Query 005409
Match_columns 698
No_of_seqs 342 out of 3386
Neff 7.4
Searched_HMMs 29240
Date Tue Mar 26 00:32:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005409.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005409hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 1.4E-67 4.8E-72 612.0 43.8 529 88-680 7-623 (632)
2 1ots_A Voltage-gated CLC-type 100.0 3.2E-65 1.1E-69 570.7 45.0 418 88-565 32-451 (465)
3 3nd0_A SLL0855 protein; CLC fa 100.0 1.3E-65 4.4E-70 572.1 40.9 426 78-565 17-443 (466)
4 4ene_A CLC-EC1, H(+)/CL(-) exc 100.0 8E-65 2.7E-69 564.2 44.6 415 88-564 17-435 (446)
5 3org_A CMCLC; transporter, tra 99.8 1.6E-19 5.5E-24 209.2 16.1 189 349-550 10-209 (632)
6 1ots_A Voltage-gated CLC-type 99.6 6.6E-15 2.3E-19 164.2 17.9 193 348-559 34-239 (465)
7 3nd0_A SLL0855 protein; CLC fa 99.6 1.4E-14 4.8E-19 161.3 18.2 193 348-560 30-235 (466)
8 4ene_A CLC-EC1, H(+)/CL(-) exc 99.6 3.8E-14 1.3E-18 157.2 19.8 192 348-559 19-224 (446)
9 4esy_A CBS domain containing m 98.6 6.7E-08 2.3E-12 92.4 6.4 60 620-679 14-73 (170)
10 3lv9_A Putative transporter; C 98.5 3.6E-07 1.2E-11 84.9 8.8 63 621-683 20-85 (148)
11 3i8n_A Uncharacterized protein 98.4 2.6E-07 8.8E-12 84.0 7.2 73 608-681 56-128 (130)
12 3nqr_A Magnesium and cobalt ef 98.4 3.2E-07 1.1E-11 83.0 7.7 72 608-680 53-124 (127)
13 2rih_A Conserved protein with 98.4 4.7E-07 1.6E-11 83.3 8.3 71 623-693 4-76 (141)
14 3gby_A Uncharacterized protein 98.4 1.6E-07 5.5E-12 85.0 4.7 58 624-681 68-125 (128)
15 2ef7_A Hypothetical protein ST 98.4 6.2E-07 2.1E-11 81.4 8.6 61 622-683 2-62 (133)
16 3kpb_A Uncharacterized protein 98.4 4.1E-07 1.4E-11 81.3 7.0 59 623-681 61-119 (122)
17 3gby_A Uncharacterized protein 98.4 2.3E-07 7.9E-12 84.0 5.4 59 622-681 3-61 (128)
18 2d4z_A Chloride channel protei 98.4 5.6E-07 1.9E-11 92.0 8.8 63 621-683 10-74 (250)
19 3lv9_A Putative transporter; C 98.4 6.4E-07 2.2E-11 83.2 8.0 72 608-681 73-144 (148)
20 2yzi_A Hypothetical protein PH 98.4 4.9E-07 1.7E-11 82.7 6.9 58 621-678 4-61 (138)
21 4esy_A CBS domain containing m 98.4 2.2E-07 7.5E-12 88.8 4.6 60 621-681 102-161 (170)
22 2p9m_A Hypothetical protein MJ 98.4 3.6E-07 1.2E-11 83.5 5.7 61 621-681 5-66 (138)
23 3fhm_A Uncharacterized protein 98.3 7.7E-07 2.6E-11 84.4 8.0 65 619-683 19-86 (165)
24 3jtf_A Magnesium and cobalt ef 98.3 1.2E-06 4E-11 79.6 8.8 71 608-681 55-125 (129)
25 3lfr_A Putative metal ION tran 98.3 9.1E-07 3.1E-11 81.1 7.9 73 608-681 53-126 (136)
26 3kxr_A Magnesium transporter, 98.3 9.1E-07 3.1E-11 87.6 8.4 64 622-685 114-177 (205)
27 3k2v_A Putative D-arabinose 5- 98.3 5.3E-07 1.8E-11 83.9 6.3 60 623-682 27-88 (149)
28 3lfr_A Putative metal ION tran 98.3 3.2E-07 1.1E-11 84.3 4.5 59 623-681 2-63 (136)
29 3hf7_A Uncharacterized CBS-dom 98.3 5.5E-07 1.9E-11 82.0 6.0 58 623-681 69-126 (130)
30 4gqw_A CBS domain-containing p 98.3 7.4E-07 2.5E-11 82.5 7.0 62 622-683 83-144 (152)
31 3lhh_A CBS domain protein; str 98.3 1.1E-06 3.7E-11 84.2 8.2 72 608-681 92-163 (172)
32 1pbj_A Hypothetical protein; s 98.3 8.5E-07 2.9E-11 79.4 6.9 58 624-682 1-58 (125)
33 3oco_A Hemolysin-like protein 98.3 9.7E-07 3.3E-11 82.6 7.6 72 608-681 71-142 (153)
34 3kpb_A Uncharacterized protein 98.3 7.5E-07 2.6E-11 79.5 6.5 58 625-682 2-59 (122)
35 2ef7_A Hypothetical protein ST 98.3 1.2E-06 4E-11 79.5 7.6 62 622-683 65-126 (133)
36 3sl7_A CBS domain-containing p 98.3 1.1E-06 3.6E-11 84.1 7.3 62 622-683 96-157 (180)
37 3i8n_A Uncharacterized protein 98.3 4.8E-07 1.6E-11 82.2 4.6 62 621-682 3-67 (130)
38 3lqn_A CBS domain protein; csg 98.3 8.3E-07 2.8E-11 82.5 6.1 63 619-681 10-74 (150)
39 3fv6_A YQZB protein; CBS domai 98.3 1.3E-06 4.4E-11 82.3 7.4 62 618-680 11-72 (159)
40 3fio_A A cystathionine beta-sy 98.2 2.2E-06 7.4E-11 68.9 7.5 49 633-682 1-49 (70)
41 3lhh_A CBS domain protein; str 98.2 1.4E-06 4.9E-11 83.3 7.5 62 621-682 39-103 (172)
42 3k6e_A CBS domain protein; str 98.2 1E-06 3.5E-11 83.2 6.4 61 620-682 82-142 (156)
43 3fv6_A YQZB protein; CBS domai 98.2 1.5E-06 5E-11 82.0 7.4 64 621-684 78-146 (159)
44 2o16_A Acetoin utilization pro 98.2 1.4E-06 4.8E-11 82.2 7.2 61 621-682 75-135 (160)
45 2rc3_A CBS domain; in SITU pro 98.2 1.7E-06 5.8E-11 78.8 7.5 61 621-682 71-131 (135)
46 3lqn_A CBS domain protein; csg 98.2 2.5E-06 8.5E-11 79.2 8.6 61 621-683 84-144 (150)
47 1pbj_A Hypothetical protein; s 98.2 1.6E-06 5.4E-11 77.6 7.0 59 622-681 63-121 (125)
48 2nyc_A Nuclear protein SNF4; b 98.2 1.6E-06 5.6E-11 79.5 6.9 61 622-682 75-141 (144)
49 1o50_A CBS domain-containing p 98.2 1.6E-06 5.5E-11 81.4 7.0 61 621-682 93-153 (157)
50 3l2b_A Probable manganase-depe 98.2 1E-06 3.6E-11 89.2 6.0 62 620-681 181-243 (245)
51 3ctu_A CBS domain protein; str 98.2 2.1E-06 7.3E-11 80.3 7.7 62 621-682 12-75 (156)
52 2uv4_A 5'-AMP-activated protei 98.2 2.1E-06 7.3E-11 80.1 7.7 59 623-681 86-150 (152)
53 2o16_A Acetoin utilization pro 98.2 1.8E-06 6.1E-11 81.5 7.2 60 622-681 3-62 (160)
54 3ghd_A A cystathionine beta-sy 98.2 2.8E-06 9.7E-11 69.1 7.4 47 633-680 1-47 (70)
55 2emq_A Hypothetical conserved 98.2 1.5E-06 5.1E-11 81.3 6.3 62 620-681 7-70 (157)
56 3fhm_A Uncharacterized protein 98.2 2.1E-06 7.1E-11 81.4 7.2 62 620-682 89-150 (165)
57 3l2b_A Probable manganase-depe 98.2 2.3E-06 7.9E-11 86.6 7.8 59 623-681 6-64 (245)
58 2p9m_A Hypothetical protein MJ 98.2 2E-06 6.8E-11 78.5 6.6 60 622-681 71-135 (138)
59 3nqr_A Magnesium and cobalt ef 98.2 1E-06 3.6E-11 79.6 4.6 59 623-681 2-63 (127)
60 3k6e_A CBS domain protein; str 98.2 1.7E-06 5.9E-11 81.7 6.3 60 624-683 15-76 (156)
61 3jtf_A Magnesium and cobalt ef 98.2 1.3E-06 4.5E-11 79.2 5.3 60 622-681 3-65 (129)
62 2rih_A Conserved protein with 98.2 2.5E-06 8.4E-11 78.4 7.2 59 622-681 69-127 (141)
63 1vr9_A CBS domain protein/ACT 98.2 3.2E-06 1.1E-10 84.0 8.4 60 623-682 71-130 (213)
64 3oi8_A Uncharacterized protein 98.2 2.7E-06 9.1E-11 80.0 7.3 68 608-677 88-155 (156)
65 3oco_A Hemolysin-like protein 98.2 1.8E-06 6.3E-11 80.7 6.1 63 621-683 17-83 (153)
66 1yav_A Hypothetical protein BS 98.2 2.3E-06 8E-11 80.4 6.8 61 621-681 11-73 (159)
67 3hf7_A Uncharacterized CBS-dom 98.2 2.6E-06 9E-11 77.4 6.7 59 624-682 2-63 (130)
68 2pfi_A Chloride channel protei 98.2 3.1E-06 1.1E-10 79.5 7.5 61 621-681 10-72 (164)
69 2j9l_A Chloride channel protei 98.1 3.7E-06 1.2E-10 80.8 7.9 62 622-684 106-167 (185)
70 4fry_A Putative signal-transdu 98.1 3.1E-06 1.1E-10 79.3 7.2 62 622-684 76-137 (157)
71 2yzi_A Hypothetical protein PH 98.1 4.3E-06 1.5E-10 76.3 7.4 60 622-682 70-129 (138)
72 1pvm_A Conserved hypothetical 98.1 3.9E-06 1.3E-10 81.1 7.4 59 623-681 8-66 (184)
73 3oi8_A Uncharacterized protein 98.1 1.1E-06 3.9E-11 82.5 3.5 62 620-681 34-98 (156)
74 2emq_A Hypothetical conserved 98.1 5.4E-06 1.9E-10 77.4 8.1 60 622-683 81-140 (157)
75 1y5h_A Hypothetical protein RV 98.1 2.6E-06 8.7E-11 77.3 5.5 57 622-678 6-62 (133)
76 1y5h_A Hypothetical protein RV 98.1 2.8E-06 9.5E-11 77.0 5.8 58 622-680 72-129 (133)
77 1pvm_A Conserved hypothetical 98.1 2.6E-06 8.8E-11 82.3 5.8 61 621-681 72-132 (184)
78 4gqw_A CBS domain-containing p 98.1 4E-06 1.4E-10 77.5 6.8 58 622-679 3-62 (152)
79 2j9l_A Chloride channel protei 98.1 4.3E-06 1.5E-10 80.3 7.1 64 619-682 6-77 (185)
80 3ocm_A Putative membrane prote 98.1 5.9E-06 2E-10 79.3 7.9 63 620-682 32-97 (173)
81 2yzq_A Putative uncharacterize 98.1 2.1E-06 7.3E-11 88.2 5.0 60 622-681 219-278 (282)
82 3ctu_A CBS domain protein; str 98.1 4.2E-06 1.4E-10 78.3 6.5 59 623-683 85-143 (156)
83 1o50_A CBS domain-containing p 98.1 4.5E-06 1.5E-10 78.3 6.7 61 620-681 12-73 (157)
84 1yav_A Hypothetical protein BS 98.1 4.8E-06 1.7E-10 78.2 6.5 61 621-683 83-143 (159)
85 2rc3_A CBS domain; in SITU pro 98.0 6.3E-06 2.2E-10 74.9 7.1 55 624-679 6-63 (135)
86 2nyc_A Nuclear protein SNF4; b 98.0 8.8E-06 3E-10 74.5 7.9 59 623-681 7-68 (144)
87 3ddj_A CBS domain-containing p 98.0 4.6E-06 1.6E-10 86.5 6.5 63 622-684 225-287 (296)
88 2oux_A Magnesium transporter; 98.0 6.9E-06 2.4E-10 85.5 7.7 63 622-684 199-261 (286)
89 2pfi_A Chloride channel protei 98.0 1.1E-05 3.6E-10 75.8 7.8 61 623-684 83-149 (164)
90 3sl7_A CBS domain-containing p 98.0 5.7E-06 1.9E-10 78.9 5.9 56 623-678 3-60 (180)
91 2yvy_A MGTE, Mg2+ transporter 98.0 6.7E-06 2.3E-10 85.1 6.7 62 622-683 197-258 (278)
92 3kh5_A Protein MJ1225; AMPK, A 98.0 1.2E-05 4.2E-10 82.2 8.5 62 623-684 83-144 (280)
93 3ocm_A Putative membrane prote 98.0 9E-06 3.1E-10 78.1 7.0 71 608-681 86-156 (173)
94 3k2v_A Putative D-arabinose 5- 98.0 6.3E-06 2.1E-10 76.6 5.7 56 622-678 93-148 (149)
95 3kh5_A Protein MJ1225; AMPK, A 98.0 4.1E-06 1.4E-10 85.7 4.5 58 622-679 221-278 (280)
96 2uv4_A 5'-AMP-activated protei 98.0 9.3E-06 3.2E-10 75.7 6.5 62 619-682 18-79 (152)
97 2zy9_A Mg2+ transporter MGTE; 97.9 1.1E-05 3.9E-10 89.9 8.1 62 622-683 217-278 (473)
98 3pc3_A CG1753, isoform A; CBS, 97.9 9.3E-06 3.2E-10 91.9 7.4 74 620-693 380-456 (527)
99 3ddj_A CBS domain-containing p 97.9 1.4E-05 4.7E-10 82.9 7.4 74 608-681 140-213 (296)
100 3t4n_C Nuclear protein SNF4; C 97.9 1.9E-05 6.5E-10 82.9 8.5 61 622-682 254-320 (323)
101 3usb_A Inosine-5'-monophosphat 97.8 1.6E-05 5.6E-10 89.4 7.1 64 621-684 172-236 (511)
102 2d4z_A Chloride channel protei 97.8 3E-05 1E-09 79.1 7.6 58 623-681 187-245 (250)
103 4fry_A Putative signal-transdu 97.8 1.9E-05 6.4E-10 73.8 5.0 57 624-681 7-69 (157)
104 3kxr_A Magnesium transporter, 97.7 5.3E-05 1.8E-09 74.8 7.9 59 621-679 51-112 (205)
105 2qrd_G Protein C1556.08C; AMPK 97.7 4.9E-05 1.7E-09 80.1 7.5 61 623-683 250-316 (334)
106 2v8q_E 5'-AMP-activated protei 97.7 6.1E-05 2.1E-09 79.3 8.2 61 623-683 258-324 (330)
107 4af0_A Inosine-5'-monophosphat 97.7 6.8E-06 2.3E-10 90.8 0.2 73 608-684 188-260 (556)
108 3t4n_C Nuclear protein SNF4; C 97.6 6.4E-05 2.2E-09 78.8 7.5 63 621-683 184-249 (323)
109 2v8q_E 5'-AMP-activated protei 97.6 7.5E-05 2.6E-09 78.6 7.8 64 618-681 29-95 (330)
110 1vr9_A CBS domain protein/ACT 97.6 5.8E-05 2E-09 74.8 6.1 58 623-680 12-69 (213)
111 1me8_A Inosine-5'-monophosphat 97.6 9.7E-06 3.3E-10 91.1 0.2 75 608-684 147-223 (503)
112 2oux_A Magnesium transporter; 97.6 6.5E-05 2.2E-09 78.1 6.4 59 621-679 134-197 (286)
113 2yzq_A Putative uncharacterize 97.6 8E-05 2.7E-09 76.3 6.6 60 622-681 58-118 (282)
