Query 005411
Match_columns 698
No_of_seqs 423 out of 2685
Neff 7.4
Searched_HMMs 29240
Date Tue Mar 26 00:36:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005411.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005411hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qaj_A Glutamine synthetase; A 100.0 4.6E-70 1.6E-74 601.4 23.3 284 400-698 10-297 (444)
2 4hpp_A Probable glutamine synt 100.0 2.2E-69 7.4E-74 595.2 28.6 280 405-698 4-289 (443)
3 3ng0_A Glutamine synthetase; G 100.0 1.2E-67 4.1E-72 587.7 28.4 284 400-698 9-323 (473)
4 1f52_A Glutamine synthetase; A 100.0 4.1E-65 1.4E-69 567.8 30.0 283 401-698 7-320 (468)
5 4acf_A Glutamine synthetase 1; 100.0 4.7E-65 1.6E-69 570.3 30.1 288 399-698 17-336 (486)
6 2qpx_A Predicted metal-depende 100.0 8.4E-60 2.9E-64 514.6 18.1 363 3-383 2-373 (376)
7 2j9i_A Glutamate-ammonia ligas 100.0 1.1E-60 3.8E-65 524.4 11.0 268 401-698 7-282 (421)
8 3fky_A Glutamine synthetase; b 100.0 4.2E-57 1.4E-61 487.8 23.6 266 403-698 18-291 (370)
9 2ojw_A Glutamine synthetase; a 100.0 9.4E-57 3.2E-61 487.3 24.4 269 398-698 33-317 (384)
10 1j5s_A Uronate isomerase; TM00 100.0 8E-57 2.7E-61 491.8 22.1 360 4-379 27-462 (463)
11 3iac_A Glucuronate isomerase; 100.0 2.9E-55 1E-59 473.9 23.5 362 4-381 20-473 (473)
12 2d3a_A Glutamine synthetase; l 100.0 2.3E-55 7.8E-60 472.4 21.6 261 405-698 15-290 (356)
13 2q01_A Uronate isomerase; stru 100.0 3.1E-54 1.1E-58 475.0 26.9 365 4-386 26-478 (497)
14 3o6x_A Glutamine synthetase; t 100.0 5.9E-47 2E-51 426.4 10.2 224 467-698 144-398 (729)
15 2qee_A BH0493 protein; amidohy 100.0 4.5E-38 1.5E-42 338.3 17.6 338 4-385 13-421 (437)
16 3irs_A Uncharacterized protein 99.8 2.3E-18 7.9E-23 181.1 19.5 149 211-383 135-283 (291)
17 3ij6_A Uncharacterized metal-d 99.6 1.5E-15 5.2E-20 161.1 12.1 172 186-381 108-306 (312)
18 4do7_A Amidohydrolase 2; enzym 99.6 2.7E-15 9.2E-20 158.5 12.9 151 210-384 118-292 (303)
19 3cjp_A Predicted amidohydrolas 99.6 1.4E-14 4.9E-19 150.1 12.5 138 212-382 128-266 (272)
20 4inf_A Metal-dependent hydrola 99.5 1E-14 3.5E-19 158.3 10.3 167 187-380 158-373 (373)
21 4d9a_A 2-pyrone-4,6-dicarbaxyl 99.5 1.4E-14 4.7E-19 153.1 9.0 149 209-383 133-295 (303)
22 3nur_A Amidohydrolase; TIM bar 99.5 6.4E-15 2.2E-19 159.1 6.4 170 186-382 139-355 (357)
23 2ffi_A 2-pyrone-4,6-dicarboxyl 99.5 1.7E-14 5.9E-19 150.5 8.2 149 210-383 120-282 (288)
24 4i6k_A Amidohydrolase family p 99.5 5.6E-14 1.9E-18 147.7 9.1 146 211-382 134-293 (294)
25 2dvt_A Thermophilic reversible 99.4 6.4E-14 2.2E-18 148.7 7.3 146 209-381 140-325 (327)
26 2f6k_A Metal-dependent hydrola 99.4 1.1E-13 3.7E-18 145.6 8.8 171 187-380 102-307 (307)
27 2wm1_A 2-amino-3-carboxymucona 99.4 5.4E-13 1.8E-17 142.5 9.6 170 187-383 122-333 (336)
28 2hbv_A 2-amino-3-carboxymucona 99.4 1.5E-12 5.1E-17 139.1 10.5 147 208-381 152-333 (334)
29 4dzi_A Putative TIM-barrel met 99.3 2.3E-12 7.8E-17 142.0 7.4 170 186-384 173-399 (423)
30 2gwg_A 4-oxalomesaconate hydra 99.3 1.9E-12 6.3E-17 139.3 6.2 154 209-380 154-332 (350)
31 2gzx_A Putative TATD related D 99.3 1.4E-11 4.7E-16 126.6 11.2 147 209-381 104-256 (265)
32 1j6o_A TATD-related deoxyribon 99.2 1.9E-11 6.5E-16 126.5 10.4 146 209-381 115-266 (268)
33 1yix_A Deoxyribonuclease YCFH; 99.1 2.7E-10 9.2E-15 117.0 10.0 147 209-382 106-258 (265)
34 1zzm_A Putative deoxyribonucle 98.8 6.8E-09 2.3E-13 106.3 10.2 145 210-381 110-259 (259)
35 1xwy_A DNAse TATD, deoxyribonu 98.8 2.5E-08 8.7E-13 102.3 13.2 145 210-381 108-263 (264)
36 2y1h_A Putative deoxyribonucle 98.7 8.9E-08 3.1E-12 98.7 14.6 142 211-381 123-266 (272)
37 1bf6_A Phosphotriesterase homo 98.4 1.3E-06 4.4E-11 90.4 13.1 147 215-379 139-291 (291)
38 2xio_A Putative deoxyribonucle 98.4 1.7E-06 5.7E-11 90.8 13.2 144 211-382 124-294 (301)
39 3rcm_A TATD family hydrolase; 98.3 1.9E-06 6.4E-11 89.8 10.7 152 212-389 112-273 (287)
40 3ovg_A Amidohydrolase; structu 98.2 6.9E-06 2.4E-10 88.3 13.4 151 219-383 174-333 (363)
41 2vc7_A Aryldialkylphosphatase; 98.2 6.6E-06 2.3E-10 86.3 12.7 145 216-379 153-314 (314)
42 3pnz_A Phosphotriesterase fami 98.1 1.2E-05 4.1E-10 85.4 11.5 146 220-381 174-329 (330)
43 3k2g_A Resiniferatoxin-binding 98.0 3.2E-05 1.1E-09 83.2 13.4 149 219-383 195-357 (364)
44 3gg7_A Uncharacterized metallo 98.0 1E-05 3.6E-10 82.6 9.1 145 211-383 101-247 (254)
45 3gtx_A Organophosphorus hydrol 98.0 2.8E-05 9.4E-10 82.9 12.3 145 220-379 179-339 (339)
46 2ob3_A Parathion hydrolase; me 97.9 5.2E-05 1.8E-09 80.5 12.6 145 219-379 153-325 (330)
47 3rhg_A Putative phophotriester 97.9 7.4E-05 2.5E-09 80.4 12.7 150 219-384 184-348 (365)
48 3tn4_A Phosphotriesterase; lac 97.8 0.00014 4.9E-09 77.8 13.9 148 219-379 198-359 (360)
49 3guw_A Uncharacterized protein 97.8 7.8E-06 2.7E-10 84.0 3.6 138 215-383 111-251 (261)
50 3ipw_A Hydrolase TATD family p 97.3 0.0024 8.1E-08 67.4 14.5 95 216-329 156-251 (325)
51 2gwd_A Glutamate cysteine liga 97.0 0.0041 1.4E-07 68.6 12.3 92 585-694 91-214 (449)
52 1r8g_A Hypothetical protein YB 96.8 0.01 3.4E-07 63.9 14.0 130 524-694 11-169 (372)
53 2z26_A Dihydroorotase, dhoase; 96.5 0.0021 7.3E-08 68.4 5.7 155 214-381 120-306 (347)
54 2i5g_A Amidohydrolase; NYSGXRC 95.8 0.03 1E-06 58.9 10.1 69 301-379 225-320 (325)
55 3e2v_A 3'-5'-exonuclease; stru 95.8 0.11 3.9E-06 55.9 14.6 57 266-328 250-306 (401)
56 3ly0_A Dipeptidase AC. metallo 92.6 0.22 7.5E-06 53.0 7.7 70 301-380 282-353 (364)
57 2vun_A Enamidase; nicotinate d 91.1 3.9 0.00013 42.9 15.6 144 212-380 172-320 (386)
58 3pnu_A Dihydroorotase; TIM bar 90.8 1.4 4.7E-05 46.9 11.6 76 212-295 134-212 (359)
59 3b40_A PVDM, probable dipeptid 90.3 0.43 1.5E-05 51.8 7.2 70 301-380 335-406 (417)
60 1itu_A Renal dipeptidase; glyc 89.1 1.2 4.1E-05 47.5 9.3 70 301-380 264-336 (369)
61 3id7_A Dipeptidase; streptomyc 89.0 0.89 3.1E-05 48.9 8.4 71 300-380 295-368 (400)
62 2rag_A Dipeptidase; aminohydro 88.1 0.78 2.7E-05 49.7 7.2 69 301-379 336-406 (417)
63 3neh_A Renal dipeptidase famil 87.2 3.9 0.00013 42.6 11.6 71 300-381 238-311 (318)
64 3gnh_A L-lysine, L-arginine ca 85.7 17 0.00058 38.0 16.2 139 211-384 204-362 (403)
65 2z00_A Dihydroorotase; zinc bi 85.6 2.5 8.6E-05 45.0 9.7 32 346-381 335-366 (426)
66 3hm7_A Allantoinase; metallo-d 85.4 2.5 8.6E-05 45.7 9.6 163 215-383 170-380 (448)
67 4gxw_A Adenosine deaminase; am 83.3 1.8 6E-05 46.4 7.0 84 147-236 129-219 (380)
68 2ics_A Adenine deaminase; TIM 80.9 13 0.00044 38.6 12.7 131 217-382 171-319 (379)
69 3ln6_A Glutathione biosynthesi 78.4 5.5 0.00019 46.5 9.4 113 583-695 53-197 (750)
70 3gri_A Dihydroorotase, dhoase; 74.9 8.8 0.0003 41.1 9.4 159 213-380 157-362 (424)
71 3mpg_A Dihydroorotase, dhoase; 73.6 8 0.00027 41.3 8.6 159 214-381 159-364 (428)
72 3e74_A Allantoinase; (beta/alp 73.1 12 0.00043 40.7 10.1 158 215-381 188-395 (473)
73 3nqb_A Adenine deaminase 2; PS 70.9 35 0.0012 38.6 13.4 136 212-381 200-337 (608)
74 2qs8_A XAA-Pro dipeptidase; am 65.5 53 0.0018 34.4 13.0 137 213-384 215-372 (418)
75 4aql_A Guanine deaminase; hydr 64.6 40 0.0014 36.6 11.9 158 213-384 242-408 (476)
76 4f0r_A 5-methylthioadenosine/S 61.6 45 0.0015 35.4 11.5 157 213-384 199-361 (447)
77 3be7_A Zn-dependent arginine c 60.9 79 0.0027 32.8 13.2 132 215-381 207-358 (408)
78 3sfw_A Dihydropyrimidinase; hy 60.6 61 0.0021 34.8 12.4 162 216-383 166-381 (461)
79 3ln7_A Glutathione biosynthesi 60.4 34 0.0012 39.8 10.7 113 583-695 52-198 (757)
80 1nxi_A Conserved hypothetical 60.0 27 0.00092 31.3 7.7 90 511-627 22-114 (132)
81 3feq_A Putative amidohydrolase 59.8 45 0.0015 34.9 11.0 137 212-384 210-366 (423)
82 4dzh_A Amidohydrolase; adenosi 58.6 1.2E+02 0.004 32.5 14.4 154 215-384 210-370 (472)
83 3gip_A N-acyl-D-glutamate deac 57.8 41 0.0014 36.5 10.4 58 318-382 358-416 (480)
84 4dyk_A Amidohydrolase; adenosi 56.1 1.3E+02 0.0044 31.7 14.0 155 215-384 203-363 (451)
85 2r8c_A Putative amidohydrolase 56.0 1.4E+02 0.0047 31.3 14.1 137 212-384 213-369 (426)
86 3dc8_A Dihydropyrimidinase; TI 54.5 51 0.0018 36.0 10.6 113 261-383 228-378 (490)
87 3ooq_A Amidohydrolase; structu 53.5 38 0.0013 35.5 9.1 133 221-384 214-350 (396)
88 2fty_A Dihydropyrimidinase; al 52.1 35 0.0012 38.0 8.9 35 344-382 400-435 (559)
89 3lnp_A Amidohydrolase family p 48.1 75 0.0026 33.8 10.5 155 215-384 228-388 (468)
90 1va6_A Glutamate--cysteine lig 47.2 23 0.00078 39.2 6.1 109 584-694 56-202 (518)
91 3h4u_A Amidohydrolase; signatu 45.2 62 0.0021 34.7 9.3 152 215-382 241-398 (479)
92 2ood_A BLR3880 protein; PSI-II 44.9 94 0.0032 33.4 10.7 112 213-327 213-328 (475)
93 1xrt_A Dihydroorotase, dhoase; 44.8 86 0.0029 33.6 10.3 24 213-236 205-228 (467)
94 3qy7_A Tyrosine-protein phosph 43.8 2.5E+02 0.0086 27.7 14.6 101 262-380 129-234 (262)
95 1zpv_A ACT domain protein; str 43.4 15 0.0005 30.0 3.0 67 565-633 16-82 (91)
96 1gkp_A Hydantoinase; hydrolase 39.8 1.8E+02 0.0063 30.5 11.9 34 345-382 345-378 (458)
97 1v77_A PH1877P, hypothetical p 37.3 55 0.0019 31.5 6.5 108 251-379 89-208 (212)
98 3nzt_A Glutamate--cysteine lig 36.1 42 0.0014 37.1 5.9 143 523-694 31-208 (525)
99 2paj_A Putative cytosine/guani 33.0 1.3E+02 0.0044 32.2 9.4 106 213-326 228-337 (492)
100 1u8s_A Glycine cleavage system 31.5 2.1E+02 0.0071 26.6 9.5 67 565-633 104-178 (192)
101 3ig5_A Glutamate-cysteine liga 30.5 84 0.0029 35.6 7.1 96 513-623 33-135 (692)
102 1v5s_A MAP/microtubule affinit 29.2 1.1E+02 0.0039 27.0 6.5 69 558-626 33-120 (126)
103 3ose_A Serine/threonine-protei 28.8 70 0.0024 27.9 5.1 69 558-626 33-120 (120)
104 3rys_A Adenosine deaminase 1; 28.7 1.2E+02 0.004 31.6 7.7 196 147-384 113-324 (343)
105 3ls9_A Triazine hydrolase; atr 28.5 1.5E+02 0.005 31.2 8.8 153 213-382 218-379 (456)
106 2q09_A Imidazolonepropionase; 27.3 1.5E+02 0.0053 30.7 8.6 139 215-384 224-364 (416)
107 3g8r_A Probable spore coat pol 27.2 62 0.0021 33.9 5.2 76 207-294 118-201 (350)
108 1rk6_A D-aminoacylase; TIM bar 26.1 57 0.0019 35.4 4.9 56 319-381 373-429 (496)
109 2fao_A Probable ATP-dependent 25.9 66 0.0022 33.0 4.9 71 575-651 111-186 (309)
110 2qt3_A N-isopropylammelide iso 24.8 5.6E+02 0.019 26.0 12.5 23 214-236 198-220 (403)
111 3icj_A Uncharacterized metal-d 23.9 3E+02 0.01 30.2 10.4 145 212-381 327-481 (534)
112 3tc3_A UV damage endonuclease; 21.1 1.1E+02 0.0038 31.4 5.5 65 567-637 61-127 (310)
No 1
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=100.00 E-value=4.6e-70 Score=601.35 Aligned_cols=284 Identities=28% Similarity=0.445 Sum_probs=258.1
Q ss_pred hhhhccCCeeEEEEEEecCCCCceeEEEechhhhhHHhhcccccccccccccccCCCCCCCCCCCCCccEEEEeecCCce
Q 005411 400 KSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRW 479 (698)
Q Consensus 400 ~~~~~~~~i~~v~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~L~PD~sT~~ 479 (698)
...+++++|+||+++|+|++|++|+|.||+++|++. .++|++|+.+++ ++.. ..+.+|++|+||++|++
T Consensus 10 ~~~~~~~~i~~v~l~~~D~~G~~r~k~ip~~~~~~~-~~~G~~fdgssi------~g~~----~~~~~D~~l~PD~~T~~ 78 (444)
T 3qaj_A 10 EKLVKEENVKYIRLQFTDILGTIKNVEIPVSQLGKA-LDNKVMFDGSSI------EGFV----RIEESDMYLYPDLNTFV 78 (444)
T ss_dssp HHHHHHHTCCEEEEEEECSSSCEEEEEEEGGGHHHH-HTTCCEEETTTS------TTSS----CTTCCEEECCBCGGGCE
T ss_pred HHHHHhCCCCEEEEEEECCCCCEEEEEEeHHHHHHH-HhCCccccCccc------cCcc----CCCCCCEEEEEecCceE
Confidence 344677799999999999999999999999999875 578999887653 1111 12468999999999999
Q ss_pred eccCCCC---ccEEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCce-eeeeeeeEEEEEeecccCCCCCceeCCCCCc
Q 005411 480 RIPWQKQ---EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLV-LNAGFEIEFYLLKSVLREGKEEWVPIDFTPY 555 (698)
Q Consensus 480 ~~Pw~~~---~a~V~~d~~~~dg~p~~~cPR~~L~r~~~~l~~~~G~~-~~~g~E~EF~l~~~~~~~g~~~~~p~~~~~~ 555 (698)
++||.++ +++|+||++++||+|++.|||++|||++++++ +.|++ +.+|+|+|||||+. ..+|.....+.++++|
T Consensus 79 ~~Pw~~~~~~~a~v~cd~~~~dG~p~~~~pR~iLkr~~~~~~-~~G~~~~~~g~E~EF~l~~~-~~~g~~~~~~~~~~~y 156 (444)
T 3qaj_A 79 IFPWTAEKGKVARFICDIYNPDGTPFEGDPRNNLKRILKEME-DLGFSDFNLGPEPEFFLFKL-DEKGEPTLELNDKGGY 156 (444)
T ss_dssp EEHHHHHHHCEEEEEBCCBCTTSCBCSSCHHHHHHHHHHHHH-TTTCCEEEEEEEECEEEEEE-CSSSCEEEEESCCCCT
T ss_pred ECccccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCCeeeEEeceEEEEEec-CCCCCCCCcCcCCCCc
Confidence 9999876 89999999999999999999999999999998 68999 99999999999997 2334344567788899
Q ss_pred ccCccccCchHHHHHHHHHHHhCCCceeeeecCCCCCceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCeeeeccccC
Q 005411 556 CSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFA 635 (698)
Q Consensus 556 ~~~~~~~~~~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpKP~ 635 (698)
|+..+.+...+++++|+++|+++||+||++|+|+|||||||++.|.+++++||+++++|++||+||++||++|||||||+
T Consensus 157 ~~~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~ 236 (444)
T 3qaj_A 157 FDLAPTDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKTIARKHGLHATFMPKPL 236 (444)
T ss_dssp TCCTTTSCCTTHHHHHHHHHHTTTCCEEEEEECSSTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECCSCSS
T ss_pred cccCCCcchHHHHHHHHHHHHHCCCCeEEeEcCcCCCcEEEecCCChHHHHHHHHHHHHHHHHHHHHHcCCEEEEcCCcC
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 005411 636 LDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL 698 (698)
Q Consensus 636 ~~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~ 698 (698)
.+.+|||||+|+|||++|+|+|. |++++.+||+++++||||||+|+|+++||++||+|||+
T Consensus 237 ~~~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGlL~h~~~l~a~~~PtvNSYk 297 (444)
T 3qaj_A 237 FGVNGSGMHCNLSLFKNGVNAFF--DENADLQLSETAKHFIAGIVKHATSFTAVTNPTVNSYK 297 (444)
T ss_dssp TTSCCCCEEEEEEEEETTEETTC--CTTSSSSCCHHHHHHHHHHHHTHHHHHHHHSCSSTHHH
T ss_pred CCCCCCcceeeeccccCCCcccC--CCCcccchHHHHHHHHHHHHHHHHHHHHHHCCCCcccc
Confidence 99999999999999999999999 45667889999999999999999999999999999994
No 2
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.2e-69 Score=595.18 Aligned_cols=280 Identities=29% Similarity=0.416 Sum_probs=256.7
Q ss_pred cCCeeEEEEEEecCCCCceeEEEechhhhhHHhhcccccccccccccccCCCCCCCCCCCCCccEEEEeecCCceeccCC
Q 005411 405 ESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQ 484 (698)
Q Consensus 405 ~~~i~~v~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~L~PD~sT~~~~Pw~ 484 (698)
=++|+||+++|+|++|++|+|+||+++|.+. .++|++|+.+.+.++.. +......+.++.+|++|+||++|++++||.
T Consensus 4 ~~~v~~v~l~~~D~~G~~r~k~vp~~~~~~~-~~~G~~f~~s~~~~~~~-~~~~~~~~~~~~~D~~l~PD~~T~~~~Pw~ 81 (443)
T 4hpp_A 4 LQPVRLVSFVTTDLAGITRGRSLPLATLEEQ-LASGCGWVPANSSLTPQ-DLIDESSPWGSHGDLRLLPDPNSRVRVEQG 81 (443)
T ss_dssp CCCCCEEEEEEECTTSCEEEEEEEGGGHHHH-HTTCEEECGGGGGCCTT-SCCCTTCSCSSSCCEEEEECGGGCEEECCC
T ss_pred CCCCCEEEEEEECCCCCEEEEEEEHHHHHHH-HhCCcccCchhheeecc-CccccccCCCCCCCEEEEEcccceEECCcc
Confidence 3679999999999999999999999999885 57899999987776643 333333445678999999999999999999
Q ss_pred C-----CccEEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCceeeeeeeeEEEEEeecccCCCCCceeCCCCCcccCc
Q 005411 485 K-----QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTA 559 (698)
Q Consensus 485 ~-----~~a~V~~d~~~~dg~p~~~cPR~~L~r~~~~l~~~~G~~~~~g~E~EF~l~~~~~~~g~~~~~p~~~~~~~~~~ 559 (698)
+ ++++|+||++++||+|++.|||++|||++++++ +.|+++++|+|+|||||+. .|.++++||+..
T Consensus 82 ~~~~~~~~a~v~cd~~~~dG~p~~~~pR~~L~r~~~~~~-~~G~~~~~g~E~EF~l~~~---------~p~~~~~~y~~~ 151 (443)
T 4hpp_A 82 PDAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYR-DSGLQVIAAFEHEFSLLGL---------PGERPAAAFSLQ 151 (443)
T ss_dssp SSTTSCCEEEEEEEEECTTSCBCTTCHHHHHHHHHHHHH-HTTEEEEEEEEEEEEEECC---------CSSSCCCTTCHH
T ss_pred cccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCeEEEEeeeEEEEecc---------ccCCCCccCCCC
Confidence 8 789999999999999999999999999999998 6899999999999999963 355678899888
Q ss_pred cccCchHHHHHHHHHHHhCCCceeeeecCCCCCceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCeeeeccccCCCCC
Q 005411 560 AYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDI 639 (698)
Q Consensus 560 ~~~~~~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpKP~~~~~ 639 (698)
+.+...+++++|++.|+++||+||++|+|+|||||||++.|.+++++||+++++|++||+||++||++|||||||+.+.+
T Consensus 152 ~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~ 231 (443)
T 4hpp_A 152 AQRAAGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAV 231 (443)
T ss_dssp HHHHTTTHHHHHHHHHHHTTCCEEEEEECSSTTEEEEEECCEETHHHHHHHHHHHHHHHHHHHHHTCEEECSSSSSTTCC
T ss_pred cccchHHHHHHHHHHHHHCCCCeEEeecCCCCCceEEEecCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cccccccccccc-CCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 005411 640 GSGSHVHLSLWQ-NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL 698 (698)
Q Consensus 640 GsG~H~H~Sl~~-~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~ 698 (698)
|||||+|+|||+ +|+|+|. |++++.+||+++++||||||+|+|+|+||++||+|||+
T Consensus 232 GsG~H~h~Sl~~~~G~n~f~--~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P~~NSYk 289 (443)
T 4hpp_A 232 TNGVHLHLSLQHADGSPLLY--EPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYL 289 (443)
T ss_dssp CCCEEEEEEEEETTSCBSSB--CTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSGGGHH
T ss_pred cccceeeeeeecCCCCcccc--CCCCccchhHHHHHHHHHHHHHHHHHHHHhCCCCcchh
Confidence 999999999997 4799999 45667789999999999999999999999999999994
No 3
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=100.00 E-value=1.2e-67 Score=587.69 Aligned_cols=284 Identities=25% Similarity=0.425 Sum_probs=252.3
Q ss_pred hhhhccCCeeEEEEEEecCCCCceeEEEechhhhhHHhhcccccccccc-cccccCCCCCCCCCCCCCccEEEEeecCCc
Q 005411 400 KSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTR 478 (698)
Q Consensus 400 ~~~~~~~~i~~v~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~gd~~L~PD~sT~ 478 (698)
...+++++|+||+++|+|++|++|+|.||+++|.+.+.++|++|+++++ ++. ..+.+|++|+||++|+
T Consensus 9 ~~~~~~~~i~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgss~~g~~-----------~~~~sD~~l~PD~~T~ 77 (473)
T 3ng0_A 9 LKWIQDENIKIIDLKFIDTPGIWQHCSFYYDQLDENSFTEGIPFDGSSIRGWK-----------AINESDMCMVPDPNTA 77 (473)
T ss_dssp HHHHHHTTCCEEEEEEECSSSCEEEEEEEGGGCCGGGGTTCEEEETTSSTTSC-----------CGGGCEEEEEECGGGC
T ss_pred HHHHHhCCCCEEEEEEECCCCCEEEEEEeHHHHHHHHHhCCCccccccccccc-----------cCCCCcEEEEeecCcc
Confidence 3456788999999999999999999999999998744678999987654 111 0246799999999999
Q ss_pred eeccCCCC-ccEEEEEeecC-CCCcCCCChHHHHHHHHHHHHHhcCc--eeeeeeeeEEEEEeeccc-------------
Q 005411 479 WRIPWQKQ-EEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLR------------- 541 (698)
Q Consensus 479 ~~~Pw~~~-~a~V~~d~~~~-dg~p~~~cPR~~L~r~~~~l~~~~G~--~~~~g~E~EF~l~~~~~~------------- 541 (698)
+++||.++ +++|+||++++ +|+|++.|||++|||+++++++ .|+ ++.+|+|+|||||++...
T Consensus 78 ~~~Pw~~~~~a~v~cd~~~~~~g~p~~~~pR~iLkr~~~~~~~-~G~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~ 156 (473)
T 3ng0_A 78 TIDPFCKEPTLSMICSIKEPRTGEWYNRDPRTIAAKAAEYLRG-TGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFADS 156 (473)
T ss_dssp EECTTCSSCEEEEEEEEECTTTSSBCTTCHHHHHHHHHHHHHH-HTSCSEEEEEEEECEEEESEEEEEECSSCEEEEEEC
T ss_pred EECCcCCCCcEEEEEEEeECCCCCCCCCChHHHHHHHHHHHHH-cCCCcceEEEeeeEEEEEeecccccccccccccccc
Confidence 99999986 89999999998 9999999999999999999984 565 899999999999985210
Q ss_pred -C-----------CCCCceeCCCCCcccCccccCchHHHHHHHHHHHhCCCceeeeecCCC-CCceEEecCcCchHHHHH
Q 005411 542 -E-----------GKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAG-KGQFEIALGHTVAAKAAD 608 (698)
Q Consensus 542 -~-----------g~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~GI~ve~~h~E~g-pgQ~Ei~l~p~~~l~aaD 608 (698)
. |..++.|.++++|+...+.+...+++++|++.|+++||+||++|+|+| ||||||++.|.+++++||
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~~~~~~y~~~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~~pGQ~Ei~~~~~~~l~aAD 236 (473)
T 3ng0_A 157 VEGRWNTGREEEGGNLGYKPGYKQGYFPVAPTDTAQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFDKLVNSAD 236 (473)
T ss_dssp TTCGGGTTCCCTTCCCCCCCCTTCCSSCCTTTCCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHH
T ss_pred cccccccccccccCCCCcccCCCccccccCccchhHHHHHHHHHHHHHCCCCeEEeecCcCCCCceEEEccCCCHHHHHH
Confidence 0 011234556778888888888999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCeeeeccccCCCCCCcccccccccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhh
Q 005411 609 NLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILA 688 (698)
Q Consensus 609 ~l~~~r~~ik~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a 688 (698)
+++++|++||+||++||++|||||||+.+.+|||||+|+|||++|+|+|.+ ++ ..+||+++++||||||+|+|+|+|
T Consensus 237 ~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~GSG~H~H~Sl~~~g~n~F~~--~~-~~~lS~~~~~fiaGlL~h~~~l~a 313 (473)
T 3ng0_A 237 NLMIYKYVIKNVAKKYGKTVTFMPKPIFNDNGSGMHVHQSLWKDGQPLFAG--DK-YAGFSQMGLWYIGGILKHAPALLA 313 (473)
T ss_dssp HHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTBS--SS-GGGBCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEcCcccCCCCCCeeEEEEeeccCCccccCC--CC-ccchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999984 33 678999999999999999999999
Q ss_pred hhcCCCCCCC
Q 005411 689 FTAPVPNRLL 698 (698)
Q Consensus 689 ~~~Pt~nSY~ 698 (698)
|++||+|||+
T Consensus 314 ~~~Pt~NSYk 323 (473)
T 3ng0_A 314 FTNPTTNSYK 323 (473)
T ss_dssp HHSCSTTHHH
T ss_pred HhCCCcchhh
Confidence 9999999994
No 4
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00 E-value=4.1e-65 Score=567.77 Aligned_cols=283 Identities=25% Similarity=0.363 Sum_probs=251.7
Q ss_pred hhhccCCeeEEEEEEecCCCCceeEEEechhhhhHHhhcccccccccc-cccccCCCCCCCCCCCCCccEEEEeecCCce
Q 005411 401 SDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTRW 479 (698)
Q Consensus 401 ~~~~~~~i~~v~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~gd~~L~PD~sT~~ 479 (698)
..+++++|+||+++|+|+.|++|+|.||+++|.+.+.+.|++|+.++. ++. ..+.+|++|+||++|++
T Consensus 7 ~~~~~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~fdgss~~g~~-----------~~~~sD~~l~PD~~T~~ 75 (468)
T 1f52_A 7 TMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWK-----------GINESDMVLMPDASTAV 75 (468)
T ss_dssp HHHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCEEEEGGGSTTSC-----------CSSCCEEEEEECGGGCE
T ss_pred HHHHhCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHhhCceeeccccccccc-----------cCCCCCEEEEEecCCcE
Confidence 346677999999999999999999999999998844578999887653 211 12467999999999999
Q ss_pred eccCCC-CccEEEEEeecC-CCCcCCCChHHHHHHHHHHHHHhcCc--eeeeeeeeEEEEEeecc----c----------
Q 005411 480 RIPWQK-QEEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVL----R---------- 541 (698)
Q Consensus 480 ~~Pw~~-~~a~V~~d~~~~-dg~p~~~cPR~~L~r~~~~l~~~~G~--~~~~g~E~EF~l~~~~~----~---------- 541 (698)
++||.+ ++++|+||++++ +|+|++.|||++|||++++++ ++|+ ++.+|+|+|||||++.. .
T Consensus 76 ~~Pw~~~~~~~v~~d~~~~~~G~p~~~~pR~ilk~~~~~l~-~~G~~~~~~~G~E~EFfl~~~~~~~~~~~~~~~~~~~~ 154 (468)
T 1f52_A 76 IDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLR-ATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDI 154 (468)
T ss_dssp ECSSCSSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHH-HHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECT
T ss_pred EccccCCCceEEEEEEEeCCCCCcCCCCHHHHHHHHHHHHH-HcCCCcceEEEeeeEEEEEeccccccCCcccccccccc
Confidence 999987 589999999999 799999999999999999998 6899 89999999999998531 0
Q ss_pred C-----------CCCCceeCCCCCcccCccccCchHHHHHHHHHHHhCCCceeeeecCCCCC-ceEEecCcCchHHHHHH
Q 005411 542 E-----------GKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKG-QFEIALGHTVAAKAADN 609 (698)
Q Consensus 542 ~-----------g~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~GI~ve~~h~E~gpg-Q~Ei~l~p~~~l~aaD~ 609 (698)
+ +..++.|.++++||+..+.+...+++++|++.|+++||+||+.|+|+||| ||||++.|.++++|||+
T Consensus 155 ~~~~~~~~~~~~~~~g~~~~~~~~Y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~apggQ~Ei~~~~~~~l~aAD~ 234 (468)
T 1f52_A 155 EGAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADE 234 (468)
T ss_dssp TCGGGGGCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHH
T ss_pred ccccCCCccccccCCCCCCCCCCCccCCCccccHHHHHHHHHHHHHHCCCCeEEeecCCCCceeEEEeccCCCHHHHHHH
Confidence 0 00123455677899888888999999999999999999999999999996 99999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCeeeeccccCCCCCCcccccccccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhhh
Q 005411 610 LIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAF 689 (698)
Q Consensus 610 l~~~r~~ik~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~ 689 (698)
++++|++||+||++||++|||||||+.+.+|||||+|+|||++|+|+|.+ + +..+||+++++||||||+|+++|+||
T Consensus 235 ~~~~k~~vk~vA~~hGl~atFmpKP~~g~~GSG~H~h~Sl~~~g~Nlf~~--~-~~~~ls~~~~~~iaGll~h~~~l~a~ 311 (468)
T 1f52_A 235 IQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTNLFSG--D-KYAGLSEQALYYIGGVIKHAKAINAL 311 (468)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTBC--S-SGGGBCHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEeCCCCCCCCCCCcceeeccccCCCcccCC--C-CcchHHHHHHHHHHHHHHHHHHhHhH
Confidence 99999999999999999999999999999999999999999999999973 3 44689999999999999999999999
Q ss_pred hcCCCCCCC
Q 005411 690 TAPVPNRLL 698 (698)
Q Consensus 690 ~~Pt~nSY~ 698 (698)
++||+|||+
T Consensus 312 ~ap~~NSYk 320 (468)
T 1f52_A 312 ANPTTNSYK 320 (468)
T ss_dssp HSCSGGGGG
T ss_pred hcCCccchh
Confidence 999999994
No 5
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=100.00 E-value=4.7e-65 Score=570.25 Aligned_cols=288 Identities=27% Similarity=0.392 Sum_probs=252.8
Q ss_pred hhhhhccCCeeEEEEEEecCCCCceeEEEechhhhhHHhhcccccccccccccccCCCCCCCCCCCCCccEEEEeecCCc
Q 005411 399 KKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTR 478 (698)
Q Consensus 399 ~~~~~~~~~i~~v~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~L~PD~sT~ 478 (698)
+...+++++|+||+++|+|++|++|+|.||+++|.+.+.++|++|+++++. +... ...+|++|+||++|+
T Consensus 17 v~~~i~~~~I~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgssi~------G~~~----~~~sD~~l~PD~~T~ 86 (486)
T 4acf_A 17 VFKLAKDEKVEYVDVRFCDLPGIMQHFTIPASAFDKSVFDDGLAFDGSSIR------GFQS----IHESDMLLLPDPETA 86 (486)
T ss_dssp HHHHHHHTTCCEEEEEEECSSSCEEEEEEEGGGCSHHHHHTCEEEEGGGST------TSCC----GGGCEEEEEECGGGC
T ss_pred HHHHHHHCCCcEEEEEEECCCCcEEEEEEEHHHHHHHHHHCCCeeeccccc------cccc----CCCCCEEEEEcccee
Confidence 445678889999999999999999999999999987667899999877642 1000 134699999999999
Q ss_pred eeccCCCCc-cEEEEEeecC-CCCcCCCChHHHHHHHHHHHHHh-cCceeeeeeeeEEEEEeeccc----C---------
Q 005411 479 WRIPWQKQE-EMIMADMHLK-PGEPWEYCPREALRKVSRLLKEE-FNLVLNAGFEIEFYLLKSVLR----E--------- 542 (698)
Q Consensus 479 ~~~Pw~~~~-a~V~~d~~~~-dg~p~~~cPR~~L~r~~~~l~~~-~G~~~~~g~E~EF~l~~~~~~----~--------- 542 (698)
+++||.++. +.|.|+++++ +|+|++.|||++|||++++++++ +|+++.+|+|+|||||+++.. +
T Consensus 87 ~~~Pw~~~~~~~v~~~~~d~~~g~P~~~~pR~iLk~~~~~~~~~g~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~ 166 (486)
T 4acf_A 87 RIDPFRAAKTLNINFFVHDPFTLEPYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAI 166 (486)
T ss_dssp EECSSCSSCEEEEEEEEECTTTCCBCTTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECT
T ss_pred EECCcCCCccEEEEEEEeeCCCCCCCCCCchHHHHHHHHHHHHcCCcceecccceeEEEEeccccccccccCCcccCCcc
Confidence 999999876 4578999874 89999999999999999999854 566899999999999975210 0
Q ss_pred -------------CC--CCceeCCCCCcccCccccCchHHHHHHHHHHHhCCCceeeeecCCCC-CceEEecCcCchHHH
Q 005411 543 -------------GK--EEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGK-GQFEIALGHTVAAKA 606 (698)
Q Consensus 543 -------------g~--~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~GI~ve~~h~E~gp-gQ~Ei~l~p~~~l~a 606 (698)
+. ..+.+.+..+||+..+.+...+++++|++.|+++||+||++|+|+|| |||||++.|.++|+|
T Consensus 167 ~g~~~~~~~~~~~g~p~~~~~~~~~~~y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gp~GQ~Ei~~~~~~~l~a 246 (486)
T 4acf_A 167 SGWWNTGAATEADGSPNRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHA 246 (486)
T ss_dssp TBGGGTTCSBCTTSCBCCCCCBCTTCCSSBCTTTSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHH
T ss_pred ccccCCCCcccCCCCCCCCcccccCCccccCCcchhHHHHHHHHHHHHHhCCceEEeeeeeeeccceeEEeccCcchhhh
Confidence 00 12233445678888888999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCeeeeccccCCCCCCcccccccccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 005411 607 ADNLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSI 686 (698)
Q Consensus 607 aD~l~~~r~~ik~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al 686 (698)
||+++++|++||+||++||+.|||||||+.+.+|||||+|+|||++|+|+|+ |+++..+||+++++||||||+|+|++
T Consensus 247 AD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGll~h~~~l 324 (486)
T 4acf_A 247 ADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLWKDGAPLMY--DETGYAGLSDTARHYIGGLLHHAPSL 324 (486)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEESSB--CTTSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCeEEEeeccccCCCcccceeeeeeccCCCcccc--ccccccccchHHHHHHHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999999999999 56677899999999999999999999
Q ss_pred hhhhcCCCCCCC
Q 005411 687 LAFTAPVPNRLL 698 (698)
Q Consensus 687 ~a~~~Pt~nSY~ 698 (698)
+||++||+|||+
T Consensus 325 ~a~~~PtvNSYk 336 (486)
T 4acf_A 325 LAFTNPTVNSYK 336 (486)
T ss_dssp HHHHSCSTTHHH
T ss_pred eeeecCCCcchh
Confidence 999999999994
No 6
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=100.00 E-value=8.4e-60 Score=514.59 Aligned_cols=363 Identities=29% Similarity=0.430 Sum_probs=307.9
Q ss_pred hHHHHHHhccCCccccCCCCcccCCC---CcchhhcccccCCCCCCCCCcchhHHHHHHHHHhhhCCCC--CHHHHHHHH
Q 005411 3 FEELREVVENIELVDGHAHNIVSLDS---SFPFIQSFSEATGPALSYAPYSLSFKRNLKNIAELYGCDS--SLQAVEEYR 77 (698)
Q Consensus 3 ~~~l~~~i~~~p~iD~H~H~~~~~~~---~~~~~~~~~ea~~~~~~~~~~~l~~~~~~~~l~~~fg~~~--~~~~i~~~~ 77 (698)
+++|+++|+++|||||||||+++.+. .+||+.++|||+++++ .++++.+|. .++++. |||++ |+++||++|
T Consensus 2 ~~~l~~~~~~~~~id~h~h~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~~~~--~~~~~~-fg~~~~~~a~~i~~~~ 77 (376)
T 2qpx_A 2 MDDLSEFVDQVPLLDHHCHFLIDGKVPNRDDRLAQVSTEADKDYP-LADTKNRLA--YHGFLA-LAKEFALDANNPLAAM 77 (376)
T ss_dssp CCCCHHHHHHCCEEEEEECCBBCTTCSCHHHHHHHHTSSCCTTSC-HHHHTTSHH--HHHHHH-HHHHHCSSTTSTTCCC
T ss_pred hHHHHHHHhcCCccccCCccccCcccccccCchHhhhccCCCccc-cccChhhHH--HHHHHh-CCCCCCCCHHHHHHHH
Confidence 45789999999999999999999874 3799999999999876 344555555 455556 99998 788899999
Q ss_pred HHcChhhHHHHHHhhCCcEEEEEecCCC-CCCCCChHHHhhhccC-CCeEEecchHHHHHHHhhCCCCCcccHHHHHHHH
Q 005411 78 RAAGLQSICSICFEAANISAVLIDDGLK-LDKKHGLDWHKSLVPF-VGRILRIERLAEEILDQASPDGSIWTLDVFIETF 155 (698)
Q Consensus 78 ~~l~~~~~~r~ll~~~~v~~~~~d~g~~-~d~~~~~~~h~~~~~~-~~~i~rie~~~~~~~~~~~~~~~~~~~~~~~~al 155 (698)
|++++++++|+||+++||+++|+|||+. +||+++++||+++++. +.+|+|||.+++..... +.+|++|+++|
T Consensus 78 ~~~~~~~~~r~~l~~~~v~~~~~dt~~~~ddp~~~l~~h~~~~~~~~~~~~~ie~~~~~~~~~------~~~~~~~~~~~ 151 (376)
T 2qpx_A 78 NDPGYATYNHRIFGHFHFKELLIDTGFVPDDPILDLDQTAELVGIPVKAIYRLETHAEDFMLE------HDNFAAWWQAF 151 (376)
T ss_dssp CHHHHHHHHHHHHHHTTEEEEEEETTCCCSSBCCCHHHHHHHHTSCEEEEEEHHHHHHHHHTT------CSSHHHHHHHH
T ss_pred HhcCHhHHHHHHHHHCCceEEEecCCCCCCCCCCCHHHHHHhcCcchhheeccchHHHHHhcc------cccHHHHHHHH
Confidence 9999999999999999999999999974 4679999999999864 57999999987755433 34799999999
Q ss_pred HHHHHhhc-ccccceeeeeccccCCCCCCCCCHHHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEec
Q 005411 156 LKQLRSAA-NKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHT 234 (698)
Q Consensus 156 ~~~l~~~~-~~~vgfksi~~y~~gl~~~~~~~~~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~~~e~a~e~glpvq~H~ 234 (698)
+++|+++. .|+||||||.|||+||++.+ +++++|+++|+|++.++ +..++++.+.++++|+++++|+++|||||+|+
T Consensus 152 ~~~l~~~~~~g~~gfksv~~~~~gl~~~~-~~~~~a~~~~~~~~~~~-~~~~~d~~~~p~~l~~~~e~a~e~glpv~iH~ 229 (376)
T 2qpx_A 152 SNDVKQAKAHGFVGFKSIAAYRVGLHLEP-VNVIEAAAGFDTWKHSG-EKRLTSKPLIDYMLYHVAPFIIAQDMPLQFHV 229 (376)
T ss_dssp HHHHHTTTTTTCCCEEECHHHHTCSCCCC-CCHHHHHHHHHHHHHHC-CCSCCCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHCCCceeccceEecCCCCCCC-CCHHHHHHHHHHHHcCC-CCCccchhHhHHHHHHHHHHHHHCCCeEEEEe
Confidence 99999985 69999999999999998544 68999999999999754 56888999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeeecccccCcccHHHHHHHHHHHHhh
Q 005411 235 GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLEL 314 (698)
Q Consensus 235 G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~ 314 (698)
|.++.+.+...++|..+..++++.+||+++||+.| |+|+.+++..++..|||||+|+|| +++..+.++..+++++++.
