899999999999999999998
Q ss_pred HHH--HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Q 005406 312 RAN--QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIV 388 (698)
Q Consensus 312 ~~~--~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~ 388 (698)
+.. .+..++.|+++|+.+ .++...+..|+++++|+...||.+...|++.....
T Consensus 245 lssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~------------------------ 300 (542)
T COG1021 245 LSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWE------------------------ 300 (542)
T ss_pred CCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcc------------------------
Confidence 886 688899999999987 79999999999999999999999998888754321
Q ss_pred cCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCC-CCCCCCCccC
Q 005406 389 SGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK-GDNLSGHVGS 467 (698)
Q Consensus 389 ~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~-~~~~~~~vG~ 467 (698)
....++||.+-+||+.+++...+++...+||.+.+.+||.|.-...+-... .+....+-|+
T Consensus 301 ------------------~~~LsSLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGr 362 (542)
T COG1021 301 ------------------RADLSSLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGR 362 (542)
T ss_pred ------------------cCCchheeEEeecCcccCHHHHhhchhhhCchHHHHhhhhhhhhcccccCCchHheeecCCC
Confidence 111269999999999999999999999999999999999997544332221 1233467899
Q ss_pred CC-CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCC
Q 005406 468 PN-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKN 546 (698)
Q Consensus 468 p~-~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d 546 (698)
|+ |.-|++|+| ++++++.+|+ .|+|..|||..++|||+.|+.++.+|+.+|||+|||++++|+||+|.+.||.||
T Consensus 363 PlsP~DEvrvvD-~dg~pv~pGE---~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KD 438 (542)
T COG1021 363 PLSPDDEVRVVD-ADGNPVAPGE---VGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKD 438 (542)
T ss_pred cCCCcceeEEec-CCCCCCCCCC---cceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehh
Confidence 98 789999999 6677776665 999999999999999999999999999999999999999999999999999999
Q ss_pred eEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHH
Q 005406 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAV 623 (698)
Q Consensus 547 ~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 623 (698)
+|+ ++||+|..+|||+.|..||.|.+|++++.++ ++..+|+|++.+... +
T Consensus 439 QIN-RgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksCAfiv~~~~~~---------~----------------- 491 (542)
T COG1021 439 QIN-RGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSCAFIVVKEPPL---------R----------------- 491 (542)
T ss_pred hhc-cccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcceeEEEEecCCCC---------C-----------------
Confidence 999 7999999999999999999999999999765 689999999887431 1
Q ss_pred HHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 624 LAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 624 ~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
..+|+.++++.+|..|++|.+|.+++.+| +|+-|||++++|++.+..
T Consensus 492 ~~qlr~~L~~~GlAa~K~PDrie~v~~~P------~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 492 AAQLRRFLRERGLAAFKLPDRIEFVDSLP------LTAVGKIDKKALRRRLAS 538 (542)
T ss_pred HHHHHHHHHHcchhhhcCCcceeecccCC------CcccccccHHHHHHHhhh
Confidence 45677777788999999999999999999 999999999999998764
No 31
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-68 Score=598.98 Aligned_cols=512 Identities=26% Similarity=0.376 Sum_probs=408.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVD 155 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~e~~~~~ 155 (698)
...|+.++|++.++.+|+++|++.. + +.+||+||+++++++|++|.+ .|+++|++|+|+++|+++|++++
T Consensus 22 ~~~~~~~~l~~~a~~~p~~~al~~~----~-----~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~ 92 (562)
T PRK05677 22 EYPNIQAVLKQSCQRFADKPAFSNL----G-----KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAV 92 (562)
T ss_pred ccCcHHHHHHHHHHhCCCCeeEEEC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHH
Confidence 3468999999999999999999652 1 469999999999999999997 69999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCC-------------
Q 005406 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHL------------- 222 (698)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~------------- 222 (698)
|||+++|++++|+++.++.+++.+++++++++++|++......+.+..... ..+.++..+..+...
T Consensus 93 la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (562)
T PRK05677 93 FGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT-GVKHVIVTEVADMLPPLKRLLINAVVKH 171 (562)
T ss_pred HHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc-CcceeEEecccccccchhhhhcccchhh
Confidence 999999999999999999999999999999999999876655444433222 234444332111000
Q ss_pred -CCCCCC-CCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccc--cC-CC
Q 005406 223 -PSLPST-SGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ--FY-PS 297 (698)
Q Consensus 223 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~--~~-~~ 297 (698)
...... .......+.+.+..+...........++++++|+|||||||.||||+++|+++...+......+. +. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~ 251 (562)
T PRK05677 172 VKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGC 251 (562)
T ss_pred ccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCc
Confidence 000000 00012345555544332222233457899999999999999999999999999877654443332 33 34
Q ss_pred cEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHH
Q 005406 298 DIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREK 374 (698)
Q Consensus 298 d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 374 (698)
+++++.+|++|.+++.. .+..+..|++.++.+ .++..+++.|+++++|+++++|+++..+......
T Consensus 252 ~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----------- 320 (562)
T PRK05677 252 EILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAF----------- 320 (562)
T ss_pred cEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCccc-----------
Confidence 68899999999999875 556777888777665 5888999999999999999999999877652100
Q ss_pred HHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcc
Q 005406 375 LFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISA 454 (698)
Q Consensus 375 l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~ 454 (698)
+....+++|.+++||+++++++.+.|.+.+|+++++.||+||++.+++.
T Consensus 321 -------------------------------~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~ 369 (562)
T PRK05677 321 -------------------------------RKLDFSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETSPVVSV 369 (562)
T ss_pred -------------------------------ccCChhhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccccCcceee
Confidence 0000147999999999999999999999889999999999999877665
Q ss_pred cCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEec
Q 005406 455 IDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP 534 (698)
Q Consensus 455 ~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~ 534 (698)
.......++++|.|+++++++|+| +++..++.++ .|||+++|++++.||+++|+.|++.|+.+|||+|||+|++|+
T Consensus 370 ~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~ 445 (562)
T PRK05677 370 NPSQAIQVGTIGIPVPSTLCKVID-DDGNELPLGE---VGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQE 445 (562)
T ss_pred cCccCCCCCccCccCCCCEEEEEC-CCCCCCCCCC---CeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECC
Confidence 544445678899999999999999 4566666665 899999999999999999999999998899999999999999
Q ss_pred CCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHH
Q 005406 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLE 611 (698)
Q Consensus 535 ~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~ 611 (698)
+|.++|.||+||+||+ +|++|+|.+||+++.+||+|.+++|+|.++ ++.++++|++.+.. +.+
T Consensus 446 ~G~l~i~GR~~d~i~~-~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~--------~~~----- 511 (562)
T PRK05677 446 DGYMRIVDRKKDMILV-SGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGE--------TLT----- 511 (562)
T ss_pred CCcEEEEecCcCeEEe-CCEEECHHHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCC--------CCC-----
Confidence 9999999999999997 799999999999999999999999999654 46788888866421 011
Q ss_pred HhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 612 QLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 612 ~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
.++++++++ ..|++|++|+.|++++++| +|++||++|++|++.+.++
T Consensus 512 ------------~~~l~~~~~-~~l~~~~~P~~i~~v~~iP------~t~sGKi~r~~L~~~~~~~ 558 (562)
T PRK05677 512 ------------KEQVMEHMR-ANLTGYKVPKAVEFRDELP------TTNVGKILRRELRDEELKK 558 (562)
T ss_pred ------------HHHHHHHHH-HhhhhccCCcEEEEeccCC------CCCcccccHHHHHHHHHHh
Confidence 245555664 6799999999999999999 9999999999999876543
No 32
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=6.1e-68 Score=605.61 Aligned_cols=512 Identities=17% Similarity=0.181 Sum_probs=396.7
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
.|+.+.+.+ +.++++|+++. +. .+..+.+||+||.+++.++|++|+++|+++||+|+|+++|++++++++|||
T Consensus 87 ~n~~~~~~~---~~~~~~a~~~~---~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~ 159 (652)
T TIGR01217 87 LNYAENLLR---AAGTEPALLYV---DE-THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLAT 159 (652)
T ss_pred eeHHHHHhc---cCCCCeEEEEE---CC-CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 344444433 36789999775 22 234578999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc---------hHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCC
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTS 229 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~---------~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~ 229 (698)
+++|++++|+++.++.+++.+++++++++++|+++.. ...+.++...++.++.+++++.............
T Consensus 160 ~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 239 (652)
T TIGR01217 160 ASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKID 239 (652)
T ss_pred HHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccccccccc
Confidence 9999999999999999999999999999999998643 3445555556677777776643221100000001
Q ss_pred CceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHH-HHHhcccccccCCCcEEEEcCChhh
Q 005406 230 GVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLIS-NVAGFSLMVQFYPSDIYMSYLPLAH 308 (698)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~d~~l~~~pl~h 308 (698)
....|+++...............++++++|+|||||||.||||+++|++++. ........+++.++|++++++|+.|
T Consensus 240 --~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 317 (652)
T TIGR01217 240 --GALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGW 317 (652)
T ss_pred --CcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcch
Confidence 1246777765422211222345679999999999999999999999999654 3444444578899999999999999
Q ss_pred HHHHHHHHHHHHhCcEEEEeCC-----ChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 005406 309 IYERANQIVSVYYGVAVGFYQG-----DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSK 383 (698)
Q Consensus 309 ~~~~~~~~~~l~~G~~~~~~~~-----~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k 383 (698)
++. ...+.+++.|++++++++ ++..+++.++++++|++..+|.++..+....
T Consensus 318 ~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~---------------------- 374 (652)
T TIGR01217 318 MMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAG---------------------- 374 (652)
T ss_pred hhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcC----------------------
Confidence 864 335578999999999862 6788999999999999988777765553310
Q ss_pred HHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC--CceecccCcchhcchhcccCC-CCC
Q 005406 384 KQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG--CQVMEGYGMTETSCIISAIDK-GDN 460 (698)
Q Consensus 384 ~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g--~~l~~~YG~TE~~~~~~~~~~-~~~ 460 (698)
..+...++ .++||.+++||+++++++.+++.+.++ +.+.+.||+||+++......+ ...
T Consensus 375 -------~~~~~~~~-----------l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~ 436 (652)
T TIGR01217 375 -------VHPARTHD-----------LSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPV 436 (652)
T ss_pred -------CCccccCC-----------hhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCC
Confidence 00000011 158999999999999999999988775 457799999997543332222 224
Q ss_pred CCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCC--CccccccCChhhhc---cccc-CCCceecCcEEEEec
Q 005406 461 LSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP--IVFQGYYKNEVQTR---EVID-GDGWLHTGDIGLWLP 534 (698)
Q Consensus 461 ~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~--~~~~GY~~~~~~t~---~~f~-~~gw~~TGDlg~~~~ 534 (698)
..+++|.|.+|++++|+| ++++.+ . ++.|||+++|| +++.|||++++.|+ ..|. .+|||+|||+|++|+
T Consensus 437 ~~g~~g~p~~g~~v~ivd-~~g~~~-~---g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~ 511 (652)
T TIGR01217 437 HIGEIQAPGLGTAVQSWD-PEGKPV-T---GEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTP 511 (652)
T ss_pred cCCccCCCcCCCceEEEC-CCCCCC-C---CCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECC
Confidence 468899999999999999 455544 2 35899999996 68999999998764 2232 378999999999999
Q ss_pred CCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHH
Q 005406 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLE 611 (698)
Q Consensus 535 ~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~ 611 (698)
||+|+|+||.||+||+ +|++|+|.|||++|.+||.|.+|+|+|.++ ++.++|+|++.++. +
T Consensus 512 dG~l~i~GR~dd~I~~-~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~~~~~----------~----- 575 (652)
T TIGR01217 512 RGGIVIHGRSDSTLNP-QGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHLAPGA----------T----- 575 (652)
T ss_pred CCcEEEEecccCeEec-CCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEECCCC----------C-----
Confidence 9999999999999996 899999999999999999999999999654 47899999987632 0
Q ss_pred HhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 612 QLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 612 ~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
.+ +.+.++|+++++ .+|+.|++|+.|++++++| +|++||++|+.|++.+.
T Consensus 576 ---~~----~~~~~~l~~~~~-~~l~~~~~P~~i~~v~~lP------~T~sGKi~r~~Lr~~~~ 625 (652)
T TIGR01217 576 ---LD----DALLDRIKRTIR-AGLSPRHVPDEIIEVPGIP------HTLTGKRVEVAVKRVLQ 625 (652)
T ss_pred ---CC----HHHHHHHHHHHH-hhCCCCcCCCEEEECCCCC------CCCCccChHHHHHHHHc
Confidence 01 233566777775 7899999999999999999 99999999999998864
No 33
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.6e-68 Score=606.54 Aligned_cols=523 Identities=18% Similarity=0.182 Sum_probs=409.6
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
.+..+++|+++++.+|+++|+++. +...+..+.+||+||.++++++|++|+++|+++||+|+++++|+++++++++|
T Consensus 52 ~n~~~~~l~~~~~~~p~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 128 (629)
T PRK10524 52 TNLCHNAVDRHLAKRPEQLALIAV---STETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLA 128 (629)
T ss_pred eeHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 344688898988899999999874 22223457899999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc---------hHHHHhhhhcC-CceeEEEEeCCCCCCCCCCCC
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEI-PSVHLIVVVGGKDEHLPSLPS 227 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~---------~~~~~~~~~~~-~~~~~ii~~~~~~~~~~~~~~ 227 (698)
|+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.++.... +....+++++.......
T Consensus 129 ~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---- 204 (629)
T PRK10524 129 CARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMA---- 204 (629)
T ss_pred HHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcC----
Confidence 99999999999999999999999999999999997642 22333333222 23345555543211100
Q ss_pred CCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHH-hcccccccCCCcEEEEcCCh
Q 005406 228 TSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVA-GFSLMVQFYPSDIYMSYLPL 306 (698)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~~~pl 306 (698)
........+.++.........+.....++++++|+|||||||.||||+++|++++.... .....+++.++|++++.+|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 284 (629)
T PRK10524 205 RVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDI 284 (629)
T ss_pred cccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCC
Confidence 00011235666554322212222235678999999999999999999999999764443 33344678899999999999
Q ss_pred hhHHHHHH-HHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 005406 307 AHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAY 380 (698)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 380 (698)
+|.++... ++.+++.|+++++++ .++..+++.++++++|++.++|+++..+.+......
T Consensus 285 ~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~--------------- 349 (629)
T PRK10524 285 GWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALL--------------- 349 (629)
T ss_pred CeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccc---------------
Confidence 99988654 678899999999876 367889999999999999999999987755210000
Q ss_pred HHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCC---
Q 005406 381 NSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK--- 457 (698)
Q Consensus 381 ~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~--- 457 (698)
+....+++|.+++||+++++++.+++.+.+++++++.||+||++..+.....
T Consensus 350 -------------------------~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~ 404 (629)
T PRK10524 350 -------------------------RKHDLSSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGVE 404 (629)
T ss_pred -------------------------cccChhheeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCcc
Confidence 0000158999999999999999999999899999999999999853332222
Q ss_pred -CCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCC---CccccccCChhhhcccc---cCCCceecCcEE
Q 005406 458 -GDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP---IVFQGYYKNEVQTREVI---DGDGWLHTGDIG 530 (698)
Q Consensus 458 -~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~---~~~~GY~~~~~~t~~~f---~~~gw~~TGDlg 530 (698)
.....+++|.|+++++++|+|.+++..++.+. .|||+++|| +++.|||++++.+.+.+ ..+|||+|||+|
T Consensus 405 ~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~---~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~ 481 (629)
T PRK10524 405 DRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNE---KGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWG 481 (629)
T ss_pred cCcCCCCCcccCcCCceEEEEeCCCCCCCCCCC---cEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcE
Confidence 12346889999999999999954666665554 899999998 57899999998876643 146899999999
Q ss_pred EEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCc
Q 005406 531 LWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKF 607 (698)
Q Consensus 531 ~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~ 607 (698)
++|+||+++|+||.||+||+ +|++|+|.|||++|.+||+|.+|+|+|.++ ++.++++|++.+... .
T Consensus 482 ~~d~dG~l~i~GR~dd~i~~-~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~--------~-- 550 (629)
T PRK10524 482 IRDADGYYFILGRTDDVINV-AGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDS--------L-- 550 (629)
T ss_pred EEcCCCcEEEEEEecCeEEe-CCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEEECCCCc--------c--
Confidence 99999999999999999997 799999999999999999999999999654 468899999876320 0
Q ss_pred ccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 608 EDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 608 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
.+.+....+.++|+++++ .+|+.|++|+.|++++++| +|++||++|+.|++.+.
T Consensus 551 -------~~~~~~~~~~~~i~~~~~-~~l~~~~~P~~i~~v~~lP------~T~sGKi~R~~L~~~~~ 604 (629)
T PRK10524 551 -------ADREARLALEKEIMALVD-SQLGAVARPARVWFVSALP------KTRSGKLLRRAIQAIAE 604 (629)
T ss_pred -------ccccchHHHHHHHHHHHH-hhcCCCcCCCEEEEcCCCC------CCCCcchHHHHHHHHHc
Confidence 011122345667777775 7899999999999999999 99999999999998753
No 34
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8e-68 Score=607.32 Aligned_cols=511 Identities=18% Similarity=0.198 Sum_probs=401.3
Q ss_pred CHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005406 80 TLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (698)
Q Consensus 80 tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~ 159 (698)
|+.+.+.++ .+|+++|+++. +. .+..+.+||+||.+++.++|++|++.|+++||+|+|+++|++++++++|||+
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~---~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~ 160 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFR---GE-DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATA 160 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEE---CC-CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 454444432 58999999875 32 2446789999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc---------hHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCC
Q 005406 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT---------LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSG 230 (698)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~---------~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 230 (698)
++|++++|+++.++.+++.+++++++++++|+++.. ...+.++...++.++.++.++........ ...
T Consensus 161 ~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~ 237 (655)
T PRK03584 161 SLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAA---AAL 237 (655)
T ss_pred HcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccc---ccc
Confidence 999999999999999999999999999999997642 23344444456666666666532210000 011
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHH-HHhcccccccCCCcEEEEcCChhhH
Q 005406 231 VKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISN-VAGFSLMVQFYPSDIYMSYLPLAHI 309 (698)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l~~~pl~h~ 309 (698)
.....|++++..............++++++|+|||||||.||||++||++++.. +......+++.++|+++++.++.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 317 (655)
T PRK03584 238 PGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWM 317 (655)
T ss_pred CCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHH
Confidence 123467777653222222233456799999999999999999999999987643 4545556788999999999999998
Q ss_pred HHHHHHHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005406 310 YERANQIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (698)
Q Consensus 310 ~~~~~~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (698)
+.. ..+.+++.|+++++++ .++..+++.++++++|++.++|+++..+.+...
T Consensus 318 ~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---------------------- 374 (655)
T PRK03584 318 MWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGL---------------------- 374 (655)
T ss_pred hHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCC----------------------
Confidence 653 3567899999999976 378899999999999999999999987764200
Q ss_pred HHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh--CCceecccCcchhcchhcccCC-CCCC
Q 005406 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDK-GDNL 461 (698)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~--g~~l~~~YG~TE~~~~~~~~~~-~~~~ 461 (698)
.+...++ .++||.+++||+++++++.+++.+.+ ++.+.+.||+||+++......+ ....
T Consensus 375 -------~~~~~~~-----------l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~ 436 (655)
T PRK03584 375 -------VPGETHD-----------LSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVY 436 (655)
T ss_pred -------CccccCC-----------hhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcC
Confidence 0000011 15899999999999999999999887 4789999999998654332222 2345
Q ss_pred CCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCC--CccccccCChhhhc--cc-c-cCCCceecCcEEEEecC
Q 005406 462 SGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP--IVFQGYYKNEVQTR--EV-I-DGDGWLHTGDIGLWLPG 535 (698)
Q Consensus 462 ~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~--~~~~GY~~~~~~t~--~~-f-~~~gw~~TGDlg~~~~~ 535 (698)
.+++|.|.+|++++|+| +++... .+ +.|||+|+|| +++.|||++++.++ +. | ..+|||+|||+|++|+|
T Consensus 437 ~g~~g~p~~g~~~~ivd-~~g~~~-~g---~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~d 511 (655)
T PRK03584 437 RGEIQCRGLGMAVEAWD-EDGRPV-VG---EVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEH 511 (655)
T ss_pred CCccCCCcCCceeEEEC-CCCCCC-CC---CceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCC
Confidence 68899999999999999 455544 33 4899999996 79999999998654 11 2 12689999999999999
Q ss_pred CcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHH
Q 005406 536 GRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQ 612 (698)
Q Consensus 536 G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~ 612 (698)
|+|+|+||.||+||+ +|++|+|.|||++|.+||.|.+|+|+|.++ ++.++|+|++.++. .
T Consensus 512 G~l~i~GR~dd~Ik~-~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~----------~------ 574 (655)
T PRK03584 512 GGVVIYGRSDATLNR-GGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGV----------T------ 574 (655)
T ss_pred CeEEEEeeccCeeec-CcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCC----------C------
Confidence 999999999999996 899999999999999999999999999654 57899999987632 0
Q ss_pred hhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 613 LCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 613 ~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
.+ +.+.++|+++++ .+|+.|++|+.|++++++| +|++|||+|+.|++.+.
T Consensus 575 --~~----~~~~~~l~~~~~-~~L~~~~~P~~i~~v~~lP------~t~sGKi~r~~lr~~~~ 624 (655)
T PRK03584 575 --LD----DALRARIRTTIR-TNLSPRHVPDKIIAVPDIP------RTLSGKKVELPVKKLLH 624 (655)
T ss_pred --Cc----HHHHHHHHHHHH-hhCCCCcCCCEEEECCCCC------CCCCccchHHHHHHHHc
Confidence 01 233556777775 7899999999999999999 99999999999998874
No 35
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=5.2e-68 Score=598.39 Aligned_cols=498 Identities=24% Similarity=0.317 Sum_probs=398.3
Q ss_pred HHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005406 81 LHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHACS 159 (698)
Q Consensus 81 l~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~e~~~~~lA~~ 159 (698)
+..+|.+ +++|+++|+++. ++. ..+||+||.++++++|++|.+ .|+++||+|+|+++|+++|++++|||+
T Consensus 43 ~~~l~~~--~~~~~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~ 113 (560)
T PLN02574 43 VSFIFSH--HNHNGDTALIDS---STG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVL 113 (560)
T ss_pred HHHHhcC--cccCCCCEEEEC---CCC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHH
Confidence 3445544 679999998753 211 258999999999999999999 999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHH
Q 005406 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQL 239 (698)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (698)
++|++++|++|.++.+++.+++++++++++|++.+....+... ... ++.++...... ........|.++
T Consensus 114 ~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~-----~~~~~~~~~~~~ 182 (560)
T PLN02574 114 SLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL-----GVP-VIGVPENYDFD-----SKRIEFPKFYEL 182 (560)
T ss_pred HhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc-----CCc-EEecCcccccc-----cCccCcccHHHH
Confidence 9999999999999999999999999999999987765544321 111 22222110000 000112345665
Q ss_pred HhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc----cccc-CCCcEEEEcCChhhHHHHHH
Q 005406 240 QSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL----MVQF-YPSDIYMSYLPLAHIYERAN 314 (698)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~-~~~d~~l~~~pl~h~~~~~~ 314 (698)
...... ..+.....++++++|+|||||||.||||++||+++.+.+..+.. .... ...+++++.+|++|.+++..
T Consensus 183 ~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 261 (560)
T PLN02574 183 IKEDFD-FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSL 261 (560)
T ss_pred hhcCCc-ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHH
Confidence 544322 11223346789999999999999999999999999887765432 1222 35689999999999999877
Q ss_pred -HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005406 315 -QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (698)
Q Consensus 315 -~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (698)
.+.++..|+++++.+ +++..+++.++++++|++.++|+++..|.+.....
T Consensus 262 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~---------------------------- 313 (560)
T PLN02574 262 FVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGV---------------------------- 313 (560)
T ss_pred HHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCcccc----------------------------
Confidence 456778899998887 79999999999999999999999999887631100
Q ss_pred CchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCC--CCCCCCCccCCC
Q 005406 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDK--GDNLSGHVGSPN 469 (698)
Q Consensus 393 ~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~--~~~~~~~vG~p~ 469 (698)
.....+++|.+++||+++++++.+.+.+.+ ++.++++||+||++.+++.... .....+++|.|.
T Consensus 314 -------------~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~ 380 (560)
T PLN02574 314 -------------CGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLA 380 (560)
T ss_pred -------------ccCccccceEEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeC
Confidence 000115899999999999999999988877 7899999999999865443221 124567899999
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEe
Q 005406 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (698)
Q Consensus 470 ~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ik 549 (698)
++++++|+|++++..++.++ .|||||+|++++.|||++++.|++.|+.+|||+|||+|++|++|+++|+||+||+||
T Consensus 381 ~~~~v~i~d~~~g~~~~~g~---~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~ 457 (560)
T PLN02574 381 PNMQAKVVDWSTGCLLPPGN---CGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIK 457 (560)
T ss_pred CCcEEEEEeCCCCcCCCCCC---CeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheE
Confidence 99999999977777666665 899999999999999999999999998899999999999999999999999999999
Q ss_pred cCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHH
Q 005406 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAE 626 (698)
Q Consensus 550 ls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 626 (698)
+ +|++|+|.|||++|.+||.|.+++|++.++ ++.++++|++.++. ..+ .++
T Consensus 458 ~-~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~v~~~~~~--------~~~-----------------~~~ 511 (560)
T PLN02574 458 Y-KGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEIPVAFVVRRQGS--------TLS-----------------QEA 511 (560)
T ss_pred E-CCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcceEEEEEeCCCC--------CCC-----------------HHH
Confidence 7 799999999999999999999999998544 46788999877531 011 245
Q ss_pred HHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 627 MNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 627 l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
|.++++ .+|+.|++|+.|.+++++| +|++||++|+.|++.+.+
T Consensus 512 l~~~~~-~~l~~~~~p~~v~~v~~iP------~t~~GKi~r~~L~~~~~~ 554 (560)
T PLN02574 512 VINYVA-KQVAPYKKVRKVVFVQSIP------KSPAGKILRRELKRSLTN 554 (560)
T ss_pred HHHHHH-HhccCcccCcEEEEeeccC------CCCcchhhHHHHHHHHhh
Confidence 566664 6799999999999999999 999999999999988753
No 36
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.3e-67 Score=593.05 Aligned_cols=501 Identities=25% Similarity=0.348 Sum_probs=413.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005406 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (698)
Q Consensus 76 ~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~ 155 (698)
++..|+.+++.++++++|+++|+.+. +. .+.+||.||.++++++|++|.+.|+++||+|+++++|+++|++++
T Consensus 20 ~~~~~~~~~l~~~~~~~~~~~a~~~~---~~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~ 92 (537)
T PLN02246 20 PNHLPLHDYCFERLSEFSDRPCLIDG---AT----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAF 92 (537)
T ss_pred CCCCcHHHHHHHHHHhCCCCeEEEec---CC----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHH
Confidence 45678999999999999999998753 21 256999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEee
Q 005406 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (698)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (698)
+||+++|++++|+++.++.+++..+++.++++++|++......+...... +.+ .++.+++.. .....
T Consensus 93 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~-~~i~~~~~~-----------~~~~~ 159 (537)
T PLN02246 93 LGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED-DGV-TVVTIDDPP-----------EGCLH 159 (537)
T ss_pred HHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc-CCc-eEEEeCCCC-----------CCcee
Confidence 99999999999999999999999999999999999988776655544321 222 344443321 01234
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc----ccccCCCcEEEEcCChhhHHH
Q 005406 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL----MVQFYPSDIYMSYLPLAHIYE 311 (698)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~~ 311 (698)
+.++..... ...+.....++++++++|||||||.||||+++|++++..+..... .+++.++|++++.+|++|.++
T Consensus 160 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~ 238 (537)
T PLN02246 160 FSELTQADE-NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYS 238 (537)
T ss_pred HHHHhcCCC-CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHH
Confidence 555543321 122233456899999999999999999999999999887765432 467889999999999999999
Q ss_pred HHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005406 312 RAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (698)
Q Consensus 312 ~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (698)
+.. .+.++..|+++++.+ .++..+++.++++++|++.++|+++..|.+....
T Consensus 239 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-------------------------- 292 (537)
T PLN02246 239 LNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVV-------------------------- 292 (537)
T ss_pred HHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccc--------------------------
Confidence 876 567899999999988 6899999999999999999999998887652100
Q ss_pred CCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccC-----CCCCCCC
Q 005406 390 GQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAID-----KGDNLSG 463 (698)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~-----~~~~~~~ 463 (698)
.....+++|.+++||+++++++.+++++.+ ++.+++.||+||++.+++... .....++
T Consensus 293 ----------------~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 356 (537)
T PLN02246 293 ----------------EKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSG 356 (537)
T ss_pred ----------------cccCccceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCC
Confidence 000014799999999999999999999987 678999999999987654321 1123567
Q ss_pred CccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEcc
Q 005406 464 HVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDR 543 (698)
Q Consensus 464 ~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR 543 (698)
++|+|+++++++|+|++++..++.+. .|||+++|++++.|||++++.|++.|+.+|||+|||+|+++++|+++++||
T Consensus 357 ~~G~~~~~~~~~i~d~~~~~~~~~g~---~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR 433 (537)
T PLN02246 357 SCGTVVRNAELKIVDPETGASLPRNQ---PGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDR 433 (537)
T ss_pred ccccccCCcEEEEecCCCCCcCCCCC---ceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEec
Confidence 89999999999999966666666665 899999999999999999999999998899999999999999999999999
Q ss_pred CCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHH
Q 005406 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRAR 620 (698)
Q Consensus 544 ~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (698)
.||+||+ +|++|+|.+||+.+.++|+|.+++|++.++ ++.++++|++.++. ..
T Consensus 434 ~dd~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~--------------- 489 (537)
T PLN02246 434 LKELIKY-KGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEVPVAFVVRSNGS--------EI--------------- 489 (537)
T ss_pred ccceEEE-CCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCceeEEEEEeCCCC--------CC---------------
Confidence 9999997 799999999999999999999999998543 46788898877532 00
Q ss_pred HHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 621 AAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 621 ~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
..++|+++++ .+|+.|++|+.|++++++| +|++||++|++|++.+.
T Consensus 490 --~~~~l~~~l~-~~l~~~~~p~~i~~~~~~P------~t~~GKi~r~~L~~~~~ 535 (537)
T PLN02246 490 --TEDEIKQFVA-KQVVFYKRIHKVFFVDSIP------KAPSGKILRKDLRAKLA 535 (537)
T ss_pred --CHHHHHHHHH-hhCcCccccceEEEeccCC------CCCcchhhHHHHHHHHh
Confidence 1345666664 6899999999999999999 99999999999998874
No 37
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.7e-68 Score=595.39 Aligned_cols=507 Identities=20% Similarity=0.239 Sum_probs=396.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.+.|.+.++++|+++|+... ++ .+.+||+||.++++++|++|.+.|+++|++|+|+++|+++|+++++
T Consensus 12 ~~~~~~~~l~~~a~~~p~~~a~~~~---~~----~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~l 84 (540)
T PRK05857 12 LPSTVLDRVFEQARQQPEAIALRRC---DG----TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVL 84 (540)
T ss_pred CCcchHHHHHHHHhhCCCcEEEeec---CC----CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHH
Confidence 3467899999999999999999754 33 2459999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|+++.++.+++.++++.++++++|++................+. ++..+..... . . +
T Consensus 85 A~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~---------~-~ 151 (540)
T PRK05857 85 ACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIP-VIAVDIAAVT--R---------E-S 151 (540)
T ss_pred HHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccc-eeEeeccccc--c---------c-c
Confidence 999999999999999999999999999999999998764322111111111222 2222211100 0 0 0
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcc----cccccCCCcEEEEcCChhhHHHH
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFS----LMVQFYPSDIYMSYLPLAHIYER 312 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~----~~~~~~~~d~~l~~~pl~h~~~~ 312 (698)
.+.... ..........++++++++|||||||.||||++||+++.+...... ..+.+..+++.++.+|++|.+++
T Consensus 152 ~~~~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l 229 (540)
T PRK05857 152 EHSLDA--ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGL 229 (540)
T ss_pred cccccc--cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchH
Confidence 000000 001112234678999999999999999999999999987654322 12455678899999999999999
Q ss_pred HHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005406 313 ANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (698)
Q Consensus 313 ~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (698)
...+.+++.|+++++.+.++..+++.++++++|.++++|+++..+.+.....
T Consensus 230 ~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~---------------------------- 281 (540)
T PRK05857 230 WWILTCLMHGGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSA---------------------------- 281 (540)
T ss_pred HHHHHHhhcceeEEecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccC----------------------------
Confidence 8888899999998877788999999999999999999999998887531100
Q ss_pred CchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC-----CCCCCccC
Q 005406 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD-----NLSGHVGS 467 (698)
Q Consensus 393 ~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-----~~~~~vG~ 467 (698)
....+++|.+++||++++....+++. .+|+++++.||+||++.......... ...+++|+
T Consensus 282 --------------~~~~~~lr~~~~gG~~~~~~~~~~~~-~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~ 346 (540)
T PRK05857 282 --------------NATVPSLRLVGYGGSRAIAADVRFIE-ATGVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGR 346 (540)
T ss_pred --------------CCcCccceEEEEcCccCCchhHHHHH-HhCCeeecccCCCcCCceeeecccccccccccccCCcCc
Confidence 00115899999999999988876554 67999999999999975433222211 24578999
Q ss_pred CCCCcEEEEEecCCCCCCCC--CCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCC
Q 005406 468 PNPACEIKLVDVPEMNYTSE--DQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKK 545 (698)
Q Consensus 468 p~~~~~v~i~d~~~~~~~~~--~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~ 545 (698)
|++|++++|+|.++....+. ...++.|||+++|++++.|||++++.|++.| .+|||+|||+|++|++|++++.||.|
T Consensus 347 ~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDlg~~d~~g~l~~~GR~~ 425 (540)
T PRK05857 347 PYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWVNTGDLLERREDGFFYIKGRSS 425 (540)
T ss_pred ccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCceeccceEEEcCCceEEEecccc
Confidence 99999999998543323222 1224589999999999999999999999999 68999999999999999999999999
Q ss_pred CeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHH
Q 005406 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAA 622 (698)
Q Consensus 546 d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (698)
|+||+ +|++|+|.|||+++..||+|.+|+|++.++ ++.++++|++.+.. +....+.
T Consensus 426 ~~ik~-~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~--------------------~~~~~~~ 484 (540)
T PRK05857 426 EMIIC-GGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVASAEL--------------------DESAARA 484 (540)
T ss_pred ccEec-CCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEeCCCC--------------------ChhhHHH
Confidence 99996 899999999999999999999999999654 34666777665421 1111233
Q ss_pred HHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 623 VLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 623 i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
+.+.+.+.++ ..++.|++|+.|++++++| +|++||++|++|++.++..
T Consensus 485 l~~~~~~~~~-~~l~~~~~P~~v~~~~~iP------~t~~GKi~r~~l~~~~~~~ 532 (540)
T PRK05857 485 LKHTIAARFR-RESEPMARPSTIVIVTDIP------RTQSGKVMRASLAAAATAD 532 (540)
T ss_pred HHHHHHHHHH-hhhccccCCeEEEEhhcCC------CCCCcceeHHHHHHhhhhc
Confidence 4555666664 6799999999999999999 9999999999999888754
No 38
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-67 Score=595.52 Aligned_cols=504 Identities=23% Similarity=0.328 Sum_probs=394.5
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCc----cCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGT----VGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLI 153 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~----~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~ 153 (698)
..|+.++|.+.++++|+++|+.+. ++. ...++.+||+||.++++++|++|.+.|+++||+|+++++|+++|++
T Consensus 5 ~~~~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~ 81 (552)
T PRK09274 5 MANIARHLPRAAQERPDQLAVAVP---GGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFA 81 (552)
T ss_pred hhhHHHHHHHHHHhCCCcceEEec---cCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHH
Confidence 357889999999999999999764 221 1124579999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEeccc--chHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCc
Q 005406 154 VDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ--TLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGV 231 (698)
Q Consensus 154 ~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 231 (698)
+++||+++|++++|+++.++.+++.+++++++++++|++.. ....+... .....+.++.++... ..
T Consensus 82 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~----------~~ 149 (552)
T PRK09274 82 LTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGW--GKPSVRRLVTVGGRL----------LW 149 (552)
T ss_pred HHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhcc--Cccchhheecccccc----------cc
Confidence 99999999999999999999999999999999999998752 11111111 011222333332210 00
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHH
Q 005406 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYE 311 (698)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~ 311 (698)
....++++...............++++++|+|||||||.||||++||+++.+.+......+++.++|+.++.+|++|.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~ 229 (552)
T PRK09274 150 GGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALFG 229 (552)
T ss_pred CCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhhh
Confidence 11234444322211122233456799999999999999999999999999998887777788999999999999988654
Q ss_pred HHHHHHHHHhCcEEEEeC--------CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 005406 312 RANQIVSVYYGVAVGFYQ--------GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSK 383 (698)
Q Consensus 312 ~~~~~~~l~~G~~~~~~~--------~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k 383 (698)
+..|+++++.+ .++..+++.|+++++|+++++|+++..|.+.....
T Consensus 230 -------~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------------------- 283 (552)
T PRK09274 230 -------PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEAN------------------- 283 (552)
T ss_pred -------hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhc-------------------
Confidence 34577777653 47889999999999999999999999887632110
Q ss_pred HHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh--CCceecccCcchhcchhcccCCC---
Q 005406 384 KQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDKG--- 458 (698)
Q Consensus 384 ~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~--g~~l~~~YG~TE~~~~~~~~~~~--- 458 (698)
....+++|.+++||+++++++.+++++.+ |+++++.||+||++++++.....
T Consensus 284 -----------------------~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~ 340 (552)
T PRK09274 284 -----------------------GIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILF 340 (552)
T ss_pred -----------------------CCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhc
Confidence 00115899999999999999999999988 57999999999998765433211
Q ss_pred -------CCCCCCccCCCCCcEEEEEecCC--------CCCCCCCCCCCccEEEEeCCCccccccCChhhhcccc--cCC
Q 005406 459 -------DNLSGHVGSPNPACEIKLVDVPE--------MNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI--DGD 521 (698)
Q Consensus 459 -------~~~~~~vG~p~~~~~v~i~d~~~--------~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f--~~~ 521 (698)
.....++|+|+++++++|+|..+ +..++.+ +.|||+++|++++.|||++|+.|...| +.+
T Consensus 341 ~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g---~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~ 417 (552)
T PRK09274 341 ATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATG---EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQ 417 (552)
T ss_pred cccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCC---CeeEEEEecCcccccccCChHHhhhhhcccCC
Confidence 11234799999999999999532 2333434 489999999999999999999998876 446
Q ss_pred C--ceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC--CCeEEEEEEcChhHHH
Q 005406 522 G--WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF--NSCLVAIVAVDPDVLK 597 (698)
Q Consensus 522 g--w~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~--~~~~va~vv~~~~~~~ 597 (698)
| ||+|||+|++|+||+|+|+||.||+||+ +|++|+|.|||++|.+||+|.+|+|++.++ ++.++++|++.+...
T Consensus 418 g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~~v~~~~~~~- 495 (552)
T PRK09274 418 GDVWHRMGDLGYLDAQGRLWFCGRKAHRVET-AGGTLYTIPCERIFNTHPGVKRSALVGVGVPGAQRPVLCVELEPGVA- 495 (552)
T ss_pred CCcEEEcCCEEEEccCCcEEEEeccCCeEEE-CCEEECcHHHHHHHHhCcccceeEEEEeCCCCCceEEEEEEccCccc-
Confidence 6 9999999999999999999999999997 899999999999999999999999998543 356888888776320
Q ss_pred HHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccC--cccCCChHHHHHHHH
Q 005406 598 DWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLT--PTFKIKRPQAKERFA 675 (698)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T--~~GKi~R~~l~~~~~ 675 (698)
. .. +.+.+++++.++ .++.++.|+.+++++++| +| ++|||+|++|++++.
T Consensus 496 -------~---------~~----~~l~~~l~~~l~--~~~~~~~~~~~~~~~~lP------~t~~~~GKi~r~~L~~~~~ 547 (552)
T PRK09274 496 -------C---------SK----SALYQELRALAA--AHPHTAGIERFLIHPSFP------VDIRHNAKIFREKLAVWAA 547 (552)
T ss_pred -------c---------ch----HHHhhhhHHHHH--hcCCCcceeEEeccCCCC------ccccccccccHHHHHHHHH
Confidence 0 11 123455555553 345677889999999999 98 799999999999987
Q ss_pred HHH
Q 005406 676 KAI 678 (698)
Q Consensus 676 ~~i 678 (698)
+.+
T Consensus 548 ~~~ 550 (552)
T PRK09274 548 KQL 550 (552)
T ss_pred Hhh
Confidence 765
No 39
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-67 Score=592.90 Aligned_cols=489 Identities=20% Similarity=0.255 Sum_probs=403.2
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
.++.++|.+.++++||++|+... + +.+||+||+++++++|++|.++|+++|++|+++++|+++|+++++||
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 113 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDE---L------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAA 113 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeC---C------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHH
Confidence 57999999999999999999753 2 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHH
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (698)
+++|++++|+++.++.+++.+++++++++++|++......+.......+....++..++.. ....+++
T Consensus 114 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 181 (537)
T PRK13382 114 NRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDED------------HDLTVEV 181 (537)
T ss_pred HHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCc------------ccccHHH
Confidence 9999999999999999999999999999999999776655554433334333344332211 0124454
Q ss_pred HHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHH
Q 005406 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVS 318 (698)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 318 (698)
+...... ......+++.++++|||||||.||||+++|+++..........+.+..++++++.+|++|.+++...+.+
T Consensus 182 ~~~~~~~---~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 258 (537)
T PRK13382 182 LIAAHAG---QRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLA 258 (537)
T ss_pred HhhccCc---CCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHH
Confidence 4433211 1112356889999999999999999999999998887777667778899999999999999999878889
Q ss_pred HHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhh
Q 005406 319 VYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (698)
Q Consensus 319 l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (698)
+..|+++++.. +++..+++.|+++++|++.++|+++..+.+......
T Consensus 259 l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-------------------------------- 306 (537)
T PRK13382 259 ASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVR-------------------------------- 306 (537)
T ss_pred HhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhc--------------------------------
Confidence 99999998876 789999999999999999999999998865211000
Q ss_pred HHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCCCccCCCCCcEEEE
Q 005406 398 DRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKL 476 (698)
Q Consensus 398 d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i 476 (698)
....+.++|.+++||+++++++.+.|.+.++.++++.||+||++.+++..... ....+++|+|+++++++|
T Consensus 307 --------~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i 378 (537)
T PRK13382 307 --------NRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRI 378 (537)
T ss_pred --------ccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCcceecChhHhccCCCCccccCcCcEEEE
Confidence 00011479999999999999999999998999999999999998766543321 245679999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceee
Q 005406 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYV 556 (698)
Q Consensus 477 ~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v 556 (698)
+| +++..++.+. .|||+++|++++.||+ ++.+.. | .+|||+|||+++++++|+++|+||+||+||. +|++|
T Consensus 379 ~d-~~~~~~~~g~---~GEl~v~g~~~~~gY~--~~~~~~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~-~G~~v 449 (537)
T PRK13382 379 LD-QDFREVPTGE---VGTIFVRNDTQFDGYT--SGSTKD-F-HDGFMASGDVGYLDENGRLFVVGRDDEMIVS-GGENV 449 (537)
T ss_pred EC-CCCCCCCCCC---eeEEEEEcCCcccCcc--ccchhh-c-cCCCEeeCceEEEeCCCcEEEeccccceeEE-CCEEE
Confidence 99 4556665554 8999999999999998 555554 4 4799999999999999999999999999996 89999
Q ss_pred cchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHh
Q 005406 557 APEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKE 633 (698)
Q Consensus 557 ~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 633 (698)
+|.+||+++.++|+|.+++|++.++ ++.++++|++.++. . ...++++++++
T Consensus 450 ~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~--------~-----------------~~~~~l~~~l~- 503 (537)
T PRK13382 450 YPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGA--------S-----------------ATPETLKQHVR- 503 (537)
T ss_pred CHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCC--------C-----------------CCHHHHHHHHH-
Confidence 9999999999999999999999654 46789999987632 0 11345666665
Q ss_pred CCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHH
Q 005406 634 GQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKE 672 (698)
Q Consensus 634 ~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~ 672 (698)
..|+.|++|+.+++++++| +|++||++|++|++
T Consensus 504 ~~l~~~~~P~~i~~v~~lP------~t~~gK~~r~~L~~ 536 (537)
T PRK13382 504 DNLANYKVPRDIVVLDELP------RGATGKILRRELQA 536 (537)
T ss_pred HhccCCCCCcEEEEeccCC------CCCCCCCcHHhhCC
Confidence 7899999999999999999 99999999999864
No 40
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-67 Score=593.40 Aligned_cols=511 Identities=23% Similarity=0.342 Sum_probs=419.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCHhHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH-GLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
..|+.++|.+.++++|+++|+.+. + +.+||+||.+++.++|.+|.+. |+++|++|+|+++|+++|+++++
T Consensus 9 ~~tl~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 79 (546)
T PRK08314 9 ETSLFHNLEVSARRYPDKTAIVFY---G------RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYY 79 (546)
T ss_pred CCCHHHHHHHHHHHcCCCcceeec---C------ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHH
Confidence 468999999999999999999764 2 3599999999999999999999 99999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCC-------CCCC-----
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDE-------HLPS----- 224 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-------~~~~----- 224 (698)
||+++|++++|+++.++.+++.++++++++++++++.+....+......+ .++.+++.+.... ....
T Consensus 80 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (546)
T PRK08314 80 AILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL-RLRHVIVAQYSDYLPAEPEIAVPAWLRAE 158 (546)
T ss_pred HHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc-CcceEEEecchhhcccccccCcccccccc
Confidence 99999999999999999999999999999999999987766665544333 2333333221100 0000
Q ss_pred --CCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEE
Q 005406 225 --LPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMS 302 (698)
Q Consensus 225 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~ 302 (698)
.....+..+..|++...... ........++++++|+|||||||.||||++||+++++.+......+++..+|++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~ 236 (546)
T PRK08314 159 PPLQALAPGGVVAWKEALAAGL--APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLA 236 (546)
T ss_pred cccccccccccccHHHHhcccC--CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEE
Confidence 00001123345666654322 12233457899999999999999999999999999998887777788899999999
Q ss_pred cCChhhHHHHHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 005406 303 YLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAY 380 (698)
Q Consensus 303 ~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 380 (698)
++|++|.+++.. .+.++..|+++++.+ .++..+++.++++++|++.++|.++..+.....
T Consensus 237 ~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~------------------ 298 (546)
T PRK08314 237 VLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPG------------------ 298 (546)
T ss_pred EcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCC------------------
Confidence 999999999876 667899999999988 689999999999999999999999887764200
Q ss_pred HHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCC
Q 005406 381 NSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDN 460 (698)
Q Consensus 381 ~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~ 460 (698)
.. ....+++|.+++||+++++++.+++.+.+++++++.||+||++..+........
T Consensus 299 ----------------~~--------~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~ 354 (546)
T PRK08314 299 ----------------LA--------ERDLSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPDRP 354 (546)
T ss_pred ----------------cc--------ccCchhhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccceecCCCcCC
Confidence 00 000147999999999999999999999889999999999999876665544445
Q ss_pred CCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhccccc---CCCceecCcEEEEecCCc
Q 005406 461 LSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID---GDGWLHTGDIGLWLPGGR 537 (698)
Q Consensus 461 ~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~---~~gw~~TGDlg~~~~~G~ 537 (698)
..+++|.|+++++++|+|++++..++.+. .|||+++|++++.||+++++.|++.|. +++||+|||+|+++++|.
T Consensus 355 ~~~~~G~~~~g~~~~i~d~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~ 431 (546)
T PRK08314 355 KLQCLGIPTFGVDARVIDPETLEELPPGE---VGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGY 431 (546)
T ss_pred CCCccCcccCCeEEEEEeCCCCcCCCCCC---ceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCc
Confidence 56789999999999999976777776665 899999999999999999999988873 346999999999999999
Q ss_pred EEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhh
Q 005406 538 LKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLC 614 (698)
Q Consensus 538 l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~ 614 (698)
+++.||.||+||+ +|++|+|.+||+++.++|+|.+++|++.++ ++.++|+|+++++... .
T Consensus 432 l~~~GR~~d~i~~-~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~--------~-------- 494 (546)
T PRK08314 432 FFITDRLKRMINA-SGFKVWPAEVENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARG--------K-------- 494 (546)
T ss_pred EEEEecchhhEEe-CCEEECHHHHHHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCC--------C--------
Confidence 9999999999997 799999999999999999999999998654 4678999998764200 0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 615 NDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 615 ~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
...++++++++ .+|+.|++|+.|++++++| +|++||++|++|++..+.
T Consensus 495 -------~~~~~l~~~~~-~~l~~~~~P~~~~~v~~iP------~t~~GKv~r~~L~~~~~~ 542 (546)
T PRK08314 495 -------TTEEEIIAWAR-EHMAAYKYPRIVEFVDSLP------KSGSGKILWRQLQEQEKA 542 (546)
T ss_pred -------CCHHHHHHHHH-HhcccCCCCcEEEEecCCC------CCCccceeHHHHHHHHhh
Confidence 01356667775 7899999999999999999 999999999999876544
No 41
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=5.7e-69 Score=707.88 Aligned_cols=531 Identities=17% Similarity=0.198 Sum_probs=437.5
Q ss_pred chHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHH
Q 005406 3 DSSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLH 82 (698)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~ 82 (698)
+..|+++|.++|.+++++|+.+++++++..+.... + +-..... ...+.+...+++
T Consensus 3044 ~~~~~~~~~~~l~~~~~~p~~~~~~l~~l~~~~~~-----~--------------~~~~~~~------~~~~~~~~~~~~ 3098 (3956)
T PRK12467 3044 IERLAESFDRLLQAMLNNPAARLGELPTLAAHERR-----Q--------------VLHAWNA------TAAAYPSERLVH 3098 (3956)
T ss_pred HHHHHHHHHHHHHHHHhCcCCchhhccCCCHHHHH-----H--------------HHHhhcc------CCCCCCccccHH
Confidence 46789999999999999999999999988655310 0 0000000 001123347899
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcC
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYS 162 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G 162 (698)
++|+++++++||++|+++. + +.+||+||+++++++|++|.+.|+++|++|+|+++|++++++++|||+++|
T Consensus 3099 ~l~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aG 3169 (3956)
T PRK12467 3099 QLIEAQVARTPEAPALVFG---D------QQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAG 3169 (3956)
T ss_pred HHHHHHHHhCCCcceEeeC---C------cccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhC
Confidence 9999999999999999764 2 359999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhc
Q 005406 163 YISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQ 242 (698)
Q Consensus 163 ~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (698)
+++|||+|.++.+++.+++++++++++|++......+.. .... .++.++.. ...
T Consensus 3170 a~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~----~~~~-~~~~~~~~---------------------~~~ 3223 (3956)
T PRK12467 3170 GAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPA----PAGD-TALTLDRL---------------------DLN 3223 (3956)
T ss_pred cEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhccc----ccCC-ceeeecch---------------------hhc
Confidence 999999999999999999999999999998765433211 0111 12222211 000
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhC
Q 005406 243 GCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYG 322 (698)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G 322 (698)
......+.....+++++||+|||||||.||||+++|+++.+.+.+....++++++|++++++|++|+.+....+.+|+.|
T Consensus 3224 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G 3303 (3956)
T PRK12467 3224 GYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWTLICG 3303 (3956)
T ss_pred ccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHHHhCC
Confidence 11111222345789999999999999999999999999999999888889999999999999999999998899999999
Q ss_pred cEEEEeC---CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHH
Q 005406 323 VAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (698)
Q Consensus 323 ~~~~~~~---~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (698)
+++++.+ .++..+++.|+++++|++.++|+++..+.+...
T Consensus 3304 ~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~------------------------------------- 3346 (3956)
T PRK12467 3304 GCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG------------------------------------- 3346 (3956)
T ss_pred CEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc-------------------------------------
Confidence 9999987 578999999999999999999999988865210
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCC-----CCCCCccCCCCCcE
Q 005406 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD-----NLSGHVGSPNPACE 473 (698)
Q Consensus 400 ~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~-----~~~~~vG~p~~~~~ 473 (698)
....++||.+++|||++++++.+.|.+.+ ++.++|+||+||+++.++...... ....++|+|++|++
T Consensus 3347 -------~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 3419 (3956)
T PRK12467 3347 -------GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRS 3419 (3956)
T ss_pred -------ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCE
Confidence 00115799999999999999999998776 678999999999988766443221 23368999999999
Q ss_pred EEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCC-------ceecCcEEEEecCCcEEEEccCCC
Q 005406 474 IKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDG-------WLHTGDIGLWLPGGRLKIIDRKKN 546 (698)
Q Consensus 474 v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~g-------w~~TGDlg~~~~~G~l~i~GR~~d 546 (698)
++|+| ++++.++.|. .|||+|+|+++++||+|+|+.|+++|..++ ||+|||+|++++||.|+|+||+|+
T Consensus 3420 ~~v~d-~~~~~vp~G~---~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~ 3495 (3956)
T PRK12467 3420 IYVLD-GQLNPVPVGV---AGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDH 3495 (3956)
T ss_pred EEEEC-CCCCCCCCCC---CceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccc
Confidence 99998 5567666665 899999999999999999999999996544 699999999999999999999999
Q ss_pred eEecCCceeecchHHHHHHhcCcCceeEEEEEcC--CCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHH
Q 005406 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS--FNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVL 624 (698)
Q Consensus 547 ~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~--~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 624 (698)
+||+ +|++|+|.|||++|.++|+|.+|+|++.. .++.++|+|++.... ....
T Consensus 3496 ~iki-~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~~~~~~lva~v~~~~~~-------------------------~~~~ 3549 (3956)
T PRK12467 3496 QVKI-RGFRIELGEIEARLLQHPSVREAVVLARDGAGGKQLVAYVVPADPQ-------------------------GDWR 3549 (3956)
T ss_pred eEee-ceEeecHHHHHHHHhhCcccceEEEEEecCCCCcEEEEEEeCCCCC-------------------------cccH
Confidence 9998 89999999999999999999999999743 357899999987631 0124
Q ss_pred HHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHH
Q 005406 625 AEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERF 674 (698)
Q Consensus 625 ~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~ 674 (698)
+++++.++ .+||.|++|..|++++++| +|++||++|++|.+.+
T Consensus 3550 ~~l~~~l~-~~Lp~y~vP~~~~~l~~lP------~t~~GKidR~~L~~~~ 3592 (3956)
T PRK12467 3550 ETLRDHLA-ASLPDYMVPAQLLVLAAMP------LGPNGKVDRKALPDPD 3592 (3956)
T ss_pred HHHHHHHh-ccCChhhCCCeeeeeccCC------CCCCCccchhhcCCCC
Confidence 56666775 7899999999999999999 9999999999998754
No 42
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-67 Score=596.09 Aligned_cols=518 Identities=22% Similarity=0.308 Sum_probs=420.8
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
..|+.++|+..+..+|++.|+.+. + .+.+.+||+||.+++.++|++|.+ .|+++|++|+++++|+++++++++
T Consensus 9 ~~~~~~~l~~~a~~~~~~~a~~~~----~--~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~l 82 (576)
T PRK05620 9 PLSLTRILEYGSTVHGDTTVTTWG----G--AEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLF 82 (576)
T ss_pred CCcHHHHHHHHHHhCCCceEEEEc----C--CceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 468999999999999999998753 1 235789999999999999999986 799999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|++++++.+++.++++.++++++|++......+.+....++..+.++..+................+.+|
T Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 162 (576)
T PRK05620 83 AVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSY 162 (576)
T ss_pred HHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccH
Confidence 99999999999999999999999999999999999988777777666667777767666543211111111123345678
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhc--ccccccCCCcEEEEcCChhhHHHHHH
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGF--SLMVQFYPSDIYMSYLPLAHIYERAN 314 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~--~~~~~~~~~d~~l~~~pl~h~~~~~~ 314 (698)
+++.+.... ........++++++++|||||||.||||+++|+++....... ...+++..+|++++.+|++|.+++..
T Consensus 163 ~~l~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 241 (576)
T PRK05620 163 EALLDGRST-VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGV 241 (576)
T ss_pred HHHhhcCCC-cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHH
Confidence 888764322 222234567999999999999999999999999986554432 23467888999999999999999988
Q ss_pred HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005406 315 QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (698)
Q Consensus 315 ~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (698)
.+.++..|+++++.. .++..+++.++++++|+++++|++|..+........
T Consensus 242 ~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--------------------------- 294 (576)
T PRK05620 242 PLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP--------------------------- 294 (576)
T ss_pred HHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC---------------------------
Confidence 888999999998875 689999999999999999999999988765321000
Q ss_pred CchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC--------CCCCC
Q 005406 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD--------NLSGH 464 (698)
Q Consensus 393 ~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~--------~~~~~ 464 (698)
....++|.+++||+++++.+.+.|...+|+++++.||+||++..++...+.+ ....+
T Consensus 295 ---------------~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (576)
T PRK05620 295 ---------------PERMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVS 359 (576)
T ss_pred ---------------cccCceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCCccccccccccccc
Confidence 0003799999999999999999999888999999999999987665443321 11347
Q ss_pred ccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhh----------------cccccCCCceecCc
Q 005406 465 VGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQT----------------REVIDGDGWLHTGD 528 (698)
Q Consensus 465 vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t----------------~~~f~~~gw~~TGD 528 (698)
+|++.++++++++|. +..... .++..|||+++|++++.|||++++.| .++|..+|||+|||
T Consensus 360 ~G~~~~~~~~~i~~~--g~~~~~-~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD 436 (576)
T PRK05620 360 QGRFPASLEYRIVND--GQVMES-TDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGD 436 (576)
T ss_pred cCCcCCceeEEEecC--CccccC-CCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCc
Confidence 899999999999984 333221 12247999999999999999999988 33455689999999
Q ss_pred EEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCC
Q 005406 529 IGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGI 605 (698)
Q Consensus 529 lg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~ 605 (698)
+|++++||.++|+||.||+||. +|++|+|.+||+++.+||.|.+|+|++.++ ++.+++++++.++.. .
T Consensus 437 ~~~~~~dg~l~~~GR~~d~i~~-~G~~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~--------~ 507 (576)
T PRK05620 437 VGSVTRDGFLTIHDRARDVIRS-GGEWIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIE--------P 507 (576)
T ss_pred eEEEcCCceEEEEechhhhhhc-CCEEEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCC--------c
Confidence 9999999999999999999995 899999999999999999999999999654 457888888765320 0
Q ss_pred CcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 606 KFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 606 ~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
+ +...++|+++++ .+|+.|++|+.|++++++| +|++||++|++|++++++.
T Consensus 508 ----------~----~~~~~~l~~~l~-~~L~~~~~P~~i~~v~~~P------~t~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 508 ----------T----RETAERLRDQLR-DRLPNWMLPEYWTFVDEID------KTSVGKFDKKDLRQHLADG 558 (576)
T ss_pred ----------c----cccHHHHHHHHH-hhCccccCCeEEEEeccCC------CCCcccCcHHHHHHHHhcC
Confidence 0 012456667765 7899999999999999999 9999999999999998863
No 43
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-67 Score=603.59 Aligned_cols=503 Identities=20% Similarity=0.230 Sum_probs=389.7
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|+++++.+|+++|+.+....+...+.++++||+||+++++++|++|.+. +++||+|+|+++|+++|++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 457899999999999999999976411011123457899999999999999999987 8999999999999999999999
Q ss_pred HHHhcCCeEEec-CCCCC--HHHHHHHHhhccceEEEecccchHHHHhhhhcCCc--eeEEEEeCCCCCCCCCCCCCCCc
Q 005406 157 ACSAYSYISVPL-YDTLG--PDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPS--VHLIVVVGGKDEHLPSLPSTSGV 231 (698)
Q Consensus 157 A~~~~G~~~vpl-~~~~~--~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~ii~~~~~~~~~~~~~~~~~~ 231 (698)
||+++|++++|+ ++..+ .+++.+++++++++++|++.+....+.+.....+. ...++.++.....
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 167 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVPDE---------- 167 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccccccc----------
Confidence 999999999999 45554 68899999999999999988765555443333221 1123332211000
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHH
Q 005406 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYE 311 (698)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~ 311 (698)
. . . ........++++++|+|||||||.||||++||+++.+.+......+++.++|++++++|++|+++
T Consensus 168 --------~--~-~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g 235 (631)
T PRK07769 168 --------V--G-A-TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMG 235 (631)
T ss_pred --------c--c-c-ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchh
Confidence 0 0 0 01112346799999999999999999999999999988877777788889999999999999999
Q ss_pred HHHHHHHHHhCcEEEEeC---C--ChhhHHHHHhhhcC---cEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 005406 312 RANQIVSVYYGVAVGFYQ---G--DNLKLMDDLAVLKP---TIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSK 383 (698)
Q Consensus 312 ~~~~~~~l~~G~~~~~~~---~--~~~~l~~~i~~~~~---t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k 383 (698)
+...+.+++.|+++++.+ + ++..+++.++++++ +++.++|.++..+..... ...
T Consensus 236 l~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~--~~~---------------- 297 (631)
T PRK07769 236 LITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARG--LPK---------------- 297 (631)
T ss_pred hHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhc--cch----------------
Confidence 988888888899998875 2 88899999998886 789999998876653100 000
Q ss_pred HHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh---CC---ceecccCcchhcchhcccCC
Q 005406 384 KQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF---GC---QVMEGYGMTETSCIISAIDK 457 (698)
Q Consensus 384 ~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~---g~---~l~~~YG~TE~~~~~~~~~~ 457 (698)
.. . ..++ .+++|.+++||+++++++.+.|.+.| |+ .++++||+||++..++....
T Consensus 298 -----~~-~--~~~~-----------l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~ 358 (631)
T PRK07769 298 -----DG-E--PPLD-----------LSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPM 358 (631)
T ss_pred -----hc-c--cCcc-----------hhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCC
Confidence 00 0 0000 15899999999999999999998877 33 59999999999865554322
Q ss_pred CC---------------------------CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCC
Q 005406 458 GD---------------------------NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKN 510 (698)
Q Consensus 458 ~~---------------------------~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~ 510 (698)
.. ...+++|+|.++++++|+|.+++..++.++ .|||||+||+++.|||++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge---~GEl~v~gp~v~~GY~~~ 435 (631)
T PRK07769 359 DEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQ---IGEIWLHGNNIGTGYWGK 435 (631)
T ss_pred CCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCC---EEEEEecCCCccccccCC
Confidence 11 012479999999999999976666666555 899999999999999999
Q ss_pred hhhhccccc-----------------CCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhc-CcCce
Q 005406 511 EVQTREVID-----------------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAK-CKFVL 572 (698)
Q Consensus 511 ~~~t~~~f~-----------------~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~-~p~V~ 572 (698)
++.|++.|. .+|||+|||+|+++ ||+|+|+||.||+||+ +|++|+|.|||++|.+ ||.|.
T Consensus 436 ~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~-~G~~V~p~eIE~~l~~~~p~v~ 513 (631)
T PRK07769 436 PEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVII-DGRNHYPQDLEYTAQEATKALR 513 (631)
T ss_pred hhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEE-CCeeeCHHHHHHHHHhcccccc
Confidence 999999884 25899999999995 9999999999999997 8999999999999986 89999
Q ss_pred e--EEEEEcCC----------------------CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHH
Q 005406 573 Q--CFIYGDSF----------------------NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMN 628 (698)
Q Consensus 573 ~--~~V~g~~~----------------------~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 628 (698)
+ ++|++.++ ++.++|+|++.++... .-.++|.
T Consensus 514 ~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~------------------------~~~~~l~ 569 (631)
T PRK07769 514 TGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHK------------------------LDPQPIA 569 (631)
T ss_pred CCcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCcccc------------------------ccHHHHH
Confidence 8 88888554 4568888887653100 0123444
Q ss_pred HHHHhCCCCC-cc-eeeEEEEec--CCCCCCCCccCcccCCChHHHHHHHH
Q 005406 629 AVGKEGQLRG-FE-YAKAVTLMP--EPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 629 ~~~~~~~L~~-~~-~p~~i~~~~--~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
++++ .+|+. |+ .|+.+.+++ ++| +|++|||+|++|++.|.
T Consensus 570 ~~~~-~~l~~~~~~~p~~~~~v~~~~lP------~t~~GKi~r~~l~~~~~ 613 (631)
T PRK07769 570 DDIR-AAIAVRHGVTVRDVLLVPAGSIP------RTSSGKIARRACRAAYL 613 (631)
T ss_pred HHHH-HHHHHHcCCCccEEEEECCCccc------cCCCcHHHHHHHHHHHH
Confidence 4443 44553 55 478888886 699 99999999999998764
No 44
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-68 Score=612.36 Aligned_cols=477 Identities=20% Similarity=0.266 Sum_probs=391.2
Q ss_pred CCHHHHHHHHHHh--CCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 79 GTLHDNFIYAVEN--YPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 79 ~tl~~~l~~~a~~--~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
.|+.++|.+++.+ +||++|+... ..+||+||+++++++|++|.+.|+++|++|+|+++|+++|+++++
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~----------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 73 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA----------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLL 73 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec----------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3788999998886 7999999542 249999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|++|.++.+++.+++++++++++|++......+... . + ...
T Consensus 74 a~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-------~-~---------------------~~~ 124 (705)
T PRK06060 74 ACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS-------R-V---------------------AEA 124 (705)
T ss_pred HHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc-------c-c---------------------chh
Confidence 9999999999999999999999999999999999986543322110 0 0 001
Q ss_pred HHHHhcCC-CCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcc-cccccCCCcEEEEcCChhhHHHHHH
Q 005406 237 LQLQSQGC-SSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFS-LMVQFYPSDIYMSYLPLAHIYERAN 314 (698)
Q Consensus 237 ~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~-~~~~~~~~d~~l~~~pl~h~~~~~~ 314 (698)
.++..... ..+....+..+++++||+|||||||.||||+++|+++.+.+..+. ..+++.++|++++.+|++|.+++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 204 (705)
T PRK06060 125 AELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGN 204 (705)
T ss_pred hhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhH
Confidence 11111100 011112234678999999999999999999999999988776553 3577889999999999999998754
Q ss_pred -HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCC
Q 005406 315 -QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQ 391 (698)
Q Consensus 315 -~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~ 391 (698)
.+.+++.|+++++.+ .++..+...++++++|+++++|+++..+.+....
T Consensus 205 ~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~---------------------------- 256 (705)
T PRK06060 205 SVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP---------------------------- 256 (705)
T ss_pred HHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc----------------------------
Confidence 677899999999876 5788888999999999999999999888653110
Q ss_pred CCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCCCCCCCccCCCC
Q 005406 392 TPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNP 470 (698)
Q Consensus 392 ~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~ 470 (698)
...+++|.+++||+++++++.+.+.+.+ ++++++.||+||++.++..........+++|+|++
T Consensus 257 ----------------~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~iG~p~~ 320 (705)
T PRK06060 257 ----------------DSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDEWRLGTLGRVLP 320 (705)
T ss_pred ----------------ccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCCCCCcCcccccCC
Confidence 0014899999999999999999998888 58999999999998655444333445678999999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEec
Q 005406 471 ACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKL 550 (698)
Q Consensus 471 ~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikl 550 (698)
+++++|+| ++++.++.+. .|||||+|++++.|||++|+.+. ..+|||+|||+|++++||+++|+||+||+||+
T Consensus 321 ~~~v~i~d-~~g~~~~~g~---~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~ 393 (705)
T PRK06060 321 PYEIRVVA-PDGTTAGPGV---EGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVI 393 (705)
T ss_pred CcEEEEEC-CCCCCCCCCC---ceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEECCCceEEEecccCceEEE
Confidence 99999999 4455555554 89999999999999999998763 36899999999999999999999999999997
Q ss_pred CCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHH
Q 005406 551 AQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEM 627 (698)
Q Consensus 551 s~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 627 (698)
+|++|+|.|||+++.+||.|.+++|++.++ ++.++++|++.... .. + ....+++
T Consensus 394 -~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~--------~~----------~----~~~~~~i 450 (705)
T PRK06060 394 -GGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGA--------TI----------D----GSVMRDL 450 (705)
T ss_pred -CCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEecccc--------Cc----------C----hHHHHHH
Confidence 899999999999999999999999998653 36889999976531 00 1 1123456
Q ss_pred HHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 628 NAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 628 ~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
+++++ .+|+.|++|..|++++++| +|++||++|++|++.+.
T Consensus 451 ~~~l~-~~L~~~~~P~~i~~v~~iP------~t~~GKidr~~L~~~~~ 491 (705)
T PRK06060 451 HRGLL-NRLSAFKVPHRFAVVDRLP------RTPNGKLVRGALRKQSP 491 (705)
T ss_pred HHHHH-HhCCCCcCCcEEEEeecCC------CCcchhhHHHHHHhhcc
Confidence 66665 6899999999999999999 99999999999998774
No 45
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=9.7e-67 Score=585.37 Aligned_cols=507 Identities=20% Similarity=0.260 Sum_probs=412.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|++.++++||++|+... + +.+||+||.+++.++|.+|.+.|+++|++|+++++|+++|+++++
T Consensus 19 ~~~~l~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~l 89 (542)
T PRK06155 19 SERTLPAMLARQAERYPDRPLLVFG---G------TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFL 89 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeC---C------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 4578999999999999999999753 2 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|+++.++.+++.++++++++++++++.+....+.........++.++.++...... ....+ ..
T Consensus 90 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~ 162 (542)
T PRK06155 90 GCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVS----VPAGW---ST 162 (542)
T ss_pred HHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccc----ccccc---ch
Confidence 999999999999999999999999999999999999877666555443333445556555432100 00000 00
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHH
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQI 316 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 316 (698)
.++... ..........++++++|+|||||||.||||+++|+++.+........+++.+++++++.+|++|.+++...+
T Consensus 163 ~~~~~~--~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~ 240 (542)
T PRK06155 163 APLPPL--DAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFF 240 (542)
T ss_pred hhhccc--CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHH
Confidence 111111 111122334678999999999999999999999999988877777778899999999999999999998888
Q ss_pred HHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCch
Q 005406 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (698)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (698)
.+++.|+++++.+ +++..+++.|+++++|++.++|+++..+.+.....
T Consensus 241 ~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~------------------------------- 289 (542)
T PRK06155 241 QALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARE------------------------------- 289 (542)
T ss_pred HHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCcc-------------------------------
Confidence 9999999999877 68999999999999999999999988776521100
Q ss_pred hhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEE
Q 005406 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIK 475 (698)
Q Consensus 396 ~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ 475 (698)
....+++|.++.|| +++.+.+.+++.+++++++.||+||++.++.... .....+++|.|.++++++
T Consensus 290 -----------~~~~~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~-~~~~~~~vG~~~~~~~~~ 355 (542)
T PRK06155 290 -----------SDRAHRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTH-GSQRPGSMGRLAPGFEAR 355 (542)
T ss_pred -----------ccccCceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecccccCccccCCC-CCCCCCCcCccCCCceEE
Confidence 00114788887666 5788889998889999999999999987665432 345678899999999999
Q ss_pred EEecCCCCCCCCCCCCCccEEEEeCC---CccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCC
Q 005406 476 LVDVPEMNYTSEDQPHPRGEICVRGP---IVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQ 552 (698)
Q Consensus 476 i~d~~~~~~~~~~~~~~~GEl~v~g~---~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~ 552 (698)
|+| +++..++.+. .|||+++|+ +++.||+++++.|.+.| .+|||+|||+|++++||.++|+||.||+||+ +
T Consensus 356 i~d-~~~~~~~~g~---~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~-~ 429 (542)
T PRK06155 356 VVD-EHDQELPDGE---PGELLLRADEPFAFATGYFGMPEKTVEAW-RNLWFHTGDRVVRDADGWFRFVDRIKDAIRR-R 429 (542)
T ss_pred EEC-CCCCCCCCCC---ceEEEEecCCccccchhhcCCHHHHHHhh-cCCcEeccceEEEcCCceEEEEecCCCEEEe-C
Confidence 998 4556666554 899999998 69999999999999988 6899999999999999999999999999996 8
Q ss_pred ceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHH
Q 005406 553 GEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNA 629 (698)
Q Consensus 553 G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 629 (698)
|++|+|.+||+++.++|+|.+++|++.++ ++.+.++++++.+. ..+ ..++++
T Consensus 430 G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~--------~~~-----------------~~~~~~ 484 (542)
T PRK06155 430 GENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGT--------ALE-----------------PVALVR 484 (542)
T ss_pred CEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCC--------CCC-----------------HHHHHH
Confidence 99999999999999999999999998654 46778888876532 011 345566
Q ss_pred HHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHHhccc
Q 005406 630 VGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMYAELA 686 (698)
Q Consensus 630 ~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly~~~~ 686 (698)
+++ .+|+.|++|..|++++++| +|++||++|++|++.+- ..+.|++..
T Consensus 485 ~~~-~~l~~~~~P~~i~~~~~iP------~t~~GKi~r~~l~~~~~--~~~~~~~~~ 532 (542)
T PRK06155 485 HCE-PRLAYFAVPRYVEFVAALP------KTENGKVQKFVLREQGV--TADTWDREA 532 (542)
T ss_pred HHH-hhCcCccCCcEEEEeccCC------CCcccceeHHHHHhhcc--CCchhhhhh
Confidence 664 6899999999999999999 99999999999998762 233555443
No 46
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.4e-66 Score=584.82 Aligned_cols=498 Identities=21% Similarity=0.296 Sum_probs=405.8
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..|+.++|++.++.+|+++|+... +...+..+.+||+||++++.++|.+|++.|+++|++|+++++|+++|+++++|
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~---~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la 97 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAY---RDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLA 97 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEee---cccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 358999999999999999999753 11122356799999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccch-----HHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCce
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 232 (698)
|+++|++++|+++.++.+++.++++.+++++++++.... .........++..+.++..+....
T Consensus 98 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 165 (538)
T TIGR03208 98 CARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGD------------ 165 (538)
T ss_pred HHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCC------------
Confidence 999999999999999999999999999999999987542 222223334455556666543210
Q ss_pred EeeHHHHHhcCCCCC-------CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCC
Q 005406 233 LISYLQLQSQGCSSP-------QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLP 305 (698)
Q Consensus 233 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p 305 (698)
..++.++....... .......++++++|+|||||||.||||+++|+++.+.+......+++..+|++++++|
T Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p 244 (538)
T TIGR03208 166 -DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASP 244 (538)
T ss_pred -cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCC
Confidence 12333322111000 1112356799999999999999999999999999998887777788889999999999
Q ss_pred hhhHHHHHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 005406 306 LAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSK 383 (698)
Q Consensus 306 l~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k 383 (698)
++|.+++.. .+.+++.|+++++.+ .++..+++.++++++|++.++|.++..+........
T Consensus 245 l~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~------------------ 306 (538)
T TIGR03208 245 MAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESG------------------ 306 (538)
T ss_pred chhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccC------------------
Confidence 999998766 677899999998877 689999999999999999999999988765321000
Q ss_pred HHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC--CC
Q 005406 384 KQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD--NL 461 (698)
Q Consensus 384 ~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~--~~ 461 (698)
...+++|.+++||+++++++.+++.+.+|+++++.||+||++.+++...... ..