114 1zfj_A Inosine monophosphate d 97.5 0.00012 4.1E-09 82.0 8.3 61 622-682 150-211 (491)
115 3pc3_A CG1753, isoform A; CBS, 97.5 8.6E-05 2.9E-09 83.9 7.1 75 608-684 433-513 (527)
116 2yvy_A MGTE, Mg2+ transporter 97.5 0.00017 6E-09 74.4 7.9 59 621-679 132-195 (278)
117 4avf_A Inosine-5'-monophosphat 97.4 2.8E-05 9.6E-10 87.0 0.3 75 608-685 134-210 (490)
118 2qrd_G Protein C1556.08C; AMPK 97.3 0.00033 1.1E-08 73.7 7.8 60 623-682 181-243 (334)
119 2cu0_A Inosine-5'-monophosphat 97.2 4.7E-05 1.6E-09 85.2 -0.3 60 622-681 148-207 (486)
120 1vrd_A Inosine-5'-monophosphat 97.2 5.7E-05 2E-09 84.7 0.0 62 622-683 153-216 (494)
121 4fxs_A Inosine-5'-monophosphat 97.1 4.2E-05 1.4E-09 85.7 -1.4 62 622-683 147-210 (496)
122 2zy9_A Mg2+ transporter MGTE; 97.1 0.00044 1.5E-08 77.1 6.4 59 621-679 152-215 (473)
123 4fxs_A Inosine-5'-monophosphat 97.1 0.00027 9.4E-09 79.1 4.7 54 624-677 89-142 (496)
124 3usb_A Inosine-5'-monophosphat 96.8 0.00092 3.2E-08 75.1 5.6 55 624-678 113-169 (511)
125 1vrd_A Inosine-5'-monophosphat 96.7 0.00024 8.2E-09 79.6 0.1 55 624-678 95-149 (494)
126 1zfj_A Inosine monophosphate d 96.7 0.0016 5.5E-08 72.8 6.4 55 624-678 90-146 (491)
127 1jcn_A Inosine monophosphate d 96.7 6E-05 2.1E-09 85.0 -5.5 60 622-681 171-232 (514)
128 1me8_A Inosine-5'-monophosphat 96.7 0.00026 9.1E-09 79.4 -0.2 57 622-678 94-154 (503)
129 4avf_A Inosine-5'-monophosphat 96.3 0.0006 2.1E-08 76.2 -0.4 54 624-678 88-141 (490)
130 1jcn_A Inosine monophosphate d 96.1 0.00062 2.1E-08 76.7 -1.8 56 624-679 108-166 (514)
131 4af0_A Inosine-5'-monophosphat 95.7 0.0019 6.4E-08 71.6 -0.1 52 627-678 141-195 (556)
132 2cu0_A Inosine-5'-monophosphat 94.7 0.0053 1.8E-07 68.5 -0.1 53 625-678 94-146 (486)
133 1tif_A IF3-N, translation init 23.8 1.1E+02 0.0039 24.6 5.0 28 655-682 13-40 (78)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=1.4e-67 Score=611.98 Aligned_cols=529 Identities=19% Similarity=0.231 Sum_probs=378.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 005409 88 NSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIRVVLVPACGGFIVSILNQLRYALSL 167 (698)
Q Consensus 88 ~~~~~~~a~lvGvl~G~~~~~f~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~p~~ggl~vgll~~~~~~~~~ 167 (698)
-++++++++++|+++|+++++|+.+++++++++..... +... ...|+.++++|++++++++++.++. .
T Consensus 7 ~~r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~----~ 74 (632)
T 3org_A 7 LLRLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISR-----LAGR---FAGYILYVVSGVALCLLSTFWCAVL----S 74 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HSCH---HHHHHHHHHHHHHHHHHHHHHHHHS----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----Hhhh---hHHHHHHHHHHHHHHHHHHHHHHhc----C
Confidence 45778899999999999999999999999886532110 0000 1234445678999998888876432 2
Q ss_pred CCCCCcchhhccccCCCCCCCcccccccchhhhcccCCCCCcccccchhhhhHHHHHHHHHHHHHhcCCccCCchhHHHH
Q 005409 168 DDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSVEI 247 (698)
Q Consensus 168 ~~g~g~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~ltl~sG~s~G~EgP~v~i 247 (698)
+...|+||||++.... +. .. +.++...+++.+.|++++++++++|+|+|||||++|+
T Consensus 75 p~a~GsGIp~v~~~l~--g~--------~~-------------~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqi 131 (632)
T 3org_A 75 TEAEGSGLPQMKSILS--GF--------YD-------------KMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHI 131 (632)
T ss_dssp GGGCBCSHHHHHHHTT--TT--------HH-------------HHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHH
T ss_pred CccCCCCHHHHHHHHh--Cc--------cc-------------cccccccHHHHHHHHHHHHHHHhcCCCccccchHHHH
Confidence 3345788999875321 00 00 0122344567789999999999999999999999999
Q ss_pred HHHHHHHHHh--hcC---CChhhHHHHHHhhhhHhHHHHhhhhHHHHHHHHHHhcccCcccchhhhhhhHHHHHHHHHHH
Q 005409 248 GKSIAKGVGN--LFD---RRPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVI 322 (698)
Q Consensus 248 Ga~ig~~l~~--~~~---~~~~~~r~l~~~G~aAgiaa~F~APl~G~lFa~E~~~~~~~~~~~~~~~~~~~~~~~~aav~ 322 (698)
||++|+.+++ +|+ .++++||.+++||+|||+||+||||++|++|++|+++.++. .+++++ ++++|++
T Consensus 132 Ga~ig~~~~~~~~f~~~~~~~~~~r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~-------~~~~~~-~~~as~~ 203 (632)
T 3org_A 132 ACIIAHQFYRLGVFKELCTDRALRLQTLAAACAVGLASSFGAPLGGVLYSIETIASFYL-------VQAFWK-GVLSALS 203 (632)
T ss_dssp HHHHHHHHTTSHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEE-------TTHHHH-HHHHHHH
T ss_pred HHHHHHHHhhhhhhccccCCHHHHHHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHh-------HHHHHH-HHHHHHH
Confidence 9999999999 776 57788999999999999999999999999999999976432 234454 6889999
Q ss_pred HHHHHhhhcCCCC---cccc--c-cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHH
Q 005409 323 ASVVSEVGLGSEP---AFKV--P-EYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMG 396 (698)
Q Consensus 323 a~~v~~~~~g~~~---~f~~--~-~~~~~~~~~l~~~illGil~Gl~g~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 396 (698)
|+++++.+.++.+ .|.. + +++ +++.++ +++++|++||++|.+|++++.++.+. ++.+..+.+++++++++
T Consensus 204 a~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l-~~~~lGi~~Gl~g~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 279 (632)
T 3org_A 204 GAIVYELLYTTPLVEAFEGTNFDASDV-SRTQTL-LYAILGALMGVLGALFIRCVRSIYEL--RMRHYPGTNRYFLVGVV 279 (632)
T ss_dssp HHHHTTC------------------CC-CCSCTH-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHSSTTCCTHHHHHHH
T ss_pred HHHHHHHhccCccccccccccccccCC-CcHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhcchhHHHHHHHH
Confidence 9998886554332 2221 1 122 356788 99999999999999999998876543 22222344567888888
Q ss_pred HHHHHHHHHHhhccccC--cHHHHHHHHccCCCCc--cccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHhhHHHH
Q 005409 397 GLAVGLIALMFPEILYW--GFENVDILLESRPFVK--GLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGM 472 (698)
Q Consensus 397 gllvg~i~~~~P~~~g~--G~~~i~~ll~~~~~~~--~~s~~~l~~~~~~K~l~t~lt~gsG~~GG~f~Psl~iGA~~G~ 472 (698)
+++++ .+++|+.+|. +++.++.++++..+.. ..++..++.++++|+++|++|+|+|.|||+|+|++++||++|+
T Consensus 280 ~~~~~--~l~~p~~~g~~~~~~~i~~l~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~s~g~g~pGGif~P~l~iGA~~G~ 357 (632)
T 3org_A 280 ALFAS--ALQYPFRLFALDPRATINDLFKAVPLYQTDHFGWTELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFGR 357 (632)
T ss_dssp HHHHH--HHTTTC------CHHHHHHHHSCC----------CCSSHHHHHHHHHHHHHTTSSSBCBCHHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHhcCCcHHHHHHHHHcCCccccccchhHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHH
Confidence 88776 3578888765 6888988887653211 1222245667889999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCccccccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHhcChhhHHHHHHHHHHHHHHhhcc
Q 005409 473 AYGKFINFAIAQSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQ 552 (698)
Q Consensus 473 ~~g~~~~~~~p~~~~~~~~~~~~~~~p~~~alvGaaA~la~v~~aPls~~vi~~Eltg~~~~llPlmiav~va~~v~~~~ 552 (698)
++|.+++..+|. ..+|+.||++||||+++|++|+|++++ |++||||++++++|+|+++++|+++++.+
T Consensus 358 ~~g~~~~~~~p~-----------~~~p~~~a~vGmaa~~~~v~~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~v~~~~ 425 (632)
T 3org_A 358 LYGELMRVVFGN-----------AIVPGSYAVVGAAAFTAGVTRALSCAV-IIFEVTGQIRHLVPVLISVLLAVIVGNAF 425 (632)
T ss_dssp HHHHHHHHHHCT-----------TSCHHHHHHHHHHHHHHHHSCCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCc-----------ccchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHHh
Confidence 999999877764 146899999999999999999999875 89999999999999999999999998754
Q ss_pred ccccchhhhhHhhhhc----------ccccccccccc--cccccccc----chhhhccc--cccccccccccc------c
Q 005409 553 MRRRDVKETKVAVHAN----------TNRKRQFEIYT--SRTRGLSS----SDLLAEEE--PYAINLCEVESS------L 608 (698)
Q Consensus 553 ~~~~~~~~~~~~~~~~----------~~~~~~~~i~~--~~~~~l~~----~~lL~~~~--~~~~~l~~v~~~------l 608 (698)
++++|+.....+.. ....+..++|. .+...++. .|..+... ..++.++.+++. +
T Consensus 426 --~~~iY~~~~~~k~lp~l~~~~~~~~~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiV 503 (632)
T 3org_A 426 --NRSLYETLVLMKHLPYMPILRRDRSPEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAI 503 (632)
T ss_dssp --CCCHHHHHHHHTTCCEEEEECTTCCTTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEE
T ss_pred --CCCHHHHHHHhcCCCccccccccccccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEE
Confidence 46899977543321 11223344454 33333332 23322222 233445555421 2
Q ss_pred ccccchhhhhh-----------------------------hh-------------------c-cccchhccccCceEEcC
Q 005409 609 CIDDWNLEVEE-----------------------------LK-------------------R-RVFVSEVMRTRYVTVLM 639 (698)
Q Consensus 609 ~~~d~~~~~~~-----------------------------~~-------------------~-~i~v~dvM~~~~~~v~~ 639 (698)
+.+|+.+...+ .. + .-+++|+|+++++++++
T Consensus 504 t~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~ 583 (632)
T 3org_A 504 SRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTS 583 (632)
T ss_dssp SHHHHTTTTTTC-------------------------------------------------------CCSCCCCCCEEET
T ss_pred EHHHHHHHHHHHhhhcccccccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecC
Confidence 33333211000 00 0 01388999999999999
Q ss_pred CCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHH
Q 005409 640 TTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (698)
Q Consensus 640 ~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l 680 (698)
++++.|+.+.|.+++.+.+||+ ++|+++|+||++|+.+.+
T Consensus 584 ~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~~ 623 (632)
T 3org_A 584 YSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYGY 623 (632)
T ss_dssp TCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEECC
T ss_pred CCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHHH
Confidence 9999999999999999999999 679999999999997653
No 2
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=100.00 E-value=3.2e-65 Score=570.70 Aligned_cols=418 Identities=22% Similarity=0.333 Sum_probs=348.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcccccCCCchh-HHHHHHHHHHHHHHHHHHHHHHhhcc
Q 005409 88 NSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAI-WIRVVLVPACGGFIVSILNQLRYALS 166 (698)
Q Consensus 88 ~~~~~~~a~lvGvl~G~~~~~f~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-w~~~~l~p~~ggl~vgll~~~~~~~~ 166 (698)
.+.+++.++++|+++|+++.+|+.+++++++++++..+... ....+ |..++++|+++|++++++.+.. .