T Consensus 230 g~~d~~~~~~~~~p~~l~~ll~~~~~P~lkiVl~H-g~~~~~~~~~l~~~~~nvy~d~s~-~~~~~~~~~~~~l~~l~~~ 307 (376)
T 2qpx_A 230 GYGDADTDMYLGNPLLMRDYLKAFTKKGLKVVLLH-CYPYHREAGYLASVFPNLYFDISL-LDNLGPSGASRVFNEAVEL 307 (376)
T ss_dssp SCCCTTSCGGGCCGGGGHHHHHHHGGGTCCEEEEE-CTTCHHHHHHHHHHSTTEEEECTT-HHHHSGGGHHHHHHHHTSS
T ss_pred CCCCCCCCccccCHHHHHHHHhcCCCCCCcEEEEC-CCccHHHHHHHHHhCCCEEEeccc-ccccChhhHHHHHHHHHHh
Confidence 98766666777888899999985569999999999 899999999999999999999998 3333445788899999999
Q ss_pred CCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhH-HHHHHHHHHHHHHHHHhcCCCC
Q 005411 315 APTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE-AIEVAKDIFALNAAQFYKINLG 383 (698)
Q Consensus 315 ~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~e-a~~~~~~Il~~NA~rly~l~~~ 383 (698)
+|.+|||||||++.+|+.+|++++++++.+++++++. .++..+ .++.+++|+++||+|||+++.+
T Consensus 308 ~g~dRiLfGSD~P~~~e~~~~~~~~~~~~l~~l~~~~----~ls~~~~~~~~~~~I~~~NA~rlf~l~~~ 373 (376)
T 2qpx_A 308 APYTRILFASDASTYPEMYGLAARQFKQALVAHFNQL----PFVDLAQKKAWINAICWQTSAKLYHQERE 373 (376)
T ss_dssp SCGGGEECCCCCCBSHHHHHHHHHHHHHHHHHHHHTC----SSCCHHHHHHHHHHHHTHHHHHHTTCGGG
T ss_pred cCCCCEEEECCCCccchhhcccHHHHHHHHHHHHccc----CcchhhcCHHHHHHHHHHhHHHHhCCCCC
Confidence 9999999999988777666778888899998887631 233222 3466999999999999999643
No 7
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00 E-value=1.1e-60 Score=524.40 Aligned_cols=268 Identities=23% Similarity=0.239 Sum_probs=232.3
Q ss_pred hhhccCCeeEEEEEEecCCCCceeEEEechhhhhHHhhcccccccccccccccCCCCCCCCCCCC-CccEEEEeecCCce
Q 005411 401 SDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSG-TGEIRLMPDLSTRW 479 (698)
Q Consensus 401 ~~~~~~~i~~v~~~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~-~gd~~L~PD~sT~~ 479 (698)
..+++++|+||+++|+|++|++|+|+||+++|++ + .+|++|+.++ . ..+.. ..+ .+|++|+||++|++
T Consensus 7 ~~l~~~~i~~v~~~~~D~~G~~r~k~ip~~~~~~-~-~~g~~~~gs~-~----~~~~~----~~~~~sD~~l~PD~~T~~ 75 (421)
T 2j9i_A 7 TMLNEHAAAFVRFEATDAAGASRSKSIPAQFFEK-V-IHARGYLEDG-E----VNAGA----AGAAASDIVLMPELSTAA 75 (421)
T ss_dssp HHHHHTTCSEEEEEEECSSSCEEEEEEEGGGCCT-T-HHHHCEEECG-G----GSTTT----CCTTCCCEEEEECSSCCE
T ss_pred HHHHhCCCCEEEEEEECCCCCEEEEEEEHHHHHH-h-hcCCeeeccc-C----ccccc----ccCCCCCEEEEEecCceE
Confidence 3466779999999999999999999999999954 3 3567776532 0 11110 012 37999999999999
Q ss_pred eccC-CCCccEEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCc--eeeeeeeeEEEEEeecccCCCCCceeCCCCCcc
Q 005411 480 RIPW-QKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYC 556 (698)
Q Consensus 480 ~~Pw-~~~~a~V~~d~~~~dg~p~~~cPR~~L~r~~~~l~~~~G~--~~~~g~E~EF~l~~~~~~~g~~~~~p~~~~~~~ 556 (698)
++|| .+++++|+|| ||+|++.|||++|||++++++ ++|+ ++++|+|+|||||++... +....+||
T Consensus 76 ~~Pw~~~~~a~v~cd----dG~P~~~~pR~iLk~~~~~~~-~~G~~d~~~~g~E~EF~l~~~~~~-------~~~~p~y~ 143 (421)
T 2j9i_A 76 VAAAAAAATAAVICD----GGAAAAASPRYIARAALAQLQ-AAGAAAGLLSAFIADFCIFGVPEV-------INSKTISF 143 (421)
T ss_dssp ECTTSSSSEEEEEEE----EESSCSCCHHHHHHHHHHHHH-HTTSCSEECCEECCCCEEESCCEE-------EECSSCEE
T ss_pred EcCcCCCCeEEEEcC----CCCCCCCChHHHHHHHHHHHH-hcCCccCceEEeeeEEEEEecCCC-------CCCCCCcC
Confidence 9999 7889999999 799999999999999999998 6899 999999999999986210 11122466
Q ss_pred cCccccCchHHHHHHHHHHHhCCCceeeeecCCCCCceEEecCcCc-hHHHHHHHHHHHHHHHHHHHHcCCeeeeccccC
Q 005411 557 STAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVARKHGLLATFVPKFA 635 (698)
Q Consensus 557 ~~~~~~~~~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~p~~-~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpKP~ 635 (698)
+..+.+...+++++|++.|+ +||+||+.|+|+|||||||++.|.+ ++++||+++++|++||+||++||++|||||||
T Consensus 144 ~~~~~~~~~~~~~~i~~~l~-~Gi~ve~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~atFmpKP- 221 (421)
T 2j9i_A 144 PASTTAAAADQPQEAAAGGA-AGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIASAAAAA- 221 (421)
T ss_dssp EECCCTTCTTGGGSCCTTCC-CSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEECCTTS-
T ss_pred CCCcccchhHHHHHHHHHHh-CCCCeEEeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEEEcCCc-
Confidence 66666778899999999999 9999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCCCccccccccccc---CCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 005411 636 LDDIGSGSHVHLSLWQ---NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL 698 (698)
Q Consensus 636 ~~~~GsG~H~H~Sl~~---~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~ 698 (698)
+.+|||| +|+|||+ +|+|+|.+ ++++ +||+++++||||||+|+++++||++||+|||+
T Consensus 222 -~~~GSG~-~h~Sl~~~~~~G~nlf~~--~~~~-~ls~~~~~~iaGil~h~~~l~a~~~p~~NSYk 282 (421)
T 2j9i_A 222 -AAAAAGA-GSHSIWDVGAAGTNAFAG--ASGA-RATLTGAKWLAGLLAAAAAAAAAAAAAAAAAA 282 (421)
T ss_dssp -STTSCCC-BCCEEECEEETTEESSCS--SSGG-GCCHHHHHHHHHHHHHHHHHHHHHTCSHHHHH
T ss_pred -CCCCCce-EEEeccccCCCCceeecC--CCCc-cccHHHHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 8899999 9999997 69999984 3344 89999999999999999999999999999994
No 8
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-57 Score=487.82 Aligned_cols=266 Identities=17% Similarity=0.225 Sum_probs=220.7
Q ss_pred hccCCeeEEEEEEecCCCCceeEEEechhhhhHHhh-cccccccccccccccCCCCCCCCCCCCCccEEEEeecCCceec
Q 005411 403 AFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTK-YGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (698)
Q Consensus 403 ~~~~~i~~v~~~~~D~~G~~R~k~vp~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~L~PD~sT~~~~ 481 (698)
+++.+|++|++.|+|.+|++|+|++|+++|.+.+.+ .+++|++++.++. ..+.+|++|+|| |++++
T Consensus 18 l~~~~i~~v~~~~~D~~G~lR~K~~~~~~~~~~~~~~~~~~fDGss~g~~-----------~~~~sD~~l~Pd--t~~~~ 84 (370)
T 3fky_A 18 LDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFDGSSTNQA-----------PGHDSDIYLKPV--AYYPD 84 (370)
T ss_dssp ---CCCEEEEEEEECSSSCEEEEEEEESSCCCSGGGSCCEEECGGGTTSS-----------CCCC--EEEEEE--EEEEC
T ss_pred cccCCeEEEEEEEEcCCCCeEEEEEECccccchHHhCCccccCCcccccc-----------cCCCCCeeEeee--EEEEc
Confidence 457889999999999999999999999988765422 2666766654321 125689999999 89999
Q ss_pred cCCCC-ccEEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCceeeeeeeeEEEEEeeccc-CCC-CCceeCCCCCcccC
Q 005411 482 PWQKQ-EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLR-EGK-EEWVPIDFTPYCST 558 (698)
Q Consensus 482 Pw~~~-~a~V~~d~~~~dg~p~~~cPR~~L~r~~~~l~~~~G~~~~~g~E~EF~l~~~~~~-~g~-~~~~p~~~~~~~~~ 558 (698)
||.++ +++|+||++++||+|++.|||++|||++++++ |+++++|+|+|||||+.... .+. .+..|.++++||..
T Consensus 85 Pw~~~~~a~vlcd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~p~~~~p~~~g~yy~~ 161 (370)
T 3fky_A 85 PFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK---DEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCG 161 (370)
T ss_dssp TTTCTTCEEEEEEEECTTSSBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEECTTSSBTTCCTTSBCSCSSSCTTC
T ss_pred CCCCCCeEEEEEEEEcCCCCCCCCCHHHHHHHHHHHhc---CCCceEEeeeEEEEEccCCCcccCCCCCccCCCCccccc
Confidence 99986 79999999999999999999999999999874 89999999999999986311 111 12256677788765
Q ss_pred ccccC--chHHHHHHHHHHHhCCCceeeeecCCCCCceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCeeeeccccCC
Q 005411 559 AAYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFAL 636 (698)
Q Consensus 559 ~~~~~--~~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpKP~~ 636 (698)
.+... ..++++++.++|+++||+||++|+|+|||||||++.|.+++++||+++++|++||+||++||++|||||||+.
T Consensus 162 ~~~~~~~~~~i~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~K~~vk~vA~~~G~~ATFmpKP~~ 241 (370)
T 3fky_A 162 VGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLK 241 (370)
T ss_dssp CSTTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHTTTCEEECCSCSSS
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCCeeeeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCcEEEEcccccC
Confidence 44333 5899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCcccccccccccCCccccccCCCCCCCCCcHHHHHHHHHHH-HHHHHhhhhhcCCCCCCC
Q 005411 637 D-DIGSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVL-HHLSSILAFTAPVPNRLL 698 (698)
Q Consensus 637 ~-~~GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL-~h~~al~a~~~Pt~nSY~ 698 (698)
+ .+|||||+|+|||+... +++++. .++||+||+ +|+++|++|+ +|||+
T Consensus 242 gd~~GSG~H~H~Sl~~~~~----------~~g~~~-~~~~i~gl~~~h~~~i~a~~---~nSYk 291 (370)
T 3fky_A 242 GDWNGAGCHANVSTKEMRQ----------PGGTKY-IEQAIEKLSKRHAEHIKLYG---SDNDM 291 (370)
T ss_dssp SSSCCCBEEEEEECHHHHS----------SSTHHH-HHHHHHHHHHTHHHHHHSSC---TTGGG
T ss_pred CCCCcccceeeeccccccC----------CCCHHH-HHHHHHHHHHHhHHHHHHHc---cchhh
Confidence 4 79999999999996211 123443 489999999 9999999996 79995
No 9
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=100.00 E-value=9.4e-57 Score=487.30 Aligned_cols=269 Identities=19% Similarity=0.244 Sum_probs=224.1
Q ss_pred hhhhhhcc-CCeeEEEEEEecCCC-CceeEEEechhhhhHHhhc--ccccccccccccccCCCCCCCCCCCCCccEEEEe
Q 005411 398 LKKSDAFE-SDVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTKY--GVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMP 473 (698)
Q Consensus 398 ~~~~~~~~-~~i~~v~~~~~D~~G-~~R~k~vp~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~L~P 473 (698)
+..++-.+ .++.+|+++|+|++| ++|+|.+|+++|.+.+ +. |++|+.++..+. ..+.+|++|+|
T Consensus 33 l~~~l~~~~~~~~~v~~~~~D~~G~~~R~K~ip~~~~~~~~-~~~p~~~~dgss~~~~-----------~~~~sD~~l~P 100 (384)
T 2ojw_A 33 KQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCV-EELPEWNFDGSSTLQS-----------EGSNSDMYLVP 100 (384)
T ss_dssp HHHHHTSCCCSCEEEEEEEECTTSSCEEEEEEEESSCCSSG-GGSCCEEEEGGGTTSS-----------BTTBCEEEEEE
T ss_pred HHHHHhCCCCCcEEEEEEEECCCCCeeeEEEEEHHHhhhhH-hhCccccccCcccccc-----------cCCCCcEEEEe
Confidence 33344443 459999999999999 9999999999998753 44 666665543311 13568999999
Q ss_pred ecCCceeccCCC-CccEEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCceeeeeeeeEEEEEeecccC-CCC-CceeC
Q 005411 474 DLSTRWRIPWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRE-GKE-EWVPI 550 (698)
Q Consensus 474 D~sT~~~~Pw~~-~~a~V~~d~~~~dg~p~~~cPR~~L~r~~~~l~~~~G~~~~~g~E~EF~l~~~~~~~-g~~-~~~p~ 550 (698)
| |++++||.+ ++++|+||++++||+|++.|||++|||++++++ |+++.+|+|+|||||++.... +.. ...|.
T Consensus 101 D--t~~~~Pw~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~~~~g~p~ 175 (384)
T 2ojw_A 101 A--AMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVS---NQHPWFGMEQEYTLMGTDGHPFGWPSNGFPG 175 (384)
T ss_dssp E--EEEECTTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEEC-CCSBTTCCTTSCCS
T ss_pred e--EEEECCCCCCCeEEEEEEEECCCCCCCCcCHHHHHHHHHHHHh---CCEEEEEeeeEEEEEccCCCcccccCCCccC
Confidence 9 899999986 589999999999999999999999999999985 799999999999999873211 111 11355
Q ss_pred CCCCcccCcccc--CchHHHHHHHHHHHhCCCceeeeecCCCCCceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCee
Q 005411 551 DFTPYCSTAAYD--AVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLA 628 (698)
Q Consensus 551 ~~~~~~~~~~~~--~~~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~A 628 (698)
++++|+...+.+ ..++++++|++.|+++||+||++|+|+|||||||++.|.+++++||+++++|++||+||++||++|
T Consensus 176 ~~g~y~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~Gl~a 255 (384)
T 2ojw_A 176 PQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIA 255 (384)
T ss_dssp CSSSCTTCCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCCCCCcccccchHHHHHHHHHHHHHHHHCCCCeEeeecCCCCcceEEEcCCCcHHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 677787766555 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCC-CCCccccccccccc----CCccccccCCCCCCCCCcHHHHHHHHHH-HHHHHHhhhh-hcCCCCCCC
Q 005411 629 TFVPKFALD-DIGSGSHVHLSLWQ----NGENVFMASDSSSKHGMSSVGEKFMAGV-LHHLSSILAF-TAPVPNRLL 698 (698)
Q Consensus 629 TFmpKP~~~-~~GsG~H~H~Sl~~----~g~n~f~~~d~~~~~~lS~~~~~fiaGl-L~h~~al~a~-~~Pt~nSY~ 698 (698)
||||||+.+ .+|||||+|+|||+ +|.|+ .+++++|+ ++|+++|++| .+|++|||+
T Consensus 256 TFmpKP~~~d~~GSG~H~H~Sl~~~~~~~g~n~---------------f~~~~~gl~~~h~~~i~a~~p~~~~nsyk 317 (384)
T 2ojw_A 256 TFDPKPIPGNWNGAGCHTNFSTKAMREENGLKY---------------IEEAIEKLSKRHQYHIRAYDPKGGLDNAR 317 (384)
T ss_dssp ECCSCSSCSSSCCCBEEEEEECHHHHSTTTHHH---------------HHHHHHHHHTCHHHHHHHSSTTTTTTGGG
T ss_pred EEeccccCCCCCCCeeeEEeehhhhcCCCchhH---------------HHHHHHHHHHHHHHHheEeccCCCCCchh
Confidence 999999987 59999999999974 23343 46789999 9999999999 444599994
No 10
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8
Probab=100.00 E-value=8e-57 Score=491.76 Aligned_cols=360 Identities=16% Similarity=0.138 Sum_probs=296.6
Q ss_pred HHHHHHhccCCccccCCCCcccCCC-Ccchhhcc-------------------------cccCCC----C-CCCCCcchh
Q 005411 4 EELREVVENIELVDGHAHNIVSLDS-SFPFIQSF-------------------------SEATGP----A-LSYAPYSLS 52 (698)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~~-~~~~~~~~-------------------------~ea~~~----~-~~~~~~~l~ 52 (698)
.+|++.++++||||+|||....... +.+|+.++ .+++.. + .+.+++++|
T Consensus 27 ~~Ly~~~~~~PIiD~HcHl~p~~i~~~~~F~ni~e~wl~gDHYkwr~mRa~Gv~e~~itg~~~~~ekf~~~a~~~~~~~G 106 (463)
T 1j5s_A 27 VRLFNEVKDLPIVDPHNHLDAKDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITGSRSNKEKWLALAKVFPRFVG 106 (463)
T ss_dssp HHHHHHHTTSCEEESCCCCCHHHHHHTCCCSCHHHHHTTTCHHHHHHHHHTTCCGGGTTSSSCHHHHHHHHHHHGGGGTT
T ss_pred HHHHHHhccCCeecCccCCCHHHhccccCcccHHHHhccCchHHHHHHhhcCCChhhhcCCCCHHHHHHHHHhhhHHhcC
Confidence 4688888999999999998876421 24455554 222210 1 124444444
Q ss_pred ---HHHHHHHHHhhhCCCC-----CHHHHHHHHHHcChhhHHHHHHhhCCcEEEEEecCCCCCCCCChHHHhhhc-----
Q 005411 53 ---FKRNLKNIAELYGCDS-----SLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLV----- 119 (698)
Q Consensus 53 ---~~~~~~~l~~~fg~~~-----~~~~i~~~~~~l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~----- 119 (698)
|.|++++|+++||+++ |+++||++||++.+++++|+||+++||+++|| |+||+++++||++++
T Consensus 107 nply~W~hlel~~~FGi~~~l~~~ta~~i~~~~~e~l~~~~~r~ll~~snV~~v~t----TddP~D~Le~h~~l~~~~~~ 182 (463)
T 1j5s_A 107 NPTYEWIHLDLWRRFNIKKVISEETAEEIWEETKKKLPEMTPQKLLRDMKVEILCT----TDDPVSTLEHHRKAKEAVEG 182 (463)
T ss_dssp SHHHHHHHHHHHHHSCCCCCCSHHHHHHHHHHHHHHSTTCCHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhchhhhHHHHHHHcCCEEEEe----CCCCCCchHHHHHHhcCCCC
Confidence 7899999999999997 89999999999558899999999999999999 889999999999942
Q ss_pred ----c--CCCeEEecchHHH-HHHHhhC--CCCCcccHHHHHHHHHHHHHhhcccccceeee--eccccCC--CCCCCCC
Q 005411 120 ----P--FVGRILRIERLAE-EILDQAS--PDGSIWTLDVFIETFLKQLRSAANKIVGLKSI--AAYRSGL--EINPHVT 186 (698)
Q Consensus 120 ----~--~~~~i~rie~~~~-~~~~~~~--~~~~~~~~~~~~~al~~~l~~~~~~~vgfksi--~~y~~gl--~~~~~~~ 186 (698)
+ |||++++||.... ++++++. +|.++.+|++|++||++|+++| +++ .+++||| +..++++
T Consensus 183 ~~v~P~~RPD~~~~ie~~~f~~~v~~L~~~sg~~i~s~~~~~~Al~~r~~~F-------~~~G~~asdhgl~~~~~~~~s 255 (463)
T 1j5s_A 183 VTILPTWRPDRAMNVDKEGWREYVEKMGERYGEDTSTLDGFLNALWKSHEHF-------KEHGCVASDHALLEPSVYYVD 255 (463)
T ss_dssp CEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHH-------HTTTCCEEEEEESSCCCCCCC
T ss_pred ceeeeccCcchhcccCchhHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHH-------HHcCcEEEccCCCcccCCCCC
Confidence 1 7899999996644 6777763 6667889999999999999965 444 4568998 6555589
Q ss_pred HHHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCCCC-------------CCCCCCCCC-c--cc
Q 005411 187 KKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGD-------------KDLDLRLSN-P--LH 250 (698)
Q Consensus 187 ~~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~-------------~~~~~~~~~-p--~~ 250 (698)
++|++++|+|+++++.....+...+..++++.+.++|.|+|||||+|+|+++ +|+|..... + ..
T Consensus 256 ~~e~~~if~k~l~g~~ls~~e~~~~~~~ll~~l~~~~~e~g~~mQlH~G~~Rn~n~~~~~~~G~d~G~D~~~~~~~~~~~ 335 (463)
T 1j5s_A 256 ENRARAVHEKAFSGEKLTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAEG 335 (463)
T ss_dssp HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECSCSHHHHHHTCSSSSCCEECSCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEeecCCCCCCHHHHHHhCCCCCCCCccccchHHHH
Confidence 9999999999998754455566778888899999999999999999999843 344443222 2 24
Q ss_pred hHHHHhhcCCCC-cEEEEecCCCcchHHHHHHHHhCCeeeeecccccCcccHHHHHHHHHHHHhhCCCCcEE-EecCCCC
Q 005411 251 LRAILEDKRFSK-CRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYA 328 (698)
Q Consensus 251 L~~l~~~~~~P~-~~~vllH~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~ 328 (698)
|..+++ ++++ .|+|+.|+.-.+.+++++||++|||||+|.+|||++. +.||++++++++|++|++|++ |+||+|+
T Consensus 336 L~~lL~--~~~~~~k~iLy~Lnp~~~~~la~lag~Fp~vq~g~~WWf~d~-~~gm~~~l~~l~e~~~lskfvGmlTDsRs 412 (463)
T 1j5s_A 336 LRYFLN--EFDGKLKIVLYVLDPTHLPTISTIARAFPNVYVGAPWWFNDS-PFGMEMHLKYLASVDLLYNLAGMVTDSRK 412 (463)
T ss_dssp HHHHHH--HSTTTSCEEEEESSGGGHHHHHHHHHHCTTEEECCCCSTTCS-HHHHHHHHHHHHTTSCGGGCCCCCCCCSS
T ss_pred HHHHHH--hcccCCCeEEEecCHhhHHHHHHHHccCCccccCCchhhcCC-HHHHHHHHHHHHHhcchhccccccccchH
Confidence 888888 6776 7777777733378999999999999999999999865 899999999999999999999 9999999
Q ss_pred Cccchh-hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhc
Q 005411 329 SPETYF-LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (698)
Q Consensus 329 ~P~~~~-~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (698)
| ++| ++|++|||+||++|++||++|++|.+++++++++|+|+||+++|+
T Consensus 413 f--LsY~~rhe~fRRiLc~~Lg~~Ve~G~~p~~~~~~iv~~I~y~NA~~~f~ 462 (463)
T 1j5s_A 413 L--LSFGSRTEMFRRVLSNVVGEMVEKGQIPIKEARELVKHVSYDGPKALFF 462 (463)
T ss_dssp T--THHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHC
T ss_pred H--hhccHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHhC
Confidence 9 478 999999999999999999999999888999999999999999996
No 11
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0
Probab=100.00 E-value=2.9e-55 Score=473.94 Aligned_cols=362 Identities=15% Similarity=0.169 Sum_probs=306.9
Q ss_pred HHHHH-HhccCCccccCCCCcccC-----------------C---------CCcchhhccc-ccCCCC----C-CCCCcc
Q 005411 4 EELRE-VVENIELVDGHAHNIVSL-----------------D---------SSFPFIQSFS-EATGPA----L-SYAPYS 50 (698)
Q Consensus 4 ~~l~~-~i~~~p~iD~H~H~~~~~-----------------~---------~~~~~~~~~~-ea~~~~----~-~~~~~~ 50 (698)
.+|++ .+.++||||-|||---.+ | .+.|.+.+++ ++++.. . +..|..
T Consensus 20 r~LYh~~a~~lPIiDyH~Hl~P~~iaen~~F~nit~lwl~gDHYkwR~mrs~Gv~e~~itG~~a~~~ekf~~~A~t~p~~ 99 (473)
T 3iac_A 20 RTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKETSDYEKYMAWANTVPKT 99 (473)
T ss_dssp HHHHHHTTTTSCEEECSCCCCHHHHHHTCCCSCHHHHHHSSCSHHHHHHHHTTCCGGGTTCTTSCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhcCCEECCCCCCCHHHhccCCCCCCHHHHhccCchHHHHHHHHcCCCHHHccCCCCChHHHHHHHHHHHHHh
Confidence 46884 899999999999965431 1 2356777766 554321 1 133333
Q ss_pred h---hHHHHHHHHHhhhCCCC------CHHHHHHHHHH-c-ChhhHHHHHHhhCCcEEEEEecCCCCCCCCChHHHhhhc
Q 005411 51 L---SFKRNLKNIAELYGCDS------SLQAVEEYRRA-A-GLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLV 119 (698)
Q Consensus 51 l---~~~~~~~~l~~~fg~~~------~~~~i~~~~~~-l-~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~ 119 (698)
+ .|.|+|+||+++|||++ ||++||+++|+ | ++++.+|.||+++||++||| ||||+|+|+||++++
T Consensus 100 ~gnPly~W~hleL~r~FGi~~~~L~~~tA~~I~d~~n~~L~~~~f~~r~L~~~~nVe~v~T----TDDP~D~L~~H~~i~ 175 (473)
T 3iac_A 100 LGNPLYHWTHLELRRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGT----TDDPIDSLEYHRQIA 175 (473)
T ss_dssp TTSHHHHHHHHHHHTTTCCCSCCCSHHHHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCHHHHHHHCCcEEEEe----CCCccccHHHHHHHH
Confidence 3 38899999999999986 99999999999 5 89999999999999999999 999999999999886
Q ss_pred c------------CCCeEEecchHHH-HHHHhhC--CCCCcccHHHHHHHHHHHHHhhcccccceeeeecc--ccCCCCC
Q 005411 120 P------------FVGRILRIERLAE-EILDQAS--PDGSIWTLDVFIETFLKQLRSAANKIVGLKSIAAY--RSGLEIN 182 (698)
Q Consensus 120 ~------------~~~~i~rie~~~~-~~~~~~~--~~~~~~~~~~~~~al~~~l~~~~~~~vgfksi~~y--~~gl~~~ 182 (698)
+ |||+++.||...+ +++++|. +|.+|.+|++|++||++|+++ |++.||. +||++..
T Consensus 176 ~~~~f~~~VlPtfRPD~a~~i~~~~f~~yv~~L~~~sg~~i~~~~~ll~AL~~R~~~-------F~~~Gcr~sDHgl~~~ 248 (473)
T 3iac_A 176 ADDSIDIEVAPSWRPDKVFKIELDGFVDYLRKLEAAADVSITRFDDLRQALTRRLDH-------FAACGCRASDHGIETL 248 (473)
T ss_dssp HCTTCCSEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHH-------HHHTTCCEEEEEESSC
T ss_pred hcCCCCceEeeccCCccccCCCchhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH-------HHHcCcEehhcCCccc
Confidence 3 8999999998766 8888884 788899999999999999996 5555555 6999865
Q ss_pred CC---CCHHHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCC------------C-CCCCCCC--
Q 005411 183 PH---VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLDLR-- 244 (698)
Q Consensus 183 ~~---~~~~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~~~e~a~e~glpvq~H~G~------------G-~~~~~~~-- 244 (698)
.+ ++.+||+++|+|+++++.....+...+..++++.+.+++.|.||+||+|.|+ | |+|.|..
T Consensus 249 ~~~~~~s~~e~~~if~k~l~G~~ls~~e~~~f~~~~l~~la~~~~e~gwvmQlH~Ga~Rn~n~~~f~~lG~D~G~D~~~d 328 (473)
T 3iac_A 249 RFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHIGAIRNNNTRMFRLLGPDTGFDSIGD 328 (473)
T ss_dssp CCCCCCCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECCCCHHHHHHHCSSSSCCEECC
T ss_pred ccCCCCCHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHCCCeeeeecccccCCCHHHHHHhCCCCCCCCCCC
Confidence 53 5789999999999987655666778888899999999999999999999998 5 4666543
Q ss_pred --CCCcc--chHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCe------eeeecccccCcccHHHHHHHHHHHHhh
Q 005411 245 --LSNPL--HLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ------VYLDFGLAIPKLSVQGMISSIKELLEL 314 (698)
Q Consensus 245 --~~~p~--~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pn------Vy~d~s~~~~~~~~~g~~~~l~~~le~ 314 (698)
++.++ +|+.+-+.+++|+++++.+++. +.++++.|+++||+ ||++.+|||++. ++||+++++.+.++
T Consensus 329 ~~~~~~L~~lLd~~~~~~~LpktILy~Lnp~--~n~~latlag~F~~~~~~gkvq~G~~WWFnD~-~~GM~rq~~~l~~~ 405 (473)
T 3iac_A 329 NNISWALSRLLDSMDVTNELPKTILYCLNPR--DNEVLATMIGNFQGPGIAGKVQFGSGWWFNDQ-KDGMLRQLEQLSQM 405 (473)
T ss_dssp CCCHHHHHHHHHHHHTTTCCCEEEEEESSGG--GHHHHHHHGGGSCCTTSTTSEEECCCCGGGCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCCCeeeEEeCCcc--chHHHHHHHhhcCCCCcCceeEecCcccccCC-HHHHHHHHHHHHHh
Confidence 33333 5666666678999999999997 67889999999999 999999999875 99999999999999
Q ss_pred CCCCcEE-EecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHH--HHHHHHHHHHHHHHHhcCC
Q 005411 315 APTKKVM-FSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEA--IEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 315 ~~~~kil-fgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea--~~~~~~Il~~NA~rly~l~ 381 (698)
++++|++ |.||+|+|.+ |++|++|||+||++|++||++|++|.+++ .+++++|+|+||+++|+++
T Consensus 406 g~l~~fvGmltDSRsFlS--y~RHeyfRRilc~~lg~~Ve~G~~p~D~~~l~~iv~dI~y~nak~yF~~~ 473 (473)
T 3iac_A 406 GLLSQFVGMLTDSRSFLS--YTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK 473 (473)
T ss_dssp SCGGGCCCCCCCCSCTTT--THHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHTHHHHHHTSCC
T ss_pred hhhhcccccccchHhhhh--hHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHhHHHHHhCCC
Confidence 9999999 9999999985 59999999999999999999999999998 9999999999999999973
No 12
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=100.00 E-value=2.3e-55 Score=472.43 Aligned_cols=261 Identities=20% Similarity=0.234 Sum_probs=220.8
Q ss_pred cCCeeEEEEEEecCCC-CceeEEEechhhhhHHhhc--ccccccccccccccCCCCCCCCCCCCCccEEEEeecCCceec
Q 005411 405 ESDVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTKY--GVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (698)
Q Consensus 405 ~~~i~~v~~~~~D~~G-~~R~k~vp~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~~~~~~~~~gd~~L~PD~sT~~~~ 481 (698)
..++.+|+++|+|+.| .+|+|.+|++.+.+.+ +. |++|+.+++++. ....+|++|+|| |++++
T Consensus 15 ~~~~~~v~~~~vD~~g~~~r~k~~~~~~~~~~~-~~~~g~~fdgss~~~~-----------~~~~sD~~l~PD--t~~~~ 80 (356)
T 2d3a_A 15 TTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDP-SKLPKWNYDGSSTGQA-----------PGEDSEVILYPQ--AIFKD 80 (356)
T ss_dssp TCSCEEEEEEEECTTSSCEEEEEEEESSCCCCG-GGSCCEEEEGGGTTSS-----------CSSSCEEEEEEE--EEEEC
T ss_pred CCCeEEEEEEEEcCCCCcccceEEECCcchhhH-hhcCcceecccccccc-----------cCcCCcEEEEEE--EEEEC
Confidence 5678999999999999 9999999999887654 44 788887664321 123579999999 89999
Q ss_pred cCCC-CccEEEEEeecCCCCcCCCChHHHHHHHHHHHHHhcCceeeeeeeeEEEEEeecccCCCCC----ceeCCCCCcc
Q 005411 482 PWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEE----WVPIDFTPYC 556 (698)
Q Consensus 482 Pw~~-~~a~V~~d~~~~dg~p~~~cPR~~L~r~~~~l~~~~G~~~~~g~E~EF~l~~~~~~~g~~~----~~p~~~~~~~ 556 (698)
||.+ ++++|+||++++||+|++.|||++|||++++++ +.|+++.+|+|+|||||++.. +.... -.|.++++||
T Consensus 81 P~~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~-~~g~~~~~G~E~EF~lf~~~~-~~~~~~~~~g~p~~~g~y~ 158 (356)
T 2d3a_A 81 PFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPE-VAAEEPWYGIEQEYTLLQKDT-NWPLGWPIGGFPGPQGPYY 158 (356)
T ss_dssp TTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHSHH-HHHHCCEEEEEEEEEEEETTT-CCBTTSCTTSBCSCSSSCT
T ss_pred CcCCCCceEEEEEEECCCCCCCCCCHHHHHHHHHHHHH-hcCCeeEEecceEEEEEecCC-CcccccccCCCCCCCCCcC
Confidence 9986 589999999999999999999999999999998 579999999999999998631 11101 1355677888
Q ss_pred cCccccC--chHHHHHHHHHHHhCCCceeeeecCCCCCceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCeeeecccc
Q 005411 557 STAAYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKF 634 (698)
Q Consensus 557 ~~~~~~~--~~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpKP 634 (698)
...+.+. ..+++++|++.|+++||+||++|+|+|||||||++.|.+++++||+++++|++||+||++||++|||||||
T Consensus 159 ~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP 238 (356)
T 2d3a_A 159 CGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKP 238 (356)
T ss_dssp TCCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEECCSCS
T ss_pred cCcccchHHHHHHHHHHHHHHHHCCCCEEEeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEECCCc
Confidence 7666654 68999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCccccccccccc----CCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 005411 635 AL-DDIGSGSHVHLSLWQ----NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNRLL 698 (698)
Q Consensus 635 ~~-~~~GsG~H~H~Sl~~----~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~nSY~ 698 (698)
+. +.+|||||+|+|||+ +|.|+|.. ..-+++|+|+++|+||+ +|||+
T Consensus 239 ~~~d~~GSG~H~H~Sl~~~~~~~g~~~f~~--------------~~~~l~l~h~~~l~a~~---~nSYk 290 (356)
T 2d3a_A 239 IPGDWNGAGAHTNYSTESMRKEGGYEVIKA--------------AIEKLKLRHKEHIAAYG---EGNER 290 (356)
T ss_dssp SCSSSCCCBEEEEEECTTTSSTTHHHHHHH--------------HHHHHHHTHHHHHTTSC---TTHHH
T ss_pred cCCCCCCCcceEEechhhhccCCCHHHHHH--------------HHHHHHHHHHHHHHhHc---cChHH
Confidence 97 679999999999964 35566651 11234899999999993 58884
No 13
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=100.00 E-value=3.1e-54 Score=475.00 Aligned_cols=365 Identities=15% Similarity=0.143 Sum_probs=295.9
Q ss_pred HHHHHHhccCCccccCCCCcccC---C-----------------------CCcchhh--c-----ccccCCC--------
Q 005411 4 EELREVVENIELVDGHAHNIVSL---D-----------------------SSFPFIQ--S-----FSEATGP-------- 42 (698)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~---~-----------------------~~~~~~~--~-----~~ea~~~-------- 42 (698)
.+|++.++++||||-|||-.-.. + .+.|.+- | +.+++..