T Consensus 307 ------------------------~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 362 (538)
T TIGR03208 307 ------------------------APVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDALEKA 362 (538)
T ss_pred ------------------------CCCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccchhhc
Confidence 0014899999999999999999998888999999999999987665443222 22
Q ss_pred CCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEE
Q 005406 462 SGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKII 541 (698)
Q Consensus 462 ~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~ 541 (698)
..++|+|+++++++|+| +++...+.++ .|||+++|++++.||+++|+.|. ++.+|||+|||+|++|++|.++++
T Consensus 363 ~~~~G~~~~g~~v~i~~-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~--~~~~~~~~TGD~~~~~~~g~l~~~ 436 (538)
T TIGR03208 363 STTDGRPLPGVEVKVID-ANGAKLSQGE---TGRLLVRGCSNFGGYLKRPHLNS--TDAEGWFDTGDLAFQDAEGYIRIN 436 (538)
T ss_pred cCcccccCCCCEEEEEC-CCCCCCcCCC---CcEEEEecCcccccccCCccccc--ccCCCceeccceEEECCCCcEEEE
Confidence 45799999999999999 4555555554 89999999999999999998875 357899999999999999999999
Q ss_pred ccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHH
Q 005406 542 DRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPR 618 (698)
Q Consensus 542 GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (698)
||.||+||. +|++|+|.+||+++.+||+|.+++|++.++ ++.++++|++.++. ..+
T Consensus 437 gR~~~~i~~-~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~--------~~~------------ 495 (538)
T TIGR03208 437 GRSKDVIIR-GGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAVVVPKPGC--------TLD------------ 495 (538)
T ss_pred eccCceEEE-CCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEEEEECCCC--------CCC------------
Confidence 999999996 899999999999999999999999999654 36789999987631 111
Q ss_pred HHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHH
Q 005406 619 ARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAK 671 (698)
Q Consensus 619 ~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~ 671 (698)
.+++.+++++.+++.|++|+.|++++++| +|++||++|++|+
T Consensus 496 -----~~~l~~~~~~~~l~~~~~P~~i~~v~~iP------~t~~gKv~r~~L~ 537 (538)
T TIGR03208 496 -----FAAMVAFLKAQKVALQYIPERLEVVDALP------ATPAGKIQKFRLR 537 (538)
T ss_pred -----HHHHHHHHHhcchhhccCCcEEEEeccCC------CCCccccchHhhc
Confidence 23455555445799999999999999999 9999999999986
No 47
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.1e-67 Score=608.83 Aligned_cols=491 Identities=22% Similarity=0.269 Sum_probs=387.9
Q ss_pred CCCCHHHHHHHHHHhCCC-CCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPD-YKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd-~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~ 155 (698)
+..|++++|.++++++|+ ++|+... +++++||+||.++++++|++|.+. +++||+|+|+++|++||++++
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~--------~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~ 272 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDV--------NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVI 272 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcC--------CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHH
Confidence 467899999999999998 5777421 235699999999999999999987 599999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHH--hhhhcCCceeEEEEeCCCCCCCCCCCCCCCceE
Q 005406 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLL--SFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKL 233 (698)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 233 (698)
|||+++|++++|++++++.+++.+++++++++++|++.+...... .....++.+..+ .+++....
T Consensus 273 lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~------------ 339 (718)
T PRK08043 273 FGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWV-YLEDLKDD------------ 339 (718)
T ss_pred HHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEE-Ehhhhhhh------------
Confidence 999999999999999999999999999999999999876543211 111112222222 22211000
Q ss_pred eeHHHH--H-hcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHH
Q 005406 234 ISYLQL--Q-SQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIY 310 (698)
Q Consensus 234 ~~~~~~--~-~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 310 (698)
..+.+. . ..............++|+++|+|||||||.||||++||+++.+.+......++++++|++++.+|++|.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~ 419 (718)
T PRK08043 340 VTTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSF 419 (718)
T ss_pred cchhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhh
Confidence 011110 0 0000001111234679999999999999999999999999998887777778889999999999999999
Q ss_pred HHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHH
Q 005406 311 ERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAI 387 (698)
Q Consensus 311 ~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~ 387 (698)
++.. .+.+++.|+++++.+ .+...+.+.++++++|+++++|+++..+.+.. ..
T Consensus 420 g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~-----~~------------------- 475 (718)
T PRK08043 420 GLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA-----NP------------------- 475 (718)
T ss_pred hhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc-----Cc-------------------
Confidence 9876 678899999999886 46678889999999999999999887654310 00
Q ss_pred HcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccC
Q 005406 388 VSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGS 467 (698)
Q Consensus 388 ~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~ 467 (698)
++ .+++|.+++||+++++++.+.|++.+|++++++||+||++++++...+.....+++|+
T Consensus 476 ---------~~-----------~~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~ 535 (718)
T PRK08043 476 ---------YD-----------FARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGR 535 (718)
T ss_pred ---------cc-----------ccceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCcccCCCCCCC
Confidence 00 1589999999999999999999988999999999999998766655444456789999
Q ss_pred CCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccC--Chhh-------hcccccCCCceecCcEEEEecCCcE
Q 005406 468 PNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYK--NEVQ-------TREVIDGDGWLHTGDIGLWLPGGRL 538 (698)
Q Consensus 468 p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~--~~~~-------t~~~f~~~gw~~TGDlg~~~~~G~l 538 (698)
|+||++++|+|.++. + +.|||+++|++++.|||+ +++. +.+.+..+|||+|||+|++|+||++
T Consensus 536 p~pg~~~~i~d~~~~-----~---~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l 607 (718)
T PRK08043 536 ILPGMDARLLSVPGI-----E---QGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFV 607 (718)
T ss_pred cCCCCeeEEecCCCC-----C---CceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcE
Confidence 999999999984321 2 369999999999999998 4542 2333346899999999999999999
Q ss_pred EEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhC
Q 005406 539 KIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCN 615 (698)
Q Consensus 539 ~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (698)
+|+||+||+||+ +|++|+|.|||+++.+|+.+.+++|++.++ ++.++++++... .+
T Consensus 608 ~i~GR~~d~I~~-~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~~~~-----------~~--------- 666 (718)
T PRK08043 608 QIQGRAKRFAKI-AGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTTDSE-----------LT--------- 666 (718)
T ss_pred EEEecCCCeeEe-CcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEcCcc-----------cC---------
Confidence 999999999997 799999999999999999888888888543 456666654211 11
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 616 DPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 616 ~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.+++++++++..|+.|++|+.|++++++| +|++||++|++|++.+.+
T Consensus 667 --------~~~l~~~~~~~~l~~~~vP~~i~~v~~lP------~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 667 --------REKLQQYAREHGVPELAVPRDIRYLKQLP------LLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred --------HHHHHHHHHhcCCCcccCCceEEEecccC------cCCCCCcCHHHHHHHHhc
Confidence 34567777645599999999999999999 999999999999887643
No 48
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.3e-67 Score=586.96 Aligned_cols=506 Identities=22% Similarity=0.284 Sum_probs=399.6
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHH
Q 005406 75 HPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIV 154 (698)
Q Consensus 75 ~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~ 154 (698)
.+...|+.++|++.++++|+++|+.+. ++ .+.+||+||.++++++|++|.+.|+++|++|+|+++|+++|+++
T Consensus 12 ~~~~~~l~~~l~~~a~~~p~~~ai~~~---~~----~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~ 84 (534)
T PRK05852 12 SDFGPRIADLVEVAATRLPEAPALVVT---AD----RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVA 84 (534)
T ss_pred hhhcccHHHHHHHHHHhCCCCcEEEec---CC----CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHH
Confidence 446788999999999999999999764 22 24699999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEe
Q 005406 155 DHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLI 234 (698)
Q Consensus 155 ~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (698)
++||+++|++++|+++.++.+++.+++++++++++|++............. .....+.+...... ..+....
T Consensus 85 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~ 156 (534)
T PRK05852 85 LLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTR--WWPLTVNVGGDSGP------SGGTLSV 156 (534)
T ss_pred HHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccccc--ccceeeeecccccc------ccccccc
Confidence 999999999999999999999999999999999999986432211110000 00111111111000 0000000
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH
Q 005406 235 SYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN 314 (698)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 314 (698)
.+...... ..........++++++|+|||||||.||||+++|+++.+.+......+++..+|++++.+|++|.+++..
T Consensus 157 ~~~~~~~~--~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 234 (534)
T PRK05852 157 HLDAATEP--TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIA 234 (534)
T ss_pred ccccccCC--CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHH
Confidence 11110000 0001111123578899999999999999999999999988888777788899999999999999999887
Q ss_pred -HHHHHHhCcEEEEeC---CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005406 315 -QIVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (698)
Q Consensus 315 -~~~~l~~G~~~~~~~---~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (698)
.+.+++.|+++++.+ +++..+++.++++++|.++++|.++..+.+......
T Consensus 235 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~------------------------- 289 (534)
T PRK05852 235 ALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEP------------------------- 289 (534)
T ss_pred HHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccc-------------------------
Confidence 566788888888754 578899999999999999999999988876321100
Q ss_pred CCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-----C---CCC
Q 005406 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-----D---NLS 462 (698)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-----~---~~~ 462 (698)
.....+++|.+++||+++++.+.+++.+.++++++++||+||++..++..... . ...
T Consensus 290 ---------------~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~ 354 (534)
T PRK05852 290 ---------------SGRKPAALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVST 354 (534)
T ss_pred ---------------ccccCCCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCccccccccCccccc
Confidence 00011589999999999999999999999999999999999998766543321 1 123
Q ss_pred CCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEc
Q 005406 463 GHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIID 542 (698)
Q Consensus 463 ~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~G 542 (698)
+.+|. .++++++++| +++..++.++ .|||+++|+++++|||++++.|++.| .+|||+|||+|++|+||++++.|
T Consensus 355 g~~g~-~~g~~~~i~d-~~g~~~~~g~---~Gel~v~g~~v~~gY~~~~~~t~~~~-~~g~~~TGD~~~~d~dG~l~~~g 428 (534)
T PRK05852 355 GLVGR-STGAQIRIVG-SDGLPLPAGA---VGEVWLRGTTVVRGYLGDPTITAANF-TDGWLRTGDLGSLSAAGDLSIRG 428 (534)
T ss_pred ccCCC-CCCCeEEEEC-CCCCCCCCCC---ceEEEEecCcccchhcCCcccchhhh-cCCCcccCceEEEeCCCcEEEEe
Confidence 34444 7999999999 4556555554 89999999999999999999999998 68999999999999999999999
Q ss_pred cCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHH
Q 005406 543 RKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRA 619 (698)
Q Consensus 543 R~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (698)
|.||+||. +|.+|+|.+||+++.++|+|.+|+|+|.++ ++.++++|++++.. +.+
T Consensus 429 R~~d~i~~-~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~--------~~~------------- 486 (534)
T PRK05852 429 RIKELINR-GGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESA--------PPT------------- 486 (534)
T ss_pred cchhhEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCC--------CCC-------------
Confidence 99999996 899999999999999999999999999764 46788898876531 011
Q ss_pred HHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 620 RAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 620 ~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.++|.++++ .+|+.|++|+.|++++++| +|++||++|++|++.|.+
T Consensus 487 ----~~~i~~~~~-~~l~~~~~P~~i~~v~~iP------~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 487 ----AEELVQFCR-ERLAAFEIPASFQEASGLP------HTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred ----HHHHHHHHH-HhcccccCCeEEEEhhhcC------CCCCccccHHHHHHHhcc
Confidence 345666665 6799999999999999999 999999999999998853
No 49
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.2e-66 Score=576.04 Aligned_cols=476 Identities=26% Similarity=0.342 Sum_probs=400.8
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
++|+++.|++.+.++||++|+.+. + +.+||+||+++++++|++|.+.|+++|++|+++++|+++|++++||
T Consensus 1 ~~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (483)
T PRK03640 1 METMPNWLKQRAFLTPDRTAIEFE---E------KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHA 71 (483)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC---C------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 368999999999999999999753 2 5699999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHH
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (698)
|+++|++++|+++.++.+++.++++++++++++++........... ...++
T Consensus 72 ~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~-----------------------------~~~~~ 122 (483)
T PRK03640 72 LQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI-----------------------------SVKFA 122 (483)
T ss_pred HHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc-----------------------------cccHH
Confidence 9999999999999999999999999999999999876443322110 01133
Q ss_pred HHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHH
Q 005406 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIV 317 (698)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~ 317 (698)
++...............++++++++|||||||.||+|++||.++...+......++++++|++++.+|++|++++...+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~ 202 (483)
T PRK03640 123 ELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMR 202 (483)
T ss_pred HHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHH
Confidence 33332211112223346789999999999999999999999999887776666688899999999999999999988888
Q ss_pred HHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchh
Q 005406 318 SVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKM 396 (698)
Q Consensus 318 ~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~ 396 (698)
++..|+++++.+ .++..+++.++++++|++.++|+++..+.+.....
T Consensus 203 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-------------------------------- 250 (483)
T PRK03640 203 SVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-------------------------------- 250 (483)
T ss_pred HHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc--------------------------------
Confidence 999999999988 68999999999999999999999999887531100
Q ss_pred hHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC--CCCCCCccCCCCCcEE
Q 005406 397 WDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG--DNLSGHVGSPNPACEI 474 (698)
Q Consensus 397 ~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~~v 474 (698)
....++|.+++||+++++.+.+.++. +++++++.||+||++..+...... ....+++|+|++++++
T Consensus 251 -----------~~~~~lr~~~~~g~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~ 318 (483)
T PRK03640 251 -----------TYPSSFRCMLLGGGPAPKPLLEQCKE-KGIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCEL 318 (483)
T ss_pred -----------ccCCcceEEEEcCCCCCHHHHHHHHH-hCCCeeeeeccCcccccccccCcccccccCCCcccccCCcEE
Confidence 01148999999999999999998887 599999999999987654433332 2456899999999999
Q ss_pred EEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCce
Q 005406 475 KLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGE 554 (698)
Q Consensus 475 ~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~ 554 (698)
+|.+. + ..++.+. .|||+++|++++.||+++++.+...| .+|||+|||+|++++||.++++||+||++|+ +|+
T Consensus 319 ~i~~~-~-~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~-~G~ 391 (483)
T PRK03640 319 KIEKD-G-VVVPPFE---EGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDEEGFLYVLDRRSDLIIS-GGE 391 (483)
T ss_pred EEecC-C-CcCCCCC---ceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcCCCCEEEeecccCeEEe-CCE
Confidence 99983 2 4444444 89999999999999999999999998 6899999999999999999999999999996 899
Q ss_pred eecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHH
Q 005406 555 YVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVG 631 (698)
Q Consensus 555 ~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~ 631 (698)
+|+|.+||+++.++|+|.+++|++.++ +..++++++++.. .+ .+++++++
T Consensus 392 ~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~----------~~-----------------~~~l~~~~ 444 (483)
T PRK03640 392 NIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKSGE----------VT-----------------EEELRHFC 444 (483)
T ss_pred EECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeCCC----------CC-----------------HHHHHHHH
Confidence 999999999999999999999998654 3567787776542 11 34455666
Q ss_pred HhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 632 KEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 632 ~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
+ ..|+.|++|+.|++++++| +|++||++|++|++.+++
T Consensus 445 ~-~~l~~~~~p~~i~~~~~iP------~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 445 E-EKLAKYKVPKRFYFVEELP------RNASGKLLRHELKQLVEE 482 (483)
T ss_pred H-HhccCCCCCcEEEEeCCCC------CCCccceeHHHHHHHHhh
Confidence 4 6799999999999999999 999999999999999874
No 50
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-66 Score=579.62 Aligned_cols=501 Identities=25% Similarity=0.411 Sum_probs=423.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
+..++.+.|++.++.+|+++|+.+. + +.+||+||++++.++|..|.+.|+++|++|+++++|+++++++++
T Consensus 3 ~~~~i~~~l~~~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~l 73 (513)
T PRK07656 3 EWMTLPELLARAARRFGDKEAYVFG---D------QRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAAL 73 (513)
T ss_pred ccccHHHHHHHHHHHCCCCeEEEeC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 4578999999999999999999763 2 459999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|+++.++.+.+.++++++++++++++.............++.++.++......... ......+|
T Consensus 74 a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 147 (513)
T PRK07656 74 GALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDP------HTEKMKTF 147 (513)
T ss_pred HHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCccccc------CccccccH
Confidence 999999999999999999999999999999999999887666655555566666666654432211 01123567
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-H
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-Q 315 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~ 315 (698)
+++...... ........++++++|+|||||||.||+|.++|+++.+.+......+++.++|++++.+|++|.+++.. .
T Consensus 148 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (513)
T PRK07656 148 TDFLAAGDP-AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGV 226 (513)
T ss_pred HHHHhcCCC-CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHH
Confidence 777654332 12334467899999999999999999999999999988887777788999999999999999999876 6
Q ss_pred HHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCc
Q 005406 316 IVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPS 394 (698)
Q Consensus 316 ~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~ 394 (698)
+.+++.|+++++.+ .++..+++.++++++|++.++|+++..+.+.....
T Consensus 227 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~------------------------------ 276 (513)
T PRK07656 227 NAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRS------------------------------ 276 (513)
T ss_pred HHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcC------------------------------
Confidence 77899999998876 68999999999999999999999999887631100
Q ss_pred hhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCC-ceecccCcchhcchhcccCCCC-C--CCCCccCCCC
Q 005406 395 KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGD-N--LSGHVGSPNP 470 (698)
Q Consensus 395 ~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~~~~-~--~~~~vG~p~~ 470 (698)
.....++|.+++||+++++++.+.+.+.+++ .+++.||+||++++++.+.... . ..+++|.|++
T Consensus 277 ------------~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~ 344 (513)
T PRK07656 277 ------------AEDLSSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIA 344 (513)
T ss_pred ------------CCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCC
Confidence 0011589999999999999999999998998 8999999999987776655433 2 2678999999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEec
Q 005406 471 ACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKL 550 (698)
Q Consensus 471 ~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikl 550 (698)
+++++|+| +++..++.+. .|||+++|+.++.||+++++.+...|..+|||+|||+|+++++|.++++||.||+||+
T Consensus 345 ~~~~~i~d-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~ 420 (513)
T PRK07656 345 GVENKIVN-ELGEEVPVGE---VGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIV 420 (513)
T ss_pred CcEEEEEC-CCCCCCCCCC---ceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEe
Confidence 99999999 5566666555 8999999999999999999999999977999999999999999999999999999997
Q ss_pred CCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHH
Q 005406 551 AQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEM 627 (698)
Q Consensus 551 s~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 627 (698)
+|.+|+|.+||+++.++|+|.+++|++.++ ++.++++|++++.. +.+ .+++
T Consensus 421 -~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~--------~~~-----------------~~~l 474 (513)
T PRK07656 421 -GGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGA--------ELT-----------------EEEL 474 (513)
T ss_pred -CCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCC--------CCC-----------------HHHH
Confidence 899999999999999999999999998543 46788999876421 111 2455
Q ss_pred HHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHH
Q 005406 628 NAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKE 672 (698)
Q Consensus 628 ~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~ 672 (698)
.++++ ..|+.+++|..+++++++| +|++||++|++|++
T Consensus 475 ~~~~~-~~l~~~~~p~~i~~v~~iP------~t~~gK~~r~~l~~ 512 (513)
T PRK07656 475 IAYCR-EHLAKYKVPRSIEFLDELP------KNATGKVLKRALRE 512 (513)
T ss_pred HHHHH-hhcccccCCCEEEEecCCC------CCCccceeHHHHhc
Confidence 66664 6899999999999999999 99999999999875
No 51
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7.1e-68 Score=697.57 Aligned_cols=550 Identities=19% Similarity=0.209 Sum_probs=441.5
Q ss_pred chHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHH
Q 005406 3 DSSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLH 82 (698)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~ 82 (698)
+..|+++|.++|.+++++|+.+++++++..+... . .+....... ..+.+...+++
T Consensus 1523 i~~l~~~~~~lL~~l~~~p~~~~~~l~~~~~~~~------~-------------~~~~~~~~~------~~~~~~~~~~~ 1577 (3956)
T PRK12467 1523 IERLAGHWLNLLQGLVADPERRLGELDLLDEAER------R-------------QILEGWNAT------HTGYPLARLVH 1577 (3956)
T ss_pred HHHHHHHHHHHHHHHhhCccCceeeccccchHHh------h-------------hhHHhhcCC------ccCCCccccHH
Confidence 4578999999999999999999999998765421 0 000000000 01123346899
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcC
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYS 162 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G 162 (698)
++|++.++++|+++|+.+. + +.+||+||+++++++|++|.+.|+++|++|+|+++|++++++++|||+++|
T Consensus 1578 ~~~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG 1648 (3956)
T PRK12467 1578 QLIEDQAAATPEAVALVFG---E------QELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAG 1648 (3956)
T ss_pred HHHHHHHHhCCCCeEEEeC---C------cEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccC
Confidence 9999999999999999764 2 459999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhc
Q 005406 163 YISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQ 242 (698)
Q Consensus 163 ~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (698)
++++||+|.++.+++.++++++++++++++......+. ...... ++.++... ++...
T Consensus 1649 ~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~----~~~~~~-~~~~~~~~------------------~~~~~ 1705 (3956)
T PRK12467 1649 GAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLP----LPDGLR-SLVLDQED------------------DWLEG 1705 (3956)
T ss_pred ceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCc----cccCCc-EEEecccc------------------chhcc
Confidence 99999999999999999999999999999876433221 111112 22222111 00000
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhC
Q 005406 243 GCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYG 322 (698)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G 322 (698)
. ....+.....+++++||+|||||||.||||+++|+++++.+.+....++++++|+++++.|++|+++++.++.+++.|
T Consensus 1706 ~-~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G 1784 (3956)
T PRK12467 1706 Y-SDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSFAFDVSVWELFWPLING 1784 (3956)
T ss_pred C-CCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHHHHHHHHHhCC
Confidence 0 111222345789999999999999999999999999999998888888999999999999999999998899999999
Q ss_pred cEEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhH
Q 005406 323 VAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWD 398 (698)
Q Consensus 323 ~~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d 398 (698)
+++++.+ .++..+++.|+++++|++.++|+++..|......
T Consensus 1785 ~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~----------------------------------- 1829 (3956)
T PRK12467 1785 ARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQ----------------------------------- 1829 (3956)
T ss_pred CEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhccc-----------------------------------
Confidence 9999986 4789999999999999999999999988752000
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCC-----CCCCCCccCCCCCc
Q 005406 399 RLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG-----DNLSGHVGSPNPAC 472 (698)
Q Consensus 399 ~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~-----~~~~~~vG~p~~~~ 472 (698)
....+++|.+++|||++++++.+.|.+.+ ++.++|.||+||+++.++..... .....++|+|++++
T Consensus 1830 --------~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~ 1901 (3956)
T PRK12467 1830 --------VEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANL 1901 (3956)
T ss_pred --------cccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCC
Confidence 00014899999999999999999888766 57899999999999776654322 12356899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhccccc-------CCCceecCcEEEEecCCcEEEEccCC
Q 005406 473 EIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID-------GDGWLHTGDIGLWLPGGRLKIIDRKK 545 (698)
Q Consensus 473 ~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~-------~~gw~~TGDlg~~~~~G~l~i~GR~~ 545 (698)
+++|+| ++++.++.|. .|||+|+|+++++||+++|+.|+++|. +++||+|||+|++++||.|+|+||+|
T Consensus 1902 ~~~vld-~~~~~vp~G~---~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D 1977 (3956)
T PRK12467 1902 STYILD-ASLNPVPIGV---AGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRID 1977 (3956)
T ss_pred EEEEEC-CCCCCCCCCC---ceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccC
Confidence 999998 5667666665 899999999999999999999999983 34699999999999999999999999
Q ss_pred CeEecCCceeecchHHHHHHhcCcCceeEEEEEcC--CCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHH
Q 005406 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS--FNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAV 623 (698)
Q Consensus 546 d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~--~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 623 (698)
|+||+ +|++|+|.|||++|.++|+|.+|+|++.+ .++.++|+|++...... . ..+.....
T Consensus 1978 ~qVki-~G~rIel~eIE~~l~~~p~V~~a~vv~~~~~~~~~lva~vv~~~~~~~--------~---------~~~~~~~~ 2039 (3956)
T PRK12467 1978 HQVKI-RGFRIELGEIEARLREQGGVREAVVIAQDGANGKQLVAYVVPTDPGLV--------D---------DDEAQVAL 2039 (3956)
T ss_pred ceEEe-CeEEechHHHHHHHHhCCCcceEEEEEecCCCCcEEEEEEEecCcccc--------c---------cccccccc
Confidence 99998 89999999999999999999999999854 35789999998653210 0 00011123
Q ss_pred HHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHH
Q 005406 624 LAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMY 682 (698)
Q Consensus 624 ~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly 682 (698)
.++|+++++ ..||.|++|..|++++++| +|++||++|++|.+.+...+.+.|
T Consensus 2040 ~~~l~~~l~-~~Lp~ymvP~~~~~l~~lP------~t~~GKidr~~L~~~~~~~~~~~~ 2091 (3956)
T PRK12467 2040 RAILKNHLK-ASLPEYMVPAHLVFLARMP------LTPNGKLDRKALPAPDASELQQAY 2091 (3956)
T ss_pred HHHHHHHHH-hhCchhhCchhhhhhhcCC------CCCCCCcchhhCCCCccccccccc
Confidence 456777775 7899999999999999999 999999999999876544433333
No 52
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.4e-66 Score=584.47 Aligned_cols=513 Identities=25% Similarity=0.333 Sum_probs=412.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..|+.++|+++++++|+++|+.+. + +.+||.||+++++++|++|.+.|+++||+|+++++|+++|+++++|
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~---~------~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA 101 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFF---G------ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYA 101 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHH
Confidence 348999999999999999999764 2 3499999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCC--------------
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLP-------------- 223 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-------------- 223 (698)
|+++|++++|+++.++.+++.+++++++++++|+++.....+.+..... ..+.++.++.......
T Consensus 102 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (573)
T PRK05605 102 VLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTT-PLETIVSVNMIAAMPLLQRLALRLPIPALR 180 (573)
T ss_pred HHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhcc-ccceeEeeeccccccccccccccccccccc
Confidence 9999999999999999999999999999999999887655554433222 2333433321110000
Q ss_pred ---CCCCCCCceEeeHHHHHhcCCCC---CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccc-c-C
Q 005406 224 ---SLPSTSGVKLISYLQLQSQGCSS---PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ-F-Y 295 (698)
Q Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~-~ 295 (698)
...........+|.++....... ........++++++++|||||||.||+|++||+++...+......+. + .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 260 (573)
T PRK05605 181 KARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGD 260 (573)
T ss_pred ccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCC
Confidence 00000111335677665432211 01223356799999999999999999999999999877654433222 2 3
Q ss_pred CCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHH
Q 005406 296 PSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLRE 373 (698)
Q Consensus 296 ~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 373 (698)
.++++++.+|++|.+++.. .+.+++.|+++++.+ .++..+++.++++++|++.++|+++..+.+......
T Consensus 261 ~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~-------- 332 (573)
T PRK05605 261 GPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERG-------- 332 (573)
T ss_pred CCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccC--------
Confidence 4789999999999999876 456788999998877 799999999999999999999999998876321100
Q ss_pred HHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhc
Q 005406 374 KLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIIS 453 (698)
Q Consensus 374 ~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~ 453 (698)
...+++|.+++||+++++++.+.+.+.+++++++.||+||+++++.
T Consensus 333 ----------------------------------~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~ 378 (573)
T PRK05605 333 ----------------------------------VDLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIV 378 (573)
T ss_pred ----------------------------------CCchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhh
Confidence 0014799999999999999999999888999999999999987766
Q ss_pred ccCCCC-CCCCCccCCCCCcEEEEEecCC-CCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEE
Q 005406 454 AIDKGD-NLSGHVGSPNPACEIKLVDVPE-MNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGL 531 (698)
Q Consensus 454 ~~~~~~-~~~~~vG~p~~~~~v~i~d~~~-~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~ 531 (698)
...... ..++++|.|+++++++|+|.++ +..++.+. .|||+++|+.++.||+++++.|.+.| .+|||+|||+|+
T Consensus 379 ~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~ 454 (573)
T PRK05605 379 GNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGE---EGELLVRGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVV 454 (573)
T ss_pred cCCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCC---eeEEEEecCchhhhhcCChhHhhhcc-cCCCcccCCEEE
Confidence 544332 4567999999999999999655 34444444 89999999999999999999999998 568999999999
Q ss_pred EecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcc
Q 005406 532 WLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFE 608 (698)
Q Consensus 532 ~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~ 608 (698)
+|++|+++++||.||+||. +|++|+|.+||+++.+++.|.+++|+|.++ ++.++++|+++++. ..+
T Consensus 455 ~~~~g~l~i~gR~dd~i~~-~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~--------~~~-- 523 (573)
T PRK05605 455 MEEDGFIRIVDRIKELIIT-GGFNVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGA--------ALD-- 523 (573)
T ss_pred EcCCCcEEEEeccccceee-CCEEECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCC--------CCC--
Confidence 9999999999999999996 899999999999999999999999998543 47888888887631 011
Q ss_pred cHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHH
Q 005406 609 DLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAIS 679 (698)
Q Consensus 609 ~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~ 679 (698)
.++|+++++ ..|+.|++|..|++++++| +|.+||++|++|++++.+++.
T Consensus 524 ---------------~~~l~~~~~-~~l~~~~~p~~i~~~~~iP------~t~~GKi~r~~L~~~~~~~~~ 572 (573)
T PRK05605 524 ---------------PEGLRAYCR-EHLTRYKVPRRFYHVDELP------RDQLGKVRRREVREELLEKLG 572 (573)
T ss_pred ---------------HHHHHHHHH-HhCccccCCcEEEEeccCC------CCCcccccHHHHHHHHHHHhc
Confidence 245566664 6789999999999999999 999999999999999877653
No 53
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2e-66 Score=584.30 Aligned_cols=517 Identities=24% Similarity=0.318 Sum_probs=413.2
Q ss_pred cCcccccCCCCccccccCCCCCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCC
Q 005406 55 KWNVYRSARSPLTLVDRFPDHPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHG 134 (698)
Q Consensus 55 ~~~~~r~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g 134 (698)
...+||+..... +.+...|+.++|.+.++++|+++|+.+. .+ .+.+||+||.+++.++|++|.+.|
T Consensus 11 ~~~~~~~~~~~~-------~~~~~~~~~~~l~~~a~~~p~~~a~~~~---~~----~~~~Ty~~l~~~~~~la~~L~~~g 76 (546)
T PLN02330 11 NEHIFRSRYPSV-------PVPDKLTLPDFVLQDAELYADKVAFVEA---VT----GKAVTYGEVVRDTRRFAKALRSLG 76 (546)
T ss_pred cceeeccCCCCC-------CCCCCCcHHHHHhhhhhcCCCccEEEec---CC----CCcccHHHHHHHHHHHHHHHHHhC
Confidence 345677664443 1235688999999999999999999653 11 146999999999999999999999
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEE
Q 005406 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVV 214 (698)
Q Consensus 135 v~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 214 (698)
+++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++++++......+.... .. ++.
T Consensus 77 ~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~-----~~-~i~ 150 (546)
T PLN02330 77 LRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLG-----LP-VIV 150 (546)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcC-----Cc-EEE
Confidence 999999999999999999999999999999999999999999999999999999999987665553321 12 333
Q ss_pred eCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCC--CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccccc
Q 005406 215 VGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSP--QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMV 292 (698)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~ 292 (698)
++... ......|.+++....... .......++++++|+|||||||.||||+++|+++...+.......
T Consensus 151 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~ 220 (546)
T PLN02330 151 LGEEK----------IEGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSV 220 (546)
T ss_pred ecCCC----------CCCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhcc
Confidence 33211 011245666664432211 112334578999999999999999999999999987665322111
Q ss_pred --ccCCCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhc
Q 005406 293 --QFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKAS 368 (698)
Q Consensus 293 --~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 368 (698)
.....++++.++|++|.+++.. .+.++..|+++++.+ +++..+++.++++++|++.++|+++..+....... .
T Consensus 221 ~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~--~- 297 (546)
T PLN02330 221 GPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVE--E- 297 (546)
T ss_pred CccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCcccc--c-
Confidence 1224568999999999999875 567889999998877 79999999999999999999999998876521000 0
Q ss_pred chHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcch
Q 005406 369 GTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTE 447 (698)
Q Consensus 369 ~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE 447 (698)
++ +. ..++|.+++||+++++++.+++.+.+ ++++++.||+||
T Consensus 298 ----------------------------~~---~~------~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE 340 (546)
T PLN02330 298 ----------------------------FD---LS------KLKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTE 340 (546)
T ss_pred ----------------------------cc---cc------hheeeeEEEcCCcCCHHHHHHHHHHcCCCeEEecccccc
Confidence 00 00 01589999999999999999999988 899999999999
Q ss_pred hcchhcccC-CC----CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCC
Q 005406 448 TSCIISAID-KG----DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDG 522 (698)
Q Consensus 448 ~~~~~~~~~-~~----~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~g 522 (698)
++.+..... +. ....+++|.|+++++++|+|++++..++.++ .|||+++|++++.||+++++.+.+.|+.+|
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g 417 (546)
T PLN02330 341 HSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNT---PGELCVRSQCVMQGYYNNKEETDRTIDEDG 417 (546)
T ss_pred cccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCC---ceEEEEecchhhhhhccCccchhhhccCCC
Confidence 976543221 11 1234689999999999999976677666665 899999999999999999999999998899
Q ss_pred ceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHH
Q 005406 523 WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDW 599 (698)
Q Consensus 523 w~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~ 599 (698)
||+|||+|++++||.++++||.+|+||+ +|++|+|.+||+++.++|.|.+++|++.++ ++.++++|++.+..
T Consensus 418 ~~~TGD~~~~~~dG~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~---- 492 (546)
T PLN02330 418 WLHTGDIGYIDDDGDIFIVDRIKELIKY-KGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKA---- 492 (546)
T ss_pred ceecccEEEEeCCCcEEEEechHHhhhc-CCEEECHHHHHHHHHhCCchheEEEEeccccccCceeEEEEEECCCC----
Confidence 9999999999999999999999999997 799999999999999999999999998543 56788998887532
Q ss_pred HHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 600 AASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
.. + .++|+++++ ..|+.|++|+.|++++++| +|++||++|++|++++...
T Consensus 493 ----~~----------~-------~~~l~~~~~-~~l~~~~~p~~~~~v~~iP------~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 493 ----KE----------S-------EEDILNFVA-ANVAHYKKVRVVQFVDSIP------KSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred ----CC----------C-------HHHHHHHHH-HhcccccCceEEEEeccCC------CCCCcceeHHHHHHHHHhh
Confidence 00 0 234555554 6799999999999999999 9999999999999998653
No 54
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.9e-66 Score=585.49 Aligned_cols=523 Identities=20% Similarity=0.253 Sum_probs=399.6
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
.|+.++|.+.++++|+++|+... + ..+||+||+++++++|++|.++|+++||+|+|+++|+++|++++|||
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~ 84 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIYG---K------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAV 84 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEEC---C------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 56899999999999999999763 2 35999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCce-----eEEEEeCCCCCCCCCCCCCCCceE
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSV-----HLIVVVGGKDEHLPSLPSTSGVKL 233 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~ii~~~~~~~~~~~~~~~~~~~~ 233 (698)
+++|++++|+++.++.+++.++++.++++++|++.+....+.++...++.. ..++.++....... .....
T Consensus 85 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 159 (579)
T PLN03102 85 PMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKR-----PSSEE 159 (579)
T ss_pred HhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccC-----Ccccc
Confidence 999999999999999999999999999999999887766555544333211 12344432211100 01112
Q ss_pred eeHHHHHhcCCCCCCC----CCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhH
Q 005406 234 ISYLQLQSQGCSSPQP----FCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHI 309 (698)
Q Consensus 234 ~~~~~~~~~~~~~~~~----~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 309 (698)
.+++++.......+.. .....++++++|+|||||||.||||+++|+++............+...+++++.+|++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~ 239 (579)
T PLN03102 160 LDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHC 239 (579)
T ss_pred cCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhh
Confidence 4566665443221111 112457899999999999999999999999975544333333456677899999999999
Q ss_pred HHHHHHHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Q 005406 310 YERANQIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIV 388 (698)
Q Consensus 310 ~~~~~~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~ 388 (698)
+++...+.++..|+++++.+ +++..+++.|++++||++.++|+++..|.+......
T Consensus 240 ~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~----------------------- 296 (579)
T PLN03102 240 NGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDL----------------------- 296 (579)
T ss_pred cchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCccccc-----------------------
Confidence 99888778888898888776 688899999999999999999999998876311000
Q ss_pred cCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC---------
Q 005406 389 SGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD--------- 459 (698)
Q Consensus 389 ~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~--------- 459 (698)
....+++.+++||+++++.+.++++. +|++++++||+||+++.++.....+
T Consensus 297 -------------------~~~~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 356 (579)
T PLN03102 297 -------------------SPRSGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQ 356 (579)
T ss_pred -------------------CCcccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCccccccccccccccCCccc
Confidence 00035778999999999999998876 6999999999999986443221100
Q ss_pred -----CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEec
Q 005406 460 -----NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP 534 (698)
Q Consensus 460 -----~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~ 534 (698)
...+..+.++++ +++++.+.+..++.+ .+..|||+++|++++.|||++|+.|.+.| .+|||+|||+|++|+
T Consensus 357 ~~~~~~~~g~~~~~~~~--v~i~~~~~~~~v~~~-~~~~GEl~v~g~~~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~ 432 (579)
T PLN03102 357 QMELKARQGVSILGLAD--VDVKNKETQESVPRD-GKTMGEIVIKGSSIMKGYLKNPKATSEAF-KHGWLNTGDVGVIHP 432 (579)
T ss_pred ccccccCCCcccccccc--eEEeccccccccCCC-CCCceEEEEECcchhhhhcCChhhhHhhh-ccCceecCceEEEcC
Confidence 112333444444 455554444433321 11379999999999999999999999999 689999999999999
Q ss_pred CCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHH
Q 005406 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLE 611 (698)
Q Consensus 535 ~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~ 611 (698)
||+++|+||.||+||. +|++|+|.+||+++.+||.|.+++|++.++ ++.++|+|++.++... ......
T Consensus 433 dG~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~--------~~~~~~ 503 (579)
T PLN03102 433 DGHVEIKDRSKDIIIS-GGENISSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETT--------KEDRVD 503 (579)
T ss_pred CCeEEEEeccCcEEEE-CCEEECHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccc--------cccccc
Confidence 9999999999999996 899999999999999999999999999654 4689999998753210 000000
Q ss_pred HhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH-HHHHHhcc
Q 005406 612 QLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA-ISNMYAEL 685 (698)
Q Consensus 612 ~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~-i~~ly~~~ 685 (698)
+.. .-..+++++++ .+|+.|++|..|++++++| +|++||++|++|++.+.+. .++-|...
T Consensus 504 ~~~-------~~~~~l~~~~~-~~L~~~~~P~~i~~~~~~P------~t~~gKi~r~~L~~~~~~~~~~~~~~~~ 564 (579)
T PLN03102 504 KLV-------TRERDLIEYCR-ENLPHFMCPRKVVFLQELP------KNGNGKILKPKLRDIAKGLVVEDEDNVI 564 (579)
T ss_pred ccc-------ccHHHHHHHHH-hhcccccCCeEEEEcccCC------CCCcccccHHHHHHHHHHhhhHHHHHHH
Confidence 000 01345677775 6799999999999999999 9999999999999998663 34444433
No 55
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=3.1e-66 Score=580.36 Aligned_cols=494 Identities=21% Similarity=0.267 Sum_probs=403.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|+++++++|+++|+.+. .+.+||+||.++++++|.+|.+.|+++|++|+++++|+++|+++++
T Consensus 21 ~~~~l~~~~~~~a~~~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 91 (527)
T TIGR02275 21 QDKPLTDILRDQAARYPDAIAIICG---------NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFF 91 (527)
T ss_pred cCCcHHHHHHHHHHHCCCceEEEeC---------CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHH
Confidence 3567999999999999999999653 2469999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchH-----HHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCc
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLN-----TLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGV 231 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 231 (698)
||+++|++++++++.++.+++.++++.+++++++++..... .........+.++.++........
T Consensus 92 a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 161 (527)
T TIGR02275 92 ALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVE---------- 161 (527)
T ss_pred HHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCc----------
Confidence 99999999999999999999999999999999999865321 112222234455555554321100
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHH
Q 005406 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYE 311 (698)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~ 311 (698)
..+...+..... ..+.....++++++|+|||||||.||||++||+++...+......+.++++|++++.+|++|.++
T Consensus 162 --~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~ 238 (527)
T TIGR02275 162 --AELFLWLESPAE-PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYP 238 (527)
T ss_pred --chhhHHhhCcCc-cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhh
Confidence 011111111111 11223456899999999999999999999999999988887777788899999999999999999
Q ss_pred HHH--HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHH
Q 005406 312 RAN--QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIV 388 (698)
Q Consensus 312 ~~~--~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~ 388 (698)
+.. .+.++..|+++++.+ +++..+++.++++++|++.++|.++..+.+......
T Consensus 239 ~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~----------------------- 295 (527)
T TIGR02275 239 LSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSR----------------------- 295 (527)
T ss_pred hhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccC-----------------------
Confidence 875 577889999998866 689999999999999999999999987765321100
Q ss_pred cCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccC-CCCCCCCCccC
Q 005406 389 SGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAID-KGDNLSGHVGS 467 (698)
Q Consensus 389 ~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~-~~~~~~~~vG~ 467 (698)
....++|.+++||+++++++.+.+.+.+|+++++.||+||++...+... ..+...+++|+
T Consensus 296 -------------------~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 356 (527)
T TIGR02275 296 -------------------YDLSSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGR 356 (527)
T ss_pred -------------------CCccceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCccccccccCCC
Confidence 0014899999999999999999999989999999999999764433221 12234568999
Q ss_pred CC-CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCC
Q 005406 468 PN-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKN 546 (698)
Q Consensus 468 p~-~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d 546 (698)
|+ ++++++|+| ++++..+.+. .|||+++|++++.|||++++.|.+.|+.+|||+|||+|+++++|+++++||.||
T Consensus 357 ~~~~~~~v~i~d-~~g~~~~~g~---~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d 432 (527)
T TIGR02275 357 PMSPDDEVRVVD-DHGNPVAPGE---TGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKD 432 (527)
T ss_pred CCCCCceEEEEC-CCCCCCCCCC---ceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccc
Confidence 99 589999999 4555555554 899999999999999999999999999999999999999999999999999999
Q ss_pred eEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHH
Q 005406 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAV 623 (698)
Q Consensus 547 ~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 623 (698)
+||+ +|++|+|.+||++|.+||+|.+++|++.++ ++.++|+|+++++. . .
T Consensus 433 ~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~~---------~-----------------~ 485 (527)
T TIGR02275 433 QINR-GGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDPA---------L-----------------K 485 (527)
T ss_pred eeec-CCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCCC---------C-----------------C
Confidence 9996 899999999999999999999999999764 36788999887631 0 1
Q ss_pred HHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHH
Q 005406 624 LAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAK 671 (698)
Q Consensus 624 ~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~ 671 (698)
..+|++++++.+++.|++|..|++++++| +|++||++|++|+
T Consensus 486 ~~~l~~~l~~~~l~~~~~P~~i~~v~~iP------~t~sGKv~r~~L~ 527 (527)
T TIGR02275 486 AAQLRRFLRERGLAEYKLPDRVEFIDSLP------LTAVGKIDKKALR 527 (527)
T ss_pred HHHHHHHHHhCCCccccCCCEEEEeccCC------CCCccceeHHhcC
Confidence 34566666545699999999999999999 9999999999874
No 56
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.5e-67 Score=700.66 Aligned_cols=537 Identities=18% Similarity=0.193 Sum_probs=438.2
Q ss_pred chHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHH
Q 005406 3 DSSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLH 82 (698)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~ 82 (698)
+..|+++|.++|.+++++|+.+++++++..+..... +...... ...+.+...+++
T Consensus 3669 ~~~l~~~f~~~L~~l~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~------~~~~~~~~~~~~ 3723 (4334)
T PRK05691 3669 VERLLGEFKRLLLALVQGFHGDLSELPLLGEQERDF-------------------LLDGCNR------SERDYPLEQSYV 3723 (4334)
T ss_pred HHHHHHHHHHHHHHHHhCcCCChhhcCCCCHHHHHH-------------------HHHhhCC------ccCCCccccCHH
Confidence 457899999999999999999999999876542100 0000000 001123456899
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcC
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYS 162 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G 162 (698)
++|+++++++||++|+.+. ++ .+||+||+++++++|++|.+.|+++|++|+|++++++++++++|||+++|
T Consensus 3724 ~~~~~~~~~~p~~~Av~~~---~~------~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG 3794 (4334)
T PRK05691 3724 RLFEAQVAAHPQRIAASCL---DQ------QWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAG 3794 (4334)
T ss_pred HHHHHHHHhCCCceEEEcC---CC------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhC
Confidence 9999999999999999765 44 39999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCce--eEEEEeCCCCCCCCCCCCCCCceEeeHHHHH
Q 005406 163 YISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSV--HLIVVVGGKDEHLPSLPSTSGVKLISYLQLQ 240 (698)
Q Consensus 163 ~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (698)
+++|||+|.+|.+++.++++++++++++++.............+... ..++..++ ..
T Consensus 3795 ~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~ 3853 (4334)
T PRK05691 3795 AGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE---------------------VQ 3853 (4334)
T ss_pred cEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc---------------------cc
Confidence 99999999999999999999999999999987654433333222211 11222111 10
Q ss_pred hcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHH
Q 005406 241 SQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVY 320 (698)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~ 320 (698)
........+.....|+++|||+|||||||.||||+++|+++++.+.+....++++++|+++++.|++|+.+....+.+++
T Consensus 3854 ~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~ 3933 (4334)
T PRK05691 3854 AGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAPL 3933 (4334)
T ss_pred cccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHHh
Confidence 00111112223457899999999999999999999999999999988888899999999999999999999999999999
Q ss_pred hCcEEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchh
Q 005406 321 YGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKM 396 (698)
Q Consensus 321 ~G~~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~ 396 (698)
.|+++++.+ .++..+.+.++++++|++.++|+++..+.+....
T Consensus 3934 ~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~--------------------------------- 3980 (4334)
T PRK05691 3934 FGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQ--------------------------------- 3980 (4334)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccc---------------------------------
Confidence 999999886 4788999999999999999999999887642100
Q ss_pred hHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCC----CCCCCccCCCCC
Q 005406 397 WDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD----NLSGHVGSPNPA 471 (698)
Q Consensus 397 ~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~----~~~~~vG~p~~~ 471 (698)
..++||.+++|||++++++.+.|.+.+ +++++|.||+||++..++...... ....++|+|++|
T Consensus 3981 ------------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~ 4048 (4334)
T PRK05691 3981 ------------ALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDN 4048 (4334)
T ss_pred ------------cCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCC
Confidence 014899999999999999999887764 789999999999998776543222 233579999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhccccc-------CCCceecCcEEEEecCCcEEEEccC
Q 005406 472 CEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID-------GDGWLHTGDIGLWLPGGRLKIIDRK 544 (698)
Q Consensus 472 ~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~-------~~gw~~TGDlg~~~~~G~l~i~GR~ 544 (698)
++++|+| +.+..++.|. .|||||+|+++++||+++|+.|+++|. +++||+|||+|++++||.|+|+||+
T Consensus 4049 ~~~~v~d-~~~~~~p~g~---~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~ 4124 (4334)
T PRK05691 4049 NRLYLLD-EALELVPLGA---VGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRI 4124 (4334)
T ss_pred CEEEEEC-CCCCCCCCCC---ceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEeccc
Confidence 9999998 5566666665 899999999999999999999999993 4579999999999999999999999
Q ss_pred CCeEecCCceeecchHHHHHHhcCcCceeEEEEEc--CCCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHH
Q 005406 545 KNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGD--SFNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAA 622 (698)
Q Consensus 545 ~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~--~~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (698)
|++||+ +|++|++.|||++|.++|+|.+|+|+.. ..++.++|++++..... .. ..
T Consensus 4125 d~qvki-~G~riel~eIE~~l~~~~~v~~a~v~~~~~~~~~~l~a~~~~~~~~~------------------~~----~~ 4181 (4334)
T PRK05691 4125 DHQVKI-RGYRIELGEIEARLHEQAEVREAAVAVQEGVNGKHLVGYLVPHQTVL------------------AQ----GA 4181 (4334)
T ss_pred CCcEEe-ceEEecHHHHHHHHHhCCCccEEEEEEecCCCCcEEEEEEeCCcccc------------------cc----hH
Confidence 999998 8999999999999999999999988753 33578999999875320 01 12
Q ss_pred HHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHH
Q 005406 623 VLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKER 673 (698)
Q Consensus 623 i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~ 673 (698)
..++|++.++ .+||.|++|..++.++++| +|++|||+|++|.+.
T Consensus 4182 ~~~~l~~~l~-~~Lp~ymvP~~~~~~~~lP------~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4182 LLERIKQRLR-AELPDYMVPLHWLWLDRLP------LNANGKLDRKALPAL 4225 (4334)
T ss_pred HHHHHHHHHH-hhCChhhcCcceeecccCC------CCCCCcccHhhcCCC
Confidence 2455666665 7899999999999999999 999999999999764
No 57
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.3e-67 Score=705.94 Aligned_cols=533 Identities=17% Similarity=0.193 Sum_probs=438.1
Q ss_pred chHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHH
Q 005406 3 DSSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLH 82 (698)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~ 82 (698)
+..|+++|.++|.++.++|+.++++++|....... .+...... ...+.+...+++
T Consensus 460 i~~l~~~~~~lL~~i~~~p~~~i~~l~~~~~~~~~-------------------~~~~~~~~------~~~~~~~~~~~~ 514 (5163)
T PRK12316 460 VERMARHWQNLLRGMVENPQARVDELPMLDAEERG-------------------QLVEGWNA------TAAEYPLQRGVH 514 (5163)
T ss_pred HHHHHHHHHHHHHHHHhccccccccCCCCCHHHHH-------------------HHHHHhcC------ccccCCCCCCHH
Confidence 45789999999999999999999999988755310 00000000 011123356899
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcC
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYS 162 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G 162 (698)
++|.+.++++||++|+.+. + +.+||+||.++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|
T Consensus 515 ~~~~~~a~~~p~~~A~~~~---~------~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG 585 (5163)
T PRK12316 515 RLFEEQVERTPEAPALAFG---E------ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAG 585 (5163)
T ss_pred HHHHHHHHHCCCCeEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 9999999999999999763 2 459999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhc
Q 005406 163 YISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQ 242 (698)
Q Consensus 163 ~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (698)
+++||++|.++.+++.++++++++++++++......+. ...... ++.++... ....
T Consensus 586 ~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~----~~~~~~-~~~~~~~~------------------~~~~- 641 (5163)
T PRK12316 586 GAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLP----LAAGVQ-VLDLDRPA------------------AWLE- 641 (5163)
T ss_pred CEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCC----cccCce-EEEecCcc------------------hhhc-
Confidence 99999999999999999999999999999875433221 111111 22222111 0000
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhC
Q 005406 243 GCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYG 322 (698)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G 322 (698)
......+.....+++++||+|||||||.||||+++|+++++.+.+....++++++|++++++|++|++++...+.+++.|
T Consensus 642 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G 721 (5163)
T PRK12316 642 GYSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPLMSG 721 (5163)
T ss_pred cCCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHHhCC
Confidence 00111222345789999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred cEEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhH
Q 005406 323 VAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWD 398 (698)
Q Consensus 323 ~~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d 398 (698)
+++++.+ .++..+++.++++++|++.++|+++..|.+....
T Consensus 722 ~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~----------------------------------- 766 (5163)
T PRK12316 722 ARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDV----------------------------------- 766 (5163)
T ss_pred CEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcccc-----------------------------------
Confidence 9999985 6889999999999999999999999888642000
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCC--CCCCCCCccCCCCCcEEE
Q 005406 399 RLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDK--GDNLSGHVGSPNPACEIK 475 (698)
Q Consensus 399 ~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~--~~~~~~~vG~p~~~~~v~ 475 (698)
...+++|.+++||+++++++.+.|.+.+ +++++|.||+||+++.++.... ......++|+|++|++++
T Consensus 767 ---------~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~ 837 (5163)
T PRK12316 767 ---------ASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACY 837 (5163)
T ss_pred ---------ccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEE
Confidence 0014899999999999999999887655 7899999999999865543322 224456899999999999
Q ss_pred EEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhccccc------CCCceecCcEEEEecCCcEEEEccCCCeEe
Q 005406 476 LVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (698)
Q Consensus 476 i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~------~~gw~~TGDlg~~~~~G~l~i~GR~~d~ik 549 (698)
|+| +++..++.|. .|||+|+|+++++||+++|+.|+++|. +++||+|||+|++++||.|+|+||+||+||
T Consensus 838 i~d-~~~~~~p~G~---~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik 913 (5163)
T PRK12316 838 ILD-ANLEPVPVGV---LGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVK 913 (5163)
T ss_pred EEC-CCCCCCCCCC---ceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEE
Confidence 999 5566666665 899999999999999999999999883 456999999999999999999999999999
Q ss_pred cCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHH
Q 005406 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNA 629 (698)
Q Consensus 550 ls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 629 (698)
+ +|++|+|.|||++|.+||+|.+|+|++.+ ++.++|+|++.++. . ...++|++
T Consensus 914 ~-~G~rI~~~EIE~~l~~~p~V~~a~V~~~~-~~~lva~vv~~~~~--------~-----------------~~~~~l~~ 966 (5163)
T PRK12316 914 L-RGLRIELGEIEARLLEHPWVREAAVLAVD-GKQLVGYVVLESEG--------G-----------------DWREALKA 966 (5163)
T ss_pred E-ceEEcChHHHHHHHHhCCCcceEEEEEcC-CCeEEEEEEccCCC--------C-----------------CCHHHHHH
Confidence 8 89999999999999999999999999987 78999999987632 0 11356677
Q ss_pred HHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 630 VGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 630 ~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
+++ .+||.|++|+.|++++++| +|++||++|++|.+.+.
T Consensus 967 ~l~-~~Lp~y~vP~~i~~v~~lP------~t~~GKidr~~L~~~~~ 1005 (5163)
T PRK12316 967 HLA-ASLPEYMVPAQWLALERLP------LTPNGKLDRKALPAPEA 1005 (5163)
T ss_pred HHH-hhCCCccCCCeEEEHhhCC------CCCCCChhHHhhcCccc
Confidence 775 7899999999999999999 99999999999987543
No 58
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-66 Score=577.22 Aligned_cols=485 Identities=24% Similarity=0.317 Sum_probs=401.2
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..+.+.|++.++.+||++|+.+. .+.+||+||+++++++|++|++ .|+++|++|+++++|+++|+++++|
T Consensus 2 ~~~~~~~~~~a~~~p~~~a~~~~---------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la 72 (496)
T PRK06839 2 QGIAYWIEKRAYLHPDRIAIITE---------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFA 72 (496)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEC---------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 35788999999999999999652 2569999999999999999985 7999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHH
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (698)
|+++|++++|++++++.+++.++++.+++++++++......+........ ...++.+. ++.
T Consensus 73 ~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~------------------~~~ 133 (496)
T PRK06839 73 IAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSY-VQRVISIT------------------SLK 133 (496)
T ss_pred HHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccC-cceEEEec------------------chH
Confidence 99999999999999999999999999999999998776555444332211 12222222 222
Q ss_pred HHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-HH
Q 005406 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QI 316 (698)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~ 316 (698)
++.... ........++++++|+|||||||.||+|+++|.++..........+++..+|++++.+|++|.+++.. .+
T Consensus 134 ~~~~~~---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~ 210 (496)
T PRK06839 134 EIEDRK---IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAF 210 (496)
T ss_pred hhhccC---CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHH
Confidence 222211 11223456789999999999999999999999998776655555677889999999999999999876 46
Q ss_pred HHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCch
Q 005406 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (698)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (698)
.++..|+++++.+ .++..+++.++++++|++.++|.++..+.......
T Consensus 211 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------------------- 259 (496)
T PRK06839 211 PTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFE------------------------------- 259 (496)
T ss_pred HHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccc-------------------------------
Confidence 7889999988876 79999999999999999999999999887631100
Q ss_pred hhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC--CCCCCccCCCCCcE
Q 005406 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD--NLSGHVGSPNPACE 473 (698)
Q Consensus 396 ~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~~~~~ 473 (698)
.....++|.+++||+++++++.+.++.. |+++++.||+||++..++...... ...+++|+|+++++
T Consensus 260 -----------~~~~~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~ 327 (496)
T PRK06839 260 -----------TTNLQSVRWFYNGGAPCPEELMREFIDR-GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCD 327 (496)
T ss_pred -----------cCCCcccceEEECCCCCCHHHHHHHHHh-CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCce
Confidence 0011589999999999999999999886 999999999999987554433222 45689999999999
Q ss_pred EEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCc
Q 005406 474 IKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQG 553 (698)
Q Consensus 474 v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G 553 (698)
++|+|+ ++..++.++ .|||+|+|+.++.||+++++.+...+ .+|||+|||+|+++++|.++++||.||+||. +|
T Consensus 328 ~~i~d~-~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~-~G 401 (496)
T PRK06839 328 YELIDE-NKNKVEVGE---VGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARVDEDGFVYIVGRKKEMIIS-GG 401 (496)
T ss_pred EEEECC-CcCCCCCCC---ceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEEcCCCcEEEeccccceEEE-CC
Confidence 999994 445455554 89999999999999999999999888 6899999999999999999999999999995 89
Q ss_pred eeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHH
Q 005406 554 EYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAV 630 (698)
Q Consensus 554 ~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 630 (698)
++|+|.+||+++.++|+|.+++|+|.++ ++.++++|+++++. ..+ .++|+++
T Consensus 402 ~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~--------~~~-----------------~~~l~~~ 456 (496)
T PRK06839 402 ENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSS--------VLI-----------------EKDVIEH 456 (496)
T ss_pred EEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCC--------CCC-----------------HHHHHHH
Confidence 9999999999999999999999999653 46789999987632 011 2455666
Q ss_pred HHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 631 GKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 631 ~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
++ ..|+.|++|..|++++++| +|++||++|++|+++.+
T Consensus 457 ~~-~~l~~~~~P~~~~~v~~~P------~t~~GKi~r~~l~~~~~ 494 (496)
T PRK06839 457 CR-LFLAKYKIPKEIVFLKELP------KNATGKIQKAQLVNQLK 494 (496)
T ss_pred HH-hhCcCCCCCcEEEEeccCC------CCccccccHHHHHHHhh
Confidence 64 6799999999999999999 99999999999998764
No 59
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-66 Score=574.44 Aligned_cols=475 Identities=20% Similarity=0.234 Sum_probs=393.0
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
+++.+.|+++++++||++|+.+. + +.+||.||.+++.++|++|.+.|. +|++|+|+++|+++|+++++||
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~ 70 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN---D------RVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGA 70 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC---C------cEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHH
Confidence 46789999999999999999653 2 459999999999999999999984 7999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHH
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (698)
+++|++++|+++.++.+++.++++.+++++++++......+... ...++.++. +.+
T Consensus 71 ~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~------------------~~~ 126 (487)
T PRK07638 71 AMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE------EGRVIEIDE------------------WKR 126 (487)
T ss_pred HHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc------cceEEEehh------------------hhh
Confidence 99999999999999999999999999999999987544332211 011222211 111
Q ss_pred HHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHH
Q 005406 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVS 318 (698)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 318 (698)
....... .........+++++|+|||||||.||||+++|++++..+......+++.++|+++...|++|..++...+.+
T Consensus 127 ~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~ 205 (487)
T PRK07638 127 MIEKYLP-TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAIST 205 (487)
T ss_pred hhhhccc-cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHH
Confidence 1111111 011112235678999999999999999999999999888877777888999999999999999988778889
Q ss_pred HHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhh
Q 005406 319 VYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (698)
Q Consensus 319 l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (698)
++.|+++++.+ +++..+++.++++++|+++++|+++..+.+..
T Consensus 206 l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------------------------------------ 249 (487)
T PRK07638 206 LYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKEN------------------------------------ 249 (487)
T ss_pred HccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc------------------------------------
Confidence 99999999887 68999999999999999999999998887520
Q ss_pred HHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCC-CCCCCCccCCCCCcEEE
Q 005406 398 DRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIK 475 (698)
Q Consensus 398 d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~ 475 (698)
....+.+.+++||++++++..+++...+ ++.+++.||+||++.++...... ....+++|+|+++++++
T Consensus 250 ----------~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 319 (487)
T PRK07638 250 ----------RVIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVR 319 (487)
T ss_pred ----------CcCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEE
Confidence 0012455678899999999999999888 78999999999998766544322 24567899999999999
Q ss_pred EEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCcee
Q 005406 476 LVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEY 555 (698)
Q Consensus 476 i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~ 555 (698)
|+| +++..++.+ +.|||+++|+.++.|||++++.+.+.+ .+|||+|||+|++|++|+++++||++|+||+ +|++
T Consensus 320 i~d-~~g~~~~~g---~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~-~G~~ 393 (487)
T PRK07638 320 ICN-EAGEEVQKG---EIGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDEEGFIYIVGREKNMILF-GGIN 393 (487)
T ss_pred EEC-CCCCCCCCC---CCeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcCCCeEEEEecCCCeEEe-CCEE
Confidence 999 455655555 489999999999999999999887765 7899999999999999999999999999997 8999
Q ss_pred ecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHH
Q 005406 556 VAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGK 632 (698)
Q Consensus 556 v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 632 (698)
|+|.+||+++.++|+|.+++|++..+ ++.++++|+.... .++++++++
T Consensus 394 v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~-----------------------------~~~l~~~~~ 444 (487)
T PRK07638 394 IFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKGSAT-----------------------------KQQLKSFCL 444 (487)
T ss_pred ECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEECCCC-----------------------------HHHHHHHHH
Confidence 99999999999999999999999654 4677888764221 344555554
Q ss_pred hCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 633 EGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 633 ~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
..|+.|++|+.|++++++| +|++||++|++|++++.+
T Consensus 445 -~~l~~~~~p~~i~~v~~iP------~t~~GKv~r~~L~~~~~~ 481 (487)
T PRK07638 445 -QRLSSFKIPKEWHFVDEIP------YTNSGKIARMEAKSWIEN 481 (487)
T ss_pred -HHhhcccCCcEEEEecccC------CCCcccccHHHHHHHHhc
Confidence 6789999999999999999 999999999999988754
No 60
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=5.9e-67 Score=646.03 Aligned_cols=529 Identities=17% Similarity=0.189 Sum_probs=428.8
Q ss_pred chHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHH
Q 005406 3 DSSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLH 82 (698)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~ 82 (698)
+..++++|.+++++++.+|+.++++++|...... . + +.. + +. . ..+. ...++.
T Consensus 409 i~~l~~~~~~ll~~~~~~p~~~i~~~~~~~~~~~--~---~---~~~------~----~~-~-------~~~~-~~~~l~ 461 (1296)
T PRK10252 409 LIAHAERLKALIAQFAADPALLCGDVDILLPGEY--A---Q---LAQ------V----NA-T-------AVEI-PETTLS 461 (1296)
T ss_pred HHHHHHHHHHHHHHHHhCCCCChhhcCCCCHHHH--H---H---HHH------h----cC-C-------CCCC-CcCCHH
Confidence 3467889999999999999999999998764421 0 0 000 0 00 0 0011 236899
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcC
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYS 162 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G 162 (698)
++|++.++++||++|+.+. + +.+||+||.++++++|++|.+.|+++|++|+|+++|+++++++++||+++|
T Consensus 462 ~~~~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G 532 (1296)
T PRK10252 462 ALVAQQAAKTPDAPALADA---R------YQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAG 532 (1296)
T ss_pred HHHHHHHHhCCCCeEEEcC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 9999999999999999654 2 359999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhc
Q 005406 163 YISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQ 242 (698)
Q Consensus 163 ~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (698)
++++|++++++.+++.++++++++++++++.+....+.. .+.+.. +. +......
T Consensus 533 ~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~----~~~~~~-~~---------------------~~~~~~~ 586 (1296)
T PRK10252 533 AAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFAD----VPDLTS-LC---------------------YNAPLAP 586 (1296)
T ss_pred CEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhccc----CCCcee-ee---------------------ccccccc
Confidence 999999999999999999999999999998765443221 111111 11 1110000
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhC
Q 005406 243 GCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYG 322 (698)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G 322 (698)
. ...+.....+++++||+|||||||.||||+++|+++++.+.+....+++.++|++++..|++|.+++...+.+++.|
T Consensus 587 ~--~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G 664 (1296)
T PRK10252 587 Q--GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAG 664 (1296)
T ss_pred c--cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCC
Confidence 0 00111223678999999999999999999999999999999888889999999999999999999998899999999
Q ss_pred cEEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhH
Q 005406 323 VAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWD 398 (698)
Q Consensus 323 ~~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d 398 (698)
+++++.+ .++..+.+.++++++|++.++|+++..+.+.......
T Consensus 665 ~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~-------------------------------- 712 (1296)
T PRK10252 665 AKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGA-------------------------------- 712 (1296)
T ss_pred CEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccc--------------------------------
Confidence 9999976 4888999999999999999999999887653211000
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC-------CCCCCccCCCCC
Q 005406 399 RLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD-------NLSGHVGSPNPA 471 (698)
Q Consensus 399 ~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-------~~~~~vG~p~~~ 471 (698)
.....++|.+++||+++++++.+.|.+.++++++|.||+||++..++...... ....++|+|+++
T Consensus 713 --------~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~ 784 (1296)
T PRK10252 713 --------RQSCASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWN 784 (1296)
T ss_pred --------cccCCCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCC
Confidence 00014799999999999999999999888999999999999987666543221 234679999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccC------CCceecCcEEEEecCCcEEEEccCC
Q 005406 472 CEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG------DGWLHTGDIGLWLPGGRLKIIDRKK 545 (698)
Q Consensus 472 ~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~------~gw~~TGDlg~~~~~G~l~i~GR~~ 545 (698)
++++|+| ++++.++.|. .|||+|+|+++++||+++|+.|++.|.. ++||+|||+|++++||.++|+||.|
T Consensus 785 ~~~~i~d-~~~~~~~~g~---~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d 860 (1296)
T PRK10252 785 TGLRILD-ARMRPVPPGV---AGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSD 860 (1296)
T ss_pred CEEEEEC-CCCCCCCCCC---ceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccC
Confidence 9999999 5666666665 8999999999999999999999999843 4599999999999999999999999
Q ss_pred CeEecCCceeecchHHHHHHhcCcCceeEEEEEc-------CC--CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCC
Q 005406 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGD-------SF--NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCND 616 (698)
Q Consensus 546 d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~-------~~--~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (698)
++||+ +|++|+|.|||++|.+||+|.+++|++. .. ...++|+|++..+. ..+
T Consensus 861 ~~ik~-~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~--------~~~---------- 921 (1296)
T PRK10252 861 DQLKI-RGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGL--------PLD---------- 921 (1296)
T ss_pred CeEEE-eeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCC--------CCC----------
Confidence 99998 8999999999999999999999987653 11 24799999987531 001
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHH
Q 005406 617 PRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKE 672 (698)
Q Consensus 617 ~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~ 672 (698)
.++|+++++ .+||.|++|..++.++++| +|++||++|++|.+
T Consensus 922 -------~~~l~~~l~-~~Lp~~~~P~~~~~~~~lP------~t~~GKidr~~L~~ 963 (1296)
T PRK10252 922 -------TSALQAQLR-ERLPPHMVPVVLLQLDQLP------LSANGKLDRKALPL 963 (1296)
T ss_pred -------HHHHHHHHH-hhCchhcCCcEEEEecCCC------CCCCcChhHHhcCC
Confidence 344555664 7899999999999999999 99999999999965
No 61
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-66 Score=578.86 Aligned_cols=498 Identities=22% Similarity=0.271 Sum_probs=407.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|...++++|+++|+.+. + +.+||+||.+++.++|..|++.|+++|++|+|+++|+++++++++
T Consensus 5 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~l 75 (528)
T PRK07470 5 RVMNLAHFLRQAARRFPDRIALVWG---D------RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMF 75 (528)
T ss_pred cCCCHHHHHHHHHHHCCCceEEEEC---C------ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4678999999999999999999653 2 359999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|+++.++.+++.+++++++++.++++.+....+.......+....++.++... ...++
T Consensus 76 A~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 143 (528)
T PRK07470 76 AAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGAR------------AGLDY 143 (528)
T ss_pred HHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCc------------ccccH
Confidence 999999999999999999999999999999999999876555544444444445555554321 12356
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc--cccCCCcEEEEcCChhhHHHHHH
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM--VQFYPSDIYMSYLPLAHIYERAN 314 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~~~~~ 314 (698)
+++...............++++++|+|||||||.||||+++|+++...+...... .+...+|+++.++|++|.+++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~ 223 (528)
T PRK07470 144 EALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQ 223 (528)
T ss_pred HHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHH
Confidence 6665443222223334577999999999999999999999999997655432222 25678899999999999999876
Q ss_pred HHHHHHhCcEEEEeC---CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCC
Q 005406 315 QIVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQ 391 (698)
Q Consensus 315 ~~~~l~~G~~~~~~~---~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~ 391 (698)
.+ .++.|++.++.+ .++..+++.|+++++|++.++|+++..+.+....
T Consensus 224 ~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------------------- 274 (528)
T PRK07470 224 LC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAV---------------------------- 274 (528)
T ss_pred HH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCc----------------------------
Confidence 44 567777777664 5889999999999999999999999887652100
Q ss_pred CCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCC--------CCCCCC
Q 005406 392 TPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK--------GDNLSG 463 (698)
Q Consensus 392 ~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~--------~~~~~~ 463 (698)
.....+++|.+++||+++++...+++...+|.++++.||+||+++.++.... .....+
T Consensus 275 --------------~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~ 340 (528)
T PRK07470 275 --------------DRYDHSSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIG 340 (528)
T ss_pred --------------CCCCCcceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccccccceee
Confidence 0001158999999999999999999988889999999999999876554322 123457
Q ss_pred CccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEcc
Q 005406 464 HVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDR 543 (698)
Q Consensus 464 ~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR 543 (698)
++|.|+++++++++| +++..++.++ .|||+++|+.++.||+++++.+++.| .+|||+|||+|+++++|++++.||
T Consensus 341 ~~G~~~~g~~~~i~d-~~~~~~~~g~---~Gel~i~~~~~~~gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR 415 (528)
T PRK07470 341 TCGFERTGMEVQIQD-DEGRELPPGE---TGEICVIGPAVFAGYYNNPEANAKAF-RDGWFRTGDLGHLDARGFLYITGR 415 (528)
T ss_pred ccCcccCCcEEEEEC-CCCCCCCCCC---ceEEEEeCCccchhhcCCHHHHHhhh-cCCcEecceeEEEccCCeEEEeCC
Confidence 899999999999999 5566666554 89999999999999999999999888 689999999999999999999999
Q ss_pred CCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHH
Q 005406 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRAR 620 (698)
Q Consensus 544 ~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (698)
.||+||+ +|++|+|.+||+++.++|.|.+|+|++.++ ++.+++++++.+.. ..+
T Consensus 416 ~dd~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~--------~~~-------------- 472 (528)
T PRK07470 416 ASDMYIS-GGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARDGA--------PVD-------------- 472 (528)
T ss_pred ccceEEe-CCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECCCC--------CCC--------------
Confidence 9999996 899999999999999999999999999654 35678888876531 011
Q ss_pred HHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 621 AAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 621 ~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.++++++++ ..|+.|++|..+++++++| +|++||++|+.|++.|++
T Consensus 473 ---~~~~~~~l~-~~l~~~~~P~~~~~~~~iP------~t~~GKi~r~~l~~~~~~ 518 (528)
T PRK07470 473 ---EAELLAWLD-GKVARYKLPKRFFFWDALP------KSGYGKITKKMVREELEE 518 (528)
T ss_pred ---HHHHHHHHH-HhhhcCCCCcEEEEeccCC------CCCcccccHHHHHHHHHh
Confidence 234555554 6789999999999999999 999999999999988764
No 62
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.4e-65 Score=578.04 Aligned_cols=508 Identities=20% Similarity=0.279 Sum_probs=416.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..|+.++|++.++++||++|+.+. ++ +.+||+||+++++++|++|++.|+++||+|+++++|+++|+++++|
T Consensus 22 ~~~l~~~~~~~~~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA 93 (547)
T PRK06087 22 DASLADYWQQTARAMPDKIAVVDN---HG-----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLA 93 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEcC---CC-----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 357999999999999999998653 22 4589999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc-----hHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCce
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT-----LNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 232 (698)
|+++|++++|+++.++.+++.++++.+++++++++... ...+......++.++.++.++...... .
T Consensus 94 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 164 (547)
T PRK06087 94 CLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPAT---------S 164 (547)
T ss_pred HHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCc---------C
Confidence 99999999999999999999999999999999997532 233444444556666666665432110 1
Q ss_pred EeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHH
Q 005406 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (698)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (698)
..++.++....... .......++++++|+|||||||.||||++||+++..........+++.++|++++.+|++|.+++
T Consensus 165 ~~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 243 (547)
T PRK06087 165 SLSLSQIIADYEPL-TTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGF 243 (547)
T ss_pred ccCHHHHhccCCcc-cCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHH
Confidence 13455555432211 12234567899999999999999999999999998888777777788999999999999999998
Q ss_pred HH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005406 313 AN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (698)
Q Consensus 313 ~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (698)
.. .+.+++.|+++++.+ .++..+++.++++++|+++++|..+..++......