T Consensus 32 ~~~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ll~~~l~~~~--~- 101 (465)
T 1ots_A 32 PLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTA-------DNYPLLLTVAFLCSAVLAMFGYFLVRKY--A- 101 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-------SSHHHHHHHHHHHHHHHHHHHHHHHHHH--C-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------cccccHHHHHHHHHHHHHHHHHHHHHHh--C-
Confidence 36778899999999999999999999999999886532110 00123 4334678999999998886532 1
Q ss_pred CCCCCCcchhhccccCCCCCCCcccccccchhhhcccCCCCCcccccchhhhhHHHHHHHHHHHHHhcCCccCCchhHHH
Q 005409 167 LDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSVE 246 (698)
Q Consensus 167 ~~~g~g~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~ltl~sG~s~G~EgP~v~ 246 (698)
+...|+||||+++..... +....+++.+.|++++++++++|+|+|||||++|
T Consensus 102 -p~a~GsGip~v~~~l~~~---------------------------~~~~~~r~~~~k~~~~~lti~sG~s~GrEGP~vq 153 (465)
T 1ots_A 102 -PEAGGSGIPEIEGALEDQ---------------------------RPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQ 153 (465)
T ss_dssp -GGGSSCSHHHHHHHHTTC---------------------------SCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHH
T ss_pred -ccccCCChHHHHHHHhCC---------------------------CCCCcHHHHHHHHHHHHHHHhcCCCcCCcchHHH
Confidence 223467799987532110 0112234667899999999999999999999999
Q ss_pred HHHHHHHHHHhhcCC-ChhhHHHHHHhhhhHhHHHHhhhhHHHHHHHHHHhcccCcccchhhhhhhHHHHHHHHHHHHHH
Q 005409 247 IGKSIAKGVGNLFDR-RPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVIASV 325 (698)
Q Consensus 247 iGa~ig~~l~~~~~~-~~~~~r~l~~~G~aAgiaa~F~APl~G~lFa~E~~~~~~~~~~~~~~~~~~~~~~~~aav~a~~ 325 (698)
+|+++|++++|++++ +++++|.+++||+|||+|++||||++|++|++|++..++.. ..+++.+ ++++|++|++
T Consensus 154 iGa~ig~~l~~~~~l~~~~~~r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~-----~~~~~~~-~~~as~~a~~ 227 (465)
T 1ots_A 154 IGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRY-----TLISIKA-VFIGVIMSTI 227 (465)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSC-----CCCCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcch-----HHHHHHH-HHHHHHHHHH
Confidence 999999999999995 89999999999999999999999999999999999754331 1122555 6889999999
Q ss_pred HHhhhcCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHHHHHHHHHHH
Q 005409 326 VSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGLIAL 405 (698)
Q Consensus 326 v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGil~Gl~g~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~lggllvg~i~~ 405 (698)
+++.++|++|.|.++.++..++.++++++++|++||++|.+|++++.+.+++++++.+..+++++++++++|++++++.+
T Consensus 228 v~~~~~G~~~~f~~~~~~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gl~~g~l~~ 307 (465)
T 1ots_A 228 MYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 307 (465)
T ss_dssp HHHHHSCSCCSSCCCCCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCceeecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999998887766778999999999999999999999998887777665432222334789999999999999
Q ss_pred HhhccccCcHHHHHHHHccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHhhHHHHHHHHHHHHhhhcC
Q 005409 406 MFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQS 485 (698)
Q Consensus 406 ~~P~~~g~G~~~i~~ll~~~~~~~~~s~~~l~~~~~~K~l~t~lt~gsG~~GG~f~Psl~iGA~~G~~~g~~~~~~~p~~ 485 (698)
++|+.+|+|++.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.+++..+|+
T Consensus 308 ~~P~~lG~G~~~i~~~~~~~-----~~~~~l~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~- 381 (465)
T 1ots_A 308 VAPATSGGGFNLIPIATAGN-----FSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQ- 381 (465)
T ss_dssp HCGGGSSCSTTHHHHHHHTC-----SCHHHHHHHHHHHHHHHHHHHHTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred HhHhhcCChHHHHHHHHcCC-----chHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHHHHHHHHHHHHHHHHHCCc-
Confidence 99999999999999999874 466678888999999999999999999999999999999999999999887775
Q ss_pred CCccccccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHhcChhhHHHHHHHHHHHHHHhhccccccchhhhhHhh
Q 005409 486 NPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETKVAV 565 (698)
Q Consensus 486 ~~~~~~~~~~~~~p~~~alvGaaA~la~v~~aPls~~vi~~Eltg~~~~llPlmiav~va~~v~~~~~~~~~~~~~~~~~ 565 (698)
...+|+.|+++||+|++++++|+|+|+++|++|+||++++++|+|+++++|+++++. +.++++|+.....
T Consensus 382 ---------~~~~~~~~alvGmaa~~a~v~raPlt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~~-~~~~~iY~~~l~~ 451 (465)
T 1ots_A 382 ---------YHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQF-TGGKPLYSAILAR 451 (465)
T ss_dssp ---------GTCCHHHHHHHHHTHHHHHTSCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHT-TTCCCHHHHHHHH
T ss_pred ---------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHH
Confidence 346799999999999999999999999999999999999999999999999988864 5678999977543
No 3
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=100.00 E-value=1.3e-65 Score=572.14 Aligned_cols=426 Identities=21% Similarity=0.330 Sum_probs=341.3
Q ss_pred cccccCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcccccCCCchhHHHHHHHHHHHHHHHH
Q 005409 78 IIGIDGHEV-GNSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIRVVLVPACGGFIVS 156 (698)
Q Consensus 78 ~~~~~~~~~-~~~~~~~~a~lvGvl~G~~~~~f~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~p~~ggl~vg 156 (698)
..|...+.. .+..+++.++++|+++|+++.+|+.+++++++++++..... ...+ ...|..+++++.+++++++
T Consensus 17 ~~~~~~~~~~~~~~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~-----~~~~-~~~~~l~~~~~~~~~~l~~ 90 (466)
T 3nd0_A 17 PRNLTDSARSLHPRTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQIL-----APIP-PLAWLVTALISGGMVALSF 90 (466)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----TTSC-THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cccc-HHHHHHHHHHHHHHHHHHH
Confidence 344433322 34568899999999999999999999999999988653211 0111 0123322334445555555
Q ss_pred HHHHHHhhccCCCCCCcchhhccccCCCCCCCcccccccchhhhcccCCCCCcccccchhhhhHHHHHHHHHHHHHhcCC
Q 005409 157 ILNQLRYALSLDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGN 236 (698)
Q Consensus 157 ll~~~~~~~~~~~g~g~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~ltl~sG~ 236 (698)
++.+ .. .+...|+||||++...... +.....++...|++++++++++|+
T Consensus 91 ~l~~--~~--~p~a~GsGIp~v~~~l~g~---------------------------~~~~~~~~~~~k~~~~~ltig~G~ 139 (466)
T 3nd0_A 91 WLMK--RF--APDTSGSGIPQIEGHLEGK---------------------------LPLVWQRVLPIKLVGGFLSLGAGM 139 (466)
T ss_dssp HHHT--TT--CGGGSBCSHHHHHHHTTSS---------------------------SCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHH--HH--CCCcCCCCHHHHHHHHcCC---------------------------CCCchHHHHHHHHHHHHHHHhcCC
Confidence 5532 21 2233567899987642110 011223456789999999999999
Q ss_pred ccCCchhHHHHHHHHHHHHHhhcCCChhhHHHHHHhhhhHhHHHHhhhhHHHHHHHHHHhcccCcccchhhhhhhHHHHH
Q 005409 237 SLGPEGPSVEIGKSIAKGVGNLFDRRPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMV 316 (698)
Q Consensus 237 s~G~EgP~v~iGa~ig~~l~~~~~~~~~~~r~l~~~G~aAgiaa~F~APl~G~lFa~E~~~~~~~~~~~~~~~~~~~~~~ 316 (698)
|+|||||++|+|+++|++++|+++++++|+|.+++||+|||+||+||||++|++|++|++..++.. ....+.| +
T Consensus 140 S~GrEGP~vqiGa~ig~~l~~~~~~~~~~~r~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~-----~~~~~~~-~ 213 (466)
T 3nd0_A 140 LAGFEGPTIQMGGSIGQMTGGWFKATQENQRILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRS-----QTLAYHS-L 213 (466)
T ss_dssp SCCTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSS-----CCTTHHH-H
T ss_pred CCCCcchHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhCCchHHHHHHHHhhhccccH-----HHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999999999998755421 1223444 6
Q ss_pred HHHHHHHHHHHhhhcCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHH
Q 005409 317 ILSAVIASVVSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMG 396 (698)
Q Consensus 317 ~~aav~a~~v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGil~Gl~g~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 396 (698)
+++|++|+++++.+.|+++.|+++.++.++..++++++++|++||++|.+|++++.+.++.++++. +.+++++++++
T Consensus 214 ~~as~~a~~v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGi~~Gl~g~lf~~~~~~~~~~~~~~~---~~~~~~~~~l~ 290 (466)
T 3nd0_A 214 LFGCVMATIILRMIRGQSAIISLTEFKRVPLDSLWMFIILGILFGVMGYTFNRGLFKVLDWFDRLP---PLATKWKGFLL 290 (466)
T ss_dssp HHHHHHHHHHHHHHTCSSCSSCCTTCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCceecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---cccHHHHHHHH
Confidence 899999999999999999999998776667889999999999999999999999887665544332 13467789999
Q ss_pred HHHHHHHHHHhhccccCcHHHHHHHHccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHhhHHHHHHHH
Q 005409 397 GLAVGLIALMFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGK 476 (698)
Q Consensus 397 gllvg~i~~~~P~~~g~G~~~i~~ll~~~~~~~~~s~~~l~~~~~~K~l~t~lt~gsG~~GG~f~Psl~iGA~~G~~~g~ 476 (698)
|+++|++.+++|+.+|+||+.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.
T Consensus 291 g~~~g~l~~~~p~~~G~G~~~i~~~~~~~-----~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~ 365 (466)
T 3nd0_A 291 GSIIGILSLFPLPLTDGGDNAVLWAFNSQ-----SHFSTLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVAMAR 365 (466)
T ss_dssp HHHHHHHTTSSSSCSSSSHHHHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCBCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHcCC-----ccHHHHHHHHHHHHHHHHHHHhCCCCCceehHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998765 4667788889999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCccccccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHhcChhhHHHHHHHHHHHHHHhhcccccc
Q 005409 477 FINFAIAQSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRR 556 (698)
Q Consensus 477 ~~~~~~p~~~~~~~~~~~~~~~p~~~alvGaaA~la~v~~aPls~~vi~~Eltg~~~~llPlmiav~va~~v~~~~~~~~ 556 (698)
+++..+|+ ...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++|+++++ .+.++
T Consensus 366 ~~~~~~p~----------~~~~~~~~a~vGmaa~~a~v~~aPlt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~-~~~~~ 434 (466)
T 3nd0_A 366 HFHLLFPS----------QIPEPAVMAIAGMGALVAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAE-ALGGK 434 (466)
T ss_dssp HHHHHCTT----------TCSSTHHHHHHTTSHHHHHHHSCHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHT-TSCCC
T ss_pred HHHHhCCc----------cccCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHH-HhCCC
Confidence 99887775 23578999999999999999999999999999999999999999999999999875 46788
Q ss_pred chhhhhHhh
Q 005409 557 DVKETKVAV 565 (698)
Q Consensus 557 ~~~~~~~~~ 565 (698)
++||...+.
T Consensus 435 ~iY~~~l~r 443 (466)
T 3nd0_A 435 PIYTVLLER 443 (466)
T ss_dssp CHHHHHHHH
T ss_pred ChHHHHHHH
Confidence 999987653
No 4
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=100.00 E-value=8e-65 Score=564.25 Aligned_cols=415 Identities=22% Similarity=0.337 Sum_probs=339.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcccccCCCchhHH---HHHHHHHHHHHHHHHHHHHHhh
Q 005409 88 NSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWI---RVVLVPACGGFIVSILNQLRYA 164 (698)
Q Consensus 88 ~~~~~~~a~lvGvl~G~~~~~f~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~---~~~l~p~~ggl~vgll~~~~~~ 164 (698)
...+++.++++|+++|+++.+|+.+++++++++++...... ..+|+ .+++++.+++++++++.+..
T Consensus 17 ~~~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 85 (446)
T 4ene_A 17 PLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTA---------DNYPLLLTVAFLCSAVLAMFGYFLVRKY-- 85 (446)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------ccchHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 35678899999999999999999999999999886532110 12332 22334556667777665432
Q ss_pred ccCCCCCCcchhhccccCCCCCCCcccccccchhhhcccCCCCCcccccchhhhhHHHHHHHHHHHHHhcCCccCCchhH
Q 005409 165 LSLDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPS 244 (698)
Q Consensus 165 ~~~~~g~g~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~ltl~sG~s~G~EgP~ 244 (698)
. +...|+||||++..... .++.+.+++...|++++++++++|+|+|||||+
T Consensus 86 ~--p~a~GsGip~v~~~l~~---------------------------~~~~~~~r~~~~k~~~~~lti~~G~s~GrEGP~ 136 (446)
T 4ene_A 86 A--PEAGGSGIPEIEGALED---------------------------QRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPT 136 (446)
T ss_dssp C--GGGSSCSHHHHHHHHHT---------------------------CSCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHH
T ss_pred C--cccCCCCHHHHHHHHhC---------------------------CCccchHHHHHHHHHHHHHHHhcCCccCCcchH
Confidence 2 22346779988753110 011223446678999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCChhhHH-HHHHhhhhHhHHHHhhhhHHHHHHHHHHhcccCcccchhhhhhhHHHHHHHHHHHH
Q 005409 245 VEIGKSIAKGVGNLFDRRPRRKV-SLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVIA 323 (698)
Q Consensus 245 v~iGa~ig~~l~~~~~~~~~~~r-~l~~~G~aAgiaa~F~APl~G~lFa~E~~~~~~~~~~~~~~~~~~~~~~~~aav~a 323 (698)
+|+|+++|++++|+++++++++| .+++||+|||+|++||||++|++|++|++..++.. ..+++.+ +++++++|
T Consensus 137 vqiGa~ig~~~~~~~~~~~~~~r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~-----~~~~~~~-~~~as~~a 210 (446)
T 4ene_A 137 VQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRY-----TLISIKA-VFIGVIMS 210 (446)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSC-----CCCCHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcch-----hHHHHHH-HHHHHHHH
Confidence 99999999999999999888886 99999999999999999999999999998754321 1134454 68999999
Q ss_pred HHHHhhhcCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHHHHHHHHH
Q 005409 324 SVVSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGLI 403 (698)
Q Consensus 324 ~~v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGil~Gl~g~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~lggllvg~i 403 (698)
+++++.+.|+++.|++++++..+..++++++++|++||++|.+|++++.+.+++++++.++...+..+.+.++|++++++
T Consensus 211 ~~v~~~~~g~~~~~~~~~~~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~l 290 (446)
T 4ene_A 211 TIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLL 290 (446)
T ss_dssp HHHHHHTTTTCCSCCCCCCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999998877667789999999999999999999999988877776654321112222334667889999
Q ss_pred HHHhhccccCcHHHHHHHHccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHhhHHHHHHHHHHHHhhh
Q 005409 404 ALMFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIA 483 (698)
Q Consensus 404 ~~~~P~~~g~G~~~i~~ll~~~~~~~~~s~~~l~~~~~~K~l~t~lt~gsG~~GG~f~Psl~iGA~~G~~~g~~~~~~~p 483 (698)
.+++|+.+|+||+.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.+++..+|
T Consensus 291 ~~~~p~~~G~G~~~i~~~~~~~-----~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p 365 (446)
T 4ene_A 291 GFVAPATSGGGFNLIPIATAGN-----FSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFP 365 (446)
T ss_dssp HHHCGGGSSCCSTHHHHHHTTC-----SCHHHHHHHHHHHHHHHHHHHTTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCG
T ss_pred HHHhHhhcCCcHHHHHHHHcCC-----chHHHHHHHHHHHHHHHHHHHccCCCcchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999998765 46677888899999999999999999999999999999999999999998877
Q ss_pred cCCCccccccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHhcChhhHHHHHHHHHHHHHHhhccccccchhhhhH
Q 005409 484 QSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETKV 563 (698)
Q Consensus 484 ~~~~~~~~~~~~~~~p~~~alvGaaA~la~v~~aPls~~vi~~Eltg~~~~llPlmiav~va~~v~~~~~~~~~~~~~~~ 563 (698)
. ...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++|+++++. +.++++||...