T Consensus 26 ~~Ly~~a~~~PIiDyH~Hl~p~~iaen~~f~~i~elwl~gdHYkwr~mRa~Gv~e~~~~i~~~~gtg~~~~~ekf~~~a~ 105 (497)
T 2q01_A 26 RGLYALVKDLPIISPHGHTDPSWFATNAPFQDATDLLLAPDHYLFRMLYSQGVSLDALKVRSKAGVPDTDPREAWRVFAS 105 (497)
T ss_dssp HHHHHTTTTSCEEECSCCCCTHHHHHCCCCCCHHHHTTSSCHHHHHHHHTTTCCSTTTTCCBTTBSCSSCHHHHHHHHHH
T ss_pred HHHHHHHhCCCeecCccCCCHHHHhhcCCCCCHHHHhccCcHHHHHHHHHcCCChhhhcccccccCCCCCHHHHHHHHHH
Confidence 37888889999999999976442 1 1122222 2 2333211
Q ss_pred CCCCCCcchhHHHHHHHHHhhhCCCC-----CHHHHHHHHHH-c-ChhhHHHHHHhhCCcEEEEEecCCCCCCCCChHHH
Q 005411 43 ALSYAPYSLSFKRNLKNIAELYGCDS-----SLQAVEEYRRA-A-GLQSICSICFEAANISAVLIDDGLKLDKKHGLDWH 115 (698)
Q Consensus 43 ~~~~~~~~l~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~-l-~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h 115 (698)
.+..+..+--|.|+|++|+++|||++ |+++||++||+ + .+++.+|+||+++||++||| |+||+++++||
T Consensus 106 ~~~~~~gnPly~W~hleL~~~FGi~~~l~~~ta~~i~~~~ne~l~~~~~~~R~Ll~~snV~~v~T----TddP~D~Le~h 181 (497)
T 2q01_A 106 HFYLFRGTPSWVWLNHVFSQVFGFTEFLEASNADDYFDRITAALATDAFRPRALFDRFNIETLAT----TEGPHESLQHH 181 (497)
T ss_dssp TGGGGTTSHHHHHHHHHHHHTTCCCBCCCTTTHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTSCCHHH
T ss_pred HhHHhcCCHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhcCccchHHHHHHHcCCEEEEe----CCCCCcchhhH
Confidence 02233445558899999999999986 99999999999 5 66777999999999999999 88999999999
Q ss_pred hhhc------c-----CCCeEEecchHHH-HHHHhhC--CCCCcccHHHHHHHHHHHHHhhc-ccccceeeeeccccCCC
Q 005411 116 KSLV------P-----FVGRILRIERLAE-EILDQAS--PDGSIWTLDVFIETFLKQLRSAA-NKIVGLKSIAAYRSGLE 180 (698)
Q Consensus 116 ~~~~------~-----~~~~i~rie~~~~-~~~~~~~--~~~~~~~~~~~~~al~~~l~~~~-~~~vgfksi~~y~~gl~ 180 (698)
++++ . |||++++||...+ ++++++. +|.++.+|++|++||++|+++|. .|| .+++|||+
T Consensus 182 ~~l~~~~f~~~v~PafRpD~~l~ie~~~f~~~v~~L~e~sg~~i~s~~~~~~AL~~r~~~F~~~Gc------~asdhgl~ 255 (497)
T 2q01_A 182 AAIRESGWGGHVITAYRPDAVIDFEDERSPRAFERFAETSGQDVYSWKSYLEAHRLRRQAFIDAGA------TSSDHGHP 255 (497)
T ss_dssp HHHHHSSCCCCEECCBCCCTTTCTTCTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHTTC------CEEEECCS
T ss_pred HHHhhCCCCceeeeccCchhhcCCCcccHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHcCC------EEeccCCc
Confidence 9742 1 7899999997765 7777773 66678899999999999999752 333 34689998
Q ss_pred CCCC--CCHHHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCC------------C-CCCCC---
Q 005411 181 INPH--VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLD--- 242 (698)
Q Consensus 181 ~~~~--~~~~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~~~e~a~e~glpvq~H~G~------------G-~~~~~--- 242 (698)
..++ ++.+|++++|+|+++++. ...+...+..+++..+.++|.++|||||+|+|+ | |+|+|
T Consensus 256 ~~~~~~~s~~e~~~if~k~l~g~~-s~~e~~~~~~~ll~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~~~~G~d~G~D~~~ 334 (497)
T 2q01_A 256 TAATADLSDVEAEALFNSLVKGDV-TPEKAELFRAQMLTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIPM 334 (497)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEEC
T ss_pred ccCCCCCCHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHhcCCcEEEeeccCCCCCHHHHHHcCCCCCCCCCC
Confidence 4433 789999999999999753 454556788899999999999999999999998 4 45554
Q ss_pred -CCCCCcc--chHHHHhhcCCCCcEEEEecCCCc--chHHHHHHHHhCCeeeeecccccCcccHHHHHHHHHHHHhhCCC
Q 005411 243 -LRLSNPL--HLRAILEDKRFSKCRFVLLHASYP--FSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPT 317 (698)
Q Consensus 243 -~~~~~p~--~L~~l~~~~~~P~~~~vllH~g~p--~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~ 317 (698)
..+++|+ +|+.+. ++|+.|+|+.|+ +| |.+++++||++|||||+|.+|||++. +.||++++++++|++|+
T Consensus 335 ~~~~a~~L~~lL~~l~---~~~~pktILy~L-np~~y~~elatlag~Fpkvq~G~~WWF~d~-~~gm~~ql~~l~el~~l 409 (497)
T 2q01_A 335 RTEYVDALKPLLTRLG---NDPRLSIILFTL-DETTYSRELAPLAGHYPVLKLGPSWWFHDS-PEGMMRFREQVTETAGF 409 (497)
T ss_dssp CCCCTTTSHHHHHHHT---TCTTCCEEECCS-CTTHHHHTHHHHHTTCTTEEECCCCGGGCS-HHHHHHHHHHHHHHHCS
T ss_pred chHHHHHHHHHHHHHh---hcCCCCeEEEeC-CcchhHHHHHHHHccCCccccCCchhhccC-hHHHHHHHHHHHHhhch
Confidence 3466664 444433 465566666666 44 79999999999999999999999865 89999999999999999
Q ss_pred CcEE-EecCCCCCccchhh-hHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCCCccc
Q 005411 318 KKVM-FSTDAYASPETYFL-GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKD 386 (698)
Q Consensus 318 ~kil-fgSD~~~~P~~~~~-~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~~~ 386 (698)
+|++ |+||+|+|++ |+ +|++|||+||++|++||++|.|+.+||.+++++|+++||+|+|+|+..+.-
T Consensus 410 skfvGmlTDsRsflS--y~~RheyfRRiLc~vLg~~V~~~~lse~eA~r~a~~l~~~Na~r~Y~l~~~~~~ 478 (497)
T 2q01_A 410 YNTVGFNDDTRAFLS--IPARHDVARRVDSAFLARMVAEHRMDLVEAEELIVDLTYNLPKKAYKLDQRPDW 478 (497)
T ss_dssp TTBCCCCCCCSCGGG--HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHTTCCSCCTT
T ss_pred hcccccccchhHhhh--hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhHHHHhCCCCCccc
Confidence 9999 9999999986 67 999999999999999999999999999999999999999999999987653
No 14
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=100.00 E-value=5.9e-47 Score=426.41 Aligned_cols=224 Identities=21% Similarity=0.222 Sum_probs=183.6
Q ss_pred ccEEEEeecCC-ceeccCCCCccEEEEEeecCCCC------cCCCChHHHHHHHHHHHHHhcCc-----eeeeeeeeEEE
Q 005411 467 GEIRLMPDLST-RWRIPWQKQEEMIMADMHLKPGE------PWEYCPREALRKVSRLLKEEFNL-----VLNAGFEIEFY 534 (698)
Q Consensus 467 gd~~L~PD~sT-~~~~Pw~~~~a~V~~d~~~~dg~------p~~~cPR~~L~r~~~~l~~~~G~-----~~~~g~E~EF~ 534 (698)
.++++.||++| .++.| ++-.|.|.+++.+|+ |+..|||++||++++.++ .+|. ++.+|+|+|||
T Consensus 144 arg~~~~D~ts~afi~~---~TL~IP~~f~s~~Ge~ld~ktPL~rsPR~ilk~A~~~Lk-~~G~d~~~v~~~~G~E~EFF 219 (729)
T 3o6x_A 144 ARGYTAWDGSSPAFVVD---TTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQ-LFDKNITRVFTNLGWEQEYF 219 (729)
T ss_dssp ----CCBCSSSCCEEET---TEEECCBCCC----CCCBSHHHHHHHHHHHHHHHHHHHH-TSSSCCCCEEEEEEEEECEE
T ss_pred ccCceecCCCCCeEEeC---CeEEEEEEEEeCCCCcCCCCCchhhCHHHHHHHHHHHHH-HcCCCCccceEEEEeccEEE
Confidence 58999999999 66776 577788888887775 688999999999999998 6897 69999999999
Q ss_pred EEeeccc----C----CC--CCceeCCCC-----CcccCccccCchHHHHHHHHHHHhCCCceeeeecCCCCCceEEecC
Q 005411 535 LLKSVLR----E----GK--EEWVPIDFT-----PYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALG 599 (698)
Q Consensus 535 l~~~~~~----~----g~--~~~~p~~~~-----~~~~~~~~~~~~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~ 599 (698)
||++... + |. .+..|. ++ +||...+ +...+++++|.+.|+++||+||+.|+|+|||||||++.
T Consensus 220 Lfd~~~~~~r~dl~~tGrtl~G~~P~-kgq~l~d~Yf~~~p-d~~~~~~~di~~~L~~~GI~ve~~H~EvaPGQ~EI~~~ 297 (729)
T 3o6x_A 220 LVDTSLYNARPDLRLTGRTLMGHSSA-KDQQLEDHYFGSIP-PRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPI 297 (729)
T ss_dssp EEEHHHHHSCTTHHHHSSCSCCCC---------------CC-HHHHHHHHHHHHHHHHHTCCEEEECBCSSTTEECCEEC
T ss_pred EEecchhccCcccccccccccCCCCC-CCCCCCCccCCCCc-hhHHHHHHHHHHHHHHCCCCeEEeecCCCCCceEeccC
Confidence 9997421 1 11 112332 22 7887666 67899999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHcCCeeeeccccCCCCCCcccccccccccC-CccccccCCCCCCC---CCcHHHHHH
Q 005411 600 HTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSLWQN-GENVFMASDSSSKH---GMSSVGEKF 675 (698)
Q Consensus 600 p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~-g~n~f~~~d~~~~~---~lS~~~~~f 675 (698)
|.++++|||+++++|++||+||++||+.|||||||+.+.+|||+|+|+|||++ |+|+|.++ +++. ++|..+++|
T Consensus 298 ~~~al~AAD~~~l~K~vvK~VA~~hGl~ATFMPKP~~g~nGSG~HvH~SL~~~~G~NLF~~~--d~~~~~~~~s~~~~~f 375 (729)
T 3o6x_A 298 FENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPG--KNPKGNMLFLTFLVNV 375 (729)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHHHHTTEEEECSSCSSTTSCCCBEEEEEEEEETTCCCSSCCC--SSTTTCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCCCCcceeeccccCCCCCcCCCCC--CCccchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999975 99999853 3333 468899999
Q ss_pred HHHHHHHHHHhhhhhcCCCCCCC
Q 005411 676 MAGVLHHLSSILAFTAPVPNRLL 698 (698)
Q Consensus 676 iaGlL~h~~al~a~~~Pt~nSY~ 698 (698)
|||||+|+|+|+||++|++|||+
T Consensus 376 IaGVLkHa~aL~A~~aPt~NSYR 398 (729)
T 3o6x_A 376 LMMVHKNQDLLRASIMSAGNSHR 398 (729)
T ss_dssp HHHHHHTHHHHHHHSCCHHHHTT
T ss_pred HHHHHHhHHHHHHHhCCCccccc
Confidence 99999999999999999999994
No 15
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A*
Probab=100.00 E-value=4.5e-38 Score=338.34 Aligned_cols=338 Identities=15% Similarity=0.102 Sum_probs=244.0
Q ss_pred HHHHHHhccCCccccCCCCcccCCC-Ccchhhc--------cc-c---cCCCC----CC--------CCCcc-hhHHHHH
Q 005411 4 EELREVVENIELVDGHAHNIVSLDS-SFPFIQS--------FS-E---ATGPA----LS--------YAPYS-LSFKRNL 57 (698)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~~-~~~~~~~--------~~-e---a~~~~----~~--------~~~~~-l~~~~~~ 57 (698)
.+|++.++++||||-|||-.-..-. +. |..+ .. + +.|-. ++ .+-+. .-|.|+|
T Consensus 13 ~~Ly~~a~~~PIiDyH~HL~P~~iae~~-f~ni~elwgdHYkw~r~mRa~Gv~e~~~iT~s~~ekA~~vgnplflyhW~h 91 (437)
T 2qee_A 13 EKVKNAVNNQPVTDMHTHLFSPNFGEIL-LWDIDELLTYHYLVAEVMRWTDVSIEAFWAMSKREQADLIWEELFIKRSPV 91 (437)
T ss_dssp HHHHHHHHHSCEEECSCSCCCGGGCTTS-BCSHHHHHTSHHHHHHHHTTCCSCHHHHHHSCHHHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHhcCCeeccccCCCHHHHHhcc-cCCHHhccccHHHHHHHHHHcCCCHHHhcCCCHHHHHHHhCCCcceeechh
Confidence 4678888999999999997654310 01 1110 00 1 11100 00 00111 1234678
Q ss_pred HH--------HHhhhCCCC---CHHHHHHHHHH-cChhhHHHHHHhhCCcEEEEEecCCCCCCCCChH---HHhh-hc-c
Q 005411 58 KN--------IAELYGCDS---SLQAVEEYRRA-AGLQSICSICFEAANISAVLIDDGLKLDKKHGLD---WHKS-LV-P 120 (698)
Q Consensus 58 ~~--------l~~~fg~~~---~~~~i~~~~~~-l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~---~h~~-~~-~ 120 (698)
+| |++ ||++. |+++ |+++++ +..+.++|.+|+++||+++|| ||||+|+++ ||++ +. .
T Consensus 92 lEa~~~~~t~L~r-FGid~~~~ta~~-~~~~n~~l~~~~~~r~ll~~~nV~~v~T----TdDP~D~Le~~~~h~~~f~~~ 165 (437)
T 2qee_A 92 SEACRGVLTCLQG-LGLDPATRDLQV-YREYFAKKTSEEQVDTVLQLANVSDVVM----TNDPFDDNERISWLEGKQPDS 165 (437)
T ss_dssp SHHHHHHHHHHHH-TTCCGGGCCHHH-HHHHHHTCCHHHHHHHHHHHTTEEEEEC----CBCTTSHHHHHHHHTTCCCCT
T ss_pred hhcccchhHHHHH-cCCCCCccCHHH-HHHHHHHhCcccHHHHHHHHcCCeEEEe----CCCCCCchhhhHHHhhcCCCc
Confidence 88 999 99997 9999 999999 554444999999999999999 999999999 9998 44 1
Q ss_pred CCCeEEecchHH---HHHHHhhC-CCCCc------ccHHHHHHHHHHHHHhhcccccceeeeecc--ccCCCC-CCCCCH
Q 005411 121 FVGRILRIERLA---EEILDQAS-PDGSI------WTLDVFIETFLKQLRSAANKIVGLKSIAAY--RSGLEI-NPHVTK 187 (698)
Q Consensus 121 ~~~~i~rie~~~---~~~~~~~~-~~~~~------~~~~~~~~al~~~l~~~~~~~vgfksi~~y--~~gl~~-~~~~~~ 187 (698)
++-..+|..++. .+++++|. +|.++ .+|+++++||++|.+ +.||. +|||+. ..+++.
T Consensus 166 rv~Pa~RpD~~l~~f~~~v~~L~~sg~~i~~~~~~~t~~~~~~AL~~rF~----------~~Gc~~sDh~l~~~~~~~~~ 235 (437)
T 2qee_A 166 RFHAALRLDPLLNEYEQTKHRLRDWGYKVNDEWNEGSIQEVKRFLTDWIE----------RMDPVYMAVSLPPTFSFPEE 235 (437)
T ss_dssp TEECCEECHHHHHCHHHHHHHHHHTTCCCCSSCSHHHHHHHHHHHHHHHH----------HHCCSCEEEEECTTCCSSCS
T ss_pred eEeecCCchHHHhhHHHHHHHHHhcCCCcccCcccCCHHHHHHHHHHHHH----------HhCCEEEEecCCcCcCCCCC
Confidence 223445555543 25665553 66677 789999999999843 23444 688864 332221
Q ss_pred HHHHHHHHHHHhcCCCCccCchhhhhHHHHHHHHHHhhCCCcEEEecCCCC-C------CCC-CCCCCccchHHHHhhcC
Q 005411 188 KDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGD-K------DLD-LRLSNPLHLRAILEDKR 259 (698)
Q Consensus 188 ~ea~~~~~~~l~~~~~~~~~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~-~------~~~-~~~~~p~~L~~l~~~~~ 259 (698)
.+ ..+++.+.+.++|.|+|||||+|+|+-. . |.| +...++..|..++. +
T Consensus 236 ~~---------------------~~~~~~~~l~~~~~e~gwvmQlHiGa~Rn~n~~~~~g~D~i~~~~~~~L~~ll~--~ 292 (437)
T 2qee_A 236 SN---------------------RGRIIRDCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLR--E 292 (437)
T ss_dssp SH---------------------HHHHHHHTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHH--H
T ss_pred CH---------------------HHHHHHHHHHHHHHhCCCeEEEecCcccCCCHHhccCCCCCCccCHHHHHHHHH--h
Confidence 11 2345555588999999999999999831 1 121 12233356788888 7
Q ss_pred CCCcEEEEecCCCcchHHHHHHHHhCCeeeeecccccCcccHHHHHHHHHHHHhhCCCCcEE-EecCCCCCccchhhhHH
Q 005411 260 FSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYASPETYFLGAK 338 (698)
Q Consensus 260 ~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~~P~~~~~~~~ 338 (698)
||+.+|-..+.......+++.+|++|||||++.+|||++. +.||+++++.++++.+ .|++ |.||+|+|.+ ++++++
T Consensus 293 ~~~~~lpktiLn~~~n~elat~ag~Fpnvq~g~~WWF~d~-p~gm~~q~~~~l~lL~-~~fvGmlTDsRsfls-yi~Rhe 369 (437)
T 2qee_A 293 YPNNKFLVTMLSRENQHELVVLARKFSNLMIFGCWWFMNN-PEIINEMTRMRMEMLG-TSFIPQHSDARVLEQ-LIYKWH 369 (437)
T ss_dssp CTTSCEEEEESCGGGHHHHHHHHHHCTTEEEBCCCGGGCS-HHHHHHHHHHHHHHHT-TCSBCCCCCCSBTTH-HHHHHH
T ss_pred CcccCCCeeecChhhHHHHHHHHccCCcceecCcccccCC-HHHHHHHHHHHHHHhC-cCcccCccchhHHhc-cchHHH
Confidence 8887776666655667899999999999999999999865 8999999999988888 6666 9999999986 347999
Q ss_pred HHHHHHHHHHHhh----hhcCCCChhHH--HHHHHHHHHHHHHHHhcCCCCcc
Q 005411 339 RAREVVFSVLRDT----CIDEDLSVGEA--IEVAKDIFALNAAQFYKINLGVK 385 (698)
Q Consensus 339 ~~R~~l~~vl~~~----v~~g~l~~~ea--~~~~~~Il~~NA~rly~l~~~~~ 385 (698)
+|||+||++|++| |++|+++ +++ ++++++|||+||+++|++..-+.
T Consensus 370 yfRRilc~~Lg~~~~~lve~G~~p-d~~~l~~~v~~I~y~Na~~yf~~~~~~~ 421 (437)
T 2qee_A 370 HSKSIIAEVLIDKYDDILQAGWEV-TEEEIKRDVADLFSRNFWRFVGRNDHVT 421 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHTHHHHHHHTCC----
T ss_pred HHHHHHHHHHHHHHHhhhhCCCCC-CHHHHHHHHHHHHHHHHHHHhcccccee
Confidence 9999999999999 9999999 554 79999999999999999976553
No 16
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=99.79 E-value=2.3e-18 Score=181.06 Aligned_cols=149 Identities=19% Similarity=0.274 Sum_probs=113.4
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeee
Q 005411 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (698)
Q Consensus 211 l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~ 290 (698)
+.+..+.++|+.|+++|+||++|+|... +.+..+++|..+..+++ +||+++||+.|+|+||..++..++..++|||+
T Consensus 135 ~~d~~~~~~~~~a~e~glpv~iH~~~~~-~~~~~~~~p~~~~~v~~--~~P~l~ivl~H~G~~~~~~~~~l~~~~~nvy~ 211 (291)
T 3irs_A 135 VDDRRLYPLYAFCEDNGIPVIMMTGGNA-GPDITYTNPEHIDRVLG--DFPDLTVVSSHGNWPWVQEIIHVAFRRPNLYL 211 (291)
T ss_dssp TTCGGGHHHHHHHHHTTCCEEEECSSSC-SSSGGGGCHHHHHHHHH--HCTTCCEEEEGGGTTCHHHHHHHHHHCTTEEE
T ss_pred CCCHHHHHHHHHHHHcCCeEEEeCCCCC-CCCCccCCHHHHHHHHH--HCCCCEEEeecCCcccHHHHHHHHhHCCCeEe
Confidence 3456678889999999999999998642 22445677888999999 79999999999999999999888889999999
Q ss_pred ecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHH
Q 005411 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIF 370 (698)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il 370 (698)
|+|+++... + +.. .+.++++..|.+||||||| ||.... . ..+ +.+.+ +.+++ +.+++|+
T Consensus 212 ~~Sg~~~~~-~-~~~-~~~~~~~~~g~drllfgSD---~P~~~~--~----~~~-~~~~~------l~l~~--e~~~~i~ 270 (291)
T 3irs_A 212 SPDMYLYNL-P-GHA-DFIQAANSFLADRMLFGTA---YPMCPL--K----EYT-EWFLT------LPIKP--DAMEKIL 270 (291)
T ss_dssp ECGGGGSSS-T-THH-HHHHHHTTGGGGTBCCCCC---BTSSCH--H----HHH-HHHHT------SSCCH--HHHHHHH
T ss_pred cHHHHhccC-C-CHH-HHHHHHHHhCcceEEEecC---CCCCCH--H----HHH-HHHHH------CCCCH--HHHHHHH
Confidence 999986422 1 222 3556788889999999999 674321 1 111 11221 23344 6799999
Q ss_pred HHHHHHHhcCCCC
Q 005411 371 ALNAAQFYKINLG 383 (698)
Q Consensus 371 ~~NA~rly~l~~~ 383 (698)
++||+|||+++..
T Consensus 271 ~~NA~rl~~~~~~ 283 (291)
T 3irs_A 271 HGNAERLLAQAGR 283 (291)
T ss_dssp THHHHHHHHHSCC
T ss_pred HHHHHHHhCcccc
Confidence 9999999998654
No 17
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=99.61 E-value=1.5e-15 Score=161.09 Aligned_cols=172 Identities=20% Similarity=0.260 Sum_probs=112.7
Q ss_pred CHHHHHHHHHHHHhcC--CCCc----cCchhhhhHHHHHHHHHHhhCCCcEEEecCCCCC--CCCCCC----CCc-----
Q 005411 186 TKKDAEEGLAEDLRSG--KPVR----ITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDK--DLDLRL----SNP----- 248 (698)
Q Consensus 186 ~~~ea~~~~~~~l~~~--~~~~----~~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~--~~~~~~----~~p----- 248 (698)
+++++.+.+++++... .+.+ .....+.|..+.|+|+.|+++|+||++|+|.+.. +..... ..+
T Consensus 108 ~~~~a~~el~r~~~~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv~iH~g~~~~~p~~~~~~~~~~~~~~~~~~ 187 (312)
T 3ij6_A 108 NIESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHPVFDARKPDNNLVFSWEYELSQAMLQ 187 (312)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCCEEEECCCCTTSSSCCTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCeEEEcCCCCCCCCCcccccccHHHHHHHHHH
Confidence 4556666677776421 1222 2235678888999999999999999999987421 111000 001
Q ss_pred cchHHHHhhcCCCCcEEEEecCC--CcchHHHHH------HHHhCCeeeeecccccCcccHHHHHHHHHHHHhhCCCCcE
Q 005411 249 LHLRAILEDKRFSKCRFVLLHAS--YPFSKEASY------LAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKV 320 (698)
Q Consensus 249 ~~L~~l~~~~~~P~~~~vllH~g--~p~~~e~~~------la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~ki 320 (698)
+.+..+++ |||++|||+.|+| .||..+... .+..++|||+|+|..+. ...++.+++..|.+||
T Consensus 188 li~~gv~~--rfP~Lkii~~H~Gg~~P~~~~r~~~~~~~~~~~~~~nvy~dts~~~~-------~~~l~~~~~~~g~dri 258 (312)
T 3ij6_A 188 LVQSDLFQ--DYPNLKILVHHAGAMVPFFSGRIDHILDEKHAQDFKKFYVDTAILGN-------TPALQLAIDYYGIDHV 258 (312)
T ss_dssp HHHTTHHH--HCTTCCEEESGGGTTTTTSHHHHHHHSCHHHHHHGGGCEEECCSSSC-------HHHHHHHHHHHCGGGE
T ss_pred HHHcChHh--hCCCCeEEecCCcccHHHHHHHHHHhcccchHHHcCeEEEeCCCCCC-------HHHHHHHHHhCCCCeE
Confidence 12246777 8999999999997 577654332 34578999999997642 2357788888899999
Q ss_pred EEecCCCCCccchhh-h-HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005411 321 MFSTDAYASPETYFL-G-AKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 321 lfgSD~~~~P~~~~~-~-~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
||||| ||...++ + .+...+. +++ +.+++ +.+++|+++||+|||+-+
T Consensus 259 lfgSD---~P~~~~p~~~~~~~~~~--------l~~--l~l~~--~~~~~i~~~NA~rl~~~~ 306 (312)
T 3ij6_A 259 LFGTD---APFAVMPSGADQIITQA--------IND--LTISD--KDKQKIFHDNYYSLIKEG 306 (312)
T ss_dssp ECCCC---BTSSSTTTCSHHHHHHH--------HHT--SSSCH--HHHHHHHTHHHHHHHCC-
T ss_pred EEeCC---CCCCcCCCcchHHHHHH--------HHH--cCCCH--HHHHHHHHHHHHHHHhCc
Confidence 99999 6643211 1 1111122 222 23344 679999999999999853
No 18
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=99.60 E-value=2.7e-15 Score=158.46 Aligned_cols=151 Identities=17% Similarity=0.153 Sum_probs=106.2
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcch--------------
Q 005411 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFS-------------- 275 (698)
Q Consensus 210 ~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~-------------- 275 (698)
.+.+..+.+.++.|+++|+||++|++.. ++..+..+++ +||+++||+.|+|.|..
T Consensus 118 ~~~~~~~~~~~~~~~~~glpv~ih~~~~---------~l~~l~~ll~--~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~ 186 (303)
T 4do7_A 118 FVDDADFARGVAWLQANDYVYDVLVFER---------QLPDVQAFCA--RHDAHWLVLDHAGKPALAEFDRDDTALARWR 186 (303)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEECCCGG---------GHHHHHHHHH--HCCSSCEEEGGGGCCCGGGCC---CHHHHHH
T ss_pred cccCHHHHHHHHHHHHCCCeEEEecCHH---------HHHHHHHHHH--HCCCCCEEEeCCCCCCccccccccchHHHHH
Confidence 3566778888999999999999999742 3446778888 79999999999998752
Q ss_pred HHHHHHHHhCCeeeeecccccCccc---------HHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh-HHHHHHHHH
Q 005411 276 KEASYLAYVYPQVYLDFGLAIPKLS---------VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG-AKRAREVVF 345 (698)
Q Consensus 276 ~e~~~la~~~pnVy~d~s~~~~~~~---------~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~-~~~~R~~l~ 345 (698)
..+..|+ .+||||+++|+++.... .......++.+++..|.+||||||| ||...... .....+.
T Consensus 187 ~~l~~la-~~~nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD---~P~~~~~~~~~~~~~~-- 260 (303)
T 4do7_A 187 AALRELA-ALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSD---WPVCLLAASYDEVASL-- 260 (303)
T ss_dssp HHHHHHH-TSTTEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCC---BTGGGGTCCHHHHHHH--
T ss_pred HHHHHHH-hCCCEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCC---CCCCcCcCCHHHHHHH--
Confidence 2345565 79999999998764321 2233457889999999999999999 77432111 1112222
Q ss_pred HHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCCCc
Q 005411 346 SVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (698)
Q Consensus 346 ~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (698)
+.+|+.. .++ + +.+++|+++||+|||+++.+.
T Consensus 261 --~~~~~~~-~l~--~--~~~~~i~~~Na~rl~~l~~~~ 292 (303)
T 4do7_A 261 --VERWAES-RLS--A--AERSALWGGTAARCYALPEPA 292 (303)
T ss_dssp --HHHHHHH-HCC--H--HHHHHHTTHHHHHHTTCC---
T ss_pred --HHHHHhc-CCC--H--HHHHHHHHHHHHHHhCCCCcc
Confidence 2222111 244 3 679999999999999997654
No 19
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=99.55 E-value=1.4e-14 Score=150.06 Aligned_cols=138 Identities=20% Similarity=0.145 Sum_probs=104.1
Q ss_pred hhHHHHHHHHHHhhC-CCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeee
Q 005411 212 IDYIFISSLEVAQFL-DLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (698)
Q Consensus 212 ~d~~~~~~~e~a~e~-glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~ 290 (698)
.+..+.++++.|+++ |+||++|++.+. ....+..+..+++ +||+++||+.|+|.++..++..++..++|||+
T Consensus 128 ~~~~~~~~~~~a~~~~~lpv~iH~~~~~-----~~~~~~~~~~~l~--~~p~l~iv~~H~G~~~~~~~~~~~~~~~~~y~ 200 (272)
T 3cjp_A 128 QIKSLKPIFKYSMDSGSLPIWIHAFNPL-----VLQDIKEIAELCK--AFPKVPVILGHMGGSNWMTAVELAKEIQNLYL 200 (272)
T ss_dssp CGGGGHHHHHHHHHTTCCCEEECCSTTC-----CHHHHHHHHHHHH--HSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEE
T ss_pred ccHHHHHHHHHHHhccCCcEEEeCCCCC-----ccccHHHHHHHHH--HCCCceEEEECCCCccHHHHHHHHHhCCCEEE
Confidence 667889999999999 999999998531 1123456778888 79999999999998877777788888999999
Q ss_pred ecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHH
Q 005411 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIF 370 (698)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il 370 (698)
|+|+.+.. ..++++++..| +|+||||| +|.. .....++.+. ...++ + +.+++|+
T Consensus 201 ~~s~~~~~-------~~~~~~~~~~~-dril~gSD---~P~~---~~~~~~~~~~--------~~~l~--~--~~~~~i~ 254 (272)
T 3cjp_A 201 DTSAYFST-------FVLKIVINELP-LKCIFGTD---MPFG---DLQLSIEAIK--------KMSND--S--YVANAVL 254 (272)
T ss_dssp ECTTCSCH-------HHHHHHHHHST-TTEECCCC---TTSS---CHHHHHHHHH--------HHCSS--H--HHHHHHH
T ss_pred EecccccH-------HHHHHHHHhCC-CeEEEeCC---CCCC---ChHHHHHHHH--------hcCCC--H--HHHHHHH
Confidence 99987532 35777888888 99999999 5632 1222233221 11344 3 6799999
Q ss_pred HHHHHHHhcCCC
Q 005411 371 ALNAAQFYKINL 382 (698)
Q Consensus 371 ~~NA~rly~l~~ 382 (698)
++||+|||+++.
T Consensus 255 ~~Na~rl~~l~~ 266 (272)
T 3cjp_A 255 GDNISRLLNIEG 266 (272)
T ss_dssp THHHHHHHTC--
T ss_pred HHHHHHHhCccC
Confidence 999999999964
No 20
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=99.54 E-value=1e-14 Score=158.30 Aligned_cols=167 Identities=18% Similarity=0.225 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHhc-C-CCCcc----CchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCC-----CCCCC--------
Q 005411 187 KKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLD-----LRLSN-------- 247 (698)
Q Consensus 187 ~~ea~~~~~~~l~~-~-~~~~~----~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~-----~~~~~-------- 247 (698)
.+++.+.++++... + .+.++ ....+.|..++|+|+.|+++|+||++|+|.+..... .....
T Consensus 158 ~~~a~~EL~r~~~~~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~g~~~~~~~~p~~~~~~~~~~~g~~~e 237 (373)
T 4inf_A 158 PEWSAREIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHPATSPDSMIDPMLEAGLDGAIFGFGVE 237 (373)
T ss_dssp HHHHHHHHHHHHHTSCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECCCCCCTTTCHHHHHHTCSSTTTHHHHH
T ss_pred HHHHHHHHHHHHhhcCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECCCCCCccccccccccccchhhhhhHHH
Confidence 45555666776653 2 23332 234678888999999999999999999997532110 00000
Q ss_pred ------ccchHHHHhhcCCCCcEEEEecCC--CcchHHHHHHHH----------------------hCCeeeeecccccC
Q 005411 248 ------PLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYLAY----------------------VYPQVYLDFGLAIP 297 (698)
Q Consensus 248 ------p~~L~~l~~~~~~P~~~~vllH~g--~p~~~e~~~la~----------------------~~pnVy~d~s~~~~ 297 (698)
.+.+..+++ |||++|||+.|+| .||..+....+. ..+|||+|+|.++.
T Consensus 238 t~~~~~~Li~~gv~~--rfP~LkiilaH~Gg~~P~~l~Rld~~~~~~~~~~~~~~~~~l~~~pse~~~~nvy~d~sg~~~ 315 (373)
T 4inf_A 238 TGMHLLRLITIGIFD--KYPSLQIMVGHMGEALPYWLYRLDYMHQAGVRSQRYERMKPLKKTIEGYLKSNVLVTNSGVAW 315 (373)
T ss_dssp HHHHHHHHHHHTHHH--HCTTCCEEECHHHHTTTTTHHHHHHHHHHHHHHTCCTTCCCCSSCHHHHHHHTEEEECTTCCC
T ss_pred HHHHHHHHHHcCchh--hCcCCeEEEecccchHHHHHHHHHHHHhhccccccccccccccCCHHHHHhcCeEEeeccccc
Confidence 112456777 8999999999997 677533221110 03699999998752
Q ss_pred cccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHH
Q 005411 298 KLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (698)
Q Consensus 298 ~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rl 377 (698)
...++.+++..|.+||||||| ||.. .... .. +.++.-.+ ++ +.+++|+++||+||
T Consensus 316 -------~~~l~~~~~~~g~drilfgSD---~P~~--~~~~-~~--------~~l~~~~l--~~--e~~~~I~~~NA~rl 370 (373)
T 4inf_A 316 -------EPAIKFCQQVMGEDRVMYAMD---YPYQ--YVAD-EV--------RAMDAMDM--SA--QTKKKFFQTNAEKW 370 (373)
T ss_dssp -------HHHHHHHHHHHCGGGEECCCC---TTTT--CCHH-HH--------HHHHTCSC--CH--HHHHHHHTHHHHHH
T ss_pred -------HHHHHHHHHHcCcceEEEecC---CCCC--ccHH-HH--------HHHHhCCC--CH--HHHHHHHhHHHHHH
Confidence 236778888899999999999 6643 2221 11 12222234 44 67999999999999
Q ss_pred hcC
Q 005411 378 YKI 380 (698)
Q Consensus 378 y~l 380 (698)
|+|
T Consensus 371 f~L 373 (373)
T 4inf_A 371 FKL 373 (373)
T ss_dssp TTC
T ss_pred hCc
Confidence 986
No 21
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=99.52 E-value=1.4e-14 Score=153.10 Aligned_cols=149 Identities=13% Similarity=0.085 Sum_probs=107.1
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCc---------chHHHH
Q 005411 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEAS 279 (698)
Q Consensus 209 ~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p---------~~~e~~ 279 (698)
..+.+..+.++++.|++ ||++++|++.. .+..+.++++ +| +++||+.|+|.| +.+++.
T Consensus 133 ~~~~~~~~~~~~~~l~~-gl~v~l~~~~~---------~l~~l~~~~~--~~-~~~iVidH~G~p~~~~g~~~~~~~~~~ 199 (303)
T 4d9a_A 133 DDAPKDKFLEVAGRLPA-GWHVVIYFEAD---------ILEELRPFMD--AI-PVPIVIDHMGRPDVRQGPDGADMKAFR 199 (303)
T ss_dssp SCCCHHHHHHHHTSCCT-TCEEEEECCGG---------GHHHHHHHHH--HC-SSCEEEGGGGCCCGGGCTTSHHHHHHH
T ss_pred cccCHHHHHHHHHHHhc-CCEEEEecccc---------cHHHHHHHHH--HC-CCcEEEeCCCCCCcccCCCCHHHHHHH
Confidence 35677788899999999 99999999742 2345777888 79 899999999964 567788
Q ss_pred HHHHhCCeeeeecccccCcc----cHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhH-HHHHHHHHHHHHhhhhc
Q 005411 280 YLAYVYPQVYLDFGLAIPKL----SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGA-KRAREVVFSVLRDTCID 354 (698)
Q Consensus 280 ~la~~~pnVy~d~s~~~~~~----~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~-~~~R~~l~~vl~~~v~~ 354 (698)
.++..+||||+++|++.... .......+++.+++.+ .+|+||||| ||.+..... ..+.+.+ +.+.++
T Consensus 200 ~l~~~~~NV~vKlSg~~~~~~~~~~~~~~~~~~~~~~~~~-~dRlmfGSD---wP~~~~~~~~~~~~~~~-~~~~~~--- 271 (303)
T 4d9a_A 200 RLLDSREDIWFKATCPDRLDPAGPPWDDFARSVAPLVADY-ADRVIWGTA---WPHPNMQDAIPDDGLVV-DMIPRI--- 271 (303)
T ss_dssp HHHHHCTTEEEECCCHHHHCTTCTTCHHHHHHHHHHHHHT-TTSEECCCC---TTCTTCTTSCCCHHHHH-HTHHHH---
T ss_pred HHHhhCCCEEEEeeCceecCCCCCCHHHHHHHHHHHHHhC-cccEEEecC---CCCcccccCCCCHHHHH-HHHHHH---
Confidence 89999999999999875211 1234566888999998 799999999 665432210 0111111 112222
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhcCCCC
Q 005411 355 EDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (698)
Q Consensus 355 g~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (698)
++ ++ +.+++|+++||+|||+++..
T Consensus 272 --~~-~~--~~~~~il~~NA~rly~~~~~ 295 (303)
T 4d9a_A 272 --AP-TP--ELQHKMLVTNPMRLYWSEEM 295 (303)
T ss_dssp --SC-SH--HHHHHHHTHHHHHHHCGGGC
T ss_pred --CC-CH--HHHHHHHHHHHHHHhCCCcc
Confidence 22 33 67999999999999998644
No 22
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=99.52 E-value=6.4e-15 Score=159.08 Aligned_cols=170 Identities=18% Similarity=0.197 Sum_probs=110.9
Q ss_pred CHHHHHHHHHHHHhc-C-CCCcc----CchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCC-C----CCCCC--------
Q 005411 186 TKKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKD-L----DLRLS-------- 246 (698)
Q Consensus 186 ~~~ea~~~~~~~l~~-~-~~~~~----~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~-~----~~~~~-------- 246 (698)
.++++.+.+++++.. + .+.++ ....+.|..+.|+|+.|+++|+||++|+|.+... . ...+.
T Consensus 139 ~~~~a~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~~~~~~~~~~~g~~~~~~~~~~~ 218 (357)
T 3nur_A 139 EPEAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPVNSDIYQSYYKGNYPEVTAATFA 218 (357)
T ss_dssp SHHHHHHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEECCCCCHHHHHHHTCCSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEecCCCCccccccccccCcccchhhhhh
Confidence 355666667777642 1 23322 2446778889999999999999999999975310 0 00000
Q ss_pred --------------CccchHHHHhhcCCCCcEEEEecCC--CcchHHHHHHHH----------h--CCeeeeecccccCc
Q 005411 247 --------------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYLAY----------V--YPQVYLDFGLAIPK 298 (698)
Q Consensus 247 --------------~p~~L~~l~~~~~~P~~~~vllH~g--~p~~~e~~~la~----------~--~pnVy~d~s~~~~~ 298 (698)
.++.+..+++ |||++|||+.|+| .||..+....+. . .+|||+|+|.++.
T Consensus 219 ~~~~~~~~~t~~~~~~li~~gv~~--rfP~LkiilaH~Gg~~P~~~~rld~~~~~~~l~~~ps~~~~~nvy~~~sg~~~- 295 (357)
T 3nur_A 219 CFGYGWHIDVGIHAIHLVLSGIFD--RYPKLNMIIGHWGEFIPFFLERMDEALFAEHLNHSVSYYFKNSFYITPSGMLT- 295 (357)
T ss_dssp TTTTHHHHHHHHHHHHHHHTTHHH--HSTTCCEEECGGGTTGGGGHHHHHHHSCCTTSSSCHHHHHHHSEEECCTTCCC-
T ss_pred hhhhchhHHHHHHHHHHHHcCchh--hCCCCeEEEecccccHHHHHHHHHhhhccccccCCHHHHHHhceeeecccCCC-
Confidence 0123556777 8999999999997 577654332211 1 1699999988653
Q ss_pred ccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005411 299 LSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (698)
Q Consensus 299 ~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (698)
. ..++.+++..|.+||||||| ||... ... .. ++++. +.+++ +.+++|+++||+|||
T Consensus 296 --~----~~l~~~~~~~g~drilfgSD---~P~~~--~~~-~~--------~~~~~--~~l~~--~~~~~i~~~NA~rl~ 351 (357)
T 3nur_A 296 --K----PQFDLVKKEVGIDRILYAAD---YPYIE--PEK-LG--------VFLDE--LGLTD--EEKEKISYTNGAKLL 351 (357)
T ss_dssp --H----HHHHHHHHHHCGGGBCBCCC---TTTCC--CTT-HH--------HHTTS--SCCCH--HHHHHHHTHHHHHHH
T ss_pred --H----HHHHHHHHHcCCceEEEeCC---CCCCC--chH-HH--------HHHHH--cCCCH--HHHHHHHhHHHHHHh
Confidence 1 25677788889999999999 66321 111 11 22222 23444 679999999999999
Q ss_pred cCCC
Q 005411 379 KINL 382 (698)
Q Consensus 379 ~l~~ 382 (698)
+|+.
T Consensus 352 ~l~~ 355 (357)
T 3nur_A 352 GLSS 355 (357)
T ss_dssp TC--
T ss_pred CCCC
Confidence 9864
No 23
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=99.50 E-value=1.7e-14 Score=150.51 Aligned_cols=149 Identities=14% Similarity=0.091 Sum_probs=103.2
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcc---------hHHHHH
Q 005411 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF---------SKEASY 280 (698)
Q Consensus 210 ~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~---------~~e~~~ 280 (698)
.+.+..+.++++.|+++|+||.+|++.. .+..+..+++ +|| ++||+.|+|.++ .+++..