T Consensus 244 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~-------------------------- 297 (547)
T PRK06087 244 LHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQ-------------------------- 297 (547)
T ss_pred HHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccC--------------------------
Confidence 76 667888999999887 78999999999999999998877766665421100
Q ss_pred CCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC--CCCCCccCC
Q 005406 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD--NLSGHVGSP 468 (698)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p 468 (698)
....+++|.+++||+++++++.+.+... |+++++.||+||++...+...... ...+++|.|
T Consensus 298 ----------------~~~~~~lr~i~~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~ 360 (547)
T PRK06087 298 ----------------PADLSALRFFLCGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYA 360 (547)
T ss_pred ----------------CCCCCCeEEEEEcCCCCCHHHHHHHHHc-CCcEEEEecccccCCccccCCCcchhhcCCcCCcc
Confidence 0011589999999999999999988774 999999999999987665433221 234678999
Q ss_pred CCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeE
Q 005406 469 NPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIF 548 (698)
Q Consensus 469 ~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~i 548 (698)
+++++++++| +++..++.+. .|||+++|+.++.||+++++.+...|+.+|||+|||+|++|++|.++++||.+|+|
T Consensus 361 ~~~~~~~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i 436 (547)
T PRK06087 361 AAGVEIKVVD-EARKTLPPGC---EGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDII 436 (547)
T ss_pred CCCceEEEEc-CCCCCCcCCC---cceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhh
Confidence 9999999999 5556555554 89999999999999999999999999889999999999999999999999999999
Q ss_pred ecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHH
Q 005406 549 KLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLA 625 (698)
Q Consensus 549 kls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 625 (698)
+. +|++|+|.+||+++.++|+|.+++|++.++ ++.++++|++++... .. ..+
T Consensus 437 ~~-~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~-------~~-----------------~~~ 491 (547)
T PRK06087 437 VR-GGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHH-------SL-----------------TLE 491 (547)
T ss_pred hc-CCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCC-------CC-----------------CHH
Confidence 96 899999999999999999999999999643 467889988765210 00 023
Q ss_pred HHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHH
Q 005406 626 EMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNM 681 (698)
Q Consensus 626 ~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~l 681 (698)
++.+++++..++.|++|..|.+++++| +|.+||++|++|++.+.+++..-
T Consensus 492 ~~~~~~~~~~l~~~~~P~~i~~v~~iP------~t~sGK~~r~~l~~~~~~~~~~~ 541 (547)
T PRK06087 492 EVVAFFSRKRVAKYKYPEHIVVIDKLP------RTASGKIQKFLLRKDIMRRLTQD 541 (547)
T ss_pred HHHHHHHhccccccCCCeEEEEeccCC------CCCCCcCcHHHHHHHHHHHhhhh
Confidence 455554446899999999999999999 99999999999999998876543
No 63
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-65 Score=576.32 Aligned_cols=506 Identities=22% Similarity=0.297 Sum_probs=410.4
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
.++.++|+..+.++|++.++.++ .+ ++++.+||.||.++++++|++|.+.|+++|++|+++++|+++|+++++||
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~--~~---~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~ 84 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRR--VE---GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGV 84 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEee--cc---CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 57899999999999999888654 12 23567999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHH
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (698)
+++|++++|+++.++.+++.++++.+++++++++.+....+.+....++.++.++..++.... . .....+.++++
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~ 159 (539)
T PRK07008 85 SGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHL-P----AGSTPLLCYET 159 (539)
T ss_pred HhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCcc-c----cCCcccccHHH
Confidence 999999999999999999999999999999999987766666655566666666665543211 0 01133567777
Q ss_pred HHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHH--HhcccccccCCCcEEEEcCChhhHHHHHHHH
Q 005406 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNV--AGFSLMVQFYPSDIYMSYLPLAHIYERANQI 316 (698)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~--~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 316 (698)
+....... .......++++++++|||||||.||||++||++++... ......+++.++|++++.+|++|.+++...+
T Consensus 160 l~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~ 238 (539)
T PRK07008 160 LVGAQDGD-YDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPY 238 (539)
T ss_pred HhcccCCC-cCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHH
Confidence 76543221 12234567899999999999999999999999986432 2233457788899999999999998887778
Q ss_pred HHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCc
Q 005406 317 VSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPS 394 (698)
Q Consensus 317 ~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~ 394 (698)
.++..|+++++.+ +++..+++.++++++|++.++|+++..+.+......
T Consensus 239 ~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~----------------------------- 289 (539)
T PRK07008 239 SAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAG----------------------------- 289 (539)
T ss_pred HHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccC-----------------------------
Confidence 8899999999875 689999999999999999999999988875321100
Q ss_pred hhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC-----------CCCC
Q 005406 395 KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD-----------NLSG 463 (698)
Q Consensus 395 ~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-----------~~~~ 463 (698)
...+++|.+++||+++++++.+.+.+.+++++++.||+||++..++...... ....
T Consensus 290 -------------~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (539)
T PRK07008 290 -------------LRFSTLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLE 356 (539)
T ss_pred -------------CCcccceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccCCchhhhhhcc
Confidence 0015899999999999999999999889999999999999987554332110 1236
Q ss_pred CccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEcc
Q 005406 464 HVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDR 543 (698)
Q Consensus 464 ~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR 543 (698)
++|+|+|+++++|+| +++...+.+. +..|||+++|++++.|||++++ ..+ .+|||+|||+|++|+||+++++||
T Consensus 357 ~~G~p~pg~~~~i~d-~~~~~~~~~~-~~~Gei~v~g~~~~~gy~~~~~---~~~-~~g~~~TGD~~~~~~dg~l~~~GR 430 (539)
T PRK07008 357 KQGRVIYGVDMKIVG-DDGRELPWDG-KAFGDLQVRGPWVIDRYFRGDA---SPL-VDGWFPTGDVATIDADGFMQITDR 430 (539)
T ss_pred cCCccccceEEEEEC-CCCCccCCCC-CcceEEEEeCCccchhhcCChh---hhh-cCCCcccCceEEEcCCCcEEEeec
Confidence 799999999999999 4555444321 1369999999999999999984 334 379999999999999999999999
Q ss_pred CCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHH
Q 005406 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRAR 620 (698)
Q Consensus 544 ~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (698)
.||+||. +|++|+|.+||+++..+|.|.+++|++.++ ++.++++|+..++. ..
T Consensus 431 ~~d~i~~-~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~--------------- 486 (539)
T PRK07008 431 SKDVIKS-GGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVVKRPGA--------EV--------------- 486 (539)
T ss_pred ccCEEEe-CCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEEeCCCC--------cc---------------
Confidence 9999995 899999999999999999999999999654 46778888776532 00
Q ss_pred HHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 621 AAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 621 ~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
..++++++++ .+|+.|++|+.|++++++| +|++||++|++|++.+.+
T Consensus 487 --~~~~l~~~~~-~~l~~~~~P~~i~~v~~lP------~t~sgKi~r~~l~~~~~~ 533 (539)
T PRK07008 487 --TREELLAFYE-GKVAKWWIPDDVVFVDAIP------HTATGKLQKLKLREQFRD 533 (539)
T ss_pred --CHHHHHHHHH-hhcccccCCeEEEEecCCC------CCCccceeHHHHHHHHHh
Confidence 1345666665 6899999999999999999 999999999999988765
No 64
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-66 Score=579.53 Aligned_cols=503 Identities=24% Similarity=0.334 Sum_probs=419.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
.-+|+.+.|+.+++.+|+++|+.+. + +.+||.||.++++++|.+|.+.|+++|++|+|+++|+++|+++++
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~ 85 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRFL---G------NTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVL 85 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4578999999999999999999764 3 349999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|+++.++.+++.++++++++++++++......+.......+..+.++..++... ....++
T Consensus 86 a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 155 (542)
T PRK07786 86 AANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSD----------DSVLGY 155 (542)
T ss_pred HHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCc----------ccccCH
Confidence 9999999999999999999999999999999999998776655544444556666666543210 022456
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccccccc-CCCcEEEEcCChhhHHHHHHH
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQF-YPSDIYMSYLPLAHIYERANQ 315 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~~~~~~ 315 (698)
++++...... .+......+++++++|||||||.||||++||+++...+......+++ ..++++++.+|++|.+++...
T Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 234 (542)
T PRK07786 156 EDLLAEAGPA-HAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSM 234 (542)
T ss_pred HHHhhccCCC-CCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHH
Confidence 6665443221 12234456789999999999999999999999998887766666666 678999999999999999888
Q ss_pred HHHHHhCcEEEEeC---CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005406 316 IVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (698)
Q Consensus 316 ~~~l~~G~~~~~~~---~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (698)
+.++..|+++++.+ .++..+++.++++++|.++++|+++..+........
T Consensus 235 ~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~--------------------------- 287 (542)
T PRK07786 235 LPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARP--------------------------- 287 (542)
T ss_pred HHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCc---------------------------
Confidence 89999999999865 589999999999999999999999998876311000
Q ss_pred CchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCC--CCCCCccCCC
Q 005406 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD--NLSGHVGSPN 469 (698)
Q Consensus 393 ~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~ 469 (698)
. ..++|.+++||+++++++.+.+.+.+ ++++++.||+||++.+.+...... ...+++|+|+
T Consensus 288 ----~------------~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 351 (542)
T PRK07786 288 ----R------------DLALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVI 351 (542)
T ss_pred ----c------------CcceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccC
Confidence 0 02699999999999999999999888 789999999999987655433222 3457899999
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEe
Q 005406 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (698)
Q Consensus 470 ~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ik 549 (698)
+++.++|+| +++...+.+. .|||+++|+.++.||+++++.|++.| .+|||+|||+++++++|.++++||.||+||
T Consensus 352 ~~~~~~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~ 426 (542)
T PRK07786 352 PTVAARVVD-ENMNDVPVGE---VGEIVYRAPTLMSGYWNNPEATAEAF-AGGWFHSGDLVRQDEEGYVWVVDRKKDMII 426 (542)
T ss_pred CCceEEEEC-CCCCCCcCCC---ceEEEEEChhhhhhhcCCHHHHHHHh-hCCcccccceEEEcCCceEEEEecccceEE
Confidence 999999999 5566665554 89999999999999999999999999 689999999999999999999999999999
Q ss_pred cCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHH
Q 005406 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAE 626 (698)
Q Consensus 550 ls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 626 (698)
+ +|++|+|.+||+++.++|.|.+++|++.++ ++.+++++++..... . ...++
T Consensus 427 ~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---------~---------------~~~~~ 481 (542)
T PRK07786 427 S-GGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDA---------A---------------LTLED 481 (542)
T ss_pred e-CCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCC---------C---------------CCHHH
Confidence 6 899999999999999999999999998653 467888888765310 0 01345
Q ss_pred HHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHH
Q 005406 627 MNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAIS 679 (698)
Q Consensus 627 l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~ 679 (698)
+.++++ .+++.|++|..+++++++| +|++||++|++|++.|.+.-.
T Consensus 482 l~~~l~-~~l~~~~~P~~i~~v~~iP------~t~~GKv~r~~L~~~~~~~~~ 527 (542)
T PRK07786 482 LAEFLT-DRLARYKHPKALEIVDALP------RNPAGKVLKTELRERYGACVN 527 (542)
T ss_pred HHHHHH-hhccCCCCCCEEEEeccCC------CCCcccccHHHHHHHHHhhhc
Confidence 566664 6799999999999999999 999999999999999987543
No 65
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.2e-67 Score=702.09 Aligned_cols=550 Identities=17% Similarity=0.230 Sum_probs=447.3
Q ss_pred chHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHH
Q 005406 3 DSSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLH 82 (698)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~ 82 (698)
+..|+++|.++|.++.++|+.+++++++........ +..... ...++.+...+++
T Consensus 4500 ~~~l~~~f~~~L~~l~~~p~~~~~~l~~~~~~~~~~-------------------~~~~~~------~~~~~~~~~~~~~ 4554 (5163)
T PRK12316 4500 IERLARHLTNLLEAMAEDPQRRLGELQLLEKAEQQR-------------------IVALWN------RTDAGYPATRCVH 4554 (5163)
T ss_pred HHHHHHHHHHHHHHHhhCcccchhhhccCCHHHHHH-------------------HHhccC------CCCcCCCccccHH
Confidence 457899999999999999999999999876542100 000000 0011223457899
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcC
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYS 162 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G 162 (698)
++|+++++++||++|+.+. + +.+||+||.++++++|++|.+.|+++|++|+|+++|+++|++++|||+++|
T Consensus 4555 ~l~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lavl~aG 4625 (5163)
T PRK12316 4555 QLVAERARMTPDAVAVVFD---E------EKLTYAELNRRANRLAHALIARGVGPEVLVGIAMERSAEMMVGLLAVLKAG 4625 (5163)
T ss_pred HHHHHHHHhCCCCeEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 9999999999999999764 2 459999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhc
Q 005406 163 YISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQ 242 (698)
Q Consensus 163 ~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (698)
++++|++|.++.+++.+++++++++++|++......+. ...... ++.++... ++ .
T Consensus 4626 ~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~----~~~~~~-~~~~~~~~------------------~~--~ 4680 (5163)
T PRK12316 4626 GAYVPLDPEYPRERLAYMMEDSGAALLLTQSHLLQRLP----IPDGLA-SLALDRDE------------------DW--E 4680 (5163)
T ss_pred cEEecCCCCChHHHHHHHHHhcCCCEEEechhhhhhcc----cccCcc-eEeecchh------------------hc--c
Confidence 99999999999999999999999999999876543321 111111 11111100 00 0
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhC
Q 005406 243 GCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYG 322 (698)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G 322 (698)
......+.....+++++||+|||||||.||||+++|+++++.+.+....++++++|++++++|++|+.+....+.+++.|
T Consensus 4681 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G 4760 (5163)
T PRK12316 4681 GFPAHDPAVRLHPDNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGERYELTPDDRVLQFMSFSFDGSHEGLYHPLING 4760 (5163)
T ss_pred cCCccCCccCCCCCceEEEEECCCCCCCCCEeeeccHHHHHHHHHHHHhcCCCcCCeEEEecCcchhhHHHHHHHHHhCC
Confidence 00111223345789999999999999999999999999999998888889999999999999999999998899999999
Q ss_pred cEEEEeCC---ChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHH
Q 005406 323 VAVGFYQG---DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (698)
Q Consensus 323 ~~~~~~~~---~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (698)
+++++.+. ++..+++.|+++++|+++++|++++.+.+.....
T Consensus 4761 ~~lvi~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~----------------------------------- 4805 (5163)
T PRK12316 4761 ASVVIRDDSLWDPERLYAEIHEHRVTVLVFPPVYLQQLAEHAERD----------------------------------- 4805 (5163)
T ss_pred CEEEEcCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhhhccc-----------------------------------
Confidence 99999872 7899999999999999999999999887632110
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCC-----CCCCCccCCCCCcE
Q 005406 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD-----NLSGHVGSPNPACE 473 (698)
Q Consensus 400 ~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~-----~~~~~vG~p~~~~~ 473 (698)
...+++|.+++|||++++++.+.+.+.+ +++++|+||+||++++++...... ....++|+|+++++
T Consensus 4806 --------~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 4877 (5163)
T PRK12316 4806 --------GEPPSLRVYCFGGEAVAQASYDLAWRALKPVYLFNGYGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNRS 4877 (5163)
T ss_pred --------cCCCCccEEEEecccCCHHHHHHHHHhCCCCEEEecccCccceEEEEEEEcccccccCCCCCcccccccCCE
Confidence 0115899999999999999997776554 789999999999998766544322 34568999999999
Q ss_pred EEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccC-------CCceecCcEEEEecCCcEEEEccCCC
Q 005406 474 IKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG-------DGWLHTGDIGLWLPGGRLKIIDRKKN 546 (698)
Q Consensus 474 v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~-------~gw~~TGDlg~~~~~G~l~i~GR~~d 546 (698)
++|+| +++..++.|. .|||+|+|+++++|||++|+.|+++|.. ++||+|||+|+++++|.++|+||+|+
T Consensus 4878 ~~i~d-~~~~~~p~g~---~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~ 4953 (5163)
T PRK12316 4878 GYVLD-GQLNPLPVGV---AGELYLGGEGVARGYLERPALTAERFVPDPFGAPGGRLYRTGDLARYRADGVIDYLGRVDH 4953 (5163)
T ss_pred EEEEC-CCCCcCCCCC---CceEEECCcccchhhcCChhhhhhhccCCCCCCCCcceeecCceeEECCCCcEEEeccccc
Confidence 99999 5566666665 8999999999999999999999999843 46999999999999999999999999
Q ss_pred eEecCCceeecchHHHHHHhcCcCceeEEEEEcCC--CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHH
Q 005406 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF--NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVL 624 (698)
Q Consensus 547 ~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~--~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 624 (698)
+||+ +|++|+|.|||++|.+||+|.+|+|++.++ ++.++|+|++...... ...+....+.
T Consensus 4954 ~iki-~G~ri~~~eIE~~l~~~p~V~~a~v~~~~~~~~~~l~a~v~~~~~~~~-----------------~~~~~~~~~~ 5015 (5163)
T PRK12316 4954 QVKI-RGFRIELGEIEARLREHPAVREAVVIAQEGAVGKQLVGYVVPQDPALA-----------------DADEAQAELR 5015 (5163)
T ss_pred eEee-ccEeecHHHHHHHHHhCCCcceEEEEEeeCCCCcEEEEEEeCCccccc-----------------cccccchhhH
Confidence 9998 899999999999999999999999998543 5689999998763210 1112233456
Q ss_pred HHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHHHHHh
Q 005406 625 AEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAISNMYA 683 (698)
Q Consensus 625 ~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~~ly~ 683 (698)
++|++.++ ..||.|++|..+++++++| +|++||++|++|.+.+.+.+++.|.
T Consensus 5016 ~~l~~~l~-~~lp~y~vP~~~~~~~~lP------~t~~GKvdR~~L~~~~~~~~~~~~~ 5067 (5163)
T PRK12316 5016 DELKAALR-ERLPEYMVPAHLVFLARMP------LTPNGKLDRKALPQPDASLLQQAYV 5067 (5163)
T ss_pred HHHHHHHh-ccCchhhCCcceeecccCC------CCCCcccChhhcCCccccccccccC
Confidence 77788775 8999999999999999999 9999999999999888776666554
No 66
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.2e-65 Score=574.87 Aligned_cols=503 Identities=22% Similarity=0.264 Sum_probs=407.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|++++|++.++++||++|+.+. +. .++.+.+||.||.++++++|++|.++|+++|++|+|+++|+.+|+++++
T Consensus 5 ~~~~l~~~~~~~a~~~p~~~a~~~~---~~-~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~l 80 (517)
T PRK08008 5 GGQHLRQMWDDLADVYGHKTALIFE---SS-GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWF 80 (517)
T ss_pred ccccHHHHHHHHHHHCCCceEEEcc---cC-CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4578999999999999999999875 32 2345789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcC-CceeEEEEeCCCCCCCCCCCCCCCceEee
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEI-PSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (698)
||+++|++++|+++.++.+++.+++++++++++|++.+....+.+..... ..++.++..+...... ....+
T Consensus 81 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 152 (517)
T PRK08008 81 GLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPAD--------DGVSS 152 (517)
T ss_pred HHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCccc--------ccccC
Confidence 99999999999999999999999999999999999988776665554432 3345555554321110 11234
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-
Q 005406 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN- 314 (698)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~- 314 (698)
++++............+..++++++|+|||||||.||||++||+++............+..++++++.+|++|..+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 232 (517)
T PRK08008 153 FTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTA 232 (517)
T ss_pred HHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHH
Confidence 5554433221111223446789999999999999999999999999865433333345778999999999999877665
Q ss_pred HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCC
Q 005406 315 QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTP 393 (698)
Q Consensus 315 ~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~ 393 (698)
.+.++..|+++++.+ .++..+++.++++++|++.++|.++..+.......
T Consensus 233 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----------------------------- 283 (517)
T PRK08008 233 AMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSA----------------------------- 283 (517)
T ss_pred HHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcc-----------------------------
Confidence 667888999999887 68999999999999999999999988776421000
Q ss_pred chhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCCCccCCCCCc
Q 005406 394 SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPAC 472 (698)
Q Consensus 394 ~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~ 472 (698)
. .....++.+.++ .+++++....|.+.+|+++++.||+||+++.++...+. ....+++|.|++++
T Consensus 284 ~-------------~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~ 349 (517)
T PRK08008 284 N-------------DRQHCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCY 349 (517)
T ss_pred c-------------cccccceeeEEe-cCCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCccccCCCCc
Confidence 0 000357777665 47899999888888899999999999998655544332 24467899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeC---CCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEe
Q 005406 473 EIKLVDVPEMNYTSEDQPHPRGEICVRG---PIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (698)
Q Consensus 473 ~v~i~d~~~~~~~~~~~~~~~GEl~v~g---~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ik 549 (698)
+++|+| +++..++.+. .|||+++| ++++.|||++++.|++.|+.+|||+|||+|++|++|.++++||.||+||
T Consensus 350 ~~~i~d-~~~~~~~~g~---~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~ 425 (517)
T PRK08008 350 EAEIRD-DHNRPLPAGE---IGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIK 425 (517)
T ss_pred EEEEEC-CCCCCCCCCC---cceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEE
Confidence 999999 5566666655 89999998 6899999999999999998899999999999999999999999999999
Q ss_pred cCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHH
Q 005406 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAE 626 (698)
Q Consensus 550 ls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 626 (698)
+ +|++|+|.+||+++.++|.|.+++|+|.++ ++.++++|+++++. ..+ .++
T Consensus 426 ~-~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~~--------~~~-----------------~~~ 479 (517)
T PRK08008 426 R-GGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGE--------TLS-----------------EEE 479 (517)
T ss_pred e-CCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCCC--------CCC-----------------HHH
Confidence 6 799999999999999999999999999654 46789999987632 011 345
Q ss_pred HHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHH
Q 005406 627 MNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAK 671 (698)
Q Consensus 627 l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~ 671 (698)
|.++++ .+|+.|++|..+++++++| +|++||++|+.|+
T Consensus 480 l~~~~~-~~l~~~~~P~~~~~v~~iP------~t~~gK~~r~~l~ 517 (517)
T PRK08008 480 FFAFCE-QNMAKFKVPSYLEIRKDLP------RNCSGKIIKKNLK 517 (517)
T ss_pred HHHHHH-hhcccccCCcEEEEeccCC------CCCccceehhhcC
Confidence 666665 6799999999999999999 9999999999864
No 67
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=2.2e-65 Score=571.09 Aligned_cols=495 Identities=26% Similarity=0.375 Sum_probs=408.6
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
.++.+++..++ .+|++.|+... + .+.+||+||.+++.++|++|++.|+++|++|+++++|+++++++++||
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~---~-----~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~ 73 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETP---D-----GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLAT 73 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeC---C-----CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 46899999999 99999998653 2 256999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHH
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (698)
+++|++++|+++.++.+++..+++.+++++++++......+....... ....++.++.... ..+.+
T Consensus 74 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------~~~~~ 139 (504)
T PRK07514 74 LRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAA-GAPHVETLDADGT-------------GSLLE 139 (504)
T ss_pred HHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhcc-CCceEEEecCCCc-------------ccHHH
Confidence 999999999999999999999999999999999987766555443322 2222333332110 11122
Q ss_pred HHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-HHH
Q 005406 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIV 317 (698)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~ 317 (698)
..... ..........++++++|+|||||||.||+|++||+++...+......+++.++|++++.+|++|..++.. .+.
T Consensus 140 ~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 218 (504)
T PRK07514 140 AAAAA-PDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNV 218 (504)
T ss_pred hhhhc-CcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHH
Confidence 11111 1111223456899999999999999999999999999998877777788899999999999999999876 567
Q ss_pred HHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchh
Q 005406 318 SVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKM 396 (698)
Q Consensus 318 ~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~ 396 (698)
+++.|+++++.+ .++..+++.+ .++|++.++|.++..+.....
T Consensus 219 ~l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~---------------------------------- 262 (504)
T PRK07514 219 ALLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPR---------------------------------- 262 (504)
T ss_pred HHhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCC----------------------------------
Confidence 899999999887 6888999988 479999999999988765200
Q ss_pred hHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEE
Q 005406 397 WDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKL 476 (698)
Q Consensus 397 ~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i 476 (698)
......+++|.+++||+++++++.+.|...+++++++.||+||++.............+++|.|+++++++|
T Consensus 263 --------~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~~~~v~i 334 (504)
T PRK07514 263 --------LTREAAAHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNTSNPYDGERRAGTVGFPLPGVSLRV 334 (504)
T ss_pred --------CCcccccceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccccCCccccccCcccccCCCCcEEEE
Confidence 000111589999999999999999999998999999999999998655543333345678999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceee
Q 005406 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYV 556 (698)
Q Consensus 477 ~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v 556 (698)
+|++++..++.+. .|||+++|++++.||+++++.+++.|..+|||+|||+|+++++|.++++||+||+||+ +|++|
T Consensus 335 ~d~~~~~~~~~g~---~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~-~G~~i 410 (504)
T PRK07514 335 TDPETGAELPPGE---IGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIIS-GGYNV 410 (504)
T ss_pred EECCCCCCCCCCC---ceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEe-CCeEE
Confidence 9977777666665 8999999999999999999999999988999999999999999999999999999996 89999
Q ss_pred cchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHh
Q 005406 557 APEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKE 633 (698)
Q Consensus 557 ~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 633 (698)
+|.+||+++.++++|.+++|++.++ ++.+++++++.+.. ..+ .+++++.++
T Consensus 411 ~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~--------~~~-----------------~~~l~~~~~- 464 (504)
T PRK07514 411 YPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGA--------ALD-----------------EAAILAALK- 464 (504)
T ss_pred CHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCC--------CCC-----------------HHHHHHHHH-
Confidence 9999999999999999999999654 46788999887532 001 244555554
Q ss_pred CCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 634 GQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 634 ~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
.+|+.+++|+.|++++++| +|++||++|++|+++|++.
T Consensus 465 ~~l~~~~~p~~i~~v~~~p------~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 465 GRLARFKQPKRVFFVDELP------RNTMGKVQKNLLREQYADL 502 (504)
T ss_pred hhcccCCCCcEEEEeccCC------CCCCcceeHHHHHHHHHhh
Confidence 6789999999999999999 9999999999999988754
No 68
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.9e-66 Score=586.64 Aligned_cols=503 Identities=18% Similarity=0.247 Sum_probs=383.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|+++++++|+++|+.+....+...+..+.+||+||.++++++|++|.+. +++||+|+++++|+++|+++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 457899999999999999999977511011113356799999999999999999986 9999999999999999999999
Q ss_pred HHHhcCCeEEec-CCCCC--HHHHHHHHhhccceEEEecccchHHHHhhhhcCCce--eEEEEeCCCCCCCCCCCCCCCc
Q 005406 157 ACSAYSYISVPL-YDTLG--PDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSV--HLIVVVGGKDEHLPSLPSTSGV 231 (698)
Q Consensus 157 A~~~~G~~~vpl-~~~~~--~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~ii~~~~~~~~~~~~~~~~~~ 231 (698)
||+++|++++|+ ++.++ .+++.+++++++++++|++......+......++.. ..++.++....
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------- 179 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPD----------- 179 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccc-----------
Confidence 999999999999 57776 789999999999999999887666554443333321 23343332110
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccc-cCCCcEEEEcCChhhHH
Q 005406 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ-FYPSDIYMSYLPLAHIY 310 (698)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~h~~ 310 (698)
.. ..........++++++|+|||||||.||||++||+++.+.+......++ +.+++++++++|++|.+
T Consensus 180 ----------~~-~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~ 248 (612)
T PRK12476 180 ----------SA-GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDM 248 (612)
T ss_pred ----------cc-cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCccccc
Confidence 00 0011112346789999999999999999999999999887766555566 78899999999999999
Q ss_pred HHHHHHHHHHhCcEEEEeC-----CChhhHHHHHh--hhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 005406 311 ERANQIVSVYYGVAVGFYQ-----GDNLKLMDDLA--VLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSK 383 (698)
Q Consensus 311 ~~~~~~~~l~~G~~~~~~~-----~~~~~l~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k 383 (698)
++...+.+++.|++.++.. .++..+++.++ ++++|.++.+|.++..+....... ..
T Consensus 249 g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~--~~--------------- 311 (612)
T PRK12476 249 GLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLP--AE--------------- 311 (612)
T ss_pred chHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcCh--hh---------------
Confidence 9987666666666666554 27889999995 589999999999988776521000 00
Q ss_pred HHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh---CC---ceecccCcchhcchhcccCC
Q 005406 384 KQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF---GC---QVMEGYGMTETSCIISAIDK 457 (698)
Q Consensus 384 ~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~---g~---~l~~~YG~TE~~~~~~~~~~ 457 (698)
...++ .+++| +++||+++++++.+.|.+.| |+ .+++.||+||++..++...+
T Consensus 312 ----------~~~~~-----------l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~ 369 (612)
T PRK12476 312 ----------GDDID-----------LSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAP 369 (612)
T ss_pred ----------hcCcc-----------hhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCC
Confidence 00000 14789 99999999999999998877 44 49999999998765443222
Q ss_pred CC---------------------------CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCC
Q 005406 458 GD---------------------------NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKN 510 (698)
Q Consensus 458 ~~---------------------------~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~ 510 (698)
.. ...+++|+|+++++++|+|.+++..++.++ .||||++|++++.|||++
T Consensus 370 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~---~GEl~v~g~~v~~GY~~~ 446 (612)
T PRK12476 370 DAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGE---VGEIWLHGDNIGRGYWGR 446 (612)
T ss_pred CCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCC---EEEEEEcCCcccccccCC
Confidence 11 113579999999999999955467666555 899999999999999999
Q ss_pred hhhhccccc------------------CCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHh-cCcCc
Q 005406 511 EVQTREVID------------------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYA-KCKFV 571 (698)
Q Consensus 511 ~~~t~~~f~------------------~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~-~~p~V 571 (698)
|+.|++.|. .++||+|||+|+++ ||+|+|+||+||+||+ +|++|+|.|||+++. .||.|
T Consensus 447 ~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~~-dG~l~i~GR~~d~I~~-~G~~I~p~eIE~~l~~~~p~V 524 (612)
T PRK12476 447 PEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVYL-DGELYITGRIADLIVI-DGRNHYPQDIEATVAEASPMV 524 (612)
T ss_pred hHHHHHHHhhhhccccccccccccccCCCCeeeccccceeE-CCEEEEEeccCcEEEE-CCcccCHHHHHHHHHHhcccc
Confidence 999999884 23599999999985 9999999999999997 899999999999997 58999
Q ss_pred ee--EEEEEcCC--CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcce-eeEEE
Q 005406 572 LQ--CFIYGDSF--NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEY-AKAVT 646 (698)
Q Consensus 572 ~~--~~V~g~~~--~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~-p~~i~ 646 (698)
.+ ++|++.++ ++.++++|++.+.... . +. +.+.+.+++.+.. .|++ |+.+.
T Consensus 525 ~~~~v~v~~~~~~~~~~~~~~v~~~~~~~~-------~---------~~----~~l~~~~~~~l~~----~~~~~p~~v~ 580 (612)
T PRK12476 525 RRGYVTAFTVPAEDNERLVIVAERAAGTSR-------A---------DP----APAIDAIRAAVSR----RHGLAVADVR 580 (612)
T ss_pred cCCcEEEEEecCCCcceEEEEEEecCCccc-------c---------cH----HHHHHHHHHHHHH----hhCCcceEEE
Confidence 99 66677543 5788888887653100 0 01 1223334433321 3555 67888
Q ss_pred Eec--CCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 647 LMP--EPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 647 ~~~--~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
+++ ++| +|++||++|++|++.|.+
T Consensus 581 ~v~~~~lP------~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 581 LVPAGAIP------RTTSGKLARRACRAQYLD 606 (612)
T ss_pred EECCCCcC------cCCchHHHHHHHHHHHHc
Confidence 887 599 999999999999998753
No 69
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-65 Score=587.79 Aligned_cols=515 Identities=18% Similarity=0.151 Sum_probs=391.9
Q ss_pred HHHHHHHHHhCCCCCceEEEeecCCc--cCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005406 82 HDNFIYAVENYPDYKYLGTRVRVDGT--VGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (698)
Q Consensus 82 ~~~l~~~a~~~pd~~al~~~~~~~~~--~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~ 159 (698)
..+|.++++++||++|+++. +.. .++.+.+||+||.+++.++|++|+++|+++||+|+++++|++|+++++|||+
T Consensus 178 ~~~l~~~~~~~pd~~Ai~~~---~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~ 254 (728)
T PLN03052 178 ECCLTPKPSKTDDSIAIIWR---DEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAII 254 (728)
T ss_pred HHHHHHHhccCCCCeEEEEE---CCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 34566666678999999886 321 1235789999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHhhccceEEEecccch------HHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceE
Q 005406 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL------NTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKL 233 (698)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~------~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 233 (698)
++|++++|+++.++.+++.+++++++++++|+++... +....+..... ..++++........... ....
T Consensus 255 ~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~--~~~iv~~~~~~~~~~~~---~~~~ 329 (728)
T PLN03052 255 LAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKA--PKAIVLPADGKSVRVKL---REGD 329 (728)
T ss_pred HcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcC--CcEEEEeCCCCcccccc---ccCC
Confidence 9999999999999999999999999999999986432 11111111111 12333322110000000 0012
Q ss_pred eeHHHHHhcCCCC----CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhH
Q 005406 234 ISYLQLQSQGCSS----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHI 309 (698)
Q Consensus 234 ~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 309 (698)
.+|++++...... ..+.....++++++|+|||||||.||||+++|.+++..+......+++.++|++++++|++|+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l~w~ 409 (728)
T PLN03052 330 MSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWM 409 (728)
T ss_pred ccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCcHHH
Confidence 4677776543111 111122356899999999999999999999999987766555555788999999999999999
Q ss_pred HHHHHHHHHHHhCcEEEEeCC--ChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHH
Q 005406 310 YERANQIVSVYYGVAVGFYQG--DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAI 387 (698)
Q Consensus 310 ~~~~~~~~~l~~G~~~~~~~~--~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~ 387 (698)
++....+.+|+.|++++++++ ++..+++.++++++|++.++|+++..+.+....
T Consensus 410 ~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~------------------------ 465 (728)
T PLN03052 410 MGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCM------------------------ 465 (728)
T ss_pred hHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCc------------------------
Confidence 998778899999999999984 557799999999999999999999887652100
Q ss_pred HcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC-CceecccCcchhcchhcccCC-CCCCCCCc
Q 005406 388 VSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCIISAIDK-GDNLSGHV 465 (698)
Q Consensus 388 ~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~-~~~~~~~v 465 (698)
.-+| .++||.+++||++++++...++...++ .++++.||+||+++.+....+ .....+++
T Consensus 466 -------~~~d-----------lssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~ 527 (728)
T PLN03052 466 -------AGLD-----------WSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAF 527 (728)
T ss_pred -------ccCC-----------hhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCcc
Confidence 0001 148999999999999999888877665 579999999999765443322 22456889
Q ss_pred cCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCC--ccccccCChhhhccccc------CCCceecCcEEEEecCCc
Q 005406 466 GSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPI--VFQGYYKNEVQTREVID------GDGWLHTGDIGLWLPGGR 537 (698)
Q Consensus 466 G~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~--~~~GY~~~~~~t~~~f~------~~gw~~TGDlg~~~~~G~ 537 (698)
|.|.+|++++|+| ++++.++.+.+ ..|||+++++. ...+|+++. .+...|. +++||+|||+|++|+||+
T Consensus 528 g~p~~g~~v~v~d-~~g~~v~~g~~-~~GEL~v~~~~~~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~ 604 (728)
T PLN03052 528 STPAMGCKLFILD-DSGNPYPDDAP-CTGELALFPLMFGASSTLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGY 604 (728)
T ss_pred ccCCCCceEEEEC-CCCCCCCCCCC-ceEEEEEeCCCCCCCccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCe
Confidence 9999999999999 56666655531 26999998753 345677764 3333331 234999999999999999
Q ss_pred EEEEccCCCeEecCCceeecchHHHHHH-hcCcCceeEEEEEcCC---C-CeEEEEEEcC--hhHHHHHHHHcCCCcccH
Q 005406 538 LKIIDRKKNIFKLAQGEYVAPEKIENVY-AKCKFVLQCFIYGDSF---N-SCLVAIVAVD--PDVLKDWAASQGIKFEDL 610 (698)
Q Consensus 538 l~i~GR~~d~ikls~G~~v~p~eIE~~l-~~~p~V~~~~V~g~~~---~-~~~va~vv~~--~~~~~~~~~~~~~~~~~~ 610 (698)
++|+||.||+||+ +|++|+|.|||+++ ..||.|.+++|+|.++ + +.++++|++. ++. .
T Consensus 605 l~i~GR~Dd~I~~-~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~----------~---- 669 (728)
T PLN03052 605 YRAHGRADDTMNL-GGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGS----------N---- 669 (728)
T ss_pred EEEEecCCCEEee-CCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCC----------C----
Confidence 9999999999997 89999999999999 5899999999999643 2 6799999986 311 0
Q ss_pred HHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHH
Q 005406 611 EQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAI 678 (698)
Q Consensus 611 ~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i 678 (698)
.+.+ ++.+.+++.++ .+|+++.+|+.|++++++| +|++||++|+.|++.+.+..
T Consensus 670 ---~~~~----~L~~~i~~~i~-~~l~~~~~p~~i~~v~~lP------~T~sGKi~Rr~Lr~~~~~~~ 723 (728)
T PLN03052 670 ---PDLN----ELKKIFNSAIQ-KKLNPLFKVSAVVIVPSFP------RTASNKVMRRVLRQQLAQEL 723 (728)
T ss_pred ---CCHH----HHHHHHHHHHH-hhcCCccCCCEEEEcCCCC------CCCchHHHHHHHHHHHHhhh
Confidence 0112 34455555554 6788999999999999999 99999999999999887654
No 70
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-65 Score=575.51 Aligned_cols=506 Identities=25% Similarity=0.352 Sum_probs=417.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|.+.++++|+++|+.+. + +.+||+||.+++.++|..|.+.|+++|++|+++++|+++++++++
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~ 79 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFG---D------RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWL 79 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3578999999999999999999764 2 459999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|+++.++.+++.++++.+++++++++.+....+.+..+.... ..+....... .......+..+
T Consensus 80 a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~ 152 (523)
T PRK08316 80 ACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPV-DTLILSLVLG------GREAPGGWLDF 152 (523)
T ss_pred HHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCc-cceeeeeccc------ccccccchhhH
Confidence 9999999999999999999999999999999999998877666554433331 1111111100 00111233555
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-H
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-Q 315 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~ 315 (698)
+++....... ........+++++|+|||||||.||+|.+||+++.+.+......+++.++|++++.+|++|.+++.. .
T Consensus 153 ~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 231 (523)
T PRK08316 153 ADWAEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFL 231 (523)
T ss_pred HHHHhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHH
Confidence 5555433221 1233457889999999999999999999999999988877777788999999999999999999876 4
Q ss_pred HHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCc
Q 005406 316 IVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPS 394 (698)
Q Consensus 316 ~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~ 394 (698)
+.++..|+++++.+ .++..+++.++++++|++.++|.++..+.+....
T Consensus 232 ~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------------------------------- 280 (523)
T PRK08316 232 GPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDF------------------------------- 280 (523)
T ss_pred HHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCccc-------------------------------
Confidence 45788999999985 7999999999999999999999999877652100
Q ss_pred hhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCC--CCCCCccCCCCC
Q 005406 395 KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGD--NLSGHVGSPNPA 471 (698)
Q Consensus 395 ~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~~~ 471 (698)
+.....++|.+++||++++.++.+.+++.+ ++++++.||+||++.+++.....+ ...+++|+|+++
T Consensus 281 -----------~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~ 349 (523)
T PRK08316 281 -----------DTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLN 349 (523)
T ss_pred -----------ccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCC
Confidence 000114899999999999999999999887 789999999999988766544332 446789999999
Q ss_pred cEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecC
Q 005406 472 CEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLA 551 (698)
Q Consensus 472 ~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls 551 (698)
++++|+| +++...+.+. .|||+++|++++.||+++++.+++.| .+|||+|||+|++++||.++++||.||+||+
T Consensus 350 ~~~~i~~-~~~~~~~~g~---~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~- 423 (523)
T PRK08316 350 VETRVVD-DDGNDVAPGE---VGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWFHSGDLGVMDEEGYITVVDRKKDMIKT- 423 (523)
T ss_pred cEEEEEc-CCCCCCCCCC---cceEEEECCchhhhhcCCHHHHHHHh-hCCCeeccceEEEcCCceEEEecccccEEEe-
Confidence 9999999 5556566554 89999999999999999999999998 7899999999999999999999999999997
Q ss_pred CceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHH
Q 005406 552 QGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMN 628 (698)
Q Consensus 552 ~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 628 (698)
+|++|+|.+||+.+.++|+|.+++|++.++ ++.++++++++++. ..+ .+.+.
T Consensus 424 ~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~~-----------------~~~l~ 478 (523)
T PRK08316 424 GGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGA--------TVT-----------------EDELI 478 (523)
T ss_pred CCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCC--------CCC-----------------HHHHH
Confidence 899999999999999999999999998653 46788999887632 000 23344
Q ss_pred HHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHH
Q 005406 629 AVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAIS 679 (698)
Q Consensus 629 ~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~ 679 (698)
+.++ .+|+.|++|..+++++++| +|++||++|++|++.|++.++
T Consensus 479 ~~~~-~~l~~~~~p~~i~~v~~~p------~t~~gKi~r~~l~~~~~~~~~ 522 (523)
T PRK08316 479 AHCR-ARLAGFKVPKRVIFVDELP------RNPSGKILKRELRERYAGAFT 522 (523)
T ss_pred HHHH-HhcccCCCCcEEEEecCCC------CCCccceeHHHHHHHHHhhcc
Confidence 4454 5789999999999999999 999999999999999988764
No 71
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-65 Score=578.75 Aligned_cols=506 Identities=23% Similarity=0.357 Sum_probs=399.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCHhHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH-GLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
..++.++|.++++++|+++|+... .+.+||.||.++++++|++|.+. |+++||+|+++++|+++|+++++
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~---------~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~l 93 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNL---------GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVF 93 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecC---------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999998653 14699999999999999999985 99999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeC--CCCCCCC-----------
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVG--GKDEHLP----------- 223 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~--~~~~~~~----------- 223 (698)
||+++|++++|+++.++.+++.++++++++++++++......+....... ....++... +......
T Consensus 94 a~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
T PRK12492 94 GALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT-GIEYLIEAKMGDLLPAAKGWLVNTVVDKV 172 (562)
T ss_pred HHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc-CceEEEeechhhccccccchhcccccccc
Confidence 99999999999999999999999999999999999876544443332221 111111110 0000000
Q ss_pred -C-CCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccc--------
Q 005406 224 -S-LPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ-------- 293 (698)
Q Consensus 224 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~-------- 293 (698)
. ..........+|+++...+...........++++++|+|||||||.||||+++|+++...+......+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~ 252 (562)
T PRK12492 173 KKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQP 252 (562)
T ss_pred cccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccc
Confidence 0 000000112456666554332222233456789999999999999999999999999776654433221
Q ss_pred -cCC-CcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhc
Q 005406 294 -FYP-SDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKAS 368 (698)
Q Consensus 294 -~~~-~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 368 (698)
+.. .+++++.+|++|.+++.. .+..+..|+..++.. .++..+++.++++++|++.++|+++..+......
T Consensus 253 ~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----- 327 (562)
T PRK12492 253 LMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGF----- 327 (562)
T ss_pred cccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCc-----
Confidence 223 357899999999999876 455677888776654 5888999999999999999999999887652100
Q ss_pred chHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchh
Q 005406 369 GTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTET 448 (698)
Q Consensus 369 ~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~ 448 (698)
......++|.+++||+++++++.+.|.+.++++++++||+||+
T Consensus 328 -------------------------------------~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~ 370 (562)
T PRK12492 328 -------------------------------------KDLDFSALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTET 370 (562)
T ss_pred -------------------------------------ccccccceeEEEeccccCCHHHHHHHHHHhCCceeeccCcccc
Confidence 0001148999999999999999999998889999999999999
Q ss_pred cchhcccCCCC-CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecC
Q 005406 449 SCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTG 527 (698)
Q Consensus 449 ~~~~~~~~~~~-~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TG 527 (698)
+.+++...... ...+++|+|+++++++|+| +++..++.+. .|||+++|+.++.|||++++.|.+.|+.+|||+||
T Consensus 371 ~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TG 446 (562)
T PRK12492 371 SPVASTNPYGELARLGTVGIPVPGTALKVID-DDGNELPLGE---RGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTG 446 (562)
T ss_pred CceeeecCCcccccCCccceecCCCEEEEEC-CCCCCCCCCC---ceEEEEeCCccccccccCchhhhhcccCCCceecC
Confidence 87665543322 3457899999999999999 4566665554 89999999999999999999999999888999999
Q ss_pred cEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcC
Q 005406 528 DIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQG 604 (698)
Q Consensus 528 Dlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~ 604 (698)
|+|+++++|.++|.||.||+||+ +|++|+|.+||+++.+||.|.+++|++.++ ++.+++++++.+..
T Consensus 447 D~g~~~~~G~l~i~GR~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------- 516 (562)
T PRK12492 447 DIAVIDPDGFVRIVDRKKDLIIV-SGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPG--------- 516 (562)
T ss_pred cEEEECCCCeEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCC---------
Confidence 99999999999999999999997 799999999999999999999999998653 46788888865421
Q ss_pred CCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHH
Q 005406 605 IKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKER 673 (698)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~ 673 (698)
.+ .++++++++ .+|+.|++|..+.+++++| +|++||++|++|++.
T Consensus 517 ~~-----------------~~~i~~~~~-~~l~~~~~P~~i~~~~~~P------~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 517 LS-----------------VEELKAYCK-ENFTGYKVPKHIVLRDSLP------MTPVGKILRRELRDI 561 (562)
T ss_pred CC-----------------HHHHHHHHH-HhcccccCCcEEEEeccCC------CCCCCceeHHHHHhh
Confidence 00 345666664 6799999999999999999 999999999999864
No 72
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.9e-65 Score=571.73 Aligned_cols=506 Identities=26% Similarity=0.388 Sum_probs=427.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...+++++|.+.++.+|+++|+.+. +. .+||+||+++++++|++|.+.|+++|++|+++++|+++++++++
T Consensus 4 ~~~~l~~~l~~~~~~~p~~~a~~~~---~~------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~l 74 (521)
T PRK06187 4 YPLTIGRILRHGARKHPDKEAVYFD---GR------RTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYF 74 (521)
T ss_pred ccCCHHHHHHHHHHHCCCceEEEeC---Cc------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4578999999999999999999764 32 39999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|+++.++.+++..+++.+++++++++.+....+.+....++.++.++..++.... ........+
T Consensus 75 a~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 148 (521)
T PRK06187 75 AVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAA------PLAPEVGEY 148 (521)
T ss_pred HHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCcccc------ccccccccH
Confidence 99999999999999999999999999999999999998877777777777777777776654321 111233556
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHH
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQI 316 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 316 (698)
.++...... ........++++++++|||||||.||+|.+||+++..........+++.++|++++.+|++|.+++...+
T Consensus 149 ~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 227 (521)
T PRK06187 149 EELLAAASD-TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPY 227 (521)
T ss_pred HHHhhcCCc-cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHH
Confidence 666554322 1223345678999999999999999999999999998888777788999999999999999999998877
Q ss_pred HHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCch
Q 005406 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (698)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (698)
.+++.|+++++.+ .++..+++.++++++|+++++|+++..+.+.....
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~------------------------------- 276 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAY------------------------------- 276 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCC-------------------------------
Confidence 7999999999887 68999999999999999999999999887632110
Q ss_pred hhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCC------CCCCccCCC
Q 005406 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDN------LSGHVGSPN 469 (698)
Q Consensus 396 ~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~------~~~~vG~p~ 469 (698)
.....++|.+++||+++++++.+.+.+.+++++++.||+||+++++........ ..+++|.|+
T Consensus 277 -----------~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 345 (521)
T PRK06187 277 -----------FVDFSSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPL 345 (521)
T ss_pred -----------ccCcchhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccccCCcccccc
Confidence 001148999999999999999999999889999999999999876665544333 567899999
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEe
Q 005406 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (698)
Q Consensus 470 ~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ik 549 (698)
++++++|+| +++..++. .++..|||+++|+.++.||+++++.+.+.| .+|||+|||+|+++++|.+++.||.+|+||
T Consensus 346 ~~~~~~i~~-~~~~~~~~-~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~-~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~ 422 (521)
T PRK06187 346 PGVEARIVD-DDGDELPP-DGGEVGEIIVRGPWLMQGYWNRPEATAETI-DGGWLHTGDVGYIDEDGYLYITDRIKDVII 422 (521)
T ss_pred CCeEEEEEC-CCCCCCCC-CCCCeeEEEEECcchhhhhcCCHHHHHHHh-hCCceeccceEEEcCCCCEEEeecccceEE
Confidence 999999999 45555554 113489999999999999999999999988 578999999999999999999999999999
Q ss_pred cCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHH
Q 005406 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAE 626 (698)
Q Consensus 550 ls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 626 (698)
+ +|.+|+|.+||+++.++++|.+++|++.++ ++.+++++++.+.. ..+ .++
T Consensus 423 ~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~~-----------------~~~ 476 (521)
T PRK06187 423 S-GGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKPGA--------TLD-----------------AKE 476 (521)
T ss_pred c-CCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECCCC--------CCC-----------------HHH
Confidence 7 899999999999999999999999998543 46888998876532 000 233
Q ss_pred HHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 627 MNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 627 l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
+.++++ ..|+.|++|..+++++++| +|++||++|+++++.|++
T Consensus 477 l~~~l~-~~l~~~~~p~~i~~v~~~P------~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 477 LRAFLR-GRLAKFKLPKRIAFVDELP------RTSVGKILKRVLREQYAE 519 (521)
T ss_pred HHHHHH-HhccCCCCceEEEEccCCC------CCCCCCeeHHHHHHHHhc
Confidence 444443 6789999999999999999 999999999999999875
No 73
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.5e-65 Score=571.16 Aligned_cols=497 Identities=22% Similarity=0.297 Sum_probs=412.8
Q ss_pred CHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005406 80 TLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (698)
Q Consensus 80 tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~ 159 (698)
+++++|...++++|+++|+.+. + +.+||+||.+++.++|++|++.|+++|++|+++++|+++++++++||+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~ 71 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH---D------RTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAA 71 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 4789999999999999999763 2 369999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHH
Q 005406 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQL 239 (698)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (698)
++|++++|+++.++.+++..+++.++++++|++......+......++....++.+++..... ........|+++
T Consensus 72 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 146 (515)
T TIGR03098 72 LAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHAS-----EGGGESPSWPKL 146 (515)
T ss_pred hcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCccccc-----CCccccccHHHh
Confidence 999999999999999999999999999999998877666655555556666666665432111 112234566666
Q ss_pred HhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHH
Q 005406 240 QSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSV 319 (698)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l 319 (698)
...... ........+++++|+|||||||.||||++||+++...+......+++..+|++++.+|++|.+++...+.++
T Consensus 147 ~~~~~~--~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l 224 (515)
T TIGR03098 147 LALGDA--DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAF 224 (515)
T ss_pred hccccc--cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHH
Confidence 543322 122334568999999999999999999999999998888777777888999999999999999998888999
Q ss_pred HhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhH
Q 005406 320 YYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWD 398 (698)
Q Consensus 320 ~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d 398 (698)
..|+++++.+ .++..+++.++++++|++.++|+++..+.+...
T Consensus 225 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------------------------ 268 (515)
T TIGR03098 225 YVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW------------------------------------ 268 (515)
T ss_pred HcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc------------------------------------
Confidence 9999999887 689999999999999999999999988764100
Q ss_pred HHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCC-CCCCCCCccCCCCCcEEEE
Q 005406 399 RLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDK-GDNLSGHVGSPNPACEIKL 476 (698)
Q Consensus 399 ~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~~~~~v~i 476 (698)
......++|.+++||+++++++.+.+++.+ ++.+++.||+||++........ .....+++|+|+++++++|
T Consensus 269 -------~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i 341 (515)
T TIGR03098 269 -------PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLV 341 (515)
T ss_pred -------CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcceecCCCEEEE
Confidence 000115899999999999999999999988 7889999999998765443221 1345689999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccC-----------CCceecCcEEEEecCCcEEEEccCC
Q 005406 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG-----------DGWLHTGDIGLWLPGGRLKIIDRKK 545 (698)
Q Consensus 477 ~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~-----------~gw~~TGDlg~~~~~G~l~i~GR~~ 545 (698)
+| +++..++.++ .|||+++|+.++.|||++++.|.+.|.. ++||+|||+|+++++|++++.||.|
T Consensus 342 ~~-~~~~~~~~~~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~ 417 (515)
T TIGR03098 342 LR-EDGSECAPGE---EGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRD 417 (515)
T ss_pred EC-CCCCCCCCCC---ceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccc
Confidence 99 5566665554 8999999999999999999999877643 3489999999999999999999999
Q ss_pred CeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHH
Q 005406 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAA 622 (698)
Q Consensus 546 d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (698)
|+||+ +|++|+|.+||+++.++|.|.+++|++.++ ++.+++++++.+.. ..+
T Consensus 418 d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~--------~~~---------------- 472 (515)
T TIGR03098 418 EMIKT-SGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVTPPGGE--------ELD---------------- 472 (515)
T ss_pred cceec-CCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEEeCCCC--------CCC----------------
Confidence 99997 799999999999999999999999998543 56788888764421 011
Q ss_pred HHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHH
Q 005406 623 VLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKE 672 (698)
Q Consensus 623 i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~ 672 (698)
.++++++++ .+|+.+++|..+++++++| +|++||++|++|++
T Consensus 473 -~~~l~~~l~-~~l~~~~~p~~i~~v~~iP------~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 473 -RAALLAECR-ARLPNYMVPALIHVRQALP------RNANGKIDRKALAA 514 (515)
T ss_pred -HHHHHHHHH-hhCccccCCCEEEEeccCC------CCCCCCCcHHHhcc
Confidence 345666664 6899999999999999999 99999999999864
No 74
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-65 Score=577.15 Aligned_cols=504 Identities=24% Similarity=0.349 Sum_probs=409.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..|++++|.+.++++|+++|+++. +. .+.+||+||.+++.++|.+|.+.|+++|++|+|+++|+++|+++++|
T Consensus 17 ~~~l~~~l~~~~~~~p~~~a~~~~---~~----~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a 89 (558)
T PRK12583 17 TQTIGDAFDATVARFPDREALVVR---HQ----ALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFA 89 (558)
T ss_pred cCcHHHHHHHHHHHCCCCeEEEec---CC----CcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 357999999999999999999774 22 25699999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccch-----HHHHhhhh-------------cCCceeEEEEeCCCC
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFIS-------------EIPSVHLIVVVGGKD 219 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~-----~~~~~~~~-------------~~~~~~~ii~~~~~~ 219 (698)
|+++|++++|+++.++.+++.+++++++++++|++.... ..+.+... ..+.++.++..+...
T Consensus 90 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
T PRK12583 90 TARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP 169 (558)
T ss_pred HHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCC
Confidence 999999999999999999999999999999999976432 11221111 123334444443221
Q ss_pred CCCCCCCCCCCceEeeHHHHHhcCCCC-----CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccccccc
Q 005406 220 EHLPSLPSTSGVKLISYLQLQSQGCSS-----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQF 294 (698)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~ 294 (698)
.. ....|+++...+... ........++++++++|||||||.||||.+||+++.+.+......+++
T Consensus 170 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~ 239 (558)
T PRK12583 170 PP----------GFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGL 239 (558)
T ss_pred Cc----------cccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCC
Confidence 10 123344443322110 011123467899999999999999999999999999888877777888
Q ss_pred CCCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchH
Q 005406 295 YPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTL 371 (698)
Q Consensus 295 ~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 371 (698)
.++|++++.+|++|.++... .+.++..|+++++.. .++..+++.++++++|++.++|+++..+.......
T Consensus 240 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~------- 312 (558)
T PRK12583 240 TEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRG------- 312 (558)
T ss_pred CCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcccccc-------
Confidence 99999999999999999877 567788999988754 68899999999999999999999987665421000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC-CceecccCcchhcc
Q 005406 372 REKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSC 450 (698)
Q Consensus 372 ~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~ 450 (698)
....+++|.+++||+++++++.+++.+.++ ..+++.||+||++.
T Consensus 313 -----------------------------------~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~ 357 (558)
T PRK12583 313 -----------------------------------NFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSP 357 (558)
T ss_pred -----------------------------------CCCchhheEEEecCCCCCHHHHHHHHHHcCCcceecccccccccc
Confidence 000148999999999999999999888776 57999999999998
Q ss_pred hhcccCCC---CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecC
Q 005406 451 IISAIDKG---DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTG 527 (698)
Q Consensus 451 ~~~~~~~~---~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TG 527 (698)
+++..... ....+++|.|++++.++|+|++ +..++.++ .|||+++|+.++.||+++++.+...|+.+|||+||
T Consensus 358 ~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TG 433 (558)
T PRK12583 358 VSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GATVPRGE---IGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTG 433 (558)
T ss_pred ceeccCcccccccccCCCCccCCCCeEEEECCC-CCCCCCCC---eeEEEEEeCccchhhcCChHHHHhhcCCCCCeecc
Confidence 76654322 2356789999999999999954 66666554 89999999999999999999999988889999999
Q ss_pred cEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcC
Q 005406 528 DIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQG 604 (698)
Q Consensus 528 Dlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~ 604 (698)
|+|++++||++++.||.||+||+ +|++|+|.+||+++.++|+|.+++|++.++ ++.+++++++.++. .
T Consensus 434 Dl~~~~~dg~l~i~GR~~~~i~~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~ 504 (558)
T PRK12583 434 DLATMDEQGYVRIVGRSKDMIIR-GGENIYPREIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGH--------A 504 (558)
T ss_pred ceEEECCCccEEEEecccceeEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCC--------C
Confidence 99999999999999999999996 899999999999999999999999998543 46788998876531 0
Q ss_pred CCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 605 IKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
. ..++|+++++ .+|+.|++|..+++++++| +|++||++|++|++++.++
T Consensus 505 ~-----------------~~~~i~~~~~-~~L~~~~~P~~i~~v~~lP------~t~sGK~~r~~L~~~~~~~ 553 (558)
T PRK12583 505 A-----------------SEEELREFCK-ARIAHFKVPRYFRFVDEFP------MTVTGKVQKFRMREISIEE 553 (558)
T ss_pred C-----------------CHHHHHHHHH-hhcccCcCCcEEEEeccCC------CCCCCCccHHHHHHHHHhh
Confidence 0 1345666665 7899999999999999999 9999999999999987654
No 75
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=5e-65 Score=575.42 Aligned_cols=505 Identities=25% Similarity=0.359 Sum_probs=411.9
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..|+.++|.+.++++|+++|+.+. ++ .+.+||+||.+++.++|.+|.+.|+++|++|+++++|+++|++++||
T Consensus 15 ~~~l~~~l~~~~~~~~~~~ai~~~---~~----~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la 87 (559)
T PRK08315 15 EQTIGQLLDRTAARYPDREALVYR---DQ----GLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFA 87 (559)
T ss_pred hccHHHHHHHHHHHCCCCeEEEEc---CC----CeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHH
Confidence 458999999999999999999774 32 25699999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccch-----HHHHhhhhc-------------CCceeEEEEeCCCC
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFISE-------------IPSVHLIVVVGGKD 219 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~-----~~~~~~~~~-------------~~~~~~ii~~~~~~ 219 (698)
|+++|++++|+++.++.+++..+++.+++++++++.... ..+.+.... .+..+.++.++...
T Consensus 88 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (559)
T PRK08315 88 TAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK 167 (559)
T ss_pred HHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC
Confidence 999999999999999999999999999999999986532 112111111 13334444443211
Q ss_pred CCCCCCCCCCCceEeeHHHHHhcCCCC-----CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccccccc
Q 005406 220 EHLPSLPSTSGVKLISYLQLQSQGCSS-----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQF 294 (698)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~ 294 (698)
......+.++....... ........++++++++|||||||.||||.+||+++...+......+++
T Consensus 168 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~ 237 (559)
T PRK08315 168 ----------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKL 237 (559)
T ss_pred ----------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCC
Confidence 11224555554432110 011223467889999999999999999999999999888877777889
Q ss_pred CCCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchH
Q 005406 295 YPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTL 371 (698)
Q Consensus 295 ~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 371 (698)
.++|+++..+|++|.+++.. .+.++..|+++++.. .++..+++.++++++|+++++|+++..+.......
T Consensus 238 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~------- 310 (559)
T PRK08315 238 TEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFA------- 310 (559)
T ss_pred CCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccC-------
Confidence 99999999999999999876 667889999998654 68999999999999999999999997766421000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCc-eecccCcchhcc
Q 005406 372 REKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQ-VMEGYGMTETSC 450 (698)
Q Consensus 372 ~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~-l~~~YG~TE~~~ 450 (698)
....+++|.+++||+++++.+.+.+.+.++.. +++.||+||++.
T Consensus 311 -----------------------------------~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~ 355 (559)
T PRK08315 311 -----------------------------------RFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSP 355 (559)
T ss_pred -----------------------------------CCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEccccccc
Confidence 00114899999999999999999998888654 999999999987
Q ss_pred hhcccCCCC---CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecC
Q 005406 451 IISAIDKGD---NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTG 527 (698)
Q Consensus 451 ~~~~~~~~~---~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TG 527 (698)
+++.....+ ....++|+|+++++++|+|.+++..++.++ .|||+|+|++++.|||++|+.+++.|..++||+||
T Consensus 356 ~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~---~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TG 432 (559)
T PRK08315 356 VSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGE---QGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTG 432 (559)
T ss_pred ceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCC---ceEEEEECchhhhhhcCChhHHhhcCCCCCCEEcc
Confidence 665443322 346789999999999999966577666665 89999999999999999999999999889999999
Q ss_pred cEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcC
Q 005406 528 DIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQG 604 (698)
Q Consensus 528 Dlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~ 604 (698)
|+|+++++|.++|+||.||+||+ +|++|+|.+||+++.++|+|.+++|++.++ ++.++++|++.++. .
T Consensus 433 D~~~~~~dg~~~~~GR~d~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~ 503 (559)
T PRK08315 433 DLAVMDEEGYVNIVGRIKDMIIR-GGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGA--------T 503 (559)
T ss_pred ceEEEcCCceEEEEeeccceEEE-CCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCC--------C
Confidence 99999999999999999999996 899999999999999999999999998654 35788888876531 0
Q ss_pred CCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 605 IKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
.+ .++++++++ ..|+.|++|..|++++++| +|++||++|.+|++++...
T Consensus 504 ~~-----------------~~~l~~~l~-~~l~~~~~P~~i~~v~~lP------~t~~GK~~r~~L~~~~~~~ 552 (559)
T PRK08315 504 LT-----------------EEDVRDFCR-GKIAHYKIPRYIRFVDEFP------MTVTGKIQKFKMREMMIEE 552 (559)
T ss_pred CC-----------------HHHHHHHHH-hhcccccCCcEEEEcccCC------CCCCCceeHHHHHHHHHhh
Confidence 11 334555554 6899999999999999999 9999999999999886653
No 76
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.3e-64 Score=568.09 Aligned_cols=497 Identities=20% Similarity=0.260 Sum_probs=406.8
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..++.++|+++++ ||++|+++. + +.+||+||+++++++|.+|.+.|+++|++|+++++|+++|+++++|
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la 92 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVICG---E------RQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFA 92 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHH
Confidence 3579999988887 999999763 2 3599999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccch-----HHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCce
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 232 (698)
|+++|++++++.+..+..++..+++++++++++++.... ..........+..+.++..+...
T Consensus 93 ~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------------- 159 (536)
T PRK10946 93 LLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDG------------- 159 (536)
T ss_pred HHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCC-------------
Confidence 999999888878778888999999999999999986431 11222223345555555543210
Q ss_pred EeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHH
Q 005406 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (698)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (698)
...+.+++..... ..+.....++++++++|||||||.||||++||+++...+......+++.++|++++.+|++|.+++
T Consensus 160 ~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~ 238 (536)
T PRK10946 160 EHSLDDAINHPAE-DFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPM 238 (536)
T ss_pred CccHHHHhhCccc-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccc
Confidence 1234444433221 122234567999999999999999999999999999998887777889999999999999999887
Q ss_pred HH--HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005406 313 AN--QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (698)
Q Consensus 313 ~~--~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (698)
.. .+.++..|+++++.+ .++..+++.++++++|++.++|.++..+.+.......
T Consensus 239 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~----------------------- 295 (536)
T PRK10946 239 SSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGS----------------------- 295 (536)
T ss_pred hhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCc-----------------------
Confidence 64 577899999998876 7888999999999999999999999888764211000
Q ss_pred CCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCC-CCCCCCCccCC
Q 005406 390 GQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK-GDNLSGHVGSP 468 (698)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p 468 (698)
....+++|.+++||+++++.+.+.+.+.+|+++++.||+||++........ .....+++|+|
T Consensus 296 -----------------~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p 358 (536)
T PRK10946 296 -----------------RAQLASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRP 358 (536)
T ss_pred -----------------cccccceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCccccccccCCcc
Confidence 000148999999999999999999998899999999999997644332221 12345789999
Q ss_pred C-CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCe
Q 005406 469 N-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNI 547 (698)
Q Consensus 469 ~-~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ 547 (698)
+ |+++++|+| ++++.++.++ .|||+++|+.++.|||++++.|.+.|+.+|||+|||+|++|++|+++++||.+|+
T Consensus 359 ~~~~~~v~i~d-~~~~~~~~g~---~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~ 434 (536)
T PRK10946 359 MSPDDEVWVAD-ADGNPLPQGE---VGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQ 434 (536)
T ss_pred cCCCceEEEEC-CCCCCCCCCC---ccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccce
Confidence 9 799999999 5556666554 8999999999999999999999999988999999999999999999999999999
Q ss_pred EecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHH
Q 005406 548 FKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVL 624 (698)
Q Consensus 548 ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 624 (698)
||+ +|++|+|.+||++|.++|+|.+++|++.++ ++.+++++++.+.. + .
T Consensus 435 i~~-~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~~~----------~-----------------~ 486 (536)
T PRK10946 435 INR-GGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKEPL----------K-----------------A 486 (536)
T ss_pred eec-CCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCCCC----------C-----------------H
Confidence 996 899999999999999999999999998654 46788998876521 1 3
Q ss_pred HHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 625 AEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 625 ~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
+++++++++..|+.|++|..+.+++++| +|++||++|++|+++++..
T Consensus 487 ~~l~~~~~~~~l~~~~~P~~~~~~~~iP------~t~~GKv~r~~L~~~~~~~ 533 (536)
T PRK10946 487 VQLRRFLREQGIAEFKLPDRVECVDSLP------LTAVGKVDKKQLRQWLASR 533 (536)
T ss_pred HHHHHHHHhCCccccccCcEEEEeccCC------CCCCCcccHHHHHHHHHhh
Confidence 4566666544699999999999999999 9999999999999987654
No 77
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-64 Score=569.63 Aligned_cols=509 Identities=19% Similarity=0.260 Sum_probs=405.9
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHH
Q 005406 75 HPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIV 154 (698)
Q Consensus 75 ~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~ 154 (698)
.+...++.++|.+.++++|+++|+... .+.+||+||.+++.++|++|.+.|+++|++|+++++|+++|+++
T Consensus 6 ~~~~~~l~~~l~~~a~~~p~~~a~~~~---------~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~ 76 (540)
T PRK06164 6 APRADTLASLLDAHARARPDAVALIDE---------DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVL 76 (540)
T ss_pred ccCCCCHHHHHHHHHHhCCCCeEEecC---------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHH
Confidence 345668999999999999999999642 24599999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccch-----HHHHhhhh-cCCceeEEEEeCCCCCCCCCCCCC
Q 005406 155 DHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTL-----NTLLSFIS-EIPSVHLIVVVGGKDEHLPSLPST 228 (698)
Q Consensus 155 ~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~-----~~~~~~~~-~~~~~~~ii~~~~~~~~~~~~~~~ 228 (698)
++||+++|++++|+++.++.+++.+++++++++++|++.+.. ..+..... ..+.++.++.++..........
T Consensus 77 ~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 154 (540)
T PRK06164 77 FLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPA-- 154 (540)
T ss_pred HHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCC--
Confidence 999999999999999999999999999999999999986642 11211111 1234555555542111111000
Q ss_pred CCceEeeHHHHHhcCCCCCC---CCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCC
Q 005406 229 SGVKLISYLQLQSQGCSSPQ---PFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLP 305 (698)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p 305 (698)
...+.++......... ......++++++++|||||||.||||+++|+++.+.+......+++.+++++++++|
T Consensus 155 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p 230 (540)
T PRK06164 155 ----PGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALP 230 (540)
T ss_pred ----cccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCC
Confidence 0011111110000000 012235689999999999999999999999999998888777788899999999999
Q ss_pred hhhHHHHHHHHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005406 306 LAHIYERANQIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (698)
Q Consensus 306 l~h~~~~~~~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (698)
++|.+++...+.++..|+++++.+ +++..+++.|+++++|+++++|+++..+.+... ..
T Consensus 231 ~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~----~~---------------- 290 (540)
T PRK06164 231 FCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAG----ER---------------- 290 (540)
T ss_pred chhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhc----cc----------------
Confidence 999999988889999999998887 789999999999999999999999998876300 00
Q ss_pred HHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecC-CCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC---C
Q 005406 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGA-SPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD---N 460 (698)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG-~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~---~ 460 (698)
...++++.+..+| ++...++.+++... |+++++.||+||++++++...... .
T Consensus 291 -----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 346 (540)
T PRK06164 291 -----------------------ADFPSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQPATDPVSV 346 (540)
T ss_pred -----------------------CCCcceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccCCCCCCcc
Confidence 0014778776665 56666777777664 899999999999987665543322 2
Q ss_pred CCCCccCCC-CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEE
Q 005406 461 LSGHVGSPN-PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLK 539 (698)
Q Consensus 461 ~~~~vG~p~-~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~ 539 (698)
....+|.|+ ++++++|+|++++..++.++ .|||||+|++++.|||++++.|++.|+.+|||+|||+|++|++|.++
T Consensus 347 ~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~ 423 (540)
T PRK06164 347 RIEGGGRPASPEARVRARDPQDGALLPDGE---SGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFV 423 (540)
T ss_pred eeccCccccCCCeEEEEecCCCCcCCCCCC---eeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcCCceEE
Confidence 234578876 89999999977777666665 89999999999999999999999999889999999999999999999
Q ss_pred EEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC--CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCH
Q 005406 540 IIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF--NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDP 617 (698)
Q Consensus 540 i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~--~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (698)
+.||.||+||+ +|++|+|.+||+++.++|+|.+++|++.+. +..+++++++.++. ..+
T Consensus 424 ~~GR~~~~i~~-~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~vv~~~~~--------~~~----------- 483 (540)
T PRK06164 424 YQTRMGDSLRL-GGFLVNPAEIEHALEALPGVAAAQVVGATRDGKTVPVAFVIPTDGA--------SPD----------- 483 (540)
T ss_pred EEeecCCeEEE-CCEEcCHHHHHHHHHhCCCceeEEEEecCCCCceeEEEEEEeCCCC--------CCC-----------
Confidence 99999999997 899999999999999999999999998542 46789999986532 001
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCccc---CCChHHHHHHHHHHH
Q 005406 618 RARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTF---KIKRPQAKERFAKAI 678 (698)
Q Consensus 618 ~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~G---Ki~R~~l~~~~~~~i 678 (698)
.+++.++++ .+|+.|++|+.|++++++| +|++| |++|++|++.+++..
T Consensus 484 ------~~~l~~~~~-~~l~~~~~P~~i~~~~~~P------~t~~g~~~Ki~r~~L~~~~~~~~ 534 (540)
T PRK06164 484 ------EAGLMAACR-EALAGFKVPARVQVVEAFP------VTESANGAKIQKHRLREMAQARL 534 (540)
T ss_pred ------HHHHHHHHH-hhcccCcCCcEEEEecCCC------CCCCCccccccHHHHHHHHHHhh
Confidence 345555664 6799999999999999999 99999 999999999876543
No 78
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-64 Score=562.74 Aligned_cols=487 Identities=21% Similarity=0.314 Sum_probs=398.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
+.++.++|++.++++|+++|+.+. + +.+||.||.+++.++|.+|.+.|+++|++|+++++|+++|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~---~------~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (497)
T PRK06145 1 MFNLSASIAFHARRTPDRAALVYR---D------QEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFA 71 (497)
T ss_pred CccHHHHHHHHHHHCCCceEEEEC---C------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 357899999999999999999763 2 4599999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHH
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (698)
|+++|++++|+++.++.+++.++++.+++++++++.+...... . ....+.++.... ..+.
T Consensus 72 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-----~--~~~~~~~~~~~~-------------~~~~ 131 (497)
T PRK06145 72 ASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVA-----L--ETPKIVIDAAAQ-------------ADSR 131 (497)
T ss_pred HHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhh-----c--ccceEEecCccc-------------chhH
Confidence 9999999999999999999999999999999999876533211 0 011222222110 0011
Q ss_pred HHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-HH
Q 005406 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QI 316 (698)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~ 316 (698)
.+.... ..........++++++++|||||||.||||++||+++...+......+++..+|+++..+|++|.+++.. .+
T Consensus 132 ~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 210 (497)
T PRK06145 132 RLAQGG-LEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGI 210 (497)
T ss_pred HHhccC-CCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHH
Confidence 111110 1111122356789999999999999999999999999876665555678899999999999999998876 46
Q ss_pred HHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCch
Q 005406 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (698)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (698)
.+++.|+++++.+ .++..+++.++++++|++.++|+++..+.......
T Consensus 211 ~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~------------------------------- 259 (497)
T PRK06145 211 AVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRD------------------------------- 259 (497)
T ss_pred HHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCcc-------------------------------
Confidence 7889999998877 79999999999999999999999998886521000
Q ss_pred hhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCC--CCCCCCccCCCCCc
Q 005406 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG--DNLSGHVGSPNPAC 472 (698)
Q Consensus 396 ~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~ 472 (698)
....+++|.+++||+++++++.+.+.+.+ ++++++.||+||+++.++..... ....+++|.|++++
T Consensus 260 -----------~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~ 328 (497)
T PRK06145 260 -----------RFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHV 328 (497)
T ss_pred -----------ccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCc
Confidence 00014799999999999999999998887 68899999999998765544322 23467899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCC
Q 005406 473 EIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQ 552 (698)
Q Consensus 473 ~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~ 552 (698)
+++++| +++...+.+. .|||+++|++++.||+++++.|++.| .++||+|||+|+++++|+++++||.||+||+ +
T Consensus 329 ~~~i~~-~~~~~~~~~~---~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~-~ 402 (497)
T PRK06145 329 EIRIAD-GAGRWLPPNM---KGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEEGFLYLTDRKKDMIIS-G 402 (497)
T ss_pred eEEEEC-CCCCCCCCCC---ceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCCCcEEEeccccceEEe-C
Confidence 999999 4555555554 89999999999999999999999998 6899999999999999999999999999996 8
Q ss_pred ceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHH
Q 005406 553 GEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNA 629 (698)
Q Consensus 553 G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 629 (698)
|++|+|.+||+++.++|+|.+++|++.++ ++.+++++++.+.. ..+ .++|.+
T Consensus 403 G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~~-----------------~~~l~~ 457 (497)
T PRK06145 403 GENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGA--------TLT-----------------LEALDR 457 (497)
T ss_pred CeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCC--------CCC-----------------HHHHHH
Confidence 99999999999999999999999998654 46789999886531 000 345556
Q ss_pred HHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHH
Q 005406 630 VGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERF 674 (698)
Q Consensus 630 ~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~ 674 (698)
+++ .+|+.|++|..|++++++| +|++||++|++|++++
T Consensus 458 ~~~-~~l~~~~~p~~i~~v~~iP------~t~~GKi~r~~l~~~~ 495 (497)
T PRK06145 458 HCR-QRLASFKVPRQLKVRDELP------RNPSGKVLKRVLRDEL 495 (497)
T ss_pred HHH-HhhhcCCCCCEEEEeccCC------CCCcccccHHHHHHHh
Confidence 664 6789999999999999999 9999999999999865
No 79
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-64 Score=567.06 Aligned_cols=509 Identities=21% Similarity=0.264 Sum_probs=409.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|+.+++++||++++... .+ +..+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~~--~~---~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~l 82 (542)
T PRK06018 8 WPLLCHRIIDHAARIHGNREVVTRS--VE---GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWY 82 (542)
T ss_pred CCCCHHHHHHHHHHhCCCceEEEee--cc---CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHH
Confidence 3569999999999999999999743 12 235779999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|++++++.+++.++++.+++++++++.+....+.+.....+.++.++...+... ... ........+
T Consensus 83 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~ 158 (542)
T PRK06018 83 GIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAH-MPQ---TTLKNAVAY 158 (542)
T ss_pred HHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEeccccc-ccc---cCccccccH
Confidence 9999999999999999999999999999999999998877777666666666666665543211 000 011123456
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHH-HH-HHhcccccccCCCcEEEEcCChhhHHHHHH
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLI-SN-VAGFSLMVQFYPSDIYMSYLPLAHIYERAN 314 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~-~~-~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 314 (698)
.+++..... ........++++++|+|||||||.||||++||++.+ +. .......+++..+|+++..+|++|.+++..