T Consensus 366 ~----------~~~~~~~~a~vGmaa~~a~~~~aPlt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~~-~~~~~iY~~~l 434 (446)
T 4ene_A 366 Q----------YHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQF-TGGKPLYSAIL 434 (446)
T ss_dssp G----------GTCCHHHHHHHHHTHHHHHHTCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHH-TTCCCHHHHHH
T ss_pred c----------cccCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHHH-hCCCChHHHHH
Confidence 5 235799999999999999999999999999999999999999999999999998764 67889999765
Q ss_pred h
Q 005409 564 A 564 (698)
Q Consensus 564 ~ 564 (698)
+
T Consensus 435 ~ 435 (446)
T 4ene_A 435 A 435 (446)
T ss_dssp H
T ss_pred H
Confidence 4
No 5
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.81 E-value=1.6e-19 Score=209.24 Aligned_cols=189 Identities=16% Similarity=0.108 Sum_probs=143.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CchhHHHHHHHHHHHHHH-HHhhccccCcHHHHHHHH
Q 005409 349 ELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNG-----IPKAVFPVMGGLAVGLIA-LMFPEILYWGFENVDILL 422 (698)
Q Consensus 349 ~l~~~illGil~Gl~g~lf~~~~~~~~~~~~~~~~~~~-----~~~~~~~~lggllvg~i~-~~~P~~~g~G~~~i~~ll 422 (698)
.+.+.+++|++.|+++.+|..++.++.+.++.+..... ..+.+.|++++++++.+. ++.|+.-|+|.++++..+
T Consensus 10 ~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGIp~v~~~l 89 (632)
T 3org_A 10 LVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRLAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAEGSGLPQMKSIL 89 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCBCSHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHH
Confidence 35567899999999999999998887776543322111 112345677777777665 678999999999998887
Q ss_pred ccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHhhHHHHHHHH--HHHHhhhcCCCccccccccccchH
Q 005409 423 ESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGK--FINFAIAQSNPTIHFSILEVASPQ 500 (698)
Q Consensus 423 ~~~~~~~~~s~~~l~~~~~~K~l~t~lt~gsG~~GG~f~Psl~iGA~~G~~~g~--~~~~~~p~~~~~~~~~~~~~~~p~ 500 (698)
++.. +......-...++.|++.+.+++|+|++.|.++|++++||++|..+++ .++....+ ..+..
T Consensus 90 ~g~~--~~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~~~f~~~~~~-----------~~~~r 156 (632)
T 3org_A 90 SGFY--DKMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRLGVFKELCTD-----------RALRL 156 (632)
T ss_dssp TTTH--HHHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTSHHHHHHHHS-----------HHHHH
T ss_pred hCcc--ccccccccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhhhhhccccCC-----------HHHHH
Confidence 7641 000111234567889999999999999999999999999999998887 66532111 12456
Q ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHhcC---hhhHHHHHHHHHHHHHHhh
Q 005409 501 AYGLVGMAATLAGVCQVPLTSVLLLFELTQD---YRIVLPLLGAVGLSSWFTS 550 (698)
Q Consensus 501 ~~alvGaaA~la~v~~aPls~~vi~~Eltg~---~~~llPlmiav~va~~v~~ 550 (698)
.+..+|+||.+|++++||++++++.+|.... ...+.|.++++++++.+.+
T Consensus 157 ~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~ 209 (632)
T 3org_A 157 QTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYE 209 (632)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999998753 3567899999888887765
No 6
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=99.61 E-value=6.6e-15 Score=164.24 Aligned_cols=193 Identities=16% Similarity=0.174 Sum_probs=148.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---Cchh----HHHHHHHHHHHHHHH-HhhccccCcHHHHH
Q 005409 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNG---IPKA----VFPVMGGLAVGLIAL-MFPEILYWGFENVD 419 (698)
Q Consensus 348 ~~l~~~illGil~Gl~g~lf~~~~~~~~~~~~~~~~~~~---~~~~----~~~~lggllvg~i~~-~~P~~~g~G~~~i~ 419 (698)
..+...+++|+++|+++.+|..+++++.+.+........ .+.| +.+++++++++.+.. +.|+.-|+|.+++.
T Consensus 34 ~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~~~p~a~GsGip~v~ 113 (465)
T 1ots_A 34 AILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIE 113 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhCccccCCChHHHH
Confidence 345677899999999999999999988876655433211 1112 234555666666554 67999999999998
Q ss_pred HHHccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHhhHHHHHHHHHHHHhhhcCCCccccccccccch
Q 005409 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (698)
Q Consensus 420 ~ll~~~~~~~~~s~~~l~~~~~~K~l~t~lt~gsG~~GG~f~Psl~iGA~~G~~~g~~~~~~~p~~~~~~~~~~~~~~~p 499 (698)
..+++.. +.. .....+.|++.+.+++++|.|.|.++|++++||++|..+++.++. . +..+.
T Consensus 114 ~~l~~~~---~~~---~~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig~~l~~~~~l---~----------~~~~~ 174 (465)
T 1ots_A 114 GALEDQR---PVR---WWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL---K----------GDEAR 174 (465)
T ss_dssp HHHTTCS---CCC---HHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC---C----------SHHHH
T ss_pred HHHhCCC---CCC---cHHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHHHHHhcc---C----------CHHHH
Confidence 8887642 122 145678899999999999999999999999999999999997642 0 12356
Q ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHh-cChh--h--HHHHHHHHHHHHHHhhccccccchh
Q 005409 500 QAYGLVGMAATLAGVCQVPLTSVLLLFELT-QDYR--I--VLPLLGAVGLSSWFTSGQMRRRDVK 559 (698)
Q Consensus 500 ~~~alvGaaA~la~v~~aPls~~vi~~Elt-g~~~--~--llPlmiav~va~~v~~~~~~~~~~~ 559 (698)
..+..+|+||.+++++++|++++++.+|.. ++++ . +.|.++++++++++++.+.++++.|
T Consensus 175 r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~G~~~~f 239 (465)
T 1ots_A 175 HTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALI 239 (465)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHHHHHHSCSCCSS
T ss_pred HHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCCcee
Confidence 789999999999999999999999999976 4433 5 8999999999998887655555544
No 7
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=99.59 E-value=1.4e-14 Score=161.28 Aligned_cols=193 Identities=17% Similarity=0.220 Sum_probs=144.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCchhHHHH-HHH---HHHHHHH-HHhhccccCcHHHHH
Q 005409 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDN---GIPKAVFPV-MGG---LAVGLIA-LMFPEILYWGFENVD 419 (698)
Q Consensus 348 ~~l~~~illGil~Gl~g~lf~~~~~~~~~~~~~~~~~~---~~~~~~~~~-lgg---llvg~i~-~~~P~~~g~G~~~i~ 419 (698)
..+...+++|+++|+++.+|..+++++++.+....... ++..|+.++ +++ ++.+.+. .+.|+.-|+|.++++
T Consensus 30 ~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~~p~a~GsGIp~v~ 109 (466)
T 3nd0_A 30 RTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLAWLVTALISGGMVALSFWLMKRFAPDTSGSGIPQIE 109 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCTHHHHHHHHHHHHHHHHHHHHHTTTCGGGSBCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCCCCHHHHH
Confidence 34566789999999999999999999887765543221 222233333 222 2222222 345889999999998
Q ss_pred HHHccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHhhHHHHHHHHHHHHhhhcCCCccccccccccch
Q 005409 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (698)
Q Consensus 420 ~ll~~~~~~~~~s~~~l~~~~~~K~l~t~lt~gsG~~GG~f~Psl~iGA~~G~~~g~~~~~~~p~~~~~~~~~~~~~~~p 499 (698)
..+++.. +.. .......|++.+.+|+++|.|.|.++|++++||++|..+++.++. +..+.
T Consensus 110 ~~l~g~~---~~~---~~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~~~~~--------------~~~~~ 169 (466)
T 3nd0_A 110 GHLEGKL---PLV---WQRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKA--------------TQENQ 169 (466)
T ss_dssp HHTTSSS---CCC---HHHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHHHTTC--------------CHHHH
T ss_pred HHHcCCC---CCc---hHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHcCC--------------ChhHH
Confidence 8887642 122 134567899999999999999999999999999999999997653 12356
Q ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHh-cCh----hhHHHHHHHHHHHHHHhhccccccchhh
Q 005409 500 QAYGLVGMAATLAGVCQVPLTSVLLLFELT-QDY----RIVLPLLGAVGLSSWFTSGQMRRRDVKE 560 (698)
Q Consensus 500 ~~~alvGaaA~la~v~~aPls~~vi~~Elt-g~~----~~llPlmiav~va~~v~~~~~~~~~~~~ 560 (698)
..+..+|+||.+++++++|++++++.+|.. +++ ..+.|.++++++++.+++.+.++++.|+
T Consensus 170 r~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~g~~~~f~ 235 (466)
T 3nd0_A 170 RILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATIILRMIRGQSAIIS 235 (466)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHHHHHHHHHHTCSSCSSC
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHHcCCCCcee
Confidence 889999999999999999999999999975 444 2367999999999998877665555443
No 8
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=99.58 E-value=3.8e-14 Score=157.25 Aligned_cols=192 Identities=15% Similarity=0.161 Sum_probs=144.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchh-HH--H----HHHHHHHHHHH-HHhhccccCcHHHHH
Q 005409 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKA-VF--P----VMGGLAVGLIA-LMFPEILYWGFENVD 419 (698)
Q Consensus 348 ~~l~~~illGil~Gl~g~lf~~~~~~~~~~~~~~~~~~~~~~~-~~--~----~lggllvg~i~-~~~P~~~g~G~~~i~ 419 (698)
..+...+++|+++|+++.+|..+++++++.+...........+ .+ + .+++++++.+. .+.|+.-|+|.++++
T Consensus 19 ~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGip~v~ 98 (446)
T 4ene_A 19 AILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIE 98 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 4456788999999999999999999988876554332222211 11 1 12334444443 346999999999988
Q ss_pred HHHccCCCCccccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHhhHHHHHHHHHHHHhhhcCCCccccccccccch
Q 005409 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (698)
Q Consensus 420 ~ll~~~~~~~~~s~~~l~~~~~~K~l~t~lt~gsG~~GG~f~Psl~iGA~~G~~~g~~~~~~~p~~~~~~~~~~~~~~~p 499 (698)
..+++.. .... ......|++.+.+|+++|.|.|.++|++++||++|..+++.++. +..+.
T Consensus 99 ~~l~~~~---~~~~---~r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~~~~~--------------~~~~~ 158 (446)
T 4ene_A 99 GALEDQR---PVRW---WRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL--------------KGDEA 158 (446)
T ss_dssp HHHHTCS---CCCH---HHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC--------------CSHHH
T ss_pred HHHhCCC---ccch---HHHHHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHHHcCC--------------CHHHH
Confidence 8887641 2221 34567899999999999999999999999999999999987652 12344
Q ss_pred H-HHHHHHHHHHHHHhhcchHHHHHHHHHHhc-Ch----hhHHHHHHHHHHHHHHhhccccccchh
Q 005409 500 Q-AYGLVGMAATLAGVCQVPLTSVLLLFELTQ-DY----RIVLPLLGAVGLSSWFTSGQMRRRDVK 559 (698)
Q Consensus 500 ~-~~alvGaaA~la~v~~aPls~~vi~~Eltg-~~----~~llPlmiav~va~~v~~~~~~~~~~~ 559 (698)
. .+..+|+||.+++++++|++++++.+|... ++ ..+.|.++++++++.+++.+.++++.|
T Consensus 159 r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~g~~~~~ 224 (446)
T 4ene_A 159 RHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALI 224 (446)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHHHHHHHHHTTTTCCSC
T ss_pred HHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHcCCCcee
Confidence 4 889999999999999999999999999764 32 358999999999999887665555444
No 9
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.55 E-value=6.7e-08 Score=92.40 Aligned_cols=60 Identities=27% Similarity=0.362 Sum_probs=56.2
Q ss_pred hhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHH
Q 005409 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEF 679 (698)
Q Consensus 620 ~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~ 679 (698)
...+++|+|+|+++++++++++++.||++.|.+++++.+||+|++|+++|+||.+|+.+.
T Consensus 14 ~l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~ 73 (170)
T 4esy_A 14 AIRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRG 73 (170)
T ss_dssp HHHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGG
T ss_pred HHcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999753
No 10
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.47 E-value=3.6e-07 Score=84.91 Aligned_cols=63 Identities=11% Similarity=0.148 Sum_probs=57.8
Q ss_pred hccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccC-CeEEEEEeHHHHHHHHHHh
Q 005409 621 KRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 621 ~~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dl~~~l~~~ 683 (698)
+...+++|+|++ +++++++++++.|+++.|.+++++.+||+|++ ++++|+||.+|+.+.+...
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 85 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINE 85 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHH
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcC
Confidence 467889999998 99999999999999999999999999999987 8999999999999886544
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.45 E-value=2.6e-07 Score=84.02 Aligned_cols=73 Identities=23% Similarity=0.218 Sum_probs=60.5
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
++.+|+.....+.....+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 56 vt~~dl~~~~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 56 VHRLELFKMQQSGSGQKQLGAVM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp CCHHHHHHHHHTTTTTSBHHHHS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred EEHHHHHHHHhcCCCcCCHHHHh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 45566643333333467899999 46889999999999999999999999999998899999999999998763
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.44 E-value=3.2e-07 Score=82.99 Aligned_cols=72 Identities=22% Similarity=0.209 Sum_probs=59.2
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHH
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l 680 (698)
++.+|+.....+.....+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+
T Consensus 53 vt~~dl~~~~~~~~~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 53 LMAKDLLPFMRSDAEAFSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp EEGGGGGGGGSTTCCCCCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred EEHHHHHHHHhccCCCCCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 4555654332223356789999965 78999999999999999999999999999899999999999998764
No 13
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.42 E-value=4.7e-07 Score=83.31 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=59.4
Q ss_pred cccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCC--eEEEEEeHHHHHHHHHHhhhhccCcccc
Q 005409 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN--ILIGLLTLGDIEEFSKYAQAKTSRSKNV 693 (698)
Q Consensus 623 ~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g--~lvGiVt~~dl~~~l~~~~~~~~~v~ev 693 (698)
.++++|+|.+++.++++++++.|+++.|.+++.+.+||+|+++ +++|+||.+|+.+.+......+.++.++
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~ 76 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPI 76 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGG
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHH
Confidence 4689999999999999999999999999999999999999887 9999999999998765433223344443
No 14
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.41 E-value=1.6e-07 Score=85.04 Aligned_cols=58 Identities=19% Similarity=0.132 Sum_probs=55.2
Q ss_pred ccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 624 i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 68 ~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 68 EKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 6799999999999999999999999999999999999998999999999999999875
No 15
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.40 E-value=6.2e-07 Score=81.43 Aligned_cols=61 Identities=23% Similarity=0.305 Sum_probs=56.0
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
++.+++|+|.+++.++++++++.|+++.|.+++.+.+||+| +++++|+||.+|+.+.+...