T Consensus 120 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~---------~~~~~~~~~~--~~p-l~~vi~H~g~~~~~~~~~~~~~~~~~~ 187 (288)
T 2ffi_A 120 DLTGAQWRPLLERIGEQGWHVELHRQVA---------DIPVLVRALQ--PYG-LDIVIDHFGRPDARRGLGQPGFAELLT 187 (288)
T ss_dssp CTTSTTTHHHHHHHHHHTCEEEECSCTT---------THHHHHHHHT--TTT-CCEEESGGGSCCTTSCTTCTTHHHHTT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEeechh---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCChhHHHHHH
Confidence 4556677888999999999999999853 2345778888 899 999999998776 344434
Q ss_pred HHHhCCeeeeecccccCcccH-----HHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcC
Q 005411 281 LAYVYPQVYLDFGLAIPKLSV-----QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDE 355 (698)
Q Consensus 281 la~~~pnVy~d~s~~~~~~~~-----~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g 355 (698)
+ ..+||||+++|+++..... ......++++++.+|.+||||||| ||.........+.+.+ +.+.++
T Consensus 188 l-~~~~n~y~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD---~P~~~~~~~~~~~~~~-~~~~~~---- 258 (288)
T 2ffi_A 188 L-SGRGKVWVKVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSD---WPHTQHESEVSFGSAV-EQFEAL---- 258 (288)
T ss_dssp C-CCCSCEEEEEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECC---TTCTTCTTTCCHHHHH-HHHHHH----
T ss_pred H-HhCCCEEEEeCcchhhccccCCCHHHHHHHHHHHHHHhCCCceEEecC---CCCCCCCCCCCHHHHH-HHHHHH----
Confidence 4 3679999999987643211 122357889999999999999999 5532110000011111 222222
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhcCCCC
Q 005411 356 DLSVGEAIEVAKDIFALNAAQFYKINLG 383 (698)
Q Consensus 356 ~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (698)
.++ + +.+++|+++||+|||+++.+
T Consensus 259 ~~~--~--~~~~~i~~~NA~rl~~l~~~ 282 (288)
T 2ffi_A 259 GCS--A--QLRQALLLDTARALFGFELE 282 (288)
T ss_dssp CCC--H--HHHHHHHTHHHHHHTTCCCC
T ss_pred CCC--H--HHHHHHHHHCHHHHhCcccc
Confidence 223 3 67999999999999999765
No 24
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=99.47 E-value=5.6e-14 Score=147.71 Aligned_cols=146 Identities=12% Similarity=0.077 Sum_probs=101.8
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCc---------chHHHHHH
Q 005411 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEASYL 281 (698)
Q Consensus 211 l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p---------~~~e~~~l 281 (698)
+.+..+.+.++.|+++|+||++|++.. .+..+.++++ ++| ++||+.|+|.| +.+++..+
T Consensus 134 ~~~~~~~~~~~~a~~~glpv~iH~~~~---------~l~~~~~~l~--~~p-~~~Vi~H~g~p~~~~g~~~~~~~~~~~l 201 (294)
T 4i6k_A 134 LNTPDWQKFLRNVESLNWQVELHAPPK---------YLVQLLPQLN--EYS-FDVVIDHFGRVDPVKGIEDPDYQKFLSL 201 (294)
T ss_dssp SSSHHHHHHHHHHHHTTCEEEEECCHH---------HHHHHHHHHT--TSS-SCEEESGGGCCCTTTCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHcCCEEEEeeCcc---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 345567788999999999999999741 2234667777 799 99999999876 45566666
Q ss_pred HHhCCeeeeecccccCccc----HHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh-HHHHHHHHHHHHHhhhhcCC
Q 005411 282 AYVYPQVYLDFGLAIPKLS----VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG-AKRAREVVFSVLRDTCIDED 356 (698)
Q Consensus 282 a~~~pnVy~d~s~~~~~~~----~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~-~~~~R~~l~~vl~~~v~~g~ 356 (698)
+ .+||||+++|+...... .......++++++..|.+|+||||| ||.....+ ..+ .+ +.+.+.++ .
T Consensus 202 ~-~~~nv~~k~Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD---~P~~~~~~~~~y-~~-~~~~l~~~----~ 271 (294)
T 4i6k_A 202 L-NVKQHWIKVSGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSD---WPHTQHESLITY-ED-AIKAFKQI----V 271 (294)
T ss_dssp C-CTTTEEEECCCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCC---BTCTTCTTTCCH-HH-HHHHHHHH----C
T ss_pred H-hCCCEEEEecccccccccCCCchhhHHHHHHHHHHhCcccEEEeCC---CCCCCCcCCCCH-HH-HHHHHHHH----C
Confidence 6 57999999999764321 1122457889999999999999999 55432111 011 11 12233333 1
Q ss_pred CChhHHHHHHHHHHHHHHHHHhcCCC
Q 005411 357 LSVGEAIEVAKDIFALNAAQFYKINL 382 (698)
Q Consensus 357 l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (698)
++ + +.+++|+++||+|||+++.
T Consensus 272 ~~--~--~~~~~i~~~NA~rl~~l~~ 293 (294)
T 4i6k_A 272 FD--K--HEQCLILNQNPTELFGFSR 293 (294)
T ss_dssp CC--H--HHHHHHHTHHHHHHHTC--
T ss_pred CC--H--HHHHHHHHHCHHHHhCCCC
Confidence 33 3 6799999999999999853
No 25
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=99.44 E-value=6.4e-14 Score=148.72 Aligned_cols=146 Identities=13% Similarity=0.076 Sum_probs=98.2
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCC--------------------CccchHHHHhhcCCCCcEEEEe
Q 005411 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLS--------------------NPLHLRAILEDKRFSKCRFVLL 268 (698)
Q Consensus 209 ~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~--------------------~p~~L~~l~~~~~~P~~~~vll 268 (698)
..+.+..+.++|+.|+++|+||++|++....+....+. .++.+..+++ +||+++||+.
T Consensus 140 ~~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~--~~P~l~~v~~ 217 (327)
T 2dvt_A 140 LYYDLPQYRPFWGEVEKLDVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFD--EHPRLNIILG 217 (327)
T ss_dssp BCTTSGGGHHHHHHHHHHTCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEES
T ss_pred CCCCCcchHHHHHHHHHcCCeEEECCCCCCcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHh--hCCCCeEEEe
Confidence 45677788999999999999999999753211000000 0122557777 7999999999
Q ss_pred cCC--CcchHHHHHH----------------HHh--CCeeeeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCC
Q 005411 269 HAS--YPFSKEASYL----------------AYV--YPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYA 328 (698)
Q Consensus 269 H~g--~p~~~e~~~l----------------a~~--~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~ 328 (698)
|+| +|+..+.... +.. .+|||+|+|+.+. ...++++++..|.+|||||||
T Consensus 218 H~gg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~y~~~sg~~~-------~~~~~~~~~~~g~dril~gSD--- 287 (327)
T 2dvt_A 218 HMGEGLPYMMWRIDHRNAWVKLPPRYPAKRRFMDYFNENFHITTSGNFR-------TQTLIDAILEIGADRILFSTD--- 287 (327)
T ss_dssp GGGTTHHHHHHHHHHTTTTCCSCCSSSCSSCHHHHHHHHEEEECTTCCC-------HHHHHHHHTTTCGGGEECCCC---
T ss_pred cccccHHHHHHHHHhhhhhccccccCCCCCCHHHHHhhcEEEeccCCCC-------HHHHHHHHHHhCcccEEEecC---
Confidence 997 4554322221 112 2799999998652 246888899999999999999
Q ss_pred CccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005411 329 SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 329 ~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
||... .... + + ++++-.++ + +.+++|+++||+|||+|+
T Consensus 288 ~P~~~---~~~~---~-~----~~~~~~l~--~--~~~~~i~~~Na~rl~~l~ 325 (327)
T 2dvt_A 288 WPFEN---IDHA---S-D----WFNATSIA--E--ADRVKIGRTNARRLFKLD 325 (327)
T ss_dssp TTTSC---HHHH---H-H----HHHHSSSC--H--HHHHHHHTHHHHHHTTCC
T ss_pred CCCcc---HHHH---H-H----HHHHCCCC--H--HHHHHHHHHhHHHHhCCC
Confidence 66321 1111 1 1 12221344 4 679999999999999985
No 26
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=99.44 E-value=1.1e-13 Score=145.65 Aligned_cols=171 Identities=17% Similarity=0.220 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHhc-C-CCCcc----CchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCC-CCCCCCcc----------
Q 005411 187 KKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDL-DLRLSNPL---------- 249 (698)
Q Consensus 187 ~~ea~~~~~~~l~~-~-~~~~~----~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~-~~~~~~p~---------- 249 (698)
.+++.+.+++++.. + .+..+ ....+.+..+.++++.|+++|+||++|++....+. ......|.
T Consensus 102 ~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
T 2f6k_A 102 ELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPNEPAILPKNVDIDLPVPLLGFFMDTT 181 (307)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECCCCSCCCTTSSTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCCCCccccccccccccchhccchHHHH
Confidence 34555556666542 1 11111 12355677889999999999999999998643210 01111121
Q ss_pred ------chHHHHhhcCCCCcEEEEecCCC--cchHHH----------HHHHHhCCeeeeecccccCcccHHHHHHHHHHH
Q 005411 250 ------HLRAILEDKRFSKCRFVLLHASY--PFSKEA----------SYLAYVYPQVYLDFGLAIPKLSVQGMISSIKEL 311 (698)
Q Consensus 250 ------~L~~l~~~~~~P~~~~vllH~g~--p~~~e~----------~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~ 311 (698)
.+..+++ +||+++||+.|+|. |+..+. ..+...++|||+|+|++.. ...++++
T Consensus 182 ~~~~~l~~~~~~~--~~P~l~~v~~H~gg~~p~~~~~~~~~~~~~~~~~~~~~~~n~y~~~s~~~~-------~~~l~~~ 252 (307)
T 2f6k_A 182 MTFINMLKYHFFE--KYPNIKVIIPHAGAFLGIVDDRIAQYAQKVYQVDVYDVMHHVYFDVAGAVL-------PRQLPTL 252 (307)
T ss_dssp HHHHHHHHTTHHH--HCTTCEEEESGGGTTHHHHHHHHHHHHHHHHCCCHHHHHHHSEEECCSSCT-------TTHHHHH
T ss_pred HHHHHHHhcCccc--cCCCCeEEccCCCccchhhHHHHHhhccccCcccHHHHHhheEEeccCCCC-------HHHHHHH
Confidence 1345777 79999999999975 443221 1234456799999998753 1367888
Q ss_pred HhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcC
Q 005411 312 LELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (698)
Q Consensus 312 le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (698)
++..|.+||||||| ||.. .....++.+. .+.+ -..++ + +.+++|+++||+|||++
T Consensus 253 ~~~~g~drll~gSD---~P~~---~~~~~~~~~~-~l~~---~~~l~--~--~~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 253 MSLAQPEHLLYGSD---IPYT---PLDGSRQLGH-ALAT---TDLLT--N--EQKQAIFYDNAHRLLTE 307 (307)
T ss_dssp TTTSCGGGEECCCC---TTTS---CHHHHHHHHH-HHHH---CTTSC--H--HHHHHHHTHHHHHHHHC
T ss_pred HHhcCcccEEEecC---CCCC---CchhHHHHHH-HHhh---ccCCC--H--HHHHHHHHHHHHHHhCc
Confidence 89999999999999 5532 1111122221 1111 12344 3 67999999999999975
No 27
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=99.39 E-value=5.4e-13 Score=142.54 Aligned_cols=170 Identities=21% Similarity=0.236 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHhc-C-CCCc----cCchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCC-CCCc-----------
Q 005411 187 KKDAEEGLAEDLRS-G-KPVR----ITNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR-LSNP----------- 248 (698)
Q Consensus 187 ~~ea~~~~~~~l~~-~-~~~~----~~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~-~~~p----------- 248 (698)
.+++.+.+++++.. + .+.+ ..+..+.|..+.++|+.|+++|+||.+|++....+..+. +..|
T Consensus 122 ~~~a~~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (336)
T 2wm1_A 122 PELAVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWDMQMDGRMAKYWLPWLVGMPAETTI 201 (336)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECCSCCCSGGGSSTTHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCCCCccccccccchHHHhccHHHHHH
Confidence 34555566666642 1 2221 133567788899999999999999999998642111111 1111
Q ss_pred ----cchHHHHhhcCCCCcEEEEecCC--CcchHHHH--------HH---------HHhCCeeeeecccccCcccHHHHH
Q 005411 249 ----LHLRAILEDKRFSKCRFVLLHAS--YPFSKEAS--------YL---------AYVYPQVYLDFGLAIPKLSVQGMI 305 (698)
Q Consensus 249 ----~~L~~l~~~~~~P~~~~vllH~g--~p~~~e~~--------~l---------a~~~pnVy~d~s~~~~~~~~~g~~ 305 (698)
+.+..+++ +||+++||+.|+| .|+..+.. .+ ...+.|+|+|++ .+ . .
T Consensus 202 ~~~~l~~~~v~~--~~P~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~l~~~p~~~~~~~~~ds~-~~---~----~ 271 (336)
T 2wm1_A 202 AICSMIMGGVFE--KFPKLKVCFAHGGGAFPFTVGRISHGFSMRPDLCAQDNPMNPKKYLGSFYTDAL-VH---D----P 271 (336)
T ss_dssp HHHHHHHTTHHH--HCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHSSSCCSCGGGGTTSSEEECC-CC---S----H
T ss_pred HHHHHHHcCchh--hCCCCeEehhcccchHHHHHHHHHhhhhhChhhhhccCCCCHHHHHHhhEEEec-cc---C----H
Confidence 12566788 7999999999997 45442211 22 223359999954 32 1 2
Q ss_pred HHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhc-CCCChhHHHHHHHHHHHHHHHHHhcCCCC
Q 005411 306 SSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCID-EDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (698)
Q Consensus 306 ~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~-g~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (698)
..++.+++..|.+||||||| ||... ...... +.++. ..++ + +.+++|+++||+|||+++.+
T Consensus 272 ~~l~~~i~~~g~drilfGSD---~P~~~--~~~~~~--------~~l~~~~~l~--~--~~~~~i~~~NA~rl~~l~~~ 333 (336)
T 2wm1_A 272 LSLKLLTDVIGKDKVILGTD---YPFPL--GELEPG--------KLIESMEEFD--E--ETKNKLKAGNALAFLGLERK 333 (336)
T ss_dssp HHHHHHHHHHCTTSEECCCC---BTSTT--SCSSTT--------HHHHTCTTSC--H--HHHHHHHTHHHHHHHTCCC-
T ss_pred HHHHHHHHHhCCccEEEeCC---CCCCc--CCcCHH--------HHHHhccCCC--H--HHHHHHHHHHHHHHhCcCcc
Confidence 46778888889999999999 55321 110011 11222 2344 4 67999999999999999643
No 28
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=99.35 E-value=1.5e-12 Score=139.10 Aligned_cols=147 Identities=20% Similarity=0.298 Sum_probs=96.2
Q ss_pred chhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCC-CCC------c---------cchHHHHhhcCCCC-cEEEEecC
Q 005411 208 NKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR-LSN------P---------LHLRAILEDKRFSK-CRFVLLHA 270 (698)
Q Consensus 208 ~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~-~~~------p---------~~L~~l~~~~~~P~-~~~vllH~ 270 (698)
+..+.|..+.++|+.|+++|+||.+|++....+..+. +.. | +.+..+++ +||+ ++||+.|+
T Consensus 152 ~~~l~d~~~~p~~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~v~~--~~P~~l~~v~~H~ 229 (334)
T 2hbv_A 152 DKDLDDATLEAFLTHCANEDIPILVHPWDMMGGQRMKKWMLPWLVAMPAETQLAILSLILSGAFE--RIPKSLKICFGHG 229 (334)
T ss_dssp TBCTTSHHHHHHHHHHHHTTCCEEEECCSCSCTTTTCSTTHHHHTHHHHHHHHHHHHHHHTTGGG--TSCTTCCEEESGG
T ss_pred CCCCCcHHHHHHHHHHHHCCCEEEECCCCCCCCcchhhhhhhhhhhcHHHHHHHHHHHHHcCchh--hCCCcceEEeecc
Confidence 4567788999999999999999999998642211111 111 1 12567777 8999 99999999
Q ss_pred CC--cchHHHH-------HH---------HHhCCeeeeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc
Q 005411 271 SY--PFSKEAS-------YL---------AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET 332 (698)
Q Consensus 271 g~--p~~~e~~-------~l---------a~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~ 332 (698)
|. |+..+.. .+ ...++|+|+|++ .+. ...++.+++..|.+||||||| ||..
T Consensus 230 Gg~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~y~ds~-~~~-------~~~l~~~~~~~g~drilfGSD---~P~~ 298 (334)
T 2hbv_A 230 GGSFAFLLGRVDNAWRHRDIVREDCPRPPSEYVDRFFVDSA-VFN-------PGALELLVSVMGEDRVMLGSD---YPFP 298 (334)
T ss_dssp GTTHHHHHHHHHHHHHHCHHHHTTCCSCGGGGGGGCEEECC-CSS-------HHHHHHHHHHHCGGGEECCCC---BTST
T ss_pred cchHHHHHHHHHhhhhcccccccccCCCHHHHHhhhEEEec-cCC-------HHHHHHHHHHhCcccEEEeCC---CCCC
Confidence 73 4432211 11 112359999954 321 246788888889999999999 5532
Q ss_pred hhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005411 333 YFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 333 ~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
. ... +. .+.++...++ + +.+++|+++||+|||+++
T Consensus 299 ~--~~~---~~-----~~~l~~~~l~--~--~~~~~i~~~NA~rl~~l~ 333 (334)
T 2hbv_A 299 L--GEQ---KI-----GGLVLSSNLG--E--SAKDKIISGNASKFFNIN 333 (334)
T ss_dssp T--SCS---ST-----THHHHTSSCC--H--HHHHHHHTHHHHHHHTCC
T ss_pred C--CCc---CH-----hhHhhhcCCC--H--HHHHHHHhHHHHHHhCCC
Confidence 1 110 00 0112222454 3 679999999999999985
No 29
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=99.29 E-value=2.3e-12 Score=141.95 Aligned_cols=170 Identities=19% Similarity=0.175 Sum_probs=101.4
Q ss_pred CHHHHHHHHHHHHhcC-CCCcc---------CchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCC----------CCCCC
Q 005411 186 TKKDAEEGLAEDLRSG-KPVRI---------TNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKD----------LDLRL 245 (698)
Q Consensus 186 ~~~ea~~~~~~~l~~~-~~~~~---------~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~----------~~~~~ 245 (698)
+.+.+.+.++++...+ .+.++ ....+.|..+.|+|+.|+|+|+||++|+|.+... ....+
T Consensus 173 d~~~a~~EL~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~~~~~~~~~~~~~~~~~~~ 252 (423)
T 4dzi_A 173 DPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDSGYLHIAAAWGGKSTFEGF 252 (423)
T ss_dssp SHHHHHHHHHHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCCSTHHHHHHTTCC------
T ss_pred CHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCCCccccccccccccccccc
Confidence 4555666666666532 23333 2466888999999999999999999999974210 00111
Q ss_pred C--Ccc-----------------chHHHHhhcCCCCcEEEEecCCCcchHHHH----HHHHhC-------------Ceee
Q 005411 246 S--NPL-----------------HLRAILEDKRFSKCRFVLLHASYPFSKEAS----YLAYVY-------------PQVY 289 (698)
Q Consensus 246 ~--~p~-----------------~L~~l~~~~~~P~~~~vllH~g~p~~~e~~----~la~~~-------------pnVy 289 (698)
. .|. .+..+++ |||++|||+.|+|..|..... ...... .|+|
T Consensus 253 ~~~~~~~~~~~~~~~~~~a~~~Li~sGvf~--RfP~Lkiil~h~Gg~wlP~~l~Rld~~~~~~~~~~~~~Pse~~r~n~y 330 (423)
T 4dzi_A 253 GAKDPLDQVLLDDRAIHDTMASMIVHGVFT--RHPKLKAVSIENGSYFVHRLIKRLKKAANTQPQYFPEDPVEQLRNNVW 330 (423)
T ss_dssp -CCCHHHHHHHTTHHHHHHHHHHHHTTHHH--HCTTCCEEEESSCSTHHHHHHHHHHHHHHHCGGGCSSCHHHHHHHHEE
T ss_pred cccchhHHHhccchHHHHHHHHHHHcCchh--hCCCCeEEEeCCCcchHHHHHHHHHHHHHhCccccCCCHHHHHhhCeE
Confidence 1 111 1235666 899999999999865532211 111111 2788
Q ss_pred eecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhc-CCCChhHHHHHHHH
Q 005411 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCID-EDLSVGEAIEVAKD 368 (698)
Q Consensus 290 ~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~-g~l~~~ea~~~~~~ 368 (698)
+++ +. . ..+..+++..|.+||||||| ||...-... . .+++++ ..++ + +.+++
T Consensus 331 ~t~---~~---~----~~l~~~~~~~G~drilfgSD---yP~~~~~~~--~--------~~~~~~l~~l~--~--~~~~~ 383 (423)
T 4dzi_A 331 IAP---YY---E----DDLPELARVIGVDKILFGSD---WPHGEGLAS--P--------VSFTAELKGFS--E--SDIRK 383 (423)
T ss_dssp ECC---CT---T----SCHHHHHHHHCGGGBCCCCC---BTSTTSCSS--G--------GGGGGGCTTSC--H--HHHHH
T ss_pred Eee---cC---h----HHHHHHHHHcCcceEEEecC---CCCccCccC--H--------HHHHHHhcCCC--H--HHHHH
Confidence 753 11 1 24567788889999999999 664211000 0 122222 2344 4 67999
Q ss_pred HHHHHHHHHhcCCCCc
Q 005411 369 IFALNAAQFYKINLGV 384 (698)
Q Consensus 369 Il~~NA~rly~l~~~~ 384 (698)
|+++||+|||+|+...
T Consensus 384 I~~~NA~rl~~l~~~~ 399 (423)
T 4dzi_A 384 IMRDNALDLLGVQVGS 399 (423)
T ss_dssp HHTHHHHHHHC-----
T ss_pred HHHHHHHHHHCCCccc
Confidence 9999999999997543
No 30
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=99.28 E-value=1.9e-12 Score=139.33 Aligned_cols=154 Identities=18% Similarity=0.226 Sum_probs=96.0
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCC-C---CCCCCCCcc-------chHHHHhhcCCCCcEEEEecCC--Ccch
Q 005411 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDK-D---LDLRLSNPL-------HLRAILEDKRFSKCRFVLLHAS--YPFS 275 (698)
Q Consensus 209 ~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~-~---~~~~~~~p~-------~L~~l~~~~~~P~~~~vllH~g--~p~~ 275 (698)
..+.+..+.++|+.|+++|+||.+|++.+.. . ....+..+. .+..+++ +||+++||+.|+| .|+.
T Consensus 154 ~~l~d~~~~p~~~~a~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~--~~P~l~~vi~H~Gg~~p~~ 231 (350)
T 2gwg_A 154 PPLTDRIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFK--DFPELKFVIPHGGGAVPYH 231 (350)
T ss_dssp CCTTSGGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHH--HCTTCCEEESGGGTTTGGG
T ss_pred CCCCCHHHHHHHHHHHHcCCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccc--cCCCCcEEeccCCCcchhh
Confidence 4578888999999999999999999986421 0 001111111 1346777 7999999999997 4655
Q ss_pred H----HHHH-H------HHhCCeeeeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh-HHHHHHH
Q 005411 276 K----EASY-L------AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG-AKRAREV 343 (698)
Q Consensus 276 ~----e~~~-l------a~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~-~~~~R~~ 343 (698)
. .... + ...++|||+|+|... . ..++.+++..|.+|||||||++..+....+. ..++..
T Consensus 232 ~~r~~~~~~~~~~~~l~~~~~~n~y~d~s~~~----~----~~l~~l~~~~g~dril~gSD~P~~~~~~~p~~~~~~~~- 302 (350)
T 2gwg_A 232 WGRFRGLAQEMKKPLLEDHVLNNIFFDTCVYH----Q----PGIDLLNTVIPVDNVLFASEMIGAVRGIDPRTGFYYDD- 302 (350)
T ss_dssp HHHHHHHHHHTTCCCHHHHTTTTEEEECCCCS----H----HHHHHHHHHSCGGGEECCCCCSSSCCCEETTTTEETTC-
T ss_pred HHHHHHHHHhccCCCcHHHHhhcEEEEecccC----c----HHHHHHHHHhCcccEEEecCCCCCcccCCcccccchhh-
Confidence 2 1111 2 246799999999732 1 3577888999999999999943211000000 000000
Q ss_pred HHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcC
Q 005411 344 VFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (698)
Q Consensus 344 l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (698)
..+.+.+. ..++ + +.+++|+++||+|||++
T Consensus 303 ~~~~l~~~---~~l~--~--~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 303 TKRYIEAS---TILT--P--EEKQQIYEGNARRVYPR 332 (350)
T ss_dssp THHHHHHC---SSSC--H--HHHHHHHTHHHHHHCHH
T ss_pred HHHHHHhc---cCCC--H--HHHHHHHHHHHHHHHHh
Confidence 01112210 2344 3 67999999999999986
No 31
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=99.26 E-value=1.4e-11 Score=126.63 Aligned_cols=147 Identities=18% Similarity=0.200 Sum_probs=95.3
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC--CcEEEEecCCCcchHHHHHHHHhCC
Q 005411 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (698)
Q Consensus 209 ~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P--~~~~vllH~g~p~~~e~~~la~~~p 286 (698)
..+.+..+.++++.|+++|+||.+|++.. +..+.++++ ++| ++++|+ |++......+..++ .++
T Consensus 104 ~~~~~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~--~~p~~~~~~i~-H~~~g~~~~~~~~l-~~~ 169 (265)
T 2gzx_A 104 ADVQKEVFRKQIALAKRLKLPIIIHNREA----------TQDCIDILL--EEHAEEVGGIM-HSFSGSPEIADIVT-NKL 169 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--HTTGGGTCEEE-TTCCSCHHHHHHHH-HTS
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeccc----------HHHHHHHHH--hcCCCCCcEEE-EcCCCCHHHHHHHH-HHC
Confidence 35566778888999999999999999742 234566777 699 899985 55433445555555 468
Q ss_pred eeeeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhh----hHHHHHHHHHHHHHhhhhcCCCChhHH
Q 005411 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFL----GAKRAREVVFSVLRDTCIDEDLSVGEA 362 (698)
Q Consensus 287 nVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~----~~~~~R~~l~~vl~~~v~~g~l~~~ea 362 (698)
|||+++|++...... ..++++++.+|.+|+|||||++......+. ...+.+..+ ..+.++ ..++.
T Consensus 170 ~~y~~~sg~~~~~~~----~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~-~~l~~~---~~~~~--- 238 (265)
T 2gzx_A 170 NFYISLGGPVTFKNA----KQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVA-EQIAEL---KGLSY--- 238 (265)
T ss_dssp CCEEEECGGGGCSSC----CHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHH-HHHHHH---TTCCH---
T ss_pred CceEEecceeecCCc----HHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHH-HHHHHH---hCCCH---
Confidence 999999987543211 257788889999999999995422100000 001122211 112111 23543
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 005411 363 IEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 363 ~~~~~~Il~~NA~rly~l~ 381 (698)
+.+++|+++||+|+|++.
T Consensus 239 -~~~~~i~~~Na~rl~~~~ 256 (265)
T 2gzx_A 239 -EEVCEQTTKNAEKLFNLN 256 (265)
T ss_dssp -HHHHHHHHHHHHHHHC--
T ss_pred -HHHHHHHHHHHHHHhCCc
Confidence 679999999999999985
No 32
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=99.23 E-value=1.9e-11 Score=126.52 Aligned_cols=146 Identities=20% Similarity=0.179 Sum_probs=98.0
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC--CcEEEEecCCCcchHHHHHHHHhCC
Q 005411 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (698)
Q Consensus 209 ~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P--~~~~vllH~g~p~~~e~~~la~~~p 286 (698)
..+++..+.+.+++|.++|+||.+|++.. +..+.++++ ++| ++++|+ |+...+...+..++. .
T Consensus 115 ~~~q~~~f~~~~~~a~~~~lPv~iH~~~~----------~~~~~~il~--~~p~~~~~~I~-H~~~g~~~~~~~~~~--~ 179 (268)
T 1j6o_A 115 AEVQKRVFVEQIELAGKLNLPLVVHIRDA----------YSEAYEILR--TESLPEKRGVI-HAFSSDYEWAKKFID--L 179 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--HSCCCSSCEEE-TTCCSCHHHHHHHHH--H
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEeCch----------HHHHHHHHH--hcCCCCCCEEE-EcCCCCHHHHHHHHH--C
Confidence 45667778888999999999999999732 334556777 688 999999 985555555555555 3
Q ss_pred eeeeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh----HHHHHHHHHHHHHhhhhcCCCChhHH
Q 005411 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEA 362 (698)
Q Consensus 287 nVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~----~~~~R~~l~~vl~~~v~~g~l~~~ea 362 (698)
|+|+++|+++.+.. ...++++++..|.+||||+||++..+-..+.+ ..++.+.+. .+.+. ..++.
T Consensus 180 g~y~~~sg~~~~~~----~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~-~la~~---~~~~~--- 248 (268)
T 1j6o_A 180 GFLLGIGGPVTYPK----NEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVE-TISQV---LGVPE--- 248 (268)
T ss_dssp TEEEEECGGGGCTT----CHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHH-HHHHH---HTSCH---
T ss_pred CCeEEecccccccc----hHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHH-HHHHH---hCcCH---
Confidence 99999998764321 13577888889999999999954321100000 011222221 11111 13443
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 005411 363 IEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 363 ~~~~~~Il~~NA~rly~l~ 381 (698)
+.+++|+++||+|+|++.
T Consensus 249 -e~~~~i~~~Na~rlf~l~ 266 (268)
T 1j6o_A 249 -AKVDEATTENARRIFLEV 266 (268)
T ss_dssp -HHHHHHHHHHHHHHHHSC
T ss_pred -HHHHHHHHHHHHHHhCcc
Confidence 568999999999999985
No 33
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=99.07 E-value=2.7e-10 Score=117.00 Aligned_cols=147 Identities=20% Similarity=0.253 Sum_probs=96.4
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCee
Q 005411 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (698)
Q Consensus 209 ~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnV 288 (698)
..+.+..+.+.+++|.++|+||.+|++.. +..+.++++..++|++++|+ |+..++..++..++. .|+
T Consensus 106 ~~~q~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~~~~~p~~~~v~-H~~~~~~~~~~~~~~--~g~ 172 (265)
T 1yix_A 106 KVRQQESFIHHIQIGRELNKPVIVHTRDA----------RADTLAILREEKVTDCGGVL-HCFTEDRETAGKLLD--LGF 172 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHHHTTGGGTCEEE-TTCCSCHHHHHHHHT--TTC
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEecCc----------hHHHHHHHHhcCCCCCCEEE-EcCCCCHHHHHHHHH--CCc
Confidence 45566678888999999999999999732 23455566643468999987 996556555555554 399
Q ss_pred eeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCC-ccc-----hhhhHHHHHHHHHHHHHhhhhcCCCChhHH
Q 005411 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PET-----YFLGAKRAREVVFSVLRDTCIDEDLSVGEA 362 (698)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-P~~-----~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea 362 (698)
|+++++++.+.. ...++++++..|.+|+|||||++.. |.. ..+. .+.+.+. .+.+. ..++.
T Consensus 173 ~~~~sg~~~~~~----~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~--~l~~~~~-~l~~~---~~~~~--- 239 (265)
T 1yix_A 173 YISFSGIVTFRN----AEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPA--MVRDVAE-YMAVL---KGVAV--- 239 (265)
T ss_dssp EEEECGGGGSTT----CHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGG--GHHHHHH-HHHHH---HTSCH---
T ss_pred EEEECCccccCc----hHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchH--HHHHHHH-HHHHH---hCcCH---
Confidence 999998654321 1356788888999999999995422 110 0000 1122221 11111 13443
Q ss_pred HHHHHHHHHHHHHHHhcCCC
Q 005411 363 IEVAKDIFALNAAQFYKINL 382 (698)
Q Consensus 363 ~~~~~~Il~~NA~rly~l~~ 382 (698)
+.+++|+++||+|+|+++.
T Consensus 240 -~~~~~i~~~Na~rl~~l~~ 258 (265)
T 1yix_A 240 -EELAQVTTDNFARLFHIDA 258 (265)
T ss_dssp -HHHHHHHHHHHHHHTTCCG
T ss_pred -HHHHHHHHHHHHHHhCcCh
Confidence 5689999999999999964
No 34
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.85 E-value=6.8e-09 Score=106.32 Aligned_cols=145 Identities=18% Similarity=0.204 Sum_probs=88.7
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC-CcEEEEecCCCcchHHHHHHHHhCCee
Q 005411 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-KCRFVLLHASYPFSKEASYLAYVYPQV 288 (698)
Q Consensus 210 ~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P-~~~~vllH~g~p~~~e~~~la~~~pnV 288 (698)
...+..+.+.+++|.++|+||.+|++.. ...+.++++ ++| +.++|+ |+-......+..++. .|+
T Consensus 110 ~~q~~~f~~~~~~a~~~~~Pv~iH~~~a----------~~~~~~il~--~~~~~~~~i~-H~~~g~~~~~~~~~~--~g~ 174 (259)
T 1zzm_A 110 ERQQWLLDEQLKLAKRYDLPVILHSRRT----------HDKLAMHLK--RHDLPRTGVV-HGFSGSLQQAERFVQ--LGY 174 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEESC----------HHHHHHHHH--HHCCTTCEEE-TTCCSCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeccc----------HHHHHHHHH--hcCCCCCEEE-EcCCCCHHHHHHHHH--CCC
Confidence 4445567778999999999999999742 123445666 343 466766 973222333334443 599
Q ss_pred eeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh----HHHHHHHHHHHHHhhhhcCCCChhHHHH
Q 005411 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (698)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~----~~~~R~~l~~vl~~~v~~g~l~~~ea~~ 364 (698)
|++++++..+.. ...++++++..|.+|||++||++..+-..+-+ ..+..+.+ ....+...++. +
T Consensus 175 ~i~~~g~~~~~~----~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~----~~la~~~g~~~----e 242 (259)
T 1zzm_A 175 KIGVGGTITYPR----ASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVF----AVLCELRREPA----D 242 (259)
T ss_dssp EEEECGGGGCTT----TCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHH----HHHHHHCSSCH----H
T ss_pred EEEECceeeccc----cHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHH----HHHHHHHCcCH----H
Confidence 999998764211 12466777889999999999965321100000 01122222 11112224554 5
Q ss_pred HHHHHHHHHHHHHhcCC
Q 005411 365 VAKDIFALNAAQFYKIN 381 (698)
Q Consensus 365 ~~~~Il~~NA~rly~l~ 381 (698)
.+.+++++||+|+|+|+
T Consensus 243 ~~~~~~~~Na~rl~~l~ 259 (259)
T 1zzm_A 243 EIAQALLNNTYTLFNVP 259 (259)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 68899999999999974
No 35
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.81 E-value=2.5e-08 Score=102.32 Aligned_cols=145 Identities=17% Similarity=0.167 Sum_probs=90.2
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC--CcEEEEecCCCcchHHHHHHHHhCCe
Q 005411 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYPQ 287 (698)
Q Consensus 210 ~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P--~~~~vllH~g~p~~~e~~~la~~~pn 287 (698)
...+..+.+.+++|.++|+||.+|++.. ...+-++++ ++| ..++|+ |+.......+..++.. |
T Consensus 108 ~~q~~~f~~~l~~a~~~~lpv~iH~~~a----------~~~~~~il~--~~~~~~~~~v~-H~~~g~~~~~~~~~~~--g 172 (264)
T 1xwy_A 108 EEQERAFVAQLRIAADLNMPVFMHCRDA----------HERFMTLLE--PWLDKLPGAVL-HCFTGTREEMQACVAH--G 172 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHG--GGGGGSSCEEE-CSCCCCHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCc----------hHHHHHHHH--hcCCCCCcEEE-EccCCCHHHHHHHHHC--C
Confidence 3445566777999999999999999631 112335666 455 778877 9732233344445443 9
Q ss_pred eeeecccccC-cccHHHHHHHHHHHHhhCCCCcEEEecCCCCC-cc---chhhh----HHHHHHHHHHHHHhhhhcCCCC
Q 005411 288 VYLDFGLAIP-KLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PE---TYFLG----AKRAREVVFSVLRDTCIDEDLS 358 (698)
Q Consensus 288 Vy~d~s~~~~-~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-P~---~~~~~----~~~~R~~l~~vl~~~v~~g~l~ 358 (698)
+|++++++.. +-. ...++++++..|.+|+||+||++.. |. ..+-+ ..++.+.+.. +.+ ...++
T Consensus 173 ~yi~~~g~~~~~~~----~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~-~a~---~~g~~ 244 (264)
T 1xwy_A 173 IYIGITGWVCDERR----GLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQR-IAH---WRGED 244 (264)
T ss_dssp CEEEECGGGGCTTT----SHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHH-HHH---HHTCC
T ss_pred eEEEECccccCCcC----cHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHH-HHH---HHCcC
Confidence 9999998764 211 1357788899999999999996532 21 00000 0112222211 111 11355
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCC
Q 005411 359 VGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 359 ~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
. +.+.+|+++||+|+|+++
T Consensus 245 ~----e~~~~~~~~Na~rl~~l~ 263 (264)
T 1xwy_A 245 A----AWLAATTDANVKTLFGIA 263 (264)
T ss_dssp H----HHHHHHHHHHHHHHHCCC
T ss_pred H----HHHHHHHHHHHHHHhCcc
Confidence 4 568899999999999985
No 36
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.74 E-value=8.9e-08 Score=98.73 Aligned_cols=142 Identities=16% Similarity=0.154 Sum_probs=89.1
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeee
Q 005411 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (698)
Q Consensus 211 l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~ 290 (698)
..+..|.+.+++|.++|+||.+|++.. ...+-++++ ++|..++|+ |+-......+..++. .|+|+
T Consensus 123 ~q~~~f~~~~~la~~~~lPv~iH~~~a----------~~~~~~il~--~~~~~~~v~-H~~~g~~~~~~~~~~--~g~~i 187 (272)
T 2y1h_A 123 EQRQVLIRQIQLAKRLNLPVNVHSRSA----------GRPTINLLQ--EQGAEKVLL-HAFDGRPSVAMEGVR--AGYFF 187 (272)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECTTC----------HHHHHHHHH--HTTCCSEEE-ETCCSCHHHHHHHHH--TTCEE
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCc----------HHHHHHHHH--hCCCCCEEE-EccCCCHHHHHHHHH--CCCEE
Confidence 344566777999999999999999742 112335677 588788888 872222233334443 49999
Q ss_pred ecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchh--hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHH
Q 005411 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF--LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKD 368 (698)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~--~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~ 368 (698)
+++++..+ + ..++++++..|.+|+|++||++..+..-. ....+.+..+ ..+.+. ..++. +.+.+
T Consensus 188 ~~~g~~~~-~-----~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~-~~la~~---~g~~~----e~~~~ 253 (272)
T 2y1h_A 188 SIPPSIIR-S-----GQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISA-EYIAQV---KGISV----EEVIE 253 (272)
T ss_dssp EECGGGGT-C-----HHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHH-HHHHHH---HTSCH----HHHHH
T ss_pred EECCcccC-c-----HHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHH-HHHHHH---HCcCH----HHHHH
Confidence 99987632 1 25778888899999999999653311000 0001122222 111111 13443 56899
Q ss_pred HHHHHHHHHhcCC
Q 005411 369 IFALNAAQFYKIN 381 (698)
Q Consensus 369 Il~~NA~rly~l~ 381 (698)
++++||+|+|++.