T Consensus 159 ~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~ 237 (542)
T PRK06018 159 EEWIAEADG-DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGI 237 (542)
T ss_pred HHHhccCCc-ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHH
Confidence 666544321 112233467889999999999999999999999743 22 223334577889999999999999999888
Q ss_pred HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005406 315 QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (698)
Q Consensus 315 ~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (698)
.+.++..|+++++.. .++..+++.++++++|++.++|+++..+.+......
T Consensus 238 ~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~--------------------------- 290 (542)
T PRK06018 238 AFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEG--------------------------- 290 (542)
T ss_pred HHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccC---------------------------
Confidence 788899999998864 578899999999999999999999988875321100
Q ss_pred CchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC-----------CC
Q 005406 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD-----------NL 461 (698)
Q Consensus 393 ~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-----------~~ 461 (698)
...+++|.+++||+++++++.++|++ +++++++.||+||++.+++...... ..
T Consensus 291 ---------------~~~~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (542)
T PRK06018 291 ---------------LKLPHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDV 354 (542)
T ss_pred ---------------CCcccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccccCccccccCCchhhhhc
Confidence 00147999999999999999999999 8999999999999987655432111 12
Q ss_pred CCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEE
Q 005406 462 SGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKII 541 (698)
Q Consensus 462 ~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~ 541 (698)
..++|+|.++++++|+| +++...+.+. +..|||+++|++++.|||++ +...++.+|||+|||+|+++++|++++.
T Consensus 355 ~~~~G~~~~g~~i~v~d-~~~~~~~~~~-~~~Gel~i~g~~~~~gy~~~---~~~~~~~~~~~~TGDl~~~~~~g~~~~~ 429 (542)
T PRK06018 355 LQKQGYPPFGVEMKITD-DAGKELPWDG-KTFGRLKVRGPAVAAAYYRV---DGEILDDDGFFDTGDVATIDAYGYMRIT 429 (542)
T ss_pred cccCCCCCCCcEEEEEC-CCCCCCCCCC-CceeEEEEecCCcchhhhcC---cccEecCCcEEEcCCEEEEcCCccEEEE
Confidence 35789999999999999 4555444321 13799999999999999984 3445668999999999999999999999
Q ss_pred ccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHH
Q 005406 542 DRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPR 618 (698)
Q Consensus 542 GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (698)
||.+|+||+ +|++|+|.+||+++.++|+|.+|+|++.++ ++.++++|++.++. ..+
T Consensus 430 GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~~------------ 488 (542)
T PRK06018 430 DRSKDVIKS-GGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDERPLLIVQLKPGE--------TAT------------ 488 (542)
T ss_pred ecCCCeEEE-CCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCceeEEEEEeCCCC--------CCC------------
Confidence 999999996 899999999999999999999999999654 46788888876532 011
Q ss_pred HHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 619 ARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 619 ~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.+++.++++ .+|+.|++|+.|.+++++| +|++||++|++|++.|.+
T Consensus 489 -----~~~l~~~~~-~~l~~~~~P~~i~~v~~iP------~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 489 -----REEILKYMD-GKIAKWWMPDDVAFVDAIP------HTATGKILKTALREQFKD 534 (542)
T ss_pred -----HHHHHHHHH-hhCccccCCcEEEEeccCC------CCCcchhhHHHHHHHHhc
Confidence 245566664 6799999999999999999 999999999999988755
No 80
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-64 Score=564.44 Aligned_cols=497 Identities=25% Similarity=0.338 Sum_probs=408.2
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|.++++++|+++|+.+. + +.+||.||.+++.++|..|.+.|+++|++|+++++|+++|+++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~l 80 (524)
T PRK06188 10 SGATYGHLLVSALKRYPDRPALVLG---D------TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIG 80 (524)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEEC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3468999999999999999999763 2 459999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEeccc-chHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEee
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ-TLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (698)
||++.|++++|+++.++.+++.++++.++++.++++.. ....+.......+....++.++.... ...
T Consensus 81 a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 148 (524)
T PRK06188 81 AAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPD------------GVD 148 (524)
T ss_pred HHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccc------------hhh
Confidence 99999999999999999999999999999999999876 33444443444455555555443210 001
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHH
Q 005406 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQ 315 (698)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~ 315 (698)
+.+....... ........++++++|+|||||||.||+|+++|.++...+......+++..+|++++.+|++|.+++. .
T Consensus 149 ~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~ 226 (524)
T PRK06188 149 LLAAAAKFGP-APLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-F 226 (524)
T ss_pred HHHhhhccCc-ccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-H
Confidence 1111111101 1111223456799999999999999999999999999888887788899999999999999998875 5
Q ss_pred HHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCc
Q 005406 316 IVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPS 394 (698)
Q Consensus 316 ~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~ 394 (698)
+.+++.|+++++.+ .++..+++.++++++|+++++|+++..+.+.....
T Consensus 227 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~------------------------------ 276 (524)
T PRK06188 227 LPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLR------------------------------ 276 (524)
T ss_pred HHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCcc------------------------------
Confidence 67789999999987 68999999999999999999999998887631100
Q ss_pred hhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC------CCCCCccCC
Q 005406 395 KMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD------NLSGHVGSP 468 (698)
Q Consensus 395 ~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~------~~~~~vG~p 468 (698)
.....++|.+++||++++++....+.+.+++.+++.||+||++..++...... ...+++|+|
T Consensus 277 ------------~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p 344 (524)
T PRK06188 277 ------------TRDLSSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRP 344 (524)
T ss_pred ------------CCCCcceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCceeecCchhccccccccCCccccc
Confidence 00115899999999999999888888888999999999999976555443221 345789999
Q ss_pred CCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeE
Q 005406 469 NPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIF 548 (698)
Q Consensus 469 ~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~i 548 (698)
+++++++|+| +++..++.+. .|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|.++|.||.+++|
T Consensus 345 ~~g~~v~i~~-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~~~i 419 (524)
T PRK06188 345 TPGLRVALLD-EDGREVAQGE---VGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTGDVAREDEDGFYYIVDRKKDMI 419 (524)
T ss_pred cCCcEEEEEc-CCCCCCCCCC---eeEEEEECcchhhhhcCChHHhhhhh-cCCceeecceEEEcCCccEEEEeccccce
Confidence 9999999999 4456555554 89999999999999999999999988 68999999999999999999999999999
Q ss_pred ecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHH
Q 005406 549 KLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLA 625 (698)
Q Consensus 549 kls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 625 (698)
|+ +|++|+|.+||+++.++|+|.+++|++.++ ++.++++++++++.. .+ .+
T Consensus 420 ~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~--------~~-----------------~~ 473 (524)
T PRK06188 420 VT-GGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPGAA--------VD-----------------AA 473 (524)
T ss_pred ec-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCCCC--------CC-----------------HH
Confidence 96 899999999999999999999999998654 467889998875320 00 34
Q ss_pred HHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 626 EMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 626 ~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
+|+++++ ..++.+++|..|++++++| +|++||++|++|++.|.+
T Consensus 474 ~l~~~~~-~~l~~~~~p~~i~~v~~~P------~t~~gKi~r~~L~~~~~~ 517 (524)
T PRK06188 474 ELQAHVK-ERKGSVHAPKQVDFVDSLP------LTALGKPDKKALRARYWE 517 (524)
T ss_pred HHHHHHH-HhcccCCCCcEEEEecCCC------CCccccccHHHHHHHHHh
Confidence 4556664 6789999999999999999 999999999999998854
No 81
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=3.4e-64 Score=568.26 Aligned_cols=517 Identities=21% Similarity=0.260 Sum_probs=400.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..|+++.|.+.+..+|+++|+.+. . +.+||+||.++++++|.+|.+.|+++||+|+++++|+++|+++++|
T Consensus 19 ~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la 89 (567)
T PLN02479 19 ALTPLWFLERAAVVHPTRKSVVHG---S------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFG 89 (567)
T ss_pred ccCHHHHHHHHHhhCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 356899999999999999999653 1 3589999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCC-------ceeEEEEeCCCCCCCCCCCCCCC
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIP-------SVHLIVVVGGKDEHLPSLPSTSG 230 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~-------~~~~ii~~~~~~~~~~~~~~~~~ 230 (698)
|+++|++++|+++.++.+++.+++++++++++|++........+....+. ....++.++..............
T Consensus 90 ~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (567)
T PLN02479 90 VPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALG 169 (567)
T ss_pred HHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccc
Confidence 99999999999999999999999999999999999876655444332211 11234444322111000000011
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHH
Q 005406 231 VKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIY 310 (698)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 310 (698)
.....+.+++...............+++++++|||||||.||||++||+++..........+++..+|++++.+|++|.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~ 249 (567)
T PLN02479 170 KGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCN 249 (567)
T ss_pred cCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhh
Confidence 12345677665432211111123345778899999999999999999999876655444556788899999999999999
Q ss_pred HHHHHHH-HHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHc
Q 005406 311 ERANQIV-SVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVS 389 (698)
Q Consensus 311 ~~~~~~~-~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~ 389 (698)
++...+. .++.|.++++..+++..+++.++++++|++.++|+++..+.+.....
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~------------------------- 304 (567)
T PLN02479 250 GWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSE------------------------- 304 (567)
T ss_pred hHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhc-------------------------
Confidence 9876543 56677777776689999999999999999999999999887631100
Q ss_pred CCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC--------C--
Q 005406 390 GQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG--------D-- 459 (698)
Q Consensus 390 ~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~--------~-- 459 (698)
. ....++++.+++||+++++.+.+.|.+. ++++++.||+||+++.++..... .
T Consensus 305 -----~-----------~~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~ 367 (567)
T PLN02479 305 -----T-----------ILPLPRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQ 367 (567)
T ss_pred -----c-----------cccccceeEEEEcCCCCCHHHHHHHHhc-CCceecccccccccccccceeccccccccCcccc
Confidence 0 0001478999999999999999998875 89999999999986544332100 0
Q ss_pred -CCCCCccCCCCCcE-EEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCc
Q 005406 460 -NLSGHVGSPNPACE-IKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGR 537 (698)
Q Consensus 460 -~~~~~vG~p~~~~~-v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~ 537 (698)
....++|.+.++++ ++|+|.+++..++.+. ++.|||+++|++++.|||++|+.|++.| .+|||+|||+|++|++|+
T Consensus 368 ~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g-~~~GEl~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~ 445 (567)
T PLN02479 368 ARLNARQGVRYIGLEGLDVVDTKTMKPVPADG-KTMGEIVMRGNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGY 445 (567)
T ss_pred cccccccCCCcCCcCceeEEcCCCCcccCCCC-CCceEEEEeccchhhhhhcCcccccchh-cCCceecceeEEEcCCcc
Confidence 11245788888876 8899865666554431 1379999999999999999999999999 689999999999999999
Q ss_pred EEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhh
Q 005406 538 LKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLC 614 (698)
Q Consensus 538 l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~ 614 (698)
++|+||.||+||+ +|++|+|.+||+++..||.|.+++|++.++ ++.+++++++.++...
T Consensus 446 l~~~GR~~d~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~----------------- 507 (567)
T PLN02479 446 IEIKDRSKDIIIS-GGENISSLEVENVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDK----------------- 507 (567)
T ss_pred EEEeccccceEEe-CCEEEcHHHHHHHHHhCcccceeeEEeccchhcCceeEEEEEecCcccc-----------------
Confidence 9999999999996 899999999999999999999999999654 3578999988764200
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 615 NDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 615 ~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.+ .+...++|.++++ .+|+.|++|+.+++ .++| +|++||++|++|++.+..
T Consensus 508 ~~---~~~~~~~l~~~~~-~~l~~~~~P~~~~~-~~iP------~t~~gKv~r~~L~~~~~~ 558 (567)
T PLN02479 508 SD---EAALAEDIMKFCR-ERLPAYWVPKSVVF-GPLP------KTATGKIQKHVLRAKAKE 558 (567)
T ss_pred cc---hhhhHHHHHHHHH-hhcccccCCceEEe-ccCC------CCCccCeeHHHHHHHHHh
Confidence 00 1223456777775 78999999999877 6799 999999999999877554
No 82
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.8e-65 Score=573.11 Aligned_cols=479 Identities=20% Similarity=0.256 Sum_probs=361.8
Q ss_pred HHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHh
Q 005406 81 LHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSA 160 (698)
Q Consensus 81 l~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~ 160 (698)
+.+.|+++++++|+++|+.+. ++ +.++++||+||.++++++|++|.++ ++|++|+|+++|+++|++++|||++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~---~~--~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~ 76 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDR---ES--GLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWL 76 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCC---CC--CcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHH
Confidence 788999999999999999764 22 3468899999999999999999988 7999999999999999999999999
Q ss_pred cCCeEEecCCC--------CCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCce
Q 005406 161 YSYISVPLYDT--------LGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVK 232 (698)
Q Consensus 161 ~G~~~vpl~~~--------~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~ 232 (698)
+|++++ +++. ...+++.+++++++++++|++......+...... +.+.+.
T Consensus 77 ~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-------~~~~~~-------------- 134 (525)
T PRK05851 77 AGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-------VTVHDL-------------- 134 (525)
T ss_pred cCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-------cccccc--------------
Confidence 999865 4432 2235566789999999999987655443322110 000000
Q ss_pred EeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccC-CCcEEEEcCChhhHHH
Q 005406 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFY-PSDIYMSYLPLAHIYE 311 (698)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~-~~d~~l~~~pl~h~~~ 311 (698)
........ ..+.....++++++|+|||||||.||||++||+++.+.+......+++. ++|++++++|++|+++
T Consensus 135 ----~~~~~~~~--~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 208 (525)
T PRK05851 135 ----ATAAHTNR--SASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMG 208 (525)
T ss_pred ----cccccccc--cccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCcc
Confidence 00000000 0011224679999999999999999999999999999888877778888 8999999999999999
Q ss_pred HHHHHHHHHhCcEEEEeC---C--ChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Q 005406 312 RANQIVSVYYGVAVGFYQ---G--DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQA 386 (698)
Q Consensus 312 ~~~~~~~l~~G~~~~~~~---~--~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~ 386 (698)
+...+.+++.|+++++.+ + ++..+++.++++++|++..+|.++..+... ....
T Consensus 209 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~-~~~~--------------------- 266 (525)
T PRK05851 209 LAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKY-ARRV--------------------- 266 (525)
T ss_pred HHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHh-hccc---------------------
Confidence 988888999999999876 2 677899999999999875544444333221 0000
Q ss_pred HHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHH---hCC---ceecccCcchhcchhcccCCC--
Q 005406 387 IVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVC---FGC---QVMEGYGMTETSCIISAIDKG-- 458 (698)
Q Consensus 387 ~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~---~g~---~l~~~YG~TE~~~~~~~~~~~-- 458 (698)
.....+++|.+++||+++++++.++|.+. +|+ .+++.||+||++..++...+.
T Consensus 267 -------------------~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~ 327 (525)
T PRK05851 267 -------------------SDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIG 327 (525)
T ss_pred -------------------cCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCC
Confidence 00001479999999999999999988764 454 499999999998665543221
Q ss_pred -------------CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCcee
Q 005406 459 -------------DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLH 525 (698)
Q Consensus 459 -------------~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~ 525 (698)
....+++|+|++|++++|+|.++...++.+ +.|||+++|++++.|||++|+.+ .+|||+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g---~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~ 399 (525)
T PRK05851 328 LRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGR---EIGEIEIRGASMMSGYLGQAPID-----PDDWFP 399 (525)
T ss_pred ceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCC---CeEEEEEecCchhhccccCCccC-----CCCcee
Confidence 123468999999999999985543444444 48999999999999999998643 578999
Q ss_pred cCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHH
Q 005406 526 TGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAAS 602 (698)
Q Consensus 526 TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~ 602 (698)
|||+|+++ +|.|+|+||+||+||+ +|++|+|.|||++|.+||.|.+|+|++.++ ++.+.++|+.....
T Consensus 400 TGDl~~~~-~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~------- 470 (525)
T PRK05851 400 TGDLGYLV-DGGLVVCGRAKELITV-AGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRG------- 470 (525)
T ss_pred ccceEEEE-CCEEEEEeecCCEEEE-CCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecC-------
Confidence 99999997 8999999999999997 899999999999999999999999987542 34555665543210
Q ss_pred cCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEec--CCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 603 QGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMP--EPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~--~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
. ..+++.+.+.+.+..+ + +++|+.+++++ ++| +|++||++|++|++.++.
T Consensus 471 --~---------~~~~~~~~~~~~l~~~-----l--~~~P~~~~~v~~~~lP------~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 471 --P---------DEAGARSEVVQRVASE-----C--GVVPSDVVFVAPGSLP------RTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred --c---------chHHHHHHHHHHHHHH-----h--CCCccEEEEECCCCcC------cCcchHHHHHHHHHHHHh
Confidence 0 0112222333322221 2 27899999998 899 999999999999987754
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.6e-64 Score=618.33 Aligned_cols=505 Identities=24% Similarity=0.287 Sum_probs=407.5
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005406 76 PEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (698)
Q Consensus 76 ~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~ 155 (698)
+...++.+.|++.++++|+++|+.+. .+ +.+||+||+++++++|++|.+ ++++||+|+++++|++++++++
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~ 682 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADS---TG-----GELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALAN 682 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcC---CC-----CcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHH
Confidence 45678999999999999999999642 12 359999999999999999987 4899999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhh--hcCCceeEEEEeCCCCCCCCCCCCCCCceE
Q 005406 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI--SEIPSVHLIVVVGGKDEHLPSLPSTSGVKL 233 (698)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 233 (698)
+||+++|++++|+++.++.+++.++++++++++++++++....+.+.. ...+....++..++..... . ..
T Consensus 683 la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~ 754 (1146)
T PRK08633 683 LALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKI------S--KV 754 (1146)
T ss_pred HHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhcccc------c--hh
Confidence 999999999999999999999999999999999999877655543211 0122233344443321100 0 00
Q ss_pred eeHHHHHhcCCCC-----CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhh
Q 005406 234 ISYLQLQSQGCSS-----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAH 308 (698)
Q Consensus 234 ~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h 308 (698)
..+.+........ ........++|+++|+|||||||.||||++||+++.+.+......+++.++|++++.+|++|
T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h 834 (1146)
T PRK08633 755 DKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFH 834 (1146)
T ss_pred HHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHH
Confidence 1122221111000 00013456899999999999999999999999999998887777788899999999999999
Q ss_pred HHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Q 005406 309 IYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQ 385 (698)
Q Consensus 309 ~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~ 385 (698)
.+++.. .+.+++.|+++++.+ .++..+++.++++++|++.++|++++.+.+....
T Consensus 835 ~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------------- 892 (1146)
T PRK08633 835 SFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKL---------------------- 892 (1146)
T ss_pred HHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhcccc----------------------
Confidence 999987 678899999998876 5889999999999999999999999887652100
Q ss_pred HHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-------
Q 005406 386 AIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG------- 458 (698)
Q Consensus 386 ~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~------- 458 (698)
.+...+++|.+++||+++++++.+.+++.+|+++++.||+||++++++...+.
T Consensus 893 --------------------~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 952 (1146)
T PRK08633 893 --------------------HPLMFASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVNLPDVLAADFK 952 (1146)
T ss_pred --------------------CcccCCCeeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEecCcccccccc
Confidence 00011589999999999999999999998999999999999998766544321
Q ss_pred ---CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccC---CCceecCcEEEE
Q 005406 459 ---DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG---DGWLHTGDIGLW 532 (698)
Q Consensus 459 ---~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~---~gw~~TGDlg~~ 532 (698)
....+++|+|+|+++++|+|+++++.++.++ .|||+++|++++.||+++|+.|++.|.+ +|||+|||+|++
T Consensus 953 ~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~ 1029 (1146)
T PRK08633 953 RQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGE---DGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHL 1029 (1146)
T ss_pred cccCCCCCCccccCCCCEEEEEcCCCCccCCCCC---ceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEE
Confidence 1246789999999999999977777766655 8999999999999999999999998832 399999999999
Q ss_pred ecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCc--CceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCc
Q 005406 533 LPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCK--FVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKF 607 (698)
Q Consensus 533 ~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p--~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~ 607 (698)
|+||+++++||.||+||+ +|++|+|.|||+++.+|| .+.+++|++.++ ++.+++++++....
T Consensus 1030 ~~~g~l~~~gR~~d~i~~-~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~~~~------------ 1096 (1146)
T PRK08633 1030 DEDGFLTITDRYSRFAKI-GGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCGAED------------ 1096 (1146)
T ss_pred cCCceEEEEecccchhhh-CcEEECHHHHHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecCccC------------
Confidence 999999999999999996 899999999999999999 466789988654 46788888863210
Q ss_pred ccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 608 EDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 608 ~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
.+++++.+++..++.|++|..+++++++| +|++||++|++|++..++.
T Consensus 1097 ----------------~~~l~~~~~~~~l~~~~~P~~i~~~~~iP------~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1097 ----------------VEELKRAIKESGLPNLWKPSRYFKVEALP------LLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred ----------------HHHHHHHHHhcCCCcccCCcEEEEecCcC------CCCCCCCcHHHHHHHHHHh
Confidence 23444444446799999999999999999 9999999999999876543
No 84
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.3e-64 Score=565.64 Aligned_cols=507 Identities=25% Similarity=0.359 Sum_probs=402.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...++.++|...++++|+++|+.+. + +.+||.||+++++++|.+|.+.|+++|++|+++++|+++++++++
T Consensus 21 ~~~~i~~~l~~~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~l 91 (557)
T PRK07059 21 QYPSLADLLEESFRQYADRPAFICM---G------KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIA 91 (557)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEEc---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 3568999999999999999999764 2 459999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCC-CCCCC----------
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDE-HLPSL---------- 225 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-~~~~~---------- 225 (698)
||+++|++++|+++.++.+++.++++++++++++++......+...... ...+.++....... .....
T Consensus 92 a~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (557)
T PRK07059 92 AVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAK-TAVKHVVVASMGDLLGFKGHIVNFVVRRVK 170 (557)
T ss_pred HHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcc-cCCceeEEeccccccccccccccccccccc
Confidence 9999999999999999999999999999999999987665554443332 22333333221100 00000
Q ss_pred ---CCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc----ccc---C
Q 005406 226 ---PSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM----VQF---Y 295 (698)
Q Consensus 226 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~----~~~---~ 295 (698)
........+.+++++..+...........++++++|+|||||||.||||+++|++++..+...... +.. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 250 (557)
T PRK07059 171 KMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRP 250 (557)
T ss_pred ccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCC
Confidence 000001224556665544332233344678999999999999999999999999998765432221 111 1
Q ss_pred CCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHH
Q 005406 296 PSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLR 372 (698)
Q Consensus 296 ~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 372 (698)
..+.+++.+|++|.+++.. .+.++..|++.++.+ .++..+++.++++++|.+.++|.++..+......
T Consensus 251 ~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~--------- 321 (557)
T PRK07059 251 DQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDF--------- 321 (557)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCc---------
Confidence 2457888999999998765 567788888877765 4788999999999999999999999888652100
Q ss_pred HHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchh
Q 005406 373 EKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCII 452 (698)
Q Consensus 373 ~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~ 452 (698)
......++|.++.||+++++.+.+.|.+.+++++++.||+||++.++
T Consensus 322 ---------------------------------~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 368 (557)
T PRK07059 322 ---------------------------------DKLDFSKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVA 368 (557)
T ss_pred ---------------------------------CcCCchhheEEEeccccCCHHHHHHHHHHhCCCeeeccccccccchh
Confidence 00001478999999999999999999988999999999999998876
Q ss_pred cccCCCC-CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEE
Q 005406 453 SAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGL 531 (698)
Q Consensus 453 ~~~~~~~-~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~ 531 (698)
+...... ...+++|.|+++++++|+| +++..++.+. .|||+++|++++.|||++++.|.+.|..+|||+|||+|+
T Consensus 369 ~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~ 444 (557)
T PRK07059 369 TCNPVDATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGE---PGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGV 444 (557)
T ss_pred hcCCCCCCCcCCcccCccCCcEEEEEC-CCCCCCCCCC---ceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEE
Confidence 6543322 3457899999999999998 4556665554 899999999999999999999999998899999999999
Q ss_pred EecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcc
Q 005406 532 WLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFE 608 (698)
Q Consensus 532 ~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~ 608 (698)
++++|.++++||++|+||+ +|++|+|.+||+++.++|+|.+++|++.++ ++.++++|+..... .+
T Consensus 445 ~~~~g~~~~~GR~~~~i~~-~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~---------~~-- 512 (557)
T PRK07059 445 MDERGYTKIVDRKKDMILV-SGFNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPA---------LT-- 512 (557)
T ss_pred EcCCCcEEEecccccceEE-CCEEEcHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCC---------CC--
Confidence 9999999999999999997 799999999999999999999999998543 46788888865421 11
Q ss_pred cHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHH
Q 005406 609 DLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKER 673 (698)
Q Consensus 609 ~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~ 673 (698)
.++++++++ ..|+.+++|..|.+++++| +|++||++|+.|+++
T Consensus 513 ---------------~~~l~~~~~-~~l~~~~~P~~i~~v~~~P------~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 513 ---------------EEDVKAFCK-ERLTNYKRPKFVEFRTELP------KTNVGKILRRELRDG 555 (557)
T ss_pred ---------------HHHHHHHHH-HhcccccCCcEEEEeccCC------CCcccceeHHHHHhh
Confidence 244555554 6799999999999999999 999999999999754
No 85
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-64 Score=559.73 Aligned_cols=491 Identities=19% Similarity=0.256 Sum_probs=390.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCHhHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH-GLQKGVRIGLYLINRPEWLIVD 155 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~e~~~~~ 155 (698)
...++.++|.+.+. ++++++.+. + +++||.||+++++++|++|+++ |++++++|+++++|+++|++++
T Consensus 3 ~~~~~~~~l~~~a~--~~~~a~~~~----~-----~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~ 71 (529)
T PRK07867 3 SAPTVAELLLPLAE--DDDRGLYFE----D-----SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLL 71 (529)
T ss_pred ccccHHHHHHHhcc--cCCceEEEC----C-----cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHH
Confidence 45678999988775 788888653 2 4699999999999999999997 8999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEee
Q 005406 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLIS 235 (698)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (698)
+||+++|++++|+++.++.+++.+++++++++++|++......+.... +... ++..+. ..
T Consensus 72 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~~~~-~~~~~~----------------~~ 131 (529)
T PRK07867 72 GAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---PGVR-VINVDS----------------PA 131 (529)
T ss_pred HHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---cCce-EEEecc----------------cc
Confidence 999999999999999999999999999999999999987655443321 2222 222211 12
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-
Q 005406 236 YLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN- 314 (698)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~- 314 (698)
+.+++..............++++++|+|||||||.||||++||+++..........+++..+|++++.+|++|.+++..
T Consensus 132 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~ 211 (529)
T PRK07867 132 WADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAG 211 (529)
T ss_pred HHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHH
Confidence 3443332211112233457899999999999999999999999999888887777788899999999999999999877
Q ss_pred HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCC
Q 005406 315 QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTP 393 (698)
Q Consensus 315 ~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~ 393 (698)
.+.++..|+++++.+ .++..+++.++++++|++.++|+.+..+......
T Consensus 212 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~------------------------------ 261 (529)
T PRK07867 212 WAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPER------------------------------ 261 (529)
T ss_pred HHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCc------------------------------
Confidence 456788999998876 6899999999999999999999998776542100
Q ss_pred chhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcE
Q 005406 394 SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACE 473 (698)
Q Consensus 394 ~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~ 473 (698)
.. ....++|. ++||+++++.. ..+.+.+|+++++.||+||+++.++.. .....+++|.|+++
T Consensus 262 ~~------------~~~~~lr~-~~gg~~~~~~~-~~~~~~~g~~l~~~YG~TE~~~~~~~~--~~~~~~~~g~~~~~-- 323 (529)
T PRK07867 262 PD------------DADNPLRI-VYGNEGAPGDI-ARFARRFGCVVVDGFGSTEGGVAITRT--PDTPPGALGPLPPG-- 323 (529)
T ss_pred cc------------ccccceEE-EecCCCChHHH-HHHHHHhCCcEEEeecccccccccccC--CCCCCCCcCCCCCC--
Confidence 00 00136774 56888888775 556666899999999999998655432 22345789999999
Q ss_pred EEEEecCCCCCCCCCC---------CCCccEEEE-eCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEcc
Q 005406 474 IKLVDVPEMNYTSEDQ---------PHPRGEICV-RGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDR 543 (698)
Q Consensus 474 v~i~d~~~~~~~~~~~---------~~~~GEl~v-~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR 543 (698)
++++|.+++..++.+. .+..|||++ +|++++.||+++++.+.+.| .+|||+|||+|+++++|.++|+||
T Consensus 324 ~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR 402 (529)
T PRK07867 324 VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM-RGGVYWSGDLAYRDADGYAYFAGR 402 (529)
T ss_pred EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhh-cCCeEeeccEEEEeCCCcEEEecc
Confidence 6778855554443332 011799999 99999999999999999998 689999999999999999999999
Q ss_pred CCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHH
Q 005406 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRAR 620 (698)
Q Consensus 544 ~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (698)
.||+||+ +|++|+|.+||++|.+||+|.+|+|+|.++ ++.+++++++.++. ..+
T Consensus 403 ~~d~i~~-~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~--------~~~-------------- 459 (529)
T PRK07867 403 LGDWMRV-DGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGA--------KFD-------------- 459 (529)
T ss_pred ccCeEEE-CCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCC--------CCC--------------
Confidence 9999997 899999999999999999999999999654 46788888876532 011
Q ss_pred HHHHHHHHHHHHh-CCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHH
Q 005406 621 AAVLAEMNAVGKE-GQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAIS 679 (698)
Q Consensus 621 ~~i~~~l~~~~~~-~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~ 679 (698)
.+++++++++ ..|+.|++|..|++++++| +|++||++|++|+++....-+
T Consensus 460 ---~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP------~t~~GKv~r~~L~~~~~~~~~ 510 (529)
T PRK07867 460 ---PDAFAEFLAAQPDLGPKQWPSYVRVCAELP------RTATFKVLKRQLSAEGVDCAD 510 (529)
T ss_pred ---HHHHHHHHHhhccCCcccCCeEEEEeeccC------CCCCcceeHHHHHHhcCCCCC
Confidence 2334444432 3699999999999999999 999999999999987654433
No 86
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.9e-65 Score=678.90 Aligned_cols=527 Identities=19% Similarity=0.224 Sum_probs=432.2
Q ss_pred hHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHHH
Q 005406 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (698)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (698)
..|+++|.++|.++.++|..+++++++....... + +. .|+ . .+..+...++++
T Consensus 1083 ~~l~~~~~~~l~~~~~~p~~~~~~l~l~~~~~~~-----~---l~------~~~----~---------~~~~~~~~~l~~ 1135 (4334)
T PRK05691 1083 ERLAEHFLALLEQVCEDPQRALGDVQLLDAAERA-----Q---LA------QWG----Q---------APCAPAQAWLPE 1135 (4334)
T ss_pred HHHHHHHHHHHHHHHhCcccchhhhcCCCHHHHH-----H---HH------hcc----C---------CCCCCccCCHHH
Confidence 4688999999999999999999999987644210 0 00 000 0 001123467999
Q ss_pred HHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005406 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (698)
Q Consensus 84 ~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~ 163 (698)
+|+++++++||++|+.+. + +.+||+||+++++++|++|++.|+++|++|+|+++|++++++++|||+++|+
T Consensus 1136 ~~~~~a~~~p~~~Al~~~---~------~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~ 1206 (4334)
T PRK05691 1136 LLNEQARQTPERIALVWD---G------GSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGG 1206 (4334)
T ss_pred HHHHHHHhCCCCeEEEEC---C------ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 999999999999999764 3 3499999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcC
Q 005406 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (698)
Q Consensus 164 ~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (698)
++||++|.++.+++.++++++++++++++......+.. ..... .+.++... ...
T Consensus 1207 ~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~----~~~~~-~~~~~~~~---------------------~~~ 1260 (4334)
T PRK05691 1207 AYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQ----AEGVS-AIALDSLH---------------------LDS 1260 (4334)
T ss_pred EEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhccc----ccCce-EEeecccc---------------------ccc
Confidence 99999999999999999999999999998765433211 11111 11111100 000
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCc
Q 005406 244 CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGV 323 (698)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~ 323 (698)
.....+.....+++++||+|||||||.||||+++|+++.+.+.+....+++.++|+++++.|++|+.++..++.+++.|+
T Consensus 1261 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~ 1340 (4334)
T PRK05691 1261 WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWECFWPLITGC 1340 (4334)
T ss_pred cCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHHHHhCCC
Confidence 00111222346899999999999999999999999999999988888889999999999999999999998999999999
Q ss_pred EEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHH
Q 005406 324 AVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (698)
Q Consensus 324 ~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (698)
++++.+ .++..+++.++++++|++.++|+++..+.+....
T Consensus 1341 ~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~------------------------------------ 1384 (4334)
T PRK05691 1341 RLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLA------------------------------------ 1384 (4334)
T ss_pred EEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCccc------------------------------------
Confidence 999975 5888999999999999999999999887642100
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccC--CCCCCCCCccCCCCCcEEEE
Q 005406 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAID--KGDNLSGHVGSPNPACEIKL 476 (698)
Q Consensus 400 ~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~--~~~~~~~~vG~p~~~~~v~i 476 (698)
...+++|.+++||+++++++.+.|...+ ++.++|.||+||+++.++... ..+...+++|+|+++++++|
T Consensus 1385 --------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i 1456 (4334)
T PRK05691 1385 --------AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRV 1456 (4334)
T ss_pred --------ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEE
Confidence 0015899999999999999999998876 689999999999987665432 22345678999999999999
Q ss_pred EecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhccccc-------CCCceecCcEEEEecCCcEEEEccCCCeEe
Q 005406 477 VDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID-------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (698)
Q Consensus 477 ~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~-------~~gw~~TGDlg~~~~~G~l~i~GR~~d~ik 549 (698)
+| ++++.++.|. .|||+|+|+++++||+++|+.|+++|. +.+||+|||+|++++||.++|+||+|++||
T Consensus 1457 ~d-~~~~~vp~G~---~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qik 1532 (4334)
T PRK05691 1457 LD-AELNLLPPGV---AGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVK 1532 (4334)
T ss_pred EC-CCCCCCCCCC---ceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEE
Confidence 99 5566666665 899999999999999999999999983 235999999999999999999999999999
Q ss_pred cCCceeecchHHHHHHhcCcCceeEEEEEcC--CCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHH
Q 005406 550 LAQGEYVAPEKIENVYAKCKFVLQCFIYGDS--FNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEM 627 (698)
Q Consensus 550 ls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~--~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 627 (698)
+ +|++|+|.|||++|.+||+|.+|+|++.. .+..++|++++..+. .. ..++|
T Consensus 1533 i-~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~~~~~lva~~~~~~~~--------~~-----------------~~~~l 1586 (4334)
T PRK05691 1533 L-RGFRVEPEEIQARLLAQPGVAQAAVLVREGAAGAQLVGYYTGEAGQ--------EA-----------------EAERL 1586 (4334)
T ss_pred E-CCEEcCHHHHHHHHHhCCCcceEEEEEeeCCCCCEEEEEEEeCCCC--------CC-----------------CHHHH
Confidence 8 89999999999999999999999998743 357899999876532 00 02356
Q ss_pred HHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHH
Q 005406 628 NAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKER 673 (698)
Q Consensus 628 ~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~ 673 (698)
+++++ .+||.|++|..|+.++++| +|++||++|++|.+.
T Consensus 1587 ~~~l~-~~Lp~y~vP~~~~~~~~lP------~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1587 KAALA-AELPEYMVPAQLIRLDQMP------LGPSGKLDRRALPEP 1625 (4334)
T ss_pred HHHHH-HhCccccCCcEEEEccccC------CCCCCCcChhhcCcc
Confidence 66665 7899999999999999999 999999999999653
No 87
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-64 Score=560.03 Aligned_cols=473 Identities=21% Similarity=0.282 Sum_probs=383.4
Q ss_pred HHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeE
Q 005406 86 IYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYIS 165 (698)
Q Consensus 86 ~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~ 165 (698)
+.+++.+||++|+.+. .. .+.+||.||.+++.++|.+|.+.|+++|++|+|+++|+++|+++++||+++|+++
T Consensus 2 ~~~a~~~p~~~a~~~~---~~----~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 74 (488)
T PRK09088 2 AFHARLQPQRLAAVDL---AL----GRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIY 74 (488)
T ss_pred chhhhhCCCceEEEec---CC----CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 3567889999998652 11 1469999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCC
Q 005406 166 VPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCS 245 (698)
Q Consensus 166 vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (698)
+|+++.++.+++.+++++++++++|++....... . ....++++......
T Consensus 75 v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~------~-------------------------~~~~~~~~~~~~~~ 123 (488)
T PRK09088 75 VPLNWRLSASELDALLQDAEPRLLLGDDAVAAGR------T-------------------------DVEDLAAFIASADA 123 (488)
T ss_pred EeeCccCCHHHHHHHHHhCCCCEEEEcchhhccc------c-------------------------cccchhhhhhhccc
Confidence 9999999999999999999999999976432110 0 00111222111100
Q ss_pred -CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-HHHHHHhCc
Q 005406 246 -SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIVSVYYGV 323 (698)
Q Consensus 246 -~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~ 323 (698)
.........++++++++|||||||.||+|++||+++...+........+..+|++++.+|++|.+++.. .+.++..|+
T Consensus 124 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~ 203 (488)
T PRK09088 124 LEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGG 203 (488)
T ss_pred cccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCC
Confidence 011122345688999999999999999999999999887776666667788999999999999999887 556788899
Q ss_pred EEEEeC-CChhhHHHHHh--hhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHH
Q 005406 324 AVGFYQ-GDNLKLMDDLA--VLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRL 400 (698)
Q Consensus 324 ~~~~~~-~~~~~l~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~ 400 (698)
++++.+ .++..++..+. ++++|+++++|+++..+.+.... +
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~----------------------------------~-- 247 (488)
T PRK09088 204 SILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGF----------------------------------D-- 247 (488)
T ss_pred EEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCc----------------------------------C--
Confidence 998876 67888888775 48999999999999877642100 0
Q ss_pred HHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCC---CCCCCCCccCCCCCcEEEEE
Q 005406 401 VFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK---GDNLSGHVGSPNPACEIKLV 477 (698)
Q Consensus 401 ~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~---~~~~~~~vG~p~~~~~v~i~ 477 (698)
....+++|.+++||++++....+.+... |+++++.||+||++++...... .....+++|.|.++++++|+
T Consensus 248 ------~~~~~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~ 320 (488)
T PRK09088 248 ------AAALRHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVV 320 (488)
T ss_pred ------ccccccceEEEecCCCCCHHHHHHHHHh-CCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEE
Confidence 0001489999999999999988877764 8999999999999875432211 12356889999999999999
Q ss_pred ecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeec
Q 005406 478 DVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVA 557 (698)
Q Consensus 478 d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~ 557 (698)
| +++..++.+. .|||+++|++++.||+++++.|++.|+.+|||+|||+|++|++|.++|.||.||+||. +|++|+
T Consensus 321 d-~~~~~~~~g~---~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~-~G~~i~ 395 (488)
T PRK09088 321 D-DQGNDCPAGV---PGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFIS-GGENVY 395 (488)
T ss_pred C-CCCCCCcCCC---ceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEe-CCEEEC
Confidence 8 4555555554 8999999999999999999999999988999999999999999999999999999996 899999
Q ss_pred chHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhC
Q 005406 558 PEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEG 634 (698)
Q Consensus 558 p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 634 (698)
|.+||++|.++|.|.+++|++.++ ++..+++|+++++. .. ..+++.+.++ .
T Consensus 396 ~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~--------~~-----------------~~~~l~~~~~-~ 449 (488)
T PRK09088 396 PAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGA--------PL-----------------DLERIRSHLS-T 449 (488)
T ss_pred HHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCC--------CC-----------------CHHHHHHHHH-h
Confidence 999999999999999999999654 46778888876532 00 0244555554 6
Q ss_pred CCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 635 QLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 635 ~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.++.|++|+.|++++++| +|++||++|++|++++.+
T Consensus 450 ~l~~~~~p~~i~~~~~iP------~t~~gKi~r~~l~~~~~~ 485 (488)
T PRK09088 450 RLAKYKVPKHLRLVDALP------RTASGKLQKARLRDALAA 485 (488)
T ss_pred hCcCCCCCCEEEEcccCC------CCCCCceeHHHHHHHHHh
Confidence 789999999999999999 999999999999998865
No 88
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=7.7e-64 Score=558.86 Aligned_cols=496 Identities=23% Similarity=0.314 Sum_probs=410.1
Q ss_pred CCHHHHHHHH-HHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 79 GTLHDNFIYA-VENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 79 ~tl~~~l~~~-a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
.+..+++.++ ++.+||++|+... .+.+||.||.++++++|++|.+.|+++|++|+++++|+++|+++++|
T Consensus 4 ~~~~~~~~~~~~~~~p~~~a~~~~---------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a 74 (508)
T TIGR02262 4 NAAEDLLDRNVVEGRGGKTAFIDD---------ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLG 74 (508)
T ss_pred hHHHHHHHHHHhcccCCceEEEeC---------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 4567777776 6679999998653 24599999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHH
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (698)
|+++|++++|+++.++.+++.++++.+++++++++......+.+....++..+.++..+.... ....+.
T Consensus 75 ~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 143 (508)
T TIGR02262 75 AIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEA-----------GEVQLA 143 (508)
T ss_pred HHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCc-----------ccccHH
Confidence 999999999999999999999999999999999998877776666666677776666543210 112344
Q ss_pred HHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHh-cccccccCCCcEEEEcCChhhHHHHHH-H
Q 005406 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAG-FSLMVQFYPSDIYMSYLPLAHIYERAN-Q 315 (698)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~d~~l~~~pl~h~~~~~~-~ 315 (698)
++...... ........++++++|+|||||||.||||++||+++...+.. ....+++.++|++++.+|++|.+++.. .
T Consensus 144 ~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~ 222 (508)
T TIGR02262 144 ELLATESE-QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNAL 222 (508)
T ss_pred HHhhcCCC-ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHH
Confidence 44432221 12223456789999999999999999999999999887765 344568889999999999999999876 5
Q ss_pred HHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCC
Q 005406 316 IVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTP 393 (698)
Q Consensus 316 ~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~ 393 (698)
+.++..|+++++.+ .++..+++.|++++||++.++|.++..+.+...
T Consensus 223 ~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~------------------------------- 271 (508)
T TIGR02262 223 TFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPN------------------------------- 271 (508)
T ss_pred HHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCcc-------------------------------
Confidence 56788999998876 578999999999999999999998876654200
Q ss_pred chhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcE
Q 005406 394 SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACE 473 (698)
Q Consensus 394 ~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~ 473 (698)
.+...+.++|.+++||+++++++.+.|.+.+|+++++.||+||++.+++.....+...+++|.|+++++
T Consensus 272 -----------~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~ 340 (508)
T TIGR02262 272 -----------LPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGDVRYGTSGKPVPGYR 340 (508)
T ss_pred -----------ccccccccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCceeecCCccCCCCCCcCCCCCCcE
Confidence 000112589999999999999999999998999999999999998765554444455678999999999
Q ss_pred EEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCc
Q 005406 474 IKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQG 553 (698)
Q Consensus 474 v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G 553 (698)
++|+| +++..++.+. .|||+++|++++.||+++++.+++.| .+|||+|||+++++++|.+++.||.||+||+ +|
T Consensus 341 v~i~d-~~~~~~~~g~---~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~-~G 414 (508)
T TIGR02262 341 LRLVG-DGGQDVAAGE---PGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDKYVRNDDGSYTYAGRTDDMLKV-SG 414 (508)
T ss_pred EEEEC-CCCCCCCCCC---eeEEEEecCccccccCCCHHHhHhhh-hcCceeccceEEEcCCccEEEeccccceeee-CC
Confidence 99999 6666666655 89999999999999999999999988 6899999999999999999999999999997 79
Q ss_pred eeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHH
Q 005406 554 EYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAV 630 (698)
Q Consensus 554 ~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 630 (698)
++|+|.+||+.+.++|+|.++++++..+ .+.+.+++++.+... . .+...++|++.
T Consensus 415 ~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~--------------~~~~~~~i~~~ 472 (508)
T TIGR02262 415 IYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQD--------I--------------DTALETELKEH 472 (508)
T ss_pred EEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCc--------c--------------ccccHHHHHHH
Confidence 9999999999999999999999998543 356788888765320 0 01224556666
Q ss_pred HHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHH
Q 005406 631 GKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKE 672 (698)
Q Consensus 631 ~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~ 672 (698)
++ .+|+.|++|..+++++++| +|++||++|++|++
T Consensus 473 ~~-~~l~~~~~p~~i~~~~~iP------~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 473 VK-DRLAPYKYPRWIVFVDDLP------KTATGKIQRFKLRE 507 (508)
T ss_pred HH-HhcccCCCCceEEEecCCC------CCCCCcEehhhccC
Confidence 65 6799999999999999999 99999999999875
No 89
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.1e-64 Score=561.91 Aligned_cols=484 Identities=21% Similarity=0.253 Sum_probs=381.0
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCHhHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGL-QKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~n~~e~~~~~lA 157 (698)
.|+.++|..++ .|+++|+.+. + ..+||.||.++++++|.+|.+.|+ ++|++|+++++|+++|+++++|
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~---~------~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA 71 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG---D------RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAA 71 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHH
Confidence 46888887654 7999999653 2 359999999999999999999999 7999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHH
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYL 237 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 237 (698)
|+++|++++|++|.++.+++.+++++++++++|++.+....+.+.. .+..+.+ .++.. .+.
T Consensus 72 ~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~~~~~~i-~~~~~----------------~~~ 132 (540)
T PRK13388 72 AALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--LPGVRVL-DVDTP----------------AYA 132 (540)
T ss_pred HHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--ccCceEE-Eccch----------------hhh
Confidence 9999999999999999999999999999999999877655443321 2333332 22210 122
Q ss_pred HHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHH-
Q 005406 238 QLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQI- 316 (698)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~- 316 (698)
+++..... ..+.....++++++|+|||||||.||||+++|+++...+......+++.++|++++.+|++|.+++...+
T Consensus 133 ~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~ 211 (540)
T PRK13388 133 ELVAAAGA-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWA 211 (540)
T ss_pred hhhccccC-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHH
Confidence 33221111 1122235679999999999999999999999999998887777778899999999999999999987744
Q ss_pred HHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCch
Q 005406 317 VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (698)
Q Consensus 317 ~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (698)
.++..|+++++.+ .++..+++.++++++|++..+|..+..+...... . .
T Consensus 212 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~-----------------------------~-~ 261 (540)
T PRK13388 212 PAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPER-----------------------------P-D 261 (540)
T ss_pred HHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCC-----------------------------c-c
Confidence 5788999998876 6899999999999999999999988776542000 0 0
Q ss_pred hhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEE
Q 005406 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIK 475 (698)
Q Consensus 396 ~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~ 475 (698)
....+++.+ + |++++++..+.|.+.+++++++.||+||++.+++.. .....+++|+|++++++
T Consensus 262 ------------~~~~~l~~~-~-G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~--~~~~~~~vG~p~~g~~i- 324 (540)
T PRK13388 262 ------------DADNPLRVA-F-GNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVVRE--PGTPPGSIGRGAPGVAI- 324 (540)
T ss_pred ------------ccccceEEE-E-CCCCCHHHHHHHHHHhCCceecccccccccceeecC--CCCCCCCCCCCCCCcEE-
Confidence 000356643 3 556778888888888899999999999998765532 23456789999999764
Q ss_pred EEecCCCCCCC------CC----CCCCccEEEEe-CCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccC
Q 005406 476 LVDVPEMNYTS------ED----QPHPRGEICVR-GPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRK 544 (698)
Q Consensus 476 i~d~~~~~~~~------~~----~~~~~GEl~v~-g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~ 544 (698)
++.+....++ .+ .++..|||+++ |++++.||+++|+.|++.| .+|||+|||+|++|++|.++++||+
T Consensus 325 -~~~~~~~~~~~~~~d~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~-~~g~~~TGD~~~~~~dg~l~i~GR~ 402 (540)
T PRK13388 325 -YNPETLTECAVARFDAHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM-RHGMYWSGDLAYRDADGWIYFAGRT 402 (540)
T ss_pred -EcCCCCccccceeccCccccccCCCcceEEEEecCCcccccccCChHHHHHHh-hcCceeccceEEEcCCCcEEEeccC
Confidence 3322211111 01 12248999998 9999999999999999998 6899999999999999999999999
Q ss_pred CCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHH
Q 005406 545 KNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARA 621 (698)
Q Consensus 545 ~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (698)
||+||+ +|++|+|.+||+++.+||+|.+|+|+|.++ ++.+++++++.++. ..+
T Consensus 403 ~d~i~~-~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~--------~~~--------------- 458 (540)
T PRK13388 403 ADWMRV-DGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALVLRDGA--------TFD--------------- 458 (540)
T ss_pred CceEEE-CCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEEECCCC--------cCC---------------
Confidence 999997 899999999999999999999999999654 45677777776532 011
Q ss_pred HHHHHHHHHHHh-CCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHH
Q 005406 622 AVLAEMNAVGKE-GQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERF 674 (698)
Q Consensus 622 ~i~~~l~~~~~~-~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~ 674 (698)
.++++++++. ..|+.|++|..+++++++| +|++||++|++|++..
T Consensus 459 --~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP------~t~~GKv~R~~L~~~~ 504 (540)
T PRK13388 459 --PDAFAAFLAAQPDLGTKAWPRYVRIAADLP------STATNKVLKRELIAQG 504 (540)
T ss_pred --HHHHHHHHHhhccCCcccCCcEEEEeccCC------CCCcceeeHHhHHHhc
Confidence 2334444432 3699999999999999999 9999999999998864
No 90
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.9e-64 Score=569.41 Aligned_cols=501 Identities=23% Similarity=0.301 Sum_probs=390.3
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|.+.++++|+++|+.+. + +.+||+||.++++++|.+|.+.|+++|++|+|+++|+++|+++++
T Consensus 35 ~~~tl~~~l~~~a~~~p~~~Ai~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~l 105 (600)
T PRK08279 35 SKRSLGDVFEEAAARHPDRPALLFE---D------QSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWL 105 (600)
T ss_pred CcccHHHHHHHHHHhCCCCcEEEeC---C------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4578999999999999999999764 2 459999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|+++.++.+++.+++++++++++|++.+....+.+..........++..++.... ....+
T Consensus 106 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 175 (600)
T PRK08279 106 GLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLD----------DPEGY 175 (600)
T ss_pred HHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCcccc----------ccccH
Confidence 99999999999999999999999999999999999988776665554444333333333221100 01234
Q ss_pred HHHHhcCCCC----CCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHH
Q 005406 237 LQLQSQGCSS----PQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (698)
Q Consensus 237 ~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (698)
.++....... +.......++++++|+|||||||.||||++||+++.+.+.+....+++.++|++++++|++|.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~ 255 (600)
T PRK08279 176 EDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGG 255 (600)
T ss_pred HHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhH
Confidence 4443322111 111233467899999999999999999999999999999888777899999999999999999999
Q ss_pred HHHH-HHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005406 313 ANQI-VSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (698)
Q Consensus 313 ~~~~-~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (698)
...+ .++..|+++++.+ +++..+++.++++++|++.++|+++..+.......
T Consensus 256 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~-------------------------- 309 (600)
T PRK08279 256 TVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKP-------------------------- 309 (600)
T ss_pred HHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCc--------------------------
Confidence 8754 5677888888876 78999999999999999999999988776521000
Q ss_pred CCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCC-ceecccCcchhcchhcccCCCCCCCCCccCCC
Q 005406 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGDNLSGHVGSPN 469 (698)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~ 469 (698)
. ....++|.+ +|+++++++.+.|...++. .+++.||+||++..++.. ....+++|.+.
T Consensus 310 ---~-------------~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~---~~~~~~~g~~~ 368 (600)
T PRK08279 310 ---T-------------DRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV---FNFDGTVGRVP 368 (600)
T ss_pred ---c-------------ccCcceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc---CCCCccccccc
Confidence 0 001367654 4778999999999988876 599999999987643321 23456788766
Q ss_pred C----CcEEEEEecCCCC-------CCCCCCCCCccEEE--EeCCCccccccCChhhhcccc------cCCCceecCcEE
Q 005406 470 P----ACEIKLVDVPEMN-------YTSEDQPHPRGEIC--VRGPIVFQGYYKNEVQTREVI------DGDGWLHTGDIG 530 (698)
Q Consensus 470 ~----~~~v~i~d~~~~~-------~~~~~~~~~~GEl~--v~g~~~~~GY~~~~~~t~~~f------~~~gw~~TGDlg 530 (698)
+ +..+...+.+.+. ......+++.|||+ ++|++++.|| ++++.|.+.| +.++||+|||+|
T Consensus 369 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg 447 (600)
T PRK08279 369 LWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLM 447 (600)
T ss_pred ccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceE
Confidence 6 3333322211111 11122334589998 7899999999 9999888776 246899999999
Q ss_pred EEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC----CCeEEEEEEcChhHHHHHHHHcCCC
Q 005406 531 LWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF----NSCLVAIVAVDPDVLKDWAASQGIK 606 (698)
Q Consensus 531 ~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~----~~~~va~vv~~~~~~~~~~~~~~~~ 606 (698)
++|+||.+++.||.||+||+ +|++|+|.|||+++.+||+|.+|+|+|.+. +...+++++..++. ..+
T Consensus 448 ~~~~dG~l~~~GR~~d~ik~-~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~--------~~~ 518 (600)
T PRK08279 448 RDDGFGHAQFVDRLGDTFRW-KGENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGA--------EFD 518 (600)
T ss_pred EEcCCccEEEecccCCeEEE-CCcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCc--------cCC
Confidence 99999999999999999997 899999999999999999999999998542 33445555544211 011
Q ss_pred cccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 607 FEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 607 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
.++++++++ .+|+.|++|+.|++++++| +|++||++|++|++.+.+.
T Consensus 519 -----------------~~~l~~~l~-~~L~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 519 -----------------LAALAAHLY-ERLPAYAVPLFVRLVPELE------TTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred -----------------HHHHHHHHH-hhCccccCCeEEEeecCCC------CCcchhhhHHHHhhcCCCc
Confidence 356666775 6799999999999999999 9999999999999877554
No 91
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.5e-64 Score=549.09 Aligned_cols=424 Identities=20% Similarity=0.196 Sum_probs=350.6
Q ss_pred EeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEec
Q 005406 114 MTYGEVSAARKEIGSGLLFHGL-QKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCI 192 (698)
Q Consensus 114 ~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~ 192 (698)
+.|+||.+++.++|++|++.|+ ++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++++++++++++
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 6899999999999999999998 579999999999999999999999999999999999999999999999999999987
Q ss_pred ccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcc
Q 005406 193 PQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPK 272 (698)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK 272 (698)
.+..... .... . .......++++++++|||||||.||
T Consensus 100 ~~~~~~~---------------~~~~--------------------------~--~~~~~~~~~~~~~i~~TSGTTG~PK 136 (452)
T PRK07445 100 DQLKLSH---------------PPPL--------------------------P--SQGILPNLETGWIMIPTGGSSGQIR 136 (452)
T ss_pred Ccccccc---------------CCCC--------------------------C--ccccCCCCCCcEEEEeCCCCCCCCc
Confidence 6432100 0000 0 0001235689999999999999999
Q ss_pred eeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCC-ChhhHHHHHhhhcCcEEeech
Q 005406 273 GAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQG-DNLKLMDDLAVLKPTIFPSVP 351 (698)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~-~~~~l~~~i~~~~~t~~~~~P 351 (698)
||++||+++.+.+......+++.+ ++.++++|++|.+|+...+.+++.|+++++.+. ...........+++|+++++|
T Consensus 137 gV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP 215 (452)
T PRK07445 137 FAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVP 215 (452)
T ss_pred EEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehH
Confidence 999999999888877666666654 467889999999999888889999999998762 223223334578899999999
Q ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHH
Q 005406 352 RLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFL 431 (698)
Q Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~ 431 (698)
+++..+.+.... ..+++|.+++||+++++++.+.+
T Consensus 216 ~~l~~l~~~~~~---------------------------------------------~l~~l~~i~~gG~~l~~~~~~~~ 250 (452)
T PRK07445 216 TQLQRLLQLRPQ---------------------------------------------WLAQFRTILLGGAPAWPSLLEQA 250 (452)
T ss_pred HHHHHHHhhChh---------------------------------------------hhhcceEEEECCccCCHHHHHHH
Confidence 999887651000 01489999999999999999988
Q ss_pred HHHhCCceecccCcchhcchhcccCCCC--CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccC
Q 005406 432 KVCFGCQVMEGYGMTETSCIISAIDKGD--NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYK 509 (698)
Q Consensus 432 ~~~~g~~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~ 509 (698)
.. +++++++.||+||++..++...+.+ ...+++|+|+|+++++|++ + ..|||+|+|++++.|||+
T Consensus 251 ~~-~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~~---------g---~~Gel~v~g~~~~~gY~~ 317 (452)
T PRK07445 251 RQ-LQLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIPA---------N---QTGNITIQAQSLALGYYP 317 (452)
T ss_pred Hh-cCCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEcC---------C---CcceEEEeCCccchhhcC
Confidence 76 5899999999999986554433332 3457899999999999971 1 379999999999999998
Q ss_pred ChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEE
Q 005406 510 NEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLV 586 (698)
Q Consensus 510 ~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~v 586 (698)
++. +.+|||+|||+|++|+||+|+|.||.||+||+ +|++|+|.|||+++.+||+|.+|+|+|.++ ++.++
T Consensus 318 ~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~-~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~ 390 (452)
T PRK07445 318 QIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIIT-GGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVT 390 (452)
T ss_pred Ccc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEE-CCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEE
Confidence 643 35799999999999999999999999999996 899999999999999999999999999654 46789
Q ss_pred EEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCC
Q 005406 587 AIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIK 666 (698)
Q Consensus 587 a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~ 666 (698)
|++++.+.. .+ .++++++++ .+|+.|++|+.+++++++| +|++||++
T Consensus 391 a~vv~~~~~---------~~-----------------~~~l~~~~~-~~L~~~~~P~~i~~v~~lP------~t~~GKi~ 437 (452)
T PRK07445 391 AIYVPKDPS---------IS-----------------LEELKTAIK-DQLSPFKQPKHWIPVPQLP------RNPQGKIN 437 (452)
T ss_pred EEEEeCCCC---------CC-----------------HHHHHHHHH-HhCCcccCCeEEEEecCCC------CCCCcccC
Confidence 999876531 00 345566665 6799999999999999999 99999999
Q ss_pred hHHHHHHHHHHHH
Q 005406 667 RPQAKERFAKAIS 679 (698)
Q Consensus 667 R~~l~~~~~~~i~ 679 (698)
|++|++.|.++|+
T Consensus 438 r~~L~~~~~~~~~ 450 (452)
T PRK07445 438 RQQLQQIAVQRLG 450 (452)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999988774
No 92
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.3e-63 Score=556.62 Aligned_cols=484 Identities=18% Similarity=0.217 Sum_probs=393.7
Q ss_pred CHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005406 80 TLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (698)
Q Consensus 80 tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~ 159 (698)
++.+.|.+.+..+|+++|+... + +.+||+||.+++.++|..|.+.|+++|++|+|+++|+.+|+++++||+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~ 71 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ---G------QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSI 71 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHH
Confidence 4678999999999999998653 2 359999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHH
Q 005406 160 AYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQL 239 (698)
Q Consensus 160 ~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (698)
++|++++|+++.++.+++.++++..+++.++++........ ... ++.++ ...++
T Consensus 72 ~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-------~~~-~~~~~------------------~~~~~ 125 (502)
T TIGR01734 72 KSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAV-------GTQ-IITLS------------------ALEQA 125 (502)
T ss_pred HhCCEEeCCCCcChHHHHHHHHHhcCCCEEEeccccccccc-------CCc-eEEch------------------Hhhhh
Confidence 99999999999999999999999999999999876432211 011 11111 01111
Q ss_pred HhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHH
Q 005406 240 QSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSV 319 (698)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l 319 (698)
...... ........++++++|+|||||||.||+|+++|+++.+.+.+....+++..++++++.+|++|.+++...+.++
T Consensus 126 ~~~~~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l 204 (502)
T TIGR01734 126 ETSGGP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCL 204 (502)
T ss_pred hhhcCC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHH
Confidence 111111 1111234678999999999999999999999999999888777778888999999999999999998888999
Q ss_pred HhCcEEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCch
Q 005406 320 YYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSK 395 (698)
Q Consensus 320 ~~G~~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~ 395 (698)
..|+++++.+ .++..+++.++++++|.+.++|.++..+......
T Consensus 205 ~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~-------------------------------- 252 (502)
T TIGR01734 205 ASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNF-------------------------------- 252 (502)
T ss_pred HCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccc--------------------------------
Confidence 9999999876 4788999999999999999999998766532100
Q ss_pred hhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCC-----CCCCCCccCCC
Q 005406 396 MWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG-----DNLSGHVGSPN 469 (698)
Q Consensus 396 ~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~-----~~~~~~vG~p~ 469 (698)
.....++++.+++||+++++++.+.+.+.+ ++.+++.||+||+++.++..... .....++|.|.
T Consensus 253 ----------~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~ 322 (502)
T TIGR01734 253 ----------NQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAK 322 (502)
T ss_pred ----------ccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCcccccccc
Confidence 000115899999999999999999988877 78999999999987644432211 13345799999
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccc---cCCCceecCcEEEEecCCcEEEEccCCC
Q 005406 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI---DGDGWLHTGDIGLWLPGGRLKIIDRKKN 546 (698)
Q Consensus 470 ~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f---~~~gw~~TGDlg~~~~~G~l~i~GR~~d 546 (698)
++++++|+| +++...+.++ .|||+++|++++.||+++++.|.+.| ++++||+|||+|++|++ +++++||.+|
T Consensus 323 ~~~~~~i~~-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d 397 (502)
T TIGR01734 323 PDMNLFIMD-EEGEPLPEGE---KGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDF 397 (502)
T ss_pred CCCEEEEEC-CCCCCCCCCC---eeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccC
Confidence 999999999 4445555554 89999999999999999999998876 34569999999999976 9999999999
Q ss_pred eEecCCceeecchHHHHHHhcCcCceeEEEEEcC----CCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHH
Q 005406 547 IFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS----FNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAA 622 (698)
Q Consensus 547 ~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~----~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (698)
+||+ +|++|+|.+||+++.++|.|.+++|++.. ..+.++++|++...... .. ..
T Consensus 398 ~i~~-~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~----~~ 455 (502)
T TIGR01734 398 QIKL-HGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFE-----------------KE----FQ 455 (502)
T ss_pred eEEE-CcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccc-----------------cc----hh
Confidence 9997 89999999999999999999999999832 23678999998763211 01 12
Q ss_pred HHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 623 VLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 623 i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
+.+++++.++ .+|+.|++|+.+++++++| +|++||++|++|++.+.
T Consensus 456 ~~~~i~~~~~-~~l~~~~~P~~~~~v~~lP------~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 456 LTKAIKKELK-KSLPAYMIPRKFIYRDQLP------LTANGKIDRKALAEEVN 501 (502)
T ss_pred hHHHHHHHHh-hhChhhcCCcEEEEccccC------CCCCCcccHHHHHHhhc
Confidence 2355666664 7899999999999999999 99999999999999763
No 93
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.2e-63 Score=557.78 Aligned_cols=509 Identities=23% Similarity=0.325 Sum_probs=400.9
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
..++.++|+++++.+|+++|+.+. + +.+||.||++++.++|.+|.+.|+++|++|+++++|+++|+++++|
T Consensus 32 ~~~l~~~l~~~a~~~p~~~al~~~---~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 102 (567)
T PRK06178 32 ERPLTEYLRAWARERPQRPAIIFY---G------HVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFG 102 (567)
T ss_pred cccHHHHHHHHHHHCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHH
Confidence 368999999999999999999653 2 3599999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCC--CCC--CCCCC---CC
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDE--HLP--SLPST---SG 230 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~--~~~--~~~~~---~~ 230 (698)
|+++|++++|++|.++.+++.+++++++++++++++...+.+.+..... ..+.++..+.... ... ..... ..
T Consensus 103 ~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (567)
T PRK06178 103 ILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET-SLRHVIVTSLADVLPAEPTLPLPDSLRAPR 181 (567)
T ss_pred HHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC-CcceEEEecccccccccccccccccccccc
Confidence 9999999999999999999999999999999999988777666554433 2344443321110 000 00000 00
Q ss_pred ceEeeHHHHHhcCCC--CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc-ccccCCCcEEEEcCChh
Q 005406 231 VKLISYLQLQSQGCS--SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL-MVQFYPSDIYMSYLPLA 307 (698)
Q Consensus 231 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~-~~~~~~~d~~l~~~pl~ 307 (698)
.....+.++...... .........++++++|+|||||||.||||++||+++...+..... ...+.++|++++++|++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 261 (567)
T PRK06178 182 LAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEF 261 (567)
T ss_pred ccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchH
Confidence 000112222221111 111223356899999999999999999999999998876554332 25678899999999999
Q ss_pred hHHHHHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Q 005406 308 HIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQ 385 (698)
Q Consensus 308 h~~~~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~ 385 (698)
|.+++.. .+.+++.|+++++.+ .++..++..++++++|.+.++|..+..+..... ..
T Consensus 262 ~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~--~~------------------- 320 (567)
T PRK06178 262 WIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPR--FA------------------- 320 (567)
T ss_pred HHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC--CC-------------------
Confidence 9999865 677899999999987 689999999999999999999998877654200 00
Q ss_pred HHHcCCCCchhhHHHHHHHHHHHcCCcEEEEE--ecCCCCCHHHHHHHHHHhCCceec-ccCcchhcchhcccCC---C-
Q 005406 386 AIVSGQTPSKMWDRLVFNKIRERLGGRVRFMG--SGASPLSPDVMDFLKVCFGCQVME-GYGMTETSCIISAIDK---G- 458 (698)
Q Consensus 386 ~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~--~gG~~l~~~~~~~~~~~~g~~l~~-~YG~TE~~~~~~~~~~---~- 458 (698)
. .+ ..+++.+. ++++++++++.+.|+..+|..++. .||+||++..+..... .
T Consensus 321 --------~--~~-----------l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~ 379 (567)
T PRK06178 321 --------E--YD-----------LSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDD 379 (567)
T ss_pred --------C--CC-----------cchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCc
Confidence 0 00 02455543 446999999999999988877775 7999998765443221 1
Q ss_pred ---CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecC
Q 005406 459 ---DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG 535 (698)
Q Consensus 459 ---~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~ 535 (698)
...++++|.|++|++++++|++++..++.++ .|||+++|++++.|||++++.+++.| .+|||+|||+|+++++
T Consensus 380 ~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~---~Gel~v~g~~v~~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~ 455 (567)
T PRK06178 380 FDLLSQPVFVGLPVPGTEFKICDFETGELLPLGA---EGEIVVRTPSLLKGYWNKPEATAEAL-RDGWLHTGDIGKIDEQ 455 (567)
T ss_pred cccccCCcccccccCCcEEEEEcCCCCCcCCCCC---ceEEEEECCcccccccCChhhhhhcc-cCCceeecceEEEecC
Confidence 1345679999999999999977777776665 89999999999999999999999888 6899999999999999
Q ss_pred CcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHH
Q 005406 536 GRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQ 612 (698)
Q Consensus 536 G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~ 612 (698)
|+++|+||++|+||+ +|++|+|.+||+++.++|+|.+++|++.++ ++.++++|++.+.. ..
T Consensus 456 g~l~i~GR~~d~i~~-~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~--------~~------- 519 (567)
T PRK06178 456 GFLHYLGRRKEMLKV-NGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGA--------DL------- 519 (567)
T ss_pred CeEEEEecccccEEE-CCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCC--------cC-------
Confidence 999999999999997 899999999999999999999999998543 46788999887532 00
Q ss_pred hhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 613 LCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 613 ~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
..++|+++++ .+|+.|++|. +++++++| +|++||++|++|++.+++
T Consensus 520 ----------~~~~l~~~~~-~~l~~~~~p~-i~~v~~iP------~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 520 ----------TAAALQAWCR-ENMAVYKVPE-IRIVDALP------MTATGKVRKQDLQALAEE 565 (567)
T ss_pred ----------CHHHHHHHHH-hcCcccCCce-EEEeccCC------CCCccceeHHHHHHHHHh
Confidence 1345666665 6799999996 88899999 999999999999988865
No 94
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=4.7e-63 Score=559.14 Aligned_cols=506 Identities=25% Similarity=0.365 Sum_probs=400.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLL-FHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
..++.++|.++++++|+++|++.. + +.+||+||.+++.++|.+|. +.|+++|++|+++++|+++++++++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 94 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSF---G------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATF 94 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEEC---C------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 467999999999999999999753 2 45999999999999999997 6899999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCC-CC-------------
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDE-HL------------- 222 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~-~~------------- 222 (698)
||+++|++++|++|.++.+++.+++++++++++++++.....+.......+ ...++..+.... ..
T Consensus 95 A~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (560)
T PRK08751 95 GVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP-VKQVITTGLGDMLGFPKAALVNFVVKYV 173 (560)
T ss_pred HHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC-ccEEEEechhhhcccccchhhhhhhhhh
Confidence 999999999999999999999999999999999998877655555444433 223333221000 00
Q ss_pred CC-CCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccc----cCC-
Q 005406 223 PS-LPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQ----FYP- 296 (698)
Q Consensus 223 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~----~~~- 296 (698)
.. ...........+.+..........+.....++++++++|||||||.||||++||.++...+......+. +.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~ 253 (560)
T PRK08751 174 KKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEG 253 (560)
T ss_pred hccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCC
Confidence 00 000000011345555544332222333456799999999999999999999999999877765444332 333
Q ss_pred CcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHH
Q 005406 297 SDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLRE 373 (698)
Q Consensus 297 ~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 373 (698)
.+++++.+|++|.+++.. .+.++..|++.++.. .++..+++.++++++|++.++|.++..+.+... .
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~-------- 323 (560)
T PRK08751 254 CEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPG--F-------- 323 (560)
T ss_pred CceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcC--c--------
Confidence 367889999999999875 456677777776654 588999999999999999999999988765200 0
Q ss_pred HHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhc
Q 005406 374 KLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIIS 453 (698)
Q Consensus 374 ~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~ 453 (698)
.-++ + +++|.+++||+++++.+.+.|++.+|+.+++.||+||++..++
T Consensus 324 ---------------------~~~~---l--------~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~ 371 (560)
T PRK08751 324 ---------------------DQID---F--------SSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAAC 371 (560)
T ss_pred ---------------------CCcc---h--------hhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCcee
Confidence 0000 0 4799999999999999999999988999999999999987665
Q ss_pred ccCCC-CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEE
Q 005406 454 AIDKG-DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLW 532 (698)
Q Consensus 454 ~~~~~-~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~ 532 (698)
..... ....+++|.|+++++++++| +++..++.+. .|||+++|+.++.||+++++.|++.|+.+|||+|||+|++
T Consensus 372 ~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~ 447 (560)
T PRK08751 372 INPLTLKEYNGSIGLPIPSTDACIKD-DAGTVLAIGE---IGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARM 447 (560)
T ss_pred cccccccccCCCcCccCCCceEEEEC-CCCCCCCCCC---ceEEEEecCccchhhcCChhhhhhccccCCCccccceEEE
Confidence 44322 24457899999999999999 5666666555 8999999999999999999999999988999999999999
Q ss_pred ecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCccc
Q 005406 533 LPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFED 609 (698)
Q Consensus 533 ~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~ 609 (698)
+++|.+++.||.+|+||+ +|++|+|.+||+++..+|+|.+++|++.++ ++.++++++..... .+
T Consensus 448 ~~~g~l~i~GR~~d~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~~---------~~--- 514 (560)
T PRK08751 448 DEQGFVYIVDRKKDMILV-SGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKKDPA---------LT--- 514 (560)
T ss_pred cCCceEEEEeechhheeE-CCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcCCCC---------CC---
Confidence 999999999999999997 899999999999999999999999999654 35667777654311 11
Q ss_pred HHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHH
Q 005406 610 LEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKER 673 (698)
Q Consensus 610 ~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~ 673 (698)
.+++++.++ .+|+.|++|+.|++++++| +|++||++|++|++.
T Consensus 515 --------------~~~l~~~~~-~~l~~~~~P~~v~~v~~lP------~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 515 --------------AEDVKAHAR-ANLTGYKQPRIIEFRKELP------KTNVGKILRRELRDA 557 (560)
T ss_pred --------------HHHHHHHHH-HhhhhccCCeEEEEhhhCC------CCccccccHHHHHHh
Confidence 234555554 5789999999999999999 999999999999875
No 95
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.2e-63 Score=559.70 Aligned_cols=509 Identities=24% Similarity=0.335 Sum_probs=397.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
.++++++|...+.++|+++|+.+. + +.+||+||++++.++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 23 ~~~~~~~~~~~a~~~p~~~a~~~~---~------~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA 93 (563)
T PRK06710 23 IQPLHKYVEQMASRYPEKKALHFL---G------KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYG 93 (563)
T ss_pred cccHHHHHHHHHHHCCCceEEEec---C------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHH
Confidence 468999999999999999999764 2 4599999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCC-CCCCC-----CCC----
Q 005406 158 CSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKD-EHLPS-----LPS---- 227 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~-~~~~~-----~~~---- 227 (698)
|+++|++++|++|.++.+++.++++.+++++++++......+....... ....+++..... ..... ...
T Consensus 94 ~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (563)
T PRK06710 94 TLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT-KIEHVIVTRIADFLPFPKNLLYPFVQKKQS 172 (563)
T ss_pred HHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh-ccceeEEeccccccccccccccchhhcccc
Confidence 9999999999999999999999999999999999876544433322111 122222211000 00000 000
Q ss_pred ------CCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc-ccccC-CCcE
Q 005406 228 ------TSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL-MVQFY-PSDI 299 (698)
Q Consensus 228 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~-~~~~~-~~d~ 299 (698)
........|..+.... ..........++++++++|||||||.||||+++|+++......... .++.. .+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~ 251 (563)
T PRK06710 173 NLVVKVSESETIHLWNSVEKEV-NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEV 251 (563)
T ss_pred cccccccccchhhhhhhhhhcc-ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCce
Confidence 0000001122221111 1111111123578999999999999999999999998755432222 23333 4568
Q ss_pred EEEcCChhhHHHHHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHH
Q 005406 300 YMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFT 377 (698)
Q Consensus 300 ~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~ 377 (698)
+++++|++|.+++.. .+.+++.|+++++.+ .++..+++.|+++++|++.++|+++..+......