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~ 62 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKG 62 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcC
Confidence 45789999999999999999999999999999999999999 89999999999999877644
No 16
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.40 E-value=4.1e-07 Score=81.26 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=55.3
Q ss_pred cccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 623 ~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 61 ~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 61 KKTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp CCBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred ccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 34899999999999999999999999999999999999998899999999999998765
No 17
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.39 E-value=2.3e-07 Score=84.02 Aligned_cols=59 Identities=22% Similarity=0.269 Sum_probs=55.2
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
.+++++++|+++++++++++++.|+++.|.+++.+.+||+|+ ++++|+||.+|+.+...
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~ 61 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRK 61 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCS
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHh
Confidence 467899999999999999999999999999999999999998 99999999999997654
No 18
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.39 E-value=5.6e-07 Score=91.96 Aligned_cols=63 Identities=19% Similarity=0.249 Sum_probs=57.5
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccC--CeEEEEEeHHHHHHHHHHh
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND--NILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~--g~lvGiVt~~dl~~~l~~~ 683 (698)
...++|+|+|+++++++.+++++.++.++|.+++++.+||||++ ++++|+||++||++++...
T Consensus 10 ~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 10 KYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp CSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred cCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHh
Confidence 45778999999999999999999999999999999999999974 6899999999999987644
No 19
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.37 E-value=6.4e-07 Score=83.20 Aligned_cols=72 Identities=21% Similarity=0.195 Sum_probs=60.0
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
++.+|+.....+. ...+++++| ++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 73 vt~~dl~~~~~~~-~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 73 VHIRDLYNQKINE-NKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp EEHHHHHHHHHHH-SCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred EEHHHHHHHHhcC-CCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 4455654322111 267899999 88999999999999999999999999999999899999999999998764
No 20
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.36 E-value=4.9e-07 Score=82.68 Aligned_cols=58 Identities=21% Similarity=0.304 Sum_probs=53.9
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE 678 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~ 678 (698)
+...+++|+|+++++++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+
T Consensus 4 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 61 (138)
T 2yzi_A 4 DMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIR 61 (138)
T ss_dssp CTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred hhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHH
Confidence 3567899999999999999999999999999999999999998899999999999963
No 21
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.36 E-value=2.2e-07 Score=88.78 Aligned_cols=60 Identities=20% Similarity=0.178 Sum_probs=55.5
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
....+++++|+++++++++++++.++++.|.+++.+++||+| +|+++|+||++|+.+++.
T Consensus 102 ~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 102 GRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp HTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSC
T ss_pred ccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 456789999999999999999999999999999999999998 599999999999988754
No 22
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.35 E-value=3.6e-07 Score=83.49 Aligned_cols=61 Identities=28% Similarity=0.390 Sum_probs=56.0
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHH-HHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDI-EEFSK 681 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl-~~~l~ 681 (698)
+.+.+++|+|++++.++++++++.|+++.|.+++.+.+||+|++++++|+||++|+ .+.+.
T Consensus 5 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 5 LKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTT
T ss_pred cccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 45678999999999999999999999999999999999999988999999999999 77654
No 23
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.34 E-value=7.7e-07 Score=84.42 Aligned_cols=65 Identities=22% Similarity=0.233 Sum_probs=58.8
Q ss_pred hhhccccchhcccc---CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 619 ELKRRVFVSEVMRT---RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 619 ~~~~~i~v~dvM~~---~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
..+..++|+|+|++ +++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+...
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhc
Confidence 34667899999996 799999999999999999999999999999889999999999999877654
No 24
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.34 E-value=1.2e-06 Score=79.56 Aligned_cols=71 Identities=20% Similarity=0.177 Sum_probs=57.9
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
++.+|+..... ....+++++|++ ++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 55 vt~~dl~~~~~--~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 55 LLAKDLLRYML--EPALDIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp EEGGGGGGGGT--CTTSCGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred EEHHHHHhHhc--cCCcCHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 45556533221 246789999964 889999999999999999999999999998899999999999998764
No 25
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.33 E-value=9.1e-07 Score=81.15 Aligned_cols=73 Identities=21% Similarity=0.120 Sum_probs=59.2
Q ss_pred cccccchhhhh-hhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 608 LCIDDWNLEVE-ELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 608 l~~~d~~~~~~-~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
++..|+..... ......+++++|++ ++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 53 vt~~dl~~~~~~~~~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 53 LLAKDLLPLILKADGDSDDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp EEGGGGGGGGGSSSGGGCCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred EEHHHHHHHHHhccCCCcCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 44555543221 22356789999976 899999999999999999999999999999899999999999997654
No 26
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.33 E-value=9.1e-07 Score=87.62 Aligned_cols=64 Identities=14% Similarity=0.150 Sum_probs=59.0
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhhh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA 685 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~~ 685 (698)
...+++++|+++++++++++++.++++.|.+++.+.+||||++|+++|+||++|+.+.+.+...
T Consensus 114 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~~ 177 (205)
T 3kxr_A 114 PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHYE 177 (205)
T ss_dssp TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHHC
T ss_pred CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999999999999999998875543
No 27
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.33 E-value=5.3e-07 Score=83.95 Aligned_cols=60 Identities=25% Similarity=0.322 Sum_probs=55.9
Q ss_pred cccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 623 ~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
.++++|+|++ +++++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+.+..
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc
Confidence 3689999999 99999999999999999999999999999988999999999999987653
No 28
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.32 E-value=3.2e-07 Score=84.25 Aligned_cols=59 Identities=15% Similarity=0.232 Sum_probs=53.6
Q ss_pred cccchhccc--cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccC-CeEEEEEeHHHHHHHHH
Q 005409 623 RVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSK 681 (698)
Q Consensus 623 ~i~v~dvM~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dl~~~l~ 681 (698)
+.+++|+|+ ++++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+.+.
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~ 63 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLIL 63 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGG
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHH
Confidence 467999999 678999999999999999999999999999987 79999999999998754
No 29
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.32 E-value=5.5e-07 Score=81.99 Aligned_cols=58 Identities=22% Similarity=0.190 Sum_probs=53.3
Q ss_pred cccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 623 ~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
..+++++| ++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 69 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 69 KEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp HHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 35689999 77899999999999999999999999999998899999999999998764
No 30
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.32 E-value=7.4e-07 Score=82.50 Aligned_cols=62 Identities=24% Similarity=0.313 Sum_probs=56.7
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
...+++++|.++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+...
T Consensus 83 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 83 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp -CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC-
T ss_pred ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 45789999999999999999999999999999999999999889999999999999987643
No 31
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.31 E-value=1.1e-06 Score=84.18 Aligned_cols=72 Identities=18% Similarity=0.144 Sum_probs=60.6
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
++..|+.....+ ....+++++| ++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 92 vt~~dl~~~~~~-~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~ 163 (172)
T 3lhh_A 92 ISAKQLLSESIA-GERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALT 163 (172)
T ss_dssp EEHHHHHHHHHT-TCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred EEHHHHHHHHhh-cCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 445565432222 1367899999 99999999999999999999999999999998899999999999998875
No 32
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.31 E-value=8.5e-07 Score=79.40 Aligned_cols=58 Identities=22% Similarity=0.285 Sum_probs=53.4
Q ss_pred ccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 624 i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
++++|+|+++++++++++++.|+++.|.+++.+.+||+| +++++|+||.+|+.+.+..
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~ 58 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAE 58 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhc
Confidence 468999999999999999999999999999999999999 8999999999999987654
No 33
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.30 E-value=9.7e-07 Score=82.60 Aligned_cols=72 Identities=18% Similarity=0.127 Sum_probs=60.3
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
++..|+...... ....+++++| ++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 71 vt~~dl~~~~~~-~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 71 AYNYDIVRQARI-DDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELF 142 (153)
T ss_dssp EEHHHHHHHHHH-HTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHH
T ss_pred EEHHHHHhHHhc-CCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 445555332111 1367899999 89999999999999999999999999999998899999999999998875
No 34
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.30 E-value=7.5e-07 Score=79.49 Aligned_cols=58 Identities=21% Similarity=0.315 Sum_probs=54.6
Q ss_pred cchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 625 FVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 625 ~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
+++|+|++++.++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+.+..
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~ 59 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ 59 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 6899999999999999999999999999999999999988999999999999987654
No 35
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.29 E-value=1.2e-06 Score=79.55 Aligned_cols=62 Identities=21% Similarity=0.228 Sum_probs=57.2
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+...
T Consensus 65 ~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 65 LETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp TTCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred cccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999889999999999999987643
No 36
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.28 E-value=1.1e-06 Score=84.11 Aligned_cols=62 Identities=29% Similarity=0.304 Sum_probs=57.5
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
...+++++|+++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+...
T Consensus 96 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~ 157 (180)
T 3sl7_A 96 YGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQI 157 (180)
T ss_dssp TTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred ccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999889999999999999987643
No 37
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.28 E-value=4.8e-07 Score=82.20 Aligned_cols=62 Identities=18% Similarity=0.154 Sum_probs=53.1
Q ss_pred hccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccC-CeEEEEEeHHHHHHHHHH
Q 005409 621 KRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 621 ~~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dl~~~l~~ 682 (698)
+.+.+++|+|++ +++++++++++.|+++.|.+++++.+||+|++ ++++|+||.+|+.+....
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~ 67 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQS 67 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHT
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhc
Confidence 456789999995 56689999999999999999999999999987 899999999999988754
No 38
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.27 E-value=8.3e-07 Score=82.46 Aligned_cols=63 Identities=21% Similarity=0.212 Sum_probs=57.4
Q ss_pred hhhccccchhccc--cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 619 ELKRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 619 ~~~~~i~v~dvM~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
+.+..++++|+|+ ++++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+.
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 74 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGIL 74 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTB
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 4466789999999 46999999999999999999999999999998999999999999998763
No 39
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.26 E-value=1.3e-06 Score=82.34 Aligned_cols=62 Identities=21% Similarity=0.337 Sum_probs=56.6
Q ss_pred hhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHH
Q 005409 618 EELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (698)
Q Consensus 618 ~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l 680 (698)
.+.+..++|+|+|++ ++++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+.+
T Consensus 11 ~~~l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 72 (159)
T 3fv6_A 11 ADKLKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRAS 72 (159)
T ss_dssp HHHHTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred HHHHhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHh
Confidence 455678899999987 56999999999999999999999999999889999999999999876
No 40
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.25 E-value=2.2e-06 Score=68.87 Aligned_cols=49 Identities=14% Similarity=0.224 Sum_probs=44.6
Q ss_pred CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 633 RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 633 ~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
++.++++++++.|+++.|.+++.+.+||+|+ ++++|+||.+|+.+.+..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVA 49 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 3578999999999999999999999999997 999999999999987643
No 41
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.25 E-value=1.4e-06 Score=83.33 Aligned_cols=62 Identities=15% Similarity=0.136 Sum_probs=54.4
Q ss_pred hccccchhccc--cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccC-CeEEEEEeHHHHHHHHHH
Q 005409 621 KRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 621 ~~~i~v~dvM~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dl~~~l~~ 682 (698)
+...+|+|+|+ ++++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+....
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~ 103 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIA 103 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHT
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhh
Confidence 55788999999 788999999999999999999999999999987 899999999999988753
No 42
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.25 E-value=1e-06 Score=83.23 Aligned_cols=61 Identities=20% Similarity=0.219 Sum_probs=54.4
Q ss_pred hhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 620 ~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
.....+++++|.++++++++++++.++++.|.++ +.+||||++|+++|+||++|+.+.+..
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~--~~lpVVd~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDE--SFLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTS--SEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHc--CCeEEEecCCEEEEEEEHHHHHHHHHH
Confidence 3457889999999999999999999999999765 459999999999999999999998753
No 43
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.25 E-value=1.5e-06 Score=81.95 Aligned_cols=64 Identities=9% Similarity=0.143 Sum_probs=58.5
Q ss_pred hccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCC---eEEEEEeHHHHHHHHHHhh
Q 005409 621 KRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN---ILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 621 ~~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g---~lvGiVt~~dl~~~l~~~~ 684 (698)
....+++++|.+ +++++++++++.++++.|.+++.+.+||+|++| +++|+||++|+.+.+.+..
T Consensus 78 ~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~~ 146 (159)
T 3fv6_A 78 LTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLS 146 (159)
T ss_dssp TTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHHH
T ss_pred ccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHHh
Confidence 356789999998 899999999999999999999999999999888 9999999999999887544
No 44
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.24 E-value=1.4e-06 Score=82.22 Aligned_cols=61 Identities=25% Similarity=0.288 Sum_probs=56.0
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
....+++++|.++++++++++++.++++.|.+++.+.+||+|+ |+++|+||++|+.+.+..
T Consensus 75 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 75 AFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp -CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred hcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999997 999999999999987654
No 45
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.24 E-value=1.7e-06 Score=78.82 Aligned_cols=61 Identities=21% Similarity=0.309 Sum_probs=56.3
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
....+++|+|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||++|+.+.+.+
T Consensus 71 ~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 71 VKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp GGGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred cccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 356789999999999999999999999999999999999999 7999999999999988753
No 46
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.23 E-value=2.5e-06 Score=79.18 Aligned_cols=61 Identities=18% Similarity=0.229 Sum_probs=55.2
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
....+++++|.++++++++++++.++++.|.+++. +||+|++|+++|+||++|+.+.+...
T Consensus 84 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 84 LEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp GGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred HhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHH
Confidence 35678999999999999999999999999988875 99999889999999999999987643
No 47
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.23 E-value=1.6e-06 Score=77.60 Aligned_cols=59 Identities=24% Similarity=0.245 Sum_probs=55.3
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||++|+.+.+.
T Consensus 63 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 63 AEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp TTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred cccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 467899999999999999999999999999999999999998 99999999999998764
No 48
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.22 E-value=1.6e-06 Score=79.48 Aligned_cols=61 Identities=21% Similarity=0.233 Sum_probs=54.2
Q ss_pred ccccchhcccc------CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 622 RRVFVSEVMRT------RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 622 ~~i~v~dvM~~------~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
...+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+..