T Consensus 254 ~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 254 VTTQNALKLFPKL 266 (272)
T ss_dssp HHHHHHHHHSTTH
T ss_pred HHHHHHHHHHHhH
Confidence 9999999999974
No 37
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.44 E-value=1.3e-06 Score=90.44 Aligned_cols=147 Identities=16% Similarity=0.198 Sum_probs=85.6
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCc-chHHHHHHHHhCCeeeeecc
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP-FSKEASYLAYVYPQVYLDFG 293 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p-~~~e~~~la~~~pnVy~d~s 293 (698)
.+...+++|.++|+||++|++.+.. .+..+ ++++....|..++++.|++++ ....+..++.. ++|+.++
T Consensus 139 ~~~~~~~~a~~~~~pv~iH~~~~~~-------~~~~~-~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~--G~~i~~~ 208 (291)
T 1bf6_A 139 VFIAAALAHNQTGRPISTHTSFSTM-------GLEQL-ALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDL--GAYVQFD 208 (291)
T ss_dssp HHHHHHHHHHHHCCCEEEECGGGCS-------HHHHH-HHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHT--TCEEEEC
T ss_pred HHHHHHHHHHHHCCeEEEeCCCCCC-------hHHHH-HHHHHcCCCchhEEEECCCCCCCHHHHHHHHHC--CCEEEEc
Confidence 3455678899999999999974310 11223 445533567889999999753 34445555554 4555444
Q ss_pred cc--cCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc-hhhh--HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHH
Q 005411 294 LA--IPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET-YFLG--AKRAREVVFSVLRDTCIDEDLSVGEAIEVAKD 368 (698)
Q Consensus 294 ~~--~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~-~~~~--~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~ 368 (698)
.. ....+...-...++++++.++.+||+++||++..+.. .+.+ ... .+..++..+ ....++. +.+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~---~~~~~~~~l-~~~g~~~----~~~~~ 280 (291)
T 1bf6_A 209 TIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDY---LLTTFIPQL-RQSGFSQ----ADVDV 280 (291)
T ss_dssp CTTCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTH---HHHTHHHHH-HHTTCCH----HHHHH
T ss_pred cCcccCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHH---HHHHHHHHH-HHcCCCH----HHHHH
Confidence 32 1111111123478888999999999999996532210 0000 011 111122222 2223554 56899
Q ss_pred HHHHHHHHHhc
Q 005411 369 IFALNAAQFYK 379 (698)
Q Consensus 369 Il~~NA~rly~ 379 (698)
++.+|++|+|+
T Consensus 281 ~~~~N~~rl~~ 291 (291)
T 1bf6_A 281 MLRENPSQFFQ 291 (291)
T ss_dssp HHTHHHHHHCC
T ss_pred HHHHhHHHHhC
Confidence 99999999985
No 38
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.41 E-value=1.7e-06 Score=90.81 Aligned_cols=144 Identities=17% Similarity=0.161 Sum_probs=83.7
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCC-CcEEEEecCCCcchHHHHHHHHhCCeee
Q 005411 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-KCRFVLLHASYPFSKEASYLAYVYPQVY 289 (698)
Q Consensus 211 l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P-~~~~vllH~g~p~~~e~~~la~~~pnVy 289 (698)
.....|.+.+++|.++|+||.+|++.. ...+-++++ ++| +..-++.|+-......+..+.. .|+|
T Consensus 124 ~Q~~~f~~ql~lA~~~~lPv~iH~r~a----------~~~~~~il~--~~~~~~~~~i~H~f~g~~~~~~~~l~--~g~y 189 (301)
T 2xio_A 124 TQLKYFEKQFELSEQTKLPMFLHCRNS----------HAEFLDITK--RNRDRCVGGVVHSFDGTKEAAAALID--LDLY 189 (301)
T ss_dssp HHHHHHHHTHHHHHHHCCCEEEEEESC----------HHHHHHHHH--HTGGGSSCEEETTCCCCHHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEecCc----------hHHHHHHHH--hccCCCCcEEEEccCCCHHHHHHHHh--cCcE
Confidence 334456667899999999999999631 122445666 354 2223448982222233333433 3899
Q ss_pred eecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCC----------------cc---ch----h---hhHHHHHHH
Q 005411 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS----------------PE---TY----F---LGAKRAREV 343 (698)
Q Consensus 290 ~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~----------------P~---~~----~---~~~~~~R~~ 343 (698)
+++++.. +- . . ...++++..|.+|||++||++.. |. .+ + ....+...+
T Consensus 190 i~~~g~~-~~-~-~---~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~~ 263 (301)
T 2xio_A 190 IGFNGCS-LK-T-E---ANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQI 263 (301)
T ss_dssp EEECGGG-SS-S-H---HHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHHH
T ss_pred EEEcccc-cC-C-h---HHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHHH
Confidence 9999862 21 1 1 12477888999999999997642 21 00 0 000111222
Q ss_pred HHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005411 344 VFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (698)
Q Consensus 344 l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (698)
+ +.+.+. ..++. +.+.+++++||+|+|+++.
T Consensus 264 ~-~~ia~l---~g~~~----e~~~~~~~~Na~rlf~~~~ 294 (301)
T 2xio_A 264 L-EIMSAV---RDEDP----LELANTLYNNTIKVFFPVI 294 (301)
T ss_dssp H-HHHHHH---HTCCH----HHHHHHHHHHHHHHHCCC-
T ss_pred H-HHHHHH---HCcCH----HHHHHHHHHHHHHHhCchh
Confidence 2 222221 13554 5689999999999999853
No 39
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.31 E-value=1.9e-06 Score=89.84 Aligned_cols=152 Identities=17% Similarity=0.106 Sum_probs=87.8
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCC--cEEEEecCCCcchHHHHHHHHhCCeee
Q 005411 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSK--CRFVLLHASYPFSKEASYLAYVYPQVY 289 (698)
Q Consensus 212 ~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~--~~~vllH~g~p~~~e~~~la~~~pnVy 289 (698)
....|...+++|.++|+||.+|+... ...+-++++ +++. .++|+ |+-..-..++..+.. -++|
T Consensus 112 Q~~~F~~ql~lA~e~~lPv~iH~r~a----------~~~~l~il~--~~~~~~~~~V~-H~fsG~~e~a~~~l~--~G~y 176 (287)
T 3rcm_A 112 QEKALEAQLTLAAQLRLPVFLHERDA----------SERLLAILK--DYRDHLTGAVV-HCFTGEREALFAYLD--LDLH 176 (287)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--TTGGGCSCEEE-CSCCCCHHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCc----------HHHHHHHHH--HcCCCCCeEEE-EeCCCCHHHHHHHHH--CCcE
Confidence 33445556889999999999999742 122445666 4543 35555 872112233333333 3899
Q ss_pred eecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchh----hh----HHHHHHHHHHHHHhhhhcCCCChhH
Q 005411 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF----LG----AKRAREVVFSVLRDTCIDEDLSVGE 361 (698)
Q Consensus 290 ~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~----~~----~~~~R~~l~~vl~~~v~~g~l~~~e 361 (698)
+++++++.+. +. ...+++++...|.+|+|+.||++..+-..+ -+ ..+...++ +.+++ ...++.
T Consensus 177 is~~g~i~~~-k~--~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~-~~lA~---~~g~s~-- 247 (287)
T 3rcm_A 177 IGITGWICDE-RR--GTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVL-REVAL---HRGESA-- 247 (287)
T ss_dssp EEECGGGGCT-TT--CGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHH-HHHHH---HHTSCH--
T ss_pred EEECchhccc-cC--HHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHH-HHHHH---HhCcCH--
Confidence 9999876431 11 125778888999999999999764321001 00 00122222 12221 123554
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcccccC
Q 005411 362 AIEVAKDIFALNAAQFYKINLGVKDFAS 389 (698)
Q Consensus 362 a~~~~~~Il~~NA~rly~l~~~~~~~~~ 389 (698)
+.+..+.++|++|+|+++....-|+|
T Consensus 248 --eev~~~~~~N~~rlf~l~~~~~~~~~ 273 (287)
T 3rcm_A 248 --EHTAAHTTATARDFFQLPAENLYFQS 273 (287)
T ss_dssp --HHHHHHHHHHHHHHTTCCCCC-----
T ss_pred --HHHHHHHHHHHHHHHCCChhhhHHhh
Confidence 56889999999999999876654443
No 40
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.24 E-value=6.9e-06 Score=88.27 Aligned_cols=151 Identities=16% Similarity=0.067 Sum_probs=90.1
Q ss_pred HHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCC-cchHHHHHHH-HhCCeeeeeccccc
Q 005411 219 SLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLA-YVYPQVYLDFGLAI 296 (698)
Q Consensus 219 ~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~-p~~~e~~~la-~~~pnVy~d~s~~~ 296 (698)
.++++.+.|+||.+|++.|.. + ...+ +++++...|..++++.|++. +....+..++ .. ..|++++...
T Consensus 174 q~~~A~e~glPViiH~r~gr~------a-~d~l-~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~--G~yI~f~g~~ 243 (363)
T 3ovg_A 174 AARTSILTGCPILVHTQLGTM------A-LEVA-KHLIGFGANPDKIQISHLNKNPDKYYYEKVIKET--GVTLCFDGPD 243 (363)
T ss_dssp HHHHHHHHCCCEEEEEETTCS------H-HHHH-HHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHH--CCEEEECCTT
T ss_pred HHHHHHHhCCEEEEeCCCCCC------H-HHHH-HHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHC--CcEEEECCee
Confidence 367788999999999986521 1 1223 55654456777899999962 3333333444 22 5788777653
Q ss_pred C--cccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHH-----HHHHHHHHHHhhhhcCCCChhHHHHHHHHH
Q 005411 297 P--KLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKR-----AREVVFSVLRDTCIDEDLSVGEAIEVAKDI 369 (698)
Q Consensus 297 ~--~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~-----~R~~l~~vl~~~v~~g~l~~~ea~~~~~~I 369 (698)
. +.+...-.+.++++++.++.+|||++||++..|...+.+... --..+-.++...++...++. +.+.++
T Consensus 244 ~~~~~~~~~ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p~~l~~~~~~~a~~rGis~----eei~~i 319 (363)
T 3ovg_A 244 RVKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGLAYLFDRFLPLLKQVGVSK----EAIFDI 319 (363)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCTHHHHHTHHHHHHHHTCCH----HHHHHH
T ss_pred ccccCChhHHHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCccHHHHHHHHHHHHcCCCH----HHHHHH
Confidence 1 111111234789999999999999999987433211111100 00011122222333334554 569999
Q ss_pred HHHHHHHHhcCCCC
Q 005411 370 FALNAAQFYKINLG 383 (698)
Q Consensus 370 l~~NA~rly~l~~~ 383 (698)
+.+|++|+|++...
T Consensus 320 t~~Np~rlf~l~~~ 333 (363)
T 3ovg_A 320 LVNNPKRVLAFDEK 333 (363)
T ss_dssp HTHHHHHHTSCCCC
T ss_pred HHHHHHHHHCCCCc
Confidence 99999999999654
No 41
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.22 E-value=6.6e-06 Score=86.31 Aligned_cols=145 Identities=13% Similarity=0.102 Sum_probs=84.2
Q ss_pred HHHHHHHHhhCCCcEEEecC-CCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCC-cchHHHHHHHHhCCeeeeecc
Q 005411 216 FISSLEVAQFLDLPLQIHTG-FGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDFG 293 (698)
Q Consensus 216 ~~~~~e~a~e~glpvq~H~G-~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~-p~~~e~~~la~~~pnVy~d~s 293 (698)
+...+++|.++|+||.+|++ .+.. .+..+ +++++...|..++++.|+.. .-...+..++.. .+|++++
T Consensus 153 ~~~~~~lA~~~~~pv~iH~~~~~~~-------~~~~~-~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~--G~~i~~~ 222 (314)
T 2vc7_A 153 IRAAAIANKETKVPIITHSNAHNNT-------GLEQQ-RILTEEGVDPGKILIGHLGDTDNIDYIKKIADK--GSFIGLD 222 (314)
T ss_dssp HHHHHHHHHHHCCCEEEECCTTTTH-------HHHHH-HHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHT--TCEEEEC
T ss_pred HHHHHHHHHHHCCEEEEeCCCcccC-------hHHHH-HHHHHcCCCcccEEEECCCCCCCHHHHHHHHHc--CCEEEEe
Confidence 44457889999999999998 3221 12223 45554356778999999954 223445555554 3554444
Q ss_pred c--ccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccc----hhhhH---------HHHHHHHHHHHHhhhhcCCCC
Q 005411 294 L--AIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET----YFLGA---------KRAREVVFSVLRDTCIDEDLS 358 (698)
Q Consensus 294 ~--~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~----~~~~~---------~~~R~~l~~vl~~~v~~g~l~ 358 (698)
. +..+.+.....+.+.++++.++.+|++++||++..|.+ .++.. .+.++.+ .. ++...++
T Consensus 223 ~~~~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~----~~-l~~~g~~ 297 (314)
T 2vc7_A 223 RYGLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTI----PF-LKRNGVN 297 (314)
T ss_dssp CTTCTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTHH----HH-HHHTTCC
T ss_pred CCCcccCCCHHHHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHHHHHHHHH----HH-HHHcCCC
Confidence 3 32122223345567777777778999999997533300 01110 0111222 21 2222355
Q ss_pred hhHHHHHHHHHHHHHHHHHhc
Q 005411 359 VGEAIEVAKDIFALNAAQFYK 379 (698)
Q Consensus 359 ~~ea~~~~~~Il~~NA~rly~ 379 (698)
. +.+.+|+++|++|+|+
T Consensus 298 ~----e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 298 E----EVIATIFKENPKKFFS 314 (314)
T ss_dssp H----HHHHHHHTHHHHHHTC
T ss_pred H----HHHHHHHHHCHHHHhC
Confidence 4 5699999999999985
No 42
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.10 E-value=1.2e-05 Score=85.38 Aligned_cols=146 Identities=16% Similarity=0.141 Sum_probs=86.9
Q ss_pred HHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCC-CcchHHHHHHHHhCCeeeeecccccCc
Q 005411 220 LEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGLAIPK 298 (698)
Q Consensus 220 ~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g-~p~~~e~~~la~~~pnVy~d~s~~~~~ 298 (698)
++++.+.|+||.+|++.|.. + ...+ +++++...|..++++.||. .+-...+..++. -.+|++++++..+
T Consensus 174 ~~~A~~~glPViiH~r~g~~------a-~~~l-~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~--~G~~i~~~g~~t~ 243 (330)
T 3pnz_A 174 ARAHHETKAPIHSHTEAGTM------A-LEQI-EILKQENIPLEYLSIGHMDRNLDPYYHKQVAK--TGAFMSFDGIAKI 243 (330)
T ss_dssp HHHHHHHCCCEEEECGGGCC------H-HHHH-HHHHHTTCCGGGEEETTGGGSCCHHHHHHHHT--TTCEEEECCTTCT
T ss_pred HHHHHHHCCeEEEeCCCCcC------h-HHHH-HHHHHcCCCCCeEEEecCCCCCCHHHHHHHHH--cCcEEEEccCccc
Confidence 67788999999999986421 1 1123 3555435666789999994 222333444443 2689999876421
Q ss_pred c-cHHH-HHHHHHHHHhhCCCCcEEEecCCCCCccc-hhh--h---HHHHHHHHHHHHHhhhhcCCCChhHHHHH-HHHH
Q 005411 299 L-SVQG-MISSIKELLELAPTKKVMFSTDAYASPET-YFL--G---AKRAREVVFSVLRDTCIDEDLSVGEAIEV-AKDI 369 (698)
Q Consensus 299 ~-~~~g-~~~~l~~~le~~~~~kilfgSD~~~~P~~-~~~--~---~~~~R~~l~~vl~~~v~~g~l~~~ea~~~-~~~I 369 (698)
. .++. -.+.++++++.++.+||+++||++. +.. .+. + .......+. .|.+.++...++. +. +.++
T Consensus 244 ~~~~~~~~~~~l~~lv~~g~~drilleTD~p~-~~~~~~~G~~~~~~~~~~~~~~-~l~~~a~~~Gis~----ee~i~~~ 317 (330)
T 3pnz_A 244 KYAPESARIAAILYLVSEGFEDQILVSGDTAR-KTYYKHYGHGPGLEYIAKKWVP-RFIDEANEKGFDG----EKLVKKF 317 (330)
T ss_dssp TTCCHHHHHHHHHHHHHTTCGGGEEECCCCCS-GGGSHHHHCCSTTTHHHHTHHH-HHHHHHHHTTSCH----HHHHHHH
T ss_pred CCCChHHHHHHHHHHHHcCCCCeEEEeCCCCC-CCCCCccCCCCCcchHHHHHHH-HHHHHHHHcCCCH----HHHHHHH
Confidence 1 1111 2346888899999999999999762 210 000 0 001111111 1111123445554 54 9999
Q ss_pred HHHHHHHHhcCC
Q 005411 370 FALNAAQFYKIN 381 (698)
Q Consensus 370 l~~NA~rly~l~ 381 (698)
+.+|++|+|+++
T Consensus 318 t~~Np~rlf~l~ 329 (330)
T 3pnz_A 318 FVDNPARCFTFK 329 (330)
T ss_dssp HTHHHHHHSSCC
T ss_pred HHHhHHHHhcCC
Confidence 999999999985
No 43
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.03 E-value=3.2e-05 Score=83.22 Aligned_cols=149 Identities=15% Similarity=0.169 Sum_probs=88.0
Q ss_pred HHHHHhhCCCcEEEec-CCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCC-c-chHHHHHHHHhCCeeeeecccc
Q 005411 219 SLEVAQFLDLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-P-FSKEASYLAYVYPQVYLDFGLA 295 (698)
Q Consensus 219 ~~e~a~e~glpvq~H~-G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~-p-~~~e~~~la~~~pnVy~d~s~~ 295 (698)
.++++.+.|+||.+|+ |.|+. ...+-.++++...|..++++.|+.. . -...+..++.. .+|+++++.
T Consensus 195 q~~~A~~~glPV~iH~~gr~~a--------~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~--G~~I~f~g~ 264 (364)
T 3k2g_A 195 AARAQVRTGLPLMVHLPGWFRL--------AHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQR--GAFLEFDMI 264 (364)
T ss_dssp HHHHHHHHCCCEEEECCTTSCC--------HHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHH--TCEEEECCT
T ss_pred HHHHHHHHCCeEEEecCCCCcc--------HHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhC--CcEEEecCC
Confidence 3677889999999998 44432 2223335554456667899999942 2 23344444433 688877764
Q ss_pred -----cCcc-----cHHHHHHHHHHHHhhCCCCcEEEecCCCCCccch-hhhHHHHHHHHHHHHHhhhhcCCCChhHHHH
Q 005411 296 -----IPKL-----SVQGMISSIKELLELAPTKKVMFSTDAYASPETY-FLGAKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (698)
Q Consensus 296 -----~~~~-----~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~-~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~ 364 (698)
|+.. +...-.+.++++++.++.+||+.+||++..|... +.+..+ ...+..+.. .++...++. +
T Consensus 265 gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~~-~~l~~~~~~-~l~~~Gis~----e 338 (364)
T 3k2g_A 265 GMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVFVKMMLTRYGGNGY-AFVTKHFLP-RLRRHGLDD----A 338 (364)
T ss_dssp TCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTT-SHHHHHHHH-HHHHTTCCH----H
T ss_pred cccccccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCCc-chHHHHHHH-HHHHcCCCH----H
Confidence 2210 0011234789999999999999999986433111 111000 011111111 122234654 5
Q ss_pred HHHHHHHHHHHHHhcCCCC
Q 005411 365 VAKDIFALNAAQFYKINLG 383 (698)
Q Consensus 365 ~~~~Il~~NA~rly~l~~~ 383 (698)
.+.+++.+|++|+|++..+
T Consensus 339 ei~~~~~~Np~rlf~l~~~ 357 (364)
T 3k2g_A 339 ALETLMVTNPRRVFDASIE 357 (364)
T ss_dssp HHHHHHTHHHHHHHCTTSC
T ss_pred HHHHHHHHHHHHHhCCCcc
Confidence 6999999999999999755
No 44
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.03 E-value=1e-05 Score=82.64 Aligned_cols=145 Identities=14% Similarity=0.029 Sum_probs=84.7
Q ss_pred hhhHHHHHHHHHHhhCCCcEE-EecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeee
Q 005411 211 LIDYIFISSLEVAQFLDLPLQ-IHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (698)
Q Consensus 211 l~d~~~~~~~e~a~e~glpvq-~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy 289 (698)
.....|...+++|.++++||. +|+... ...+-++++ ++|...-+++|+-..-..++..+.. -++|
T Consensus 101 ~Q~~~F~~ql~lA~e~~lPviSiH~r~a----------~~~~~~il~--~~~~~~~~v~H~fsG~~e~a~~~l~--~G~y 166 (254)
T 3gg7_A 101 QQFAVFQHILRRCEDHGGRILSIHSRRA----------ESEVLNCLE--ANPRSGTPILHWYSGSVTELRRAIS--LGCW 166 (254)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTTC----------HHHHHHHHH--HCGGGEEEEEETCCSCHHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEcCCc----------HHHHHHHHH--HcCCCCcEEEEeCCCCHHHHHHHHc--CCcE
Confidence 334455566899999999999 999642 123445666 4664322344872212233333332 3799
Q ss_pred eecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchh-hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHH
Q 005411 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF-LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKD 368 (698)
Q Consensus 290 ~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~-~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~ 368 (698)
++++.++.. ...+++++...|.+|+|+.||+++.|.--- ....+...+. +.+++. ..++. +.+.+
T Consensus 167 is~~g~~~~------~~~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~-~~iA~~---~g~~~----ee~~~ 232 (254)
T 3gg7_A 167 FSVGPTMVR------TQKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVV-EGLSKI---WQIPA----SEVER 232 (254)
T ss_dssp EEECHHHHT------SHHHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHH-HHHHHH---HTSCH----HHHHH
T ss_pred EEECcccCc------hHHHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHH-HHHHHH---hCcCH----HHHHH
Confidence 998876531 135778888999999999999765431000 0001122221 222221 23454 56889
Q ss_pred HHHHHHHHHhcCCCC
Q 005411 369 IFALNAAQFYKINLG 383 (698)
Q Consensus 369 Il~~NA~rly~l~~~ 383 (698)
+.++|++++|+++.+
T Consensus 233 ~~~~N~~~lf~~~~~ 247 (254)
T 3gg7_A 233 IVKENVSRLLGTVRE 247 (254)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHCCCcc
Confidence 999999999998643
No 45
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.01 E-value=2.8e-05 Score=82.93 Aligned_cols=145 Identities=14% Similarity=0.121 Sum_probs=87.5
Q ss_pred HHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCC-CcchHHHHHHHHhCCeeeeecccccC-
Q 005411 220 LEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGLAIP- 297 (698)
Q Consensus 220 ~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g-~p~~~e~~~la~~~pnVy~d~s~~~~- 297 (698)
++++.++|+||.+|+|.|.. + .. .-+++++...|..++++.|+. ..-..++..++. -..|++++.+..
T Consensus 179 ~~lA~~~glPViiH~~~gr~------a-~~-~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~--~G~~i~~~g~~t~ 248 (339)
T 3gtx_A 179 ARVQRETGVPIITHTQEGQQ------G-PQ-QAELLTSLGADPARIMIGHMDGNTDPAYHRETLR--HGVSIAFDRIGLQ 248 (339)
T ss_dssp HHHHHHHCCCEEEECSTTCC------H-HH-HHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHT--TTCEEEECCTTCC
T ss_pred HHHHHHHCCeEEEeCCCCcC------H-HH-HHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHH--cCcEEEEccCccc
Confidence 57788999999999987621 1 11 234666545677889999994 233344444443 268888877531
Q ss_pred -cc--cHH-HHHHHHHHHHhhCCCCcEEEecCCCCC----ccchhhhHHHHH------HHHHHHHHhhhhcCCCChhHHH
Q 005411 298 -KL--SVQ-GMISSIKELLELAPTKKVMFSTDAYAS----PETYFLGAKRAR------EVVFSVLRDTCIDEDLSVGEAI 363 (698)
Q Consensus 298 -~~--~~~-g~~~~l~~~le~~~~~kilfgSD~~~~----P~~~~~~~~~~R------~~l~~vl~~~v~~g~l~~~ea~ 363 (698)
+. +.. .-.+.++++++.++.+||+++||++.. |.. .+.....+ ..+..++...++...++.
T Consensus 249 ~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~~-~p~~~~~~~g~n~p~~l~~~~~~~~~~~Gis~---- 323 (339)
T 3gtx_A 249 GMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPPA-IPEAALPAVKDWHPLHISDDILPDLRRRGITE---- 323 (339)
T ss_dssp SSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCC-CCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCH----
T ss_pred cccCCCchHHHHHHHHHHHHhcCCCeEEEecCCCccccCCccc-ccccccccCCCCCchhHHHHHHHHHHHcCCCH----
Confidence 10 011 123478899999999999999998742 100 00010000 012222333333445664
Q ss_pred HHHHHHHHHHHHHHhc
Q 005411 364 EVAKDIFALNAAQFYK 379 (698)
Q Consensus 364 ~~~~~Il~~NA~rly~ 379 (698)
+.+.+++.+|++|+|+
T Consensus 324 e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 324 EQVGQMTVGNPARLFG 339 (339)
T ss_dssp HHHHHHHTHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 5699999999999985
No 46
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=97.93 E-value=5.2e-05 Score=80.53 Aligned_cols=145 Identities=17% Similarity=0.105 Sum_probs=85.9
Q ss_pred HHHHHhhCCCcEEEecCC-CCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCC-cchHHHHHHHHhCCeeeeecc--c
Q 005411 219 SLEVAQFLDLPLQIHTGF-GDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDFG--L 294 (698)
Q Consensus 219 ~~e~a~e~glpvq~H~G~-G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~-p~~~e~~~la~~~pnVy~d~s--~ 294 (698)
.+++|.++|+||.+|+|. |.. +. ..+ .++++...+..++++.||.. .-...+..++. -.+|++++ +
T Consensus 153 q~~lA~~~glPv~iH~~~~~r~------a~-e~l-~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~--~G~~i~~~~~G 222 (330)
T 2ob3_A 153 AARASLATGVPVTTHTAASQRD------GE-QQA-AIFESEGLSPSRVCIGHSDDTDDLSYLTALAA--RGYLIGLDHIP 222 (330)
T ss_dssp HHHHHHHHCCCEEEECCGGGTH------HH-HHH-HHHHHTTCCGGGEEECSGGGCCCHHHHHHHHH--TTCEEEECCTT
T ss_pred HHHHHHHhCCeEEEECCCCCCC------HH-HHH-HHHHHcCcCcccEEEeCCCCCCCHHHHHHHHh--CCCEEEeCCCc
Confidence 367888999999999972 210 11 123 35554344556889999832 22233333443 27898888 4
Q ss_pred ccCc--------------ccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchh---hhHH-------HHHHHHHHHHHh
Q 005411 295 AIPK--------------LSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF---LGAK-------RAREVVFSVLRD 350 (698)
Q Consensus 295 ~~~~--------------~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~---~~~~-------~~R~~l~~vl~~ 350 (698)
+..+ .+...-.+.++++++.++.+|||.+||++.++. .+ .+.. .+-..+..++.+
T Consensus 223 ~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~l~-~~~~~~g~~~~~n~pn~~~~~~~~~ia~ 301 (330)
T 2ob3_A 223 YSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFGFS-SYVTNIMDVMDRVNPDGMAFIPLRVIPF 301 (330)
T ss_dssp CCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEEC-SSSTTHHHHHHHHCTTGGGHHHHTHHHH
T ss_pred cccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCcc-cccccCCCcccccCCCCcchHHHHHHHH
Confidence 4332 111111246889999999999999999764111 01 0111 111123344444
Q ss_pred hhhcCCCChhHHHHHHHHHHHHHHHHHhc
Q 005411 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (698)
Q Consensus 351 ~v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (698)
+.+.| ++. +.+.++...|++|+|+
T Consensus 302 l~~~G-~~~----eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 302 LREKG-VPQ----ETLAGITVTNPARFLS 325 (330)
T ss_dssp HHHTT-CCH----HHHHHHHTHHHHHHHS
T ss_pred HHHcC-CCH----HHHHHHHHHHHHHHhc
Confidence 44433 665 5588999999999998
No 47
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.88 E-value=7.4e-05 Score=80.38 Aligned_cols=150 Identities=15% Similarity=0.137 Sum_probs=88.6
Q ss_pred HHHHHhhC-CCcEEEec-CCCCCCCCCCCCCccchHHHHhhc-CCCCcEEEEecCCC--cchHHHHHHHHhCCeeeeecc
Q 005411 219 SLEVAQFL-DLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDK-RFSKCRFVLLHASY--PFSKEASYLAYVYPQVYLDFG 293 (698)
Q Consensus 219 ~~e~a~e~-glpvq~H~-G~G~~~~~~~~~~p~~L~~l~~~~-~~P~~~~vllH~g~--p~~~e~~~la~~~pnVy~d~s 293 (698)
.++++.++ |+||.+|+ +.|+. ....-.++++. ..|..++++.|+.. .-...+..++.. .+|++++
T Consensus 184 q~~~A~~~~glPV~iH~~r~~~a--------~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~--G~~I~~~ 253 (365)
T 3rhg_A 184 AALAQNNNPYASMNIHMPGWQRR--------GDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLDR--GVWLEFD 253 (365)
T ss_dssp HHHHHTTCTTCEEEEECCTTSCC--------HHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHHT--TCEEEEC
T ss_pred HHHHHHHhcCCcEEEECCCCCcC--------HHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHhC--CCEEEec
Confidence 36788899 99999998 64432 22233455543 45666799999942 223344444432 6888877
Q ss_pred cc-----cCcc----cHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhh-hHHHHHHHHHHHHHhhhhcCCCChhHHH
Q 005411 294 LA-----IPKL----SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFL-GAKRAREVVFSVLRDTCIDEDLSVGEAI 363 (698)
Q Consensus 294 ~~-----~~~~----~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~-~~~~~R~~l~~vl~~~v~~g~l~~~ea~ 363 (698)
+. |+.. +...-.+.++++++.++.+||+++||++..+-..+- +.. ... +...+...++...++.
T Consensus 254 g~g~~~tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~p~l~~~~~~G~~~-~~~-l~~~~~~~~~~~Gis~---- 327 (365)
T 3rhg_A 254 MIGLDISFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDVFLKQMWAKNGGNG-WGF-VPNVFLSLLAQRGIDK---- 327 (365)
T ss_dssp CTTCCCBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCT-TTH-HHHTHHHHHHHTTCCH----
T ss_pred CCCccccccccccccchHHHHHHHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCC-chh-HHHHHHHHHHHcCCCH----
Confidence 64 2110 001123478899999999999999998654321110 000 001 1111112223334665
Q ss_pred HHHHHHHHHHHHHHhcCCCCc
Q 005411 364 EVAKDIFALNAAQFYKINLGV 384 (698)
Q Consensus 364 ~~~~~Il~~NA~rly~l~~~~ 384 (698)
+.+.+++.+|++|+|+++...
T Consensus 328 e~i~~~~~~Np~rlf~l~~~~ 348 (365)
T 3rhg_A 328 TIIDKLCIDNPANLLAAENLY 348 (365)
T ss_dssp HHHHHHTTHHHHHHHHSCCSS
T ss_pred HHHHHHHHHHHHHHHCCCCcc
Confidence 569999999999999996543
No 48
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.83 E-value=0.00014 Score=77.85 Aligned_cols=148 Identities=15% Similarity=0.078 Sum_probs=84.6
Q ss_pred HHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCC-cchHHHHHHHHhCCeeeeecccccC
Q 005411 219 SLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDFGLAIP 297 (698)
Q Consensus 219 ~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~-p~~~e~~~la~~~pnVy~d~s~~~~ 297 (698)
..+++.+.|+||.+|+..+.. .+..++-+.+. ..|--++++.|+++ .-...+..++..--.+.+|.-++..
T Consensus 198 ~a~aa~etG~Pv~iHt~~~~~-------~~e~l~iL~ee-G~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~~~ 269 (360)
T 3tn4_A 198 AARAQKETGAVIITHTQEGTM-------GPEQAAYLLEH-GADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGIQG 269 (360)
T ss_dssp HHHHHHHHCCEEEEECSTTCC-------HHHHHHHHHHT-TCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCC
T ss_pred HHHHHHHhCCcEEEEcCcccC-------CHHHHHHHHHc-CCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEccccccc
Confidence 367788999999999986521 12345444443 55667899999522 2222333455443344444322211
Q ss_pred c--ccHHH-HHHHHHHHHhhCCCCcEEEecCCC----CCccchhhhHHH------HHHHHHHHHHhhhhcCCCChhHHHH
Q 005411 298 K--LSVQG-MISSIKELLELAPTKKVMFSTDAY----ASPETYFLGAKR------AREVVFSVLRDTCIDEDLSVGEAIE 364 (698)
Q Consensus 298 ~--~~~~g-~~~~l~~~le~~~~~kilfgSD~~----~~P~~~~~~~~~------~R~~l~~vl~~~v~~g~l~~~ea~~ 364 (698)
. .+.+. -.+.++++++.++.+|||.+||+. ..|.......+. +-.++.+++..+.+.| ++. +
T Consensus 270 ~~~~p~d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~ip~L~~~G-vs~----e 344 (360)
T 3tn4_A 270 MVGAPTDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPALKNEG-IRD----E 344 (360)
T ss_dssp STTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHHHHHTT-CCH----H
T ss_pred ccCCCChHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCCCCchhHHHHHHHHHHHcC-CCH----H
Confidence 1 11122 234789999999999999999961 112110000110 1123445555554444 443 6
Q ss_pred HHHHHHHHHHHHHhc
Q 005411 365 VAKDIFALNAAQFYK 379 (698)
Q Consensus 365 ~~~~Il~~NA~rly~ 379 (698)
.+++|+.+|++|+|-
T Consensus 345 ~I~~i~~~NP~rlfs 359 (360)
T 3tn4_A 345 VLEQMFIGNPAALFS 359 (360)
T ss_dssp HHHHHHTHHHHHHHC
T ss_pred HHHHHHHHhHHHHhc
Confidence 799999999999983
No 49
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.82 E-value=7.8e-06 Score=83.97 Aligned_cols=138 Identities=19% Similarity=0.240 Sum_probs=76.6
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeeecc-
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFG- 293 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d~s- 293 (698)
.|...+++|.++|+||.+|+..+.. ......+-++++....|..+.++.|++....++ +.. -++|++++
T Consensus 111 ~f~~ql~lA~e~~lPv~iH~r~~~~-----~~a~~~~~~il~~~~~~~~~~vi~H~~~~~a~~---~l~--~G~yis~~~ 180 (261)
T 3guw_A 111 VLKSQLELAKRMDVPCIIHTPRGNK-----LKATRKTLEILESLDFPADLAVIDHVNFETLDM---VLE--TEYWIGLTV 180 (261)
T ss_dssp HHHHHHHHHHHHTCCEEEECCSSST-----THHHHHHHHHHHHTTCCTTSEEEESCCTTTHHH---HHT--SSSEEEEEC
T ss_pred HHHHHHHHHHHhCCeEEEEcCCCcc-----cchHHHHHHHHHHcCCCCCCEEEEeCCHHHHHH---HHh--CCEEEEecC
Confidence 3444578899999999999974310 011223445666434566778889995433322 222 37999988
Q ss_pred --cccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHH
Q 005411 294 --LAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFA 371 (698)
Q Consensus 294 --~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~ 371 (698)
++..+ + ..++++...|.+|+|+.||++.-|.. + .+..+.+ +.+.+. ..+ + + +.++.+
T Consensus 181 ~pg~~t~--~-----~~~~~v~~ipldrlLlETD~P~~pn~--P--~~v~~~~-~~la~~---~g~--~---~-v~~~~~ 239 (261)
T 3guw_A 181 QPGKLSA--E-----DAARIVAEHGPERFMLNSDAGYRDVE--I--TTVAEAA-VKIEEA---VGR--E---E-MEKVAR 239 (261)
T ss_dssp C--------------CCTTGGGGCC-CCEEEECCCCCC----------CCCCT-THHHHH---CTT--G---G-GGHHHH
T ss_pred CCCcccH--H-----HHHHHHHhCCcceEEEecCCCCCCCC--H--HHHHHHH-HHHHhh---CCh--h---H-HHHHHH
Confidence 54321 1 12567788999999999996543311 0 0111111 111110 112 2 2 788999
Q ss_pred HHHHHHhcCCCC
Q 005411 372 LNAAQFYKINLG 383 (698)
Q Consensus 372 ~NA~rly~l~~~ 383 (698)
+||+|+|+++..
T Consensus 240 ~Na~rlf~~~~~ 251 (261)
T 3guw_A 240 ENARKFLRVLEA 251 (261)
T ss_dssp SSHHHHTTC---
T ss_pred HHHHHHHCCCch
Confidence 999999998643
No 50
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=97.33 E-value=0.0024 Score=67.40 Aligned_cols=95 Identities=14% Similarity=0.116 Sum_probs=57.3
Q ss_pred HHHHHHHHhh-CCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeeeccc
Q 005411 216 FISSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGL 294 (698)
Q Consensus 216 ~~~~~e~a~e-~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d~s~ 294 (698)
|...+++|.+ +++||.+|+-.. . ..+-++++....+..+.|+ |+=..-..++..+.. -+.|+++++
T Consensus 156 F~~ql~lA~e~~~lPviiH~r~A---------~-~d~l~iL~~~~~~~~~gVi-H~FsGs~e~a~~~l~--lG~yis~~G 222 (325)
T 3ipw_A 156 YRTLSILHQKYPYLPFFFHCRKS---------W-SDLCQLNKELGYNGCKGVV-HCFDGTEEEMNQILN--EGWDIGVTG 222 (325)
T ss_dssp HHHTHHHHHHCTTCCEEEEEESC---------H-HHHHHHHHHTTCTTSCEEE-CSCCCCHHHHHHHHH--TTCEEEECS
T ss_pred HHHHHHHHHHhhCCeEEEEeCch---------H-HHHHHHHHhcCCCCCcEEE-EECCCCHHHHHHHHh--cCcEEeeCc
Confidence 3344788999 999999999532 1 1233466631222345555 981111223333332 269999988
Q ss_pred ccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCC
Q 005411 295 AIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS 329 (698)
Q Consensus 295 ~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~ 329 (698)
.. +- . .+.+ +++...|.+|+|.-||+++.
T Consensus 223 ~~-~k---~-~~~~-~~v~~iPldrlLlETDaP~l 251 (325)
T 3ipw_A 223 NS-LQ---S-IELL-NVMKQIPIERLHIETDCPYC 251 (325)
T ss_dssp GG-GS---S-HHHH-HHHTTSCGGGEEECCCTTSC
T ss_pred cc-cC---c-HHHH-HHHHhCCcccEEEeCCCccc
Confidence 53 11 1 1223 68889999999999998754
No 51
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=96.96 E-value=0.0041 Score=68.64 Aligned_cols=92 Identities=21% Similarity=0.189 Sum_probs=67.9
Q ss_pred eecCCCCCceEEecCcCc-hHHHHHHHHHHHHHHHHHHHHcCCee---eeccc-----------cC----------CCCC
Q 005411 585 LHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVARKHGLLA---TFVPK-----------FA----------LDDI 639 (698)
Q Consensus 585 ~h~E~gpgQ~Ei~l~p~~-~l~aaD~l~~~r~~ik~vA~~~Gl~A---TFmpK-----------P~----------~~~~ 639 (698)
+..|-+ +|+|++..|.. .-++++++...+..++++|+++|+.. .+.|+ |- .+..
T Consensus 91 i~~E~~-~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l~~~G~~P~~~~~~~~~~~~~RY~~m~~~~~~~g~~ 169 (449)
T 2gwd_A 91 ISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGMGFQPKWRREDIPTMPKGRYDIMRNYMPKVGSL 169 (449)
T ss_dssp EEECTT-CCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEEECCSBCSSCCGGGSCCCSCHHHHHHHHHGGGTCSS
T ss_pred EEecCC-ceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCceeeccCCCCCCccccCCCCchHHHHHHHHHHHhchh
Confidence 666776 99999999976 55789999999999999999999664 23333 21 0222
Q ss_pred -------CcccccccccccCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhhhhcCCC
Q 005411 640 -------GSGSHVHLSLWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (698)
Q Consensus 640 -------GsG~H~H~Sl~~~g~n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~ 694 (698)
-+|+|||+++-+. +.+..-+-.++...|-++|+++.++
T Consensus 170 g~~mm~~~~g~qVhl~~~~~-----------------~~~~~~~~~~~~~~P~llALsAnSP 214 (449)
T 2gwd_A 170 GLDMMLRTCTVQVNLDFSSE-----------------ADMIRKFRAGLALQPIATALFANSP 214 (449)
T ss_dssp HHHHHHHBCEEEEEECCSSH-----------------HHHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHhhcceeeEEEecCCCH-----------------HHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4788999988431 1245566778888999999988765
No 52
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=96.85 E-value=0.01 Score=63.88 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=87.3
Q ss_pred eeeeeeeeEEEEEeecccCCCCCceeCCCCCcccCccccCchHHHHHHHHHHHhCCCce--eeeecCCCCCceEEecCcC
Q 005411 524 VLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISV--EQLHAEAGKGQFEIALGHT 601 (698)
Q Consensus 524 ~~~~g~E~EF~l~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~GI~v--e~~h~E~gpgQ~Ei~l~p~ 601 (698)
...+|+|.|+.++++. +| .+... . .++++. ++=.+ ..+..|..-+|.|++.+|.
T Consensus 11 ~~~~GiE~E~~~Vd~~--~g----~~~~~---------~------~~~l~~---~~~~~~~~~it~E~~~~qlEl~t~p~ 66 (372)
T 1r8g_A 11 PFTLGIELEMQVVNPP--GY----DLSQD---------S------SMLIDA---VKNKITAGEVKHDITESMLELATDVC 66 (372)
T ss_dssp TTCEEEEEEEEEEETT--TT----EECSC---------C------HHHHTT---TSSSCSSSEEEECSSSSEEEEECCSB
T ss_pred CCceEEEEEEeeECCC--CC----CcCcc---------H------HHHHHh---chhcccCCcccchhhccEEEecCCCC
Confidence 4689999999999871 12 12110 0 122222 22111 4688999999999999997
Q ss_pred c-hHHHHHHHHHHHHHHHHHHHHcCCee---eeccc-----------cC------------CCCCCcccccccccccCCc
Q 005411 602 V-AAKAADNLIFTREVLRAVARKHGLLA---TFVPK-----------FA------------LDDIGSGSHVHLSLWQNGE 654 (698)
Q Consensus 602 ~-~l~aaD~l~~~r~~ik~vA~~~Gl~A---TFmpK-----------P~------------~~~~GsG~H~H~Sl~~~g~ 654 (698)
. .-++.+.+-..+..++++|.++|... .+.|+ |. ....-+|+|+|+|+-+.