T Consensus 252 ~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-------------- 317 (563)
T PRK06710 252 VLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLL-------------- 317 (563)
T ss_pred EEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCcc--------------
Confidence 899999999999876 456888999998876 6899999999999999999999999887642100
Q ss_pred HHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCC
Q 005406 378 AAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDK 457 (698)
Q Consensus 378 ~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~ 457 (698)
. ....+++|.+++||+++++++.+++.+.+++++++.||+||++.++.....
T Consensus 318 -----------------~-----------~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~ 369 (563)
T PRK06710 318 -----------------K-----------EYDISSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFL 369 (563)
T ss_pred -----------------c-----------cCChhhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCccccccCcc
Confidence 0 000047899999999999999999998889999999999999876543322
Q ss_pred -CCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCC
Q 005406 458 -GDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGG 536 (698)
Q Consensus 458 -~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G 536 (698)
.....+++|.|.++++++++|++++..++.+. .|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|
T Consensus 370 ~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g 445 (563)
T PRK06710 370 WEKRVPGSIGVPWPDTEAMIMSLETGEALPPGE---IGEIVVKGPQIMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDG 445 (563)
T ss_pred cccccCCccCCCCCCCeEEEEECCCCccCCCCC---ceEEEEecCccchhhhCChHHHhhhc-ccCcccccceEEEcCCC
Confidence 22345789999999999999977766666665 89999999999999999999999988 68999999999999999
Q ss_pred cEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHh
Q 005406 537 RLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQL 613 (698)
Q Consensus 537 ~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~ 613 (698)
.++++||.||+||+ +|++|+|.+||+++.++|.|.+++|++.++ ++.++++|++.+.. ..+
T Consensus 446 ~~~~~GR~dd~i~~-~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~--------~~~------- 509 (563)
T PRK06710 446 FFYVKDRKKDMIVA-SGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGT--------ECS------- 509 (563)
T ss_pred cEEEeeccccEEEE-CCEEECHHHHHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCC--------CCC-------
Confidence 99999999999997 899999999999999999999999999543 56788888877632 000
Q ss_pred hCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 614 CNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 614 ~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.++++++++ ..|+.|++|..|.+++++| +|++||++|++|++.+..
T Consensus 510 ----------~~~l~~~~~-~~l~~~~~P~~~~~v~~iP------~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 510 ----------EEELNQFAR-KYLAAYKVPKVYEFRDELP------KTTVGKILRRVLIEEEKR 555 (563)
T ss_pred ----------HHHHHHHHH-HhcccccCCcEEEEcccCC------CCccchhhHHHHHHHHhh
Confidence 345556664 6799999999999999999 999999999999987754
No 96
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.9e-62 Score=551.54 Aligned_cols=506 Identities=26% Similarity=0.363 Sum_probs=396.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|+.++|+++++++|+++|+... + +.+||.||.++++++|.+|.+.|+++|++|+++++|+++|+++++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 89 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFR---D------RPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFF 89 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEEC---C------cEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 3558999999999999999998653 2 459999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc--hHHHHhhhhcCCceeEEEEeCCCCCCCCCC---CCCCCc
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT--LNTLLSFISEIPSVHLIVVVGGKDEHLPSL---PSTSGV 231 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~---~~~~~~ 231 (698)
||+++|++++|++|.++.+++.+++++++++++|+++.. ...+.+.... ..+..+++.+......... ......
T Consensus 90 a~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (541)
T TIGR03205 90 GALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK-GLLDRLIVCEDDNWGKVGTPQAPIPADP 168 (541)
T ss_pred HHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc-ccceEEEEecccccccccccccccCCCc
Confidence 999999999999999999999999999999999997531 1122221111 1133444443321100000 000112
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc-----ccccCCCcEEEEcCCh
Q 005406 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL-----MVQFYPSDIYMSYLPL 306 (698)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~-----~~~~~~~d~~l~~~pl 306 (698)
...+++++...... ........++++++++|||||||.||||+++|+++......... .......+++++.+|+
T Consensus 169 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 247 (541)
T TIGR03205 169 RIVTYADFVKGAAA-PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPL 247 (541)
T ss_pred ccccHHHHHhcCCC-CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccH
Confidence 24566776653322 12223456789999999999999999999999998765542211 1122345799999999
Q ss_pred hhHHHHHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005406 307 AHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (698)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (698)
+|.+++.. .+.+++.|+++++.. .++..+++.|+++++|++.++|+++..+.+... .
T Consensus 248 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~------------------- 306 (541)
T TIGR03205 248 FHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPS--L------------------- 306 (541)
T ss_pred HHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCcc--c-------------------
Confidence 99999876 567888999988876 689999999999999999999999987754100 0
Q ss_pred HHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCC
Q 005406 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSG 463 (698)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~ 463 (698)
.....+++|.+++||+++++++.+++.+.+++++++.||+||++..++..... ...++
T Consensus 307 ---------------------~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~ 365 (541)
T TIGR03205 307 ---------------------EKRDLSSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPEGPDKPG 365 (541)
T ss_pred ---------------------cccCccccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCCCCCCCC
Confidence 00001479999999999999999999888899999999999998766554332 23467
Q ss_pred CccCCCCCcEEEEEecC-CCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEc
Q 005406 464 HVGSPNPACEIKLVDVP-EMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIID 542 (698)
Q Consensus 464 ~vG~p~~~~~v~i~d~~-~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~G 542 (698)
++|.|++++++++++.+ +++.++.+ ..|||+++|++++.|||++|+.|++.| .++||+|||+++++++|+++|+|
T Consensus 366 ~~G~~~~~~~~~v~~~d~~~~~~~~g---~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~G 441 (541)
T TIGR03205 366 SIGLMLPGIELDVVSLDDPTKVLPPG---EVGELRIRGPNVTRGYWNRPEESAEAF-VGDRFLTGDIGYMDTDGYFFLVD 441 (541)
T ss_pred CcceeccCceeEEEecCCCCccCCCC---CeeEEEEecCCccccccCChhhhHhhh-ccCCcccCceEEEcCCceEEEEc
Confidence 89999999999987643 33444444 489999999999999999999999998 57899999999999999999999
Q ss_pred cCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHH
Q 005406 543 RKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRA 619 (698)
Q Consensus 543 R~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (698)
|.||+||+ +|++|+|.+||+++.++|+|.+++|++.++ ++.+++++++.++.. ..+
T Consensus 442 R~~~~i~~-~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-------~~~------------- 500 (541)
T TIGR03205 442 RKKDMIIS-GGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAK-------PFS------------- 500 (541)
T ss_pred cccCeEEE-CCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEECCCCC-------cCC-------------
Confidence 99999996 899999999999999999999999998543 467888888775310 000
Q ss_pred HHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHH
Q 005406 620 RAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAK 671 (698)
Q Consensus 620 ~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~ 671 (698)
.+++.++++ +.|+.|++|+.|++++++| +|++||++|++|+
T Consensus 501 ----~~~l~~~~~-~~l~~~~~P~~i~~~~~iP------~t~~gK~~r~~l~ 541 (541)
T TIGR03205 501 ----LDELRAFLA-GKLGKHELPVAVEFVDELP------RTPVGKLSRHELR 541 (541)
T ss_pred ----HHHHHHHHH-hhcccccCCcEEEEeccCC------CCcccceeHhhcC
Confidence 234555554 6799999999999999999 9999999999874
No 97
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.3e-63 Score=545.28 Aligned_cols=453 Identities=23% Similarity=0.292 Sum_probs=374.8
Q ss_pred HHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEec
Q 005406 89 VENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPL 168 (698)
Q Consensus 89 a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl 168 (698)
+.+.++++|+.+. + +.+||+||.++++++|..|+ ++++|+++++|+++|+++++||+++|++++|+
T Consensus 10 ~~~~~~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l 75 (471)
T PRK07787 10 AAAADIADAVRIG---G------RVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPV 75 (471)
T ss_pred hcccCCceEEEeC---C------cEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeec
Confidence 4567888888653 2 46999999999999999996 46899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCC
Q 005406 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQ 248 (698)
Q Consensus 169 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (698)
++.++.+++.++++++++++++++.+.. ...++.+... ... ..+ .
T Consensus 76 ~~~~~~~~l~~~l~~~~~~~il~~~~~~------~~~~~~~~~~--~~~----------------~~~-----------~ 120 (471)
T PRK07787 76 PPDSGVAERRHILADSGAQAWLGPAPDD------PAGLPHVPVR--LHA----------------RSW-----------H 120 (471)
T ss_pred CCCCChHHHHHHHHhcCCCEEEecCCcc------cccccceeee--ccc----------------ccc-----------c
Confidence 9999999999999999999999976311 0011111100 000 000 0
Q ss_pred CCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEE
Q 005406 249 PFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGF 327 (698)
Q Consensus 249 ~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~ 327 (698)
......++++++|+|||||||.||||+++|+++...+......+++.++|++++.+|++|.+++.. .+.+++.|+++++
T Consensus 121 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 200 (471)
T PRK07787 121 RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVH 200 (471)
T ss_pred cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEe
Confidence 111246789999999999999999999999999998887777788899999999999999999887 6778999999988
Q ss_pred eC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHH
Q 005406 328 YQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIR 406 (698)
Q Consensus 328 ~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~ 406 (698)
.+ .++..+++.++ +++|++.++|+++..+.+....
T Consensus 201 ~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~------------------------------------------- 236 (471)
T PRK07787 201 TGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA------------------------------------------- 236 (471)
T ss_pred cCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-------------------------------------------
Confidence 76 78999999999 9999999999999888752100
Q ss_pred HHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCC
Q 005406 407 ERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTS 486 (698)
Q Consensus 407 ~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~ 486 (698)
.....++|.+++||+++++++.++|.+.++.++++.||+||++...+........++++|+|+++++++|+|.+ +..++
T Consensus 237 ~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~g~~~~i~d~~-~~~~~ 315 (471)
T PRK07787 237 ARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRADGERRPGWVGLPLAGVETRLVDED-GGPVP 315 (471)
T ss_pred cccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCCCCcccCCcccccCCCcEEEEECCC-CCCCC
Confidence 00014799999999999999999999989999999999999986554443334456789999999999999944 44443
Q ss_pred C-CCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccC-CCeEecCCceeecchHHHHH
Q 005406 487 E-DQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRK-KNIFKLAQGEYVAPEKIENV 564 (698)
Q Consensus 487 ~-~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~-~d~ikls~G~~v~p~eIE~~ 564 (698)
. +. ..|||+++|++++.||+++++.|++.|..+|||+|||+|++++||+++++||+ |++||. +|++|+|.+||++
T Consensus 316 ~~~~--~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~-~G~~v~~~eIE~~ 392 (471)
T PRK07787 316 HDGE--TVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKS-GGYRIGAGEIETA 392 (471)
T ss_pred CCCC--CceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEee-CCEEECHHHHHHH
Confidence 2 21 27999999999999999999999999988999999999999999999999996 899996 8999999999999
Q ss_pred HhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcce
Q 005406 565 YAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEY 641 (698)
Q Consensus 565 l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~ 641 (698)
+.++|.|.+++|++.++ ++.++++|++.... + .+++.++++ ..|+.|++
T Consensus 393 l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~----------~-----------------~~~l~~~l~-~~l~~~~~ 444 (471)
T PRK07787 393 LLGHPGVREAAVVGVPDDDLGQRIVAYVVGADDV----------A-----------------ADELIDFVA-QQLSVHKR 444 (471)
T ss_pred HHhCCCcceEEEEcccccccCeEEEEEEEeCCCC----------C-----------------HHHHHHHHH-hhcccccC
Confidence 99999999999999654 46889999874311 1 234555554 67899999
Q ss_pred eeEEEEecCCCCCCCCccCcccCCChHHHHH
Q 005406 642 AKAVTLMPEPFSVENGLLTPTFKIKRPQAKE 672 (698)
Q Consensus 642 p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~ 672 (698)
|..|++++++| +|++||++|++|++
T Consensus 445 P~~i~~~~~iP------~~~~GKi~r~~L~~ 469 (471)
T PRK07787 445 PREVRFVDALP------RNAMGKVLKKQLLS 469 (471)
T ss_pred CcEEEEeccCC------CCCCccccHHHhcc
Confidence 99999999999 99999999999975
No 98
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.8e-62 Score=597.85 Aligned_cols=496 Identities=22% Similarity=0.230 Sum_probs=392.9
Q ss_pred CCCCHHHHHHHHHHhCCC-CCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPD-YKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVD 155 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd-~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~ 155 (698)
...++.+.|.+.++++|+ +.++.+. + .+.+||+||+++++++|++|++ |+++||+|+++++|++++++++
T Consensus 629 ~~~~~~~~l~~~~~~~~~~~~ai~~~---~-----~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~ 699 (1140)
T PRK06814 629 YDRTLFEALIEAAKIHGFKKLAVEDP---V-----NGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTF 699 (1140)
T ss_pred ccCCHHHHHHHHHHHcCCCCeEeECC---C-----CCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHH
Confidence 457788999999999875 5555321 1 2469999999999999999975 9999999999999999999999
Q ss_pred HHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHH--HhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceE
Q 005406 156 HACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTL--LSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKL 233 (698)
Q Consensus 156 lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~ 233 (698)
+||+++|++++|+|++++.+++.++++++++++++++.+..... ......++....++.+++...... ..
T Consensus 700 la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 771 (1140)
T PRK06814 700 FALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIG--------LA 771 (1140)
T ss_pred HHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCC--------hH
Confidence 99999999999999999999999999999999999987654321 111122232333444443211000 00
Q ss_pred eeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHH
Q 005406 234 ISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERA 313 (698)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~ 313 (698)
..+.+....... ..+.....++|+++|+|||||||.||||++||+++.+.+......++++++|++++.+|++|.+++.
T Consensus 772 ~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 850 (1140)
T PRK06814 772 DKIKGLLAGRFP-LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLT 850 (1140)
T ss_pred HHHHHHhhccCC-ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHH
Confidence 011111111111 1111135789999999999999999999999999999888877778899999999999999999985
Q ss_pred H-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005406 314 N-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (698)
Q Consensus 314 ~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (698)
. .+.+++.|+++++.+ .+...+.+.++++++|++.++|+++..+.+...
T Consensus 851 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~---------------------------- 902 (1140)
T PRK06814 851 GGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAH---------------------------- 902 (1140)
T ss_pred HHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc----------------------------
Confidence 4 677899999999876 466778899999999999999999887754200
Q ss_pred CCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCC
Q 005406 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNP 470 (698)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~ 470 (698)
....+++|.+++||+++++++.+.+.+.+|+++++.||+||++..++...+.....+++|+|+|
T Consensus 903 ----------------~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~ 966 (1140)
T PRK06814 903 ----------------PYDFRSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPMHNKAGTVGRLLP 966 (1140)
T ss_pred ----------------cccccceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCCCCCCCcCCccCC
Confidence 0001489999999999999999999998999999999999998776655444556789999999
Q ss_pred CcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEec
Q 005406 471 ACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKL 550 (698)
Q Consensus 471 ~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikl 550 (698)
++++++++.++ .+ +.|||+++|++++.|||++++.+......+|||+|||+|++|+||+++++||.||+||+
T Consensus 967 g~~~~~~~~~~-----~~---~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~ 1038 (1140)
T PRK06814 967 GIEYRLEPVPG-----ID---EGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKI 1038 (1140)
T ss_pred CCeEEEeecCC-----CC---CceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeee
Confidence 99999987432 12 37999999999999999987544322236899999999999999999999999999997
Q ss_pred CCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHH
Q 005406 551 AQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEM 627 (698)
Q Consensus 551 s~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 627 (698)
+|++|+|.|||+++.+||.|.+++|++.++ ++.+++++...+. + .+++
T Consensus 1039 -~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~~~~~-----------~-----------------~~~l 1089 (1140)
T PRK06814 1039 -AGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTTASDA-----------T-----------------RAAF 1089 (1140)
T ss_pred -CCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEcCCCc-----------C-----------------HHHH
Confidence 899999999999999999999999998654 3566665542211 0 3455
Q ss_pred HHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 628 NAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 628 ~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
++++++.+++.|++|+.|++++++| +|++||++|++|++.+.+.
T Consensus 1090 ~~~~~~~~l~~~~~P~~i~~v~~lP------~t~~GKi~r~~L~~~~~~~ 1133 (1140)
T PRK06814 1090 LAHAKAAGASELMVPAEIITIDEIP------LLGTGKIDYVAVTKLAEEA 1133 (1140)
T ss_pred HHHHHHcCCCcccCCcEEEEecCcC------CCCCCCCcHHHHHHHHHHh
Confidence 6666556799999999999999999 9999999999999877654
No 99
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-62 Score=548.52 Aligned_cols=484 Identities=18% Similarity=0.180 Sum_probs=378.0
Q ss_pred HHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEE
Q 005406 87 YAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISV 166 (698)
Q Consensus 87 ~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~v 166 (698)
.+++++|+++|+.+. +. .+.+||+||.++++++|++|.+.|+++||+|+++++|+++|++++|||+++|++++
T Consensus 5 ~~a~~~p~~~a~~~~---~~----~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~ 77 (501)
T PRK13390 5 THAQIAPDRPAVIVA---ET----GEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYIT 77 (501)
T ss_pred hhhhhCCCCcEEEec---CC----CeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 457789999999653 21 25699999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCC
Q 005406 167 PLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSS 246 (698)
Q Consensus 167 pl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (698)
|+++.++++++.++++++++++++++............. ....+.+.... . ....+++......
T Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~---------~--~~~~~~~~~~~~~-- 141 (501)
T PRK13390 78 AINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGAD---LPLRLSFGGEI---------D--GFGSFEAALAGAG-- 141 (501)
T ss_pred ccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhc---cceEEEecCcc---------c--ccccHHHHhcccC--
Confidence 999999999999999999999999986543322221111 11122221110 0 1123333322110
Q ss_pred CCCCCCCCCCCeEEEEecCCCCCCcceeee--chHHHHHHH----HhcccccccCCCcEEEEcCChhhHHHHHHHHHHHH
Q 005406 247 PQPFCPPKPEDIATICYTSGTTGTPKGAVL--THGNLISNV----AGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVY 320 (698)
Q Consensus 247 ~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~--th~~l~~~~----~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~ 320 (698)
+ .....+++++|+|||||||.||||++ +|.++.... ......+.+..+|++++.+|++|.+++...+..+.
T Consensus 142 --~-~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~ 218 (501)
T PRK13390 142 --P-RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHA 218 (501)
T ss_pred --C-CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHh
Confidence 0 01122357999999999999999995 555554321 11122467788999999999999998876656677
Q ss_pred hCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHH
Q 005406 321 YGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (698)
Q Consensus 321 ~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (698)
.|+++++.+ .++..+++.|+++++|++.++|+++..+........
T Consensus 219 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---------------------------------- 264 (501)
T PRK13390 219 LGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVR---------------------------------- 264 (501)
T ss_pred cCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhc----------------------------------
Confidence 899998877 689999999999999999999999988865210000
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCCCccCCCCCcEEEEEe
Q 005406 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVD 478 (698)
Q Consensus 400 ~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i~d 478 (698)
+.....++|.+++||+++++++.+.+.+.++.++++.||+||+++++...... ....+++|+|+++ +++|+|
T Consensus 265 ------~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d 337 (501)
T PRK13390 265 ------TRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICD 337 (501)
T ss_pred ------ccCChhhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEEC
Confidence 00001478999999999999999999988899999999999998654432221 2356789999999 799998
Q ss_pred cCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccC--CCceecCcEEEEecCCcEEEEccCCCeEecCCceee
Q 005406 479 VPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDG--DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYV 556 (698)
Q Consensus 479 ~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~--~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v 556 (698)
+++..++.++ .|||+++|++++.||+++|+.|++.|.. +||++|||+|++|++|++++.||.||+||+ +|++|
T Consensus 338 -~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~-~G~~v 412 (501)
T PRK13390 338 -DDGNELPAGR---IGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIIS-GGVNI 412 (501)
T ss_pred -CCCCCCCCCC---ceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeE-CCeee
Confidence 5556555554 8999999999999999999999988743 689999999999999999999999999996 89999
Q ss_pred cchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHh
Q 005406 557 APEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKE 633 (698)
Q Consensus 557 ~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 633 (698)
+|.+||+++.+||.|.+++|++.++ ++.+++++++.+.. . .. +...++|.++++
T Consensus 413 ~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~----------~--------~~----~~~~~~l~~~~~- 469 (501)
T PRK13390 413 YPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGI----------R--------GS----DELARELIDYTR- 469 (501)
T ss_pred CHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCC----------C--------cc----hhhHHHHHHHHH-
Confidence 9999999999999999999999654 46788888876531 0 00 112356666665
Q ss_pred CCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHH
Q 005406 634 GQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAK 671 (698)
Q Consensus 634 ~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~ 671 (698)
.+|+.|++|..+++++++| +|++||++|++|+
T Consensus 470 ~~l~~~~~P~~~~~~~~iP------~t~~GKi~r~~L~ 501 (501)
T PRK13390 470 SRIAHYKAPRSVEFVDELP------RTPTGKLVKGLLR 501 (501)
T ss_pred HhcccCCCCcEEEEeccCC------CCCccceehhhcC
Confidence 6799999999999999999 9999999999874
No 100
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.5e-62 Score=546.15 Aligned_cols=476 Identities=19% Similarity=0.228 Sum_probs=382.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...++.+.|.+.++.+||++|+.+. + +.+||+||.++++++|++|++.|+++|++|+++++|++++++++|
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 103 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDD---D------GALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVF 103 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeC---C------CcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4578999999999999999999653 2 259999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeH
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISY 236 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 236 (698)
||+++|++++|+++.++.+++.+++++++++.++++......+..... .++.++...
T Consensus 104 a~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~------~~~~~~~~~----------------- 160 (516)
T PRK13383 104 AVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADD------AVAVIDPAT----------------- 160 (516)
T ss_pred HHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhc------ceEEeccch-----------------
Confidence 999999999999999999999999999999999998776554433211 122222110
Q ss_pred HHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHH--HHHhcccccccCCCcEEEEcCChhhHHHHHH
Q 005406 237 LQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLIS--NVAGFSLMVQFYPSDIYMSYLPLAHIYERAN 314 (698)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~--~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~ 314 (698)
..... ....+..+++.++|+|||||||.||||+++|..... ........+++.++|++++.+|++|.+++..
T Consensus 161 ~~~~~------~~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~ 234 (516)
T PRK13383 161 AGAEE------SGGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGM 234 (516)
T ss_pred hhhhc------CCCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHH
Confidence 00000 001112345678999999999999999999984321 1122223467788999999999999999988
Q ss_pred HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCC
Q 005406 315 QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTP 393 (698)
Q Consensus 315 ~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~ 393 (698)
.+.++..|+++++.. .++..+++.++++++|.+.++|.++..+.+...... .
T Consensus 235 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~-------------------------- 287 (516)
T PRK13383 235 LMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVR-A-------------------------- 287 (516)
T ss_pred HHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhcccccc-c--------------------------
Confidence 888899999998766 789999999999999999999999988865211000 0
Q ss_pred chhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCCCccCCCCCc
Q 005406 394 SKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPAC 472 (698)
Q Consensus 394 ~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~ 472 (698)
....+++|.+++||+++++++.+.|.+.+|+.+++.||+||++..+...... ....+++|+|++++
T Consensus 288 -------------~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~ 354 (516)
T PRK13383 288 -------------RNPLPQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVGKPVAGC 354 (516)
T ss_pred -------------cCCCCceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccccceeccccccccCCCcccCCCCCc
Confidence 0001489999999999999999999999999999999999998655433221 23467899999999
Q ss_pred EEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCC
Q 005406 473 EIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQ 552 (698)
Q Consensus 473 ~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~ 552 (698)
+++|+| +++...+.+ +.|||+++|+.++.||++++.. .+ .+|||+|||+|++|++|+++++||.||+||+ +
T Consensus 355 ~~~i~d-~~~~~~~~g---~~Gel~v~g~~~~~~Y~~~~~~---~~-~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~-~ 425 (516)
T PRK13383 355 PVRILD-RNNRPVGPR---VTGRIFVGGELAGTRYTDGGGK---AV-VDGMTSTGDMGYLDNAGRLFIVGREDDMIIS-G 425 (516)
T ss_pred EEEEEC-CCCCCCCCC---CceEEEEecCcccccccCCchh---he-ecCceecceeEEEcCCccEEEeccccceEEE-C
Confidence 999999 445554444 4899999999999999987642 23 5899999999999999999999999999997 8
Q ss_pred ceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHH
Q 005406 553 GEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNA 629 (698)
Q Consensus 553 G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 629 (698)
|++|+|.+||.+|.++|.|.+++|++.++ ++.++++|++++.. ..+ .++|++
T Consensus 426 G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~--------~~~-----------------~~~l~~ 480 (516)
T PRK13383 426 GENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGS--------GVD-----------------AAQLRD 480 (516)
T ss_pred CEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCC--------CCC-----------------HHHHHH
Confidence 99999999999999999999999998543 56788899877531 000 234555
Q ss_pred HHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHH
Q 005406 630 VGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAK 671 (698)
Q Consensus 630 ~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~ 671 (698)
+++ .+|+.|++|..|++++++| +|++||++|++|+
T Consensus 481 ~~~-~~l~~~~~p~~i~~v~~iP------~t~~gKi~r~~L~ 515 (516)
T PRK13383 481 YLK-DRVSRFEQPRDINIVSSIP------RNPTGKVLRKELP 515 (516)
T ss_pred HHH-HhcccCCCCcEEEEeCCCC------CCCCCcCcHHHhC
Confidence 554 6789999999999999999 9999999999874
No 101
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=7.8e-62 Score=542.50 Aligned_cols=483 Identities=19% Similarity=0.218 Sum_probs=397.0
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
+++.++|++.+..+|+++++... + +.+||.||.+++.++|.+|.+.|+++|++|+++++|+.+|+++++||
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~---~------~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~ 72 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL---G------EKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGA 72 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 56889999999999999998653 1 45999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHH
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (698)
+++|++++|+++.++.+++.++++.+++++++++...... .. .+..+.+++
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----------------------~~~~~~~~~ 123 (503)
T PRK04813 73 VKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLE-------IL----------------------GIPVITLDE 123 (503)
T ss_pred HHcCCEEecCCCCChHHHHHHHHHhcCCCEEEeccccccc-------cc----------------------CCcEEehHH
Confidence 9999999999999999999999999999999998654100 00 011122222
Q ss_pred HHhcC--CCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHH
Q 005406 239 LQSQG--CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQI 316 (698)
Q Consensus 239 ~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~ 316 (698)
+.... ...........++++++++|||||||.||||.++|+++...+.+....+.+..++++++.+|++|..+....+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 203 (503)
T PRK04813 124 LKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLY 203 (503)
T ss_pred hhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHH
Confidence 22211 0111112335678999999999999999999999999998888777778888999999999999999988888
Q ss_pred HHHHhCcEEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005406 317 VSVYYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (698)
Q Consensus 317 ~~l~~G~~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (698)
.++..|+++++.+ .++..+++.++++++|++.++|+++..+.....
T Consensus 204 ~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~------------------------------ 253 (503)
T PRK04813 204 PTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPS------------------------------ 253 (503)
T ss_pred HHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhc------------------------------
Confidence 8999999999887 478899999999999999999999876543210
Q ss_pred CchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCC-----CCCCCCcc
Q 005406 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG-----DNLSGHVG 466 (698)
Q Consensus 393 ~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~-----~~~~~~vG 466 (698)
..+...+++|.++++|+++++.+.+++.+.+ ++.+++.||+||++..++..... .....++|
T Consensus 254 ------------~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g 321 (503)
T PRK04813 254 ------------FNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIG 321 (503)
T ss_pred ------------cCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCccc
Confidence 0001115899999999999999999999888 78999999999997654432211 13445799
Q ss_pred CCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccc---cCCCceecCcEEEEecCCcEEEEcc
Q 005406 467 SPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI---DGDGWLHTGDIGLWLPGGRLKIIDR 543 (698)
Q Consensus 467 ~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f---~~~gw~~TGDlg~~~~~G~l~i~GR 543 (698)
.|.++++++|+| +++..++.+. .|||+++|++++.|||++++.|.+.| ++.+||+|||+|++ ++|++++.||
T Consensus 322 ~~~~~~~~~i~d-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR 396 (503)
T PRK04813 322 YAKPDSPLLIID-EEGTKLPDGE---QGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGR 396 (503)
T ss_pred ccCCCCEEEEEC-CCCCCCCCCC---ceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEecc
Confidence 999999999999 4555555554 89999999999999999999998887 33459999999999 9999999999
Q ss_pred CCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHH
Q 005406 544 KKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRAR 620 (698)
Q Consensus 544 ~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (698)
.||+||+ +|++|+|.+||+++.++|+|.+++|++.+. .+.+++++++.++... ..
T Consensus 397 ~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~---- 454 (503)
T PRK04813 397 IDFQIKL-NGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDFE-----------------RE---- 454 (503)
T ss_pred ccceEEE-CcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEecccccc-----------------cc----
Confidence 9999997 899999999999999999999999998443 4678999998763210 01
Q ss_pred HHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHH
Q 005406 621 AAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFA 675 (698)
Q Consensus 621 ~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~ 675 (698)
..+.++++++++ .+|+.|++|+.|++++++| +|++||++|++|++.+.
T Consensus 455 ~~~~~~l~~~~~-~~l~~~~~P~~i~~~~~~P------~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 455 FELTKAIKKELK-ERLMEYMIPRKFIYRDSLP------LTPNGKIDRKALIEEVN 502 (503)
T ss_pred chhHHHHHHHHH-hhCccccCCeEEEEeccCC------CCCCCCCcHHHHHHHhc
Confidence 123456666665 6799999999999999999 99999999999998875
No 102
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-61 Score=541.85 Aligned_cols=495 Identities=19% Similarity=0.227 Sum_probs=396.8
Q ss_pred HHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeE
Q 005406 86 IYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYIS 165 (698)
Q Consensus 86 ~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~ 165 (698)
...++++||++|+.+. ++ .+.+||.||.++++++|++|.+.|+++|++|+++++|+++|+++++||+++|+++
T Consensus 4 ~~~a~~~p~~~a~~~~---~~----~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~ 76 (511)
T PRK13391 4 GIHAQTTPDKPAVIMA---ST----GEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYY 76 (511)
T ss_pred hhhHhhCCCceEEEec---CC----CCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEE
Confidence 4578889999998763 22 2469999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCC
Q 005406 166 VPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCS 245 (698)
Q Consensus 166 vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (698)
+|+++.++.+++.++++.++++.++++......+.+....++.....+..+..... .....+.+.....
T Consensus 77 ~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-- 145 (511)
T PRK13391 77 TCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGEL---------EGFVGYAEAVAGL-- 145 (511)
T ss_pred eccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCC---------cccccHHHHhcCC--
Confidence 99999999999999999999999999988776666555555555555555432110 0122344433211
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCcceeee--chHHHHHH---HHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHH
Q 005406 246 SPQPFCPPKPEDIATICYTSGTTGTPKGAVL--THGNLISN---VAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVY 320 (698)
Q Consensus 246 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~--th~~l~~~---~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~ 320 (698)
+. ....+.++.++++|||||||.||||++ +|.++... .......+++..++++++.+|++|.+++...+.++.
T Consensus 146 -~~-~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~ 223 (511)
T PRK13391 146 -PA-TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVIR 223 (511)
T ss_pred -CC-CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHHH
Confidence 11 111234567899999999999999995 46665432 223334467788999999999999999988888999
Q ss_pred hCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHH
Q 005406 321 YGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (698)
Q Consensus 321 ~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (698)
.|+++++.+ .++..+++.++++++|++.++|+++..+.+......
T Consensus 224 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~---------------------------------- 269 (511)
T PRK13391 224 LGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVR---------------------------------- 269 (511)
T ss_pred cCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhc----------------------------------
Confidence 999999887 799999999999999999999999887764211000
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCCCccCCCCCcEEEEEe
Q 005406 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVD 478 (698)
Q Consensus 400 ~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i~d 478 (698)
.....+++|.+++||+++++++.+.+++.+|..+++.||+||+++++...... ...++++|+|+++ +++|+|
T Consensus 270 ------~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d 342 (511)
T PRK13391 270 ------DKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILD 342 (511)
T ss_pred ------ccCCccceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEEC
Confidence 00011589999999999999999999998899999999999998765443222 2456799999999 699998
Q ss_pred cCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCC-CceecCcEEEEecCCcEEEEccCCCeEecCCceeec
Q 005406 479 VPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGD-GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVA 557 (698)
Q Consensus 479 ~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~-gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~ 557 (698)
+++...+.+. .|||+++|+ ++.|||++++.+++.|..+ |||+|||+|+++++|.+++.||.||+||+ +|++|+
T Consensus 343 -~~~~~~~~g~---~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~-~G~~v~ 416 (511)
T PRK13391 343 -DDGAELPPGE---PGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIIS-GGVNIY 416 (511)
T ss_pred -CCCCCCCCCC---ceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEe-CCEEEC
Confidence 4555555544 899999999 8899999999999988655 99999999999999999999999999996 899999
Q ss_pred chHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhC
Q 005406 558 PEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEG 634 (698)
Q Consensus 558 p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~ 634 (698)
|.+||+++.+||.|.+++|++.++ ++.+++++++.++. . .+ +.+.++|+++++ .
T Consensus 417 ~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~----------~--------~~----~~~~~~l~~~~~-~ 473 (511)
T PRK13391 417 PQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGV----------D--------PG----PALAAELIAFCR-Q 473 (511)
T ss_pred HHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCC----------C--------cc----cchHHHHHHHHH-h
Confidence 999999999999999999998543 45788888876531 0 01 123456777775 7
Q ss_pred CCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 635 QLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 635 ~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.|+.|++|..|.+++++| +|++||++|+.|++.|..
T Consensus 474 ~l~~~~~P~~i~~~~~~P------~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 474 RLSRQKCPRSIDFEDELP------RLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred hcccCcCCcEEEEeecCC------CCCccceeHHHHHHHhhc
Confidence 899999999999999999 999999999999998854
No 103
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-61 Score=546.48 Aligned_cols=511 Identities=26% Similarity=0.325 Sum_probs=399.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
..++.++|+.+++++|+++|+... + +.+||.||.++++++|.+|.+ .|+++|++|+++++|+++|++++|
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 92 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINM---G------EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALF 92 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEEC---C------ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999999653 2 459999999999999999984 899999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCC--CC----------
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHL--PS---------- 224 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--~~---------- 224 (698)
||+++|++++|++|.++.+++.++++.+++++++++.+....+.+..... ..+.++......... ..
T Consensus 93 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (560)
T PRK08974 93 GILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKT-PVKHVILTRMGDQLSTAKGTLVNFVVKYI 171 (560)
T ss_pred HHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhc-CcceEEEecccccccccccccccchhhhc
Confidence 99999999999999999999999999999999999876555444433221 222222221110000 00
Q ss_pred ---CCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccccc---ccCCCc
Q 005406 225 ---LPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMV---QFYPSD 298 (698)
Q Consensus 225 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d 298 (698)
..........++.+....+...........++++++|+|||||||.||||+++|+++...+......+ ....++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~ 251 (560)
T PRK08974 172 KRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKE 251 (560)
T ss_pred ccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCcc
Confidence 00000001123333333322211222235679999999999999999999999999987665433222 234567
Q ss_pred EEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHH
Q 005406 299 IYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKL 375 (698)
Q Consensus 299 ~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l 375 (698)
.++..+|++|.+++.. .+..+..|+++++.. .++..+++.++++++|.+.++|+++..+......
T Consensus 252 ~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------ 319 (560)
T PRK08974 252 LVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEF------------ 319 (560)
T ss_pred EEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCc------------
Confidence 8899999999999766 566778888877654 5788899999999999999999999888652100
Q ss_pred HHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhccc
Q 005406 376 FTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAI 455 (698)
Q Consensus 376 ~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~ 455 (698)
.....+++|.+++||+++++.+.+.|++.+|+++++.||+||++.+++..
T Consensus 320 ------------------------------~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~ 369 (560)
T PRK08974 320 ------------------------------QELDFSSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVN 369 (560)
T ss_pred ------------------------------ccCCccceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccCceeecc
Confidence 00001479999999999999999999998899999999999998776654
Q ss_pred CCCC-CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEec
Q 005406 456 DKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP 534 (698)
Q Consensus 456 ~~~~-~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~ 534 (698)
.... ...+++|.|+++++++|+| +++..++.+. .|||+++|+.++.||+++++.+.+.| .+|||+|||+|++++
T Consensus 370 ~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~---~Gel~v~g~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~ 444 (560)
T PRK08974 370 PYDLDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGE---PGELWVKGPQVMLGYWQRPEATDEVI-KDGWLATGDIAVMDE 444 (560)
T ss_pred CCCCcccCCccccCcCCCEEEEEC-CCCCCCCCCC---ceEEEEecCCcchhhcCChhhhhhhh-hcCCcccCCEEEEcC
Confidence 4322 3467899999999999999 4556565554 89999999999999999999999988 789999999999999
Q ss_pred CCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHH
Q 005406 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLE 611 (698)
Q Consensus 535 ~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~ 611 (698)
+|.++++||.+|+|++ +|++|+|.+||+++.++|+|.+++|++.++ ++.++++++..... .+
T Consensus 445 ~g~l~i~GR~~d~i~~-~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~---------~~----- 509 (560)
T PRK08974 445 EGFLRIVDRKKDMILV-SGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDPS---------LT----- 509 (560)
T ss_pred CceEEEEecccceEEe-CCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCCCC---------CC-----
Confidence 9999999999999997 799999999999999999999999998543 34566666654311 00
Q ss_pred HhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHHHH
Q 005406 612 QLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKAIS 679 (698)
Q Consensus 612 ~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~i~ 679 (698)
.++++++++ ..|+.|++|..+++++++| +|++||++|+.|++.+.+..+
T Consensus 510 ------------~~~l~~~l~-~~l~~~~~P~~~~~~~~lP------~t~~GK~~r~~l~~~~~~~~~ 558 (560)
T PRK08974 510 ------------EEELITHCR-RHLTGYKVPKLVEFRDELP------KSNVGKILRRELRDEARAKVD 558 (560)
T ss_pred ------------HHHHHHHHH-hhcccccCCcEEEEhhhCC------CCCCCcEeHHHHHHHHHhhhc
Confidence 234555554 6789999999999999999 999999999999998776543
No 104
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-62 Score=553.39 Aligned_cols=497 Identities=24% Similarity=0.344 Sum_probs=381.6
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHH
Q 005406 75 HPEIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIV 154 (698)
Q Consensus 75 ~~~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~ 154 (698)
.++..++.++|+..++++|+..++ . ......+.+||.||+.++.++|++|+++|+++|++|+++++|+++|+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~ 90 (579)
T PRK09192 17 YADFPTLVEALDYAALGEAGMNFY-D-----RRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEA 90 (579)
T ss_pred ccchhhHHHHHHHhhccCCceEEE-e-----cCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHH
Confidence 446789999999999999876654 2 1122357899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEecCCCCC-------HHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCC
Q 005406 155 DHACSAYSYISVPLYDTLG-------PDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPS 227 (698)
Q Consensus 155 ~lA~~~~G~~~vpl~~~~~-------~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~ 227 (698)
++||+++|++++|+++.++ .+++.++++.++++++|++......+.+.....+ .++
T Consensus 91 ~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~---~~~-------------- 153 (579)
T PRK09192 91 FFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNP---LLH-------------- 153 (579)
T ss_pred HHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcccc---ccc--------------
Confidence 9999999999999987543 6899999999999999998876655544321111 111
Q ss_pred CCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc-ccccCCCcEEEEcCCh
Q 005406 228 TSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL-MVQFYPSDIYMSYLPL 306 (698)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~-~~~~~~~d~~l~~~pl 306 (698)
..++.++...... ........++++++|+|||||||.||||+++|+++++.+..... .+++.++|++++++|+
T Consensus 154 -----~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~ 227 (579)
T PRK09192 154 -----VLSHAWFKALPEA-DVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPF 227 (579)
T ss_pred -----eeehhhhcccCCC-ccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCC
Confidence 1223333222111 11222346789999999999999999999999999988877776 6888999999999999
Q ss_pred hhHHHHHH-HHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 005406 307 AHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAY 380 (698)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 380 (698)
+|.+++.. ++.++..|+++++.+ .++..+++.+.++++++++..|..+..+........
T Consensus 228 ~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~--------------- 292 (579)
T PRK09192 228 YHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKD--------------- 292 (579)
T ss_pred CCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhcccc---------------
Confidence 99999886 456788899987765 268889999999999987765554444332110000
Q ss_pred HHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC------CceecccCcchhcchhcc
Q 005406 381 NSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG------CQVMEGYGMTETSCIISA 454 (698)
Q Consensus 381 ~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g------~~l~~~YG~TE~~~~~~~ 454 (698)
.+....+++|.+++||+++++.+.+.+.+.+. ..+++.||+||+++.++.
T Consensus 293 ------------------------~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~ 348 (579)
T PRK09192 293 ------------------------LAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSF 348 (579)
T ss_pred ------------------------ccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEec
Confidence 00000148999999999999999998888763 349999999999876554
Q ss_pred cCCCC----------------------------CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCcccc
Q 005406 455 IDKGD----------------------------NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQG 506 (698)
Q Consensus 455 ~~~~~----------------------------~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~G 506 (698)
..... ...+++|.|+|+++++|+| +++..++.+. .|||+++|+++++|
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~g~---~Gel~i~g~~~~~g 424 (579)
T PRK09192 349 SPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPERV---VGHICVRGPSLMSG 424 (579)
T ss_pred cCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCCCC---EEEEEecCCchhhh
Confidence 32211 0125799999999999999 4555555554 89999999999999
Q ss_pred ccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCce--eEEEEEcCC--C
Q 005406 507 YYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVL--QCFIYGDSF--N 582 (698)
Q Consensus 507 Y~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~--~~~V~g~~~--~ 582 (698)
||++ +.+.+.|..+|||+|||+|++ ++|+++|+||+||+||+ +|++|+|.|||++|.+||+|. +|+|++.++ +
T Consensus 425 Y~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~-~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~~ 501 (579)
T PRK09192 425 YFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIII-NGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQENG 501 (579)
T ss_pred hcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEE-CCCccCHHHHHHHHHhcCCccCCcEEEEEeccCCC
Confidence 9999 677788888999999999999 99999999999999997 899999999999999999998 898888543 3
Q ss_pred CeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEec--CCCCCCCCccC
Q 005406 583 SCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMP--EPFSVENGLLT 660 (698)
Q Consensus 583 ~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~--~~p~~~~~~~T 660 (698)
+.++++|++.... ....+.+.+.+++.+. +.+++|..+.+++ ++| +|
T Consensus 502 ~~~~~~v~~~~~~---------------------~~~~~~l~~~~~~~l~----~~~~~~~~i~~~~~~~lP------~t 550 (579)
T PRK09192 502 EKIVLLVQCRISD---------------------EERRGQLIHALAALVR----SEFGVEAAVELVPPHSLP------RT 550 (579)
T ss_pred eeEEEEEEecCCC---------------------hHHHHHHHHHHHHHHH----HHhCCCceEEEeCCCCcC------CC
Confidence 5777887765421 0011223333333321 2466777777775 799 99
Q ss_pred cccCCChHHHHHHHHHH
Q 005406 661 PTFKIKRPQAKERFAKA 677 (698)
Q Consensus 661 ~~GKi~R~~l~~~~~~~ 677 (698)
++||++|++|++.|.+.
T Consensus 551 ~~GKv~R~~l~~~~~~~ 567 (579)
T PRK09192 551 SSGKLSRAKAKKRYLSG 567 (579)
T ss_pred CCcchhHHHHHHHHHcC
Confidence 99999999999988763
No 105
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.8e-62 Score=536.94 Aligned_cols=442 Identities=24% Similarity=0.322 Sum_probs=371.1
Q ss_pred HHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeE
Q 005406 86 IYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYIS 165 (698)
Q Consensus 86 ~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~ 165 (698)
...++++|+++|+... .+.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 10 ~~~a~~~~~~~a~~~~---------~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~ 80 (458)
T PRK09029 10 RHWAQVRPQAIALRLN---------DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARV 80 (458)
T ss_pred HHHHHhCCCceeeecC---------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEE
Confidence 5568899999999642 2459999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCC
Q 005406 166 VPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCS 245 (698)
Q Consensus 166 vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (698)
+|+++.++.+++.++++++++++++++.+... +.. +.... +. . .
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~-------~~~~~----------------------~~---~---~ 124 (458)
T PRK09029 81 LPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSA-------LTSLH----------------------LQ---L---V 124 (458)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhh-------ccccc----------------------cc---c---c
Confidence 99999999999999999999999998765421 100 00000 00 0 0
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEE
Q 005406 246 SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAV 325 (698)
Q Consensus 246 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~ 325 (698)
.........++++++++|||||||.||||++||++++..+......+++.++|++++.+|++|.+++...+.++..|+++
T Consensus 125 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v 204 (458)
T PRK09029 125 EGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATL 204 (458)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCceE
Confidence 00111234678999999999999999999999999999988887778899999999999999999988778889999999
Q ss_pred EEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHH
Q 005406 326 GFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKI 405 (698)
Q Consensus 326 ~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~ 405 (698)
++.+. ..+++.+ .++|.+..+|+++..+......
T Consensus 205 ~~~~~--~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~------------------------------------------ 238 (458)
T PRK09029 205 VVRDK--QPLEQAL--AGCTHASLVPTQLWRLLDNRSE------------------------------------------ 238 (458)
T ss_pred EeCCh--HHHHHHH--hhceeeecChHHHHHHHhcccc------------------------------------------
Confidence 98664 4566666 4799999999999877652100
Q ss_pred HHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCC
Q 005406 406 RERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYT 485 (698)
Q Consensus 406 ~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~ 485 (698)
..++|.+++||+++++.+.+++.. +|+++++.||+||++...+.... ....++|+|+++++++|++
T Consensus 239 ----~~~l~~i~~gG~~~~~~~~~~~~~-~g~~~~~~YG~tE~~~~~~~~~~--~~~~~~G~~~~~~~~~i~~------- 304 (458)
T PRK09029 239 ----PLSLKAVLLGGAAIPVELTEQAEQ-QGIRCWCGYGLTEMASTVCAKRA--DGLAGVGSPLPGREVKLVD------- 304 (458)
T ss_pred ----CCcceEEEECCCCCCHHHHHHHHH-cCCcEeccccccccCcceeccCC--CCCCCCCCCCCCCEEEEeC-------
Confidence 137999999999999999999886 49999999999999865543322 2235699999999999976
Q ss_pred CCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHH
Q 005406 486 SEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVY 565 (698)
Q Consensus 486 ~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l 565 (698)
|||+++|++++.||+++++.+.... .+|||+|||+|++| ||.++|.||.||+||+ +|++|+|.|||+++
T Consensus 305 --------gel~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~-~G~~v~p~eiE~~l 373 (458)
T PRK09029 305 --------GEIWLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFFS-GGEGIQPEEIERVI 373 (458)
T ss_pred --------CEEEEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEecccccceee-CCEEeCHHHHHHHH
Confidence 8999999999999999998887554 68999999999999 9999999999999997 89999999999999
Q ss_pred hcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCccee
Q 005406 566 AKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYA 642 (698)
Q Consensus 566 ~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p 642 (698)
.++|+|.+++|++.++ ++.++|+|+++... ..++|+++++ .+|+.|++|
T Consensus 374 ~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~---------------------------~~~~l~~~~~-~~l~~~~~P 425 (458)
T PRK09029 374 NQHPLVQQVFVVPVADAEFGQRPVAVVESDSEA---------------------------AVVNLAEWLQ-DKLARFQQP 425 (458)
T ss_pred hcCCCcceEEEEccCCcccCceEEEEEEcCccc---------------------------CHHHHHHHHH-hhchhccCC
Confidence 9999999999999654 46789998876311 1456677775 789999999
Q ss_pred eEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 643 KAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 643 ~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
..+++++++| +|.+||++|+.|++++++.
T Consensus 426 ~~~~~~~~~p------~t~~gKi~r~~L~~~~~~~ 454 (458)
T PRK09029 426 VAYYLLPPEL------KNGGIKISRQALKEWVAQQ 454 (458)
T ss_pred eEEEEecccc------cCcCCCcCHHHHHHHHHhc
Confidence 9999999999 9999999999999888753
No 106
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-61 Score=539.80 Aligned_cols=502 Identities=21% Similarity=0.236 Sum_probs=399.6
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
.|+.++|++.++++|+++|+.+. .+.+||.||.++++++|++|.+.|+++|++|+|+++|+++|+++++||
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~---------~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~ 73 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG---------DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGA 73 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC---------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 37899999999999999999763 246999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHH
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (698)
+++|++++|+++.++.+++.++++++++++++++......+.+....++..+.++.+++...... ....+++++
T Consensus 74 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 147 (533)
T PRK07798 74 FKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDL------LPGAVDYED 147 (533)
T ss_pred HhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCccccc------CCccccHHH
Confidence 99999999999999999999999999999999998777777666666677777777665332110 012356777
Q ss_pred HHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---------ccc------CCCcEEEEc
Q 005406 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---------VQF------YPSDIYMSY 303 (698)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---------~~~------~~~d~~l~~ 303 (698)
++...... ..... ..++.++|+|||||||.||||+++|+++...+...... ..+ ..+++++..
T Consensus 148 ~~~~~~~~-~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (533)
T PRK07798 148 ALAAGSPE-RDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPA 225 (533)
T ss_pred HHhccCCc-CCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEe
Confidence 76543321 11112 23445789999999999999999999987654432111 111 567899999
Q ss_pred CChhhHHHHHHHHHHHHhCcEEEEeC---CChhhHHHHHhhhcCcEEeechHHHHHHH-HHHHHHHhhcchHHHHHHHHH
Q 005406 304 LPLAHIYERANQIVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIY-AGITNAVKASGTLREKLFTAA 379 (698)
Q Consensus 304 ~pl~h~~~~~~~~~~l~~G~~~~~~~---~~~~~l~~~i~~~~~t~~~~~P~~~~~l~-~~~~~~~~~~~~~~~~l~~~~ 379 (698)
+|++|.+++...+.+++.|+++++.+ .++..+++.++++++|.+.++|..+...+ ..+. .
T Consensus 226 ~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~--------------- 289 (533)
T PRK07798 226 PPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-A--------------- 289 (533)
T ss_pred cchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-c---------------
Confidence 99999999998899999999999987 58999999999999999999998765432 2110 0
Q ss_pred HHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCC
Q 005406 380 YNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKG 458 (698)
Q Consensus 380 ~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~ 458 (698)
.......++|.+++||+++++++.+++.+.+ ++.+++.||+||++.+.......
T Consensus 290 -------------------------~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~ 344 (533)
T PRK07798 290 -------------------------RGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAK 344 (533)
T ss_pred -------------------------cccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCC
Confidence 0001125899999999999999999999887 78999999999997654433221
Q ss_pred CCCCCCcc--CCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhccccc---CCCceecCcEEEEe
Q 005406 459 DNLSGHVG--SPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVID---GDGWLHTGDIGLWL 533 (698)
Q Consensus 459 ~~~~~~vG--~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~---~~gw~~TGDlg~~~ 533 (698)
. ....| .+.++..++|+| +++...+.+.++ .|+|+ +++.++.|||++++.|++.|. +++||+|||+|++|
T Consensus 345 ~--~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~-~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~ 419 (533)
T PRK07798 345 G--AVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGE-IGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVE 419 (533)
T ss_pred C--CccCCCCccCCCceEEEEC-CCCCCCCCCCCC-eeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEc
Confidence 1 12344 788999999999 455555555411 26665 566899999999999998883 34699999999999
Q ss_pred cCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccH
Q 005406 534 PGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDL 610 (698)
Q Consensus 534 ~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~ 610 (698)
++|.+++.||.||+||. +|++|+|.+||+++.++|.|.+++|++.++ ++.+++++++.++. ..
T Consensus 420 ~~g~l~~~GR~~~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~--------~~----- 485 (533)
T PRK07798 420 ADGTITLLGRGSVCINT-GGEKVFPEEVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGA--------RP----- 485 (533)
T ss_pred CCCcEEEEccccceEec-CCEEeCHHHHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCC--------CC-----
Confidence 99999999999999996 899999999999999999999999998543 46788888877531 00
Q ss_pred HHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 611 EQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 611 ~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
..++|.+.++ ..|+.|++|..+++++++| +|++||++|+.|+++.++
T Consensus 486 ------------~~~~l~~~l~-~~l~~~~~P~~i~~~~~iP------~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 486 ------------DLAELRAHCR-SSLAGYKVPRAIWFVDEVQ------RSPAGKADYRWAKEQAAE 532 (533)
T ss_pred ------------CHHHHHHHHh-hhcccCCCCeEEEEcccCC------CCCcchhhHHHHhhhhcc
Confidence 1345555654 6799999999999999999 999999999999998754
No 107
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-61 Score=541.39 Aligned_cols=506 Identities=23% Similarity=0.277 Sum_probs=391.3
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
.++.+.|++.++++|+++|+... + ..+||+||.+++.++|.+|.+.|+++|++|+|+++|+++++++++||
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~---~------~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~ 88 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHG---D------RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGV 88 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEC---C------eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 57889999999999999999653 2 45999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHH
Q 005406 159 SAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQ 238 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (698)
+++|++++|++++++.+++.+++++++++.++++.+....+.+.....+..+.++ ++...... .....+...++.+
T Consensus 89 ~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~ 164 (545)
T PRK08162 89 PMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLV-IDVDDPEY---PGGRFIGALDYEA 164 (545)
T ss_pred HHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEE-EecCcccc---ccCCCcccccHHH
Confidence 9999999999999999999999999999999999887766655444444332222 22111100 0011123345666
Q ss_pred HHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHH
Q 005406 239 LQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVS 318 (698)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~ 318 (698)
+............+.+.+++++|+|||||||.||||+++|+++..........+.+..++++++.+|++|.+++...+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~ 244 (545)
T PRK08162 165 FLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTV 244 (545)
T ss_pred HhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHH
Confidence 65443221111122345689999999999999999999999987666555555677888999999999999998775544
Q ss_pred HHhCcEE-EEeCCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhh
Q 005406 319 VYYGVAV-GFYQGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (698)
Q Consensus 319 l~~G~~~-~~~~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (698)
.+.|++. .+...++..+++.++++++|++.++|+++..|.+.....
T Consensus 245 ~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--------------------------------- 291 (545)
T PRK08162 245 AARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEW--------------------------------- 291 (545)
T ss_pred HHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCcccc---------------------------------
Confidence 4445444 444479999999999999999999999999887521100
Q ss_pred HHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCC-----------CCCCCcc
Q 005406 398 DRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGD-----------NLSGHVG 466 (698)
Q Consensus 398 d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~-----------~~~~~vG 466 (698)
+..+ .+.+.+++||+++++++.+.++. +++++++.||+||+++.++.+.... ...+++|
T Consensus 292 --------~~~~-~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 361 (545)
T PRK08162 292 --------RAGI-DHPVHAMVAGAAPPAAVIAKMEE-IGFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQG 361 (545)
T ss_pred --------ccCC-ccceEEEECCCCCCHHHHHHHHH-hCCceeecccccccCcceeecccccccccCCccchhhccCCCC
Confidence 0000 24556688999999999998876 5999999999999865444332110 1134567
Q ss_pred CCCC-CcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCC
Q 005406 467 SPNP-ACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKK 545 (698)
Q Consensus 467 ~p~~-~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~ 545 (698)
.+.+ +.+++|+|++++..++.+. ...|||+++|+.++.|||++++.|...| .+|||+|||+|++|++|.++|+||.|
T Consensus 362 ~~~~~~~~~~i~d~~~~~~~~~~g-~~~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~ 439 (545)
T PRK08162 362 VRYPLQEGVTVLDPDTMQPVPADG-ETIGEIMFRGNIVMKGYLKNPKATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSK 439 (545)
T ss_pred cccCCcceEEEEcCCCCcccCCCC-CceeEEEEecCcchhhhcCChhhhHHHh-hCCCcccCceEEEcCCccEEEEeccc
Confidence 7665 3468888865555554321 0269999999999999999999999999 68999999999999999999999999
Q ss_pred CeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHH
Q 005406 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAA 622 (698)
Q Consensus 546 d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (698)
|+||+ +|++|+|.+||+++.++|+|.+++|++.+. ++.++++|++.++. ..
T Consensus 440 ~~i~~-~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~--------~~----------------- 493 (545)
T PRK08162 440 DIIIS-GGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGA--------SA----------------- 493 (545)
T ss_pred ceEEe-CCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEEEEeCCCC--------CC-----------------
Confidence 99996 899999999999999999999999998543 46788898877531 00
Q ss_pred HHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 623 VLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 623 i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
..++|+++++ ..|+.|++|..+++ .++| +|++||++|+.|++.+.+
T Consensus 494 ~~~~l~~~~~-~~l~~~~~P~~~~~-~~iP------~t~~gK~~r~~l~~~~~~ 539 (545)
T PRK08162 494 TEEEIIAHCR-EHLAGFKVPKAVVF-GELP------KTSTGKIQKFVLREQAKS 539 (545)
T ss_pred CHHHHHHHHH-HhcccccCCcEEEe-cccC------CCCCcCCcHHHHHHHHhh
Confidence 1345666665 67899999999875 6799 999999999999887654
No 108
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-61 Score=573.18 Aligned_cols=536 Identities=16% Similarity=0.206 Sum_probs=392.2
Q ss_pred hHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHHH
Q 005406 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (698)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (698)
++++--..+-+.+++.+|.++++++....+... + ..-|.. .. ..+...|+.+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--------~~~~~~--------~~-~~~~~~sl~~ 451 (994)
T PRK07868 400 AEAALALARGAADAAVAANRSVRTLAVETARTL-----------P--------RLARLG--------QI-NDHTRISLGR 451 (994)
T ss_pred HHHHHHHhhhHHHHHHHhhhhhHHHHHHHHHhh-----------h--------hHHHhh--------hc-CCCCCccHHH
Confidence 344555677788888999988888876643320 0 000000 01 1234568999
Q ss_pred HHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005406 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (698)
Q Consensus 84 ~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~ 163 (698)
+|++.++++||++|+.+. + +.+||+||+++++++|++|++.|+++|++|+|+++|+++|+++++||+++|+
T Consensus 452 ll~~~a~~~pd~~Al~~~---~------~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGa 522 (994)
T PRK07868 452 IIAEQARDAPKGEFLLFD---G------RVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGA 522 (994)
T ss_pred HHHHHHHHCCCCeEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCC
Confidence 999999999999999753 2 4599999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcC
Q 005406 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (698)
Q Consensus 164 ~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (698)
+++|++|. +++.+++++++++++|++.+....+... ...+++++.......... .......++++....
T Consensus 523 v~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~------~~~iiv~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 591 (994)
T PRK07868 523 VAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL------PGRVLVLGGGESRDLDLP--DDADVIDMEKIDPDA 591 (994)
T ss_pred EEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc------CceEEEecCCccccccCC--cchhhhhhhhcCccc
Confidence 99999985 6899999999999999987665544321 133455443211000000 000011122111110
Q ss_pred CCCC--CCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHH-HH
Q 005406 244 CSSP--QPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVS-VY 320 (698)
Q Consensus 244 ~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~-l~ 320 (698)
...+ ....+..++++++|+|| ||||.||++.++|.++..........+++.++|++++.+|++|++++...+.+ +.
T Consensus 592 ~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~ 670 (994)
T PRK07868 592 VELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVV 670 (994)
T ss_pred ccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhc
Confidence 0000 01112246899999999 58888888888887765544444455778899999999999999999876554 55
Q ss_pred hCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHH
Q 005406 321 YGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (698)
Q Consensus 321 ~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (698)
.|+++++.+ +++..+++.|+++++|+++++|+++..+.+.... ...
T Consensus 671 gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~-------------------------------~~~-- 717 (994)
T PRK07868 671 GGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAF-------------------------------VLH-- 717 (994)
T ss_pred cceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCC-------------------------------ccC--
Confidence 555565554 7999999999999999999999999888652000 000
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC-CceecccCcchhcchhcccCCCCCCCCCccCCCCCc-EEEEE
Q 005406 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG-CQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPAC-EIKLV 477 (698)
Q Consensus 400 ~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~ 477 (698)
..+++|.++ | +.+++++.+.+.+.++ ++++++||+||++..... ......+++|+|+|++ +++|.
T Consensus 718 ---------~~~slr~~~-g-~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~--~~~~~~~svG~p~pg~~~v~i~ 784 (994)
T PRK07868 718 ---------GNHPVRLFI-G-SGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLAN--VSGAKIGSKGRPLPGAGRVELA 784 (994)
T ss_pred ---------CCCceEEEe-c-CCCCHHHHHHHHHHhCchheeeeeecccccccccc--cCCCCCcccCCccCCCCceeEE
Confidence 014788776 3 3499999999998886 889999999998764432 2234568999999998 77775
Q ss_pred ec---------CCCCCCCCCCCCCccEEEEeCCCccccccCChhhhc--cccc-CCCceecCcEEEEecCCcEEEEccCC
Q 005406 478 DV---------PEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTR--EVID-GDGWLHTGDIGLWLPGGRLKIIDRKK 545 (698)
Q Consensus 478 d~---------~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~--~~f~-~~gw~~TGDlg~~~~~G~l~i~GR~~ 545 (698)
+. ++.++....++++.|||+++|+.. + +|+.+. ..|. ++|||+|||+|++|+||+|+|+||+|
T Consensus 785 ~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~d 859 (994)
T PRK07868 785 AYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRG 859 (994)
T ss_pred EecCcCCceeecCCceEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCC
Confidence 21 111211222345689999999863 3 455442 3353 58999999999999999999999999
Q ss_pred CeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC--CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHH
Q 005406 546 NIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF--NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAV 623 (698)
Q Consensus 546 d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~--~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 623 (698)
|+||+ +|++|+|.|||++|.+||.|.+|+|++.++ .+.++|+|++.++. .++
T Consensus 860 d~Ik~-~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~~~~~~a~Vv~~~~~--------~~~----------------- 913 (994)
T PRK07868 860 SVIRT-ARGPVYTEPVTDALGRIGGVDLAVTYGVEVGGRQLAVAAVTLRPGA--------AIT----------------- 913 (994)
T ss_pred CEEEe-CCceEcHHHHHHHHhcCCCeeEEEEEeecCCCCceEEEEEEeCCCC--------cCC-----------------
Confidence 99997 788999999999999999999999999654 46789999987632 011
Q ss_pred HHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHH
Q 005406 624 LAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKER 673 (698)
Q Consensus 624 ~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~ 673 (698)
.++|+++++ . |+.|++|+.|++++++| +|++||++|++|++.
T Consensus 914 ~~~L~~~l~-~-l~~y~vP~~i~~v~~lP------~T~sGKi~r~~L~~~ 955 (994)
T PRK07868 914 AADLTEALA-S-LPVGLGPDIVHVVPEIP------LSATYRPTVSALRAA 955 (994)
T ss_pred HHHHHHHHH-h-CCCCcCCeEEEEeCCCC------CCccccEehHHHHhc
Confidence 356777775 3 89999999999999999 999999999999765
No 109
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.9e-61 Score=536.99 Aligned_cols=459 Identities=15% Similarity=0.143 Sum_probs=339.1
Q ss_pred cCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccc------hHHHHhhhhcCCceeEEEEeCCC
Q 005406 145 LINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQT------LNTLLSFISEIPSVHLIVVVGGK 218 (698)
Q Consensus 145 ~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~------~~~~~~~~~~~~~~~~ii~~~~~ 218 (698)
++|++|+++++|||+++|++++|+|+.++.+++.+++++++++++|++... ...+.+.....+ .+.+++....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 79 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAP-AKAIVLPAAG 79 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhccc-ceEEEEeccC
Confidence 589999999999999999999999999999999999999999999998642 122222221112 2333332211
Q ss_pred CCCCCCCCCCCCceEeeHHHHHhcCCC------CCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccccc
Q 005406 219 DEHLPSLPSTSGVKLISYLQLQSQGCS------SPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMV 292 (698)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~ 292 (698)
.... .. ......+|+++...+.. .........++++++|+|||||||.||||++||++++.........+
T Consensus 80 ~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~ 155 (499)
T PLN03051 80 EPVA--VP--LREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHM 155 (499)
T ss_pred cccC--Cc--cccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhc
Confidence 1000 00 00012356666532211 01111123568999999999999999999999999887665555557
Q ss_pred ccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcch
Q 005406 293 QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGT 370 (698)
Q Consensus 293 ~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 370 (698)
+++++|++++.+|++|.+++...+.+++.|+++++.+ .++..+++.|+++++|++.++|+++..|.+......
T Consensus 156 ~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~----- 230 (499)
T PLN03051 156 DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAM----- 230 (499)
T ss_pred CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcccc-----
Confidence 7889999999999999999877788899999999886 478899999999999999999999988865210000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh--CCceecccCcchh
Q 005406 371 LREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTET 448 (698)
Q Consensus 371 ~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~--g~~l~~~YG~TE~ 448 (698)
.....++||.+++||+++++++.+++++.+ +++++++||+||+
T Consensus 231 -----------------------------------~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~ 275 (499)
T PLN03051 231 -----------------------------------EGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTEL 275 (499)
T ss_pred -----------------------------------ccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccc
Confidence 000014899999999999999998877633 4789999999998
Q ss_pred cchhcccCC-CCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCc--cccccCChhhhcccccC-----
Q 005406 449 SCIISAIDK-GDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIV--FQGYYKNEVQTREVIDG----- 520 (698)
Q Consensus 449 ~~~~~~~~~-~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~--~~GY~~~~~~t~~~f~~----- 520 (698)
+..++.... .....+++|+|.++++++|+| ++++.++.++ +..|||+++||.+ +.|||+++ .++..+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~-~~~Gel~v~g~~~~~~~gy~~~~-~~~~~~~g~~~~~ 352 (499)
T PLN03051 276 ASGYISSTLLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQ-PCVGEVALAPPMLGASDRLLNAD-HDKVYYKGMPMYG 352 (499)
T ss_pred cceeecccccCCCCCccccCCCCCceEEEEC-CCCCCCCCCC-CcceEEEEecCcCCCCccccCCc-ccceeeecCCccc
Confidence 754332222 223567899999999999999 5556555542 1379999999976 58999865 34433322
Q ss_pred ---CCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhc-CcCceeEEEEEcCC---C-CeEEEEE---
Q 005406 521 ---DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAK-CKFVLQCFIYGDSF---N-SCLVAIV--- 589 (698)
Q Consensus 521 ---~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~-~p~V~~~~V~g~~~---~-~~~va~v--- 589 (698)
.+||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|.+ ||+|.+|+|+|.++ + +.++|+|
T Consensus 353 ~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~-~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~ 431 (499)
T PLN03051 353 SKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNL-GGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLG 431 (499)
T ss_pred cCCcceeecCCeEEECCCCcEEEEeccCCEEee-CCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcc
Confidence 127899999999999999999999999996 8999999999999986 99999999998654 3 4688888
Q ss_pred EcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHH
Q 005406 590 AVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQ 669 (698)
Q Consensus 590 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~ 669 (698)
+++++.. .. .. +.+.+.+++.++ .+|+.+++|..|++++++| +|++||++|++
T Consensus 432 v~~~~~~-------~~---------~~----~~l~~~~~~~l~-~~l~~~~~~~~i~~v~~lP------~t~~GKi~r~~ 484 (499)
T PLN03051 432 EEKKGFD-------QA---------RP----EALQKKFQEAIQ-TNLNPLFKVSRVKIVPELP------RNASNKLLRRV 484 (499)
T ss_pred eeccccc-------cc---------ch----HHHHHHHHHHHH-hhcCCccCCceEEEcCCCC------CCCCccHHHHH
Confidence 6654210 00 11 233444555543 5688877777899999999 99999999999
Q ss_pred HHHHHHHHHH
Q 005406 670 AKERFAKAIS 679 (698)
Q Consensus 670 l~~~~~~~i~ 679 (698)
|++.+.+.+.
T Consensus 485 L~~~~~~~~~ 494 (499)
T PLN03051 485 LRDQLKKELS 494 (499)
T ss_pred HHHHHHHhhc
Confidence 9987766543
No 110
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-61 Score=544.85 Aligned_cols=504 Identities=19% Similarity=0.222 Sum_probs=369.8
Q ss_pred CHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHH
Q 005406 80 TLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACS 159 (698)
Q Consensus 80 tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~ 159 (698)
++.++|++++..+|+++|+.+........+..+.+||+||.+++.++|++|.+.| .+||+|+|+++|+++|++++|||+
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~ 80 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGAL 80 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHH
Confidence 6789999999999999999865110011123578999999999999999999999 689999999999999999999999
Q ss_pred hcCCeEEecCC---CCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCC--ceeEEEEeCCCCCCCCCCCCCCCceEe
Q 005406 160 AYSYISVPLYD---TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIP--SVHLIVVVGGKDEHLPSLPSTSGVKLI 234 (698)
Q Consensus 160 ~~G~~~vpl~~---~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~ii~~~~~~~~~~~~~~~~~~~~~ 234 (698)
++|++++|+++ .++.+++.++++++++++++++.+....+........ ....++.++..
T Consensus 81 ~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 144 (578)
T PRK05850 81 QAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL---------------- 144 (578)
T ss_pred HcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc----------------
Confidence 99999999997 5578999999999999999999876665544322111 11112221110
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc-cc-----cCCCcEEEEcCChhh
Q 005406 235 SYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM-VQ-----FYPSDIYMSYLPLAH 308 (698)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~-~~-----~~~~d~~l~~~pl~h 308 (698)
++.. ..........++++++|+|||||||.||||+++|+++++.+...... +. ...++++++++|++|
T Consensus 145 ---~~~~---~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h 218 (578)
T PRK05850 145 ---DLDS---PRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYH 218 (578)
T ss_pred ---cccc---CCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCC
Confidence 0000 00011123467899999999999999999999999998876554332 22 356889999999999
Q ss_pred HHHHHH-HHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHH-HHHHHhhcchHHHHHHHHHHH
Q 005406 309 IYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAG-ITNAVKASGTLREKLFTAAYN 381 (698)
Q Consensus 309 ~~~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~~~~~l~~~~~~ 381 (698)
.+++.. .+.+++.|+++++.+ .++..+++.+.+++++++ .+|..+..+... ....
T Consensus 219 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~----------------- 280 (578)
T PRK05850 219 DMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDD----------------- 280 (578)
T ss_pred CchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchh-----------------
Confidence 999876 778899999999886 278999999999999855 566654333221 0000
Q ss_pred HHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhC------CceecccCcchhcchhccc
Q 005406 382 SKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFG------CQVMEGYGMTETSCIISAI 455 (698)
Q Consensus 382 ~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g------~~l~~~YG~TE~~~~~~~~ 455 (698)
.......+++|.+++||+++++++.+.|.+.++ ..+++.||+||++..+...
T Consensus 281 ----------------------~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 338 (578)
T PRK05850 281 ----------------------DMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATR 338 (578)
T ss_pred ----------------------hhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheecc
Confidence 000000147999999999999999999888763 3689999999987654432
Q ss_pred CCCCC-------------------------CCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCC
Q 005406 456 DKGDN-------------------------LSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKN 510 (698)
Q Consensus 456 ~~~~~-------------------------~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~ 510 (698)
..... ....+|.|. +.+++++|.+++..++.++ .|||+++|++++.|||++
T Consensus 339 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~---~Gel~v~g~~~~~gY~~~ 414 (578)
T PRK05850 339 EPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGT---VGEIWVHGDNVAAGYWQK 414 (578)
T ss_pred CCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCC---EEEEEEecCcccccccCC
Confidence 21100 012345554 5899999966666666554 899999999999999999
Q ss_pred hhhhccccc-----------CCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEc
Q 005406 511 EVQTREVID-----------GDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGD 579 (698)
Q Consensus 511 ~~~t~~~f~-----------~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~ 579 (698)
|+.|++.|. .+|||+|||+|+++ +|+|+|+||+||+||+ +|++|+|.|||+++.+||.+. ++|++.
T Consensus 415 ~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~-~G~~i~p~eIE~~l~~~~~~~-~~v~~v 491 (578)
T PRK05850 415 PEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIV-DGRNHYPDDIEATIQEITGGR-VAAISV 491 (578)
T ss_pred hhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEE-CCeecCHHHHHHHHHHhcCCc-EEEEEe
Confidence 999999884 25799999999998 9999999999999997 899999999999999999965 667664
Q ss_pred CC--CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEec--CCCCCC
Q 005406 580 SF--NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMP--EPFSVE 655 (698)
Q Consensus 580 ~~--~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~--~~p~~~ 655 (698)
++ ++.++|+|++.+... .+ . ........+.+++.+.++. .....|..+.+++ ++|
T Consensus 492 ~~~~~~~~~a~v~~~~~~~--------~~---~----~~~~~~~~l~~~v~~~l~~---~~~~~~~~~~~~~~~~iP--- 550 (578)
T PRK05850 492 PDDGTEKLVAIIELKKRGD--------SD---E----EAMDRLRTVKREVTSAISK---SHGLSVADLVLVAPGSIP--- 550 (578)
T ss_pred cCCCceEEEEEEEeccccC--------cc---h----hhhhhHHHHHHHHHHHHHH---HhCCCceEEEEeCCCCcC---
Confidence 43 467899998775320 00 0 0001123344444443321 1112466666765 789
Q ss_pred CCccCcccCCChHHHHHHHHHH
Q 005406 656 NGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 656 ~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
+|++||++|+++++.|++.