T Consensus 75 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 75 LSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 36789999986 68899999999999999999999999999988999999999999988753
No 49
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.22 E-value=1.6e-06 Score=81.41 Aligned_cols=61 Identities=30% Similarity=0.164 Sum_probs=56.3
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
....+++++|.+ ++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.+
T Consensus 93 ~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 93 LIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp CSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 356789999999 9999999999999999999999999999988999999999999988763
No 50
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.21 E-value=1e-06 Score=89.18 Aligned_cols=62 Identities=19% Similarity=0.207 Sum_probs=51.8
Q ss_pred hhccccchhccc-cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 620 LKRRVFVSEVMR-TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 620 ~~~~i~v~dvM~-~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
.....+++|+|+ ++++++++++++.|+++.|.+++++.+||+|++|+++|+||++|+.+..+
T Consensus 181 ~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~~ 243 (245)
T 3l2b_A 181 IVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTHK 243 (245)
T ss_dssp GGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-------
T ss_pred HhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchhh
Confidence 345678999999 89999999999999999999999999999998999999999999987654
No 51
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.21 E-value=2.1e-06 Score=80.29 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=55.7
Q ss_pred hccccchhccc--cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 621 KRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 621 ~~~i~v~dvM~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
....+++|+|+ ++++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHh
Confidence 44567999999 689999999999999999999999999999988999999999999988764
No 52
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.21 E-value=2.1e-06 Score=80.05 Aligned_cols=59 Identities=15% Similarity=0.303 Sum_probs=54.4
Q ss_pred cccchhccc------cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 623 RVFVSEVMR------TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 623 ~i~v~dvM~------~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
..+++++|. ++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 567899997 78899999999999999999999999999998899999999999998753
No 53
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.21 E-value=1.8e-06 Score=81.50 Aligned_cols=60 Identities=27% Similarity=0.268 Sum_probs=55.7
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
..++|+|+|+++++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+.
T Consensus 3 ~~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 62 (160)
T 2o16_A 3 LMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQE 62 (160)
T ss_dssp CCCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CcCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Confidence 356899999999999999999999999999999999999998899999999999998764
No 54
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.21 E-value=2.8e-06 Score=69.09 Aligned_cols=47 Identities=15% Similarity=0.259 Sum_probs=42.6
Q ss_pred CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHH
Q 005409 633 RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (698)
Q Consensus 633 ~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l 680 (698)
+++++++++++.||++.|.+++.+++||+| +++++|+||.+|+.+.+
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKV 47 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHT
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 357899999999999999999999999998 58999999999997644
No 55
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.20 E-value=1.5e-06 Score=81.30 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=55.2
Q ss_pred hhccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 620 ~~~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
.+...+++|+|.+ +++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+.
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 70 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAIL 70 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSB
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 3567899999997 8999999999999999999999999999998899999999999988754
No 56
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.19 E-value=2.1e-06 Score=81.39 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=57.0
Q ss_pred hhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 620 ~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
.....+++++|.++++++++++++.++++.|.+++.+.+||+|+ |+++|+||++|+.+.+..
T Consensus 89 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 89 ASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp GGGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred ccccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999998 999999999999988653
No 57
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.18 E-value=2.3e-06 Score=86.63 Aligned_cols=59 Identities=17% Similarity=0.236 Sum_probs=55.8
Q ss_pred cccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 623 ~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
..+++|+|+++++++++++++.||++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~ 64 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYM 64 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 45799999999999999999999999999999999999998899999999999998875
No 58
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.18 E-value=2e-06 Score=78.47 Aligned_cols=60 Identities=23% Similarity=0.321 Sum_probs=55.0
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcC-----CCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEK-----QSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~-----~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
...+++++|.+++.++++++++.++++.|.+++ .+.+||+|++|+++|+||++|+.+.+.
T Consensus 71 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 71 LETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp SSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 467899999999999999999999999999999 999999998899999999999998765
No 59
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.18 E-value=1e-06 Score=79.58 Aligned_cols=59 Identities=22% Similarity=0.343 Sum_probs=53.2
Q ss_pred cccchhccccC--ceEEcCCCCHHHHHHHHHHcCCCEEEEEccC-CeEEEEEeHHHHHHHHH
Q 005409 623 RVFVSEVMRTR--YVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSK 681 (698)
Q Consensus 623 ~i~v~dvM~~~--~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dl~~~l~ 681 (698)
+.+++|+|+++ ++++++++++.|+++.|.+++.+.+||+|++ ++++|+||.+|+.+.+.
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~ 63 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMR 63 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGS
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh
Confidence 46799999954 9999999999999999999999999999987 89999999999987653
No 60
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.18 E-value=1.7e-06 Score=81.65 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=53.6
Q ss_pred ccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 624 VFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 624 i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
.+++++|++ ++.++.+++++.+|++.|.+++++++||+|++++++|+||.+|+.+.+...
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~ 76 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEH 76 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHH
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhc
Confidence 468899985 789999999999999999999999999999889999999999999876543
No 61
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.18 E-value=1.3e-06 Score=79.20 Aligned_cols=60 Identities=18% Similarity=0.281 Sum_probs=54.0
Q ss_pred ccccchhccc--cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccC-CeEEEEEeHHHHHHHHH
Q 005409 622 RRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSK 681 (698)
Q Consensus 622 ~~i~v~dvM~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dl~~~l~ 681 (698)
.+.+++|+|+ ++++++++++++.|+++.|.+++.+.+||+|++ ++++|+||.+|+.+...
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~ 65 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML 65 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc
Confidence 4578999999 678999999999999999999999999999986 89999999999987653
No 62
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.18 E-value=2.5e-06 Score=78.41 Aligned_cols=59 Identities=12% Similarity=0.071 Sum_probs=54.5
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
...+++++|.+++++++++ ++.++++.|.+++.+.+||+|++|+++|+||++|+.+...
T Consensus 69 ~~~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 69 LDGPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp TTSBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred CCCCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 3578999999999999999 9999999999999999999998899999999999987554
No 63
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.17 E-value=3.2e-06 Score=84.04 Aligned_cols=60 Identities=22% Similarity=0.137 Sum_probs=56.2
Q ss_pred cccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 623 ~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
+.+++|+|+++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+..
T Consensus 71 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 71 DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 567999999999999999999999999999999999999988999999999999987764
No 64
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.17 E-value=2.7e-06 Score=79.98 Aligned_cols=68 Identities=21% Similarity=0.199 Sum_probs=56.2
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHH
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIE 677 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~ 677 (698)
++.+|+.....+. ...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.
T Consensus 88 vt~~dl~~~~~~~-~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 88 LHAKDLLKYMFNP-EQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp EEGGGGGGGSSCG-GGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred EEHHHHHHHHHcC-CcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 4556664321111 56789999965 88999999999999999999999999999999999999999984
No 65
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.17 E-value=1.8e-06 Score=80.67 Aligned_cols=63 Identities=25% Similarity=0.240 Sum_probs=56.2
Q ss_pred hccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEE-cc-CCeEEEEEeHHHHHHHHHHh
Q 005409 621 KRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIV-DN-DNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 621 ~~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVV-d~-~g~lvGiVt~~dl~~~l~~~ 683 (698)
+...+|+|+|++ +++++++++++.++++.|.+++.+.+||+ |+ +++++|+||.+|+.+.+...
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~ 83 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID 83 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC
Confidence 456789999996 89999999999999999999999999999 64 48999999999999876543
No 66
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.16 E-value=2.3e-06 Score=80.37 Aligned_cols=61 Identities=18% Similarity=0.105 Sum_probs=56.5
Q ss_pred hccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 621 KRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 621 ~~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
+...+++|+|.+ +++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+.
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 73 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIF 73 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHB
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhh
Confidence 456889999998 8999999999999999999999999999998899999999999998764
No 67
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.15 E-value=2.6e-06 Score=77.43 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=53.2
Q ss_pred ccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEcc-CCeEEEEEeHHHHHHHHHH
Q 005409 624 VFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDN-DNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 624 i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~-~g~lvGiVt~~dl~~~l~~ 682 (698)
++++|+|++ +++++++++++.|+++.|.+++++.+||+|+ +++++|+||.+|+.+....
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~ 63 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTE 63 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTS
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhc
Confidence 579999974 6899999999999999999999999999975 5899999999999987653
No 68
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.15 E-value=3.1e-06 Score=79.46 Aligned_cols=61 Identities=18% Similarity=0.253 Sum_probs=56.2
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEcc--CCeEEEEEeHHHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN--DNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~--~g~lvGiVt~~dl~~~l~ 681 (698)
...++++|+|+++++++++++++.|+++.|.+++.+.+||+|+ +++++|+||.+|+.+...
T Consensus 10 ~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 10 SHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred ccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHH
Confidence 3567899999999999999999999999999999999999996 789999999999998764
No 69
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.14 E-value=3.7e-06 Score=80.77 Aligned_cols=62 Identities=11% Similarity=0.116 Sum_probs=57.1
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~ 684 (698)
...+++++|.++++++++++++.++++.|.+++.+.+||+| +|+++|+||++|+.+.+....
T Consensus 106 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~~ 167 (185)
T 2j9l_A 106 PTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQMA 167 (185)
T ss_dssp CCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHC
T ss_pred cCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHhh
Confidence 46789999999999999999999999999999999999999 799999999999999887543
No 70
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.14 E-value=3.1e-06 Score=79.26 Aligned_cols=62 Identities=24% Similarity=0.308 Sum_probs=57.3
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~ 684 (698)
...+++++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||++|+.+.+....
T Consensus 76 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 76 KATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp SSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC
T ss_pred cccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999 799999999999999886443
No 71
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.12 E-value=4.3e-06 Score=76.26 Aligned_cols=60 Identities=23% Similarity=0.360 Sum_probs=55.8
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
...+++++|.+++.++++++++.++++.|.+++.+.+ |+|++|+++|+||++|+.+.+..
T Consensus 70 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~ 129 (138)
T 2yzi_A 70 YDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRR 129 (138)
T ss_dssp TTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHC
T ss_pred ccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHH
Confidence 4678999999999999999999999999999999999 99988999999999999998763
No 72
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.11 E-value=3.9e-06 Score=81.07 Aligned_cols=59 Identities=20% Similarity=0.235 Sum_probs=55.0
Q ss_pred cccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 623 ~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
.++++|+|+++++++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+.+.
T Consensus 8 ~~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 8 FMRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp CCBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTG
T ss_pred ccCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Confidence 37899999999999999999999999999999999999998899999999999988654
No 73
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.11 E-value=1.1e-06 Score=82.54 Aligned_cols=62 Identities=15% Similarity=0.162 Sum_probs=55.9
Q ss_pred hhccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCC-eEEEEEeHHHHHHHHH
Q 005409 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN-ILIGLLTLGDIEEFSK 681 (698)
Q Consensus 620 ~~~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g-~lvGiVt~~dl~~~l~ 681 (698)
.+...+|+|+|++ +++++++++++.++++.|.+++++.+||+|+++ +++|+||.+|+.+...
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~ 98 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMF 98 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSS
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHH
Confidence 3567899999997 789999999999999999999999999999874 9999999999987643
No 74
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.11 E-value=5.4e-06 Score=77.39 Aligned_cols=60 Identities=17% Similarity=0.260 Sum_probs=54.8
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
...+++++|.++++++++++++.++++.|.+++. +||+|++|+++|+||++|+.+.+...
T Consensus 81 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 81 ETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp GTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHT
T ss_pred cCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 4678999999999999999999999999998876 99999889999999999999987643
No 75
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.10 E-value=2.6e-06 Score=77.30 Aligned_cols=57 Identities=23% Similarity=0.178 Sum_probs=52.3
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE 678 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~ 678 (698)
...+++|+|.++++++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+
T Consensus 6 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 6 TMTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVI 62 (133)
T ss_dssp --CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHH
T ss_pred hhcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHH
Confidence 456899999999999999999999999999999999999998899999999999983
No 76
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.10 E-value=2.8e-06 Score=77.05 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=54.0
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l 680 (698)
...+++++|.++++++++++++.++++.|.+++.+.+||+|+ |+++|+||++|+.+.+
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 72 NTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred cccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 457899999999999999999999999999999999999997 9999999999998764
No 77
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.10 E-value=2.6e-06 Score=82.34 Aligned_cols=61 Identities=18% Similarity=0.244 Sum_probs=56.1
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
....+++++|.++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 72 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 PDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred cccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 3567899999999999999999999999999999999999998899999999999987554
No 78
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.09 E-value=4e-06 Score=77.46 Aligned_cols=58 Identities=28% Similarity=0.284 Sum_probs=53.8
Q ss_pred ccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHH
Q 005409 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEF 679 (698)
Q Consensus 622 ~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~ 679 (698)
..++++|+|++ +++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~ 62 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLAL 62 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTC
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHh
Confidence 45789999998 89999999999999999999999999999988999999999999753
No 79
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.09 E-value=4.3e-06 Score=80.28 Aligned_cols=64 Identities=19% Similarity=0.234 Sum_probs=56.2
Q ss_pred hhhccccchhccccC----ceEE--cCCCCHHHHHHHHHHcCCCEEEEE--ccCCeEEEEEeHHHHHHHHHH
Q 005409 619 ELKRRVFVSEVMRTR----YVTV--LMTTLLIEALTLMLAEKQSCAMIV--DNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 619 ~~~~~i~v~dvM~~~----~~~v--~~~~~l~eal~~m~~~~~~~lpVV--d~~g~lvGiVt~~dl~~~l~~ 682 (698)
+.....+++|+|+++ ++++ ++++++.++++.|.+++.+.+||+ |++++++|+||.+|+.+.+..
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~ 77 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIEN 77 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHH
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 345678999999987 7888 999999999999999999999999 778999999999999987754
No 80
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.08 E-value=5.9e-06 Score=79.34 Aligned_cols=63 Identities=11% Similarity=-0.011 Sum_probs=56.6
Q ss_pred hhccccchhccc--cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccC-CeEEEEEeHHHHHHHHHH
Q 005409 620 LKRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 620 ~~~~i~v~dvM~--~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dl~~~l~~ 682 (698)
.+...+|+|+|+ ++++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+....
T Consensus 32 ~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~ 97 (173)
T 3ocm_A 32 TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLIT 97 (173)
T ss_dssp HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHH
T ss_pred ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhc
Confidence 356789999997 468999999999999999999999999999976 899999999999987653
No 81
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.07 E-value=2.1e-06 Score=88.17 Aligned_cols=60 Identities=17% Similarity=0.090 Sum_probs=55.9
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
...+++++|+++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 219 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~ 278 (282)
T 2yzq_A 219 PNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLV 278 (282)
T ss_dssp CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGC
T ss_pred ccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHH
Confidence 467899999999999999999999999999999999999998889999999999987654
No 82
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.07 E-value=4.2e-06 Score=78.25 Aligned_cols=59 Identities=19% Similarity=0.203 Sum_probs=54.0
Q ss_pred cccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 623 ~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
..+++++|.++++++++++++.++++.|.+++ .+||+|++|+++|+||++|+.+.+...