T Consensus 67 ~~~~e~~~~L~~~~~~~~~~a~~~g~~l~~~g~~P~~~~~~~~i~~~~rY~~l~~~~g~~~~~~~i~g~hvhv~~~~~-- 144 (372)
T 1r8g_A 67 RDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASG-- 144 (372)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGCSCCBCEEEEEEECSSH--
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCEEEecCCCCCCCCccCCCCCchHHHHHHHHHHHHHHhhceeeEEEEeCCCCH--
Confidence 6 56689999999999999999988764 34443 21 11234999999999431
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhhhhcCCC
Q 005411 655 NVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (698)
Q Consensus 655 n~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~ 694 (698)
+..-..+--++.++|-++|+++.++
T Consensus 145 ---------------~~~~~~~~~~~~~~p~l~aL~anSP 169 (372)
T 1r8g_A 145 ---------------DDAIYLLHGLSRFVPHFIALSAASP 169 (372)
T ss_dssp ---------------HHHHHHHHHHHTTHHHHHHHHCCBC
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1234555667777888999888765
No 53
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=96.53 E-value=0.0021 Score=68.41 Aligned_cols=155 Identities=14% Similarity=0.153 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCC----ccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeee
Q 005411 214 YIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSN----PLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (698)
Q Consensus 214 ~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~----p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy 289 (698)
..+.++++.+++.|.||.+|.+..+...+...+. +..+..++. +++++++++.|.+.....+++.-+ ..||+
T Consensus 120 ~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~~la--~~~~~~~hi~Hvst~~~~~~i~~a--k~~Vt 195 (347)
T 2z26_A 120 DAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQ--RLTALKVVFEHITTKDAADYVRDG--NERLA 195 (347)
T ss_dssp GGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHHHHH--HSTTCCEEECSCCSHHHHHHHHTS--CTTEE
T ss_pred HHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHHHHH--hhcCCcEEEEECCcHHHHHHHHHh--CCCce
Confidence 3455668888899999999998653111100000 011221344 589999999998754333322222 26899
Q ss_pred eecccccCcccH--------------------HHHHHHHHHHHhhCCCCcE--EEecCCCCCccch------hhhHHHHH
Q 005411 290 LDFGLAIPKLSV--------------------QGMISSIKELLELAPTKKV--MFSTDAYASPETY------FLGAKRAR 341 (698)
Q Consensus 290 ~d~s~~~~~~~~--------------------~g~~~~l~~~le~~~~~ki--lfgSD~~~~P~~~------~~~~~~~R 341 (698)
++++.....++. ..-+..|.+.+. -++| +++||.-++..-. ..+..-..
T Consensus 196 ~e~~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~---~G~id~~i~SDhaP~~~~~K~~~~g~~Gi~~~e 272 (347)
T 2z26_A 196 ATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVA---SGFNRVFLGTDSAPHARHRKESSCGCAGCFNAP 272 (347)
T ss_dssp EEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHH---TTCTTEEECCCBCCCCHHHHSSSSBCCCCCCTT
T ss_pred EeecchHheecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHh---cCCCCeEEecCCCCCCHHHhcCCCCCCCcCcHH
Confidence 998754321111 111223333333 3455 7999953332100 00000000
Q ss_pred HHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005411 342 EVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 342 ~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
..+.-++ ..+ ++.+++++ +.+++..|++|+|+|.
T Consensus 273 ~~l~l~~-~~~-~~~~sl~~----~v~~~s~nPAki~gl~ 306 (347)
T 2z26_A 273 TALGSYA-TVF-EEMNALQH----FEAFCSVNGPQFYGLP 306 (347)
T ss_dssp THHHHHH-HHH-HHTTCGGG----HHHHHHTHHHHHHTCC
T ss_pred HHHHHHH-HHh-hcCCCHHH----HHHHHhHhHHHHhCCC
Confidence 1111111 223 24567754 7778889999999994
No 54
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=95.83 E-value=0.03 Score=58.92 Aligned_cols=69 Identities=9% Similarity=0.121 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCC---------------------------CCccchhhhHHHHHHHHHHHHHhhhh
Q 005411 301 VQGMISSIKELLELAPTKKVMFSTDAY---------------------------ASPETYFLGAKRAREVVFSVLRDTCI 353 (698)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~---------------------------~~P~~~~~~~~~~R~~l~~vl~~~v~ 353 (698)
.+.+.+.+..+.+.+|.++|.+|||.. ..|.. +.....+ -++..++.+
T Consensus 225 ~~~~~~hi~~i~~~~G~dhVgiGsDf~~~~~~~~~~~~~~~dg~~~~~~~~G~~~~~~g-l~~~~~~----~~l~~~L~~ 299 (325)
T 2i5g_A 225 IDDYAEAIEYVMNIVGEDAIGIGTDFTQGHGHDFFEWLTHDKGYARRLTNFGKIVNPLG-IRTVGEF----PNLTETLLK 299 (325)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEECCCBCTTCCHHHHHHHHBGGGTSSBCCCCCSCCCCBT-CSSGGGT----HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEECCcCcccccccchhhhcccccccccccccCCCCCccc-CCCHHHH----HHHHHHHHH
Confidence 456677888899999999999999941 01110 0011122 233444444
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHHhc
Q 005411 354 DEDLSVGEAIEVAKDIFALNAAQFYK 379 (698)
Q Consensus 354 ~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (698)
.| ++. +.+++|+++|+.|+|+
T Consensus 300 ~G-~se----~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 300 RG-MPE----RVVRKVMGENWVRVLR 320 (325)
T ss_dssp TT-CCH----HHHHHHHTHHHHHHHH
T ss_pred cC-CCH----HHHHHHHHHHHHHHHH
Confidence 44 554 5699999999999985
No 55
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=95.79 E-value=0.11 Score=55.91 Aligned_cols=57 Identities=14% Similarity=0.182 Sum_probs=37.2
Q ss_pred EEecCCCcchHHHHHHHHhCCeeeeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCC
Q 005411 266 VLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYA 328 (698)
Q Consensus 266 vllH~g~p~~~e~~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~ 328 (698)
+++|+=..-..++-.+...-+|+|+.+++.. +- . .+ ..+++...|.+|||.-||+++
T Consensus 250 ~V~H~FsGs~e~a~~~l~lG~~~yis~~g~~-~k---~-~~-~~e~v~~iPldrLLlETDaP~ 306 (401)
T 3e2v_A 250 LVVHSFTGSAIDLQKLLNLSPNIFIGVNGCS-LR---T-EE-NLAVVKQIPTERLLLETDAPW 306 (401)
T ss_dssp EEECSCCCCHHHHHHHHHHCTTEEEEECGGG-GS---S-HH-HHHHHHTSCGGGEEECCCTTS
T ss_pred EEEEcCCCCHHHHHHHHhCCCCEEEEeCCEe-cC---C-HH-HHHHHHhCCchhEEEecCCCC
Confidence 4569811122344445545588999999863 21 1 12 237788899999999999874
No 56
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=92.60 E-value=0.22 Score=52.97 Aligned_cols=70 Identities=7% Similarity=0.055 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCC--CccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005411 301 VQGMISSIKELLELAPTKKVMFSTDAYA--SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (698)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~--~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (698)
.+.+.+.+..+.+++|.+.|-+|||.-. .|... ..... +-++..++.+.| ++. +.+++|+++|..|++
T Consensus 282 l~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~~p~gl-~d~s~----~p~L~~~L~~rG-~se----~~i~ki~g~N~lRvl 351 (364)
T 3ly0_A 282 WEPVLRHLDHLIDRLGEDHVGMGSDFDGATIPQGI-ADVTG----LPALQAAMRAHG-YDE----PLMRKLCHENWYGLL 351 (364)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEECCCBTTSCCCTTT-CSGGG----HHHHHHHHHHHT-CCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCC-CCHHH----HHHHHHHHHHCC-CCH----HHHHHHHhHhHHHHH
Confidence 4567778899999999999999999322 22210 11111 223444444554 554 569999999999999
Q ss_pred cC
Q 005411 379 KI 380 (698)
Q Consensus 379 ~l 380 (698)
+-
T Consensus 352 ~~ 353 (364)
T 3ly0_A 352 ER 353 (364)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 57
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=91.08 E-value=3.9 Score=42.90 Aligned_cols=144 Identities=15% Similarity=0.062 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCC---cchHHHHHHHHhCCee
Q 005411 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY---PFSKEASYLAYVYPQV 288 (698)
Q Consensus 212 ~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~---p~~~e~~~la~~~pnV 288 (698)
.+..+..+++.|.++|+|+.+|++... ........+....+.+ .+ .+.|+.. +...+....+... ++
T Consensus 172 ~~~~l~~~~~~a~~~g~~v~~H~~~~~----~~~~~~~~i~~~~~~G----~~-~i~H~~~~~~~~~~~~~~~~~~~-g~ 241 (386)
T 2vun_A 172 NPEDAAPMVEWAHKHGFKVQMHTGGTS----IPGSSTVTADDVIKTK----PD-VVSHINGGPTAISVQEVDRIMDE-TD 241 (386)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEECSCCS----CSTTCSCCHHHHHHHC----CS-EEETTTCSSSCCCHHHHHHHHHH-CC
T ss_pred CHHHHHHHHHHHHHCCCeEEEecCCcc----ccccCHHHHHHHHHcC----CC-EEEEccCCCCCCCHHHHHHHHHc-CC
Confidence 344566778999999999999997321 0111222345555531 22 3789755 1333333333222 44
Q ss_pred ee-ecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCC-CCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHH
Q 005411 289 YL-DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAY-ASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVA 366 (698)
Q Consensus 289 y~-d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~-~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~ 366 (698)
++ .+.. .+. .......++++++.+..++++++||++ .++.. ..+. .. ..+. .+++ ..++..+ +
T Consensus 242 ~vl~~~~-~g~--~~~~~~~~~~~~~~g~~d~v~lgTD~p~~~~~~-~~g~-~~-~~~~----~~~~-~~ls~~~----~ 306 (386)
T 2vun_A 242 FAMEIVQ-CGN--PKIADYVARRAAEKGQLGRVIFGNDAPSGTGLI-PLGI-LR-NMCQ----IASM-SDIDPEV----A 306 (386)
T ss_dssp CEEEEES-SSC--HHHHHHHHHHHHHHTCGGGEEEECCBSBTTBBC-TTHH-HH-HHHH----HHHH-SCCCHHH----H
T ss_pred eEEEecc-CCc--ccccHHHHHHHHHcCCCceeEEecCCCCCCCCC-cchh-HH-HHHH----HHhh-cCCCHHH----H
Confidence 44 1100 000 112234678888888888999999963 21111 1111 11 1121 1222 4577644 6
Q ss_pred HHHHHHHHHHHhcC
Q 005411 367 KDIFALNAAQFYKI 380 (698)
Q Consensus 367 ~~Il~~NA~rly~l 380 (698)
-+++..|++++|++
T Consensus 307 ~~~~T~n~A~~lgl 320 (386)
T 2vun_A 307 VCMATGNSTAVYGL 320 (386)
T ss_dssp HHHHTHHHHHHHTC
T ss_pred HHHHhHHHHHHcCC
Confidence 66778899999998
No 58
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=90.83 E-value=1.4 Score=46.87 Aligned_cols=76 Identities=18% Similarity=0.226 Sum_probs=49.1
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchH---HHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCee
Q 005411 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLR---AILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (698)
Q Consensus 212 ~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~---~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnV 288 (698)
++-.+..+++.+++.|.|+.+|.-..+. ...+.-..+. .+++ ++|+.++++.|.+.. +...+.+...+|
T Consensus 134 ~~~~l~~~l~~~~~~g~~v~vHaEd~~~---i~~~E~~ai~r~~~la~--~~~g~~lhi~HvSt~---~~v~~I~~A~~V 205 (359)
T 3pnu_A 134 DIEYLKPTLEAMSDLNIPLLVHGETNDF---VMDRESNFAKIYEKLAK--HFPRLKIVMEHITTK---TLCELLKDYENL 205 (359)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCCSSC---GGGTTGGGHHHHHHHHH--HCTTSCEEECSCCSH---HHHHHHHHCTTE
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCchH---hHHHHHHHHHHHHHHHH--HcCCCcEEEEecCcH---HHHHHHHhcCCc
Confidence 4456677788999999999999975421 1111222233 3444 599999999999753 333333332788
Q ss_pred eeecccc
Q 005411 289 YLDFGLA 295 (698)
Q Consensus 289 y~d~s~~ 295 (698)
+.+++..
T Consensus 206 taEv~ph 212 (359)
T 3pnu_A 206 YATITLH 212 (359)
T ss_dssp EEEECSG
T ss_pred eEEEech
Confidence 8888753
No 59
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=90.34 E-value=0.43 Score=51.79 Aligned_cols=70 Identities=10% Similarity=0.065 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCCC--ccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005411 301 VQGMISSIKELLELAPTKKVMFSTDAYAS--PETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (698)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~--P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (698)
...+.+.+..+.+.+|.+.|-+|||.-.. |.. +.....+ -+++.++++.| ++. +.+++|+++|..|++
T Consensus 335 l~~~~~Hidhi~~~~G~dhVGiGsDfDG~~~~~g-l~dvs~~----p~l~~~L~~rG-~se----~di~ki~ggN~lRVl 404 (417)
T 3b40_A 335 LKELVDAIDYTVKKVGIDHVGISSDFNDGGGVDG-WKDVSEI----RNVTAELITRG-YSD----ADIAKLWGGNFLRAW 404 (417)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEECCBTTTCCBBT-BCSGGGH----HHHHHHHHHHT-CCH----HHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEcCCCCCCCCCCC-CCCHHHH----HHHHHHHHhcC-CCH----HHHHHHHHHHHHHHH
Confidence 44566788888999999999999994321 211 1111112 23444555555 454 569999999999998
Q ss_pred cC
Q 005411 379 KI 380 (698)
Q Consensus 379 ~l 380 (698)
+-
T Consensus 405 ~~ 406 (417)
T 3b40_A 405 GE 406 (417)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 60
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=89.06 E-value=1.2 Score=47.46 Aligned_cols=70 Identities=14% Similarity=0.184 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCCC---ccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHH
Q 005411 301 VQGMISSIKELLELAPTKKVMFSTDAYAS---PETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (698)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~---P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rl 377 (698)
.+.+.+.+..+.+.+|.+.|-+|||.-.. |.. +-....+ -++..++.+.| ++. +.+++|+++|+.|+
T Consensus 264 ~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~g-l~d~~~~----p~l~~~L~~~G-~se----~~i~ki~g~N~lRv 333 (369)
T 1itu_A 264 LSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEG-LEDVSKY----PDLIAELLRRN-WTE----AEVKGALADNLLRV 333 (369)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBT-CSSTTCH----HHHHHHHHHTT-CCH----HHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCC-CCCHHHH----HHHHHHHHHcC-CCH----HHHHHHHhHhHHHH
Confidence 45667788888999999999999995332 321 0111112 23334444444 554 56999999999999
Q ss_pred hcC
Q 005411 378 YKI 380 (698)
Q Consensus 378 y~l 380 (698)
++-
T Consensus 334 l~~ 336 (369)
T 1itu_A 334 FEA 336 (369)
T ss_dssp HHH
T ss_pred HHH
Confidence 974
No 61
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=89.04 E-value=0.89 Score=48.92 Aligned_cols=71 Identities=11% Similarity=0.037 Sum_probs=47.4
Q ss_pred cHHHHHHHHHHHHhhCCCCcEEEecCCCC---CccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHH
Q 005411 300 SVQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (698)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~---~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (698)
+...+.+.+..+.+++|.+.|-+|||.-. .|...-...+ +-+++.++.+.| ++. +.+++|+++|..|
T Consensus 295 tl~dv~~HIdhi~~l~G~dhVgiGsDfDG~~~~P~gl~dvs~-----~p~L~~~L~~rG-~se----~di~ki~g~N~lR 364 (400)
T 3id7_A 295 TVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSG-----YPNLIAELLDRG-WSQ----SDLAKLTWKNAVR 364 (400)
T ss_dssp BHHHHHHHHHHHHHHHCGGGEEECCCBTTCSCCCBTCSSTTC-----HHHHHHHHHHTT-CCH----HHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEECCCCCCCCCCCCCCCCHHH-----HHHHHHHHhhcC-CCH----HHHHHHHHHhHHH
Confidence 34567778899999999999999999433 2321111111 223344555554 554 5699999999999
Q ss_pred HhcC
Q 005411 377 FYKI 380 (698)
Q Consensus 377 ly~l 380 (698)
+++-
T Consensus 365 vl~~ 368 (400)
T 3id7_A 365 VLDA 368 (400)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9974
No 62
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=88.14 E-value=0.78 Score=49.74 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCCC--ccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHh
Q 005411 301 VQGMISSIKELLELAPTKKVMFSTDAYAS--PETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (698)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~--P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly 378 (698)
.+.+.+.+..+.+.+|.+.|-+|||.-.. |.. +..... +-+++.++++.| ++. +.+++|+++|..|++
T Consensus 336 l~~~~~Hidhi~~~~G~dhVgiGsDfDG~~~~~g-l~dvs~----~p~L~~~Ll~rG-~se----~di~ki~g~N~lRvl 405 (417)
T 2rag_A 336 FDLYMKSMLHVLKVAGPKGVCVGADWDGGGGMDG-FEDITD----LPKITARLKAEG-YSD----ADIEAIWSGNVLRIV 405 (417)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEECCCTTTTCCBBT-BSSGGG----THHHHHHHHHTT-CCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEEccCCCCCCCCCC-CCCHHH----HHHHHHHHHHcC-CCH----HHHHHHHHHHHHHHH
Confidence 44567788888999999999999994332 211 111111 223444555555 554 569999999999998
Q ss_pred c
Q 005411 379 K 379 (698)
Q Consensus 379 ~ 379 (698)
+
T Consensus 406 ~ 406 (417)
T 2rag_A 406 D 406 (417)
T ss_dssp H
T ss_pred H
Confidence 6
No 63
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=87.23 E-value=3.9 Score=42.57 Aligned_cols=71 Identities=17% Similarity=0.088 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHHHhhCCCCcEEEecCCCCC---ccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHH
Q 005411 300 SVQGMISSIKELLELAPTKKVMFSTDAYAS---PETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (698)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~~---P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (698)
+.+.+.+.+..+.+++|.+.|-+|||.-.. |...-..++ +-++..++.+ | ++. +.+++|+++|+.|
T Consensus 238 tl~~~~~Hi~hi~~l~G~dhVgiGsDfDG~~~~p~gl~d~s~-----~p~L~~~L~~-g-~se----~~i~ki~g~N~lR 306 (318)
T 3neh_A 238 DTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVGK-----YQSFLETLEK-H-YTK----EEIEGFASRNFLN 306 (318)
T ss_dssp BHHHHHHHHHHHHHTTCGGGEEECCCBTSCSSCBBTBSSGGG-----HHHHHHHHTT-T-SCH----HHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCCCCCHHH-----HHHHHHHHHh-c-CCH----HHHHHHHhHhHHH
Confidence 345677889999999999999999995332 221101122 2344555555 4 664 5699999999999
Q ss_pred HhcCC
Q 005411 377 FYKIN 381 (698)
Q Consensus 377 ly~l~ 381 (698)
+++-+
T Consensus 307 v~~~~ 311 (318)
T 3neh_A 307 HLPKE 311 (318)
T ss_dssp TCCC-
T ss_pred HHhhh
Confidence 98743
No 64
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=85.71 E-value=17 Score=37.98 Aligned_cols=139 Identities=16% Similarity=0.088 Sum_probs=73.8
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeee
Q 005411 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (698)
Q Consensus 211 l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~ 290 (698)
+.+-.+..+++.|.++|+++.+|.... ..+...++. ..+ .+.|+.+-...++..++.. ++++
T Consensus 204 ~~~e~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~~~~~--g~~---~i~H~~~~~~~~~~~~~~~--g~~~ 265 (403)
T 3gnh_A 204 LTYEEMKAVVDEAHMAGIKVAAHAHGA-----------SGIREAVRA--GVD---TIEHASLVDDEGIKLAVQK--GAYF 265 (403)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECSH-----------HHHHHHHHT--TCS---EEEECTTCCHHHHHHHHHH--TCEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHh--CCC---EEecCCcCCHHHHHHHHHC--CCEE
Confidence 334445566888999999999998421 124455552 222 4668754333333344432 4555
Q ss_pred ecccccCc----------ccHH------H----HHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHh
Q 005411 291 DFGLAIPK----------LSVQ------G----MISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRD 350 (698)
Q Consensus 291 d~s~~~~~----------~~~~------g----~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~ 350 (698)
........ .+.. + ....++.+++.+. ++.+|||+...|.... .+.++ .
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~~--~~e~~-----~--- 333 (403)
T 3gnh_A 266 SMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALKAGV--KMVYGTDAGIYPHGDN--AKQFA-----V--- 333 (403)
T ss_dssp ECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--EEECCCCBTTBCTTCG--GGHHH-----H---
T ss_pred EeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--eEEEecCCCCCCCCch--HHHHH-----H---
Confidence 54321100 0000 0 1123556666543 8999999765553221 11121 1
Q ss_pred hhhcCCCChhHHHHHHHHHHHHHHHHHhcCCCCc
Q 005411 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (698)
Q Consensus 351 ~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (698)
+++ ..++..+ +-+..-.|++++++++...
T Consensus 334 ~~~-~gl~~~~----al~~aT~~~A~~lg~~~~~ 362 (403)
T 3gnh_A 334 MVR-YGATPLQ----AIQSATLTAAEALGRSKDV 362 (403)
T ss_dssp HHH-TTCCHHH----HHHHTTHHHHHHHTCTTTS
T ss_pred HHH-cCCCHHH----HHHHHHHHHHHHhCCCCCc
Confidence 122 2467644 4566778999999997544
No 65
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=85.63 E-value=2.5 Score=44.99 Aligned_cols=32 Identities=3% Similarity=0.166 Sum_probs=23.6
Q ss_pred HHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005411 346 SVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 346 ~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
.++..+++.+.++..+ +-+.+..|++++++++
T Consensus 335 ~~~~~~~~~~~ls~~~----~l~~~T~n~A~~lgl~ 366 (426)
T 2z00_A 335 LLYTELHLKRGFPLQR----LVELFTDGPRRVLGLP 366 (426)
T ss_dssp HHHHHTHHHHCCCHHH----HHHHHTHHHHHHHTCC
T ss_pred HHHHHHHHcCCCCHHH----HHHHHhhhHHHHhCCC
Confidence 3445566667788754 6677889999999995
No 66
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=85.35 E-value=2.5 Score=45.68 Aligned_cols=163 Identities=12% Similarity=0.128 Sum_probs=83.1
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCC--------------CCCC-CCCCCcc-----chHHHHhhcCCCCcEEEEecCCCcc
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPF 274 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G~--------------~~~~-~~~~~p~-----~L~~l~~~~~~P~~~~vllH~g~p~ 274 (698)
.+..+++.+.++|+|+.+|..... .+.. ...+.|. .+..+++-.+.-+.++.+.|.+...
T Consensus 170 ~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~~i~H~s~~~ 249 (448)
T 3hm7_A 170 TLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHICHVSSRK 249 (448)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCCCHH
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHH
Confidence 344557888899999999985311 0000 0001111 1222222111236889999987554
Q ss_pred hHHHHHHHHhC-CeeeeecccccCcccHH------------------HHHHHHHHHHhhCCCCcEEEecCCCCCccch--
Q 005411 275 SKEASYLAYVY-PQVYLDFGLAIPKLSVQ------------------GMISSIKELLELAPTKKVMFSTDAYASPETY-- 333 (698)
Q Consensus 275 ~~e~~~la~~~-pnVy~d~s~~~~~~~~~------------------g~~~~l~~~le~~~~~kilfgSD~~~~P~~~-- 333 (698)
..+....++.. -+|+++++.....+..+ .-+..+.+.+..+.. .+++||..++....
T Consensus 250 ~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~--~~i~tD~~p~~~~~k~ 327 (448)
T 3hm7_A 250 VLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEI--DLISSDHSPSLPQMKT 327 (448)
T ss_dssp HHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCC--CEECCCBCCCCGGGGC
T ss_pred HHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCc--cEEEeCCCCCCHHHcc
Confidence 44444444332 37888876522111111 112344555544433 56899954332110
Q ss_pred ----h---hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCCC
Q 005411 334 ----F---LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (698)
Q Consensus 334 ----~---~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (698)
+ .+.--....+..++..++..+.++..+ +-+++..|++++|+++..
T Consensus 328 ~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~----~~~~~t~~~A~~~g~~~~ 380 (448)
T 3hm7_A 328 GKTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQ----IVQLLSTEPAKRFGLYPQ 380 (448)
T ss_dssp CSSTTTSCCCBCCTTTHHHHHHHHTTTTTCCCHHH----HHHHHTHHHHHHHTCTTT
T ss_pred cCCHhhCCCCCccHHHHHHHHHHHHHhcCCcCHHH----HHHHHhHHHHHHcCCCCC
Confidence 0 000000012334455667677888754 667888999999999543
No 67
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=83.32 E-value=1.8 Score=46.41 Aligned_cols=84 Identities=13% Similarity=0.068 Sum_probs=49.8
Q ss_pred cHHHHHHHHHHHHHhhccc-ccceeeeeccccCCCCCCCCCHHHHHHHHHHHHhcCC----CCccCc--hhhhhHHHHHH
Q 005411 147 TLDVFIETFLKQLRSAANK-IVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGK----PVRITN--KSLIDYIFISS 219 (698)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~-~vgfksi~~y~~gl~~~~~~~~~ea~~~~~~~l~~~~----~~~~~~--~~l~d~~~~~~ 219 (698)
+++++++++.+.++.+... -+..+.|.|..+.+ +++++.+.+..+..... +..+.. .......+.++
T Consensus 129 ~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~------~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~ 202 (380)
T 4gxw_A 129 PYADAQAAIVTGMRDAARDFGIGARLIPSIDREQ------DPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKA 202 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTS------CHHHHHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCC------CHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHH
Confidence 5777888877777655321 14566677664443 46666666655443210 111111 11112235778
Q ss_pred HHHHhhCCCcEEEecCC
Q 005411 220 LEVAQFLDLPLQIHTGF 236 (698)
Q Consensus 220 ~e~a~e~glpvq~H~G~ 236 (698)
++.|.+.|+++.+|.|-
T Consensus 203 f~~ar~~Gl~~t~HAGE 219 (380)
T 4gxw_A 203 YRDARAAGFRTTAHAGE 219 (380)
T ss_dssp HHHHHHTTCEEEEEESC
T ss_pred HHHHHHcCCCeeeeccc
Confidence 99999999999999996
No 68
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=80.92 E-value=13 Score=38.58 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=68.8
Q ss_pred HHHHHHHhh-CCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCC--c---------chHHHHHHHHh
Q 005411 217 ISSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY--P---------FSKEASYLAYV 284 (698)
Q Consensus 217 ~~~~e~a~e-~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~--p---------~~~e~~~la~~ 284 (698)
..+++.+.+ +|+||.+|.+.++. ....+...++ + . . ++.|+.. + ...+....+.
T Consensus 171 ~~~~~~a~~~~g~~v~~H~~~~~~-------~~~~~~~~~~--~-g--~-~~~H~~~~~~~~~~~~s~~~~~~~~~~~~- 236 (379)
T 2ics_A 171 ELAKQIQQENQEIPLMVHIGSAPP-------HLDEILALME--K-G--D-VLTHCFNGKENGILDQATDKIKDFAWQAY- 236 (379)
T ss_dssp HHHHHHHHTTTTCCEEEEECSSSS-------CHHHHHHHCC--T-T--C-EEESTTCCSTTSSEETTTTEECHHHHHHH-
T ss_pred HHHHHHHHHhcCCeEEEeCCCCcc-------hHHHHHHHhh--c-C--C-eeeeccCCCccchhhccCHHHHHHHHHHH-
Confidence 345788889 99999999975321 1112222233 1 1 2 4567621 1 0113222222
Q ss_pred CCeeeeecccccCcccHHHHHHHHHHHHhhC-CCCcEEEecCCCC-----CccchhhhHHHHHHHHHHHHHhhhhcCCCC
Q 005411 285 YPQVYLDFGLAIPKLSVQGMISSIKELLELA-PTKKVMFSTDAYA-----SPETYFLGAKRAREVVFSVLRDTCIDEDLS 358 (698)
Q Consensus 285 ~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~-~~~kilfgSD~~~-----~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~ 358 (698)
..+++++++...+.... ..++++++.+ +.+ +++||+.. -|.. .+...+..+++. .++
T Consensus 237 ~~g~~~~~~p~~~~~~~----~~~~~~~~~G~~~~--~l~TD~~~~~~~~~~~~----------~~~~~l~~~~~~-~ls 299 (379)
T 2ics_A 237 NKGVVFDIGHGTDSFNF----HVAETALREGMKAA--SISTDIYIRNRENGPVY----------DLATTMEKLRVV-GYD 299 (379)
T ss_dssp HTTCEEECCCTTTSCCH----HHHHHHHHTTCCCS--BCCCCBCHHHHHSSSCC----------CHHHHHHHHHHH-TCC
T ss_pred HcCCEEEecCCCCCcCH----HHHHHHHHcCCCcc--eEeccCcccCCCCCcHh----------HHHHHHHHHHHc-CCC
Confidence 24688887633222211 2466667764 544 88999531 0111 112222333332 377
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCC
Q 005411 359 VGEAIEVAKDIFALNAAQFYKINL 382 (698)
Q Consensus 359 ~~ea~~~~~~Il~~NA~rly~l~~ 382 (698)
.. .+-+.+..|++|+|+++.
T Consensus 300 ~~----~~~~~~T~n~A~~lgl~~ 319 (379)
T 2ics_A 300 WP----EIIEKVTKAPAENFHLTQ 319 (379)
T ss_dssp HH----HHHHTTTHHHHHHTTCTT
T ss_pred HH----HHHHHHHHHHHHHhCCCC
Confidence 64 466778899999999964
No 69
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=78.38 E-value=5.5 Score=46.49 Aligned_cols=113 Identities=15% Similarity=0.054 Sum_probs=70.3
Q ss_pred eeeecCCCCCceEEecCcCc-hHHHHHHHHHHHHHHHHHH-HHcCCeeeecc-c------cCCC----------------
Q 005411 583 EQLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVA-RKHGLLATFVP-K------FALD---------------- 637 (698)
Q Consensus 583 e~~h~E~gpgQ~Ei~l~p~~-~l~aaD~l~~~r~~ik~vA-~~~Gl~ATFmp-K------P~~~---------------- 637 (698)
.++.+|..-.|.|+..++.. .-++.+.+...|.++.+.+ ....+.+.=|| . |+..
T Consensus 53 ~~i~~d~~es~lE~~Tpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lw~~smp~~l~~~~i~ia~~~~~~~~~Yr~~l~~r 132 (750)
T 3ln6_A 53 PYIQTDYSEPQLELITPIAKDSQEAIRFLKAISDVAGRSINHDEYLWPLSMPPKVREEDIQIAQLEDAFEYDYRKYLEKT 132 (750)
T ss_dssp SSEEESSBSSEEEEECCCBSSHHHHHHHHHHHHHHHHHHSCTTEEECCSSSCSSCCTTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCccchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeecCCCCCCCCCCCcccCCCCCcHHHHHHHHHH
Confidence 36788999999999999976 6668888888888888875 43333333232 1 2221
Q ss_pred -----CCCcccccccccccCCccccccCCC-CC-CCCCcHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 005411 638 -----DIGSGSHVHLSLWQNGENVFMASDS-SS-KHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 695 (698)
Q Consensus 638 -----~~GsG~H~H~Sl~~~g~n~f~~~d~-~~-~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~n 695 (698)
..=+|+|+|+|+-+..-..++..+. .+ ..-.|...-..+-+++.+.|-|++++..++-
T Consensus 133 yg~~~q~i~G~Hvn~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~l~r~~~r~~w~l~~L~gaSP~ 197 (750)
T 3ln6_A 133 YGKLIQSISGIHYNLGLGQELLTSLFELSQADNAIDFQNQLYMKLSQNFLRYRWLLTYLYGASPV 197 (750)
T ss_dssp HCTGGGGCCCEEEEEEECHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred hChhhceeeeEEEEecCChHHHHHHhhccccchHHHHhhhHHHHHHHHHHhHHHHHHHHhhCCcc
Confidence 1237999999995432111110000 00 0112333445678899999999999987763
No 70
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=74.90 E-value=8.8 Score=41.11 Aligned_cols=159 Identities=11% Similarity=0.044 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCC---CC--------C-CCCCCcc-----chHHHHhhcCCCCcEEEEecCCCcch
Q 005411 213 DYIFISSLEVAQFLDLPLQIHTGFGDK---DL--------D-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPFS 275 (698)
Q Consensus 213 d~~~~~~~e~a~e~glpvq~H~G~G~~---~~--------~-~~~~~p~-----~L~~l~~~~~~P~~~~vllH~g~p~~ 275 (698)
+-.+..+++.+.++|+|+++|...... +. . ...+.|. .+...+.-.+..++++.+.|.+....
T Consensus 157 ~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~s~~~~ 236 (424)
T 3gri_A 157 ASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKES 236 (424)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHH
Confidence 334556678889999999999865320 00 0 0011221 11111111134578999999976554
Q ss_pred HHHHHHHHhC-Ceeeeeccccc------------------CcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccch---
Q 005411 276 KEASYLAYVY-PQVYLDFGLAI------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETY--- 333 (698)
Q Consensus 276 ~e~~~la~~~-pnVy~d~s~~~------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~--- 333 (698)
.+....++.. -+|+.+++... |-+....-+..+.+.+..+..+ +++||.-++....
T Consensus 237 ~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~--~igtDhap~~~~~k~~ 314 (424)
T 3gri_A 237 VRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTID--CIATDHAPHARDEKAQ 314 (424)
T ss_dssp HHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSC--EECCCBCCCCHHHHTS
T ss_pred HHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCce--EEEcCCCCCCHHHccC
Confidence 4444444333 35666654321 1010011233455555544333 6899953332100
Q ss_pred -----h---hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcC
Q 005411 334 -----F---LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (698)
Q Consensus 334 -----~---~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (698)
+ .+.+ ..+..++..++.++.++..+ +-+.+..|+++++++
T Consensus 315 ~~~~~~~G~~g~e---~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~ 362 (424)
T 3gri_A 315 PMEKAPFGIVGSE---TAFPLLYTHFVKNGDWTLQQ----LVDYLTIKPCETFNL 362 (424)
T ss_dssp CTTTSCCCCCCTT---THHHHHHHHHTTTSSCCHHH----HHHHHTHHHHHHTTC
T ss_pred CHhHCCCCCcccc---ccHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHhCC
Confidence 0 0011 12334455677788898754 555667899999998
No 71
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=73.65 E-value=8 Score=41.35 Aligned_cols=159 Identities=13% Similarity=0.070 Sum_probs=82.0
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCCC---CC--------CC-CCCCcc-----chHHHHhhcCCCCcEEEEecCCCcchH
Q 005411 214 YIFISSLEVAQFLDLPLQIHTGFGDK---DL--------DL-RLSNPL-----HLRAILEDKRFSKCRFVLLHASYPFSK 276 (698)
Q Consensus 214 ~~~~~~~e~a~e~glpvq~H~G~G~~---~~--------~~-~~~~p~-----~L~~l~~~~~~P~~~~vllH~g~p~~~ 276 (698)
-.+..+++.+.++|+|+.+|..-... +. .+ ..+.|. .+...+.--+..+.++.+.|.+.....
T Consensus 159 ~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~H~s~~~~~ 238 (428)
T 3mpg_A 159 SMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVSTKGSV 238 (428)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEECCChhHhhhHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHH
Confidence 34556678899999999999964310 00 00 011121 111111111245788999999754433
Q ss_pred HHHHHHHhC-Ceeeeeccccc------------------CcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccch----
Q 005411 277 EASYLAYVY-PQVYLDFGLAI------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETY---- 333 (698)
Q Consensus 277 e~~~la~~~-pnVy~d~s~~~------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~---- 333 (698)
+....++.. -+|+++++... |-.....-+..+.+.+..+..+ +.+||..+++...
T Consensus 239 ~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~--~i~tDh~p~~~~~k~~~ 316 (428)
T 3mpg_A 239 RVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTID--MIATDHAPHTAEEKAQG 316 (428)
T ss_dssp HHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSC--CBCCCBCCCCTTGGGSC
T ss_pred HHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCc--EEEcCCCCCCHHHcccC
Confidence 434334332 25666543210 1010011233455555555444 6899954432100
Q ss_pred -------hhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005411 334 -------FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 334 -------~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
..+.+ ..+..++..++..+.++..+ +-+.+..|++++|+++
T Consensus 317 ~~~~p~g~~g~e---~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~~ 364 (428)
T 3mpg_A 317 IERAPFGITGFE---TAFPLLYTNLVKKGIITLEQ----LIQFLTEKPADTFGLE 364 (428)
T ss_dssp TTTSCSCCCCTT---THHHHHHHHTTTTTSSCHHH----HHHTTTHHHHHHHTCS
T ss_pred HhhCCCCceehh---hHHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHhCCC
Confidence 00000 12334556667778888754 5566678999999996
No 72
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=73.10 E-value=12 Score=40.74 Aligned_cols=158 Identities=16% Similarity=0.157 Sum_probs=80.2
Q ss_pred HHHHHHHHHhhCCCcEEEecCCC--------------CCCCC-CCCCCcc-----chHHHHhhcCCCCcEEEEecCCCcc
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFG--------------DKDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPF 274 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G--------------~~~~~-~~~~~p~-----~L~~l~~~~~~P~~~~vllH~g~p~ 274 (698)
.+..+++.++++|+++.+|.... ..+.. ...+.|. .+..++.-.+.-+.++.+.|.+...
T Consensus 188 ~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~lhi~Hvst~~ 267 (473)
T 3e74_A 188 QFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPE 267 (473)
T ss_dssp HHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECSCCSHH
T ss_pred HHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHH
Confidence 44555778888999999997531 00000 0012221 1222222111235899999987544
Q ss_pred hHHHHHHHHh-CCeeeeecccccCccc------------------HHHHHHHHHHHHhhCCCCcEEEecCCCCCccch--
Q 005411 275 SKEASYLAYV-YPQVYLDFGLAIPKLS------------------VQGMISSIKELLELAPTKKVMFSTDAYASPETY-- 333 (698)
Q Consensus 275 ~~e~~~la~~-~pnVy~d~s~~~~~~~------------------~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~-- 333 (698)
..+....++. -.+|+.+++....... ...-+..+.+.++.+ ....++||..++....
T Consensus 268 ~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G--~~~~i~tDh~p~~~~~k~ 345 (473)
T 3e74_A 268 GVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNG--EIDCLVSDHSPCPPEMKA 345 (473)
T ss_dssp HHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTT--CCCEECCCBCCCCTTTTC
T ss_pred HHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCC--CCcEEEeCCCCCCHHHcc
Confidence 4344333332 2467777654211110 011123444444433 2346899965443110
Q ss_pred ------h---hhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005411 334 ------F---LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 334 ------~---~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
+ .+.+ ..+..++.+.+.++.++..+ +-+.+..|++++++++
T Consensus 346 ~~f~~~~~G~~g~e---~~l~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~~ 395 (473)
T 3e74_A 346 GNIMKAWGGIAGLQ---SCMDVMFDEAVQKRGMSLPM----FGKLMATNAADIFGLQ 395 (473)
T ss_dssp SCTTTSCCCBCCGG---GHHHHHHHHHTTTTCCCHHH----HHHHHTHHHHHHTTCT
T ss_pred cChhhcCCCcccHH---hHHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHhCCC
Confidence 0 0111 12333445567778898754 5556678999999996
No 73
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=70.86 E-value=35 Score=38.62 Aligned_cols=136 Identities=14% Similarity=-0.028 Sum_probs=74.7
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeee
Q 005411 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (698)
Q Consensus 212 ~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d 291 (698)
.+..+...++.|.++|+||..|.... ....|..+.+. - +.. .|+.... .++...... .+|+.
T Consensus 200 ~d~~l~~~l~~A~~~g~pV~~Ha~~~---------~~~~L~~~~~a--G--v~~--~H~~~~~-eea~e~l~~--G~~i~ 261 (608)
T 3nqb_A 200 RDPRMSGIVQAGLAAEKLVCGHARGL---------KNADLNAFMAA--G--VSS--DHELVSG-EDLMAKLRA--GLTIE 261 (608)
T ss_dssp TCHHHHHHHHHHHHHTCEEEECCTTC---------CHHHHHHHHHT--T--CCE--ECCCCSH-HHHHHHHHT--TCEEE
T ss_pred CcHHHHHHHHHHHHcCCEEEEcCCCC---------CHHHHHHHHHc--C--CCe--eeccCCH-HHHHHHHHC--CCEEE
Confidence 34456666888999999999997521 12234555552 2 222 6875543 455555443 66666
Q ss_pred cccccCcccHHHHHHHHHHHHh--hCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHH
Q 005411 292 FGLAIPKLSVQGMISSIKELLE--LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDI 369 (698)
Q Consensus 292 ~s~~~~~~~~~g~~~~l~~~le--~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~I 369 (698)
+.. ... + .. ..+..++. ..+..+++++||+. .|...+ ... .+...+...++. .++.. .+-+.