T Consensus 551 ---~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 551 ---ITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred ---CCCCchHHHHHHHHHHHcC
Confidence 9999999999999998653
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-60 Score=532.34 Aligned_cols=478 Identities=22% Similarity=0.274 Sum_probs=388.2
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEe
Q 005406 112 KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFC 191 (698)
Q Consensus 112 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~ 191 (698)
+.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHhhhhcCC-ceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 005406 192 IPQTLNTLLSFISEIP-SVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGT 270 (698)
Q Consensus 192 ~~~~~~~~~~~~~~~~-~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~ 270 (698)
+......+.+..+..+ ..+.+++.+... .....|++....... ......++.++++|||||||.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~----~~~~~~~~~a~i~~TSGtTG~ 154 (502)
T PRK08276 90 SAALADTAAELAAELPAGVPLLLVVAGPV-----------PGFRSYEEALAAQPD----TPIADETAGADMLYSSGTTGR 154 (502)
T ss_pred ccchhhHHHHHhhhccccccEEEEeCCCC-----------CccccHHHHHhcCCC----CCCCCCCcceEEEECCCCCCC
Confidence 9877666655544444 455555543211 112345555432211 112355778999999999999
Q ss_pred cceeeechHHHHHHH------HhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-CChhhHHHHHhhhc
Q 005406 271 PKGAVLTHGNLISNV------AGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ-GDNLKLMDDLAVLK 343 (698)
Q Consensus 271 PKgV~~th~~l~~~~------~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~ 343 (698)
||||+++|.++.... ...........++++++++|++|.+++...+.++..|+++++.+ +++..+++.+++++
T Consensus 155 PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 234 (502)
T PRK08276 155 PKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYR 234 (502)
T ss_pred CceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhC
Confidence 999999987754322 11122222357889999999999999988888999999998887 78999999999999
Q ss_pred CcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCC
Q 005406 344 PTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPL 423 (698)
Q Consensus 344 ~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l 423 (698)
+|++.++|+++..+.+...... ..+| .+++|.+++||+++
T Consensus 235 ~t~~~~~P~~~~~l~~~~~~~~-----------------------------~~~~-----------~~~lr~i~~~g~~~ 274 (502)
T PRK08276 235 VTHSQLVPTMFVRMLKLPEEVR-----------------------------ARYD-----------VSSLRVAIHAAAPC 274 (502)
T ss_pred CeEEEehHHHHHHHHhCccccC-----------------------------CCCC-----------cccceEEEecCCCC
Confidence 9999999999988865210000 0011 15899999999999
Q ss_pred CHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCC
Q 005406 424 SPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPI 502 (698)
Q Consensus 424 ~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~ 502 (698)
+.++.+++.+.+|..+++.||+||++.+++..... ....+++|.|+ +++++++| +++..++.++ .|||+++|+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~---~Gel~v~~~~ 349 (502)
T PRK08276 275 PVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD-EDGNELPPGE---IGTVYFEMDG 349 (502)
T ss_pred CHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC-CCCCCCcCCC---ceEEEEECCC
Confidence 99999999998899999999999998765544322 24567899999 88999998 5566666554 8999999999
Q ss_pred ccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC-
Q 005406 503 VFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF- 581 (698)
Q Consensus 503 ~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~- 581 (698)
++.||+++++.+.+.|..+|||+|||+|+++++|.+++.||.||+||+ +|++|+|.+||.++.++|+|.+++|++..+
T Consensus 350 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~-~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~ 428 (502)
T PRK08276 350 YPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIIS-GGVNIYPQEIENLLVTHPKVADVAVFGVPDE 428 (502)
T ss_pred ccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEe-CCEEeCHHHHHHHHHhCCCcceEEEEeCCCc
Confidence 999999999999999977899999999999999999999999999996 899999999999999999999999998654
Q ss_pred --CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCcc
Q 005406 582 --NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLL 659 (698)
Q Consensus 582 --~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~ 659 (698)
++.++++|++..... .+++ ..+++.+.++ .+|+.+++|+.+++++++| +
T Consensus 429 ~~~~~~~~~v~~~~~~~------------------~~~~----~~~~i~~~~~-~~l~~~~~p~~i~~~~~lP------~ 479 (502)
T PRK08276 429 EMGERVKAVVQPADGAD------------------AGDA----LAAELIAWLR-GRLAHYKCPRSIDFEDELP------R 479 (502)
T ss_pred ccCceEEEEEEECCCCC------------------CChh----hHHHHHHHHH-hhccCCCCCcEEEEecCCC------C
Confidence 468999999875320 0111 2344555554 6899999999999999999 9
Q ss_pred CcccCCChHHHHHHHHHHHH
Q 005406 660 TPTFKIKRPQAKERFAKAIS 679 (698)
Q Consensus 660 T~~GKi~R~~l~~~~~~~i~ 679 (698)
|++||++|++|++.|...-+
T Consensus 480 t~~GKi~r~~L~~~~~~~~~ 499 (502)
T PRK08276 480 TPTGKLYKRRLRDRYWEGRQ 499 (502)
T ss_pred CcccchhHHHHHHHHHhhhh
Confidence 99999999999999876543
No 112
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.4e-61 Score=513.66 Aligned_cols=505 Identities=20% Similarity=0.274 Sum_probs=409.2
Q ss_pred HHHHHHHHh-CCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhc
Q 005406 83 DNFIYAVEN-YPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAY 161 (698)
Q Consensus 83 ~~l~~~a~~-~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~ 161 (698)
..+.++.+. .++.++++++ ....++...+||.|+.+++.++|..|.+.|+++||+|++++|+.+|++++++||.++
T Consensus 68 n~~~~~~~~~~~~~~a~~~~---~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~ 144 (626)
T KOG1175|consen 68 NCLDRHIKEKGGDKVAIIFE---GNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARI 144 (626)
T ss_pred hhhhhhhhhcCCCCcEEEEE---ecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhc
Confidence 334444443 4888998886 333333444999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHhhccceEEEecccchH---------HHHhhhhcCCc-----eeEEEEeCCCCCCCCCCCC
Q 005406 162 SYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLN---------TLLSFISEIPS-----VHLIVVVGGKDEHLPSLPS 227 (698)
Q Consensus 162 G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~---------~~~~~~~~~~~-----~~~ii~~~~~~~~~~~~~~ 227 (698)
|++.+++...+++.++...+++++++++++.+.... .+.+++..++. ...+++....
T Consensus 145 Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~--------- 215 (626)
T KOG1175|consen 145 GAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN--------- 215 (626)
T ss_pred CeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc---------
Confidence 999999999999999999999999999999764321 22222222211 1111111110
Q ss_pred CCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHH-HHHHHHhcccccccCCCcEEEEcCCh
Q 005406 228 TSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGN-LISNVAGFSLMVQFYPSDIYMSYLPL 306 (698)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~-l~~~~~~~~~~~~~~~~d~~l~~~pl 306 (698)
+...|++++..... ..+....+.+|+.+|+|||||||.||||.+++.. ++..+......++++++|+++++..+
T Consensus 216 ----~d~~~~~~~~~a~~-~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~ 290 (626)
T KOG1175|consen 216 ----RDLFWSLELKKASP-EHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDL 290 (626)
T ss_pred ----ccccHHHHhhhcCC-CCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEeccc
Confidence 12456666554433 2336667889999999999999999999999876 55556666667899999999999999
Q ss_pred hhHHHHHH-HHHHHHhCcEEEEeC---CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH
Q 005406 307 AHIYERAN-QIVSVYYGVAVGFYQ---GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNS 382 (698)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~---~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 382 (698)
.|+.+... .+.+|+.|++++++. +++..+++.+.++++|++++.|++++.+.........
T Consensus 291 GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~---------------- 354 (626)
T KOG1175|consen 291 GWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVT---------------- 354 (626)
T ss_pred CeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhcccccc----------------
Confidence 99999888 566999999999987 4889999999999999999999999987663221111
Q ss_pred HHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCC-ceecccCcchhcchhcccCCCC--
Q 005406 383 KKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGD-- 459 (698)
Q Consensus 383 k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~~~~-- 459 (698)
.++ + ++||.+.++|||++++..+++.+.++. +|++.||+||+|+.+....+..
T Consensus 355 -------------~~~----------~-~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p 410 (626)
T KOG1175|consen 355 -------------SYS----------L-KSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLP 410 (626)
T ss_pred -------------ccc----------c-ceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCC
Confidence 011 0 379999999999999999999999987 6999999999999888777766
Q ss_pred CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeC--C-CccccccCChhhhccc-c-cCCCceecCcEEEEec
Q 005406 460 NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRG--P-IVFQGYYKNEVQTREV-I-DGDGWLHTGDIGLWLP 534 (698)
Q Consensus 460 ~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g--~-~~~~GY~~~~~~t~~~-f-~~~gw~~TGDlg~~~~ 534 (698)
..+++.|.|.+++.+.|+|. +++..+... ..|||+++. | +.+++||+|++.-... | ...|+|.|||.|++|+
T Consensus 411 ~~pg~~~~p~~g~~v~i~de-~g~~~~~~~--~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~ 487 (626)
T KOG1175|consen 411 IKPGSAGKPFPGYDVQILDE-NGNELPPST--GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDE 487 (626)
T ss_pred cCccccCCCCCCcceEEECC-CCCCcCCCC--ceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcC
Confidence 78899999999999999995 555554432 389999997 3 7899999999943333 2 2389999999999999
Q ss_pred CCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHH
Q 005406 535 GGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLE 611 (698)
Q Consensus 535 ~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~ 611 (698)
||++++.||.||+|++ +|+++.+.|||+++..||.|.|++|+|.++ ++.++|||++.++.
T Consensus 488 dGY~~i~GR~DDviNv-sGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~---------------- 550 (626)
T KOG1175|consen 488 DGYYWILGRVDDVINV-SGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGS---------------- 550 (626)
T ss_pred CceEEEEecccccccc-cceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCC----------------
Confidence 9999999999999997 799999999999999999999999999664 58999999999852
Q ss_pred HhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHHH
Q 005406 612 QLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAKA 677 (698)
Q Consensus 612 ~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~~ 677 (698)
...+.+.++|+...| ..+.+|..|+.|++++++| +|.+||+.|+.|++....+
T Consensus 551 ------~~~~~L~kel~~~VR-~~igp~a~P~~I~~v~~LP------kTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 551 ------HDPEQLTKELVKHVR-SVIGPYAVPRLIVFVPGLP------KTRSGKIMRRALRKIASGK 603 (626)
T ss_pred ------CChHHHHHHHHHHHH-hhcCcccccceeEecCCCC------ccccchhHHHHHHHHhccC
Confidence 112345666666665 7899999999999999999 9999999999999988655
No 113
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.6e-60 Score=528.56 Aligned_cols=480 Identities=21% Similarity=0.266 Sum_probs=380.5
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEe
Q 005406 112 KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFC 191 (698)
Q Consensus 112 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~ 191 (698)
+.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHhhhhcCCceeEEEEeCCCCCCC-----CCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCC
Q 005406 192 IPQTLNTLLSFISEIPSVHLIVVVGGKDEHL-----PSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSG 266 (698)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSG 266 (698)
+......+.+... ....++......... .............++++..... +.....++++++++||||
T Consensus 90 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 90 HADLLHGLASALP---AGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE----PYDGPPVPQPQSMIYTSG 162 (509)
T ss_pred ccchhhhhhhhhh---cccceeecccccccccccccccccccCCCCccCHHHHhcccC----ccCCCCCCCceEEEECCC
Confidence 8776655433221 111122221110000 0000001112245665543221 122345789999999999
Q ss_pred CCCCcceeeechHHH---HHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-CChhhHHHHHhhh
Q 005406 267 TTGTPKGAVLTHGNL---ISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ-GDNLKLMDDLAVL 342 (698)
Q Consensus 267 TTG~PKgV~~th~~l---~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~-~~~~~l~~~i~~~ 342 (698)
|||.||+|+++|.+. ..........+++.+++++++.+|++|..+....+.++..|+++++.+ .++..+++.++++
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 242 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQLIERH 242 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHHHHHHc
Confidence 999999999876553 333333444577889999999999999998887777888999998877 6899999999999
Q ss_pred cCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCC
Q 005406 343 KPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASP 422 (698)
Q Consensus 343 ~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~ 422 (698)
++|.+.++|+++..+........ +....+++|.+++||++
T Consensus 243 ~~t~~~~~P~~~~~l~~~~~~~~----------------------------------------~~~~~~~l~~v~~gg~~ 282 (509)
T PRK12406 243 RITHMHMVPTMFIRLLKLPEEVR----------------------------------------AKYDVSSLRHVIHAAAP 282 (509)
T ss_pred CCeEEEccHHHHHHHHhCchhhc----------------------------------------ccCCCCceeEEEEcCCC
Confidence 99999999999988865211000 00001589999999999
Q ss_pred CCHHHHHHHHHHhCCceecccCcchhcchhcccCCC-CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCC
Q 005406 423 LSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKG-DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGP 501 (698)
Q Consensus 423 l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~-~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~ 501 (698)
+++++.+++.+.+++.+++.||+||++.+++..... ...++++|.|+++++++++| +++...+.+. .|||+++|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~---~Gel~v~~~ 358 (509)
T PRK12406 283 CPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGE---IGEIYSRIA 358 (509)
T ss_pred CCHHHHHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEEC-CCCCCCCCCC---ceEEEEECC
Confidence 999999999998899999999999998765543322 24567899999999999999 5555555554 899999999
Q ss_pred Cccc-cccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcC
Q 005406 502 IVFQ-GYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS 580 (698)
Q Consensus 502 ~~~~-GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~ 580 (698)
+++. ||+++++.+...+ .+|||+|||+|++|++|.+++.||.||+||+ +|++|+|.+||+++.++|+|.+++|++.+
T Consensus 359 ~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~-~G~~v~~~~IE~~l~~~~~v~~~~v~~~~ 436 (509)
T PRK12406 359 GNPDFTYHNKPEKRAEID-RGGFITSGDVGYLDADGYLFLCDRKRDMVIS-GGVNIYPAEIEAVLHAVPGVHDCAVFGIP 436 (509)
T ss_pred ccccccccCCchhccccc-CCCCeEEccEEEEcCCceEEEeecccceEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeee
Confidence 9875 9999999888776 7999999999999999999999999999996 89999999999999999999999999865
Q ss_pred C---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCC
Q 005406 581 F---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENG 657 (698)
Q Consensus 581 ~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~ 657 (698)
+ ++.++++|++++.. +.+ .++|++.++ ..|+.|++|..+++++++|
T Consensus 437 ~~~~~~~~~~~v~~~~~~--------~~~-----------------~~~l~~~l~-~~l~~~~~P~~i~~~~~iP----- 485 (509)
T PRK12406 437 DAEFGEALMAVVEPQPGA--------TLD-----------------EADIRAQLK-ARLAGYKVPKHIEIMAELP----- 485 (509)
T ss_pred ccccCceeEEEEEECCCC--------CCC-----------------HHHHHHHHH-HhcccCCCCcEEEEeccCC-----
Confidence 4 35688888876531 000 244555554 6789999999999999999
Q ss_pred ccCcccCCChHHHHHHHHH
Q 005406 658 LLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 658 ~~T~~GKi~R~~l~~~~~~ 676 (698)
+|++||++|++|++.|..
T Consensus 486 -~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 486 -REDSGKIFKRRLRDPYWA 503 (509)
T ss_pred -CCCccchhHHHHHHHHHh
Confidence 999999999999987754
No 114
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=4.3e-59 Score=510.66 Aligned_cols=432 Identities=22% Similarity=0.278 Sum_probs=358.1
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEeccc
Q 005406 115 TYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ 194 (698)
Q Consensus 115 Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~ 194 (698)
||+||.++++++|..|.+.|+++||+|+|+++|+++++++++||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred chHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCccee
Q 005406 195 TLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGA 274 (698)
Q Consensus 195 ~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV 274 (698)
..... + ....+.++................+++++++|||||||.||+|
T Consensus 81 ~~~~~-------------~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v 129 (436)
T TIGR01923 81 LEEKD-------------F------------------QADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKAV 129 (436)
T ss_pred ccccc-------------e------------------eecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcEE
Confidence 32100 0 0011111111111111112234578999999999999999999
Q ss_pred eechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCCChhhHHHHHhhhcCcEEeechHHH
Q 005406 275 VLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQGDNLKLMDDLAVLKPTIFPSVPRLY 354 (698)
Q Consensus 275 ~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~~~~~l~~~i~~~~~t~~~~~P~~~ 354 (698)
+++|+++...+......+++.++|++++.+|++|.+++...+.++..|+++++.+.. ..+++.++++++|++.++|+++
T Consensus 130 ~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~~~~~~l~~~~~t~~~~~P~~l 208 (436)
T TIGR01923 130 PHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-NQLLEMIANERVTHISLVPTQL 208 (436)
T ss_pred EEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH-HHHHHHHHHhCCeEEEeHHHHH
Confidence 999999999888888888999999999999999999998888899999999987643 3899999999999999999999
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHH
Q 005406 355 NRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVC 434 (698)
Q Consensus 355 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~ 434 (698)
..+.+... ...++|.+++||+++++++.++++.
T Consensus 209 ~~l~~~~~----------------------------------------------~~~~l~~~~~~G~~~~~~~~~~~~~- 241 (436)
T TIGR01923 209 NRLLDEGG----------------------------------------------HNENLRKILLGGSAIPAPLIEEAQQ- 241 (436)
T ss_pred HHHHhCcC----------------------------------------------CCCceEEEEECCCCCCHHHHHHHHH-
Confidence 88765210 0037999999999999999998876
Q ss_pred hCCceecccCcchhcchhcccCCCC-CCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhh
Q 005406 435 FGCQVMEGYGMTETSCIISAIDKGD-NLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQ 513 (698)
Q Consensus 435 ~g~~l~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~ 513 (698)
.|+.+++.||+||++..++...... ....++|.|++++++++.+.+.. ..|||+++|+.++.||+++++.
T Consensus 242 ~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~---------~~Gel~v~~~~~~~gy~~~~~~ 312 (436)
T TIGR01923 242 YGLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKVDNKE---------GHGEIMVKGANLMKGYLYQGEL 312 (436)
T ss_pred hCCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEeCCCC---------CceEEEEECCccchhhCCChhh
Confidence 5999999999999987655443322 22235999999999999542221 3799999999999999999888
Q ss_pred hcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEE
Q 005406 514 TREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVA 590 (698)
Q Consensus 514 t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv 590 (698)
+...+ .+|||+|||+|++++||.+++.||.||+||+ +|++|+|.+||.++.++|.|.+++|++.+. +..++++|+
T Consensus 313 ~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 390 (436)
T TIGR01923 313 TPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIIS-GGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIV 390 (436)
T ss_pred hhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEe-CCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEE
Confidence 87766 6899999999999999999999999999997 899999999999999999999999998654 356788888
Q ss_pred cChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHH
Q 005406 591 VDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQA 670 (698)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l 670 (698)
++++. + .+++.++++ ..|+.|++|..|++++++| +|++||++|++|
T Consensus 391 ~~~~~----------~-----------------~~~l~~~l~-~~l~~~~~p~~i~~~~~iP------~t~~GK~~r~~L 436 (436)
T TIGR01923 391 SESDI----------S-----------------QAKLIAYLT-EKLAKYKVPIAFEKLDELP------YNASGKILRNQL 436 (436)
T ss_pred ECCCC----------C-----------------HHHHHHHHH-HhhhCCCCCeEEEEecCCC------CCCCCceecccC
Confidence 76521 1 234444553 6789999999999999999 999999999875
No 115
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-58 Score=519.87 Aligned_cols=490 Identities=22% Similarity=0.291 Sum_probs=372.7
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHAC 158 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~ 158 (698)
.++.+.|...+...|+.+++... ++ .+.+||.||+++++++|++|.+.|+++||+|+|+++|+++|+++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~ 74 (545)
T PRK07768 2 SRFTEKMYANARTSPRGMVTGEP---DA----PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGL 74 (545)
T ss_pred chHHHHHHHHhhCCCcceEEecC---CC----ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 46788888999999999988654 33 367999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCCCCHHHH-------HHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCc
Q 005406 159 SAYSYISVPLYDTLGPDAV-------KYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGV 231 (698)
Q Consensus 159 ~~~G~~~vpl~~~~~~~~l-------~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 231 (698)
+++|++++|+++..+.+++ .++++.++++.+++++.....+.... . .+.
T Consensus 75 ~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~-----------------------~~~ 130 (545)
T PRK07768 75 WMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLE-E-----------------------KGI 130 (545)
T ss_pred HHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhc-c-----------------------cCC
Confidence 9999999999998876544 55678889999999765433221110 0 012
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCC-cEEEEcCChhhHH
Q 005406 232 KLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPS-DIYMSYLPLAHIY 310 (698)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~-d~~l~~~pl~h~~ 310 (698)
.++.++++..... .......++++++|+|||||||.||||+++|+++...+......+++.++ |++++.+|++|.+
T Consensus 131 ~~~~~~~l~~~~~---~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 207 (545)
T PRK07768 131 RVLTVADLLAADP---IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDM 207 (545)
T ss_pred ceeehhhhcccCC---CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccch
Confidence 2345556554221 12234567999999999999999999999999999988877777777776 8999999999999
Q ss_pred HHHH-HHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005406 311 ERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (698)
Q Consensus 311 ~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (698)
++.. .+.++..|+++++.+ .++..+.+.+++++++++.++|.++..+...+......
T Consensus 208 g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------------- 270 (545)
T PRK07768 208 GMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKP----------------- 270 (545)
T ss_pred HHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccc-----------------
Confidence 9886 556799999998876 27788899999999999988887776665422110000
Q ss_pred HHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHH---hCC---ceecccCcchhcchhcccCCC
Q 005406 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVC---FGC---QVMEGYGMTETSCIISAIDKG 458 (698)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~---~g~---~l~~~YG~TE~~~~~~~~~~~ 458 (698)
..++ .+++|.+++||+++++.+.+.+.+. +|. .+++.||+||++..++.....
T Consensus 271 ----------~~~~-----------~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~ 329 (545)
T PRK07768 271 ----------GAFD-----------LSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCG 329 (545)
T ss_pred ----------cCCC-----------chheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCC
Confidence 0001 1489999999999999999988764 555 499999999998755433221
Q ss_pred --------------------------CCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChh
Q 005406 459 --------------------------DNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEV 512 (698)
Q Consensus 459 --------------------------~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~ 512 (698)
....+++|+|+++++++|+| +++...+.++ .|||+++|+.++.||++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~---~Gel~v~~~~~~~gy~~~~~ 405 (545)
T PRK07768 330 AGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRG---VGVIELRGESVTPGYLTMDG 405 (545)
T ss_pred CCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCC---EEEEEEccCcccccccCCCC
Confidence 11346899999999999999 6666665554 89999999999999998655
Q ss_pred hhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcC--C---CCeEEE
Q 005406 513 QTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS--F---NSCLVA 587 (698)
Q Consensus 513 ~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~--~---~~~~va 587 (698)
... .++.+|||+|||+|+++++|.++++||.||+||+ +|++|+|.+||+.+.++|+|.+++|++.. + ++.++.
T Consensus 406 ~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~ 483 (545)
T PRK07768 406 FIP-AQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIM-AGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAV 483 (545)
T ss_pred Ccc-cccCCCeeeccceEEEecCCEEEEEccccceEEE-CCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEE
Confidence 443 4447899999999999999999999999999998 79999999999999999999998777532 1 223444
Q ss_pred EEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEec--CCCCCCCCccCcccCC
Q 005406 588 IVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMP--EPFSVENGLLTPTFKI 665 (698)
Q Consensus 588 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~--~~p~~~~~~~T~~GKi 665 (698)
++.+.... +......+.+.+++.+. ..+. .+|..+.+++ ++| +|++||+
T Consensus 484 ~v~~~~~~--------------------~~~~~~~l~~~~~~~l~-~~~~--~~p~~v~~v~~~~lP------~t~~GKi 534 (545)
T PRK07768 484 AVESNAFE--------------------DPAEVRRIRHQVAHEVV-AEVG--VRPRNVVVLGPGSIP------KTPSGKL 534 (545)
T ss_pred EEEecccc--------------------cHHHHHHHHHHHHHHHH-HHhC--CCccEEEEeCCCcCC------CCCchhH
Confidence 44433211 11111122333333221 1111 4677888886 799 9999999
Q ss_pred ChHHHHHHHH
Q 005406 666 KRPQAKERFA 675 (698)
Q Consensus 666 ~R~~l~~~~~ 675 (698)
+|+.+++.|.
T Consensus 535 ~r~~l~~~~~ 544 (545)
T PRK07768 535 RRANAAELVT 544 (545)
T ss_pred HHHHHHHhcC
Confidence 9999998874
No 116
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.9e-57 Score=488.97 Aligned_cols=396 Identities=15% Similarity=0.167 Sum_probs=336.6
Q ss_pred eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEe
Q 005406 112 KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFC 191 (698)
Q Consensus 112 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~ 191 (698)
+.+||+||.++++++|+.|. .|+++|++|+|+++|+++|+++++||+++|++++|+++..+.+++..++++++++++++
T Consensus 7 ~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 85 (414)
T PRK08308 7 EEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLY 85 (414)
T ss_pred ceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEe
Confidence 46999999999999999985 68999999999999999999999999999999999999999999999999999999998
Q ss_pred cccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCc
Q 005406 192 IPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTP 271 (698)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~P 271 (698)
+..... . . ......++++++|+|||||||.|
T Consensus 86 ~~~~~~----------------~-------------------~--------------~~~~~~~~~~~~i~~TSGtTG~P 116 (414)
T PRK08308 86 GESDFT----------------K-------------------L--------------EAVNYLAEEPSLLQYSSGTTGEP 116 (414)
T ss_pred cCcccc----------------c-------------------c--------------cCCCCCCCCceEEEECCCCCCCC
Confidence 652100 0 0 00123568899999999999999
Q ss_pred ceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEee
Q 005406 272 KGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPS 349 (698)
Q Consensus 272 KgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~ 349 (698)
|||++||+++.+.+......+++..+|+++..+|++|.+++.. .+.++..|+++++.+ .++..+++.++++++|++++
T Consensus 117 Kgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~ 196 (414)
T PRK08308 117 KLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYA 196 (414)
T ss_pred cEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEc
Confidence 9999999999998887777788889999999999999999865 677899999998877 78999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHH
Q 005406 350 VPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMD 429 (698)
Q Consensus 350 ~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~ 429 (698)
+|+++..+.+.... ..+++.+++||+++++++.+
T Consensus 197 ~P~~~~~l~~~~~~----------------------------------------------~~~l~~~~~~G~~l~~~~~~ 230 (414)
T PRK08308 197 VPLMLHILGRLLPG----------------------------------------------TFQFHAVMTSGTPLPEAWFY 230 (414)
T ss_pred CHHHHHHHHhcCCc----------------------------------------------cccccEEEEccCCCCHHHHH
Confidence 99999888652100 02678899999999999999
Q ss_pred HHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccC
Q 005406 430 FLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYK 509 (698)
Q Consensus 430 ~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~ 509 (698)
.+++. +.++++.||+||++.+... ......+++|+|+|++++++.+. .+ ..|||++++
T Consensus 231 ~~~~~-~~~~~~~YG~tE~~~~~~~--~~~~~~~~~G~p~~~~~~~~~~~-------~~---~~gel~v~~--------- 288 (414)
T PRK08308 231 KLRER-TTYMMQQYGCSEAGCVSIC--PDMKSHLDLGNPLPHVSVSAGSD-------EN---APEEIVVKM--------- 288 (414)
T ss_pred HHHHh-CChhhhccCccccCCeeec--CCCCCCCccCccCCCeEEEEecC-------CC---CCceEEEEc---------
Confidence 99876 6789999999999864432 22345678999999999998752 12 379999975
Q ss_pred ChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEE
Q 005406 510 NEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLV 586 (698)
Q Consensus 510 ~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~v 586 (698)
.++||+|||+|++|+||+++|+||.||+||+ +|++|+|.+||+++.++|+|.+|+|++.++ ++.++
T Consensus 289 ----------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~-~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~ 357 (414)
T PRK08308 289 ----------GDKEIFTKDLGYKSERGTLHFMGRMDDVINV-SGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVK 357 (414)
T ss_pred ----------CCceEECCceEEECCCccEEEecccCCeEEE-CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEE
Confidence 3689999999999999999999999999997 899999999999999999999999998554 46788
Q ss_pred EEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCC
Q 005406 587 AIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIK 666 (698)
Q Consensus 587 a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~ 666 (698)
++++.+.. .+ .++++++++ .+|+.|++|..+++++++| +|++||++
T Consensus 358 ~~v~~~~~----------~~-----------------~~~l~~~l~-~~l~~~~~P~~i~~v~~iP------~t~~GKi~ 403 (414)
T PRK08308 358 AKVISHEE----------ID-----------------PVQLREWCI-QHLAPYQVPHEIESVTEIP------KNANGKVS 403 (414)
T ss_pred EEEEeCCC----------CC-----------------HHHHHHHHH-HhCccccCCcEEEEeccCC------CCCCcCee
Confidence 88886542 11 244555664 6899999999999999999 99999999
Q ss_pred hHHH
Q 005406 667 RPQA 670 (698)
Q Consensus 667 R~~l 670 (698)
|+.|
T Consensus 404 r~~~ 407 (414)
T PRK08308 404 RKLL 407 (414)
T ss_pred hhhh
Confidence 9954
No 117
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=7.3e-58 Score=497.93 Aligned_cols=401 Identities=30% Similarity=0.472 Sum_probs=320.0
Q ss_pred HHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCe
Q 005406 85 FIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYI 164 (698)
Q Consensus 85 l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~ 164 (698)
|+++|+++||++|+++ +..+++||+||+++++++|.+|.+.|+++|++|+|+++|+++|+++++||+++|++
T Consensus 1 f~~~a~~~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~ 72 (417)
T PF00501_consen 1 FERQAQRYPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAI 72 (417)
T ss_dssp HHHHHHHSTTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-E
T ss_pred ChhHHhhCCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccc
Confidence 6899999999999976 22478999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHhhccceEEEe----cccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHH
Q 005406 165 SVPLYDTLGPDAVKYVVNHAEIEAIFC----IPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQ 240 (698)
Q Consensus 165 ~vpl~~~~~~~~l~~il~~~~~~~v~~----~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (698)
++|++|.++.+++.+++++++++++|+ +......+............++.++..... ..+.+.
T Consensus 73 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 139 (417)
T PF00501_consen 73 PVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLP-------------KKEALK 139 (417)
T ss_dssp EEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCT-------------TCHHHH
T ss_pred ccccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccc-------------cccccc
Confidence 999999999999999999999999997 222233333443333344555655532210 001111
Q ss_pred hcCCCCCCCCCC-CCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcc--cccccCCCcEEEEcCChhhHHHH-HHHH
Q 005406 241 SQGCSSPQPFCP-PKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFS--LMVQFYPSDIYMSYLPLAHIYER-ANQI 316 (698)
Q Consensus 241 ~~~~~~~~~~~~-~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~--~~~~~~~~d~~l~~~pl~h~~~~-~~~~ 316 (698)
......... .+ ..++++++++|||||||.||+|+++|+++++.+..+. ...+++ |++++++|++|.+++ ...+
T Consensus 140 ~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~ 216 (417)
T PF00501_consen 140 SASLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALL 216 (417)
T ss_dssp HHHHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHH
T ss_pred ccccccccc-cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccccc
Confidence 000000000 00 0579999999999999999999999999999877754 123333 699999999999999 6688
Q ss_pred HHHHhCcEEEEeCCC----hhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCC
Q 005406 317 VSVYYGVAVGFYQGD----NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQT 392 (698)
Q Consensus 317 ~~l~~G~~~~~~~~~----~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~ 392 (698)
.+++.|+++++.+.. +..+++.+++++||+++++|+++..+.+..... ..
T Consensus 217 ~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~-~~------------------------- 270 (417)
T PF00501_consen 217 AALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEK-TK------------------------- 270 (417)
T ss_dssp HHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT-HH-------------------------
T ss_pred ccccccccccccccccccccccchhccccccccccccccccccccccccccc-cc-------------------------
Confidence 999999999999842 467899999999999999999999997621111 00
Q ss_pred CchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCC-ceecccCcchhcchhcccCCCC--CCCCCccCCC
Q 005406 393 PSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGD--NLSGHVGSPN 469 (698)
Q Consensus 393 ~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~~~~--~~~~~vG~p~ 469 (698)
......+++|.+++||+++++++.+++++.++. ++++.||+||++.+++...... ...+++|.|+
T Consensus 271 ------------~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~ 338 (417)
T PF00501_consen 271 ------------ISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPL 338 (417)
T ss_dssp ------------GTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEES
T ss_pred ------------ccccccccccccccccccCChhhccccccccccccceecccccccceeeecccccccccccccccccc
Confidence 000011469999999999999999999999987 9999999999999887653222 4678999999
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEe
Q 005406 470 PACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 549 (698)
Q Consensus 470 ~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ik 549 (698)
++++++|+|.+++.+++.++ .|||+|+||+++.||+++|+.|.+.|+++|||+|||+|++|+||+|+++||.||+||
T Consensus 339 ~~~~~~ivd~~~~~~~~~g~---~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~ 415 (417)
T PF00501_consen 339 PGVEVKIVDPNTGEPLPPGE---PGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIK 415 (417)
T ss_dssp TTEEEEEECTTTSSBESTTS---EEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEE
T ss_pred cccccccccccccccccccc---cccccccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEE
Confidence 99999999977688777666 899999999999999999999999997668999999999999999999999999999
Q ss_pred c
Q 005406 550 L 550 (698)
Q Consensus 550 l 550 (698)
+
T Consensus 416 ~ 416 (417)
T PF00501_consen 416 V 416 (417)
T ss_dssp E
T ss_pred e
Confidence 6
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=8.4e-55 Score=443.97 Aligned_cols=501 Identities=23% Similarity=0.276 Sum_probs=388.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
...|++++|..+++++|+++|+++. ++.+.+||+|++++++++|+.|+..|++.||.|+++|+|++|++.++|
T Consensus 75 ~~~ti~~~F~~~vrr~p~k~aii~~-------~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWl 147 (649)
T KOG1179|consen 75 ERRTIAELFLSQVRRQPDKPAIIYE-------GPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWL 147 (649)
T ss_pred cCCcHHHHHHHHHHhCCCccEEEEe-------CCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHH
Confidence 4678999999999999999999986 224679999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCce-eEEEEeCCCCCCCCCCCCCCCceEee
Q 005406 157 ACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSV-HLIVVVGGKDEHLPSLPSTSGVKLIS 235 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~ii~~~~~~~~~~~~~~~~~~~~~~ 235 (698)
+.+++|++...||+++..+.+.|.++-++++++|++.+....+.++.+.+... -.++..+..... . .+.+
T Consensus 148 GLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~-------~--g~~~ 218 (649)
T KOG1179|consen 148 GLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVP-------D--GIES 218 (649)
T ss_pred hHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCC-------c--hHHH
Confidence 99999999999999999999999999999999999999888887774433221 112222221110 1 1123
Q ss_pred HHHHHhcCCCCCCC---CCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHH
Q 005406 236 YLQLQSQGCSSPQP---FCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYER 312 (698)
Q Consensus 236 ~~~~~~~~~~~~~~---~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~ 312 (698)
+...++.....+.+ ....+-.++++.+|||||||.||..++||.............++++++|+++..+|++|..+.
T Consensus 219 L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ 298 (649)
T KOG1179|consen 219 LLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAG 298 (649)
T ss_pred HHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHH
Confidence 33333333333322 233456789999999999999999999999998887777778999999999999999999998
Q ss_pred HH-HHHHHHhCcEEEEeC-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcC
Q 005406 313 AN-QIVSVYYGVAVGFYQ-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSG 390 (698)
Q Consensus 313 ~~-~~~~l~~G~~~~~~~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~ 390 (698)
+. +..++..|+|+++-. ++...++++..++++|++.-+-.+.+-|++..
T Consensus 299 ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p----------------------------- 349 (649)
T KOG1179|consen 299 ILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQP----------------------------- 349 (649)
T ss_pred HHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCC-----------------------------
Confidence 87 567899999999987 89999999999999999998888887776521
Q ss_pred CCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHhCCc-eecccCcchhcchhcccCCCCCCCCCccCC-
Q 005406 391 QTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQ-VMEGYGMTETSCIISAIDKGDNLSGHVGSP- 468 (698)
Q Consensus 391 ~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~-l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p- 468 (698)
+++ .+ -..++|.++ |--+.+++++.|.++||.. |.+.||+||+....+.. +.+.|.+|+.
T Consensus 350 --~~~-~e----------r~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~---d~~vGA~G~~~ 411 (649)
T KOG1179|consen 350 --PSP-EE----------RQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNY---DGRVGACGFMS 411 (649)
T ss_pred --CCh-hh----------cCceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeee---cCccccccchh
Confidence 110 00 114788766 4458899999999999866 99999999987654433 3344444442
Q ss_pred -----CCCcEEEEEecCCCC-------CCCCCCCCCccEEEEe--CCCc---cccccCChhhhcccc------cCCCcee
Q 005406 469 -----NPACEIKLVDVPEMN-------YTSEDQPHPRGEICVR--GPIV---FQGYYKNEVQTREVI------DGDGWLH 525 (698)
Q Consensus 469 -----~~~~~v~i~d~~~~~-------~~~~~~~~~~GEl~v~--g~~~---~~GY~~~~~~t~~~f------~~~gw~~ 525 (698)
+--+++--+|+++++ .+...+||+.|.+.-+ -..- |.||.+..++|++.. .+|-||.
T Consensus 412 ~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~ 491 (649)
T KOG1179|consen 412 RLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFN 491 (649)
T ss_pred hhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEe
Confidence 122333333444443 3444556677865322 2233 899999888887664 4566999
Q ss_pred cCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcC--C--CCeEEEEEEcChhHHHHHHH
Q 005406 526 TGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDS--F--NSCLVAIVAVDPDVLKDWAA 601 (698)
Q Consensus 526 TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~--~--~~~~va~vv~~~~~~~~~~~ 601 (698)
|||+-.+|+.|+|||.||..|.+.. .||||+..|||.+|..+.++.|+.|+|.. . +..-.|.|+.+++.
T Consensus 492 tGDlLv~D~~GylYF~DRtGDTFRW-KGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~------ 564 (649)
T KOG1179|consen 492 TGDLLVADELGYLYFKDRTGDTFRW-KGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTT------ 564 (649)
T ss_pred eCcEEEEecCCcEEEeccCCCceee-cCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcc------
Confidence 9999999999999999999999997 89999999999999999999999999943 2 34456666655532
Q ss_pred HcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHH
Q 005406 602 SQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKER 673 (698)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~ 673 (698)
+...+.+-..++ ..||+|.+|..+.+.+++. +|.|.|.++..|.+.
T Consensus 565 -------------------~~d~~~l~~~l~-~~LP~YA~P~FlRl~~~i~------~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 565 -------------------EKDLEKLYQHLR-ENLPSYARPRFLRLQDEIE------KTGTFKLQKTELQKE 610 (649)
T ss_pred -------------------cchHHHHHHHHH-hhCccccchHHHHHHhhhh------cccchhhHHHHHHHc
Confidence 111344444443 7899999999999999999 999999999999874
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.1e-53 Score=463.79 Aligned_cols=389 Identities=22% Similarity=0.308 Sum_probs=325.0
Q ss_pred eHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecc
Q 005406 115 TYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIP 193 (698)
Q Consensus 115 Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~ 193 (698)
||.||.+.++++|++|.+ .|+++||+|+++++|+++++++++||++.|++++|+++.++.+.+.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999988
Q ss_pred cchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcce
Q 005406 194 QTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKG 273 (698)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKg 273 (698)
.....+..... .++..... +..................++++++++|||||||.||+
T Consensus 81 ~~~~~~~~~~~------~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~ 137 (408)
T TIGR01733 81 ALASRLAGLVL------PIILVDPL-----------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKG 137 (408)
T ss_pred chhhhccccCC------ceEEechh-----------------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCCE
Confidence 76544322110 11111110 00000000000011111457899999999999999999
Q ss_pred eeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeCC----ChhhHHHHHhhhcCcEEee
Q 005406 274 AVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQG----DNLKLMDDLAVLKPTIFPS 349 (698)
Q Consensus 274 V~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~~----~~~~l~~~i~~~~~t~~~~ 349 (698)
|.+||++++..+......+.+.++|++++.+|++|.+++...+.++..|+++++.+. .+..+.+.++++++|.+.+
T Consensus 138 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~ 217 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNL 217 (408)
T ss_pred EEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEe
Confidence 999999999998888878888899999999999999999889999999999998873 2678888999999999999
Q ss_pred chHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHH
Q 005406 350 VPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMD 429 (698)
Q Consensus 350 ~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~ 429 (698)
+|.+++.+.+... ....++|.+++||+++++++.+
T Consensus 218 ~p~~~~~l~~~~~---------------------------------------------~~~~~l~~v~~~g~~~~~~~~~ 252 (408)
T TIGR01733 218 TPSLLALLAAALP---------------------------------------------PALASLRLVILGGEALTPALVD 252 (408)
T ss_pred CHHHHHHHHHhhh---------------------------------------------hcccCceEEEEeCccCCHHHHH
Confidence 9999999876421 0115899999999999999999
Q ss_pred HHHHHhC-CceecccCcchhcchhcccCCCC---C--CCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCc
Q 005406 430 FLKVCFG-CQVMEGYGMTETSCIISAIDKGD---N--LSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIV 503 (698)
Q Consensus 430 ~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~~---~--~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~ 503 (698)
++.+.++ +.+++.||+||++.++....... . ..+++|.|+++++++|+|++ +..++.++ .|||+++|+++
T Consensus 253 ~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~-~~~~~~g~---~Gel~v~~~~~ 328 (408)
T TIGR01733 253 RWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDDD-LRPVPVGV---VGELYIGGPGV 328 (408)
T ss_pred HHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECCC-CCCCCCCC---ceEEEecCccc
Confidence 9999887 89999999999988765332222 1 26789999999999999954 66665554 89999999999
Q ss_pred cccccCChhhhcccccCC------C--ceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEE
Q 005406 504 FQGYYKNEVQTREVIDGD------G--WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCF 575 (698)
Q Consensus 504 ~~GY~~~~~~t~~~f~~~------g--w~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~ 575 (698)
+.||+++++.|.+.|..+ | ||+|||+|++|++|.+++.||.||+|++ +|++|+|.+||+++..+|.|.+|+
T Consensus 329 ~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~ 407 (408)
T TIGR01733 329 ARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKI-RGYRIELGEIEAALLRHPGVREAV 407 (408)
T ss_pred cccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEe-CeEEechHHHHHHHhcCcchhhhc
Confidence 999999999999887432 3 9999999999999999999999999997 899999999999999999999987
Q ss_pred E
Q 005406 576 I 576 (698)
Q Consensus 576 V 576 (698)
|
T Consensus 408 v 408 (408)
T TIGR01733 408 V 408 (408)
T ss_pred C
Confidence 5
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-47 Score=408.80 Aligned_cols=317 Identities=26% Similarity=0.303 Sum_probs=263.3
Q ss_pred CCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC---
Q 005406 253 PKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--- 329 (698)
Q Consensus 253 ~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--- 329 (698)
..++++++|+|||||||.||||+++|+++.+.+......+ ...++++..+|++|.+++...+.+++.|++++++.
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 4578999999999999999999999999988877654433 35678999999999999988888999999988733
Q ss_pred -CChhhHHHHHhhhc--CcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHH
Q 005406 330 -GDNLKLMDDLAVLK--PTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIR 406 (698)
Q Consensus 330 -~~~~~l~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~ 406 (698)
+++..+++.+++++ .++...+|..+..+......
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~------------------------------------------- 146 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA------------------------------------------- 146 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-------------------------------------------
Confidence 68999999999998 45666788777655431000
Q ss_pred HHcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCC
Q 005406 407 ERLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTS 486 (698)
Q Consensus 407 ~~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~ 486 (698)
.....++|.+++||+++++++.+++.+ +++++++.||+||++..+. ..|.|++++++++.+
T Consensus 147 ~~~~~~l~~i~~gG~~l~~~~~~~~~~-~~~~v~~~YG~TE~~~~~~----------~~G~~~~g~~v~i~~-------- 207 (358)
T PRK07824 147 TAALAELDAVLVGGGPAPAPVLDAAAA-AGINVVRTYGMSETSGGCV----------YDGVPLDGVRVRVED-------- 207 (358)
T ss_pred cCCcccceEEEECCCCCCHHHHHHHHh-cCCcEEecccCCccCCCcC----------cCceeCCCCEEEecC--------
Confidence 000148999999999999999998876 5999999999999875432 368999999999843
Q ss_pred CCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHh
Q 005406 487 EDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYA 566 (698)
Q Consensus 487 ~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~ 566 (698)
|||+++|+.++.||+++++.+ .|..+|||+|||+|++ ++|.++|+||.||+||+ +|++|+|.+||+++.
T Consensus 208 -------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~-~G~~v~p~eIE~~l~ 276 (358)
T PRK07824 208 -------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAIST-GGLTVLPQVVEAALA 276 (358)
T ss_pred -------CEEEEecCccccccCCCcccc--cccCCCceecccEEEE-eCCEEEEEeccCCeEEE-CCEEECHHHHHHHHH
Confidence 999999999999999998754 4557889999999999 89999999999999997 899999999999999
Q ss_pred cCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceee
Q 005406 567 KCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAK 643 (698)
Q Consensus 567 ~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~ 643 (698)
+||+|.+|+|++.++ ++.++++++.+... ....++|+++++ +.|+.|++|.
T Consensus 277 ~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~-------------------------~~~~~~i~~~~~-~~l~~~~~P~ 330 (358)
T PRK07824 277 THPAVADCAVFGLPDDRLGQRVVAAVVGDGGP-------------------------APTLEALRAHVA-RTLDRTAAPR 330 (358)
T ss_pred hCCCcceEEEEecCCCCCceEEEEEEEeCCCC-------------------------CcCHHHHHHHHH-hhCccccCCC
Confidence 999999999999543 46788888765421 011455666664 6899999999
Q ss_pred EEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 644 AVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 644 ~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
.|++++++| +|++||++|++|++.|.+
T Consensus 331 ~i~~v~~lP------~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 331 ELHVVDELP------RRGIGKVDRRALVRRFAG 357 (358)
T ss_pred EEEEecCCC------CCCCccccHHHHHHHhhc
Confidence 999999999 999999999999998864
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.8e-44 Score=408.38 Aligned_cols=454 Identities=19% Similarity=0.180 Sum_probs=365.0
Q ss_pred hHHHhhhHHHhhhccccCCCCCccccCCCCccccccCCCceEEcCCCCCCCcCcccccCCCCccccccCCCCCCCCCHHH
Q 005406 4 SSAQRRFKAVQRHLTSTNTDRCSQLDYNHTTGCFVQSQGYSVRLPEKLQTGKWNVYRSARSPLTLVDRFPDHPEIGTLHD 83 (698)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~tl~~ 83 (698)
..+.++|.+.+.++..+|...++++++...... . . .| . ...+.+...++++
T Consensus 181 ~~~~~~~~~~l~~~~~~~~~~~~~l~ll~~~e~-----------------~---~-~~-----~---~~~~~~~~~~i~~ 231 (642)
T COG1020 181 ERELRHFLQLLAALADAPRTSLSALPLLLPSER-----------------E---V-WN-----A---LAAPIPLRLTIHL 231 (642)
T ss_pred HHHHHHHHHHHHHHHhCcccCcccCCCCCHHHH-----------------h---h-cc-----c---cccCCCccchHHH
Confidence 567889999999999999977888877764420 0 0 00 0 0112334578999
Q ss_pred HHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005406 84 NFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (698)
Q Consensus 84 ~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~ 163 (698)
.|...+.+.|++.|+... ...+||+|+..+++++|+.|.+.|+++++.|+++.+++.++++.++|++++|+
T Consensus 232 ~f~~~a~~~p~~~a~~~~---------~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~ 302 (642)
T COG1020 232 LFEEQAATTPDAVALVRG---------GQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGA 302 (642)
T ss_pred HHHHHHHhCCCceeEecC---------CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCC
Confidence 999999999999888542 24599999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCceEeeHHHHHhcC
Q 005406 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGVKLISYLQLQSQG 243 (698)
Q Consensus 164 ~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (698)
.++|+++.++.+++.+++++++++.+++......... .++. +..+... ....
T Consensus 303 ~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~--------------------~~~~ 354 (642)
T COG1020 303 AYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV----GLPG----LALDDAL--------------------SEIP 354 (642)
T ss_pred eEecCCCCChHHHHHHHHhhcCccEEEeccccccccc----cCCc----ccccccc--------------------ccCC
Confidence 9999999999999999999999999999833211000 0110 1111100 0000
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHHHHHHHHhCc
Q 005406 244 CSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERANQIVSVYYGV 323 (698)
Q Consensus 244 ~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~ 323 (698)
...+. .....+++.+|++|||||||.||||+++|+++.+.+.+....+.++..|+++...++.++.+....+.++..|+
T Consensus 355 ~~~~~-~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~ 433 (642)
T COG1020 355 DTDPI-PQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGALLEGA 433 (642)
T ss_pred ccCcc-cccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHHhCCC
Confidence 00000 12345689999999999999999999999999998888877799999999999999999999999999999999
Q ss_pred EEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHH
Q 005406 324 AVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDR 399 (698)
Q Consensus 324 ~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~ 399 (698)
++++.+ .++..+.+.+.++++|++..+|.++..+......... .
T Consensus 434 ~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~-------------------------~------- 481 (642)
T COG1020 434 RLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDL-------------------------I------- 481 (642)
T ss_pred EEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccc-------------------------c-------
Confidence 999987 5889999999999999999999999888763100000 0
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh--CCceecccCcchhcchhcccCCCCCC--CCCccCCCCCcEEE
Q 005406 400 LVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF--GCQVMEGYGMTETSCIISAIDKGDNL--SGHVGSPNPACEIK 475 (698)
Q Consensus 400 ~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~--g~~l~~~YG~TE~~~~~~~~~~~~~~--~~~vG~p~~~~~v~ 475 (698)
.....+|.+++||+.++..+...+.... ...+.+.||+||++............ ..++|+|++++.++
T Consensus 482 --------~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ 553 (642)
T COG1020 482 --------SPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLY 553 (642)
T ss_pred --------CCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEE
Confidence 0002489999999999999999877655 46899999999977665544433322 35899999999999
Q ss_pred EEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCcee
Q 005406 476 LVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEY 555 (698)
Q Consensus 476 i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~ 555 (698)
|+| +....++.+. .||+++.|.++.+||+++|+.|.+.|..+.+|+|||++++++||.+.++||.|+++|+ +|++
T Consensus 554 ild-~~~~~~p~gv---~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki-~g~R 628 (642)
T COG1020 554 ILD-QGLRPLPLGV---PGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKI-RGFR 628 (642)
T ss_pred EEC-CCCCcCCCCC---CeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEe-ceEe
Confidence 999 6666666665 7999999999999999999999999955469999999999999999999999999998 8999
Q ss_pred ecchHHHHHHhcCc
Q 005406 556 VAPEKIENVYAKCK 569 (698)
Q Consensus 556 v~p~eIE~~l~~~p 569 (698)
|++.|||..+.++|
T Consensus 629 iel~eie~~l~~~~ 642 (642)
T COG1020 629 IELGEIEAALAEQP 642 (642)
T ss_pred cCcHHHHHHHhcCC
Confidence 99999999998875
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=9.1e-40 Score=346.00 Aligned_cols=287 Identities=20% Similarity=0.181 Sum_probs=226.5
Q ss_pred CCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccC--CCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC-CC
Q 005406 256 EDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFY--PSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ-GD 331 (698)
Q Consensus 256 ~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~--~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~-~~ 331 (698)
+..++++|||||||.||||++||+++++.+......+++. +.|++++++|++|.+++.. .+.++..|+++++.+ ++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 4578999999999999999999999998887766666664 3468999999999999865 677888999998876 67
Q ss_pred hhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCC
Q 005406 332 NLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGG 411 (698)
Q Consensus 332 ~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~ 411 (698)
+..+++.++.. |+++++|++|..+.+.. ...+
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----------------------------------------------~~l~ 206 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----------------------------------------------YRLP 206 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----------------------------------------------cCCC
Confidence 77788777643 89999999998886520 0003
Q ss_pred cEEEEEecCCCCCHHHHHHHHHHhCC-ceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCC
Q 005406 412 RVRFMGSGASPLSPDVMDFLKVCFGC-QVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQP 490 (698)
Q Consensus 412 ~lr~i~~gG~~l~~~~~~~~~~~~g~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~ 490 (698)
+++. ++||+++++++.+.+++. +. .++++||+||+++++.... ++..|.|.|++++++ + ++
T Consensus 207 slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~-----~~~~~~~~p~~~~~~-~--~~-------- 268 (386)
T TIGR02372 207 GVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREA-----PDDPFRLLPDLACFA-D--TL-------- 268 (386)
T ss_pred ccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccC-----CCCCcccCCCccccC-C--Cc--------
Confidence 5665 678999999999999875 64 6999999999987554321 234677888776543 1 10
Q ss_pred CCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcC
Q 005406 491 HPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKF 570 (698)
Q Consensus 491 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~ 570 (698)
.+ .|+ ..|++|||+|+||++|+|+|+||+||+||+ +|++|+|.+||+++.+||.
T Consensus 269 ---~~---~g~-------------------~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~-~G~~V~p~eIE~~l~~~p~ 322 (386)
T TIGR02372 269 ---SS---AGL-------------------ARRLDLQDRLAWDKDGGFTILGRKDEILQV-GGVNVSPGHVRDILERNPR 322 (386)
T ss_pred ---cC---CCc-------------------cceeecCceEEEcCCCcEEEecccCCEEEE-CCEEEcHHHHHHHHHcCCC
Confidence 00 011 236899999999999999999999999997 8999999999999999999
Q ss_pred ceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecC
Q 005406 571 VLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPE 650 (698)
Q Consensus 571 V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~ 650 (698)
|.+|+|.. .++.+.|+|+++++. +. +.+.++|+++++ .+|+.|++|+.+.++++
T Consensus 323 V~~~~v~~--~g~~~~a~vv~~~~~--------------------~~---~~~~~~l~~~~~-~~L~~~~~P~~i~~~~~ 376 (386)
T TIGR02372 323 VRAAAVRL--DGRRLKAFIVVAEDA--------------------DE---AELEIELRATAA-RHLPAPARPDRFRFGTE 376 (386)
T ss_pred ceEEEEEc--CCceEEEEEEECCCC--------------------Ch---HHHHHHHHHHHH-HhCCCCCCCcEEEEccc
Confidence 99999974 357889999987532 00 123456777775 68999999999999999
Q ss_pred CCCCCCCccCcccCCC
Q 005406 651 PFSVENGLLTPTFKIK 666 (698)
Q Consensus 651 ~p~~~~~~~T~~GKi~ 666 (698)
+| +|++||++
T Consensus 377 lP------~t~~GKi~ 386 (386)
T TIGR02372 377 LP------RTGAGKLA 386 (386)
T ss_pred CC------CCCCCCcC
Confidence 99 99999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=6.2e-35 Score=317.02 Aligned_cols=329 Identities=17% Similarity=0.156 Sum_probs=233.8
Q ss_pred CCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhc---ccccccCCCcEEEEcCChhhHHH-HHHHHHHHHhCcEEEEe
Q 005406 253 PKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGF---SLMVQFYPSDIYMSYLPLAHIYE-RANQIVSVYYGVAVGFY 328 (698)
Q Consensus 253 ~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~~-~~~~~~~l~~G~~~~~~ 328 (698)
..++++++++|||||||.||+|.+||.++....... ...+++.++|++++..+..+..+ +...+.+...|++++..
T Consensus 72 ~~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 72 VPREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred CChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 356788999999999999999999999986653332 23367889999988776654333 33345577789888876
Q ss_pred C-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHH
Q 005406 329 Q-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRE 407 (698)
Q Consensus 329 ~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~ 407 (698)
+ .++..+++.|++++||+++++|+++..|++..... +..+
T Consensus 152 ~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~-------------------------~~~~-------------- 192 (422)
T TIGR02155 152 SGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRM-------------------------GIDP-------------- 192 (422)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHc-------------------------CCCc--------------
Confidence 5 67899999999999999999999999887643211 0000
Q ss_pred HcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCC--CCcEEEEEecCCCCCC
Q 005406 408 RLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPN--PACEIKLVDVPEMNYT 485 (698)
Q Consensus 408 ~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~--~~~~v~i~d~~~~~~~ 485 (698)
...++|.+++||+++++++.+.+.+.||+++++.||+||+++.......... ..|.++ +++.++|+|++++..+
T Consensus 193 -~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~~---~~g~~~~~~~~~~eivd~~~g~~v 268 (422)
T TIGR02155 193 -AQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVET---QDGLHIWEDHFYPEIIDPHTGEVL 268 (422)
T ss_pred -ccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeeccccc---CCCceEecCeeEEEEECCCCCCCC
Confidence 0037999999999999999999999999999999999998532111111111 123333 3577889996677766
Q ss_pred CCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecC-C-----cEEEEccCCCeEecCCceeecch
Q 005406 486 SEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG-G-----RLKIIDRKKNIFKLAQGEYVAPE 559 (698)
Q Consensus 486 ~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~-G-----~l~i~GR~~d~ikls~G~~v~p~ 559 (698)
+.++ .|||++++. +++.| ..+||+|||+|+++++ | .++|.||.||+||+ +|.+|+|.
T Consensus 269 ~~Ge---~Gelvvt~~------------~~~~~-p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~-~G~~v~p~ 331 (422)
T TIGR02155 269 PDGE---EGELVFTTL------------TKEAL-PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLII-RGVNVFPT 331 (422)
T ss_pred CCCC---eeEEEEecC------------Ccccc-ceeeEEcCcEEEEECCCCCcccccccccCccCCeEEE-CCEEECHH
Confidence 6555 899999973 33445 5789999999999876 4 47899999999997 79999999
Q ss_pred HHHHHHhcCcCce-eEEEEEcCC--CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCC
Q 005406 560 KIENVYAKCKFVL-QCFIYGDSF--NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQL 636 (698)
Q Consensus 560 eIE~~l~~~p~V~-~~~V~g~~~--~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L 636 (698)
+||+++.+||+|. ++.+..... .+.+++.|++.++... ....+-...+.++|.+.++ ..+
T Consensus 332 eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~----------------~~~~~~~~~~~~~i~~~~~-~~~ 394 (422)
T TIGR02155 332 QLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESYT----------------LRLHEQASLLAGEIQHTIK-QEV 394 (422)
T ss_pred HHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCccc----------------ccchHHHHHHHHHHHHHHH-hcc
Confidence 9999999999998 444433222 2467676666542200 0011112334555666664 455
Q ss_pred CCcceeeEEEEe--cCCCCCCCCccCcccCCChH
Q 005406 637 RGFEYAKAVTLM--PEPFSVENGLLTPTFKIKRP 668 (698)
Q Consensus 637 ~~~~~p~~i~~~--~~~p~~~~~~~T~~GKi~R~ 668 (698)
..+. .|.++ +++| +|+ ||++|.
T Consensus 395 ~~~~---~v~~~~~~~lp------~~~-GK~~~~ 418 (422)
T TIGR02155 395 GVSM---DVHLVEPGSLP------RSE-GKARRV 418 (422)
T ss_pred CcEE---EEEEECCCCcc------CCC-CCceEE
Confidence 5442 35554 5899 888 999874
No 124
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.98 E-value=4.3e-31 Score=296.85 Aligned_cols=503 Identities=16% Similarity=0.125 Sum_probs=327.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHA 157 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA 157 (698)
+.++.+.|.+.+..+|++.+..+.+.. ...+....+||++.....+.+++.|...|..+|+.|++++..+.++++..++
T Consensus 35 ~g~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~ 113 (1032)
T KOG1178|consen 35 MGTLEDSFRRELAEAPENTGHVIIPTA-SESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFA 113 (1032)
T ss_pred hcchhhHHHHHHhhcccCCCceEeecc-cccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeee
Confidence 457788899999999999999876542 2233355689999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCCCC----HHHHHHH---HhhccceEEEecccchHHHHhhh-hc-CCceeEEEEeCCCCCCCCCCCCC
Q 005406 158 CSAYSYISVPLYDTLG----PDAVKYV---VNHAEIEAIFCIPQTLNTLLSFI-SE-IPSVHLIVVVGGKDEHLPSLPST 228 (698)
Q Consensus 158 ~~~~G~~~vpl~~~~~----~~~l~~i---l~~~~~~~v~~~~~~~~~~~~~~-~~-~~~~~~ii~~~~~~~~~~~~~~~ 228 (698)
.+++|..+++++|.++ ++.+..+ +......+ .... .+.... .. .+... +
T Consensus 114 ~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i--~~~l---~i~~~~~~~~~~~~s-v---------------- 171 (1032)
T KOG1178|consen 114 VLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEI--VRRL---NIIDILLNSLFPKLS-V---------------- 171 (1032)
T ss_pred hhhcceEEEEecCCCcccccchHHHhhhhhheecccee--hhhh---hhHHHHhhccccccc-h----------------
Confidence 9999999999999999 3322111 11111111 0000 000000 00 00000 0
Q ss_pred CCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCCh-h
Q 005406 229 SGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPL-A 307 (698)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl-~ 307 (698)
... .-.|..+..... ........+|..+++.||||+||.||||.-+|..+.+...+....+..+.++++-....+ +
T Consensus 172 ~~~-~~~f~~~~~~~~--~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~ 248 (1032)
T KOG1178|consen 172 ETI-ADSFQMVLHNED--TREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYF 248 (1032)
T ss_pred hhc-cchhhhhhccCC--CcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeec
Confidence 000 011111111110 111223457889999999999999999999999999999998888888888876333333 2
Q ss_pred hHHHHHHHHHHHHhCcEEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHH
Q 005406 308 HIYERANQIVSVYYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSK 383 (698)
Q Consensus 308 h~~~~~~~~~~l~~G~~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k 383 (698)
|+.-.....+.++.|..+..+. ..+..+.+.+++++++....+|++.+.+........... ..+
T Consensus 249 ~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l--------~~~---- 316 (1032)
T KOG1178|consen 249 DDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLL--------EHA---- 316 (1032)
T ss_pred ccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhh--------hhh----
Confidence 2222223334455555444433 357899999999999999999999888876322110000 000
Q ss_pred HHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh-CCceecccCcchhcchhcccCCCCCCC
Q 005406 384 KQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF-GCQVMEGYGMTETSCIISAIDKGDNLS 462 (698)
Q Consensus 384 ~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~~~~ 462 (698)
...+...+ --+.|+....+|++....+...+...+ ..-...-|+.|+..+.........
T Consensus 317 ---~~~~dl~~--------------~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~--- 376 (1032)
T KOG1178|consen 317 ---FSLSDLLT--------------KRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSP--- 376 (1032)
T ss_pred ---hhcccccc--------------cchhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCc---
Confidence 00000000 004799999999999999887444433 222334488888776554432211
Q ss_pred CCccCCCCCcEEEEEecCCC---------CCCCCCC---CCC----ccEEEEeCCCccccccCChhhhcccc-----cCC
Q 005406 463 GHVGSPNPACEIKLVDVPEM---------NYTSEDQ---PHP----RGEICVRGPIVFQGYYKNEVQTREVI-----DGD 521 (698)
Q Consensus 463 ~~vG~p~~~~~v~i~d~~~~---------~~~~~~~---~~~----~GEl~v~g~~~~~GY~~~~~~t~~~f-----~~~ 521 (698)
.+.-+-...+.++...+. .+...+. ++. .|+-+..+..+..| +..++.....+ ..+
T Consensus 377 --s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~ 453 (1032)
T KOG1178|consen 377 --SKVLLTNENVYSVPKFDSIIGSLTVLESLYRAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKA 453 (1032)
T ss_pred --ccceecceeEEeccchhhccCCCcceeeeeccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchh
Confidence 111111222222211110 0000111 100 12222223344445 34444443333 245
Q ss_pred CceecCcEEEEecCCcEEEEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHH
Q 005406 522 GWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKD 598 (698)
Q Consensus 522 gw~~TGDlg~~~~~G~l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~ 598 (698)
..|+|||+|+..++|.+.|.||.|++||+ +|.+|...||+.++..||.|.++++....+ ++.++|||++....
T Consensus 454 r~y~tgD~gr~l~ng~l~~~GR~d~qIK~-rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~--- 529 (1032)
T KOG1178|consen 454 RIYRTGDNGRSLKNGGLEISGRADRQIKD-RGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGS--- 529 (1032)
T ss_pred hcccccccceeecCCCEEEEEeccceEEE-ccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCC---
Confidence 58999999999999999999999999998 899999999999999999999999887432 56899999988642
Q ss_pred HHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHH
Q 005406 599 WAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKER 673 (698)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~ 673 (698)
+ ......|+.+++ ..|+.|++|..++.++++| +|++||||+++|.+.
T Consensus 530 -------~--------------~~~~~~i~~~l~-~~La~y~vPs~~V~l~~vP------l~~~GKvDkkaL~~~ 576 (1032)
T KOG1178|consen 530 -------K--------------SVLIRDIRNYLK-KELASYMLPSLVVPLAKVP------LNPNGKVDKKALLEY 576 (1032)
T ss_pred -------C--------------chhHHHHHHhhc-ccccceecceEEEEhhhCC------cCCCCCcChhhhhhh
Confidence 1 011677888886 8999999999999999999 999999999999983
No 125
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=2.9e-28 Score=264.65 Aligned_cols=515 Identities=16% Similarity=0.155 Sum_probs=348.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCCHhHHHHHH
Q 005406 78 IGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH-GLQKGVRIGLYLINRPEWLIVDH 156 (698)
Q Consensus 78 ~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~e~~~~~l 156 (698)
..++.|+|+++++++||++|+... ++.......+||++|..+|.+++.+|+.. -+++||.|++++++++|++++++
T Consensus 769 l~~ile~Lq~R~a~tp~~~a~~~~---n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~ 845 (1363)
T KOG3628|consen 769 LLTILEILQWRAAKTPDHIAFTTL---NARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIY 845 (1363)
T ss_pred HHHHHHHHHHHhhcCCCceEEEEe---ccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHH
Confidence 378999999999999999999886 66666678899999999999999999976 57999999999999999999999
Q ss_pred HHHhcCCeEEecCCCCC------HHHHHHHHhhccceEEEecccchHHHHhh--hh--cCCceeEEEEeCCCCCCCCCCC
Q 005406 157 ACSAYSYISVPLYDTLG------PDAVKYVVNHAEIEAIFCIPQTLNTLLSF--IS--EIPSVHLIVVVGGKDEHLPSLP 226 (698)
Q Consensus 157 A~~~~G~~~vpl~~~~~------~~~l~~il~~~~~~~v~~~~~~~~~~~~~--~~--~~~~~~~ii~~~~~~~~~~~~~ 226 (698)
||+.+|.+++|+.|.-. -..+..|++..++..|+++......+.+. .. .......++..++....
T Consensus 846 ~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t----- 920 (1363)
T KOG3628|consen 846 ACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPET----- 920 (1363)
T ss_pred HHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchh-----
Confidence 99999999999987543 34788999999999999997654433321 11 01111222222221100
Q ss_pred CCCCceEeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCCh
Q 005406 227 STSGVKLISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPL 306 (698)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl 306 (698)
.......+.+. ..+.++...+++.+|++-+.--++|.--||.++|.++++.+........+.+..-++.+.+.
T Consensus 921 -----~~k~~~~~~k~--~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~ 993 (1363)
T KOG3628|consen 921 -----IRKRKKNIKKL--NTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSP 993 (1363)
T ss_pred -----hhhhhhhhhcc--CCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecC
Confidence 00011111111 11223334567899999999889999999999999999999999998888888888888888
Q ss_pred hhHHHHHH-HHHHHHhCcEEEEeC-----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Q 005406 307 AHIYERAN-QIVSVYYGVAVGFYQ-----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAY 380 (698)
Q Consensus 307 ~h~~~~~~-~~~~l~~G~~~~~~~-----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 380 (698)
+-..|+.. ++..+|.|....+++ .++..++..|+++++.-++.+-..++.+.+....+......
T Consensus 994 ~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~---------- 1063 (1363)
T KOG3628|consen 994 YSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSK---------- 1063 (1363)
T ss_pred ccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhh----------
Confidence 87777776 788999999988876 58999999999999998888888777776643322211100
Q ss_pred HHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHh---CC---ceecccCcchhcchhcc
Q 005406 381 NSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVCF---GC---QVMEGYGMTETSCIISA 454 (698)
Q Consensus 381 ~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~~---g~---~l~~~YG~TE~~~~~~~ 454 (698)
.+. + .+-..++..-+.....+..-+.+.+ |. .+--.|+.-=.-.++..
T Consensus 1064 --------~gn------n------------~s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r 1117 (1363)
T KOG3628|consen 1064 --------RGN------N------------TSSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLR 1117 (1363)
T ss_pred --------hhc------c------------cccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhc
Confidence 000 0 0001222222222233333222222 10 12222221111111110
Q ss_pred -----------c----------------CCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccc
Q 005406 455 -----------I----------------DKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGY 507 (698)
Q Consensus 455 -----------~----------------~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY 507 (698)
. .+.....-..|...+++++.|+++++..++.+++ .||||+.|..-+.+|
T Consensus 1118 ~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge---~GEIW~~S~hnA~~~ 1194 (1363)
T KOG3628|consen 1118 SYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGE---LGEIWVNSAHNASCS 1194 (1363)
T ss_pred cccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeCCccccccccCC---cceEEeccccccccc
Confidence 0 0000111224888899999999999888888876 999999999988888
Q ss_pred cCChh-hhcccc---------cCCCceecCcEEEEe------cC----CcEEEEccCCCeEecCCceeecchHHHHHH-h
Q 005406 508 YKNEV-QTREVI---------DGDGWLHTGDIGLWL------PG----GRLKIIDRKKNIFKLAQGEYVAPEKIENVY-A 566 (698)
Q Consensus 508 ~~~~~-~t~~~f---------~~~gw~~TGDlg~~~------~~----G~l~i~GR~~d~ikls~G~~v~p~eIE~~l-~ 566 (698)
++-.+ .....| ++.+|-||||+|++. .+ ..||++|-.++.+.+ +|.+.+|.+||..+ +
T Consensus 1195 ~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl-~GL~h~p~DIE~TV~~ 1273 (1363)
T KOG3628|consen 1195 FTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLEL-NGLRHFPSDIETTVER 1273 (1363)
T ss_pred cccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeee-cCcccCcchHHHHHHH
Confidence 76321 111222 355699999999984 22 359999999999999 89999999999999 7
Q ss_pred cCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceee-EE
Q 005406 567 KCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAK-AV 645 (698)
Q Consensus 567 ~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~-~i 645 (698)
.||.|..|+|+.. ...+|.++....+. ++.+.+---+. .-|..+.++- -+
T Consensus 1274 vH~~I~~cavF~~--~glvVvviE~~gq~----------------------~~~~LvPlIv~-----~vL~eH~iI~dvV 1324 (1363)
T KOG3628|consen 1274 VHPSIGGCAVFQA--TGLVVVVIECHGQQ----------------------ELADLVPLIVN-----VVLEEHYIILDVV 1324 (1363)
T ss_pred hcccccceeeEee--CCeEEEEEEecCch----------------------hHhhhhHHHHH-----HHHhhcceEEEEE
Confidence 7999999999974 45555555555421 11111111122 2233444444 45
Q ss_pred EEecC--CCCCCCCccCcccCCChHHHHHHH-HHHHHHHH
Q 005406 646 TLMPE--PFSVENGLLTPTFKIKRPQAKERF-AKAISNMY 682 (698)
Q Consensus 646 ~~~~~--~p~~~~~~~T~~GKi~R~~l~~~~-~~~i~~ly 682 (698)
.+++. +| +++.|--+|..+++.| ..+++.+|
T Consensus 1325 ~fV~~G~~p------~~~~gEK~R~~I~~~w~~~kL~~~~ 1358 (1363)
T KOG3628|consen 1325 AFVDKGVFP------RNSRGEKQRAHILDSWLAGKLDPIY 1358 (1363)
T ss_pred EEecCCccc------cCCchhhHHHHHHHHHHhcccceee
Confidence 56653 66 9999999999988875 44555544
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.95 E-value=2.7e-26 Score=249.44 Aligned_cols=259 Identities=17% Similarity=0.179 Sum_probs=187.1
Q ss_pred CCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEe
Q 005406 253 PKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFY 328 (698)
Q Consensus 253 ~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~ 328 (698)
...++++.++|||||||.||+|.+||.++.......... .++.++|+++...|+.+..+... .+.+...|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 356789999999999999999999999987665443332 47889999999999888766544 45567788876543
Q ss_pred CCChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHH
Q 005406 329 QGDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRER 408 (698)
Q Consensus 329 ~~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~ 408 (698)
+.....++.|+.+++|.++++|+.+..+.+..... +..+
T Consensus 163 -~~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~-------------------------g~~~--------------- 201 (445)
T TIGR03335 163 -GKCTFPIRIIESYRPTGIVASVFKLLRLARRMKAE-------------------------GIDP--------------- 201 (445)
T ss_pred -CchhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHc-------------------------CCCc---------------
Confidence 34456788999999999999999887776532211 0000
Q ss_pred cCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCC--CCcEEEEEecCCCCCCC
Q 005406 409 LGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPN--PACEIKLVDVPEMNYTS 486 (698)
Q Consensus 409 ~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~--~~~~v~i~d~~~~~~~~ 486 (698)
...++|.+++||++++++..+.+.+.+|+++++.||+||++.. ..+.. ..|..+ +.+.++|+|++++..++
T Consensus 202 ~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~~~-~~c~~------~~g~h~~~d~~~vEIvDp~~~~~vp 274 (445)
T TIGR03335 202 AESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGTMC-GECQA------VAGLHVPEDLVHLDVYDPRHQRFLP 274 (445)
T ss_pred ccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhhhe-EEecC------CCCccccCCceEEEEEcCCCCCCCc
Confidence 0047999999999999999999998899999999999998632 22211 123333 45789999966555566
Q ss_pred CCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEec-C----C----cEEEEccCCCeEecCCceeec
Q 005406 487 EDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP-G----G----RLKIIDRKKNIFKLAQGEYVA 557 (698)
Q Consensus 487 ~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~-~----G----~l~i~GR~~d~ikls~G~~v~ 557 (698)
+|+ .|||++++-.-.. +.+.+ +==-|+|||++++.. + | ++..+||.||++++ +|.+|+
T Consensus 275 ~Ge---~GELvvT~L~~~~--------~r~~~-PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~-~g~~~~ 341 (445)
T TIGR03335 275 DGE---CGRIVLTTLLKPG--------ERCGS-LLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWI-SGVPFN 341 (445)
T ss_pred CCC---ceEEEEEecCCCC--------ccCCc-eEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEE-CCEEeC
Confidence 555 8999998742100 00000 001289999999732 2 3 25557999999999 899999
Q ss_pred chHHHHHHhcC---cCce
Q 005406 558 PEKIENVYAKC---KFVL 572 (698)
Q Consensus 558 p~eIE~~l~~~---p~V~ 572 (698)
|.+||++|.++ +++.
T Consensus 342 p~~ie~~l~~~~~~~~~~ 359 (445)
T TIGR03335 342 RVDVERAVFQRENMDSLT 359 (445)
T ss_pred HHHHHHHHhccCCCCCCC
Confidence 99999999994 5554
No 127
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=4e-25 Score=216.88 Aligned_cols=222 Identities=13% Similarity=0.044 Sum_probs=164.7
Q ss_pred HHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCCHhHHHHHHHHHhcCC
Q 005406 85 FIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINRPEWLIVDHACSAYSY 163 (698)
Q Consensus 85 l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~ 163 (698)
+...++++|+++|+++. +...++.+.+||+|+.++++++|++|++ .|+++||+|+|+++|+++++++++||+++|+
T Consensus 2 ~~~~~~~~p~~~al~~~---~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~ 78 (227)
T TIGR03089 2 LSPLLAADPASPRLTFY---DDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGV 78 (227)
T ss_pred hhhhhhhCCCCcEEEEE---cCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 46678889999999753 2211123569999999999999999998 7999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCC-CCCCCCCCceEeeHHHHHhc
Q 005406 164 ISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHL-PSLPSTSGVKLISYLQLQSQ 242 (698)
Q Consensus 164 ~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 242 (698)
+++|++ ++++++++++.+....+. .+ +.++.+....... .......+ ..+|.+....
T Consensus 79 v~vp~n-------------~s~a~~~v~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 136 (227)
T TIGR03089 79 EVVLAG-------------DPDADVVVTGPDRLAAAA-----GS--GEVVALSLDPLGRRVAGELPPG--VIDFAPEVRV 136 (227)
T ss_pred EEEeCC-------------CCCCCEEEeCcchhhhcc-----cC--CceEEEeccccccCCCCCCCCc--ccchhhhhhc
Confidence 999995 789999999987765532 11 2233321100000 00000111 2456665543
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccccccCCCcEEEEcCChhhHHHHHH-HHHHHHh
Q 005406 243 GCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLMVQFYPSDIYMSYLPLAHIYERAN-QIVSVYY 321 (698)
Q Consensus 243 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~ 321 (698)
......+.....++|++.|+||||| +|++++... ...+++++|+++ .+|++|++|+.. ++.+++.