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 85 DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHH
T ss_pred cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 67899999999999999999999999997765 799999889999999999999988643
No 83
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.07 E-value=4.5e-06 Score=78.28 Aligned_cols=61 Identities=13% Similarity=0.175 Sum_probs=56.0
Q ss_pred hhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCE-EEEEccCCeEEEEEeHHHHHHHHH
Q 005409 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSC-AMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 620 ~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~-lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
.....+++|+|+++++++++++++.|+++.|.+++.+. +||+|++ +++|+||.+|+.+.+.
T Consensus 12 ~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 12 HMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSG 73 (157)
T ss_dssp TCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHH
T ss_pred hhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHh
Confidence 34567899999999999999999999999999999999 9999987 9999999999998754
No 84
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.05 E-value=4.8e-06 Score=78.16 Aligned_cols=61 Identities=11% Similarity=0.202 Sum_probs=54.6
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
....+++++|.+++.++++++++.++++.|.+++. +||+|++|+++|+||++|+.+.+...
T Consensus 83 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~ 143 (159)
T 1yav_A 83 LDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKH 143 (159)
T ss_dssp TTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred hccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 35678999999999999999999999999987765 99999889999999999999987643
No 85
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.05 E-value=6.3e-06 Score=74.93 Aligned_cols=55 Identities=20% Similarity=0.305 Sum_probs=51.6
Q ss_pred ccchhccc---cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHH
Q 005409 624 VFVSEVMR---TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEF 679 (698)
Q Consensus 624 i~v~dvM~---~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~ 679 (698)
.+++|+|+ ++++++++++++.|+++.|.+++.+.+||+| +++++|+||.+|+.+.
T Consensus 6 ~~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~ 63 (135)
T 2rc3_A 6 KTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRK 63 (135)
T ss_dssp CBHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred eeHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHH
Confidence 38999999 8999999999999999999999999999998 7999999999999863
No 86
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.04 E-value=8.8e-06 Score=74.50 Aligned_cols=59 Identities=19% Similarity=0.343 Sum_probs=53.6
Q ss_pred cccchh---ccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 623 RVFVSE---VMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 623 ~i~v~d---vM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
+.++++ +|.++++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+.
T Consensus 7 ~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 68 (144)
T 2nyc_A 7 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIK 68 (144)
T ss_dssp GSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred hcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhc
Confidence 345677 88899999999999999999999999999999998899999999999998765
No 87
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.03 E-value=4.6e-06 Score=86.52 Aligned_cols=63 Identities=22% Similarity=0.223 Sum_probs=58.5
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~ 684 (698)
...+++++|+++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+....
T Consensus 225 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~ 287 (296)
T 3ddj_A 225 YGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHIL 287 (296)
T ss_dssp HTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHH
T ss_pred cCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999998899999999999999886543
No 88
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.02 E-value=6.9e-06 Score=85.53 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=58.4
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~ 684 (698)
...+++++|.++++++++++++.++++.|.+++.+.+||||++|+++|+||++|+.+.+....
T Consensus 199 ~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 199 DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999887544
No 89
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.00 E-value=1.1e-05 Score=75.81 Aligned_cols=61 Identities=10% Similarity=0.148 Sum_probs=55.1
Q ss_pred cccchhccccC------ceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhh
Q 005409 623 RVFVSEVMRTR------YVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 623 ~i~v~dvM~~~------~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~ 684 (698)
..+++++|.++ +.++++++++.++++.|.+++.+.+||+| +|+++|+||++|+.+.+....
T Consensus 83 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 83 QQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp CCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHH
T ss_pred cchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhh
Confidence 45799999887 78999999999999999999999999999 799999999999999876543
No 90
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.99 E-value=5.7e-06 Score=78.94 Aligned_cols=56 Identities=21% Similarity=0.279 Sum_probs=52.8
Q ss_pred cccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHH
Q 005409 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE 678 (698)
Q Consensus 623 ~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~ 678 (698)
.++++|+|++ +++++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~ 60 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLA 60 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHh
Confidence 4689999998 8999999999999999999999999999999899999999999985
No 91
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.98 E-value=6.7e-06 Score=85.14 Aligned_cols=62 Identities=26% Similarity=0.307 Sum_probs=56.1
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
...+++++|.++++++++++++.++++.|.+++.+.+||||++|+++|+||++|+.+.+...
T Consensus 197 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e 258 (278)
T 2yvy_A 197 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 258 (278)
T ss_dssp TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC---
T ss_pred CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999889999999999999887643
No 92
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=97.98 E-value=1.2e-05 Score=82.18 Aligned_cols=62 Identities=26% Similarity=0.240 Sum_probs=57.2
Q ss_pred cccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhh
Q 005409 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 623 ~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~ 684 (698)
+.+++++|.++++++++++++.|+++.|.+++.+.+||+|++++++|++|.+|+.+.+....
T Consensus 83 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~ 144 (280)
T 3kh5_A 83 NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKI 144 (280)
T ss_dssp TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGS
T ss_pred hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcC
Confidence 46899999999999999999999999999999999999999999999999999998876443
No 93
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.98 E-value=9e-06 Score=78.05 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=57.8
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
++.+|+.....+ ....+++ |.++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 86 vt~~Dl~~~~~~-~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~ 156 (173)
T 3ocm_A 86 GRAKDLVADLIT-EGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIA 156 (173)
T ss_dssp EEHHHHHHHHHH-HSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHH
T ss_pred EEHHHHHHHHhc-CCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHh
Confidence 455565432211 1356677 5678899999999999999999999999999998899999999999999875
No 94
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.97 E-value=6.3e-06 Score=76.56 Aligned_cols=56 Identities=27% Similarity=0.513 Sum_probs=52.2
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE 678 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~ 678 (698)
...+++++|.++++++++++++.++++.|.+++.+.+||+|++ +++|+||++|+.+
T Consensus 93 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 93 RDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp TTCBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred ccCcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 4678999999999999999999999999999999999999975 9999999999864
No 95
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=97.96 E-value=4.1e-06 Score=85.74 Aligned_cols=58 Identities=19% Similarity=0.298 Sum_probs=54.5
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEF 679 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~ 679 (698)
...+++++|+++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.++
T Consensus 221 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~ 278 (280)
T 3kh5_A 221 TNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKY 278 (280)
T ss_dssp HHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGG
T ss_pred hCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHh
Confidence 4578999999999999999999999999999999999999998899999999999865
No 96
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.96 E-value=9.3e-06 Score=75.65 Aligned_cols=62 Identities=15% Similarity=0.174 Sum_probs=54.9
Q ss_pred hhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 619 ELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 619 ~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
..+..++++++ ++++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+....
T Consensus 18 ~~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~ 79 (152)
T 2uv4_A 18 KSLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAE 79 (152)
T ss_dssp SBHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred hhHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcc
Confidence 34456778887 788999999999999999999999999999988999999999999987653
No 97
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.94 E-value=1.1e-05 Score=89.88 Aligned_cols=62 Identities=26% Similarity=0.307 Sum_probs=58.0
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
.+.+++|+|++++++++++++++|+++.|.+++.+.+||||++|+++|+||++|+.+.+.+.
T Consensus 217 ~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 217 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999987644
No 98
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.94 E-value=9.3e-06 Score=91.92 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=62.3
Q ss_pred hhccccchhccccCceEEcCC-CCHHHHHHHHHHcCCCEEEEEc-cCCeEEEEEeHHHHHHHHHHh-hhhccCcccc
Q 005409 620 LKRRVFVSEVMRTRYVTVLMT-TLLIEALTLMLAEKQSCAMIVD-NDNILIGLLTLGDIEEFSKYA-QAKTSRSKNV 693 (698)
Q Consensus 620 ~~~~i~v~dvM~~~~~~v~~~-~~l~eal~~m~~~~~~~lpVVd-~~g~lvGiVt~~dl~~~l~~~-~~~~~~v~ev 693 (698)
.+...+|+|+|++++++++++ +++.|+++.|.+++++.+||+| ++++++|+||.+|+++.+... ...+.++.++
T Consensus 380 ~l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~i 456 (527)
T 3pc3_A 380 WWWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKA 456 (527)
T ss_dssp TTTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGG
T ss_pred cccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHH
Confidence 356789999999999999999 9999999999999999999999 789999999999999877643 2223344443
No 99
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=97.91 E-value=1.4e-05 Score=82.90 Aligned_cols=74 Identities=22% Similarity=0.248 Sum_probs=62.6
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
++.+|+...........+++++|.++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.
T Consensus 140 vt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 140 VTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp EEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred EeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 44555543333334566899999999999999999999999999999999999998899999999999998876
No 100
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=97.90 E-value=1.9e-05 Score=82.91 Aligned_cols=61 Identities=21% Similarity=0.233 Sum_probs=56.5
Q ss_pred ccccchhcccc------CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 622 RRVFVSEVMRT------RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 622 ~~i~v~dvM~~------~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
...+++++|++ +++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+++..
T Consensus 254 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 254 LSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp TTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 36789999998 78999999999999999999999999999988999999999999998753
No 101
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.85 E-value=1.6e-05 Score=89.38 Aligned_cols=64 Identities=30% Similarity=0.424 Sum_probs=59.0
Q ss_pred hccccchhcccc-CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhh
Q 005409 621 KRRVFVSEVMRT-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 621 ~~~i~v~dvM~~-~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~ 684 (698)
..+.+++|+|++ +++++++++++.|+++.|.+++.+.+||||++|+++|+||++|+.+.+.+..
T Consensus 172 ~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~ 236 (511)
T 3usb_A 172 DYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPN 236 (511)
T ss_dssp CSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTT
T ss_pred cCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhccc
Confidence 356789999998 9999999999999999999999999999999999999999999999887543
No 102
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.80 E-value=3e-05 Score=79.14 Aligned_cols=58 Identities=17% Similarity=0.146 Sum_probs=52.4
Q ss_pred cccchh-ccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 623 RVFVSE-VMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 623 ~i~v~d-vM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
.+..++ +|++.++++.+++++.++.++|.+.+.+++||++ +|+++||||++|+++++.
T Consensus 187 ~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 187 VVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp BCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred eeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 334454 7999999999999999999999999999999997 699999999999999876
No 103
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.76 E-value=1.9e-05 Score=73.84 Aligned_cols=57 Identities=19% Similarity=0.311 Sum_probs=51.3
Q ss_pred ccchhccc------cCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 624 VFVSEVMR------TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 624 i~v~dvM~------~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
.+++|+|+ ++++++++++++.|+++.|.+++.+.+||+| +++++|+||.+|+.+.+.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~ 69 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVV 69 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSG
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHH
Confidence 47999999 5569999999999999999999999999965 799999999999998764
No 104
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.73 E-value=5.3e-05 Score=74.79 Aligned_cols=59 Identities=12% Similarity=0.078 Sum_probs=53.5
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHc---CCCEEEEEccCCeEEEEEeHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE---KQSCAMIVDNDNILIGLLTLGDIEEF 679 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~---~~~~lpVVd~~g~lvGiVt~~dl~~~ 679 (698)
....+++++|+++++++++++++.++++.|.+. +...+||+|++++++|+||.+|+...
T Consensus 51 ~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 112 (205)
T 3kxr_A 51 YSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH 112 (205)
T ss_dssp SCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS
T ss_pred CCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC
Confidence 356789999999999999999999999999886 67899999999999999999999753
No 105
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=97.69 E-value=4.9e-05 Score=80.13 Aligned_cols=61 Identities=23% Similarity=0.256 Sum_probs=56.1
Q ss_pred cccchhcccc------CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 623 RVFVSEVMRT------RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 623 ~i~v~dvM~~------~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
..+++++|++ +++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+...
T Consensus 250 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~ 316 (334)
T 2qrd_G 250 DLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYD 316 (334)
T ss_dssp GSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSC
T ss_pred cCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhc
Confidence 5689999984 899999999999999999999999999999889999999999999987643
No 106
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=97.69 E-value=6.1e-05 Score=79.32 Aligned_cols=61 Identities=15% Similarity=0.261 Sum_probs=55.3
Q ss_pred cccchhcc------ccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 623 RVFVSEVM------RTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 623 ~i~v~dvM------~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
..+++++| .++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+.+.
T Consensus 258 ~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 258 DVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp SSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSS
T ss_pred cCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhh
Confidence 46788888 47899999999999999999999999999999889999999999999987643
No 107
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.66 E-value=6.8e-06 Score=90.85 Aligned_cols=73 Identities=23% Similarity=0.238 Sum_probs=1.2
Q ss_pred cccccchhhhhhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhh
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~ 684 (698)
++.+|++.. ..+.+++|+|++++++++++.+++||.++|.+++.+.+||||++++|+|+||++|+.+...+..
T Consensus 188 vT~RD~rf~----d~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~ 260 (556)
T 4af0_A 188 VTGRDVQFQ----DAETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPY 260 (556)
T ss_dssp --------------------------------------------------------------------------CTT
T ss_pred Eeccccccc----ccceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCc
Confidence 455666432 2356899999999999999999999999999999999999999999999999999998765443
No 108
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=97.64 E-value=6.4e-05 Score=78.84 Aligned_cols=63 Identities=17% Similarity=0.267 Sum_probs=57.3
Q ss_pred hccccchhc---cccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 621 KRRVFVSEV---MRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 621 ~~~i~v~dv---M~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
....+++++ |.++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+...
T Consensus 184 ~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~ 249 (323)
T 3t4n_C 184 FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGG 249 (323)
T ss_dssp GCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTT
T ss_pred hhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhc
Confidence 345689999 999999999999999999999999999999999989999999999999987643
No 109
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=97.63 E-value=7.5e-05 Score=78.64 Aligned_cols=64 Identities=13% Similarity=0.217 Sum_probs=57.7
Q ss_pred hhhhccccchhcc--ccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccC-CeEEEEEeHHHHHHHHH
Q 005409 618 EELKRRVFVSEVM--RTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSK 681 (698)
Q Consensus 618 ~~~~~~i~v~dvM--~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dl~~~l~ 681 (698)
++.+.+.+++|+| +++++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+.+.
T Consensus 29 ~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~ 95 (330)
T 2v8q_E 29 TTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILH 95 (330)
T ss_dssp HHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHH
T ss_pred HHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHH
Confidence 3446678999999 7789999999999999999999999999999987 79999999999998764
No 110
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.61 E-value=5.8e-05 Score=74.78 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=53.1
Q ss_pred cccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHH
Q 005409 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (698)
Q Consensus 623 ~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l 680 (698)
..++.++|.++++++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+..
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~ 69 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLD 69 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSC
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhc
Confidence 3568999999999999999999999999999999999999889999999999997643
No 111
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.59 E-value=9.7e-06 Score=91.14 Aligned_cols=75 Identities=21% Similarity=0.214 Sum_probs=0.8
Q ss_pred cccccchhhhhhhhccccchhccccC--ceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhh
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMRTR--YVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ 684 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~~~--~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~ 684 (698)
++.+|+... ....+.+++|+|+++ ++++++++++.|+++.|.+++.+.+||||++++++|+||++|+.+.+....