T Consensus 262 i~g-s~~--~-~~-~~l~~~i~~~~~~g~~v~lgTD~~-~p~~~~-~~g----~l~~~v~~~~~~-Gls~~----eal~~ 325 (608)
T 3nqb_A 262 LRG-SHD--H-LL-PEFVAALNTLGHLPQTVTLCTDDV-FPDDLL-QGG----GLDDVVRRLVRY-GLKPE----WALRA 325 (608)
T ss_dssp EES-SSG--G-GH-HHHHHHHHHHTSCCTTEEEECBSC-CHHHHH-HTC----SHHHHHHHHHHT-TCCHH----HHHHH
T ss_pred Eec-ccc--c-cH-HHHHHHHHhHhhcCceEEEecCCC-CCcchh-hhc----chHHHHHHHHHc-CCCHH----HHHHH
Confidence 651 111 1 11 23333443 34669999999953 232111 100 122233333333 46654 46677
Q ss_pred HHHHHHHHhcCC
Q 005411 370 FALNAAQFYKIN 381 (698)
Q Consensus 370 l~~NA~rly~l~ 381 (698)
...|++++|+++
T Consensus 326 aT~n~A~~lgl~ 337 (608)
T 3nqb_A 326 ATLNAAQRLGRS 337 (608)
T ss_dssp HTHHHHHHHTCT
T ss_pred HHHHHHHHcCCC
Confidence 889999999994
No 74
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=65.54 E-value=53 Score=34.42 Aligned_cols=137 Identities=10% Similarity=0.031 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeeec
Q 005411 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDF 292 (698)
Q Consensus 213 d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d~ 292 (698)
+-.+..+++.|.++|+++.+|... + ..+..+++.+ . -.+.|+.+-....+..++.. ++++.+
T Consensus 215 ~~~l~~~~~~A~~~g~~v~~H~~~-~----------~~i~~~~~~g--~---~~i~H~~~~~~~~i~~l~~~--gv~v~p 276 (418)
T 2qs8_A 215 QEEVDAVVSAAKDYGMWVAVHAHG-A----------EGMKRAIKAG--V---DSIEHGTFMDLEAMDLMIEN--GTYYVP 276 (418)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECS-H----------HHHHHHHHHT--C---SEEEECTTCCHHHHHHHHHH--TCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEEEECC-H----------HHHHHHHHcC--C---CEEEECCCCCHHHHHHHHHC--CCEEee
Confidence 334556688889999999999952 1 1244444421 1 24578754333333333332 455543
Q ss_pred ccc-------------cCccc--HH------HHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhh
Q 005411 293 GLA-------------IPKLS--VQ------GMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDT 351 (698)
Q Consensus 293 s~~-------------~~~~~--~~------g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~ 351 (698)
... ++... .. .....++++++.+. ++.+|||+...|.... ....+ .+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~~--~~e~~--------~~ 344 (418)
T 2qs8_A 277 TISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGV--KIAFGTDAGVQKHGTN--WKEFV--------YM 344 (418)
T ss_dssp CHHHHHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTC--CBCCCCCBTTBCTTCT--THHHH--------HH
T ss_pred eechHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEeCCCCcCCcchH--HHHHH--------HH
Confidence 310 11000 00 00124667777553 6889999754442111 11111 12
Q ss_pred hhcCCCChhHHHHHHHHHHHHHHHHHhcCCCCc
Q 005411 352 CIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (698)
Q Consensus 352 v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (698)
++. .++..+ +-+..-.|++++++++...
T Consensus 345 ~~~-gls~~e----al~~~T~n~A~~lg~~~~~ 372 (418)
T 2qs8_A 345 VEN-GMPAMK----AIQSATMETAKLLRIEDKL 372 (418)
T ss_dssp HHT-TCCHHH----HHHHTTHHHHHHTTCTTTS
T ss_pred HHc-CCCHHH----HHHHHHHHHHHHhCCCCCC
Confidence 233 477654 4456678999999997543
No 75
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=64.56 E-value=40 Score=36.60 Aligned_cols=158 Identities=15% Similarity=0.128 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCC----CC--CCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCC
Q 005411 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LR--LSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYP 286 (698)
Q Consensus 213 d~~~~~~~e~a~e~glpvq~H~G~G~~~~~----~~--~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~p 286 (698)
+-.+..+.+.|.++|+++++|.+-...... .. ...| ++ ++.+-.+.+-+.++.|+-+--..+...++..--
T Consensus 242 ~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~~~~--~~-~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~ 318 (476)
T 4aql_A 242 ETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNY--TS-VYDKNNLLTNKTVMAHGCYLSAEELNVFHERGA 318 (476)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHCTTSSSH--HH-HHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHhCCCCCH--HH-HHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCC
Confidence 344566788999999999999975311000 00 0122 22 222112335578899996654555555554432
Q ss_pred eeeeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHH--HHHHHh-hhhcCCCChhHHH
Q 005411 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVV--FSVLRD-TCIDEDLSVGEAI 363 (698)
Q Consensus 287 nVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l--~~vl~~-~v~~g~l~~~ea~ 363 (698)
.|-..... +.....|. .-++++++.+ -++.+|||+.+..... -...+|... .+.+.. ......++..+
T Consensus 319 ~v~~~P~s--n~~l~~g~-~p~~~~~~~G--v~v~lGtD~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~l~~~~-- 389 (476)
T 4aql_A 319 SIAHCPNS--NLSLSSGF-LNVLEVLKHE--VKIGLGTDVAGGYSYS--MLDAIRRAVMVSNILLINKVNEKSLTLKE-- 389 (476)
T ss_dssp EEEECHHH--HHHTTCCC-CCHHHHHHTT--CEEEECCCTTTSSCCC--HHHHHHHHHHHHHHHHHTTSSSSCCCHHH--
T ss_pred EEEECchh--hhhhCcch-HHHHHHHHCC--CcEEEeCCCCCCCCCC--HHHHHHHHHHHHhhhhcccCCCCcCCHHH--
Confidence 22111100 00000000 0244455544 3778999965321111 112222221 111111 01124566543
Q ss_pred HHHHHHHHHHHHHHhcCCCCc
Q 005411 364 EVAKDIFALNAAQFYKINLGV 384 (698)
Q Consensus 364 ~~~~~Il~~NA~rly~l~~~~ 384 (698)
+=+..-.|+++.++++...
T Consensus 390 --al~~aT~~~A~~lgl~~~~ 408 (476)
T 4aql_A 390 --VFRLATLGGSQALGLDGEI 408 (476)
T ss_dssp --HHHHHTHHHHHHTTCTTTS
T ss_pred --HHHHHHHHHHHHhCCCCCc
Confidence 4445567888899986543
No 76
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=61.56 E-value=45 Score=35.35 Aligned_cols=157 Identities=18% Similarity=0.129 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCC----CCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCee
Q 005411 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (698)
Q Consensus 213 d~~~~~~~e~a~e~glpvq~H~G~G~~~~~----~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnV 288 (698)
+-.+..+++.|.++|+|+.+|......... .....+ +..+.+. ...+-+.++.|+.+....++..++.. ++
T Consensus 199 ~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~~~~~--g~ 273 (447)
T 4f0r_A 199 DDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRP--LARLQRL-GLLSPRLVAAHMVHLNDAEVELAARH--GL 273 (447)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHc--CC
Confidence 334556688899999999999964310000 000111 2222222 34566788999965444455555543 34
Q ss_pred eeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhh--hcCCCChhHHHHHH
Q 005411 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVA 366 (698)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v--~~g~l~~~ea~~~~ 366 (698)
++..+...+.....+. .-++++++.+ -++.+|||+...+.. ......++.. ..+.... ....++..+ +
T Consensus 274 ~~~~~p~~~~~~~~~~-~~~~~~~~~G--v~v~lgTD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~~----a 343 (447)
T 4f0r_A 274 STAHNPASNMKLASGI-SPVSKLMDAG--VAVGIGTDGAASNNK-LDMLAETRLA--ALLAKVGTLDPTSVPAAA----A 343 (447)
T ss_dssp EEEECHHHHHHTTCCC-CCHHHHHHTT--CEEEECCCCGGGTCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHHH----H
T ss_pred EEEECchhhhhcCCCC-CcHHHHHHCC--CcEEEeCCCCcCCCC-CCHHHHHHHH--HHHhhhhccCCCCCCHHH----H
Confidence 4433221100000010 1244555543 278899996533111 0111112211 1122222 124566543 5
Q ss_pred HHHHHHHHHHHhcCCCCc
Q 005411 367 KDIFALNAAQFYKINLGV 384 (698)
Q Consensus 367 ~~Il~~NA~rly~l~~~~ 384 (698)
-+..-.|++++++++...
T Consensus 344 l~~~T~n~A~~lg~~~~~ 361 (447)
T 4f0r_A 344 IRMATLNGARALGIADKV 361 (447)
T ss_dssp HHHHTHHHHHHTTCTTTS
T ss_pred HHHHHHHHHHHhCCCCCc
Confidence 556778999999997543
No 77
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=60.93 E-value=79 Score=32.83 Aligned_cols=132 Identities=14% Similarity=0.073 Sum_probs=68.8
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeeeccc
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGL 294 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d~s~ 294 (698)
.+..+++.|.++|+++.+|.... ..+..+++.+ . -.+.|+.+.. .+...++.. .++++-...
T Consensus 207 ~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~~~~~g--~---~~i~H~~~~~-~~~i~~~~~-~g~~v~~~~ 268 (408)
T 3be7_A 207 EMKAIVDEAHNHGMKVAAHAHGL-----------IGIKAAIKAG--V---DSVEHASFID-DETIDMAIK-NNTVLSMDI 268 (408)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSH-----------HHHHHHHHHT--C---SEEEECTTCC-HHHHHHHHH-TTCEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcC--C---CEEEECCCCC-HHHHHHHHH-CCCEEeeee
Confidence 34556788899999999999531 1244444432 1 2567875443 344444433 234443221
Q ss_pred ccC----------cccHH------HH----HHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhc
Q 005411 295 AIP----------KLSVQ------GM----ISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCID 354 (698)
Q Consensus 295 ~~~----------~~~~~------g~----~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~ 354 (698)
... ..++. +. ...++++++.+. ++++|||+.+.|.... ....+ . +++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~~~~gTD~~~~p~~~~--~~~~~-----~---~~~~ 336 (408)
T 3be7_A 269 FVSDYILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGA--IITFGTDAGIFDHGDN--AKQFA-----Y---MVEW 336 (408)
T ss_dssp STHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--CEECCCCBTTBCTTCG--GGHHH-----H---HHHT
T ss_pred cHHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEECCCCCCCCchH--HHHHH-----H---HHHc
Confidence 100 01110 00 123555555443 6889999765453211 11111 1 2233
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005411 355 EDLSVGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 355 g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
.++..+ +-+..-.|++++++++
T Consensus 337 -gls~~~----al~~~T~n~A~~lgl~ 358 (408)
T 3be7_A 337 -GMTPLE----AIQASTIKTATLFGIE 358 (408)
T ss_dssp -TCCHHH----HHHTTTHHHHHHHTCS
T ss_pred -CCCHHH----HHHHHHHHHHHHhCCC
Confidence 477654 4456678999999997
No 78
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=60.58 E-value=61 Score=34.82 Aligned_cols=162 Identities=14% Similarity=0.101 Sum_probs=81.3
Q ss_pred HHHHHHHHhhCCCcEEEecCCC--------------CCCCCC-CCCCcc-----chHHHHhhcCCCCcEEEEecCCCcch
Q 005411 216 FISSLEVAQFLDLPLQIHTGFG--------------DKDLDL-RLSNPL-----HLRAILEDKRFSKCRFVLLHASYPFS 275 (698)
Q Consensus 216 ~~~~~e~a~e~glpvq~H~G~G--------------~~~~~~-~~~~p~-----~L~~l~~~~~~P~~~~vllH~g~p~~ 275 (698)
+..+++.+.++|+++.+|.-.. ..+... ....|. .+...+.-.+..+.++.+.|.+..-.
T Consensus 166 l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~s~~~~ 245 (461)
T 3sfw_A 166 LFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHVSCADA 245 (461)
T ss_dssp HHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSCCSHHH
T ss_pred HHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEecCcHHH
Confidence 3445677888999999996421 000000 011121 11222221124489999999975443
Q ss_pred HHHHHHHHhC-Ceeeeeccccc---------------------CcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCc-cc
Q 005411 276 KEASYLAYVY-PQVYLDFGLAI---------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ET 332 (698)
Q Consensus 276 ~e~~~la~~~-pnVy~d~s~~~---------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-~~ 332 (698)
.+....++.. .+|+.+++... |-+-...-+..+.+.+..+ ...+++||..++. +.
T Consensus 246 l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G--~~~~i~sD~~p~~~~~ 323 (461)
T 3sfw_A 246 VRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNG--ILQTVGSDHCPFNFSG 323 (461)
T ss_dssp HHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTT--SSCEECCCBCCCCTTT
T ss_pred HHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcC--CceEEECCCCCCCchh
Confidence 3444444332 46666554310 1010011123445555433 3357899965544 10
Q ss_pred h-------hh----hHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCCC
Q 005411 333 Y-------FL----GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (698)
Q Consensus 333 ~-------~~----~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~ 383 (698)
. +. +.--....+..++...+..+.++..+ +-..+..|++++++++..
T Consensus 324 ~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~----~~~~~t~~~a~~~g~~~~ 381 (461)
T 3sfw_A 324 QKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLNQ----FVDITSTKVAKLFGMFPQ 381 (461)
T ss_dssp TGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHHH----HHHHHTHHHHHHHTCTTT
T ss_pred hhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHHH----HHHHHhHHHHHHcCCCCC
Confidence 0 00 00000112344556677788898754 556778899999999543
No 79
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=60.43 E-value=34 Score=39.83 Aligned_cols=113 Identities=16% Similarity=0.136 Sum_probs=68.9
Q ss_pred eeeecCCCCCceEEecCcCc-hHHHHHHHHHHHHHHHHHH-HHcCCeeeecc----c----cCCC---------------
Q 005411 583 EQLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVA-RKHGLLATFVP----K----FALD--------------- 637 (698)
Q Consensus 583 e~~h~E~gpgQ~Ei~l~p~~-~l~aaD~l~~~r~~ik~vA-~~~Gl~ATFmp----K----P~~~--------------- 637 (698)
.++.+|..-.|.|+..++.. .-++-+.+-..+.++.+.+ ....+.+.=|| . |+..
T Consensus 52 ~~i~td~ses~lE~iTpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lwp~smp~~l~~~~~ip~a~~~~~~~~~Yr~~L~~ 131 (757)
T 3ln7_A 52 PYIQTDFAESQLELITPPTKKLEDTFRWLSVIHEVVQRSLPEEEYIFPLSMPAGLPAEEQIRVAQLDNPEDVAYREYLVK 131 (757)
T ss_dssp SSEECSSSTTEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCTTEECCCSSSCSBCCC---CCCCCCSSHHHHHHHHHHHH
T ss_pred CCCCchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCCCCCCCccccCCCccHHHHHHHHH
Confidence 46788999999999999965 6678888888888888775 44444333332 1 3321
Q ss_pred ------CCCcccccccccccCCc-cccccC-CCCC-CCCCcHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 005411 638 ------DIGSGSHVHLSLWQNGE-NVFMAS-DSSS-KHGMSSVGEKFMAGVLHHLSSILAFTAPVPN 695 (698)
Q Consensus 638 ------~~GsG~H~H~Sl~~~g~-n~f~~~-d~~~-~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~n 695 (698)
..=+|+|+|+|+-+.-- .++... +..+ ..-.|...-.-+-+++.+.+-|++++..++-
T Consensus 132 ryG~~~q~i~GiH~n~s~~~~~~~~l~~~~~~~~~~~~~~~~~Y~~l~r~~~r~~wll~yL~gaSP~ 198 (757)
T 3ln7_A 132 IYGKNKQMVSGIHYNFQLSPDLITRLFRLQNEYQSAVDFQNDLYLKMAKNFLRYQWILLYLLAATPT 198 (757)
T ss_dssp HHCSHHHHCCCCEEEEEECHHHHHHHHHHCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCC
T ss_pred HhchhhceeeeEEEEEecChHHHHHHhhhcccchhHHHHHhHHHHHHHHhhHhHHHHHHHHhhCCcc
Confidence 01379999999954211 111100 0000 0112233334577888899999999887763
No 80
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=60.03 E-value=27 Score=31.27 Aligned_cols=90 Identities=17% Similarity=0.126 Sum_probs=63.9
Q ss_pred HHHHHHHHHhcCceeeeeeeeEEEEEeecccCCCCCceeCCCCCcccCccccCchHHHHHHHHHHHhCCCceeeee---c
Q 005411 511 RKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLH---A 587 (698)
Q Consensus 511 ~r~~~~l~~~~G~~~~~g~E~EF~l~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~GI~ve~~h---~ 587 (698)
+++++.|+ +-|..+..-.++||++.=+ -.+-++.+...+.+.|..|+..- .
T Consensus 22 ~~Vl~~L~-e~Gddl~~~r~IEH~~~F~-------------------------de~~~e~~a~~~~~~Gy~v~~~~~~e~ 75 (132)
T 1nxi_A 22 RDIIQALL-EDGSDPDALYEIEHHLFAE-------------------------DFDKLEKAAVEAFKMGFEVLEAEETED 75 (132)
T ss_dssp HHHHHHHH-HHTCCTTSCEEEEEEEEES-------------------------CHHHHHHHHHHHHHHTCCCBCCCCBCC
T ss_pred HHHHHHHH-hCCCCcCCCeEEEEEEEeC-------------------------CHHHHHHHHHHHHHCCCEEEecccccC
Confidence 46677787 5699999999999998743 13556777888888999886322 2
Q ss_pred CCCCCceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCe
Q 005411 588 EAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLL 627 (698)
Q Consensus 588 E~gpgQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ 627 (698)
|-|-..|++.+.....+...+-.-...++++ +|+++|-.
T Consensus 76 e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~-lA~~~~G~ 114 (132)
T 1nxi_A 76 EDGNKLLCFDATMQSALDAKLIDEQVEKLVN-LAEKFDII 114 (132)
T ss_dssp SSCSSBEEEEEEEEECSCHHHHHHHHHHHHH-HHHHHTCE
T ss_pred CCCceeEEEEEEEeccCCHHHHHHHHHHHHH-HHHHhCcE
Confidence 3333479999988888776665555555555 78887753
No 81
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=59.77 E-value=45 Score=34.87 Aligned_cols=137 Identities=12% Similarity=0.051 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeee
Q 005411 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (698)
Q Consensus 212 ~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d 291 (698)
.+-.+..+++.|.++|+++.+|.. ++ ..+...++.+. + .+.|+.......+..++.. ++++.
T Consensus 210 ~~e~l~~~~~~A~~~g~~v~~H~~-~~----------~~i~~~l~~g~--~---~i~H~~~~~~~~~~~l~~~--gv~~~ 271 (423)
T 3feq_A 210 SEDEIRAIVDEAEAANTYVMAHAY-TG----------RAIARAVRCGV--R---TIEHGNLVDEAAAKLMHEH--GAFVV 271 (423)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEE-EH----------HHHHHHHHHTC--C---EEEEEEECCHHHHHHHHHH--TCEEE
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeC-Ch----------HHHHHHHHcCC--C---EEeccCcCCHHHHHHHHHC--CCccc
Confidence 334456668899999999999996 21 12444444211 1 3456533222222333322 44442
Q ss_pred ccc--------------ccCcc--cHH----HHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhh
Q 005411 292 FGL--------------AIPKL--SVQ----GMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDT 351 (698)
Q Consensus 292 ~s~--------------~~~~~--~~~----g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~ 351 (698)
... +.+.. ... .....++.+++.+. ++.+|||+...|... ....++ . +
T Consensus 272 pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv--~v~~gTD~~~~~~~~--~~~e~~-----~---~ 339 (423)
T 3feq_A 272 PTLVTYDALAKHGAEFGMPPESVAKVASVQQKGRESLEIYANAGV--KMGFGSDLLGEMHAF--QSGEFR-----I---R 339 (423)
T ss_dssp CCTHHHHHHHHHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTC--CBCCCCCCCGGGGGG--TTHHHH-----H---H
T ss_pred cchHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEECCCCCCCCCcc--hHHHHH-----H---H
Confidence 210 11110 000 12234666776654 788999975433221 111111 1 1
Q ss_pred hhcCCCChhHHHHHHHHHHHHHHHHHhcCCCCc
Q 005411 352 CIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (698)
Q Consensus 352 v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (698)
.+. ++..+ +-+..-.|++++++++...
T Consensus 340 -~~~-ls~~e----al~~aT~~~A~~lg~~~~~ 366 (423)
T 3feq_A 340 -AEV-LGNLE----ALRSATTVAAEIVNMQGQL 366 (423)
T ss_dssp -HTT-SCHHH----HHHTTTHHHHHHTTCBTTB
T ss_pred -Hhh-CCHHH----HHHHHHHHHHHHhCCCCCc
Confidence 223 77654 4456778999999997543
No 82
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=58.60 E-value=1.2e+02 Score=32.48 Aligned_cols=154 Identities=16% Similarity=0.103 Sum_probs=71.8
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCC----CCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeee
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G~~~~----~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~ 290 (698)
.+..+++.|.++|+++.+|........ ......| ++.+.+. ...+-++++.|+.+--..++..++..- +.+
T Consensus 210 ~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~l~~~~i~~l~~~g--~~v 284 (472)
T 4dzh_A 210 NFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRP--LARLDRL-GLVNDRLIAVHMTQLTEAEIHLCAERG--VSV 284 (472)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHHT--CEE
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHHcC--CEE
Confidence 344557888999999999996431000 0000111 2222222 233557888999654444555555442 332
Q ss_pred ecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCC-ccchhhhHHHHHHHHHHHHHhhh--hcCCCChhHHHHHHH
Q 005411 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAK 367 (698)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-P~~~~~~~~~~R~~l~~vl~~~v--~~g~l~~~ea~~~~~ 367 (698)
......+.....+. .-++++++.+ -++.+|||+... +... ....+|... .+.... ....++..+ +=
T Consensus 285 ~~~p~s~~~~~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~~--~~~~~~~a~--~~~~~~~~~~~~l~~~~----al 353 (472)
T 4dzh_A 285 VHCPESNLKLASGF-CPACALQRAS--VNLAIGTDGCASNNDLD--MFSENRTAA--ILAKAVANDATALDAAT----TL 353 (472)
T ss_dssp EECHHHHHHTTCCC-CCHHHHHHTT--CEEEECCCCTTSSCCCC--HHHHHHHHH--HHHHHHHTCTTSSCHHH----HH
T ss_pred EEChHHHHhcCCCC-ccHHHHHHCC--CCEEEECCCCcCCCCCC--HHHHHHHHH--HHhhhhcCCCCcCCHHH----HH
Confidence 22110000000000 1244555544 378899996532 1111 111222111 111111 123466543 33
Q ss_pred HHHHHHHHHHhcCCCCc
Q 005411 368 DIFALNAAQFYKINLGV 384 (698)
Q Consensus 368 ~Il~~NA~rly~l~~~~ 384 (698)
+..-.|+++.++++...
T Consensus 354 ~~~T~~~A~~lgl~~~~ 370 (472)
T 4dzh_A 354 RAATLGGARALGFGDRI 370 (472)
T ss_dssp HHHTHHHHHHTTCTTTS
T ss_pred HHHHHHHHHHcCCCCCC
Confidence 45557899999987543
No 83
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=57.76 E-value=41 Score=36.53 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=34.8
Q ss_pred CcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhh-cCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005411 318 KKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI-DEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (698)
Q Consensus 318 ~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~-~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (698)
...++|||+........++. --.+..++..+++ .+.+++.+ +-..+..|++++++++.
T Consensus 358 ~~~~~gsD~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~----~~~~~t~~~a~~~g~~~ 416 (480)
T 3gip_A 358 PCCMVGSDGLPNDARPHPRL---WGSFTRVLGRYVREARLMTLEQ----AVARMTALPARVFGFAE 416 (480)
T ss_dssp TTEEECCCCCTTCSSCCTHH---HHHHHHHHHCCCCCTCSSCHHH----HHHHHTHHHHHHHTCTT
T ss_pred CCeEEecCCcccCCCCChhh---hhhHHHHHHHHhhhcCCCCHHH----HHHHHHHHHHHHcCCCC
Confidence 45778999744322111111 1134556777787 47788764 44556678889999953
No 84
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=56.09 E-value=1.3e+02 Score=31.69 Aligned_cols=155 Identities=16% Similarity=0.127 Sum_probs=74.0
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCC----CCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeee
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G~~~~~----~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~ 290 (698)
.+..+++.|.++|+++.+|......... .....+ ++.+.+. ...+-+.++.|+.+.-..++..++.. ++.+
T Consensus 203 ~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~l~~~--g~~v 277 (451)
T 4dyk_A 203 KLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERP--LARLHRL-GLLGPRFQAVHMTQVDNDDLAMLVET--NSSV 277 (451)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCCCCHHHHHHHHHH--TCEE
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHC-CCCCCCeEEEECCCCCHHHHHHHHHc--CCEE
Confidence 4556678899999999999964310000 000111 2222221 23456788899966544555555544 3333
Q ss_pred ecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhh--hcCCCChhHHHHHHHH
Q 005411 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAKD 368 (698)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v--~~g~l~~~ea~~~~~~ 368 (698)
......+.....+. .-++++++.+. ++.+|||+...+.. .......+.. ..+.... ....++..+ +=+
T Consensus 278 ~~~p~s~~~~~~~~-~~~~~~~~~Gv--~v~lgtD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----al~ 347 (451)
T 4dyk_A 278 IHCPESNLKLASGF-CPVEKLWQAGV--NVAIGTDGAASNND-LDLLGETRTA--ALLAKAVYGQATALDAHR----ALR 347 (451)
T ss_dssp EECHHHHHHTTCCC-CCHHHHHHHTC--CEEECCCCGGGSSC-CCHHHHHHHH--HHHHHHHHTCTTSSCHHH----HHH
T ss_pred EEChhhhhhccCCc-ccHHHHHhCCC--eEEEECCCCccCCC-CCHHHHHHHH--HHHhhhhcCCCCCCCHHH----HHH
Confidence 22211000000000 12445555443 78899996432110 1111222211 1111111 123566543 444
Q ss_pred HHHHHHHHHhcCCCCc
Q 005411 369 IFALNAAQFYKINLGV 384 (698)
Q Consensus 369 Il~~NA~rly~l~~~~ 384 (698)
..-.|+++.++++...
T Consensus 348 ~~T~~~A~~lg~~~~~ 363 (451)
T 4dyk_A 348 MATLNGARALGLERLI 363 (451)
T ss_dssp HHTHHHHHHHTCTTTS
T ss_pred HHHHHHHHHcCCCCCC
Confidence 5667899999987543
No 85
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=56.03 E-value=1.4e+02 Score=31.28 Aligned_cols=137 Identities=15% Similarity=0.065 Sum_probs=69.5
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeee
Q 005411 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (698)
Q Consensus 212 ~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d 291 (698)
.+-.+..+++.|.++|++|.+|.. ++ ..+...++.+ .+ .+.|+.+-. .+...++... ++++.
T Consensus 213 ~~e~l~~~~~~A~~~g~~v~~H~~-~~----------~~i~~al~~G--~~---~i~H~~~~~-~~~~~~~~~~-gv~~~ 274 (426)
T 2r8c_A 213 SEDEIRAIVAEAQGRGTYVLAHAY-TP----------AAIARAVRCG--VR---TIEHGNLID-DETARLVAEH-GAYVV 274 (426)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC-SH----------HHHHHHHHTT--CS---EEEECTTCC-HHHHHHHHHT-TCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeC-Ch----------HHHHHHHHcC--CC---EEecCCcCC-HHHHHHHHHc-CCeEe
Confidence 334455668889999999999996 21 1244455521 11 356774432 3333333222 44442
Q ss_pred ccccc--C--------cccH----------HHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhh
Q 005411 292 FGLAI--P--------KLSV----------QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDT 351 (698)
Q Consensus 292 ~s~~~--~--------~~~~----------~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~ 351 (698)
..... + ...+ ......++.+++.+ -++.+|||+...|... ..++ + .-+
T Consensus 275 pt~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~G--v~v~lgTD~~~~~~~~-----~~~e-~----~~~ 342 (426)
T 2r8c_A 275 PTLVTYDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAG--VKMGFGTDLLGEAQRL-----QSDE-F----RIL 342 (426)
T ss_dssp CCTHHHHHHHHHTTTTTCCHHHHTTSTTTGGGHHHHHHHHHHTT--CEECCCCCCCGGGGGG-----TTHH-H----HHH
T ss_pred echHHHHHHhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcC--CeEEEecCCCCCCCcc-----hHHH-H----HHH
Confidence 21000 0 0001 01223456666644 3778999975433221 1111 1 111
Q ss_pred hhcCCCChhHHHHHHHHHHHHHHHHHhcCCCCc
Q 005411 352 CIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (698)
Q Consensus 352 v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~~~ 384 (698)
.++ ++..+ +=+..-.|++++++++...
T Consensus 343 -~~~-l~~~e----al~~aT~~~A~~lg~~~~~ 369 (426)
T 2r8c_A 343 -AEV-LSPAE----VIASATIVSAEVLGMQDKL 369 (426)
T ss_dssp -TTT-SCHHH----HHHHTTHHHHHHTTCTTTS
T ss_pred -Hhc-CCHHH----HHHHHHHHHHHHhCCCCCC
Confidence 223 77654 4455678999999997543
No 86
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=54.51 E-value=51 Score=36.00 Aligned_cols=113 Identities=17% Similarity=0.101 Sum_probs=60.7
Q ss_pred CCcEEEEecCCCcchHHHHHHHHhC-CeeeeecccccCccc----------------------HHHHHHHHHHHHhhCCC
Q 005411 261 SKCRFVLLHASYPFSKEASYLAYVY-PQVYLDFGLAIPKLS----------------------VQGMISSIKELLELAPT 317 (698)
Q Consensus 261 P~~~~vllH~g~p~~~e~~~la~~~-pnVy~d~s~~~~~~~----------------------~~g~~~~l~~~le~~~~ 317 (698)
-+.++.+.|.+..-..+.+..++.. -+|+.+++.....+. ...-+..|.+.+..+..
T Consensus 228 ~g~~lhi~HvSt~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~i 307 (490)
T 3dc8_A 228 AGCPVYIVHTSCEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSL 307 (490)
T ss_dssp HTCCEEESSCCSHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSS
T ss_pred hCCcEEEEeCCCHHHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCc
Confidence 3689999998754434444444332 367776654210000 00112345555554433
Q ss_pred CcEEEecCCCCCccchhhhHHH---------------HHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005411 318 KKVMFSTDAYASPETYFLGAKR---------------AREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (698)
Q Consensus 318 ~kilfgSD~~~~P~~~~~~~~~---------------~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (698)
+ +++||.-++.. ..+. ....+.-++...|..+.+++.+ +-..+..|++++|++..
T Consensus 308 d--~i~sDh~p~~~----~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~----~~~~~t~~~A~~~gl~~ 377 (490)
T 3dc8_A 308 Q--VVATDHCAFTT----EQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNE----FVAVTSTNIAKILNIYP 377 (490)
T ss_dssp C--CCBCCBCCCCH----HHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHH----HHHHHTHHHHHHTTCTT
T ss_pred e--EEECCCCCCCH----HHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHHH----HHHHHHHHHHHHhCCCC
Confidence 3 57999543321 1110 0112333455567888899864 55566789999999954
Q ss_pred C
Q 005411 383 G 383 (698)
Q Consensus 383 ~ 383 (698)
.
T Consensus 378 ~ 378 (490)
T 3dc8_A 378 K 378 (490)
T ss_dssp T
T ss_pred C
Confidence 3
No 87
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=53.51 E-value=38 Score=35.46 Aligned_cols=133 Identities=16% Similarity=0.154 Sum_probs=67.5
Q ss_pred HHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeeeccc--ccCc
Q 005411 221 EVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGL--AIPK 298 (698)
Q Consensus 221 e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d~s~--~~~~ 298 (698)
..+.+.|+|+.+|+.... .....-.+++ ++ ++++.+.|+...+. .+..++.. ++++.++. .+..
T Consensus 214 ~~~~~~~~~v~iHa~~~~--------~i~~~~~~~~--~~-g~~~~i~H~~~~~~-~~~~l~~~--gv~v~~~P~~~~~~ 279 (396)
T 3ooq_A 214 EMVLRKKIPARMHAHRAD--------DILTAIRIAE--EF-GFNLVIEHGTEAYK-ISKVLAEK--KIPVVVGPLLTFRT 279 (396)
T ss_dssp HHHHTTSSCEEEEECSHH--------HHHHHHHHHH--HH-TCCEEEEECTTGGG-GHHHHHHH--TCCEEECCCSSCCC
T ss_pred HHHHcCCCcEEEEECchh--------HHHHHHHHHH--Hc-CCCEEEecCchHHH-HHHHHHHC--CCCEEECccccccc
Confidence 334588999999996421 1111222333 23 45788899864332 34445543 23333222 1111
Q ss_pred ccH--HHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHH
Q 005411 299 LSV--QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (698)
Q Consensus 299 ~~~--~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~r 376 (698)
... ......++.+++.+ -++.+|||++..|...+ .... .-.++ ..++.. .+-+..-.|+++
T Consensus 280 ~~~~~~~~~~~~~~l~~~G--v~v~lgtD~~~~~~~~l------~~~~----~~~~~-~gl~~~----~al~~~T~n~A~ 342 (396)
T 3ooq_A 280 KLELKDLTMETIAKLLKDG--VLIALMCDHPVIPLEFA------TVQA----ATAMR-YGAKEE----DLLKILTVNPAK 342 (396)
T ss_dssp SGGGTTCCTTHHHHHHHTT--CCEEECCTTTTSCGGGH------HHHH----HHGGG-GTCCHH----HHHHTTTHHHHH
T ss_pred chhHHhhhhHHHHHHHHCC--CEEEEEcCCCccCccHH------HHHH----HHHHH-cCCCHH----HHHHHHHHHHHH
Confidence 000 00012455666644 47889999765553211 1111 11122 246654 355667789999
Q ss_pred HhcCCCCc
Q 005411 377 FYKINLGV 384 (698)
Q Consensus 377 ly~l~~~~ 384 (698)
+++++...
T Consensus 343 ~lg~~~~~ 350 (396)
T 3ooq_A 343 ILGLEDRI 350 (396)
T ss_dssp HTTCTTTS
T ss_pred HhCCCCCe
Confidence 99997543
No 88
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=52.10 E-value=35 Score=38.04 Aligned_cols=35 Identities=17% Similarity=0.156 Sum_probs=25.2
Q ss_pred HHHHHHhhhhcCCC-ChhHHHHHHHHHHHHHHHHHhcCCC
Q 005411 344 VFSVLRDTCIDEDL-SVGEAIEVAKDIFALNAAQFYKINL 382 (698)
Q Consensus 344 l~~vl~~~v~~g~l-~~~ea~~~~~~Il~~NA~rly~l~~ 382 (698)
+..++..+|..+.+ +..+ +-..+..|++++|++..
T Consensus 400 l~~ll~~~v~~~~l~~~~~----~~~~~t~~~A~~lgl~~ 435 (559)
T 2fty_A 400 MPLLYDYGYLRGNLTSMMK----LVEIQCTNPAKVYGMYP 435 (559)
T ss_dssp HHHHHHHTTTTTSSSCHHH----HHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCCCCHHH----HHHHHhHHHHHHhCCCC
Confidence 34456667888888 8754 55667789999999953
No 89
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=48.11 E-value=75 Score=33.82 Aligned_cols=155 Identities=16% Similarity=0.102 Sum_probs=73.6
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCC----CCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeee
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G~~~~~----~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~ 290 (698)
.+..+++.|.++|+++.+|......... .....+ +..+.+. ...+-+.++.|+.+.-..++..++.. ++++
T Consensus 228 ~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~l~~~~~~~H~~~~~~~~~~~l~~~--g~~v 302 (468)
T 3lnp_A 228 PLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRP--TQRLADI-GFLNERVSCVHMTQVDDGDIKILQKT--GASI 302 (468)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCSCCHHHHHHHHHH--CCEE
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHhc--CCEE
Confidence 3445678889999999999964310000 000111 2222221 33456788999965444455555544 3333
Q ss_pred ecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhh--cCCCChhHHHHHHHH
Q 005411 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI--DEDLSVGEAIEVAKD 368 (698)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~--~g~l~~~ea~~~~~~ 368 (698)
......+.....+. ..++++++.+ -++.+|||+...+.. .......+.. ..+..... ...++..+ +-+
T Consensus 303 ~~~p~s~~~~~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~~----al~ 372 (468)
T 3lnp_A 303 IHCPESNLKLASGF-CPIAKLSAAN--IPLAIGTDGAASNND-LDMFSETKTA--ALLAKGVSQDASAIPAIE----ALT 372 (468)
T ss_dssp EECHHHHHHTTCCC-CCHHHHHHTT--CCEEECCCCTTSSCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHHH----HHH
T ss_pred EEChhhhhhcCCCC-CCHHHHHHCC--CeEEEECCCCcCCCC-CCHHHHHHHH--HHHhhhccCCCCcCCHHH----HHH
Confidence 32211100000000 1245555544 378899996543111 0111112211 11222221 34566643 444
Q ss_pred HHHHHHHHHhcCCCCc
Q 005411 369 IFALNAAQFYKINLGV 384 (698)
Q Consensus 369 Il~~NA~rly~l~~~~ 384 (698)
.+-.|++++++++...
T Consensus 373 ~~T~~~A~~lg~~~~~ 388 (468)
T 3lnp_A 373 MATLGGARALGIDDIT 388 (468)
T ss_dssp HHTHHHHHHTTCTTTS
T ss_pred HHHHHHHHHhCCCCCc
Confidence 5567899999987543
No 90
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A*
Probab=47.16 E-value=23 Score=39.24 Aligned_cols=109 Identities=10% Similarity=-0.077 Sum_probs=64.4
Q ss_pred eeecCCCCCceEEecCcCc-hHHHHHHHHHHHHHHHHHHHHcCCee--eecc----c----cCCCC--------------
Q 005411 584 QLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVARKHGLLA--TFVP----K----FALDD-------------- 638 (698)
Q Consensus 584 ~~h~E~gpgQ~Ei~l~p~~-~l~aaD~l~~~r~~ik~vA~~~Gl~A--TFmp----K----P~~~~-------------- 638 (698)
.+..|..-.|.|+..++.. .-++.+.+-..+.++.+.+. |... .=|| . |+...
T Consensus 56 ~IttDfsEsqlE~iTpv~~s~~eal~~L~~l~~~v~~~l~--~e~Lwp~SmP~~l~~~~~IpiA~yg~s~~g~~k~~Yr~ 133 (518)
T 1va6_A 56 WITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMG--DERMWPLSMPSYIAEGQDIELAQYGTSNTGRFKTLYRE 133 (518)
T ss_dssp SEEECSBTTEEEEECCCBSCHHHHHHHHHHHHHHHHTSST--TCEECCSSSCSSCCTTCCCCBCCCCSSHHHHHHHHHHH
T ss_pred CcCCCcchhheeecCCCCCCHHHHHHHHHHHHHHHHHHcC--CCeEeecCCCCCCCCCCCCccccccccccCccchHHHH
Confidence 4778999999999999965 55678888888888877773 3322 1111 1 22210
Q ss_pred -----------CCcccccccccccCC-ccccccCC-CCCCCCCcHHHHHHHHHHHHHHHHhhhhhcCCC
Q 005411 639 -----------IGSGSHVHLSLWQNG-ENVFMASD-SSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (698)
Q Consensus 639 -----------~GsG~H~H~Sl~~~g-~n~f~~~d-~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~ 694 (698)
.=+|+|+|+|+-+.= ..++...+ .+...-.|...-.-+-+++.+.+-|++++..+|
T Consensus 134 ~L~~rYG~~~q~IsGiH~N~s~~d~l~~~l~~~~~~~~~~~~~~~~y~~lirn~~r~~wlL~yLfgASP 202 (518)
T 1va6_A 134 GLKNRYGALMQTISGVHYNFSLPMAFWQAKSGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASP 202 (518)
T ss_dssp HHHHHHCHHHHTCCEEEEEEECCHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHCCBS
T ss_pred HHHHHhCcchheeeeEEEEEecCHHHHHHHHhhccchhHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 127999999994320 00000000 000001122333445589999999999998887
No 91
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=45.19 E-value=62 Score=34.66 Aligned_cols=152 Identities=13% Similarity=0.079 Sum_probs=72.7
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCC----CCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeee
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G~~~~----~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~ 290 (698)
.+..+++.|.++|+++.+|........ +.....| ++.+.+. ...+.+.++.|+.+.-..++..++.. ++++
T Consensus 241 ~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~--g~~v 315 (479)
T 3h4u_A 241 LMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTP--AEYAEDL-GWVGHDVWHAHCVQLDDAGIGLFART--GTGV 315 (479)
T ss_dssp HHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CH--HHHHHHT-TCCSTTEEEEECTTCCHHHHHHHHHH--TCEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCeEEEEecCCCHHHHHHHHHc--CCeE
Confidence 345567888999999999996531100 0001112 2222222 34456788999966544555555544 3333
Q ss_pred ecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCc-cchhhhHHHHHHHHHHHHHhhh-hcCCCChhHHHHHHHH
Q 005411 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ETYFLGAKRAREVVFSVLRDTC-IDEDLSVGEAIEVAKD 368 (698)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-~~~~~~~~~~R~~l~~vl~~~v-~~g~l~~~ea~~~~~~ 368 (698)
......+.....+. .-++++++.+ -++.+|||+.... .... ...++... .+.... ....++..+ +-+
T Consensus 316 ~~~p~s~~~l~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~l~~~~----al~ 384 (479)
T 3h4u_A 316 AHCPCSNMRLASGI-APVKKMRLAG--VPVGLGVDGSASNDGAQM--VAEVRQAL--LLQRVGFGPDAMTARE----ALE 384 (479)
T ss_dssp EECHHHHHHTTCCC-CCHHHHHHTT--CCEEECCCCTTSSCCCCH--HHHHHHHH--HHHHHHHCTTSCCHHH----HHH
T ss_pred EEChhHhhhcCCCC-CCHHHHHHCC--CeEEEeCCCCccCCCcCH--HHHHHHHH--HHhcccCCCCCCCHHH----HHH
Confidence 22111100000000 1245555544 3788999975432 1111 11222211 111111 122366543 445
Q ss_pred HHHHHHHHHhcCCC
Q 005411 369 IFALNAAQFYKINL 382 (698)
Q Consensus 369 Il~~NA~rly~l~~ 382 (698)
..-.|++++++++.