T Consensus 137 ~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~ 202 (227)
T TIGR03089 137 HGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAA 202 (227)
T ss_pred cCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhcc
Confidence 2221111213567999999999986 666665544 446789999999 999999999976 7789999
Q ss_pred CcEEEEeC-CChhhHHHHHhhhcCc
Q 005406 322 GVAVGFYQ-GDNLKLMDDLAVLKPT 345 (698)
Q Consensus 322 G~~~~~~~-~~~~~l~~~i~~~~~t 345 (698)
|+++++++ +++..+++.|+++|+|
T Consensus 203 G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 203 GGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred CceEEEecCCCHHHHHHHHHhhcCC
Confidence 99999888 8999999999999987
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.91 E-value=2.4e-22 Score=207.02 Aligned_cols=280 Identities=20% Similarity=0.201 Sum_probs=205.5
Q ss_pred CCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChh-hHHHHHHHHHHHHhCcEEEEe
Q 005406 253 PKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLA-HIYERANQIVSVYYGVAVGFY 328 (698)
Q Consensus 253 ~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~-h~~~~~~~~~~l~~G~~~~~~ 328 (698)
..-++...|--||||||.|+-+.+|+..+......+... .+...+|++..+.-.. +..|+.....+--.|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 445677779999999999999999998876554444333 5677788775544311 112223333444466666554
Q ss_pred C-CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHH
Q 005406 329 Q-GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRE 407 (698)
Q Consensus 329 ~-~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~ 407 (698)
. ++...-++.++.++||++.++|+.+..|++.+..... .+ +.
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~-------------------------~~----~~-------- 209 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGI-------------------------DP----DK-------- 209 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCC-------------------------Ch----hh--------
Confidence 4 5899999999999999999999999999886554310 00 00
Q ss_pred HcCCcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchh-cccCCCCCCCCCccCCCCCcEEEEEecCCCCCCC
Q 005406 408 RLGGRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCII-SAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTS 486 (698)
Q Consensus 408 ~~g~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~-~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~ 486 (698)
.++|.+++|+|+++++..+.+...+|+..++.||+||..+.. .-+.. .. -.-..-+..-+.|+|++++.+++
T Consensus 210 ---~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g~~eC~~--~~--glhi~eD~~~~Ei~dP~t~e~l~ 282 (438)
T COG1541 210 ---LSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPGAGECTE--RN--GLHIWEDHFIFEIVDPETGEQLP 282 (438)
T ss_pred ---cceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCccccccc--cc--CCCcchhhceeeeecCCcCccCC
Confidence 489999999999999999999999999999999999997663 21111 11 11223466888999999999998
Q ss_pred CCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecC----Cc-----EEEEccCCCeEecCCceeec
Q 005406 487 EDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG----GR-----LKIIDRKKNIFKLAQGEYVA 557 (698)
Q Consensus 487 ~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~----G~-----l~i~GR~~d~ikls~G~~v~ 557 (698)
+++ .|||.+..-. ++.+ +-=-|+|||++.+.++ |. -.|.||.||++++ .|.+|+
T Consensus 283 dge---~GelV~T~L~------------~~~~-PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~-~G~~vf 345 (438)
T COG1541 283 DGE---RGELVITTLT------------KEGM-PLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIV-RGVNVF 345 (438)
T ss_pred CCC---eeEEEEEecc------------ccCc-ceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEE-CCEEeC
Confidence 887 8999998622 1111 1113999999999764 32 6689999999999 699999
Q ss_pred chHHHHHHhcCcCce---eEEEEEcCCCCeEEEEEEcCh
Q 005406 558 PEKIENVYAKCKFVL---QCFIYGDSFNSCLVAIVAVDP 593 (698)
Q Consensus 558 p~eIE~~l~~~p~V~---~~~V~g~~~~~~~va~vv~~~ 593 (698)
|..||.++.+.+.+. ++++........+..-|+..+
T Consensus 346 p~~ie~~l~~~~~~~~~yqi~~~~~~~~d~L~V~vE~~~ 384 (438)
T COG1541 346 PSQIERVLLQIPEVTPHYQIILTRNGGLDELTVRVELEN 384 (438)
T ss_pred HHHHHHHHhcccCCCceEEEEEecCCCCceEEEEEEecC
Confidence 999999999999999 666766444566766666654
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=2e-19 Score=186.51 Aligned_cols=113 Identities=16% Similarity=0.072 Sum_probs=99.3
Q ss_pred CCCceecCcEEEE-ecCCcEEEEccCCCeEecCCc---eeecchHHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcC
Q 005406 520 GDGWLHTGDIGLW-LPGGRLKIIDRKKNIFKLAQG---EYVAPEKIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVD 592 (698)
Q Consensus 520 ~~gw~~TGDlg~~-~~~G~l~i~GR~~d~ikls~G---~~v~p~eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~ 592 (698)
.+|||+|||+|++ |++|+|+|.||.| +| ++|+|. ||++|.+||+|.+|+|+|.++ ++.++|+|++.
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~------~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~ 279 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG------TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAE 279 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc------CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEEC
Confidence 7899999999998 6999999999997 68 899999 999999999999999999654 57899999976
Q ss_pred hhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHH
Q 005406 593 PDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKE 672 (698)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~ 672 (698)
.. .+ .++|+++++ .+|+. ++|+.|.+++++| +|++||++|++|++
T Consensus 280 ~~----------~~-----------------~~el~~~l~-~~L~~-kvP~~v~~v~~lP------~t~~GKi~R~~Lr~ 324 (365)
T PRK09188 280 LP----------AD-----------------EKSLRARLA-GAKPP-KPPEHIQPVAALP------RDADGTVRDDILRL 324 (365)
T ss_pred CC----------CC-----------------HHHHHHHHH-hhchh-cCCcEEEEECCCC------CCCCCCccHHHHHH
Confidence 31 11 356777775 78999 9999999999999 99999999999998
Q ss_pred HH
Q 005406 673 RF 674 (698)
Q Consensus 673 ~~ 674 (698)
..
T Consensus 325 ~~ 326 (365)
T PRK09188 325 IA 326 (365)
T ss_pred Hh
Confidence 75
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.80 E-value=8.8e-18 Score=183.82 Aligned_cols=509 Identities=14% Similarity=0.140 Sum_probs=327.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHH-HHHhCCCCCCCEEEEEcCCC--HhHHH
Q 005406 77 EIGTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGS-GLLFHGLQKGVRIGLYLINR--PEWLI 153 (698)
Q Consensus 77 ~~~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~-~L~~~gv~~g~~V~i~~~n~--~e~~~ 153 (698)
....+..+++++-.+++..+|.++. |.+.. ...+||..+..+|.++|+ .|-+.|+.++++|.++..-+ .|+++
T Consensus 92 a~~d~~avl~~~~nhs~~~ta~i~i---d~kgk-~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~i 167 (1363)
T KOG3628|consen 92 ALTDIIAVLRYRRNHSATSTAHICI---DKKGK-ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLI 167 (1363)
T ss_pred hhcchHHHHHhhccCCCCCceEEEE---cCCCc-eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhh
Confidence 4556778888888899999999886 66544 788999999999999999 67778999999999999776 69999
Q ss_pred HHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEEeCCCCCCCCCCCCCCCc-e
Q 005406 154 VDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVVVGGKDEHLPSLPSTSGV-K 232 (698)
Q Consensus 154 ~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~-~ 232 (698)
..++|...|.+++|+.+..+.+++..+++....+++++................-.+.+ ..+. .... .
T Consensus 168 sl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v----------~~w~-t~~~k~ 236 (1363)
T KOG3628|consen 168 SLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAV----------AWWK-TNDFKG 236 (1363)
T ss_pred hhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHH----------Hhhh-cccccc
Confidence 99999999999999999999999999999999999998866544332211000000000 0000 0000 0
Q ss_pred EeeHHHHHhcCCCCCCCCCCCCCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc--------------------cc
Q 005406 233 LISYLQLQSQGCSSPQPFCPPKPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL--------------------MV 292 (698)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~--------------------~~ 292 (698)
.+.++.. ..+ ...-. ..+|-||++++|.--||+++|+ +..+.+.... .+
T Consensus 237 ~~~~~k~-------~~P--~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~ 305 (1363)
T KOG3628|consen 237 NYTKDKI-------KKP--RMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVF 305 (1363)
T ss_pred eeehhhc-------cCC--ceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhcc
Confidence 1111110 011 11112 8899999999999999999998 5433322211 13
Q ss_pred ccCCCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEeC----CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhh
Q 005406 293 QFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFYQ----GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKA 367 (698)
Q Consensus 293 ~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~~----~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 367 (698)
+....++++..+...-..|+++ .+.+++.|.+.+..+ ..+..+.+.+-.+|.+++..--..+......+.+.
T Consensus 306 ~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~--- 382 (1363)
T KOG3628|consen 306 PVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQED--- 382 (1363)
T ss_pred ccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCC---
Confidence 4456778888887777777776 778999999988877 46778888888999998876544433332221110
Q ss_pred cchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHH----hCCc-----
Q 005406 368 SGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMDFLKVC----FGCQ----- 438 (698)
Q Consensus 368 ~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~~~~~~----~g~~----- 438 (698)
|. ..+.|.+-+....+++|.+++.-..+..+..+....+ +|..
T Consensus 383 -------------------------p~---a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~ 434 (1363)
T KOG3628|consen 383 -------------------------PK---ATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVV 434 (1363)
T ss_pred -------------------------cc---cccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCccee
Confidence 00 0011222222233799999999999988876543332 2221
Q ss_pred -------------eecccCcchhcchhcccCCCC------------------------------CCCCCccCCCCC-cEE
Q 005406 439 -------------VMEGYGMTETSCIISAIDKGD------------------------------NLSGHVGSPNPA-CEI 474 (698)
Q Consensus 439 -------------l~~~YG~TE~~~~~~~~~~~~------------------------------~~~~~vG~p~~~-~~v 474 (698)
.+..=+++|.+...-..+... .....+|...|+ +.+
T Consensus 435 ~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~ 514 (1363)
T KOG3628|consen 435 DFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATL 514 (1363)
T ss_pred echhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEE
Confidence 122223355544322211100 012345666665 666
Q ss_pred EEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccc------------cCCCceecCcEEEEecCCcEEEEc
Q 005406 475 KLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVI------------DGDGWLHTGDIGLWLPGGRLKIID 542 (698)
Q Consensus 475 ~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f------------~~~gw~~TGDlg~~~~~G~l~i~G 542 (698)
.+++++....+..++ +|||||.++++..+||.-+..|...| ....|.|||=+|++. +|.++++|
T Consensus 515 ~vv~~~t~~LC~~~e---VGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~ 590 (1363)
T KOG3628|consen 515 AVVNPDTNQLCKTDE---VGEIWVSSNSLGKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLG 590 (1363)
T ss_pred EEeCCCcccccccCc---ceeEEEecCCcccceeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEE
Confidence 777766666665555 99999999999999998887777666 123489999999996 55666666
Q ss_pred cCCCeEecCCceeecch----------HHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhHHHHHHHHcCCCcccHHH
Q 005406 543 RKKNIFKLAQGEYVAPE----------KIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQ 612 (698)
Q Consensus 543 R~~d~ikls~G~~v~p~----------eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~ 612 (698)
-++|++.--.|.+.+.. -|+.+++..+.|-++.++- .+.++.+++-.+...+.
T Consensus 591 ~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~---~E~~~Vv~~esP~a~e~-------------- 653 (1363)
T KOG3628|consen 591 LKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE---DEHIVVVVLESPDATEE-------------- 653 (1363)
T ss_pred echhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee---cceEEEEEEeCcchhhh--------------
Confidence 55555533357666543 3556677788888888886 44555555555543210
Q ss_pred hhCCHHHHHHHHHHHHHHHHhCCCCCcceeeEEEEecCCCCCCCCccCcccCCChHHHHHHHHH
Q 005406 613 LCNDPRARAAVLAEMNAVGKEGQLRGFEYAKAVTLMPEPFSVENGLLTPTFKIKRPQAKERFAK 676 (698)
Q Consensus 613 ~~~~~~~~~~i~~~l~~~~~~~~L~~~~~p~~i~~~~~~p~~~~~~~T~~GKi~R~~l~~~~~~ 676 (698)
+.-+....+.+.+... +++..|-+ .++--+.+| +|+-|-|.-.++++.|.+
T Consensus 654 --~~~q~~~~v~q~l~~i---Hqv~vyCi--livP~~tLP------rt~~~Gi~~~~~k~~F~~ 704 (1363)
T KOG3628|consen 654 --NSFQWMSRVFQALDSI---HQVGVYCI--LIVPANTLP------RTPLGGIHNNECKQAFLE 704 (1363)
T ss_pred --hhhhHHHHHHHHHHHH---hcccceEE--EEeccccCC------CccccccccHHHHHHHHc
Confidence 1112223444444443 45555432 233335688 999888999888888853
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.72 E-value=4.9e-15 Score=157.54 Aligned_cols=258 Identities=19% Similarity=0.222 Sum_probs=160.4
Q ss_pred eEEEEecCCCCCCcceeeechHHHHHHHHhc---ccccccCCCcEEEEcCC-hhhHHHHHHHHHHHHh-CcEEEEeC--C
Q 005406 258 IATICYTSGTTGTPKGAVLTHGNLISNVAGF---SLMVQFYPSDIYMSYLP-LAHIYERANQIVSVYY-GVAVGFYQ--G 330 (698)
Q Consensus 258 ~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~p-l~h~~~~~~~~~~l~~-G~~~~~~~--~ 330 (698)
-..+..||||||.|-.+.++........... ....++..++++..++. -.+.+. .+.. ...+.+++ .
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~~ly~------~~~~~~~~~~~~~l~~ 174 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADNNLYQ------SVNNRWISLDFFDLLA 174 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccChhHHH------HHHhccceeeecCCCc
Confidence 3457789999999999999988653322211 11134455555544421 112221 1111 11133333 5
Q ss_pred ChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcC
Q 005406 331 DNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLG 410 (698)
Q Consensus 331 ~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g 410 (698)
+...+++.|++++|+++.+.|+.+..|++.+.+.-. .
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l-------------------------------------------~ 211 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL-------------------------------------------T 211 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC-------------------------------------------C
Confidence 788899999999999999999999999875432100 0
Q ss_pred CcEEEEEecCCCCCHHHHHHHHHHhCCceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCCCCCCCCC
Q 005406 411 GRVRFMGSGASPLSPDVMDFLKVCFGCQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMNYTSEDQP 490 (698)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~~~~ 490 (698)
-+++.++++||+++++..+.+++.||+++++.||+|| |.+++.+..+. -++-...--+|..++|++ +
T Consensus 212 ~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la~eC~~g~---lHl~ed~~~vE~~ivD~~-~-------- 278 (430)
T TIGR02304 212 IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLASTCRCGT---LHLNEDLVHIEKQYLDEH-K-------- 278 (430)
T ss_pred CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheEEecCCCC---EEEccccEEEEeeEECCC-C--------
Confidence 2689999999999999999999999999999999999 54433332111 111111112333366621 1
Q ss_pred CCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecC----Cc----E-EEEccCCCeEec--CCcee--ec
Q 005406 491 HPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG----GR----L-KIIDRKKNIFKL--AQGEY--VA 557 (698)
Q Consensus 491 ~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~----G~----l-~i~GR~~d~ikl--s~G~~--v~ 557 (698)
.++.+|.+ +.+. +... =-|+|||++.+.++ |. | .|.||.+|++++ .+|.. |+
T Consensus 279 --~~~~ViT~------L~n~---~~Pl----IRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~ 343 (430)
T TIGR02304 279 --RFVPIITD------FTRT---TQPI----VRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVF 343 (430)
T ss_pred --ceEEEEec------CCCc---cceE----EeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeC
Confidence 13334433 2221 0001 12899999988544 42 4 388999999985 35555 58
Q ss_pred chHHHHHH-hcCcCceeEEEEEcCCCCeEEEEEEcCh
Q 005406 558 PEKIENVY-AKCKFVLQCFIYGDSFNSCLVAIVAVDP 593 (698)
Q Consensus 558 p~eIE~~l-~~~p~V~~~~V~g~~~~~~~va~vv~~~ 593 (698)
|..++.++ ...++|.+.-++... ...+...+++.+
T Consensus 344 p~~~~~~i~~~~~~i~~yQi~Q~~-~~~l~v~~~~~~ 379 (430)
T TIGR02304 344 PDFIRRVILFTLPLIVEYRVLQTG-SAQLELIADCEL 379 (430)
T ss_pred HHHHHHHHHhcCCCCceEEEEEcc-CCeEEEEEEeCh
Confidence 99999885 567899998887754 344444444443
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.88 E-value=2.6e-09 Score=84.51 Aligned_cols=67 Identities=22% Similarity=0.159 Sum_probs=52.5
Q ss_pred HHHHHHhcCcCceeEEEEEcCC---CCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHHHHHhCCC
Q 005406 560 KIENVYAKCKFVLQCFIYGDSF---NSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNAVGKEGQL 636 (698)
Q Consensus 560 eIE~~l~~~p~V~~~~V~g~~~---~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~L 636 (698)
|||+++.+||+|.+|+|++.++ ++.++|+|++ . .++|+++++ .+|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~-~------------------------------~~~i~~~~~-~~l 48 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL-D------------------------------EEEIRDHLR-DKL 48 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE-H------------------------------HHHHHHHHH-HHS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe-e------------------------------ecccccchh-hhC
Confidence 7999999999999999999653 4789999998 2 255566665 569
Q ss_pred CCccee--eEEEEecC-CCCCCCCccCcccC
Q 005406 637 RGFEYA--KAVTLMPE-PFSVENGLLTPTFK 664 (698)
Q Consensus 637 ~~~~~p--~~i~~~~~-~p~~~~~~~T~~GK 664 (698)
++|++| ..++.+++ +| +|++||
T Consensus 49 ~~~~~P~~~~~v~~~~~lP------~t~~GK 73 (73)
T PF13193_consen 49 PPYMVPRRIRFVRLDEELP------RTPSGK 73 (73)
T ss_dssp -GGGS-SEEEEEEESSSEE------BETTSS
T ss_pred CCcceeeEEEEccccCcCC------CCCCCC
Confidence 999999 55555577 99 999998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.86 E-value=1.5e-07 Score=98.19 Aligned_cols=230 Identities=17% Similarity=0.232 Sum_probs=133.7
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc----cccCC-CcEEEEcCChhhH---HH-HH-HHHHHHHhCc
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM----VQFYP-SDIYMSYLPLAHI---YE-RA-NQIVSVYYGV 323 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~----~~~~~-~d~~l~~~pl~h~---~~-~~-~~~~~l~~G~ 323 (698)
.++++..++-||||||.|--+.+.+..+.......... .+... .-.++...|-... ++ .. ..+..+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 45667788899999999866666666555444332222 12221 2233443443221 11 11 1222334455
Q ss_pred EEEEeC--CChhhHHHHHh----hhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhh
Q 005406 324 AVGFYQ--GDNLKLMDDLA----VLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMW 397 (698)
Q Consensus 324 ~~~~~~--~~~~~l~~~i~----~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~ 397 (698)
...+-. .+...+++.+. ..+|..++++|.++..+...+.+.-.
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~------------------------------- 215 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGI------------------------------- 215 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCC-------------------------------
Confidence 533322 35666666553 56788999999877766654332210
Q ss_pred HHHHHHHHHHHcCCcEEEEEecC------CCCCH-HHHHHHHHHhCC----ceecccCcchhcchhcccCCCCCCCCCcc
Q 005406 398 DRLVFNKIRERLGGRVRFMGSGA------SPLSP-DVMDFLKVCFGC----QVMEGYGMTETSCIISAIDKGDNLSGHVG 466 (698)
Q Consensus 398 d~~~~~~~~~~~g~~lr~i~~gG------~~l~~-~~~~~~~~~~g~----~l~~~YG~TE~~~~~~~~~~~~~~~~~vG 466 (698)
+-.+....+.+-.|| +.+++ +..+.+.+.||+ .+++.|||||.....+-+.. ++.
T Consensus 216 --------~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~-----~~~- 281 (365)
T PF04443_consen 216 --------RFRLPKGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGH-----GHF- 281 (365)
T ss_pred --------cccCCCCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCC-----Ccc-
Confidence 001113455666666 56765 455678888898 69999999997654333211 111
Q ss_pred CCCCCcEEEEEecCCCCCCCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecC--------CcE
Q 005406 467 SPNPACEIKLVDVPEMNYTSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG--------GRL 538 (698)
Q Consensus 467 ~p~~~~~v~i~d~~~~~~~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~--------G~l 538 (698)
+.|.. +.|+|+.+..+++.|+ .|-|-+-.+... . .-+..-|.|+|.+..+ .++
T Consensus 282 -~~p~w-V~iRDp~tl~~~~~Ge---~Gli~vidl~~~-s-------------~p~~IlTeDlGvl~~~~~c~cr~g~~f 342 (365)
T PF04443_consen 282 -HVPPW-VIIRDPETLEPLPPGE---TGLIQVIDLANT-S-------------YPGFILTEDLGVLHGDDDCGCRKGKYF 342 (365)
T ss_pred -cCCCe-EEEECCCCCcCCCCCC---eeEEEEEccccc-C-------------CCcEEEEcceeeecCCCCCCCccCCEE
Confidence 22222 7788987777777765 888887765422 1 2344779999988654 279
Q ss_pred EEEccCCCe
Q 005406 539 KIIDRKKNI 547 (698)
Q Consensus 539 ~i~GR~~d~ 547 (698)
.++||.+.-
T Consensus 343 ~vlGR~~~a 351 (365)
T PF04443_consen 343 EVLGRADGA 351 (365)
T ss_pred EEEeCCCCC
Confidence 999998754
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.51 E-value=2.5e-06 Score=94.31 Aligned_cols=162 Identities=17% Similarity=0.219 Sum_probs=88.3
Q ss_pred CcEEEEEecCCCCCHHHHHHHHHHhC--CceecccCcchhcchhcccCCCCCCCCCccCCCCCcEEEEEecCCCC-----
Q 005406 411 GRVRFMGSGASPLSPDVMDFLKVCFG--CQVMEGYGMTETSCIISAIDKGDNLSGHVGSPNPACEIKLVDVPEMN----- 483 (698)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~g--~~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~----- 483 (698)
++|++|.+-+..-.....+.++..+| ..+..+|++||+...+-.. + ...+.+=.|-.+ -+..++.++..
T Consensus 267 P~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~i~i~~~-~--~~~~~~l~~~~~-ffEFip~~~~~~~~~~ 342 (528)
T PF03321_consen 267 PNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGFIGIPLD-P--EDPGYVLAPDSG-FFEFIPVDEDEQNPSE 342 (528)
T ss_dssp TT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEEEEEES--C--CC--EEE-TTSS-EEEEEE-STT------
T ss_pred CCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceEEEEecC-C--CCCceEeecCCe-EEEEEeccCCcccccC
Confidence 57885555444444456667777675 3356999999964322221 1 111111112222 45555544432
Q ss_pred ---C--CCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEec--CC--cEEEEccCCCeEecCCce
Q 005406 484 ---Y--TSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP--GG--RLKIIDRKKNIFKLAQGE 554 (698)
Q Consensus 484 ---~--~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~--~G--~l~i~GR~~d~ikls~G~ 554 (698)
. ..+.+.|..-||.|... .|.|. |+.||++++.. ++ .+.|+||.+.++.+ .||
T Consensus 343 ~~~~l~~~ele~G~~YelviTt~---~GLyR--------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l-~gE 404 (528)
T PF03321_consen 343 QPKTLLLHELEVGEEYELVITTN---SGLYR--------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSL-FGE 404 (528)
T ss_dssp -SSSEEGGG--TT-EEEEEEEST---TS-SS--------------EEECEEEEEEEEETTEEEEEEEEETTEEE-S-SS-
T ss_pred CCceecHHHhcCCCeEEEEEecc---cceee--------------eecCCEEEEeeccCCCcEEEEeccCCceeec-cee
Confidence 1 11223344667877753 23332 89999999852 35 69999999999998 799
Q ss_pred eecchHHHHHHhcC-----cCceeEEEEEcC---CCCeEEEEEEcChh
Q 005406 555 YVAPEKIENVYAKC-----KFVLQCFIYGDS---FNSCLVAIVAVDPD 594 (698)
Q Consensus 555 ~v~p~eIE~~l~~~-----p~V~~~~V~g~~---~~~~~va~vv~~~~ 594 (698)
+++-.+|++++.+. -.+.+..+..+. ....-+.++.+...
T Consensus 405 kl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 405 KLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp -EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred ecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 99999999999664 335566666652 34555666666553
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.37 E-value=0.0001 Score=81.90 Aligned_cols=132 Identities=14% Similarity=0.138 Sum_probs=80.1
Q ss_pred EEEEEecCCCCCHHHHHHHHHHhC-C-ceecccCcchhcchhcccCCCCCCCCCccCC--CCCcEEEEEecCCCCC----
Q 005406 413 VRFMGSGASPLSPDVMDFLKVCFG-C-QVMEGYGMTETSCIISAIDKGDNLSGHVGSP--NPACEIKLVDVPEMNY---- 484 (698)
Q Consensus 413 lr~i~~gG~~l~~~~~~~~~~~~g-~-~l~~~YG~TE~~~~~~~~~~~~~~~~~vG~p--~~~~~v~i~d~~~~~~---- 484 (698)
+..++.||.. .....++..+| . .+..+|++||+.+.+-..+ ...+..++.. +.+.-+..++.++.+.
T Consensus 307 i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~~--~~~p~~~~~~l~~~~~ffEFiP~~~~~~~~~~ 381 (597)
T PLN02249 307 LDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYFGINLNP--MCKPSEVSYTIMPNMAYFEFLPHNHDGDGALD 381 (597)
T ss_pred EEEEecCChH---HHHHHHHHHcCCCccccccccccceEEEeecCC--CCCCCCcceEecCCcEEEEeeecccCCcccCC
Confidence 7777778755 55566666553 3 4679999999654332211 1111112221 2245555554332110
Q ss_pred ------CCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEecC----CcEEEEccCCCeEecCCce
Q 005406 485 ------TSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLPG----GRLKIIDRKKNIFKLAQGE 554 (698)
Q Consensus 485 ------~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~~----G~l~i~GR~~d~ikls~G~ 554 (698)
+.+.+.|..-||+|... .|-|. |+.||++++..- =.|.|+||.+.++.+ .||
T Consensus 382 ~~~~v~l~eVe~G~~Y~lVvTT~---~GLyR--------------Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~-~GE 443 (597)
T PLN02249 382 ETSLVELADVEVGKEYELVITTY---AGLYR--------------YRVGDILRVTGFHNSAPQFKFIRRKNVLLSI-ESD 443 (597)
T ss_pred CCcEecHHHcCCCCeEEEEEEcc---cceeE--------------eecCCEEEEeeccCCCcEEEEEccCCcceec-ccc
Confidence 11122333566777642 23221 899999998532 269999999999998 899
Q ss_pred eecchHHHHHHhc
Q 005406 555 YVAPEKIENVYAK 567 (698)
Q Consensus 555 ~v~p~eIE~~l~~ 567 (698)
++.-++++.++.+
T Consensus 444 Kl~e~~v~~Av~~ 456 (597)
T PLN02249 444 KTDEADLQKAVEN 456 (597)
T ss_pred cCCHHHHHHHHHH
Confidence 9999999998866
No 136
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.88 E-value=0.001 Score=73.41 Aligned_cols=139 Identities=14% Similarity=0.171 Sum_probs=80.6
Q ss_pred CcEEEEEecCCCCCHHHHHHHHHHh-CCce-ecccCcchhcchhcccCCCCCCCCCccCCCCC-cEEEEEecCCCCC---
Q 005406 411 GRVRFMGSGASPLSPDVMDFLKVCF-GCQV-MEGYGMTETSCIISAIDKGDNLSGHVGSPNPA-CEIKLVDVPEMNY--- 484 (698)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~-g~~l-~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~-~~v~i~d~~~~~~--- 484 (698)
+++++|.+--..-.......++..+ |.++ --+||+||+.+.+-..+..+.. ......+|+ .-+..++.++++.
T Consensus 293 P~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~p~-~~sy~L~p~~~yFEFip~~~~~~~~~ 371 (606)
T PLN02247 293 PRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPLSDPS-DVSYTLLPNMAYFEFLPVDKNNGEVI 371 (606)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcCCCcc-CCceeecCCcEEEEEeecCCCccccc
Confidence 5777766544334555666666555 5554 4699999975543332211111 112222333 2334443332210
Q ss_pred -----------------------CCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEe----cCCc
Q 005406 485 -----------------------TSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWL----PGGR 537 (698)
Q Consensus 485 -----------------------~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~----~~G~ 537 (698)
+.+.+.|..-||+|.. +.|.| -||.||+.++. ..=.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt---~~GLY--------------RYrlGDvv~V~GF~n~~P~ 434 (606)
T PLN02247 372 HFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTT---FTGLY--------------RYRVGDILMVTGFYNNAPQ 434 (606)
T ss_pred ccccccccccccccccccCceecHHHccCCCeEEEEEEe---cCceE--------------EEecCCEEEEeeecCCCce
Confidence 0012223355676654 22322 28999998874 2246
Q ss_pred EEEEccCCCeEecCCceeecchHHHHHHhcC
Q 005406 538 LKIIDRKKNIFKLAQGEYVAPEKIENVYAKC 568 (698)
Q Consensus 538 l~i~GR~~d~ikls~G~~v~p~eIE~~l~~~ 568 (698)
+.|++|.+.+..+ .|++..-.++-+++.+.
T Consensus 435 ~~Fv~R~~~vlsi-~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 435 FRFVQRRNVVLSI-DTDKTNEEDLLKAVTQA 464 (606)
T ss_pred EEEEecCCceeec-ccccCCHHHHHHHHHHH
Confidence 9999999999998 89999999998888553
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.59 E-value=0.0041 Score=68.63 Aligned_cols=138 Identities=14% Similarity=0.158 Sum_probs=79.8
Q ss_pred CcEEEEEecCCCCCHHHHHHHHHHh-CCc-eecccCcchhcchhcccCCCCCCCCCcc-CCCCC-cEEEEEecCCCC--C
Q 005406 411 GRVRFMGSGASPLSPDVMDFLKVCF-GCQ-VMEGYGMTETSCIISAIDKGDNLSGHVG-SPNPA-CEIKLVDVPEMN--Y 484 (698)
Q Consensus 411 ~~lr~i~~gG~~l~~~~~~~~~~~~-g~~-l~~~YG~TE~~~~~~~~~~~~~~~~~vG-~p~~~-~~v~i~d~~~~~--~ 484 (698)
+++++|.+-...-.......++..+ |.+ +--+|++||+.+.+-..+. ..+..+. ..+|+ .-+..++.++.+ .
T Consensus 304 P~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~--~~p~~~sy~L~p~~~yFEFip~~~~~~~~ 381 (612)
T PLN02620 304 PNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPL--CKPSEVSYTLIPTMAYFEFLPVHRNNGVT 381 (612)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCC--CCcccceeeecCCcEEEEEeeccCccccc
Confidence 5777666544444455556666544 555 5589999997544332221 1112222 22333 223334322110 0
Q ss_pred -------------------CCCCCCCCccEEEEeCCCccccccCChhhhcccccCCCceecCcEEEEec----CCcEEEE
Q 005406 485 -------------------TSEDQPHPRGEICVRGPIVFQGYYKNEVQTREVIDGDGWLHTGDIGLWLP----GGRLKII 541 (698)
Q Consensus 485 -------------------~~~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~~gw~~TGDlg~~~~----~G~l~i~ 541 (698)
+.+.+.|..-||+|.. +.|.| -|+.||+.++.. .=.+.|+
T Consensus 382 ~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt---~~GLy--------------RYrlGDvv~V~Gf~n~~P~~~Fv 444 (612)
T PLN02620 382 NSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTT---YAGLY--------------RYRVGDVLRVAGFKNKAPQFSFI 444 (612)
T ss_pred ccccccccccccccCccccHHHccCCCeEEEEEEe---cCceE--------------EEecCCEEEEeeecCCCceEEEE
Confidence 1112233456777764 22322 189999988842 2469999
Q ss_pred ccCCCeEecCCceeecchHHHHHHhcC
Q 005406 542 DRKKNIFKLAQGEYVAPEKIENVYAKC 568 (698)
Q Consensus 542 GR~~d~ikls~G~~v~p~eIE~~l~~~ 568 (698)
+|.+-+..+ .|++.+-.++-.++.+.
T Consensus 445 ~R~~~~lsi-~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 445 CRKNVVLSI-DSDKTDEVELQNAVKNA 470 (612)
T ss_pred eecCceeec-ccccCCHHHHHHHHHHH
Confidence 999999998 89999999998887543
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=96.45 E-value=0.014 Score=48.61 Aligned_cols=86 Identities=21% Similarity=0.162 Sum_probs=49.2
Q ss_pred ceeecchHHHHHHhcCcCce-eEEEE--EcCCCCeEEEEEEcChhHHHHHHHHcCCCcccHHHhhCCHHHHHHHHHHHHH
Q 005406 553 GEYVAPEKIENVYAKCKFVL-QCFIY--GDSFNSCLVAIVAVDPDVLKDWAASQGIKFEDLEQLCNDPRARAAVLAEMNA 629 (698)
Q Consensus 553 G~~v~p~eIE~~l~~~p~V~-~~~V~--g~~~~~~~va~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 629 (698)
|.||+|..||+++.++|++. +..++ -....+.+...|...++.. .+....+++.+.+.+.|++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~--------------~~~~~~~~l~~~i~~~lk~ 66 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFS--------------DDAEDLEALAERIAERLKE 66 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCC--------------TTHHHHHHHHHHHHHHHHH
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccC--------------cchHHHHHHHHHHHHHHHh
Confidence 78999999999999999999 33332 2334566667777776320 0011124455666666666
Q ss_pred HHHhCCCCCcceeeEEEEec--CCCCCCCCccCcccCCCh
Q 005406 630 VGKEGQLRGFEYAKAVTLMP--EPFSVENGLLTPTFKIKR 667 (698)
Q Consensus 630 ~~~~~~L~~~~~p~~i~~~~--~~p~~~~~~~T~~GKi~R 667 (698)
.+ ++. | .|.+++ .+| +| .||.+|
T Consensus 67 ~l---gv~----~-~V~lv~~gtLp------r~-~~K~~R 91 (96)
T PF14535_consen 67 RL---GVR----P-EVELVPPGTLP------RS-EGKAKR 91 (96)
T ss_dssp HH---SS-----E-EEEEE-TT-S----------SSSS-S
T ss_pred hc---Cce----E-EEEEECCCCcc------CC-CCcceE
Confidence 54 232 2 566665 588 76 689877
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=93.71 E-value=0.38 Score=51.14 Aligned_cols=93 Identities=12% Similarity=0.010 Sum_probs=75.9
Q ss_pred ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceE
Q 005406 111 YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEA 188 (698)
Q Consensus 111 ~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~ 188 (698)
..-+|+.|+...+..+|+.|...|..+||+|.+...-+. .-+...+|+.++|++++|+.+ -..++...++++.++.+
T Consensus 107 ~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~-g~~~~~~~l~~df~~tv 185 (438)
T COG1541 107 VFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISG-GNTERQLELMKDFKPTV 185 (438)
T ss_pred eeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCC-ccHHHHHHHHHhcCCcE
Confidence 345899999999999999999999999998877766221 116788999999999999988 34567788999999999
Q ss_pred EEecccchHHHHhhhh
Q 005406 189 IFCIPQTLNTLLSFIS 204 (698)
Q Consensus 189 v~~~~~~~~~~~~~~~ 204 (698)
|.+.++..-.+.+...
T Consensus 186 I~~tps~~l~lae~~~ 201 (438)
T COG1541 186 IAATPSYLLYLAEEAE 201 (438)
T ss_pred EEEChHHHHHHHHHHH
Confidence 9999987766655443
No 140
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=86.17 E-value=7.6 Score=42.11 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=70.2
Q ss_pred CCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEecCCCCCHHHHHHH
Q 005406 105 DGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVPLYDTLGPDAVKYV 180 (698)
Q Consensus 105 ~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~i 180 (698)
.|.+|.. -.+|..++...+..++..+...|+++||++......+. ......+++...|+.++++.... .+.+...
T Consensus 84 SGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~ 162 (422)
T TIGR02155 84 SGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQL 162 (422)
T ss_pred CCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHH
Confidence 5555543 34577777766677777888889999998877655442 22234677889999999987754 5778899
Q ss_pred HhhccceEEEecccchHHHHh
Q 005406 181 VNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 181 l~~~~~~~v~~~~~~~~~~~~ 201 (698)
|++.++.++++.+.....+..
T Consensus 163 i~~~~~t~l~~~Ps~l~~L~~ 183 (422)
T TIGR02155 163 IQDFKPDIIMVTPSYMLNLLE 183 (422)
T ss_pred HHHHCCCEEEEcHHHHHHHHH
Confidence 999999999998877665543
No 141
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=84.99 E-value=9.8 Score=41.62 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=67.6
Q ss_pred CCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh--HHHHHHHHHhcCCeEEecCCCCCHHHHHHH
Q 005406 105 DGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE--WLIVDHACSAYSYISVPLYDTLGPDAVKYV 180 (698)
Q Consensus 105 ~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~i 180 (698)
.|.++. ...+|..++...+...+..+...|+.+||++.+..+.+.. .....+|+...|+.++|... .+....+
T Consensus 95 SGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~ 171 (445)
T TIGR03335 95 SGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRI 171 (445)
T ss_pred CCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHH
Confidence 444443 3457889998888888888888999999999888766542 23456788999999887653 2345678
Q ss_pred HhhccceEEEecccchHHH
Q 005406 181 VNHAEIEAIFCIPQTLNTL 199 (698)
Q Consensus 181 l~~~~~~~v~~~~~~~~~~ 199 (698)
+++.++.++++.......+
T Consensus 172 i~~~~~t~l~~~ps~ll~L 190 (445)
T TIGR03335 172 IESYRPTGIVASVFKLLRL 190 (445)
T ss_pred HHHhCCCEEEECHHHHHHH
Confidence 8999999998876554433
No 142
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.41 E-value=41 Score=37.25 Aligned_cols=104 Identities=20% Similarity=0.138 Sum_probs=72.5
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (698)
.++.++++.. ..|.++. ...+|+..+...+..+.. ..++++++++...++-.. .+...+++++..|+.+++
T Consensus 164 ~~~~~a~i~~--TSGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 238 (513)
T PRK07656 164 DPDDVADILF--TSGTTGRPKGAMLTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILP 238 (513)
T ss_pred CCCceEEEEe--CCCCCCCCCEEEEecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEe
Confidence 3355565443 2454443 346788888766655443 347889999887776543 345567899999998877
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
. +...++.+...+++.++.+++..+.....+..
T Consensus 239 ~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 271 (513)
T PRK07656 239 L-PVFDPDEVFRLIETERITVLPGPPTMYNSLLQ 271 (513)
T ss_pred c-CcCCHHHHHHHHHHhCCeEEechHHHHHHHHc
Confidence 5 56788999999999999999988876665544
No 143
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=70.29 E-value=64 Score=35.68 Aligned_cols=102 Identities=10% Similarity=0.007 Sum_probs=71.4
Q ss_pred CCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhH-HHHHHHHHhcCCeEEecCC
Q 005406 94 DYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEW-LIVDHACSAYSYISVPLYD 170 (698)
Q Consensus 94 d~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~ 170 (698)
+.++++.. ..|..+. .-.+|++.+...+..... ..++++++++....+-...+ +...++++..|+.++..+.
T Consensus 167 ~~~~~i~~--TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 167 NDAAAMLY--TSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred cceEEEEE--CCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 44555443 2454443 346788888766655554 45788999988887754322 3344558888998887766
Q ss_pred CCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 171 TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 171 ~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
. +++.+...+++.++.++++.+.....+..
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~ 271 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIWQMLLK 271 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHHHHHHc
Confidence 4 88999999999999999998877666554
No 144
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=67.88 E-value=64 Score=34.78 Aligned_cols=114 Identities=15% Similarity=0.003 Sum_probs=76.1
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH-hHHHHHHHHHhcCCeEEecC
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP-EWLIVDHACSAYSYISVPLY 169 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~-e~~~~~lA~~~~G~~~vpl~ 169 (698)
+++++++.. ..|.++. ...+|++.+...+..++.. .+++++|++....+-.. ..+..+++++..|+..+..+
T Consensus 110 ~~~~~~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 184 (436)
T TIGR01923 110 MDQIATLMF--TSGTTGKPKAVPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVD 184 (436)
T ss_pred cCceEEEEe--CCCCCCCCcEEEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecc
Confidence 345555433 2555453 3467999988777666654 47899998877776532 22335678889999888775
Q ss_pred CCCCHHHHHHHHhhccceEEEecccchHHHHhhhhcCCceeEEEE
Q 005406 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISEIPSVHLIVV 214 (698)
Q Consensus 170 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 214 (698)
+. +.+...+++.++.++...+.....+.......+.++.++.
T Consensus 185 ~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~l~~~~~ 226 (436)
T TIGR01923 185 KF---NQLLEMIANERVTHISLVPTQLNRLLDEGGHNENLRKILL 226 (436)
T ss_pred hH---HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCCCceEEEEE
Confidence 43 4888899999999999988776655544333345665554
No 145
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=66.50 E-value=68 Score=34.32 Aligned_cols=120 Identities=19% Similarity=0.137 Sum_probs=83.5
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCC--HhHHHHHHHHHhcCCeEE
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLF-HGLQKGVRIGLYLINR--PEWLIVDHACSAYSYISV 166 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~--~e~~~~~lA~~~~G~~~v 166 (698)
.|+.++++.- ..|.+|. ...+|++.+...+..+. +.. .+++ |++..+++-+ ..++..+++++..|+..+
T Consensus 153 ~~~~~~~i~~--TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~ 226 (417)
T PF00501_consen 153 SPDDPAFILF--TSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLV 226 (417)
T ss_dssp TTTSEEEEEE--ESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEE
T ss_pred CccceeEeec--cccccccccccccccccccccccccc--cccccccC--ceEEeecccccccccccccccccccccccc
Confidence 5688888765 3455444 45789999988888877 433 2333 6666665554 344478899999999999
Q ss_pred ecCCCCC--HHHHHHHHhhccceEEEecccchHHHHhhh--------hcCCceeEEEEeCC
Q 005406 167 PLYDTLG--PDAVKYVVNHAEIEAIFCIPQTLNTLLSFI--------SEIPSVHLIVVVGG 217 (698)
Q Consensus 167 pl~~~~~--~~~l~~il~~~~~~~v~~~~~~~~~~~~~~--------~~~~~~~~ii~~~~ 217 (698)
..+.... ++.+...+++.++.++++.+.....+.+.. ..++.++.+++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~ 287 (417)
T PF00501_consen 227 LPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGE 287 (417)
T ss_dssp EESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESS
T ss_pred ccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8876654 577889999999999999988877776522 14566787776544
No 146
>PRK12583 acyl-CoA synthetase; Provisional
Probab=66.02 E-value=1e+02 Score=34.58 Aligned_cols=103 Identities=14% Similarity=0.073 Sum_probs=70.6
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CHhHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLIN--RPEWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~e~~~~~lA~~~~G~~~vp 167 (698)
.++.+|++.- ..|.++. ...+|+..+...+..+... .+++++|++....+- ...++...++++..|+.++.
T Consensus 199 ~~~~~a~i~~--TSGsTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~ 273 (558)
T PRK12583 199 DRDDPINIQY--TSGTTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVY 273 (558)
T ss_pred CCCCcEEEEE--CCCCCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEe
Confidence 3455555433 2454443 3467888886655554443 478889988776653 34566777888889998875
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHH
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTL 199 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~ 199 (698)
......+..+...+++.++.+++..+.....+
T Consensus 274 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l 305 (558)
T PRK12583 274 PNEAFDPLATLQAVEEERCTALYGVPTMFIAE 305 (558)
T ss_pred ecCCCCHHHHHHHHHHcCCeEEeccHHHHHHH
Confidence 45567788888999999999998877655433
No 147
>PRK08315 AMP-binding domain protein; Validated
Probab=64.59 E-value=97 Score=34.78 Aligned_cols=103 Identities=18% Similarity=0.107 Sum_probs=71.0
Q ss_pred CCCCceEEEeecCCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CHhHHHHHHHHHhcCCeEEec
Q 005406 93 PDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLIN--RPEWLIVDHACSAYSYISVPL 168 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~e~~~~~lA~~~~G~~~vpl 168 (698)
++.++++.. ..|.++.. ..+|+..+...+..+.. ..++++++++....+- ...++..+++++..|+.++..
T Consensus 198 ~~~~a~i~~--TSGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 272 (559)
T PRK08315 198 PDDPINIQY--TSGTTGFPKGATLTHRNILNNGYFIGE---AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYP 272 (559)
T ss_pred CCCcEEEEE--cCCCCCCcceEEeeHHHHHHHHHHHHH---hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEe
Confidence 455555443 25555543 45788877655554443 3478999988777665 345556678889999988866
Q ss_pred CCCCCHHHHHHHHhhccceEEEecccchHHHH
Q 005406 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLL 200 (698)
Q Consensus 169 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 200 (698)
.....+..+...+++.++.+++..+.....+.
T Consensus 273 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~ 304 (559)
T PRK08315 273 GEGFDPLATLAAVEEERCTALYGVPTMFIAEL 304 (559)
T ss_pred cCCCCHHHHHHHHHHcCCeEEecchHHHHHHH
Confidence 66678888999999999999988776554433
No 148
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=59.42 E-value=1.7e+02 Score=32.73 Aligned_cols=118 Identities=15% Similarity=0.081 Sum_probs=77.2
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--HhHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINR--PEWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~--~e~~~~~lA~~~~G~~~vp 167 (698)
.|+.+|++.- ..|.++. ...+|++.+...+.... ...++.++|++..++|-. ..+....+..+..|+.++.
T Consensus 181 ~~~d~a~i~~--TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~ 255 (539)
T PRK06334 181 DPEDVAVILF--TSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVF 255 (539)
T ss_pred CcCCEEEEEE--CCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEE
Confidence 4566776553 3555443 34678888765544333 345678889887777643 2333345677788888776
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHhhh----hcCCceeEEEE
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI----SEIPSVHLIVV 214 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~----~~~~~~~~ii~ 214 (698)
......++.+...+++.++.+++..+.....+.... ..++.++.++.
T Consensus 256 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~ 306 (539)
T PRK06334 256 AYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVI 306 (539)
T ss_pred ecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEE
Confidence 655677889999999999999999887766554422 12455665554
No 149
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=58.90 E-value=1.9e+02 Score=30.54 Aligned_cols=119 Identities=13% Similarity=0.055 Sum_probs=81.5
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEecC
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPLY 169 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~ 169 (698)
++.++++.. ..|..+. ...+|++.+...+..+.. ..++++++++....+-... .+..+++++..|+..+...
T Consensus 119 ~~~~~~i~~--TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~ 193 (408)
T TIGR01733 119 PDDLAYVIY--TSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPP 193 (408)
T ss_pred CCCcEEEEE--cCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcC
Confidence 566666543 2444343 455788888766666655 4467788888887766543 4556788888898888776
Q ss_pred CCCC--HHHHHHHHhhccceEEEecccchHHHHhhh-hcCCceeEEEEeC
Q 005406 170 DTLG--PDAVKYVVNHAEIEAIFCIPQTLNTLLSFI-SEIPSVHLIVVVG 216 (698)
Q Consensus 170 ~~~~--~~~l~~il~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~ii~~~ 216 (698)
.... ++.+..++++.++..+++.+.....+.+.. ...+.++.++.-+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g 243 (408)
T TIGR01733 194 EDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVILGG 243 (408)
T ss_pred hhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEEEeC
Confidence 6554 788999999999999999988777665543 2345666665543
No 150
>PLN03051 acyl-activating enzyme; Provisional
Probab=57.90 E-value=94 Score=34.42 Aligned_cols=104 Identities=9% Similarity=-0.185 Sum_probs=67.5
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEecC
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPLY 169 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~ 169 (698)
|+.+|++.- ..|.++. ...+|+..+...+... ....++.++|++...++-... .+..+++++..|++++...
T Consensus 118 ~~d~a~i~y--TSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 118 VESVTNILF--SSGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred ccceEEEEe--CCCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 355665543 2455443 2356777665433322 234578888987666554321 1235678889999988776
Q ss_pred CCCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 170 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
....++.+...+++.++.++...+.....+..
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 55567889999999999999988877665543
No 151
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=54.38 E-value=1.5e+02 Score=33.55 Aligned_cols=104 Identities=9% Similarity=-0.055 Sum_probs=70.0
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh--HHHHHHHHHhcCCeEEec
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE--WLIVDHACSAYSYISVPL 168 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl 168 (698)
++.++++.- ..|.++. ...+|++.+...+.. .....+++++|++....+-... ....+++.+..|+..+..
T Consensus 204 ~~~~a~i~~--TSGTTG~PKgV~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~ 278 (570)
T PRK04319 204 REDGAILHY--TSGSTGKPKGVLHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVID 278 (570)
T ss_pred CCCCEEEEe--CCCCCCCCCEEEEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEE
Confidence 455665543 2555443 235688777544333 3334578888876555443321 234577888999988887
Q ss_pred CCCCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 169 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
.....++.+...+++.++.+++..+.....+..
T Consensus 279 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 311 (570)
T PRK04319 279 GGRFSPERWYRILEDYKVTVWYTAPTAIRMLMG 311 (570)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 777889999999999999999998877766654
No 152
>PRK07788 acyl-CoA synthetase; Validated
Probab=52.47 E-value=1.5e+02 Score=33.26 Aligned_cols=117 Identities=17% Similarity=0.048 Sum_probs=72.3
Q ss_pred CCCceEEEeecCCccCCce--EEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhH-HHHHHHHHhcCCeEEecCC
Q 005406 94 DYKYLGTRVRVDGTVGGYK--WMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEW-LIVDHACSAYSYISVPLYD 170 (698)
Q Consensus 94 d~~al~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~~ 170 (698)
+..+++.. ..|.+|..+ .+|...+...+ +......++.+++++....+-.-.+ +..+++++..|+.++.. .
T Consensus 207 ~~~~~i~~--TSGTTG~PKgv~~s~~~~~~~~---~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~ 280 (549)
T PRK07788 207 KPGGIVIL--TSGTTGTPKGAPRPEPSPLAPL---AGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-R 280 (549)
T ss_pred CCCcEEEE--CCCCCCCCCEEeccCccHHHHH---HHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-C
Confidence 44454432 255555433 45555554433 3334456788888887766543322 22355677788887765 5
Q ss_pred CCCHHHHHHHHhhccceEEEecccchHHHHhhhh------cCCceeEEEEeC
Q 005406 171 TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS------EIPSVHLIVVVG 216 (698)
Q Consensus 171 ~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~~ii~~~ 216 (698)
...++.+...+++.++.+++..+.....+.+... .++.++.++.-+
T Consensus 281 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG 332 (549)
T PRK07788 281 RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSG 332 (549)
T ss_pred CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeC
Confidence 6778899999999999999998887766554322 245566555543
No 153
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=52.27 E-value=1e+02 Score=23.39 Aligned_cols=46 Identities=17% Similarity=0.280 Sum_probs=31.9
Q ss_pred EecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChhH
Q 005406 548 FKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPDV 595 (698)
Q Consensus 548 ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~~ 595 (698)
|++..|. -...++.+.+.++|.|.+|..+... .+.++-+.+++.+.
T Consensus 3 V~~~~~~-~~~~~~~~~l~~~p~V~~~~~vtG~-~d~~~~v~~~d~~~ 48 (74)
T PF01037_consen 3 VKVEPGH-DAYDEFAEALAEIPEVVECYSVTGE-YDLILKVRARDMEE 48 (74)
T ss_dssp EEESTTG-THHHHHHHHHHTSTTEEEEEEESSS-SSEEEEEEESSHHH
T ss_pred EEEcCCC-chHHHHHHHHHcCCCEEEEEEEeCC-CCEEEEEEECCHHH
Confidence 4444444 4567899999999999999887532 45666666666543
No 154
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=51.74 E-value=2.2e+02 Score=32.11 Aligned_cols=104 Identities=14% Similarity=0.032 Sum_probs=69.7
Q ss_pred CCCCCceEEEeecCCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEec
Q 005406 92 YPDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPL 168 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl 168 (698)
.++.+|++.. ..|.++.. ..+|...+...+.... ...++.++|++..+.+-.-. -+...++.+..|+..+..
T Consensus 170 ~~~~~a~i~~--TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~ 244 (563)
T PLN02860 170 APDDAVLICF--TSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL 244 (563)
T ss_pred CCCCeEEEEe--cCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec
Confidence 4566666543 35655543 3567777765444332 34578889988777764321 223466778888887665
Q ss_pred CCCCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 169 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
+.+.+..+...+++.++.+++..+.....+..
T Consensus 245 -~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 245 -PKFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred -CCCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 56788899999999999999998877665544
No 155
>PRK08308 acyl-CoA synthetase; Validated
Probab=51.69 E-value=2.7e+02 Score=29.67 Aligned_cols=105 Identities=10% Similarity=0.055 Sum_probs=71.3
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (698)
.++..+++.- ..|.++. ...+|++.+...+..+... .++..++++...++-.- .++..+++++..|+..+.
T Consensus 99 ~~~~~~~i~~--TSGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~ 173 (414)
T PRK08308 99 LAEEPSLLQY--SSGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVI 173 (414)
T ss_pred CCCCceEEEE--CCCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEe
Confidence 4556666543 3555443 3457888887665555443 45677888777766543 445667888999998776
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHhh
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSF 202 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~ 202 (698)
.. ...++.+...+++.++.+++..+.....+...
T Consensus 174 ~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~ 207 (414)
T PRK08308 174 IT-NKNPKFALNILRNTPQHILYAVPLMLHILGRL 207 (414)
T ss_pred cC-CCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhc
Confidence 64 45677888889999999998887766655543
No 156
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=51.55 E-value=1.7e+02 Score=33.66 Aligned_cols=120 Identities=13% Similarity=-0.048 Sum_probs=70.8
Q ss_pred CCCCceEEEeecCCccCCce--EEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC
Q 005406 93 PDYKYLGTRVRVDGTVGGYK--WMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYD 170 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~ 170 (698)
++.++++.- ..|.+|..+ .+|.+.+... .+...-...+++++|++..+.+.+......+++++..|++.+..+.
T Consensus 262 ~~~~a~ily--TSGTTG~PKgV~~sh~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~ 337 (655)
T PRK03584 262 FDHPLWILY--SSGTTGLPKCIVHGHGGILLE--HLKELGLHCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDG 337 (655)
T ss_pred CCCcEEEEe--cCCCCCCCceEEECccHHHHH--HHHHHHHhcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCC
Confidence 355555443 245544433 3565544321 1111112357888998876665554333346788999999887653
Q ss_pred ---CCCHHHHHHHHhhccceEEEecccchHHHHhhh------hcCCceeEEEEeC
Q 005406 171 ---TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI------SEIPSVHLIVVVG 216 (698)
Q Consensus 171 ---~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~ii~~~ 216 (698)
...++.+..++++.++.++.+.......+.... ..++.++.++.-+
T Consensus 338 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~G 392 (655)
T PRK03584 338 SPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTG 392 (655)
T ss_pred CCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEec
Confidence 235788899999999999988777665554321 1234566555543
No 157
>PRK09274 peptide synthase; Provisional
Probab=51.01 E-value=1.2e+02 Score=34.03 Aligned_cols=97 Identities=13% Similarity=0.064 Sum_probs=65.9
Q ss_pred CCCCeEEEEecCCCC-CCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC
Q 005406 254 KPEDIATICYTSGTT-GTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTT-G~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (698)
.|+.+|++....+++ +..+-..+|.+.+...+..+... .++.++|++..+++-+..+ ....+.++..|+..+..+
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~-~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF-FALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH-HHHHHHHHHcCeEEEEcC
Confidence 456677655333222 22333368888887666554443 5788999999988865332 334677888999888766
Q ss_pred --CChhhHHHHHhhhcCcEEeech
Q 005406 330 --GDNLKLMDDLAVLKPTIFPSVP 351 (698)
Q Consensus 330 --~~~~~l~~~i~~~~~t~~~~~P 351 (698)
.....+...++..++..++..+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 4677888889999999988755
No 158
>PRK07638 acyl-CoA synthetase; Validated
Probab=50.54 E-value=2.3e+02 Score=31.03 Aligned_cols=94 Identities=10% Similarity=-0.002 Sum_probs=64.6
Q ss_pred CCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEecCCCCCHHHHHHHH
Q 005406 105 DGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPLYDTLGPDAVKYVV 181 (698)
Q Consensus 105 ~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il 181 (698)
.|.+|. ...+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|++.+.. +...++.+...+
T Consensus 152 SGtTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i 227 (487)
T PRK07638 152 SGSTGKPKAFLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKL 227 (487)
T ss_pred CCCCCCCcEEEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHH
Confidence 455443 33567776655544333 34578889988776554432 345566677789887755 567888999999
Q ss_pred hhccceEEEecccchHHHHhh
Q 005406 182 NHAEIEAIFCIPQTLNTLLSF 202 (698)
Q Consensus 182 ~~~~~~~v~~~~~~~~~~~~~ 202 (698)
++.++.+++..+.....+...
T Consensus 228 ~~~~~t~~~~~P~~~~~l~~~ 248 (487)
T PRK07638 228 ETENISVMYTVPTMLESLYKE 248 (487)
T ss_pred HHcCCeEEEeCcHHHHHHHhC
Confidence 999999999988877666554
No 159
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=50.03 E-value=92 Score=30.38 Aligned_cols=54 Identities=19% Similarity=0.111 Sum_probs=43.7
Q ss_pred HhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccc
Q 005406 131 LFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEI 186 (698)
Q Consensus 131 ~~~gv~~g~~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~ 186 (698)
...|+.++|++. .+|-.- .+...+++++..|++.+.+ +++.++++...+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 567889999988 777553 4445789999999998887 68999999998888765
No 160
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=49.33 E-value=1.7e+02 Score=32.21 Aligned_cols=93 Identities=14% Similarity=0.043 Sum_probs=67.7
Q ss_pred CCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEecCCCCCHHHHHHHH
Q 005406 105 DGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVPLYDTLGPDAVKYVV 181 (698)
Q Consensus 105 ~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il 181 (698)
.|.++. ...+|+..+...+..+... .++.++|++...++-... .+..+++++..|+.++.. +...++.+...+
T Consensus 170 SGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i 245 (515)
T TIGR03098 170 SGSTGRPKGVVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKAL 245 (515)
T ss_pred CCCCCCCceEEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHH
Confidence 444443 3567888887766655543 367889998888876542 234667888999988855 456788999999
Q ss_pred hhccceEEEecccchHHHHh
Q 005406 182 NHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 182 ~~~~~~~v~~~~~~~~~~~~ 201 (698)
++.++.++...+.....+..
T Consensus 246 ~~~~~t~~~~~P~~~~~l~~ 265 (515)
T TIGR03098 246 EKHGITGLAAVPPLWAQLAQ 265 (515)
T ss_pred HHcCCceEecChHHHHHHHh
Confidence 99999999998877666554
No 161
>PRK06188 acyl-CoA synthetase; Validated
Probab=44.93 E-value=2.8e+02 Score=30.65 Aligned_cols=102 Identities=15% Similarity=0.002 Sum_probs=69.9
Q ss_pred CCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC
Q 005406 94 DYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT 171 (698)
Q Consensus 94 d~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~ 171 (698)
+++|++.. ..|.++. ...+|+..+...+.. .....++..++++...++-+..+...+++.+..|+..+... .
T Consensus 168 ~~~a~i~~--TSGtTG~pk~v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~ 241 (524)
T PRK06188 168 PDIAGLAY--TGGTTGKPKGVMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-K 241 (524)
T ss_pred CCeEEEEe--CCCCCCCCceeeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-C
Confidence 33554433 2444443 345778777655543 33445788889888888776655556677788898877765 4
Q ss_pred CCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 172 LGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 172 ~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
..++.+...++..++.+++..+.....+..
T Consensus 242 ~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~ 271 (524)
T PRK06188 242 FDPAEVLRAIEEQRITATFLVPTMIYALLD 271 (524)
T ss_pred CCHHHHHHHHHHhCCEEEEehHHHHHHHHh
Confidence 668889999999999999988776655544
No 162
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=44.84 E-value=3.6e+02 Score=30.06 Aligned_cols=103 Identities=15% Similarity=-0.026 Sum_probs=69.4
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (698)
.++.+|++.. ..|.++. ...+|+..+...+... ....++++++++....+-+- .++..+++++..|+.++.
T Consensus 195 ~~~~~a~i~~--TSGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~ 269 (547)
T PRK13295 195 GPDDVTQLIY--TSGTTGEPKGVMHTANTLMANIVPY---AERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVL 269 (547)
T ss_pred CCcceeEEEe--CCCCCCCCCEEEeccHHHHHHHHHH---HHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEe
Confidence 3455665543 2555554 3356777776554443 34457888998887777653 345567788889998776
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHH
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLL 200 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 200 (698)
. +...++.+...+++.++.+++........+.
T Consensus 270 ~-~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~ 301 (547)
T PRK13295 270 Q-DIWDPARAAELIRTEGVTFTMASTPFLTDLT 301 (547)
T ss_pred C-CCCCHHHHHHHHHHcCCcEEEecHHHHHHHH
Confidence 5 4567889999999999999888766555444
No 163
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=44.57 E-value=98 Score=32.74 Aligned_cols=65 Identities=14% Similarity=0.117 Sum_probs=50.4
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC-----CCCHHHHHHHHhhccceEEEe
Q 005406 123 RKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYD-----TLGPDAVKYVVNHAEIEAIFC 191 (698)
Q Consensus 123 ~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~-----~~~~~~l~~il~~~~~~~v~~ 191 (698)
...+.-.|+.+++++||-|.+ .+.-|+.+.=++...|+.+|.+|- +++++.++..|... .|+|+.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 445556677778999996654 577899999999999999998853 35888999888875 566654
No 164
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=44.37 E-value=1.2e+02 Score=33.87 Aligned_cols=87 Identities=14% Similarity=0.138 Sum_probs=68.5
Q ss_pred eeeechHHHHHHHHhccccc-----ccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCc
Q 005406 273 GAVLTHGNLISNVAGFSLMV-----QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPT 345 (698)
Q Consensus 273 gV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t 345 (698)
|..+|++.+...+..++..+ ++..+|++...+|-..-+ ....++++..|+.+.-.. .+..++...++..++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~-~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF-VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 88999999877766655542 378899999999977533 334567788888876655 6899999999999999
Q ss_pred EEeechHHHHHHHHH
Q 005406 346 IFPSVPRLYNRIYAG 360 (698)
Q Consensus 346 ~~~~~P~~~~~l~~~ 360 (698)
+++.....+..+.+.
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999999888887664
No 165
>PLN03052 acetate--CoA ligase; Provisional
Probab=43.71 E-value=1.9e+02 Score=33.92 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=68.4
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|++.-..+.-|.+ ...+|.+.+...+..+.. ..++.++|++..++|..--+ ....++++..|+..+...
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~-via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA-VIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHcCCEEEeeCC
Confidence 467777654332221222 245888888766655444 36889999999999975322 344677788888887765
Q ss_pred -CChhhHHHHHhhhcCcEEeechHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~ 353 (698)
..+..+...++..++.+++.....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCcc
Confidence 678899999999999999887643
No 166
>PLN02736 long-chain acyl-CoA synthetase
Probab=43.68 E-value=2.3e+02 Score=32.67 Aligned_cols=103 Identities=10% Similarity=-0.093 Sum_probs=70.5
Q ss_pred CCCCeEEEEe--cCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEe
Q 005406 254 KPEDIATICY--TSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY 328 (698)
Q Consensus 254 ~~~~~a~i~~--TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~ 328 (698)
.|+.+++..- ..|.+|. -..+|.+.+...+..+.. ..++.++|++..++|-..-+ ....++++..|+.++.+
T Consensus 57 ~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl 133 (651)
T PLN02736 57 FRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPL 133 (651)
T ss_pred CCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEe
Confidence 4566665321 2333322 244788887766655444 36889999999888866432 23356778889888766
Q ss_pred C--CChhhHHHHHhhhcCcEEeechHHHHHHHH
Q 005406 329 Q--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYA 359 (698)
Q Consensus 329 ~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~ 359 (698)
. ..+..+...++..++.+++..+..+..+..
T Consensus 134 ~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~ 166 (651)
T PLN02736 134 YDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLS 166 (651)
T ss_pred ecCCCHHHHHHHHhccCCCEEEECHHHHHHHHH
Confidence 5 578899999999999999998877665544
No 167
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.27 E-value=2.3e+02 Score=31.68 Aligned_cols=106 Identities=11% Similarity=-0.046 Sum_probs=66.3
Q ss_pred CCCCCceEEEeecCCccCCc--eEEeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCCHh-HHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLL-FHGLQKGVRIGLYLINRPE-WLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~n~~e-~~~~~lA~~~~G~~~vp 167 (698)
.++.++++.- ..|.++.. ..+|...+... ..+..+. ..++.++|++..+.+-.-. .....++++..|+.++.
T Consensus 174 ~~~~~~~i~~--TSGTTG~PK~v~~s~~~~~~~--~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~ 249 (539)
T PRK07008 174 DENQASSLCY--TSGTTGNPKGALYSHRSTVLH--AYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVL 249 (539)
T ss_pred CcccceEEEE--CCCCCCCCcEEEEecHHHHHH--HHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEE
Confidence 3444544332 25555543 34565555322 2222332 3577888988776654322 23334677889998887
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
..+...++.+..++++.++..+...+.....+..
T Consensus 250 ~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~ 283 (539)
T PRK07008 250 PGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLN 283 (539)
T ss_pred ecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHh
Confidence 7777888999999999999999887776655543
No 168
>PLN03102 acyl-activating enzyme; Provisional
Probab=42.87 E-value=1.7e+02 Score=33.16 Aligned_cols=94 Identities=12% Similarity=0.052 Sum_probs=67.1
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|.+. .+ -.+|.+.+...+..+... .++.++|++..++|-.-. .....++++..|+.++..+
T Consensus 27 ~p~~~Al~~--~~-------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e-~~~~~la~~~~G~~~vpl~~ 96 (579)
T PLN03102 27 YPNRTSIIY--GK-------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPA-MYEMHFAVPMAGAVLNPINT 96 (579)
T ss_pred CCCCeEEEE--CC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEeeccc
Confidence 466777553 11 258888887766555443 578899999999885432 2334667888888887766
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...++..+++.++..+.....+
T Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (579)
T PLN03102 97 RLDATSIAAILRHAKPKILFVDRSFEPLA 125 (579)
T ss_pred cCCHHHHHHHHhccCCeEEEEChhhHHHH
Confidence 5788999999999999999876655433
No 169
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=42.40 E-value=2e+02 Score=33.11 Aligned_cols=94 Identities=17% Similarity=0.106 Sum_probs=66.4
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.++.+|++.-.-+ .+ ....+|.+.+...+..+.. ..++.++|++..++|..--+ ....++++..|+..+...
T Consensus 74 ~~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~ 149 (647)
T PTZ00237 74 KRDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLFD 149 (647)
T ss_pred CCCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCC
Confidence 3566776543221 11 2356899988766655544 36899999999999977432 334667788888876655
Q ss_pred -CChhhHHHHHhhhcCcEEeech
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVP 351 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P 351 (698)
..+..+...++..++.+++...
T Consensus 150 ~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 150 GYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcc
Confidence 6889999999999999998764
No 170
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=42.28 E-value=2.2e+02 Score=31.09 Aligned_cols=103 Identities=17% Similarity=0.049 Sum_probs=68.8
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH-hHHHHHHHHHhcCCeEEecC
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP-EWLIVDHACSAYSYISVPLY 169 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~-e~~~~~lA~~~~G~~~vpl~ 169 (698)
++.++++.. ..|.++. ...+|++.+...+... ....++.++|++...++-.- ..+..+++.+..|+.++..+
T Consensus 140 ~~~~a~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 214 (483)
T PRK03640 140 LDEVATIMY--TSGTTGKPKGVIQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE 214 (483)
T ss_pred CCCeEEEEe--CCCcCCCCcEEEEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC
Confidence 345555433 2454443 3467888776544332 23368899999888876432 22334577778899877654
Q ss_pred CCCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 170 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
...+..+...+++.++.++...+.....+.+
T Consensus 215 -~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 245 (483)
T PRK03640 215 -KFDAEKINKLLQTGGVTIISVVSTMLQRLLE 245 (483)
T ss_pred -CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 5788999999999999999998877665543
No 171
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=41.11 E-value=4e+02 Score=31.08 Aligned_cols=118 Identities=13% Similarity=0.011 Sum_probs=73.5
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CHhHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLIN--RPEWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~e~~~~~lA~~~~G~~~vp 167 (698)
.++.+|++.- ..|.++. ...+|++.+...+..+.. ..++.++|++...+|- ...+...+++.+..|+.++.
T Consensus 363 ~~~d~a~i~~--TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 363 QPEDAALILF--TSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCeEEEEE--CCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 3455665443 3555553 346788888766655443 3478899988877764 23444567888889998886
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhh--cCCceeEEEE
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS--EIPSVHLIVV 214 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~ii~ 214 (698)
.........+...+.+.++.+++........+..... .++.++.++.
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~lr~i~~ 486 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFARLRYVVA 486 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcCcccccceEEEEE
Confidence 6544455667778889999988876655443322211 2345555444
No 172
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=40.37 E-value=2e+02 Score=32.82 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=67.6
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|++.... .+|. .-.+|.+.+...+..+.. ..++.++|++..++|..-.+ ....++++..|+..+...
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA-AIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEeccCC
Confidence 567788764322 1222 456888888766554444 36789999999999866432 344667888898877665
Q ss_pred -CChhhHHHHHhhhcCcEEeechH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPR 352 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~ 352 (698)
..+..+...++..++.+++....
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 57888999999999999988664
No 173
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=40.29 E-value=51 Score=31.17 Aligned_cols=34 Identities=9% Similarity=0.264 Sum_probs=29.8
Q ss_pred ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEE
Q 005406 111 YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLY 144 (698)
Q Consensus 111 ~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~ 144 (698)
...+||.++.+.+.++|..+.+.|.+|.-.|+|.
T Consensus 4 ~~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 4 KLYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred eEEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 4679999999999999999999999998666664
No 174
>PLN02654 acetate-CoA ligase
Probab=40.02 E-value=2.2e+02 Score=33.04 Aligned_cols=96 Identities=18% Similarity=0.171 Sum_probs=67.2
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.++.+|++.... -.| ....+|.+.+...+..+.. ..++.++|++..++|..--+ ....++++..|+..+...
T Consensus 102 ~~~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~-v~a~lA~~~~Gav~vpv~~ 177 (666)
T PLN02654 102 NGDKIAIYWEGN-EPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL-PIAMLACARIGAVHSVVFA 177 (666)
T ss_pred CCCCEEEEEEcC-CCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCC
Confidence 456777653221 111 1356899988766655544 36889999999999876422 334667788898877665
Q ss_pred -CChhhHHHHHhhhcCcEEeechHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~ 353 (698)
.....+...++..++.++++....
T Consensus 178 ~~~~~~l~~~l~~~~~~~li~~~~~ 202 (666)
T PLN02654 178 GFSAESLAQRIVDCKPKVVITCNAV 202 (666)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCcc
Confidence 688899999999999999876553
No 175
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=39.64 E-value=2.9e+02 Score=31.62 Aligned_cols=119 Identities=14% Similarity=0.102 Sum_probs=71.8
Q ss_pred CCCCceEEEeecCCccCCce--EEeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCCHh--HHHHHHHHHhcCCeEEe
Q 005406 93 PDYKYLGTRVRVDGTVGGYK--WMTYGEVSAARKEIGSGLL-FHGLQKGVRIGLYLINRPE--WLIVDHACSAYSYISVP 167 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~n~~e--~~~~~lA~~~~G~~~vp 167 (698)
++.++++.- ..|.+|..+ .+|.+.+.. .++..+. ..+++++|++...++-+.. ....+++.+..|++.+.
T Consensus 231 ~~~~a~ily--TSGTTG~PKgV~~sh~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~ 305 (628)
T TIGR02316 231 SNEPSYILY--TSGTTGKPKGVQRDVGGYAV---ALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVL 305 (628)
T ss_pred CCCcEEEEE--CCCCCCCCceEEECCcHHHH---HHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEE
Confidence 456665543 255544433 345444321 2222222 3578899987766654432 23457888999998876
Q ss_pred cCC---CCCHHHHHHHHhhccceEEEecccchHHHHhhh------hcCCceeEEEEeC
Q 005406 168 LYD---TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI------SEIPSVHLIVVVG 216 (698)
Q Consensus 168 l~~---~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~ii~~~ 216 (698)
... ...+..+..++++.++.++++.+.....+.... ..++.++.++.-+
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG 363 (628)
T TIGR02316 306 YEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAG 363 (628)
T ss_pred eCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEec
Confidence 552 235678889999999999999887766554421 1245566655543
No 176
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=39.37 E-value=1.4e+02 Score=23.35 Aligned_cols=64 Identities=20% Similarity=0.227 Sum_probs=51.1
Q ss_pred EeHHHHHHHHHHHHH---HHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceE
Q 005406 114 MTYGEVSAARKEIGS---GLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEA 188 (698)
Q Consensus 114 ~Ty~el~~~~~~la~---~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~ 188 (698)
.||+||.+.-..++. +|....+...|-|+|+.-++.. ..-++.|+...+.++++.-+++.++++
T Consensus 10 ~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 10 ATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred eeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchh
Confidence 799999988877665 4555677888899999877653 345678888899999999999988875
No 177
>PRK05857 acyl-CoA synthetase; Validated
Probab=39.33 E-value=1.7e+02 Score=32.79 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=66.1
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++++.. .| ...+|.+.+...+..+... .++.++|++..+++-...+ +...++++..|+..+..+
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~-~~~~lA~~~~G~v~v~l~~ 98 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET-YLSVLACAKLGAIAVMADG 98 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCc
Confidence 4677776542 22 1458999887666555543 5788999999988766543 444677888999988776
Q ss_pred -CChhhHHHHHhhhcCcEEeechHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~ 353 (698)
.....+...++..++..++..+..
T Consensus 99 ~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 99 NLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cCCHHHHHHHHHhcCCceEEEeccc
Confidence 477788888888999888877654
No 178
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=39.23 E-value=2.1e+02 Score=32.85 Aligned_cols=95 Identities=13% Similarity=0.104 Sum_probs=67.7
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|++.... . ......+|.+.+...+..+... .++.++|++..++|-.-.+ ....++++..|+..+...
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCC
Confidence 467888764321 1 1135678999987776555443 5788999999998866432 334667888898888766
Q ss_pred -CChhhHHHHHhhhcCcEEeechH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPR 352 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~ 352 (698)
.....+...++..++.+++....
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 57888999999999999987654
No 179
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=38.36 E-value=83 Score=33.22 Aligned_cols=65 Identities=15% Similarity=0.102 Sum_probs=44.7
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHhhccceEEEec
Q 005406 124 KEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIFCI 192 (698)
Q Consensus 124 ~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~il~~~~~~~v~~~ 192 (698)
..+-..|..+|+++||.|.+- ..-|..+.-|+..+|+.+|.++-+ +.++.++..+..-. ++|+..