T Consensus 147 Vt~~Dl~~~--~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~ 223 (503)
T 1me8_A 147 VTQRDYPID--LTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHN 223 (503)
T ss_dssp -----------------------------------------------------------------------------CC
T ss_pred EEHHHHHhh--hccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhccc
Confidence 445555321 223467899999987 999999999999999999999999999999999999999999999876443
No 112
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.59 E-value=6.5e-05 Score=78.11 Aligned_cols=59 Identities=19% Similarity=0.336 Sum_probs=53.7
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHc-----CCCEEEEEccCCeEEEEEeHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEF 679 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~-----~~~~lpVVd~~g~lvGiVt~~dl~~~ 679 (698)
....+++++|+++++++++++++.++++.|.++ +.+.+||+|++++++|+||.+|+.+.
T Consensus 134 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~ 197 (286)
T 2oux_A 134 YEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN 197 (286)
T ss_dssp SCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS
T ss_pred CChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC
Confidence 356789999999999999999999999999987 77889999988999999999999753
No 113
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=97.56 E-value=8e-05 Score=76.28 Aligned_cols=60 Identities=23% Similarity=0.302 Sum_probs=51.1
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHH-HHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE-FSK 681 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~-~l~ 681 (698)
.+.+++++|.+++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+ .+.
T Consensus 58 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 58 DEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFA 118 (282)
T ss_dssp ------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTT
T ss_pred ccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHh
Confidence 356899999999999999999999999999999999999998899999999999998 654
No 114
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.54 E-value=0.00012 Score=82.00 Aligned_cols=61 Identities=30% Similarity=0.341 Sum_probs=57.4
Q ss_pred ccccchhcccc-CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 622 RRVFVSEVMRT-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 622 ~~i~v~dvM~~-~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
.+.+++|+|++ +++++++++++.++++.|.+++.+.+||||++++++|+||++|+.+.+.+
T Consensus 150 ~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 150 YNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp SSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 46789999998 89999999999999999999999999999999999999999999998874
No 115
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.54 E-value=8.6e-05 Score=83.95 Aligned_cols=75 Identities=11% Similarity=0.119 Sum_probs=59.2
Q ss_pred cccccchhhh--hhhhccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccC----CeEEEEEeHHHHHHHHH
Q 005409 608 LCIDDWNLEV--EELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND----NILIGLLTLGDIEEFSK 681 (698)
Q Consensus 608 l~~~d~~~~~--~~~~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~----g~lvGiVt~~dl~~~l~ 681 (698)
++.+|+.+.. .....+.+++++|+++++++++++++.+++++|.+++ ..||||++ ++++|+||++|+.+.+.
T Consensus 433 Vt~~Dll~~l~~~~~~~~~~V~~im~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~ 510 (527)
T 3pc3_A 433 VGQETLITQIVSMNRQQSDPAIKALNKRVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIA 510 (527)
T ss_dssp EEHHHHHHHHHHHCCCTTSBGGGGEETTCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHH
T ss_pred EEHHHHHHHHHhccCcCCCcHHHHhcCCCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHH
Confidence 4556664221 1233467899999999999999999999999995544 57999984 89999999999999987
Q ss_pred Hhh
Q 005409 682 YAQ 684 (698)
Q Consensus 682 ~~~ 684 (698)
...
T Consensus 511 ~~~ 513 (527)
T 3pc3_A 511 AGK 513 (527)
T ss_dssp TCC
T ss_pred hcc
Confidence 543
No 116
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.48 E-value=0.00017 Score=74.38 Aligned_cols=59 Identities=22% Similarity=0.224 Sum_probs=53.5
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHc-----CCCEEEEEccCCeEEEEEeHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEF 679 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~-----~~~~lpVVd~~g~lvGiVt~~dl~~~ 679 (698)
....+++++|+++++++++++++.++++.|.++ +...+||+|++++++|+||.+|+...
T Consensus 132 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 195 (278)
T 2yvy_A 132 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 195 (278)
T ss_dssp SCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS
T ss_pred CCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC
Confidence 346789999999999999999999999999886 67999999988999999999999754
No 117
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.37 E-value=2.8e-05 Score=87.02 Aligned_cols=75 Identities=25% Similarity=0.286 Sum_probs=1.8
Q ss_pred cccccchhhhhhhhccccchhccc-c-CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHhhh
Q 005409 608 LCIDDWNLEVEELKRRVFVSEVMR-T-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA 685 (698)
Q Consensus 608 l~~~d~~~~~~~~~~~i~v~dvM~-~-~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~~~ 685 (698)
++.+|+.. ....+.+++|+|+ + +++++++++++.|++++|.+++.+.+||||++++++|+||++|+.+..++...
T Consensus 134 Vt~rDl~~---~~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~p~a 210 (490)
T 4avf_A 134 VTGRDLRV---KPNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLA 210 (490)
T ss_dssp ----------------------------------------------------------------------------CTTC
T ss_pred EEhHHhhh---ccccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccCcch
Confidence 45566532 1234678999999 4 69999999999999999999999999999999999999999999998765443
No 118
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=97.32 E-value=0.00033 Score=73.69 Aligned_cols=60 Identities=17% Similarity=0.243 Sum_probs=54.8
Q ss_pred cccchh---ccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 623 RVFVSE---VMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 623 ~i~v~d---vM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
..++++ +|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+..
T Consensus 181 ~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 181 RVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQD 243 (334)
T ss_dssp CCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTT
T ss_pred hCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhc
Confidence 467888 589999999999999999999999999999999988999999999999987653
No 119
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.20 E-value=4.7e-05 Score=85.25 Aligned_cols=60 Identities=28% Similarity=0.403 Sum_probs=0.5
Q ss_pred ccccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 622 ~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
.+.+++++|+++++++++++++.|+++.|.+++.+.+||||++++++|+||++|+.+...
T Consensus 148 ~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 148 EGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -----------------------------------------------------------C
T ss_pred CCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 456899999999999999999999999999999999999999999999999999998865
No 120
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.18 E-value=5.7e-05 Score=84.72 Aligned_cols=62 Identities=19% Similarity=0.256 Sum_probs=5.9
Q ss_pred ccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 622 ~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
.+.+++|+|++ +++++++++++.|+++.|.+++.+.+||||++++++|+||++|+.+.+...
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp --------------------------------------------------------CHHHHTCT
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 45689999998 999999999999999999999999999999999999999999999987643
No 121
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.15 E-value=4.2e-05 Score=85.69 Aligned_cols=62 Identities=21% Similarity=0.183 Sum_probs=44.8
Q ss_pred ccccchhccc-c-CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHHHh
Q 005409 622 RRVFVSEVMR-T-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (698)
Q Consensus 622 ~~i~v~dvM~-~-~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~~~ 683 (698)
.+.+++|+|+ + +++++++++++.|+++.|.+++.+.+||||++|+++|+||++|+.+..++.
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p 210 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKP 210 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCT
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhccc
Confidence 4678999999 4 589999999999999999999999999999999999999999999875543
No 122
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.12 E-value=0.00044 Score=77.06 Aligned_cols=59 Identities=22% Similarity=0.224 Sum_probs=53.0
Q ss_pred hccccchhccccCceEEcCCCCHHHHHHHHHHc-----CCCEEEEEccCCeEEEEEeHHHHHHH
Q 005409 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEF 679 (698)
Q Consensus 621 ~~~i~v~dvM~~~~~~v~~~~~l~eal~~m~~~-----~~~~lpVVd~~g~lvGiVt~~dl~~~ 679 (698)
.++.+++++|++++++++++++++|+++.|+++ +...+||+|++++++|+||.+|+...
T Consensus 152 ~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~ 215 (473)
T 2zy9_A 152 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 215 (473)
T ss_dssp SCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS
T ss_pred CCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC
Confidence 356789999999999999999999999999876 46889999988999999999999763
No 123
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.11 E-value=0.00027 Score=79.07 Aligned_cols=54 Identities=20% Similarity=0.202 Sum_probs=49.0
Q ss_pred ccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHH
Q 005409 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIE 677 (698)
Q Consensus 624 i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~ 677 (698)
.+++++|.++++++++++++.|+++.|.+++++.+||+|++++++|+||.+|++
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR 142 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh
Confidence 456789999999999999999999999999999999999889999999999996
No 124
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=96.81 E-value=0.00092 Score=75.08 Aligned_cols=55 Identities=18% Similarity=0.123 Sum_probs=50.6
Q ss_pred ccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEcc--CCeEEEEEeHHHHHH
Q 005409 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN--DNILIGLLTLGDIEE 678 (698)
Q Consensus 624 i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~--~g~lvGiVt~~dl~~ 678 (698)
++.++.|.++++++++++++.|+++.|.+++++.+||+|+ +++++|+||.+|++.
T Consensus 113 ~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~ 169 (511)
T 3usb_A 113 KRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF 169 (511)
T ss_dssp HTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT
T ss_pred hccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh
Confidence 4567788889999999999999999999999999999998 899999999999964
No 125
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.74 E-value=0.00024 Score=79.63 Aligned_cols=55 Identities=27% Similarity=0.228 Sum_probs=1.8
Q ss_pred ccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHH
Q 005409 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE 678 (698)
Q Consensus 624 i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~ 678 (698)
.+++|+|.++++++++++++.|+++.|.+++++.+||+|++++++|+||.+|+++
T Consensus 95 ~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 95 KKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRF 149 (494)
T ss_dssp HTC----------------------------------------------------
T ss_pred hhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHh
Confidence 4578899999999999999999999999999999999998899999999999975
No 126
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.69 E-value=0.0016 Score=72.78 Aligned_cols=55 Identities=20% Similarity=0.108 Sum_probs=51.2
Q ss_pred ccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEc--cCCeEEEEEeHHHHHH
Q 005409 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVD--NDNILIGLLTLGDIEE 678 (698)
Q Consensus 624 i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd--~~g~lvGiVt~~dl~~ 678 (698)
.+++|+|.+++.++++++++.|+++.|.+++++.+||+| ++++++|+||.+|+.+
T Consensus 90 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 90 KRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRF 146 (491)
T ss_dssp HHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred hhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhh
Confidence 346889999999999999999999999999999999999 7899999999999975
No 127
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.66 E-value=6e-05 Score=84.97 Aligned_cols=60 Identities=22% Similarity=0.273 Sum_probs=43.2
Q ss_pred ccccchhcccc--CceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHHHHH
Q 005409 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (698)
Q Consensus 622 ~~i~v~dvM~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~~l~ 681 (698)
...+++++|++ +++++++++++.|+++.|.+++.+.+||||++|+++|+||++|+.+.+.
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp ----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 45689999998 9999999999999999999999999999999999999999999987654
No 128
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=96.66 E-value=0.00026 Score=79.43 Aligned_cols=57 Identities=16% Similarity=0.191 Sum_probs=4.3
Q ss_pred ccccchhc-cccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccC---CeEEEEEeHHHHHH
Q 005409 622 RRVFVSEV-MRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND---NILIGLLTLGDIEE 678 (698)
Q Consensus 622 ~~i~v~dv-M~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~---g~lvGiVt~~dl~~ 678 (698)
..++..++ |.++++++++++++.|+++.|.+++++.+||+|++ ++++|+||.+|+++
T Consensus 94 ~~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~ 154 (503)
T 1me8_A 94 HAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPI 154 (503)
T ss_dssp HHHHTTTC-----------------------------------------------------
T ss_pred hhhhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHh
Confidence 34455566 99999999999999999999999999999999987 89999999999985
No 129
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.27 E-value=0.0006 Score=76.22 Aligned_cols=54 Identities=24% Similarity=0.181 Sum_probs=3.6
Q ss_pred ccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHH
Q 005409 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE 678 (698)
Q Consensus 624 i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~ 678 (698)
.+++++|.++++++++++++.|+++.|.+++++.+||+| +++++|+||.+|++.
T Consensus 88 k~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~ 141 (490)
T 4avf_A 88 KKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRV 141 (490)
T ss_dssp HHCCC--------------------------------------------------
T ss_pred cccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhh
Confidence 457889999999999999999999999999999999999 799999999999963
No 130
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.05 E-value=0.00062 Score=76.67 Aligned_cols=56 Identities=18% Similarity=0.141 Sum_probs=29.6
Q ss_pred ccchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEcc---CCeEEEEEeHHHHHHH
Q 005409 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN---DNILIGLLTLGDIEEF 679 (698)
Q Consensus 624 i~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~---~g~lvGiVt~~dl~~~ 679 (698)
.+++|+|.++++++++++++.|+++.|.+++++.+||+|+ +++++|+||++|+++.
T Consensus 108 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 108 KNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFL 166 (514)
T ss_dssp HTCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC--
T ss_pred hhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhh
Confidence 3678999999999999999999999999999999999997 5899999999999764
No 131
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.65 E-value=0.0019 Score=71.61 Aligned_cols=52 Identities=15% Similarity=0.099 Sum_probs=0.9
Q ss_pred hhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEcc---CCeEEEEEeHHHHHH
Q 005409 627 SEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN---DNILIGLLTLGDIEE 678 (698)
Q Consensus 627 ~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~---~g~lvGiVt~~dl~~ 678 (698)
++.|..++++++|+.++.|+.++|.+++++.+||+|+ +++|+||||.+|++-
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf 195 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQF 195 (556)
T ss_dssp CC-----------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccc
Confidence 4567889999999999999999999999999999986 579999999999864
No 132
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=94.71 E-value=0.0053 Score=68.53 Aligned_cols=53 Identities=19% Similarity=0.209 Sum_probs=1.7
Q ss_pred cchhccccCceEEcCCCCHHHHHHHHHHcCCCEEEEEccCCeEEEEEeHHHHHH
Q 005409 625 FVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE 678 (698)
Q Consensus 625 ~v~dvM~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dl~~ 678 (698)
..+|.|..++.++++++++.|+++.|.+++++.+||+|+ ++++|+||.+|+..
T Consensus 94 ~~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~ 146 (486)
T 2cu0_A 94 RAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA 146 (486)
T ss_dssp TCC---------------------------------------------------
T ss_pred chhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc
Confidence 457789999999999999999999999999999999997 99999999999864
No 133
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=23.84 E-value=1.1e+02 Score=24.62 Aligned_cols=28 Identities=11% Similarity=0.176 Sum_probs=20.7
Q ss_pred CCEEEEEccCCeEEEEEeHHHHHHHHHH
Q 005409 655 QSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (698)
Q Consensus 655 ~~~lpVVd~~g~lvGiVt~~dl~~~l~~ 682 (698)
...+=++|++|..+|++++++.++.-++
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e 40 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAAR 40 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHH
Confidence 3456678888888888888888776553
Done!