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 345556677899999988875 455677888999999999888543 57788888877544 555543
No 180
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=38.06 E-value=94 Score=27.58 Aligned_cols=46 Identities=9% Similarity=-0.080 Sum_probs=35.0
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCC---CHhHHHHHHHHHhcCCeEEec
Q 005406 123 RKEIGSGLLFHGLQKGVRIGLYLIN---RPEWLIVDHACSAYSYISVPL 168 (698)
Q Consensus 123 ~~~la~~L~~~gv~~g~~V~i~~~n---~~e~~~~~lA~~~~G~~~vpl 168 (698)
.+.++..|.+.|+.+++.|.+++.. +.....+++++-.+|..-|-|
T Consensus 80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~i 128 (138)
T cd01445 80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAI 128 (138)
T ss_pred HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEE
Confidence 3467778889999999999999975 566666777788888765533
No 181
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=37.62 E-value=2.6e+02 Score=31.29 Aligned_cols=83 Identities=8% Similarity=-0.102 Sum_probs=63.7
Q ss_pred eechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEee
Q 005406 275 VLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPS 349 (698)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~ 349 (698)
.+|.+.+...+..+... .++.+++++..+.|-...+ ....+.++..|+..+..+ .....+...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 57888877666555443 5788899999888876544 445778888999988776 57788999999999999999
Q ss_pred chHHHHHHH
Q 005406 350 VPRLYNRIY 358 (698)
Q Consensus 350 ~P~~~~~l~ 358 (698)
.+..+..+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 887766553
No 182
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=37.59 E-value=14 Score=19.17 Aligned_cols=9 Identities=56% Similarity=0.940 Sum_probs=7.1
Q ss_pred ccCcchhcc
Q 005406 442 GYGMTETSC 450 (698)
Q Consensus 442 ~YG~TE~~~ 450 (698)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 699998764
No 183
>PRK08316 acyl-CoA synthetase; Validated
Probab=37.18 E-value=2.5e+02 Score=30.94 Aligned_cols=96 Identities=14% Similarity=-0.053 Sum_probs=67.8
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|.+.. +..+|...+...+..+.. ..++.++|++..++|-... .....++++..|+..+..+
T Consensus 24 ~~~~~a~~~~---------~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~ 93 (523)
T PRK08316 24 YPDKTALVFG---------DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNF 93 (523)
T ss_pred CCCCeEEEEC---------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEeccc
Confidence 3566665542 156788887666544433 2578889999888876653 3444677888898887776
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRIYA 359 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~ 359 (698)
.....+...++..++..++........+.+
T Consensus 94 ~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~ 124 (523)
T PRK08316 94 MLTGEELAYILDHSGARAFLVDPALAPTAEA 124 (523)
T ss_pred ccCHHHHHHHHHhCCCCEEEEccchHHHHHH
Confidence 477888889999999999988877665543
No 184
>PRK06839 acyl-CoA synthetase; Validated
Probab=37.16 E-value=2.8e+02 Score=30.37 Aligned_cols=94 Identities=12% Similarity=-0.036 Sum_probs=67.9
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc----cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM----VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (698)
.|+.+|++. .+..+|+..+...+..+... .++.+++++...++-... .....++++..|+..+..+
T Consensus 15 ~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecC
Confidence 456777653 14578998887766555443 467899999988877743 2334667788898888776
Q ss_pred --CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 --GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 --~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...++..+++.++..+.....+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 4778888889999999999887765444
No 185
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=36.50 E-value=2.7e+02 Score=31.85 Aligned_cols=94 Identities=18% Similarity=0.195 Sum_probs=65.5
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|++. .+..+|. .-.+|.+.+...+..+.. ..++.++|++..++|..-.+ ....++++..|+..+...
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA-AFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCC
Confidence 467777654 3322232 346788888766544443 36889999999998876322 334667788888877665
Q ss_pred -CChhhHHHHHhhhcCcEEeech
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVP 351 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P 351 (698)
.....+...++..++.++++..
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 5778899999999999988764
No 186
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=35.75 E-value=2.8e+02 Score=30.58 Aligned_cols=99 Identities=10% Similarity=-0.088 Sum_probs=68.2
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|++.-.. .|.. -.+|...+...+..+.. ..++.++|++..+.|-+..+ ....++++..|+..+..+
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCc
Confidence 467777654321 1211 24688777666554443 35788999999988876543 234667888898888766
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...++..++..++..+.....+
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 5788899999999999999887655433
No 187
>PRK13388 acyl-CoA synthetase; Provisional
Probab=35.46 E-value=2.8e+02 Score=31.00 Aligned_cols=94 Identities=9% Similarity=-0.091 Sum_probs=66.7
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---ccc-CCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQF-YPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~-~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (698)
.|+.+|++. .+..+|+..+...+..+... .++ .++|++..++|-...+ ....++++..|+..+..+
T Consensus 14 ~p~~~Al~~---------~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~ 83 (540)
T PRK13388 14 GDDTIAVRY---------GDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLN 83 (540)
T ss_pred cCCceEEEE---------CCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEec
Confidence 357777543 12367888887766655443 467 6889998888865433 334677888999888776
Q ss_pred --CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 --GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 --~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...+++.++..++........+
T Consensus 84 p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 113 (540)
T PRK13388 84 TTRRGAALAADIRRADCQLLVTDAEHRPLL 113 (540)
T ss_pred ccCChHHHHHHHHhcCCCEEEEChhhhHHH
Confidence 4677899999999999999877665443
No 188
>PLN02246 4-coumarate--CoA ligase
Probab=35.09 E-value=2.6e+02 Score=31.08 Aligned_cols=96 Identities=9% Similarity=-0.009 Sum_probs=66.2
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++++..- ++-.+|+..+...+..+... .++.++|++..+++-+. -.....+.++..|+..+..+
T Consensus 36 ~~~~~a~~~~~-------~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLIDGA-------TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEEecC-------CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCC
Confidence 46777765321 12468898887665544443 57889999998887663 22333567788888888766
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...++..++..++........+
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 5778888899999999988776655544
No 189
>PRK07798 acyl-CoA synthetase; Validated
Probab=34.54 E-value=3.1e+02 Score=30.22 Aligned_cols=95 Identities=14% Similarity=0.018 Sum_probs=65.2
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++.+. ++-.+|...+...+..+.. ..++.++|++..+++-.-.+ ....++++..|+..+..+
T Consensus 16 ~p~~~a~~~---------~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~-~~~~~a~~~~G~~~v~l~~ 85 (533)
T PRK07798 16 VPDRVALVC---------GDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEY-VEAMLGAFKARAVPVNVNY 85 (533)
T ss_pred CCCceEEEE---------CCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCeEEEecCc
Confidence 356666554 2346888887665554443 35788899988887654322 334567788898888776
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRIY 358 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l~ 358 (698)
.....+...++..++..++........+.
T Consensus 86 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 115 (533)
T PRK07798 86 RYVEDELRYLLDDSDAVALVYEREFAPRVA 115 (533)
T ss_pred CCCHHHHHHHHhhcCCCEEEEchhhHHHHH
Confidence 46788888999999999988776655543
No 190
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=34.53 E-value=63 Score=30.04 Aligned_cols=34 Identities=18% Similarity=0.107 Sum_probs=26.5
Q ss_pred cchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEc
Q 005406 557 APEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAV 591 (698)
Q Consensus 557 ~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~ 591 (698)
-..+|++.+.+.|+|.+|.|+-.. ...+||+-+.
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~-~~a~Vav~~~ 109 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTD-DNAYVAVDLD 109 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEEC-CEEEEEEEec
Confidence 357899999999999999888754 5666676655
No 191
>PRK13391 acyl-CoA synthetase; Provisional
Probab=34.34 E-value=3e+02 Score=30.32 Aligned_cols=96 Identities=10% Similarity=0.014 Sum_probs=68.7
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++.+...+| -.+|...+...+..+... .++.+++++..+.+-...+ +...+.++..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecccc
Confidence 4677777665443 248888876665544443 5788899998888766433 334667888898888776
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...++..++..++..+.....+
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 4778899999999999998887765544
No 192
>PRK07787 acyl-CoA synthetase; Validated
Probab=34.26 E-value=6e+02 Score=27.60 Aligned_cols=116 Identities=13% Similarity=0.015 Sum_probs=74.2
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--CHhHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLIN--RPEWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~e~~~~~lA~~~~G~~~vp 167 (698)
.++.+|++.- ..|.++. .-.+|+..+...+..++.. .++.+++++...++- ...+...+++++..|+.++.
T Consensus 126 ~~~~~a~i~~--TSGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 200 (471)
T PRK07787 126 DPDAPALIVY--TSGTTGPPKGVVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVH 200 (471)
T ss_pred CCCceEEEEE--CCCCCCCCCEEEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEe
Confidence 4566666543 3555543 3457888887766555543 467788877655543 23445667888999999886
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHhhh---hcCCceeEEEE
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI---SEIPSVHLIVV 214 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~ii~ 214 (698)
.. ...++.+...++ .++.++.+.+.....+.... ..++.++.++.
T Consensus 201 ~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~~~l~~l~~~~~ 248 (471)
T PRK07787 201 TG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAARALRGARLLVS 248 (471)
T ss_pred cC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccccccccceeEEEE
Confidence 64 467888889998 89998888777665554321 23344554443
No 193
>PRK05852 acyl-CoA synthetase; Validated
Probab=33.96 E-value=6.9e+02 Score=27.67 Aligned_cols=94 Identities=13% Similarity=-0.012 Sum_probs=64.8
Q ss_pred CCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--HhHHHHHHHHHhcCCeEEe-cCCCCCHHHHHH
Q 005406 105 DGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINR--PEWLIVDHACSAYSYISVP-LYDTLGPDAVKY 179 (698)
Q Consensus 105 ~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~--~e~~~~~lA~~~~G~~~vp-l~~~~~~~~l~~ 179 (698)
.|..+.. ..+|+..+...+..+...+ +++++|++..+.+-. ..++..+++++..|.+.+. -...+.+..+..
T Consensus 185 SGTTG~PKgv~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~ 261 (534)
T PRK05852 185 GGTTGLPKMVPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWD 261 (534)
T ss_pred CCCCCCCcEEEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHH
Confidence 4544432 3468888776666555433 678899877776654 3566677888888776553 234567788888
Q ss_pred HHhhccceEEEecccchHHHHh
Q 005406 180 VVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 180 il~~~~~~~v~~~~~~~~~~~~ 201 (698)
.+++.++..++..+.....+..
T Consensus 262 ~i~~~~~t~~~~~P~~~~~l~~ 283 (534)
T PRK05852 262 DIKAVGATWYTAVPTIHQILLE 283 (534)
T ss_pred HHHHcCCcEEEcChHHHHHHHh
Confidence 9999999999988877666554
No 194
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=33.86 E-value=3e+02 Score=30.36 Aligned_cols=102 Identities=11% Similarity=-0.098 Sum_probs=68.9
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh--HHHHHHHHHhcCCeEEec
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE--WLIVDHACSAYSYISVPL 168 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e--~~~~~lA~~~~G~~~vpl 168 (698)
++.++++.- ..|.++. ...+|++.+...+.... ....+++++|++...++-... +...+++.+..|+.++..
T Consensus 160 ~~~~a~i~~--TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~ 235 (508)
T TIGR02262 160 ADDPAFWLY--SSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLM 235 (508)
T ss_pred CCCcEEEEe--CCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEe
Confidence 556665543 2444443 34567777765543322 234588999988777665443 334566778899988887
Q ss_pred CCCCCHHHHHHHHhhccceEEEecccchHH
Q 005406 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNT 198 (698)
Q Consensus 169 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~~ 198 (698)
.....++.+...|++.++.+++..+.....
T Consensus 236 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 236 GERPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred CCCCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 777788899999999999999988765443
No 195
>PRK07514 malonyl-CoA synthase; Validated
Probab=33.57 E-value=3.3e+02 Score=29.88 Aligned_cols=85 Identities=14% Similarity=0.054 Sum_probs=61.8
Q ss_pred eeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEE
Q 005406 273 GAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIF 347 (698)
Q Consensus 273 gV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~ 347 (698)
+..+|...+...+..+.. ..++.++|++....+-.. -.....++++..|+..+..+ .....+...++..++.++
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 456888887655544443 367889999988887663 22334567788898888766 467888899999999999
Q ss_pred eechHHHHHHH
Q 005406 348 PSVPRLYNRIY 358 (698)
Q Consensus 348 ~~~P~~~~~l~ 358 (698)
+..+.....+.
T Consensus 105 i~~~~~~~~~~ 115 (504)
T PRK07514 105 VCDPANFAWLS 115 (504)
T ss_pred EEccchhHHHH
Confidence 88887765543
No 196
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=33.49 E-value=3.1e+02 Score=31.59 Aligned_cols=92 Identities=17% Similarity=0.183 Sum_probs=64.8
Q ss_pred CCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--C
Q 005406 256 EDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--G 330 (698)
Q Consensus 256 ~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~ 330 (698)
++++++.... +|. ...+|.+.+...+..+... .++.++|++..++|..--+ ....++++..|+..+... .
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~-~~~~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA-VVAMLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCeEEEecCCCC
Confidence 4566555322 232 3468888887666555443 6889999999999876322 334667888888877665 5
Q ss_pred ChhhHHHHHhhhcCcEEeechH
Q 005406 331 DNLKLMDDLAVLKPTIFPSVPR 352 (698)
Q Consensus 331 ~~~~l~~~i~~~~~t~~~~~P~ 352 (698)
....+...++..++.++++...
T Consensus 174 ~~~~l~~~l~~~~~k~li~~~~ 195 (652)
T TIGR01217 174 GARGVLDRFQQIEPKLLFTVDG 195 (652)
T ss_pred CHHHHHHHHHhcCCcEEEEccc
Confidence 7888999999999999887653
No 197
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=33.39 E-value=3.4e+02 Score=27.33 Aligned_cols=90 Identities=13% Similarity=0.076 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCC----CHHHHHHHHhhccceEEEecccch
Q 005406 121 AARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTL----GPDAVKYVVNHAEIEAIFCIPQTL 196 (698)
Q Consensus 121 ~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~----~~~~l~~il~~~~~~~v~~~~~~~ 196 (698)
.|+..||..|++.| -.|..++.+....... .+...|..+..+.... ..+++..++++.+++++++|.-..
T Consensus 18 ~Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQG----AEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHCC----CEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 46788999997754 4677777766554433 3467888877775443 244688899999999999997432
Q ss_pred -HHHHhhhhcCCceeEEEEeCCC
Q 005406 197 -NTLLSFISEIPSVHLIVVVGGK 218 (698)
Q Consensus 197 -~~~~~~~~~~~~~~~ii~~~~~ 218 (698)
.......+. ....++++++.
T Consensus 92 ~~~~~~~~k~--~~~~l~~iDD~ 112 (279)
T TIGR03590 92 DADWEKLIKE--FGRKILVIDDL 112 (279)
T ss_pred CHHHHHHHHH--hCCeEEEEecC
Confidence 223332221 12345666654
No 198
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=33.36 E-value=1.4e+02 Score=31.65 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=39.1
Q ss_pred HHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHhhccceEEEec
Q 005406 130 LLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIFCI 192 (698)
Q Consensus 130 L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~il~~~~~~~v~~~ 192 (698)
+...++++||.|.+-. +.|.....++...|+.+++++.+ ...+.++..+.. +.++|+..
T Consensus 63 l~al~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHcCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 4445789999887744 44556666777889888777533 456677776653 56666543
No 199
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=33.15 E-value=33 Score=23.79 Aligned_cols=26 Identities=23% Similarity=0.567 Sum_probs=21.7
Q ss_pred EEEEecCCCCCHHHHHHHHHHhCCce
Q 005406 414 RFMGSGASPLSPDVMDFLKVCFGCQV 439 (698)
Q Consensus 414 r~i~~gG~~l~~~~~~~~~~~~g~~l 439 (698)
+++.++|.|++.++-..++..||-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 46889999999999999888776543
No 200
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.03 E-value=2.9e+02 Score=31.13 Aligned_cols=94 Identities=14% Similarity=-0.010 Sum_probs=67.7
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|.+.. + -.+|+..+...+...... .++..+|++..++|-...+ ....++++..|+..+..+
T Consensus 45 ~p~~~a~~~~-----~----~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 114 (573)
T PRK05605 45 FGDRPALDFF-----G----ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEHNP 114 (573)
T ss_pred CCCCeEEEeC-----C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCc
Confidence 4567776542 1 247888887665554443 5788999999988876542 334677888888888765
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...+.+.++..++.....+..+
T Consensus 115 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 115 LYTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred CCCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 5788899999999999999877765544
No 201
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=32.83 E-value=3.1e+02 Score=31.08 Aligned_cols=95 Identities=12% Similarity=0.086 Sum_probs=67.9
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|.+.- .-.+|++.+...+..+... .++.++|++..+++-...+ ....++++..|+..+..+
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~ 119 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNT 119 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCC
Confidence 4667776541 2357888887665544433 5788999999988766433 344677888898887776
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRIY 358 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l~ 358 (698)
.....+...++..++..++........+.
T Consensus 120 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 149 (600)
T PRK08279 120 QQRGAVLAHSLNLVDAKHLIVGEELVEAFE 149 (600)
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHHH
Confidence 46778888999999999998877655543
No 202
>PLN02565 cysteine synthase
Probab=32.58 E-value=3.2e+02 Score=28.26 Aligned_cols=72 Identities=10% Similarity=-0.004 Sum_probs=52.2
Q ss_pred HHHHHHHHHhCCC-CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEeccc
Q 005406 123 RKEIGSGLLFHGL-QKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ 194 (698)
Q Consensus 123 ~~~la~~L~~~gv-~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~ 194 (698)
+..+-..+.+.|. .+|....|....+---+.+-++|..+|..++.+-|...+..-...++..++++++++..
T Consensus 50 A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 50 GYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 3333444445564 78865445555666666677788889998888877777888888999999999998753
No 203
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.05 E-value=2.9e+02 Score=31.07 Aligned_cols=93 Identities=15% Similarity=0.101 Sum_probs=66.4
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc----cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM----VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (698)
.|+.+|.+. . +..+|++.+...+..+... .++.++|++..++|-...+ ....++++..|+..+..+
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~ 106 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTN 106 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecC
Confidence 456677653 1 2458999887776655543 3678999999998876432 334667888898888766
Q ss_pred --CChhhHHHHHhhhcCcEEeechHHHHH
Q 005406 330 --GDNLKLMDDLAVLKPTIFPSVPRLYNR 356 (698)
Q Consensus 330 --~~~~~l~~~i~~~~~t~~~~~P~~~~~ 356 (698)
.....+...++..++..++........
T Consensus 107 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 135 (562)
T PRK05677 107 PLYTAREMEHQFNDSGAKALVCLANMAHL 135 (562)
T ss_pred CCCCHHHHHHHHhccCceEEEEecchhhh
Confidence 577889999999999999876655443
No 204
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=31.79 E-value=2.3e+02 Score=31.63 Aligned_cols=96 Identities=10% Similarity=0.149 Sum_probs=67.5
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++.+.... +..+|++.+...+..+... .++.++|++..++|-...+ ....++++..|+..+..+
T Consensus 41 ~p~~~a~~~~~~-------~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~ 112 (546)
T PLN02330 41 YADKVAFVEAVT-------GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANP 112 (546)
T ss_pred CCCccEEEecCC-------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCc
Confidence 467777653221 2468999887666555443 5788899998888766533 234677888899877665
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...++..++..++..+..+..+
T Consensus 113 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 141 (546)
T PLN02330 113 TALESEIKKQAEAAGAKLIVTNDTNYGKV 141 (546)
T ss_pred cCCHHHHHHHHHhcCCeEEEEccchhhhH
Confidence 4667888999999999998877665544
No 205
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.51 E-value=2.9e+02 Score=30.82 Aligned_cols=84 Identities=7% Similarity=-0.038 Sum_probs=61.8
Q ss_pred eechHHHHHHHHhcccc---c-ccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEe
Q 005406 275 VLTHGNLISNVAGFSLM---V-QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (698)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~-~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~ 348 (698)
.+|...+...+..+... . ++.++|++..+++-.- -.+...++++..|+..+..+ .....+...++..+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSP-QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 47888876665544433 3 8889999998888553 33444677888898888776 4778899999999999998
Q ss_pred echHHHHHHHH
Q 005406 349 SVPRLYNRIYA 359 (698)
Q Consensus 349 ~~P~~~~~l~~ 359 (698)
..+.....+.+
T Consensus 114 ~~~~~~~~~~~ 124 (546)
T PRK08314 114 VGSELAPKVAP 124 (546)
T ss_pred EccchhhhHHH
Confidence 88776655543
No 206
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=31.50 E-value=1.7e+02 Score=31.00 Aligned_cols=57 Identities=12% Similarity=0.064 Sum_probs=38.4
Q ss_pred HhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHhhccceEEEe
Q 005406 131 LFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIFC 191 (698)
Q Consensus 131 ~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~il~~~~~~~v~~ 191 (698)
...++++||.|.+-.+. |.....++...|+.++.++.+ +..+.++..+.. +.++|+.
T Consensus 64 ~~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HHhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 34468899988775544 445566677889987777532 457788877754 5666654
No 207
>PRK07470 acyl-CoA synthetase; Validated
Probab=30.83 E-value=7.6e+02 Score=27.22 Aligned_cols=106 Identities=18% Similarity=0.121 Sum_probs=64.2
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEec-C
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPL-Y 169 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl-~ 169 (698)
++.++++.. ..|.+|. ...+|++.+...+......+. .+..++|++..+++-+..+-...+..+..|+..+.+ .
T Consensus 162 ~~~~a~i~~--TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~ 238 (528)
T PRK07470 162 HDDPCWFFF--TSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPS 238 (528)
T ss_pred CCCeEEEEe--CCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecc
Confidence 455665543 3454443 345788777543332211111 256778888887776544333333334455554443 4
Q ss_pred CCCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 170 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
...+++.+...+++.++.+++..+.....+..
T Consensus 239 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 270 (528)
T PRK07470 239 ERFDPAEVWALVERHRVTNLFTVPTILKMLVE 270 (528)
T ss_pred cCcCHHHHHHHHHhcCCeEEechHHHHHHHHh
Confidence 46788999999999999999998887766543
No 208
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=30.77 E-value=7.5e+02 Score=27.40 Aligned_cols=117 Identities=14% Similarity=0.036 Sum_probs=73.4
Q ss_pred CCCCCceEEEeecCCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--e~~~~~lA~~~~G~~~vp 167 (698)
.++.+|++.- ..|.++.. ..+|++.+...+.... ...+++.++++...++-.. .++..++..+..|...+.
T Consensus 193 ~~~~~a~i~~--TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~ 267 (538)
T TIGR03208 193 SPDDVTQLIY--TSGTTGEPKGVMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVL 267 (538)
T ss_pred CCCCeEEEEE--CCCCCCCCcEEEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEe
Confidence 4566665443 25555543 3567776655544333 3446788888888877553 345556777778887654
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHhhh----hcCCceeEEEE
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI----SEIPSVHLIVV 214 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~----~~~~~~~~ii~ 214 (698)
.+.+.++.+...+++.++.++.........+.... ..++.++.++.
T Consensus 268 -~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 317 (538)
T TIGR03208 268 -QDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLC 317 (538)
T ss_pred -cCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEE
Confidence 45678889999999999999887766655443322 12345555444
No 209
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.76 E-value=7.8e+02 Score=27.61 Aligned_cols=105 Identities=10% Similarity=-0.092 Sum_probs=67.5
Q ss_pred CCCCceEEEeecCCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhH-HHHHHHHHhcCCeEEecC
Q 005406 93 PDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEW-LIVDHACSAYSYISVPLY 169 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~-~~~~lA~~~~G~~~vpl~ 169 (698)
|+.++++.- ..|.+|.. ..+|++.+...+..+. .....++.+++++...++-.-.+ ....++.+..|+..+...
T Consensus 180 ~~~~a~i~~--TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~ 256 (576)
T PRK05620 180 ETTAAAICY--STGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPG 256 (576)
T ss_pred ccceeEEEE--CCCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecC
Confidence 455555443 24544432 3567777754433322 12235788899888777654332 234567777888877666
Q ss_pred CCCCHHHHHHHHhhccceEEEecccchHHHH
Q 005406 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLL 200 (698)
Q Consensus 170 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 200 (698)
+...++.+...+++.++.+++..+.....+.
T Consensus 257 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 287 (576)
T PRK05620 257 PDLSAPTLAKIIATAMPRVAHGVPTLWIQLM 287 (576)
T ss_pred CCCCHHHHHHHHHHhcCceeeecCHHHHHHH
Confidence 6778899999999999999998776655443
No 210
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=30.54 E-value=6.2e+02 Score=27.76 Aligned_cols=105 Identities=14% Similarity=0.087 Sum_probs=73.4
Q ss_pred hCCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcC--CCHhHHHHHHHHHhcCCeEE
Q 005406 91 NYPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLI--NRPEWLIVDHACSAYSYISV 166 (698)
Q Consensus 91 ~~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~--n~~e~~~~~lA~~~~G~~~v 166 (698)
..||..+.+.- ..|..|. ...+|--.+...+..++..+ |+...+++++-.| .+.-.++..+|++..|++.|
T Consensus 231 ~~pdd~~niQF--TSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~V 305 (596)
T KOG1177|consen 231 LSPDDAVNIQF--TSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIV 305 (596)
T ss_pred cCCCCceEEEe--ccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEE
Confidence 35666655443 2454443 34678778888777776643 5655444444332 23456778899999999999
Q ss_pred ecCCCCCHHHHHHHHhhccceEEEecccchHHHH
Q 005406 167 PLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLL 200 (698)
Q Consensus 167 pl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 200 (698)
.-.|.+.+..+...+.+-++..++..+...-.+.
T Consensus 306 fp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dll 339 (596)
T KOG1177|consen 306 FPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLL 339 (596)
T ss_pred eeCCCCChHHHHHHHHhhceEEEecChHHHHHHh
Confidence 9899999999999999999999999877654444
No 211
>PRK06164 acyl-CoA synthetase; Validated
Probab=30.15 E-value=4.7e+02 Score=28.99 Aligned_cols=102 Identities=15% Similarity=0.043 Sum_probs=70.2
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC-HhHHHHHHHHHhcCCeEEecC
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINR-PEWLIVDHACSAYSYISVPLY 169 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~-~e~~~~~lA~~~~G~~~vpl~ 169 (698)
++.+++... ..|..+. ...+|...+...+..++..+ ++.+++++...++-+ .-.+..+++++..|+.++..
T Consensus 180 ~~~~~~i~~--TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~- 253 (540)
T PRK06164 180 PDAGALLFT--TSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE- 253 (540)
T ss_pred CCceEEEEE--CCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-
Confidence 466666553 2454443 34578888876665555544 678899888877754 22334677888888887765
Q ss_pred CCCCHHHHHHHHhhccceEEEecccchHHHH
Q 005406 170 DTLGPDAVKYVVNHAEIEAIFCIPQTLNTLL 200 (698)
Q Consensus 170 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 200 (698)
+......+...+++.++.+++..+.....+.
T Consensus 254 ~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~ 284 (540)
T PRK06164 254 PVFDAARTARALRRHRVTHTFGNDEMLRRIL 284 (540)
T ss_pred CCCCHHHHHHHHHHhCCeeecCCHHHHHHHH
Confidence 4567888999999999999998876655544
No 212
>PRK07529 AMP-binding domain protein; Validated
Probab=29.84 E-value=3.1e+02 Score=31.48 Aligned_cols=95 Identities=12% Similarity=0.069 Sum_probs=63.4
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|.+.+..+.. ..++..+|.+.+...+..+.. ..++.++|++...+|-...+ ....++++..|. ++.+.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeCCC
Confidence 567777766543321 123567899888766555443 36788999999999866433 333555666674 33333
Q ss_pred -CChhhHHHHHhhhcCcEEeech
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVP 351 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P 351 (698)
..+..+...++..++.+++...
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEeC
Confidence 5788899999999999988753
No 213
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=29.74 E-value=8e+02 Score=27.10 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=74.2
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHH---HHHHHHhcCCeEE
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLI---VDHACSAYSYISV 166 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~---~~lA~~~~G~~~v 166 (698)
.++.+|++.- ..|.++. ...+|...+...+.... ...++.+++++...+|-...+-. ..++++..|++.+
T Consensus 181 ~~~~~a~i~~--TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v 255 (527)
T TIGR02275 181 KSDEVAFFQL--SGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVV 255 (527)
T ss_pred CCCccEEEEe--CCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEE
Confidence 4566666543 2454443 34578887766554433 34567889988877775543322 3677788898876
Q ss_pred ecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhh----cCCceeEEEE
Q 005406 167 PLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS----EIPSVHLIVV 214 (698)
Q Consensus 167 pl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~ii~ 214 (698)
.. +...+..+...+++.++.+++..+.....+..... .++.++.++.
T Consensus 256 ~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~ 306 (527)
T TIGR02275 256 LA-PDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQV 306 (527)
T ss_pred EC-CCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEE
Confidence 54 44567788889999999999998877655443321 2345555443
No 214
>PRK09088 acyl-CoA synthetase; Validated
Probab=29.56 E-value=3.7e+02 Score=29.36 Aligned_cols=92 Identities=12% Similarity=0.012 Sum_probs=64.6
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++++....| ..+|...+...+..+.. ..++.++|++..++|-...+ +...+.++..|+..+..+
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCc
Confidence 4666766543333 35888888666554433 35678899999888876543 334677888898888776
Q ss_pred -CChhhHHHHHhhhcCcEEeechHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~ 353 (698)
.....+...++..+++.++.....
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~~~ 104 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDDAV 104 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcchh
Confidence 477888889999999998876543
No 215
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=29.09 E-value=7.8e+02 Score=26.81 Aligned_cols=102 Identities=10% Similarity=-0.061 Sum_probs=67.8
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH-hHHHHHHHHHhcCCeEEecC
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP-EWLIVDHACSAYSYISVPLY 169 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~-e~~~~~lA~~~~G~~~vpl~ 169 (698)
++..+++.. ..|.++. ...+|++.+...+..+.. ..++..++++....+-.. ..+..+++++..|++.+...
T Consensus 140 ~~~~~~il~--TSGTTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~ 214 (502)
T TIGR01734 140 GDDNYYIIY--TSGSTGNPKGVQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLD 214 (502)
T ss_pred CCCeEEEEE--CCCCCCCCCEEEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcC
Confidence 444555443 2455444 346788888765554433 357777887776665543 23456778899999998876
Q ss_pred CC--CCHHHHHHHHhhccceEEEecccchHHH
Q 005406 170 DT--LGPDAVKYVVNHAEIEAIFCIPQTLNTL 199 (698)
Q Consensus 170 ~~--~~~~~l~~il~~~~~~~v~~~~~~~~~~ 199 (698)
+. ..+..+...+...++..+...+.....+
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~ 246 (502)
T TIGR01734 215 KDITNNFKLLFEELPKTGLNVWVSTPSFVDMC 246 (502)
T ss_pred HHHhcCHHHHHHHHHHcCCeEEEEChhHHHHH
Confidence 54 3567888889999999988887665443
No 216
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=28.95 E-value=4.5e+02 Score=29.35 Aligned_cols=91 Identities=15% Similarity=0.094 Sum_probs=66.1
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++.+...-+. .+|++.+...+..+... .++.++|++...+|-+.-+ +...+.++..|+..+...
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~-~~~~~a~~~~Gav~vpln~ 95 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEF-LIAFLAALRAGAVAVPLNP 95 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeecCc
Confidence 45667766554333 88999887776665544 3477899999888876433 344667788999988877
Q ss_pred -CChhhHHHHHhhhcCcEEeechH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPR 352 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~ 352 (698)
.....+...++..++..++....
T Consensus 96 ~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 96 RLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 36788888888889999888876
No 217
>PRK08162 acyl-CoA synthetase; Validated
Probab=28.68 E-value=4e+02 Score=29.62 Aligned_cols=83 Identities=8% Similarity=-0.063 Sum_probs=62.7
Q ss_pred eechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEee
Q 005406 275 VLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPS 349 (698)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~ 349 (698)
.+|...+...+..+... .++.++|++...+|-...+ ....+.++..|+..+..+ .....+...++..+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM-VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 58998887766555543 5788999999988876532 334667788888887766 47788999999999999998
Q ss_pred chHHHHHHH
Q 005406 350 VPRLYNRIY 358 (698)
Q Consensus 350 ~P~~~~~l~ 358 (698)
.+.....+.
T Consensus 122 ~~~~~~~~~ 130 (545)
T PRK08162 122 DTEFAEVAR 130 (545)
T ss_pred ccchhhHHH
Confidence 887665543
No 218
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=28.38 E-value=7.4e+02 Score=27.48 Aligned_cols=103 Identities=10% Similarity=-0.034 Sum_probs=69.4
Q ss_pred CCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHH---HHHHHHHhcCCeEEe
Q 005406 93 PDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWL---IVDHACSAYSYISVP 167 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~---~~~lA~~~~G~~~vp 167 (698)
++.+|++.- ..|.++. ...+|.+.+...+..... ..++.+++++...+|-.-.+- ...++++..|+.++.
T Consensus 181 ~~~~a~i~~--TSGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~ 255 (536)
T PRK10946 181 ADEVAFFQL--SGGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVL 255 (536)
T ss_pred CCCeEEEEe--CCCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEE
Confidence 455555432 2455443 346788888776665443 457888998888776543322 246788889998876
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
.. ...+.....++++.++.++...+.....+..
T Consensus 256 ~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 256 AP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred CC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 54 4566778888999999999988876665544
No 219
>PLN02614 long-chain acyl-CoA synthetase
Probab=27.62 E-value=6.4e+02 Score=29.13 Aligned_cols=102 Identities=9% Similarity=-0.104 Sum_probs=68.0
Q ss_pred CCCCeEEEEec--CCCCCCcceeeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEe
Q 005406 254 KPEDIATICYT--SGTTGTPKGAVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY 328 (698)
Q Consensus 254 ~~~~~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~ 328 (698)
.|+.+|++.-. .|..|. -..+|.+.+...+..+.. ..++.++|++..++|-..-+ ....++++..|+..+..
T Consensus 58 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl 134 (666)
T PLN02614 58 YPNNPMLGRREIVDGKPGK--YVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPL 134 (666)
T ss_pred CCCCCeEEEecccCCCCCC--cEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEe
Confidence 45667655321 121221 234688887666554443 36789999999988866432 33366778889888766
Q ss_pred C--CChhhHHHHHhhhcCcEEeechHHHHHHH
Q 005406 329 Q--GDNLKLMDDLAVLKPTIFPSVPRLYNRIY 358 (698)
Q Consensus 329 ~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~ 358 (698)
. .....+...++..++.+++.....+..+.
T Consensus 135 ~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~ 166 (666)
T PLN02614 135 YDTLGAGAVEFIISHSEVSIVFVEEKKISELF 166 (666)
T ss_pred cCCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 5 57888999999999999998776554443
No 220
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=27.50 E-value=7.4e+02 Score=30.69 Aligned_cols=105 Identities=13% Similarity=-0.016 Sum_probs=70.8
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--HhHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINR--PEWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~--~e~~~~~lA~~~~G~~~vp 167 (698)
.+|.+|++.- ..|.++. ...+|.+.+...+..+.. ..++.++|++...+|-. ..+....++.+..|+..+.
T Consensus 780 ~~~~~a~i~~--TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~ 854 (1146)
T PRK08633 780 KPDDTATIIF--SSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVY 854 (1146)
T ss_pred CCCCEEEEEE--CCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEE
Confidence 3566666543 2454443 345788877766555443 34678888876665532 2333446777888988887
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHh
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLS 201 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~ 201 (698)
......++.+...+++.++.++...+.....+.+
T Consensus 855 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 888 (1146)
T PRK08633 855 HPDPTDALGIAKLVAKHRATILLGTPTFLRLYLR 888 (1146)
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHh
Confidence 7666788899999999999999998877665543
No 221
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.30 E-value=3.3e+02 Score=29.87 Aligned_cols=82 Identities=10% Similarity=-0.009 Sum_probs=60.2
Q ss_pred eechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEee
Q 005406 275 VLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPS 349 (698)
Q Consensus 275 ~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~ 349 (698)
.+|...+...+..... ..++.++|++..+.+-...+ ....+.++..|+..+..+ .....+...++..+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEF-FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH-HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 4777777555544433 35788999999988876433 445778888999888776 46778888999999999988
Q ss_pred chHHHHHH
Q 005406 350 VPRLYNRI 357 (698)
Q Consensus 350 ~P~~~~~l 357 (698)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 87766544
No 222
>PRK11761 cysM cysteine synthase B; Provisional
Probab=27.17 E-value=4.3e+02 Score=26.96 Aligned_cols=70 Identities=7% Similarity=-0.057 Sum_probs=49.0
Q ss_pred HHHHHHHHHhCC-CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecc
Q 005406 123 RKEIGSGLLFHG-LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIP 193 (698)
Q Consensus 123 ~~~la~~L~~~g-v~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~ 193 (698)
+..+...+.+.| +.+|+.|.. ...+-.-..+-++|...|..+..+-|...+......++..++++++++.
T Consensus 47 a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 47 ALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 333334444555 467776544 4555566667778888999877776666566777888999999999986
No 223
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=26.98 E-value=4.9e+02 Score=25.78 Aligned_cols=61 Identities=13% Similarity=-0.002 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCCHh
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLL-FHGLQKGVRIGLYLINRPE 150 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~n~~e 150 (698)
.+++...+..|+...+.+. |...-+|-..|-.++.+.+.+.+..|. +.|++ ..++.-|+..
T Consensus 12 tv~~~l~~~~p~~~~iy~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~~g~d----~ivIaCNTA~ 73 (251)
T TIGR00067 12 SVLKEIRKQLPKEHYIYVG---DTKRFPYGEKSPEFILEYVLELLTFLKERHNIK----LLVVACNTAS 73 (251)
T ss_pred HHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCC----EEEEeCchHH
Confidence 4567778889999888776 666677888899999999999999999 88773 4455557665
No 224
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=26.84 E-value=5.5e+02 Score=27.16 Aligned_cols=62 Identities=6% Similarity=-0.008 Sum_probs=47.1
Q ss_pred hCC-CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecc
Q 005406 132 FHG-LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIP 193 (698)
Q Consensus 132 ~~g-v~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~ 193 (698)
+.| ++||....|....+---+.+-++|...|..+..+-|...+..-...++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 444 67785444446667777777788899999888777766666778899999999999974
No 225
>PRK13390 acyl-CoA synthetase; Provisional
Probab=26.30 E-value=4.5e+02 Score=28.79 Aligned_cols=92 Identities=11% Similarity=0.017 Sum_probs=64.5
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++++... +| -.+|...+...+..+... .++.++|++..+++-+..+ +...+.++..|+..+..+
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~-~~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA-LVVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEecccc
Confidence 46677765422 22 358998887666555443 5788999999888776533 344677888898887766
Q ss_pred -CChhhHHHHHhhhcCcEEeechHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRL 353 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~ 353 (698)
..+..+...++..++..+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~~ 106 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAAL 106 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcchh
Confidence 467788888888999888776543
No 226
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=26.30 E-value=5.9e+02 Score=25.57 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=61.0
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcC
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYS 162 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G 162 (698)
.+++...++-|+.-.+... |....+|-..|=.++.+++.++...|.+.+++ +.|+.-|+.-.++...-=-+..
T Consensus 19 sVlrei~~~LP~e~~iY~~---D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~ik----~lVIACNTASa~al~~LR~~~~ 91 (269)
T COG0796 19 SVLREIRRQLPDEDIIYVG---DTARFPYGEKSEEEIRERTLEIVDFLLERGIK----ALVIACNTASAVALEDLREKFD 91 (269)
T ss_pred HHHHHHHHHCCCCcEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCC----EEEEecchHHHHHHHHHHHhCC
Confidence 4567778889999888776 66666777789999999999999999998864 6667778776666555545555
Q ss_pred CeEEecCCC
Q 005406 163 YISVPLYDT 171 (698)
Q Consensus 163 ~~~vpl~~~ 171 (698)
..++-+-|.
T Consensus 92 iPVvGviPa 100 (269)
T COG0796 92 IPVVGVIPA 100 (269)
T ss_pred CCEEEeccc
Confidence 555544444
No 227
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=25.98 E-value=7.4e+02 Score=31.28 Aligned_cols=120 Identities=9% Similarity=-0.087 Sum_probs=78.3
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHhHH-HHHHHHHhcCCeEEec
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPEWL-IVDHACSAYSYISVPL 168 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e~~-~~~lA~~~~G~~~vpl 168 (698)
.|+.+|++.- ..|.+|. ...+|.+.+...+.. .....++.+++++...++-+.+.- .-+++.+..|+..+..
T Consensus 596 ~~~~~a~i~~--TSGSTG~PKgV~~~h~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 670 (1296)
T PRK10252 596 QPHHTAYIIF--TSGSTGRPKGVMVGQTAIVNRLLW---MQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMA 670 (1296)
T ss_pred CCCCeEEEEE--CCCCCCCCCEEEeccHHHHHHHHH---HHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEEC
Confidence 4566666543 3555443 345677776554433 333458889999998887765443 3467778889988876
Q ss_pred CC--CCCHHHHHHHHhhccceEEEecccchHHHHhhhh------cCCceeEEEEeC
Q 005406 169 YD--TLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS------EIPSVHLIVVVG 216 (698)
Q Consensus 169 ~~--~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~~ii~~~ 216 (698)
.+ ...++.+...+++.++.++...+.....+..... .++.++.+++-+
T Consensus 671 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gG 726 (1296)
T PRK10252 671 EPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSG 726 (1296)
T ss_pred ChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEec
Confidence 54 4577889999999999999888776655443311 235566665544
No 228
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=25.88 E-value=4.7e+02 Score=23.16 Aligned_cols=44 Identities=9% Similarity=-0.080 Sum_probs=33.7
Q ss_pred hhHHHHHHHH-HHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeec
Q 005406 307 AHIYERANQI-VSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSV 350 (698)
Q Consensus 307 ~h~~~~~~~~-~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~ 350 (698)
.|..|..... ..-..|..+++.. -.+..+.+.+.+++|+++...
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS 61 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVS 61 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEc
Confidence 5888877643 3346788888876 467999999999999987654
No 229
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=25.84 E-value=4.8e+02 Score=26.50 Aligned_cols=65 Identities=11% Similarity=0.025 Sum_probs=45.4
Q ss_pred HHHhCC-CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEeccc
Q 005406 129 GLLFHG-LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ 194 (698)
Q Consensus 129 ~L~~~g-v~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~ 194 (698)
...+.| +.+|++| +....+-.-..+-++|.++|..+..+-|...++.....++..++++++++..
T Consensus 47 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 47 DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 344455 4777776 4444555555666677789998777766655555678889999999999865
No 230
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=25.66 E-value=3.4e+02 Score=30.27 Aligned_cols=88 Identities=17% Similarity=0.053 Sum_probs=61.8
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++++. . +| ..+|.+.+...+..+... .++.++|++..++|-.- -.....++++..|+..+..+
T Consensus 36 ~pd~~a~~~-~---~~----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 36 MPDKIAVVD-N---HG----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred CCCceEEEc-C---CC----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccch
Confidence 466777553 2 22 357888886665544433 67889999998887653 22344678889999887766
Q ss_pred -CChhhHHHHHhhhcCcEEeec
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSV 350 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~ 350 (698)
.....+...++..++.+++..
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEe
Confidence 567788888999999888764
No 231
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=25.60 E-value=4.6e+02 Score=29.33 Aligned_cols=92 Identities=14% Similarity=0.071 Sum_probs=65.1
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++++.. +..+|+..+...+..+... .++.++|++...++-...+ ....+.++..|+..+..+
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~ 105 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNP 105 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCc
Confidence 3566666542 2468999887666555443 5788999998887765433 334577888999888766
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYN 355 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~ 355 (698)
.....+...++..+++.++.......
T Consensus 106 ~~~~~~~~~~~~~~~~~~vi~~~~~~~ 132 (557)
T PRK07059 106 LYTPRELEHQLKDSGAEAIVVLENFAT 132 (557)
T ss_pred ccCHHHHHHHHHccCceEEEEchhhHH
Confidence 46788889999999999887665443
No 232
>PLN02574 4-coumarate--CoA ligase-like
Probab=25.40 E-value=4.9e+02 Score=29.16 Aligned_cols=96 Identities=14% Similarity=0.092 Sum_probs=66.1
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc---c-cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL---M-VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~-~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (698)
.++.++++. +.+| ..+|.+.+...+..+.. . .++.++|++..+++-... .....+.++..|+..+..+
T Consensus 52 ~~~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALID---SSTG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVY-FPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEE---CCCC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcch-HHHHHHHHHHhCeEEeCcC
Confidence 456677664 2222 24688877555544333 3 578899999999886532 2344677888998888766
Q ss_pred --CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 --GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 --~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...+...++..++..+.....+
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 4677888899999999988887765554
No 233
>PRK00865 glutamate racemase; Provisional
Probab=25.33 E-value=5e+02 Score=25.91 Aligned_cols=61 Identities=18% Similarity=0.039 Sum_probs=47.7
Q ss_pred HHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCHh
Q 005406 83 DNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRPE 150 (698)
Q Consensus 83 ~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~e 150 (698)
.+++...+..|+...+... |....+|-..|-.|+.+++.+++..|.+.|+. ..++.-|+..
T Consensus 19 tvl~~i~~~lp~~~~iY~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~d----~iVIaCNTa~ 79 (261)
T PRK00865 19 TVLREIRRLLPDEHIIYVG---DTARFPYGEKSEEEIRERTLEIVEFLLEYGVK----MLVIACNTAS 79 (261)
T ss_pred HHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCC----EEEEeCchHH
Confidence 4567777889999888777 66667788899999999999999999987653 4455556654
No 234
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=25.26 E-value=3.2e+02 Score=34.84 Aligned_cols=97 Identities=12% Similarity=0.037 Sum_probs=66.4
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.+|++...+...+......+|++.+...+..+... .++.+++++..++|-...+ ....++++..|+..+.++
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 57788876543221111124568999887776655543 5788999999988876433 444678889999888776
Q ss_pred -CChhhHHHHHhhhcCcEEeech
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVP 351 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P 351 (698)
..+..+...++..++..++...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 4567778888888988877643
No 235
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=25.07 E-value=6.9e+02 Score=28.37 Aligned_cols=101 Identities=15% Similarity=0.091 Sum_probs=66.9
Q ss_pred CCCCeEEEEec--CCCCCCcceeeechHHHHHHHHhccccc--ccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEe-
Q 005406 254 KPEDIATICYT--SGTTGTPKGAVLTHGNLISNVAGFSLMV--QFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY- 328 (698)
Q Consensus 254 ~~~~~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~- 328 (698)
.++.++++... .+++|. ...+|...+...+..+...+ .+.++|++..++|-...+ +...++++..|+..+.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl~ 123 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPLF 123 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhH-HHHHHHHHHcCceeEecC
Confidence 35677765432 112332 34678888766655444332 268899999998877432 33466788888887755
Q ss_pred CC----ChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 329 QG----DNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 329 ~~----~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
+. ....+...++..++.+++..+..+..+
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 32 267888999999999999887766554
No 236
>PRK05850 acyl-CoA synthetase; Validated
Probab=25.05 E-value=6.5e+02 Score=28.26 Aligned_cols=102 Identities=12% Similarity=0.084 Sum_probs=67.9
Q ss_pred CCCCeEEEEec-CCC-CCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEe
Q 005406 254 KPEDIATICYT-SGT-TGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFY 328 (698)
Q Consensus 254 ~~~~~a~i~~T-SGT-TG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~ 328 (698)
.|+.++++... ++. .|. ...+|+..+...+..+... .+ .++|++..+++-.. -.....++++..|+..+..
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEec
Confidence 46677765432 111 122 3568888886655544433 34 47899988888653 2234467788899988877
Q ss_pred CC-----ChhhHHHHHhhhcCcEEeechHHHHHHHH
Q 005406 329 QG-----DNLKLMDDLAVLKPTIFPSVPRLYNRIYA 359 (698)
Q Consensus 329 ~~-----~~~~l~~~i~~~~~t~~~~~P~~~~~l~~ 359 (698)
+. ....+...++..++.+++..+.....+..
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 125 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTE 125 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHH
Confidence 52 45678889999999999998877665543
No 237
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=24.83 E-value=4.4e+02 Score=29.42 Aligned_cols=94 Identities=14% Similarity=0.090 Sum_probs=66.0
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhccc----ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSL----MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~ 329 (698)
.++.++++.. | -.+|+..+...+..+.. ..++.++|++..++|-...+ ....++++..|+..+..+
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEeccC
Confidence 3567776532 1 24788888666555443 35788999999888766432 334677888899988765
Q ss_pred --CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 --GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 --~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...+++.+++.++........+
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 137 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTTV 137 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHHH
Confidence 4678888899999999988876655443
No 238
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.72 E-value=4.3e+02 Score=27.30 Aligned_cols=74 Identities=9% Similarity=0.079 Sum_probs=54.9
Q ss_pred HHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhhc
Q 005406 129 GLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFISE 205 (698)
Q Consensus 129 ~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~ 205 (698)
.|.+.|+.||.+|+|..--+.-.+...+|..+ |.-++.++... ..-+..+++.++...+...+..+...++...
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~ 246 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKT 246 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHh
Confidence 46777999999999999999999999998764 67667776553 2345678888999988776555554444433
No 239
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=24.34 E-value=2.2e+02 Score=23.30 Aligned_cols=52 Identities=12% Similarity=0.067 Sum_probs=36.9
Q ss_pred EEeHHHHHHH----HHHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCe
Q 005406 113 WMTYGEVSAA----RKEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYI 164 (698)
Q Consensus 113 ~~Ty~el~~~----~~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~ 164 (698)
.+.+.++... ...+...+...++.+++.|.+++.++.....+...+...|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 3556555432 235666677778878889999999988776777777788874
No 240
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=23.95 E-value=6.2e+02 Score=23.93 Aligned_cols=112 Identities=13% Similarity=0.035 Sum_probs=0.0
Q ss_pred hHHHHHHHHhccccc-ccCCCcEEEEcCCh--hhHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeech
Q 005406 278 HGNLISNVAGFSLMV-QFYPSDIYMSYLPL--AHIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVP 351 (698)
Q Consensus 278 h~~l~~~~~~~~~~~-~~~~~d~~l~~~pl--~h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P 351 (698)
.+..+..+......- .....-+++...+- .|..|... ....-..|-.+++.. -.+..+.+.+++.+|+++...-
T Consensus 64 ~~~~l~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~ 143 (197)
T TIGR02370 64 MLAGIKVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSA 143 (197)
T ss_pred HHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Q ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHcCCCCchhhHHHHHHHHHHHcCCc-EE---EEEecCCCCCHHH
Q 005406 352 RLYNRIYAGITNAVKASGTLREKLFTAAYNSKKQAIVSGQTPSKMWDRLVFNKIRERLGGR-VR---FMGSGASPLSPDV 427 (698)
Q Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~~~d~~~~~~~~~~~g~~-lr---~i~~gG~~l~~~~ 427 (698)
.+-..+.. +.++.+.+-.. ++ .++.||.++.++.
T Consensus 144 ~~~~~~~~------------------------------------------~~~~i~~l~~~~~~~~v~i~vGG~~~~~~~ 181 (197)
T TIGR02370 144 LMTTTMYG------------------------------------------QKDINDKLKEEGYRDSVKFMVGGAPVTQDW 181 (197)
T ss_pred ccccCHHH------------------------------------------HHHHHHHHHHcCCCCCCEEEEEChhcCHHH
Q ss_pred HHHH
Q 005406 428 MDFL 431 (698)
Q Consensus 428 ~~~~ 431 (698)
.+.+
T Consensus 182 ~~~~ 185 (197)
T TIGR02370 182 ADKI 185 (197)
T ss_pred HHHh
No 241
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=23.95 E-value=32 Score=25.62 Aligned_cols=18 Identities=44% Similarity=0.973 Sum_probs=12.2
Q ss_pred cccccCChhhhcccccCCCceecCc
Q 005406 504 FQGYYKNEVQTREVIDGDGWLHTGD 528 (698)
Q Consensus 504 ~~GY~~~~~~t~~~f~~~gw~~TGD 528 (698)
|-|||.... +.-||.|||
T Consensus 62 fyg~yaedn-------gkhwydtgd 79 (80)
T PF05452_consen 62 FYGHYAEDN-------GKHWYDTGD 79 (80)
T ss_pred eeeeeeccC-------CcccccCCC
Confidence 567775422 445999998
No 242
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=23.83 E-value=5.7e+02 Score=24.64 Aligned_cols=82 Identities=15% Similarity=0.040 Sum_probs=0.0
Q ss_pred hHHHHHH-HHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEeechHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Q 005406 308 HIYERAN-QIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPSVPRLYNRIYAGITNAVKASGTLREKLFTAAYNSKK 384 (698)
Q Consensus 308 h~~~~~~-~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~k~ 384 (698)
|..|... ....-..|-.+++.. -.+..+.+.+.+.+|+++...-.+-..+..
T Consensus 101 HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~------------------------- 155 (213)
T cd02069 101 HDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDE------------------------- 155 (213)
T ss_pred hHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHH-------------------------
Q ss_pred HHHHcCCCCchhhHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHH
Q 005406 385 QAIVSGQTPSKMWDRLVFNKIRERLGGRVRFMGSGASPLSPDVMD 429 (698)
Q Consensus 385 ~~~~~~~~~~~~~d~~~~~~~~~~~g~~lr~i~~gG~~l~~~~~~ 429 (698)
-+-....+++. +.+++ ++.||.+++.+..+
T Consensus 156 -------------~~~~i~~L~~~-~~~~~-i~vGG~~~~~~~~~ 185 (213)
T cd02069 156 -------------MVEVAEEMNRR-GIKIP-LLIGGAATSRKHTA 185 (213)
T ss_pred -------------HHHHHHHHHhc-CCCCe-EEEEChhcCHHHHh
No 243
>PLN02479 acetate-CoA ligase
Probab=23.80 E-value=6.3e+02 Score=28.34 Aligned_cols=94 Identities=10% Similarity=0.031 Sum_probs=66.6
Q ss_pred CCCCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC-
Q 005406 254 KPEDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ- 329 (698)
Q Consensus 254 ~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~- 329 (698)
.|+.++++. +. ..+|...+...+..+... .++.++|++..++|-.-. .....++++..|+..+..+
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~~ 102 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPA-MYEAHFGVPMAGAVVNCVNI 102 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHH-HHHHHHHHHhCCcEEEEecc
Confidence 466677653 21 247888776666555443 578999999998886532 2334667888898887776
Q ss_pred -CChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 330 -GDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 330 -~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.....+...++..++..++..+..+...
T Consensus 103 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 131 (567)
T PLN02479 103 RLNAPTIAFLLEHSKSEVVMVDQEFFTLA 131 (567)
T ss_pred ccCHHHHHHHHhhcCceEEEEchhhhhHH
Confidence 5778899999999999999887665443
No 244
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=23.67 E-value=3.8e+02 Score=30.03 Aligned_cols=81 Identities=11% Similarity=0.041 Sum_probs=58.4
Q ss_pred eeechHHHHHHHHhcccc----cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEE
Q 005406 274 AVLTHGNLISNVAGFSLM----VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIF 347 (698)
Q Consensus 274 V~~th~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~ 347 (698)
..+|...+...+..+... .++.++|++..++|-... .....+.++..|+..+... .....+...++..++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e-~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQ-YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 467888887666555443 367899999988776643 2334667788888887665 477889999999999998
Q ss_pred eechHHHH
Q 005406 348 PSVPRLYN 355 (698)
Q Consensus 348 ~~~P~~~~ 355 (698)
+..+....
T Consensus 127 i~~~~~~~ 134 (562)
T PRK12492 127 VYLNMFGK 134 (562)
T ss_pred Eeccccch
Confidence 87665433
No 245
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=23.50 E-value=3.1e+02 Score=29.12 Aligned_cols=62 Identities=15% Similarity=0.194 Sum_probs=40.3
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHhhccceEEE
Q 005406 125 EIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIF 190 (698)
Q Consensus 125 ~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~il~~~~~~~v~ 190 (698)
.+...|...++++||.|.+-.+ .|.....++...|+.++.++.. ...+.++..+.. +.++|+
T Consensus 60 al~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3444555667889998776443 4555556677889888776532 466778877753 556665
No 246
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=23.41 E-value=4.7e+02 Score=30.23 Aligned_cols=84 Identities=10% Similarity=-0.118 Sum_probs=61.6
Q ss_pred eeechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEe
Q 005406 274 AVLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (698)
Q Consensus 274 V~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~ 348 (698)
..+|.+.+...+..+... .++.++|++..+++-..-+ ....++++..|+..+.+. .....+...++..++.+++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 457888887666555443 5789999999998866432 334667888898887665 5778899999999999998
Q ss_pred echHHHHHHH
Q 005406 349 SVPRLYNRIY 358 (698)
Q Consensus 349 ~~P~~~~~l~ 358 (698)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8766555443
No 247
>PRK06060 acyl-CoA synthetase; Validated
Probab=23.08 E-value=7.9e+02 Score=28.55 Aligned_cols=120 Identities=12% Similarity=-0.049 Sum_probs=73.9
Q ss_pred CCCCceEEEeecCCccCCc--eEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCCH--hHHHHHHHHHhcCCeEEec
Q 005406 93 PDYKYLGTRVRVDGTVGGY--KWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINRP--EWLIVDHACSAYSYISVPL 168 (698)
Q Consensus 93 pd~~al~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--e~~~~~lA~~~~G~~~vpl 168 (698)
++.+|++.- ..|.+|.. ..+|.+.+...+..+.. ...++.+++++....+-.. .+...++..+..|+.++..
T Consensus 144 ~~~~a~il~--TSGSTG~PKgV~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~ 219 (705)
T PRK06060 144 GDALAYATY--TSGTTGPPKAAIHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVIN 219 (705)
T ss_pred CCCeEEEEE--CCCCCCCCcEEEEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEe
Confidence 355555443 35555542 35677777655544322 2346778887765554332 2233456677888888877
Q ss_pred CCCCCHHHHHHHHhhccceEEEecccchHHHHhhh--hcCCceeEEEEeC
Q 005406 169 YDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFI--SEIPSVHLIVVVG 216 (698)
Q Consensus 169 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~ii~~~ 216 (698)
.....++.+..++++.++.++++.+.....+.... ..++.++.++.-+
T Consensus 220 ~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~slr~i~~gG 269 (705)
T PRK06060 220 SAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPDSFRSLRCVVSAG 269 (705)
T ss_pred CCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccccccceeEEEEec
Confidence 66677888888999999999998877665554422 1345566665543
No 248
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=23.04 E-value=5.7e+02 Score=25.97 Aligned_cols=66 Identities=12% Similarity=0.013 Sum_probs=46.5
Q ss_pred HHHHhCCC-CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEeccc
Q 005406 128 SGLLFHGL-QKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ 194 (698)
Q Consensus 128 ~~L~~~gv-~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~ 194 (698)
..+.+.|. .+|+.|. ....+-.-..+-++|...|..++.+-|...+..-...++..++++++++..
T Consensus 47 ~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 47 EDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 33444553 6777664 455555666666778889998877777665566677899999999998764
No 249
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=22.97 E-value=8e+02 Score=25.62 Aligned_cols=54 Identities=13% Similarity=-0.025 Sum_probs=29.8
Q ss_pred CCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecC--C--CCCHHHHHHHHhhccceEEEec
Q 005406 136 QKGVRIGLYLINRPEWLIVDHACSAYSYISVPLY--D--TLGPDAVKYVVNHAEIEAIFCI 192 (698)
Q Consensus 136 ~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~--~--~~~~~~l~~il~~~~~~~v~~~ 192 (698)
++||.|.+..|.=..+ ..++...|..++++. . .+..+.+...++..++++++..
T Consensus 110 ~~gd~v~v~~P~y~~~---~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~ 167 (368)
T PRK03317 110 GPGRTALGFVPSYSMH---PIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLT 167 (368)
T ss_pred CCCCEEEEeCCChHHH---HHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEe
Confidence 5677777655443332 234445666666553 2 3345667766665566665543
No 250
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=22.90 E-value=6.2e+02 Score=27.21 Aligned_cols=61 Identities=20% Similarity=0.003 Sum_probs=49.9
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEec--CCCCCHHHHHHHHhhccceEEEecccc
Q 005406 135 LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPL--YDTLGPDAVKYVVNHAEIEAIFCIPQT 195 (698)
Q Consensus 135 v~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl--~~~~~~~~l~~il~~~~~~~v~~~~~~ 195 (698)
--+|-+|+++..=.++....+..+...|+-+... ||....+.+...|...++.++-.....
T Consensus 29 pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~ 91 (406)
T TIGR00936 29 PLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGET 91 (406)
T ss_pred CCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCC
Confidence 3458899999999999999999999999976655 787788899999999898876544433
No 251
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=22.88 E-value=3e+02 Score=29.92 Aligned_cols=57 Identities=11% Similarity=0.048 Sum_probs=37.9
Q ss_pred hCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCC-----CCHHHHHHHHhhccceEEEec
Q 005406 132 FHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDT-----LGPDAVKYVVNHAEIEAIFCI 192 (698)
Q Consensus 132 ~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~il~~~~~~~v~~~ 192 (698)
+.++++||.|.+-.+ .|.....++...|+.+++++.. +..+.++..+.. +.++|++.
T Consensus 105 ~~~~~pGd~VIv~~~---t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 105 DRALKPGDEVITVAA---GFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred ccCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 348899998877544 4455566777789988776532 356777777753 56666654
No 252
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=22.82 E-value=1.2e+03 Score=28.88 Aligned_cols=118 Identities=10% Similarity=-0.034 Sum_probs=74.2
Q ss_pred CCCCCceEEEeecCCccCC--ceEEeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCC--HhHHHHHHHHHhcCCeEEe
Q 005406 92 YPDYKYLGTRVRVDGTVGG--YKWMTYGEVSAARKEIGSGLLFHGLQKGVRIGLYLINR--PEWLIVDHACSAYSYISVP 167 (698)
Q Consensus 92 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~--~e~~~~~lA~~~~G~~~vp 167 (698)
.|+.+|++.- ..|.++. ..-+|.+.+...+..... ..++.++|++...+|-. ..+....+..+..|...+.
T Consensus 791 ~~~d~a~i~~--TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 865 (1140)
T PRK06814 791 DPDDPAVILF--TSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFL 865 (1140)
T ss_pred CCCCcEEEEE--CCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEE
Confidence 4566666543 3555443 235688887666655544 34678899888777653 2333556677788988876
Q ss_pred cCCCCCHHHHHHHHhhccceEEEecccchHHHHhhhh--cCCceeEEEE
Q 005406 168 LYDTLGPDAVKYVVNHAEIEAIFCIPQTLNTLLSFIS--EIPSVHLIVV 214 (698)
Q Consensus 168 l~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~--~~~~~~~ii~ 214 (698)
.......+.+...+++.++.++...+.....+..... .++.++.++.
T Consensus 866 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~ 914 (1140)
T PRK06814 866 YPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFA 914 (1140)
T ss_pred ecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEE
Confidence 6555556677788899999999887766554433211 2344554443
No 253
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=22.79 E-value=4.8e+02 Score=23.84 Aligned_cols=32 Identities=22% Similarity=0.130 Sum_probs=23.6
Q ss_pred chHHHHHHhcCcCceeEEEEEcCCCCeEEEEEE
Q 005406 558 PEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVA 590 (698)
Q Consensus 558 p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv 590 (698)
...|.+.+.+.|+|.+|.|+-.. ...+||+-.
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg-~~A~Vgv~~ 87 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITG-NYAYVGVDL 87 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEEC-CEEEEEEEc
Confidence 36788889999999999877653 555566644
No 254
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=22.73 E-value=3.6e+02 Score=28.47 Aligned_cols=65 Identities=14% Similarity=0.032 Sum_probs=42.3
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCC-----CCCHHHHHHHHhh---ccceEEEe
Q 005406 124 KEIGSGLLFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYD-----TLGPDAVKYVVNH---AEIEAIFC 191 (698)
Q Consensus 124 ~~la~~L~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~-----~~~~~~l~~il~~---~~~~~v~~ 191 (698)
..+...+...++++||.|.+-.+. +.....++...|+.++.++. .+..+.++..++. .+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 344455556678999987776544 44455667788987766543 2467888888863 35566653
No 255
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=21.54 E-value=5.1e+02 Score=30.16 Aligned_cols=85 Identities=9% Similarity=0.022 Sum_probs=62.8
Q ss_pred eeechHHHHHHHHhccc---ccccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEe
Q 005406 274 AVLTHGNLISNVAGFSL---MVQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFP 348 (698)
Q Consensus 274 V~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~ 348 (698)
..+|.+.+...+..+.. ..++.++|++..+++-..-+ +...++++..|+..+.+. ..+..+...++..++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 45788887766655444 36788999999888765432 333567788888887655 5788899999999999999
Q ss_pred echHHHHHHHH
Q 005406 349 SVPRLYNRIYA 359 (698)
Q Consensus 349 ~~P~~~~~l~~ 359 (698)
+....+..+.+
T Consensus 184 ~~~~~~~~l~~ 194 (696)
T PLN02387 184 CDSKQLKKLID 194 (696)
T ss_pred ECHHHHHHHHH
Confidence 88777766554
No 256
>PRK13383 acyl-CoA synthetase; Provisional
Probab=21.31 E-value=4.5e+02 Score=29.01 Aligned_cols=82 Identities=11% Similarity=-0.069 Sum_probs=60.1
Q ss_pred eechHHHHHHHHhcccc---cccCCCcEEEEcCChhhHHHHHHHHHHHHhCcEEEEeC--CChhhHHHHHhhhcCcEEee
Q 005406 275 VLTHGNLISNVAGFSLM---VQFYPSDIYMSYLPLAHIYERANQIVSVYYGVAVGFYQ--GDNLKLMDDLAVLKPTIFPS 349 (698)
Q Consensus 275 ~~th~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~~~~~~~~~l~~G~~~~~~~--~~~~~l~~~i~~~~~t~~~~ 349 (698)
.+|...+...+..+... .++.++|++..++|-.-. .....+.++..|+..+..+ .....+...++..++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRG-FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 47877776665544443 578899999988875532 2334667888899988776 57888999999999999998
Q ss_pred chHHHHHH
Q 005406 350 VPRLYNRI 357 (698)
Q Consensus 350 ~P~~~~~l 357 (698)
.+.....+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 87765544
No 257
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=21.29 E-value=4.3e+02 Score=28.99 Aligned_cols=55 Identities=18% Similarity=0.304 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecC---CCCCHHHHHHHHhhccceEEEeccc
Q 005406 137 KGVRIGLYLINRPEWLIVDHACSAYSYISVPLY---DTLGPDAVKYVVNHAEIEAIFCIPQ 194 (698)
Q Consensus 137 ~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~---~~~~~~~l~~il~~~~~~~v~~~~~ 194 (698)
|||.|++ ..+-|.-+.-+.-..|+-+++++ ..+.++.++..++..+++++++.+.
T Consensus 178 pGd~v~v---E~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 178 PGDTVLV---EDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred CCCEEEE---cCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 5665555 23334444444444555555442 2567778888887778888877654
No 258
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=21.27 E-value=6.2e+02 Score=26.04 Aligned_cols=63 Identities=10% Similarity=-0.073 Sum_probs=46.5
Q ss_pred HhCCCCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEeccc
Q 005406 131 LFHGLQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ 194 (698)
Q Consensus 131 ~~~gv~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~ 194 (698)
.+.|..+++.|...+ .+-.-..+-++|...|..++.+-|...+......++..++++++++..
T Consensus 44 ~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 44 AKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 333444456665554 456666777888899998888877777777788999999999998765
No 259
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=20.89 E-value=5.3e+02 Score=28.87 Aligned_cols=95 Identities=19% Similarity=0.174 Sum_probs=64.5
Q ss_pred CCeEEEEecCCCCCCcceeeechHHHHHHHHhcccc----cccCCCcEEEEcCChhhHHHHHH-HHHHHHhCcEEEEe--
Q 005406 256 EDIATICYTSGTTGTPKGAVLTHGNLISNVAGFSLM----VQFYPSDIYMSYLPLAHIYERAN-QIVSVYYGVAVGFY-- 328 (698)
Q Consensus 256 ~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~-~~~~l~~G~~~~~~-- 328 (698)
+..| |+|-+-.++. -.+|.+.+...+..+... .+. ++|+++.++|..- .... .++++..|+.....
T Consensus 25 ~~~a-ii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~p--e~~~a~LA~~riGAI~~~vf~ 97 (528)
T COG0365 25 DDTA-IIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSP--EAVIALLATARIGAIPAVVSP 97 (528)
T ss_pred CceE-EEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCH--HHHHHHHHHHHcCCEEeeccc
Confidence 4444 5555544444 677888876665544443 446 9999999999874 3343 55666677654333
Q ss_pred CCChhhHHHHHhhhcCcEEeechHHHHHH
Q 005406 329 QGDNLKLMDDLAVLKPTIFPSVPRLYNRI 357 (698)
Q Consensus 329 ~~~~~~l~~~i~~~~~t~~~~~P~~~~~l 357 (698)
.+.+..+...+...++.++++....+.+.
T Consensus 98 ~f~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 98 GLSAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CCCHHHHHHHHHccCCCEEEEeccccccc
Confidence 27899999999999999999776666543
No 260
>PLN03013 cysteine synthase
Probab=20.88 E-value=6.4e+02 Score=27.33 Aligned_cols=66 Identities=8% Similarity=0.013 Sum_probs=49.0
Q ss_pred HHHhCC-CCCCCEEEEEcCCCHhHHHHHHHHHhcCCeEEecCCCCCHHHHHHHHhhccceEEEeccc
Q 005406 129 GLLFHG-LQKGVRIGLYLINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYVVNHAEIEAIFCIPQ 194 (698)
Q Consensus 129 ~L~~~g-v~~g~~V~i~~~n~~e~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~v~~~~~ 194 (698)
.+.+.| +++|....|....+---+.+-++|...|..++.+-|...+.+....++..++++++++..
T Consensus 164 ~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 164 DAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 344455 478865556666666777777788889998777766666777788889999999999754
No 261
>COG0043 UbiD 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism]
Probab=20.77 E-value=6e+02 Score=27.90 Aligned_cols=53 Identities=11% Similarity=0.058 Sum_probs=36.7
Q ss_pred EEccCCCeEecCCceeecchHHHHHHhcCcCceeEEEEEcCCCCeEEEEEEcChh
Q 005406 540 IIDRKKNIFKLAQGEYVAPEKIENVYAKCKFVLQCFIYGDSFNSCLVAIVAVDPD 594 (698)
Q Consensus 540 i~GR~~d~ikls~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~~va~vv~~~~ 594 (698)
+.||--+.-.+ -|..++..-+..+=.+.|.|.++...... ..+..|+|..++.
T Consensus 307 ~~G~pp~e~~~-mG~~~e~~~~p~~~~~~Pev~d~~lp~~g-~~~~~avvsikk~ 359 (477)
T COG0043 307 VPGKPPHEDAL-MGVALEEIFLPLLKKQVPEVVDVRLPPEG-CFHLLAVVSIKKR 359 (477)
T ss_pred cCCCCcchhhh-hhhhhhHHHHHHHHHhCCCeEEEEcCCCc-ceEEEEEEEEcCC
Confidence 56776666343 48777777666666789999998876543 3467788777653
No 262
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=20.44 E-value=8e+02 Score=24.32 Aligned_cols=70 Identities=10% Similarity=0.113 Sum_probs=45.1
Q ss_pred HHHHHHHHHhCC-CCCCCEEEEEcCCCHhHHHHHHHHHhc------C--CeEEecCCCC---CHHHHHHHHhhccceEEE
Q 005406 123 RKEIGSGLLFHG-LQKGVRIGLYLINRPEWLIVDHACSAY------S--YISVPLYDTL---GPDAVKYVVNHAEIEAIF 190 (698)
Q Consensus 123 ~~~la~~L~~~g-v~~g~~V~i~~~n~~e~~~~~lA~~~~------G--~~~vpl~~~~---~~~~l~~il~~~~~~~v~ 190 (698)
..++...+.+.+ +.+|++|+|...-+.+.++++..+... | ..++-++... ..+.+..+.+..+....+
T Consensus 13 ~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v 92 (258)
T PRK10696 13 RRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHI 92 (258)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEE
Confidence 345555666654 578999999999999998877666442 2 3444555543 334456666666666655
Q ss_pred ec
Q 005406 191 CI 192 (698)
Q Consensus 191 ~~ 192 (698)
.+
T Consensus 93 ~~ 94 (258)
T PRK10696 93 EE 94 (258)
T ss_pred EE
Confidence 54
No 263
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=20.31 E-value=3e+02 Score=26.61 Aligned_cols=27 Identities=11% Similarity=0.251 Sum_probs=23.9
Q ss_pred EecCCCCCHHHHHHHHhhccceEEEec
Q 005406 166 VPLYDTLGPDAVKYVVNHAEIEAIFCI 192 (698)
Q Consensus 166 vpl~~~~~~~~l~~il~~~~~~~v~~~ 192 (698)
+.++|..|.+.+.++|.+...-.+.+-
T Consensus 114 v~lnP~Tp~~~i~~~l~~vD~VllMsV 140 (220)
T COG0036 114 LVLNPATPLEALEPVLDDVDLVLLMSV 140 (220)
T ss_pred EEECCCCCHHHHHHHHhhCCEEEEEeE
Confidence 788999999999999999988887764
No 264
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only]
Probab=20.23 E-value=1.6e+02 Score=29.32 Aligned_cols=69 Identities=23% Similarity=0.215 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHhCCCCCceEEEeecCCccCCceEEeHHHHHHHHHHHHHHHHhC--CCCCCC-EEEEEcCCCHhHHH
Q 005406 79 GTLHDNFIYAVENYPDYKYLGTRVRVDGTVGGYKWMTYGEVSAARKEIGSGLLFH--GLQKGV-RIGLYLINRPEWLI 153 (698)
Q Consensus 79 ~tl~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~--gv~~g~-~V~i~~~n~~e~~~ 153 (698)
.-++++++++.+..| |+++. |.-..-.-.--|++|...+..+.++|... |++.++ .|-|...|.++.+-
T Consensus 197 r~Ihely~rA~~~aP---civFi---DE~DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvtIaaTN~p~~LD 268 (368)
T COG1223 197 RRIHELYERARKAAP---CIVFI---DELDAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVTIAATNRPELLD 268 (368)
T ss_pred HHHHHHHHHHHhcCC---eEEEe---hhhhhhhhhhhHHHhcccHHHHHHHHHHhccCcccCCceEEEeecCChhhcC
Confidence 446777776666554 55443 21111111246999999998888888753 888777 78888899988653
No 265
>PF14706 Tnp_DNA_bind: Transposase DNA-binding; PDB: 3ECP_A 4DM0_A 1MUS_A 1MUH_A 1MM8_A.
Probab=20.19 E-value=55 Score=24.15 Aligned_cols=23 Identities=17% Similarity=0.231 Sum_probs=19.6
Q ss_pred chHHHhhhHHHhhhccccCCCCC
Q 005406 3 DSSAQRRFKAVQRHLTSTNTDRC 25 (698)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~ 25 (698)
|.++-+||..+++.|+.+|+.++
T Consensus 14 D~Rl~~Rl~~l~~~la~~p~~Si 36 (58)
T PF14706_consen 14 DKRLTRRLVKLAESLAEKPGASI 36 (58)
T ss_dssp SHHHHHHHHHHHHHHHHTTTS-H
T ss_pred cchHHHHHHHHHHHHHHCCCCcc
Confidence 56788999999999999998655
Done!