T Consensus 385 ~~T~~~A~~lg~~~ 398 (479)
T 3h4u_A 385 IATLGGAKVLNRDD 398 (479)
T ss_dssp HTTHHHHHHHTCSS
T ss_pred HHHHHHHHHhCCCC
Confidence 56688899999864
No 92
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=44.85 E-value=94 Score=33.41 Aligned_cols=112 Identities=12% Similarity=0.026 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHhhC-CCcEEEecCCCCCCCCC---CCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCee
Q 005411 213 DYIFISSLEVAQFL-DLPLQIHTGFGDKDLDL---RLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (698)
Q Consensus 213 d~~~~~~~e~a~e~-glpvq~H~G~G~~~~~~---~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnV 288 (698)
+-.+..+++.+.++ |+++.+|+......... .+..+.....+++.-...+.+.++.|+.+-...++..++.. ++
T Consensus 213 ~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~--g~ 290 (475)
T 2ood_A 213 PELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKK--GA 290 (475)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHhCCCCcEEEeeCCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHc--CC
Confidence 34455667888999 99999999642110000 00000111122331112355788899865443343334333 34
Q ss_pred eeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCC
Q 005411 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAY 327 (698)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~ 327 (698)
.+......+..-..+ ..-++++++.+..-|+.+|||+.
T Consensus 291 ~~~~~P~~~~~l~~~-~~~~~~~~~~Gv~~~~~lgTD~~ 328 (475)
T 2ood_A 291 AVVFCPCSNLFLGSG-LFRLGRATDPEHRVKMSFGTDVG 328 (475)
T ss_dssp EEEECHHHHHHTTCC-CCCHHHHTCTTSCCEEEECCCBT
T ss_pred EEEEChhhhhhcccC-cCCHHHHHhCCCCCcEEEEccCC
Confidence 332211000000000 01245555555434588999964
No 93
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=44.81 E-value=86 Score=33.56 Aligned_cols=24 Identities=25% Similarity=0.324 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCC
Q 005411 213 DYIFISSLEVAQFLDLPLQIHTGF 236 (698)
Q Consensus 213 d~~~~~~~e~a~e~glpvq~H~G~ 236 (698)
+..+..+++.|.++|+|+.+|...
T Consensus 205 ~e~l~~~~~~A~~~g~~v~~H~~~ 228 (467)
T 1xrt_A 205 SSVMRKALELASQLGVPIMDHCED 228 (467)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCCG
T ss_pred HHHHHHHHHHHHhcCCEEEEECCC
Confidence 344556678889999999999964
No 94
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=43.75 E-value=2.5e+02 Score=27.73 Aligned_cols=101 Identities=14% Similarity=0.001 Sum_probs=47.4
Q ss_pred CcEEEEecCC-CcchH---HH-HHHHHhCCeeeeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhh
Q 005411 262 KCRFVLLHAS-YPFSK---EA-SYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG 336 (698)
Q Consensus 262 ~~~~vllH~g-~p~~~---e~-~~la~~~pnVy~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~ 336 (698)
+..-|++|+. |++.. +. ..++..---+.+..+....... .......+.+++.+ -.+..|||++. |+.--..
T Consensus 129 g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~~iEiN~~s~~g~~g-~~~~~~~~~~~~~g--l~~~igSDaH~-~~~r~~~ 204 (262)
T 3qy7_A 129 GYIPVIAHPERNREIRENPSLLYHLVEKGAASQITSGSLAGIFG-KQLKAFSLRLVEAN--LIHFVASDAHN-VKTRNFH 204 (262)
T ss_dssp TCEEEEECGGGCHHHHHCTHHHHHHHHTTCEEEEEHHHHHTTTC-HHHHHHHHHHHHTT--CCCEEECCBCS-SSSSCCC
T ss_pred CCcEEEECCCccccccccHHHHHHHHHCCCEEEEECCccCcccc-hHHHHHHHHHHhCC--CeEEEEccCCC-CCCCCch
Confidence 4567899985 33321 22 2333222224444443322111 12344566666633 24568999885 3321112
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcC
Q 005411 337 AKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (698)
Q Consensus 337 ~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l 380 (698)
-....+.+.+-+ .. +.+++ ++.|++++++=
T Consensus 205 ~~~a~~~l~~~~---------G~----~~a~~-~~~n~~~il~~ 234 (262)
T 3qy7_A 205 TQEALYVLEKEF---------GS----ELPYM-LTENAELLLRN 234 (262)
T ss_dssp HHHHHHHHHHHH---------CS----HHHHH-HHHHHHHHHTT
T ss_pred HHHHHHHHHHHh---------CH----HHHHH-HHHHHHHHHCC
Confidence 222222222111 11 34555 88999999973
No 95
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=43.40 E-value=15 Score=29.96 Aligned_cols=67 Identities=9% Similarity=0.184 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHHhCCCceeeeecCCCCCceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCeeeeccc
Q 005411 565 SPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPK 633 (698)
Q Consensus 565 ~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpK 633 (698)
.-++.+|...+.+.|+.|..++.....|.|.+.+.-.-+ ..+.+-..+.-+++++.++|+..++.|.
T Consensus 16 pGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~~~~l~~l~~~L~~~~~~~~~~~~~~~~ 82 (91)
T 1zpv_A 16 SGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--EKQDFTYLRNEFEAFGQTLNVKINIQSA 82 (91)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SCCCHHHHHHHHHHHHHHHTEEEEEEEG
T ss_pred CCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--CCCCHHHHHHHHHHHHHHcCCEEEEeeH
Confidence 357899999999999999988877656777666543111 1123445677788999999999888654
No 96
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=39.77 E-value=1.8e+02 Score=30.49 Aligned_cols=34 Identities=12% Similarity=0.040 Sum_probs=23.4
Q ss_pred HHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhcCCC
Q 005411 345 FSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (698)
Q Consensus 345 ~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~l~~ 382 (698)
..++...++.+.++..+ +-+.+-.|++++++++.
T Consensus 345 ~~~~~~~~~~~~ls~~~----al~~~T~~pA~~lgl~~ 378 (458)
T 1gkp_A 345 NLLYTYGVSRGRLDIHR----FVDAASTKAAKLFGLFP 378 (458)
T ss_dssp HHHHHHHTTSSSCCHHH----HHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHcCCCCHHH----HHHHHhhCHHHHhCCCC
Confidence 34455566677788754 44556788899999953
No 97
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=37.27 E-value=55 Score=31.47 Aligned_cols=108 Identities=13% Similarity=0.087 Sum_probs=54.9
Q ss_pred hHHHHhhcCCCCcEEEEecCCCc-----chHHHHHHHHhCCeeeeecccccC----cccHHHHHH---HHHHHHhhCCCC
Q 005411 251 LRAILEDKRFSKCRFVLLHASYP-----FSKEASYLAYVYPQVYLDFGLAIP----KLSVQGMIS---SIKELLELAPTK 318 (698)
Q Consensus 251 L~~l~~~~~~P~~~~vllH~g~p-----~~~e~~~la~~~pnVy~d~s~~~~----~~~~~g~~~---~l~~~le~~~~~ 318 (698)
....++ . ++. |+.|++.+ +..+.+..|..+ ||.+++...-. ..++.+... .+.++....+ -
T Consensus 89 n~~a~~--~--~vD-II~Hp~~~~~~~~~~~~~a~~A~e~-gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g-~ 161 (212)
T 1v77_A 89 IRYSIE--K--GVD-AIISPWVNRKDPGIDHVLAKLMVKK-NVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYK-V 161 (212)
T ss_dssp HHHHHH--T--TCS-EEECTTTTSSSCSCCHHHHHHHHHH-TCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred HHHHHh--C--CCC-EEecccccccCCCCCHHHHHHHHHC-CeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcC-C
Confidence 444555 2 454 45588644 223455555444 89998865321 001222222 2233334445 3
Q ss_pred cEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHHHHhc
Q 005411 319 KVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (698)
Q Consensus 319 kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~NA~rly~ 379 (698)
+|+.|||++. |.. .-...... +++.++ .++. +.+...+..|+++++.
T Consensus 162 ~ivisSDAh~-~~~-v~~~~~~~----~l~~~~----G~~~----e~~~~~l~~~~~~i~~ 208 (212)
T 1v77_A 162 RRFLTSSAQE-KWD-VRYPRDLI----SLGVVI----GMEI----PQAKASISMYPEIILK 208 (212)
T ss_dssp CEEEECCCSS-GGG-CCCHHHHH----HHHHHT----TCCH----HHHHHTTTHHHHHHHC
T ss_pred CEEEeCCCCC-hhh-cCCHHHHH----HHHHHc----CCCH----HHHHHHHHHHHHHHHH
Confidence 7999999984 432 11222222 222221 3443 5677888888888875
No 98
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=36.06 E-value=42 Score=37.11 Aligned_cols=143 Identities=13% Similarity=0.035 Sum_probs=88.0
Q ss_pred ceeeeeeeeEEEEEeecccCCCCCceeCCCCCcccCccccCchHHHHHHHHHHHhCCCceeeeecCCCCCceEEecCcCc
Q 005411 523 LVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTV 602 (698)
Q Consensus 523 ~~~~~g~E~EF~l~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~GI~ve~~h~E~gpgQ~Ei~l~p~~ 602 (698)
..+.+|+|-|+..+++ +|.-...|++. ... .. ..-..+..|..-.|.|+..++..
T Consensus 31 ~~~~~GIE~E~lRVd~---~G~La~tphP~--~LG-----s~---------------lthp~IttDfsEsqlE~iTp~~~ 85 (525)
T 3nzt_A 31 INNLRGIERETLRVTD---CGNLATSNHPD--GLG-----HK---------------LTNNSITVDFSENLLELITKPHD 85 (525)
T ss_dssp CCCEEEEEEEEEEEET---TSCBCCSCSCG--GGC-----CT---------------TTCSSEEESSBTTEEEEECCCBS
T ss_pred CCCCcceEeeeeEECC---CCCcCCCCChH--hhc-----cC---------------ccCCCCCchhhhhHhhhcCCCCC
Confidence 4688999999999876 33211112110 000 00 01145677888899999999976
Q ss_pred -hHHHHHHHHHHHHHHHHHH-HHcCCeeeeccccCCC--C----C--------------------------Ccccccccc
Q 005411 603 -AAKAADNLIFTREVLRAVA-RKHGLLATFVPKFALD--D----I--------------------------GSGSHVHLS 648 (698)
Q Consensus 603 -~l~aaD~l~~~r~~ik~vA-~~~Gl~ATFmpKP~~~--~----~--------------------------GsG~H~H~S 648 (698)
.-++-+.+-..+.++.+.+ ....+-+.=||-|..+ . - =+|.|+|+|
T Consensus 86 s~~ea~~~L~~l~~~v~~~l~~~E~LWp~SmPl~~~~~~ipiA~yg~sn~g~~k~~YR~gL~~rYG~~~q~IsGiH~Nfs 165 (525)
T 3nzt_A 86 SIDKAIGELYQLSAFTLDNMHSDEIILNTSMPLSANDNDIQEADFGSSNSGRMKRVYRKGLSARYGKIMQIISGIHYNFS 165 (525)
T ss_dssp SHHHHHHHHHHHHHHHHHHSCTTEEECCSSSCCSCCGGGCCBCCCCSSHHHHHHHHHHHHHHHHHCSGGGGCCBEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCeEEeecCCCCCCcCCCceeeccccccCcchHHHHHHHHHHhchhheeeeeEEEEec
Confidence 6678888888888888876 6666766668632211 0 1 169999999
Q ss_pred cccCCcc-ccccCCCCCCCCCcHHHHHHHHHHHHHHHHhhhhhcCCC
Q 005411 649 LWQNGEN-VFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVP 694 (698)
Q Consensus 649 l~~~g~n-~f~~~d~~~~~~lS~~~~~fiaGlL~h~~al~a~~~Pt~ 694 (698)
+-+.--. ++..... .-|...-.-+-+.+.+.+=|+.++..+|
T Consensus 166 l~~~~~~~l~~~~~~----~~s~~Y~~Lirnf~Ry~Wll~YLfGASP 208 (525)
T 3nzt_A 166 FDKDLISNIATNKQV----SISDIYFDVLNNYFEFMWLLPYLFGASP 208 (525)
T ss_dssp CCHHHHHHHHHHHTC----CHHHHHHHHHHHHHHHTTHHHHHHCCBC
T ss_pred CCHHHHHHHHHhccc----chhHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 9432111 1100000 1355555667788888888888876654
No 99
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=33.01 E-value=1.3e+02 Score=32.19 Aligned_cols=106 Identities=15% Similarity=0.062 Sum_probs=49.0
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCCC---C-CCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCee
Q 005411 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR---L-SNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (698)
Q Consensus 213 d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~---~-~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnV 288 (698)
+-.+..+++.|.++|+++.+|....+...... + ..+ +..+.+. ...+-+.++.|+.+-...++..++.. ++
T Consensus 228 ~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~i~~l~~~--gv 302 (492)
T 2paj_A 228 PREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSP--VAFCGEH-DWLGSDVWYAHLVKVDADEIALLAQT--GT 302 (492)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECC-------------CCCH--HHHHHHT-TCCSTTEEEESCCSCCHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCH--HHHHHHC-CCCCCCcEEEEEecCCHHHHHHHHHc--CC
Confidence 34455667888999999999997532211110 0 112 2222221 23344678899865444444444432 35
Q ss_pred eeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCC
Q 005411 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDA 326 (698)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~ 326 (698)
++.+....+..-..++ .-++.+++.+ -++.+|||+
T Consensus 303 ~v~~~p~~~~~l~~~~-~p~~~~~~~G--v~v~lgTD~ 337 (492)
T 2paj_A 303 GVAHCPQSNGRLGSGI-CPVREMADAG--VPVSIGVDG 337 (492)
T ss_dssp EEEECHHHHHCC------CCTTHHHHT--CCEEECCCH
T ss_pred EEEECchhhcccCCCC-CCHHHHHHCC--CcEEEeCCC
Confidence 5443211000000010 1233445544 368899995
No 100
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=31.45 E-value=2.1e+02 Score=26.55 Aligned_cols=67 Identities=18% Similarity=0.207 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHhCCCceeeeecCC--------CCCceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCeeeeccc
Q 005411 565 SPVFQEVLADLHSLNISVEQLHAEA--------GKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPK 633 (698)
Q Consensus 565 ~~~~~~i~~~l~~~GI~ve~~h~E~--------gpgQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpK 633 (698)
-.++.+|.+.|.+.|+.|+.+..-. +.+.|-+.+.-.-+ ... +.-.+|..+..+|.+.|+...+.+-
T Consensus 104 ~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~-~~~~l~~~l~~~~~~~~~~~~~~~~ 178 (192)
T 1u8s_A 104 LGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGC-NLMQLQEEFDALCTALDVQGSLNFI 178 (192)
T ss_dssp TTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTS-CHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred ccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCC-CHHHHHHHHHHHHHHhCceEEEEEc
Confidence 3589999999999999998876653 34566555443211 111 3445788888999999999999873
No 101
>3ig5_A Glutamate-cysteine ligase; glutathione, ATP-grAsp, ATP-binding, glutathione biosynthesis, nucleotide-binding, phosphoprotein; HET: GLU PGE; 2.10A {Saccharomyces cerevisiae} PDB: 3ig8_A* 3lvv_A* 3lvw_A*
Probab=30.52 E-value=84 Score=35.60 Aligned_cols=96 Identities=14% Similarity=0.040 Sum_probs=56.2
Q ss_pred HHHHHHHhcCceeeeeeeeEEEEEeecccCCCCCceeCCCCCcccCccccCchHHHHHHHHH-HHhCCCceeeeecCCCC
Q 005411 513 VSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLAD-LHSLNISVEQLHAEAGK 591 (698)
Q Consensus 513 ~~~~l~~~~G~~~~~g~E~EF~l~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~-l~~~GI~ve~~h~E~gp 591 (698)
+-+++++..|..++.|-|+|++|++-...+ ...++.- ...++++++.+. +....-..-.+|+|+|-
T Consensus 33 i~~~~k~r~~d~l~WGDEIEy~LV~~d~~~--k~arlsl-----------~~~eIL~~L~~~~~~~~~~~~p~~~PEyGr 99 (692)
T 3ig5_A 33 IFQAAGKRDNDPLFWGDELEYMVVDFDDKE--RNSMLDV-----------CHDKILTELNMEDSSLCEANDVSFHPEYGR 99 (692)
T ss_dssp HHHHHTTCCCCCCEEEEEEEEEEEEEETTT--TEEEECC-----------SCTTHHHHTTTTTHHHHHHTTEEEECCSBT
T ss_pred HHHHhcccCCCcccccceeEEEEEEecCCC--ceeeecc-----------cHHHHHHHHhhhhhhcccCCCCcccchhhc
Confidence 344455557889999999999999862111 1122211 112333333220 11111244689999997
Q ss_pred CceEEecCcCchH------HHHHHHHHHHHHHHHHHHH
Q 005411 592 GQFEIALGHTVAA------KAADNLIFTREVLRAVARK 623 (698)
Q Consensus 592 gQ~Ei~l~p~~~l------~aaD~l~~~r~~ik~vA~~ 623 (698)
=..|. .|..|. .-=.++..-|..+++.+..
T Consensus 100 yMlE~--TP~~Py~g~~~~~VE~nMr~RR~~a~~~l~~ 135 (692)
T 3ig5_A 100 YMLEA--TPASPYLNYVGSYVEVNMQKRRAIAEYKLSE 135 (692)
T ss_dssp TEEEE--EESSCEESCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred eeecc--CCCCCCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 77777 443332 3346677888888888887
No 102
>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1
Probab=29.23 E-value=1.1e+02 Score=26.95 Aligned_cols=69 Identities=16% Similarity=0.197 Sum_probs=47.5
Q ss_pred CccccCchHHHHHHHHHHHhCCCceee--------eecCC---CCCceEEecCcCchHH--------HHHHHHHHHHHHH
Q 005411 558 TAAYDAVSPVFQEVLADLHSLNISVEQ--------LHAEA---GKGQFEIALGHTVAAK--------AADNLIFTREVLR 618 (698)
Q Consensus 558 ~~~~~~~~~~~~~i~~~l~~~GI~ve~--------~h~E~---gpgQ~Ei~l~p~~~l~--------aaD~l~~~r~~ik 618 (698)
+++......++.||.+.|.+.||+.++ .|... ..=||||.+--.+.+. ..-+.+.+|.++.
T Consensus 33 tTSsk~P~eIm~EI~rvL~~~~i~~k~~~~y~L~C~~~~~~~~~~vkfEiEVcKvp~l~l~GI~fKRisGd~w~YK~lc~ 112 (126)
T 1v5s_A 33 QGSSGSSGDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIAS 112 (126)
T ss_dssp CCCCSSHHHHHHHHHHHHHHTTEEEEEEETTEEEEEECSSSTTTCEEEEEECCCCTTTCSCCCEEEEEESCHHHHHHHHH
T ss_pred eecCCCHHHHHHHHHHHHHHcCCcEEEECCEEEEEEECCCCCCceEEEEEEEEEecCCCceeEEEeeccCchhHHHHHHH
Confidence 334455689999999999999999987 13211 1348999976432110 0113489999999
Q ss_pred HHHHHcCC
Q 005411 619 AVARKHGL 626 (698)
Q Consensus 619 ~vA~~~Gl 626 (698)
+|..+..+
T Consensus 113 ~IL~eLkL 120 (126)
T 1v5s_A 113 KIANELKL 120 (126)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHhc
Confidence 99998775
No 103
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=28.83 E-value=70 Score=27.95 Aligned_cols=69 Identities=16% Similarity=0.123 Sum_probs=45.3
Q ss_pred CccccCchHHHHHHHHHHHhCCCceeeeec-------C----CCCCceEEecCcCchHH--------HHHHHHHHHHHHH
Q 005411 558 TAAYDAVSPVFQEVLADLHSLNISVEQLHA-------E----AGKGQFEIALGHTVAAK--------AADNLIFTREVLR 618 (698)
Q Consensus 558 ~~~~~~~~~~~~~i~~~l~~~GI~ve~~h~-------E----~gpgQ~Ei~l~p~~~l~--------aaD~l~~~r~~ik 618 (698)
+++.....+++.+|.+.|.++||.+++-.. + .+.-|||+.+--.+.+. ..=+.+.||.++.
T Consensus 33 tTS~~~P~eIm~eI~rvL~~~gi~~~~~g~y~l~C~~~~~~~~~~v~fElEVckl~~~~l~gV~~kRi~Gd~~~yk~lc~ 112 (120)
T 3ose_A 33 TTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIAS 112 (120)
T ss_dssp CEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCTTTTCCEEEEEEEEEEGGGTEEEEEEEEEESCHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHCCCEEEEcCCEEEEEEecCCCCCccEEEEEEEEEecCCCceeEEEEecCCCHHHHHHHHH
Confidence 334456789999999999999999987442 1 12357888764432110 1114467888888
Q ss_pred HHHHHcCC
Q 005411 619 AVARKHGL 626 (698)
Q Consensus 619 ~vA~~~Gl 626 (698)
+|..+..|
T Consensus 113 ~il~~L~L 120 (120)
T 3ose_A 113 KIANELKL 120 (120)
T ss_dssp HHHHHCCC
T ss_pred HHHHHhcC
Confidence 88876543
No 104
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=28.69 E-value=1.2e+02 Score=31.63 Aligned_cols=196 Identities=18% Similarity=0.135 Sum_probs=96.5
Q ss_pred cHHHHHHHHHHHHHhhccc-ccceeeeeccccCCCCCCCCCHHHHHHHHHHHHhcC---CCCccC--chhhhhHHHHHHH
Q 005411 147 TLDVFIETFLKQLRSAANK-IVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG---KPVRIT--NKSLIDYIFISSL 220 (698)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~-~vgfksi~~y~~gl~~~~~~~~~ea~~~~~~~l~~~---~~~~~~--~~~l~d~~~~~~~ 220 (698)
+++++++++.+.++.+... -+..+.|.|..+.+ +++++.+.++.++.-. .+..+. ........+..++
T Consensus 113 ~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~------~~~~a~~~l~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~ 186 (343)
T 3rys_A 113 ALETCVNGVANALATSEEDFGVSTLLIAAFLRDM------SEDSALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLY 186 (343)
T ss_dssp CHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETTS------CHHHHHHHHHHHHHTTCCCCEEEEESCCTTCCGGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCCC------CHHHHHHHHHHHHhCCCCEEEEecCCcccCCCHHHHHHHH
Confidence 4667777777666654311 13567777775443 3566666655554311 011111 0111122356778
Q ss_pred HHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcc--hHHHHHHHHhC------C--eeee
Q 005411 221 EVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF--SKEASYLAYVY------P--QVYL 290 (698)
Q Consensus 221 e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~--~~e~~~la~~~------p--nVy~ 290 (698)
+.|.+.|+++.+|.|-.. .|..+.+.+.. -.++ + +.|+-.-. -..+..++..- | |+++
T Consensus 187 ~~A~~~gl~~~~HagE~~--------~~~~i~~al~~-lg~~-r--IgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l 254 (343)
T 3rys_A 187 QRAAEAGLRRIAHAGEEG--------PASYITEALDV-LHVE-R--IDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRL 254 (343)
T ss_dssp HHHHHTTCEEEEEESSSS--------CHHHHHHHHHT-SCCS-E--EEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHT
T ss_pred HHHHHCCCeEEEeeCCCC--------CHHHHHHHHhc-CCcc-e--eeeeeeecCChHHHHHHHhcCCCeeEchhHHHHh
Confidence 999999999999998642 34445444431 1122 2 57873211 12333444332 1 4544
Q ss_pred ecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHH
Q 005411 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIF 370 (698)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il 370 (698)
.. ++... ..-++++++.+ =++..+||.+.+-.. .+..++ +.+. . .+ .++.++ ...+
T Consensus 255 ~~---~~~~~----~hPi~~ll~~G--v~V~l~TDdp~~~~~-~l~~E~-~~a~-~---~~----~l~~~~----l~~l- 310 (343)
T 3rys_A 255 RA---VDKLA----DHPLPEMLAIG--LNVCVNSDDPAYFGG-YVDDNF-EQLV-K---VL----EFSVPE----QATL- 310 (343)
T ss_dssp TS---SSCGG----GCSHHHHHHTT--CCEEECCBSTTTTTC-CHHHHH-HHHH-H---HH----CCCHHH----HHHH-
T ss_pred CC---CCCcc----cchHHHHHHCC--CeEEEeCCCccccCC-CHHHHH-HHHH-H---Hc----CCCHHH----HHHH-
Confidence 33 11110 01255556644 478899997665443 222222 1111 1 11 366543 3333
Q ss_pred HHHHHHHhcCCCCc
Q 005411 371 ALNAAQFYKINLGV 384 (698)
Q Consensus 371 ~~NA~rly~l~~~~ 384 (698)
-.|+.+.=.++.+.
T Consensus 311 ~~nsi~~sf~~~~~ 324 (343)
T 3rys_A 311 AANSIRSSFASDAR 324 (343)
T ss_dssp HHHHHHHSSSCHHH
T ss_pred HHHHHHHHCCCHHH
Confidence 47777766665443
No 105
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=28.54 E-value=1.5e+02 Score=31.20 Aligned_cols=153 Identities=20% Similarity=0.078 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCCCCCCC----CCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCee
Q 005411 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDL----RLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (698)
Q Consensus 213 d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~----~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnV 288 (698)
+-.+..+++.|.++|+++.+|.+-.... .. ....| ++.+.+. ..-+-+.++.|+.+--..+...++..- +
T Consensus 218 ~~~l~~~~~~a~~~g~~v~~H~~e~~~~-~~~~~~~~~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~g--~ 291 (456)
T 3ls9_A 218 PELFEAFAQMAADYDVRLHTHFYEPLDA-GMSDHLYGMTP--WRFLEKH-GWASDRVWLAHAVVPPREEIPEFADAG--V 291 (456)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCTTHH-HHHHHHHSSCH--HHHHHHT-TCSSTTEEEEECCSCCGGGHHHHHHHT--C
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCchH-HHHHHHhCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHcC--C
Confidence 3445566888999999999999643210 00 00011 2222221 233556788898654444444555432 2
Q ss_pred eeecccccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCCC-ccchhhhHHHHHHHHHHHHHhhhhcC----CCChhHHH
Q 005411 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PETYFLGAKRAREVVFSVLRDTCIDE----DLSVGEAI 363 (698)
Q Consensus 289 y~d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-P~~~~~~~~~~R~~l~~vl~~~v~~g----~l~~~ea~ 363 (698)
.+......+.....++ .-++++++.+ -++.+|||+... +... ....++..+ .+....... .++..+
T Consensus 292 ~~~~~p~s~~~l~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 362 (456)
T 3ls9_A 292 AIAHLIAPDLRMGWGL-APIREYLDAG--ITVGFGTTGSASNDGGN--LLGDLRLAA--LAHRPADPNEPEKWLSARE-- 362 (456)
T ss_dssp EEEECHHHHHHTTCCC-CCHHHHHHTT--CEEEECCCCTTSSCCCC--HHHHHHHHH--HHTGGGSTTCGGGSCCHHH--
T ss_pred EEEEChhHHhhcCCCc-chHHHHHHCC--CcEEEECCCCccCCCCC--HHHHHHHHH--HHhccccccccccCCCHHH--
Confidence 2221110000000000 0244555543 378899996532 1111 111222221 111111111 466543
Q ss_pred HHHHHHHHHHHHHHhcCCC
Q 005411 364 EVAKDIFALNAAQFYKINL 382 (698)
Q Consensus 364 ~~~~~Il~~NA~rly~l~~ 382 (698)
+=+..-.|+++.++++.
T Consensus 363 --al~~~T~~~A~~lg~~~ 379 (456)
T 3ls9_A 363 --LLRMATRGSAECLGRPD 379 (456)
T ss_dssp --HHHHTTHHHHHHTTCTT
T ss_pred --HHHHHHHHHHHHhCCCC
Confidence 34445578889999864
No 106
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=27.26 E-value=1.5e+02 Score=30.74 Aligned_cols=139 Identities=14% Similarity=0.004 Sum_probs=64.4
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeeeccc
Q 005411 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGL 294 (698)
Q Consensus 215 ~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d~s~ 294 (698)
.+..+++.+.++|+++.+|+.... .. . .+....+ +.. ..+.|+.+-...++..++.. ++.+....
T Consensus 224 ~~~~~~~~a~~~g~~v~~H~~~~~-~~-----~--~~~~~~~---~g~--~~~~H~~~~~~~~~~~~~~~--g~~~~~~p 288 (416)
T 2q09_A 224 QTEQVYLAADQYGLAVKGHMDQLS-NL-----G--GSTLAAN---FGA--LSVDHLEYLDPEGIQALAHR--GVVATLLP 288 (416)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSSC-CC-----S--HHHHHHH---TTC--SEEEECTTCCHHHHHHHHHH--TCEEEECH
T ss_pred HHHHHHHHHHHCCCcEEEEECCCC-ch-----H--HHHHHHH---cCC--CEEeecccCCHHHHHHHHHc--CCeEEEcC
Confidence 345567888899999999986321 00 1 1233333 221 13567754333333333322 23332211
Q ss_pred ccCcccHHHHHHHHHHHHhhCCCCcEEEecCCCC--CccchhhhHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHH
Q 005411 295 AIPKLSVQGMISSIKELLELAPTKKVMFSTDAYA--SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFAL 372 (698)
Q Consensus 295 ~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~--~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~ea~~~~~~Il~~ 372 (698)
..+..........++.+++.+ -++.+|||+.. .|... -...++ ..+....++..+ +-+.+-.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~G--v~~~~gtD~~~~~~~~~~--~~~~~~--------~~~~~~~l~~~~----al~~~T~ 352 (416)
T 2q09_A 289 TAFYFLKETKLPPVVALRKAG--VPMAVSSDINPGTAPIVS--LRMAMN--------MACTLFGLTPVE----AMAGVTR 352 (416)
T ss_dssp HHHHHTTCCCCCCHHHHHHTT--CCEEECCCCBTTTBCCCC--HHHHHH--------HHHHHHCCCHHH----HHHHTTH
T ss_pred ccHHhhccccccCHHHHHHCC--CeEEEecCCCCccCCCCC--HHHHHH--------HHHHHcCCCHHH----HHHHHHH
Confidence 000000000001234555544 36889999643 22111 111111 122223577654 4456678
Q ss_pred HHHHHhcCCCCc
Q 005411 373 NAAQFYKINLGV 384 (698)
Q Consensus 373 NA~rly~l~~~~ 384 (698)
|++++++++...
T Consensus 353 ~~A~~lg~~~~~ 364 (416)
T 2q09_A 353 HAARALGEQEQL 364 (416)
T ss_dssp HHHHHTTCTTTS
T ss_pred HHHHHhCCCccc
Confidence 899999997543
No 107
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=27.25 E-value=62 Score=33.86 Aligned_cols=76 Identities=17% Similarity=0.210 Sum_probs=45.1
Q ss_pred CchhhhhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecC--CCcchH------HH
Q 005411 207 TNKSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHA--SYPFSK------EA 278 (698)
Q Consensus 207 ~~~~l~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~--g~p~~~------e~ 278 (698)
....+.++ |+++.+++.|+||.+=+|... ...-..--+.+.. . +-+|+++|| +||..+ .+
T Consensus 118 ~S~~~~N~---pLL~~va~~gKPviLstGmst------l~Ei~~Ave~i~~--~-g~~viLlhC~s~YPt~~~~~nL~aI 185 (350)
T 3g8r_A 118 ASCSFTDW---PLLERIARSDKPVVASTAGAR------REDIDKVVSFMLH--R-GKDLTIMHCVAEYPTPDDHLHLARI 185 (350)
T ss_dssp CSSSTTCH---HHHHHHHTSCSCEEEECTTCC------HHHHHHHHHHHHT--T-TCCEEEEECCCCSSCCGGGCCTTHH
T ss_pred CcccccCH---HHHHHHHhhCCcEEEECCCCC------HHHHHHHHHHHHH--c-CCCEEEEecCCCCCCCcccCCHHHH
Confidence 33444443 457778899999999999741 0000011122332 2 227999998 677433 34
Q ss_pred HHHHHhCCeeeeeccc
Q 005411 279 SYLAYVYPQVYLDFGL 294 (698)
Q Consensus 279 ~~la~~~pnVy~d~s~ 294 (698)
..|...||++=++.|.
T Consensus 186 ~~Lk~~fp~lpVG~Sd 201 (350)
T 3g8r_A 186 KTLRQQYAGVRIGYST 201 (350)
T ss_dssp HHHHHHCTTSEEEEEE
T ss_pred HHHHHHCCCCCEEcCC
Confidence 5677789887776653
No 108
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=26.07 E-value=57 Score=35.42 Aligned_cols=56 Identities=13% Similarity=-0.045 Sum_probs=32.2
Q ss_pred cEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhh-cCCCChhHHHHHHHHHHHHHHHHHhcCC
Q 005411 319 KVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI-DEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 319 kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~-~g~l~~~ea~~~~~~Il~~NA~rly~l~ 381 (698)
++++|||+.++......+. -..+...+..++. .+.++..+ +-+.+-.|++++|+++
T Consensus 373 ~~~iGTD~~~~~~~~~~~~---~~~~~~~l~~~v~~~~~l~~~~----~l~~~T~~~A~~lgl~ 429 (496)
T 1rk6_A 373 PTMIGSDGLPHDERPHPRL---WGTFPRVLGHYSRDLGLFPLET----AVWKMTGLTAAKFGLA 429 (496)
T ss_dssp TEEECCCCCTTCSSCCTHH---HHHHHHHHCCCCCCTCSSCHHH----HHHTTTHHHHHHHTCT
T ss_pred CEEEecCCCCCCCCCCchh---hccHHHHHHHHHhhcCCCCHHH----HHHHHHHHHHHHhCCC
Confidence 7899999753211101111 1123455555664 46688754 4445567888899995
No 109
>2fao_A Probable ATP-dependent DNA ligase; polymerase, primase, NHEJ, hydrolase/transferase complex; 1.50A {Pseudomonas aeruginosa} PDB: 2faq_A* 2far_A*
Probab=25.92 E-value=66 Score=33.04 Aligned_cols=71 Identities=23% Similarity=0.194 Sum_probs=51.3
Q ss_pred HHhCC-CceeeeecCCC----CCceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCeeeeccccCCCCCCccccccccc
Q 005411 575 LHSLN-ISVEQLHAEAG----KGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALDDIGSGSHVHLSL 649 (698)
Q Consensus 575 l~~~G-I~ve~~h~E~g----pgQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl 649 (698)
+.++| |++..+..-.+ |.+.-|.|.|.+++.-.+-+-.++. +|++-.+.||.+ | ||- .-|.|+||-+-|
T Consensus 111 ~aq~~~lE~H~w~~~~~~~~~PD~lvfDLDP~~~~~f~~v~~aA~~-~r~~L~~lGL~~-f-~KT---SGgkGlHV~vPl 184 (309)
T 2fao_A 111 AVQMGSIEFHTWNASLANLERPDRFVLDLDPDPALPWKRMLEATQL-SLTLLDELGLRA-F-LKT---SGGKGMHLLVPL 184 (309)
T ss_dssp HHHTTEEEEEECSSCTTCTTSCSEEEEEEEECTTSCHHHHHHHHHH-HHHHHHHHTCCC-E-EEE---CSSSSEEEEEEC
T ss_pred HHHhCcEEeeCCcccCCCCCCCCEEEEECCCCcCCCHHHHHHHHHH-HHHHHHHcCCce-e-eEc---cCCCeeEEEEEc
Confidence 55555 66666655443 8899999999987665555544544 899999999964 4 773 357999999999
Q ss_pred cc
Q 005411 650 WQ 651 (698)
Q Consensus 650 ~~ 651 (698)
..
T Consensus 185 ~~ 186 (309)
T 2fao_A 185 ER 186 (309)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 110
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=24.83 E-value=5.6e+02 Score=25.97 Aligned_cols=23 Identities=13% Similarity=0.056 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhhCCCcEEEecCC
Q 005411 214 YIFISSLEVAQFLDLPLQIHTGF 236 (698)
Q Consensus 214 ~~~~~~~e~a~e~glpvq~H~G~ 236 (698)
-.+..+++.|.++|+|+.+|...
T Consensus 198 ~~l~~~~~~A~~~g~~v~~H~~~ 220 (403)
T 2qt3_A 198 GSLDLCFKLAKEYDVDIDYHIHD 220 (403)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCeEEEeCC
Confidence 34556788899999999999964
No 111
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=23.89 E-value=3e+02 Score=30.24 Aligned_cols=145 Identities=21% Similarity=0.161 Sum_probs=71.0
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCCCCCCCCCCCccchHHHHhhcCCCCcEEEEecCCCcchHHHHHHHHhCCeeeee
Q 005411 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (698)
Q Consensus 212 ~d~~~~~~~e~a~e~glpvq~H~G~G~~~~~~~~~~p~~L~~l~~~~~~P~~~~vllH~g~p~~~e~~~la~~~pnVy~d 291 (698)
.+-.+..+++.|.++|++|.+|.- |+.. .-..|+.+.+. + .+..+.|+.+.-..++..++.. +|++.
T Consensus 327 ~~e~l~~~v~~A~~~G~~v~~Ha~-gd~a------i~~~l~a~~~~---~-~r~~ieH~~~~~~e~i~~la~~--gv~~~ 393 (534)
T 3icj_A 327 NKDEIVEVIERAKPLGLDVAVHAI-GDKA------VDVALDAFEEA---E-FSGRIEHASLVRDDQLERIKEL--KVRIS 393 (534)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEEEC-SHHH------HHHHHHHHHHH---T-CCCEEEECCBCCHHHHHHHHHH--TCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEc-ChHH------HHHHHHHHHhc---c-CCCEEEECCCCCHHHHHHHHHc--CCeEE
Confidence 344456678999999999999985 3211 01123333332 1 4677889865444444455533 33332
Q ss_pred cccccCc----c-cHHHHH-----HHHHHHHhhCCCCcEEEecCCCCCccchhhhHHHHHHHHHHHHHhhhhcCCCChhH
Q 005411 292 FGLAIPK----L-SVQGMI-----SSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE 361 (698)
Q Consensus 292 ~s~~~~~----~-~~~g~~-----~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~R~~l~~vl~~~v~~g~l~~~e 361 (698)
....+.. . ..-|.. .-++.+++. =++.+|||+...|...| ...+..+.+ ..+..+..++..+
T Consensus 394 ~~P~~~~~~~~~~~~lg~~r~~~~~p~~~l~~~---v~valGSD~p~~~~~p~---~~~~~av~r--~~~~~~~~ls~~e 465 (534)
T 3icj_A 394 AQPHFIVSDWWIVNRVGEERAKWAYRLKTLSSI---TKLGFSTDSPIEPADPW---VSIDAAVNR--YVVDPGERVSREE 465 (534)
T ss_dssp ECTTHHHHCTTHHHHHHHHHGGGBTCHHHHHHH---SCEEECCTTTTSCCCHH---HHHHHHHHC--CSSCGGGCCCHHH
T ss_pred EccccccchhHHHHhhCHHHHhccHHHHHHHHh---CCEEeecCCCCCCCCHH---HHHHHHHhc--cccCcccCCCHHH
Confidence 1111100 0 011110 125566665 46889999654432211 112222211 1122223456543
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q 005411 362 AIEVAKDIFALNAAQFYKIN 381 (698)
Q Consensus 362 a~~~~~~Il~~NA~rly~l~ 381 (698)
+=+..-.|+++.++++
T Consensus 466 ----aL~~~T~~~A~~lg~e 481 (534)
T 3icj_A 466 ----ALHLYTHGSAQVTLAE 481 (534)
T ss_dssp ----HHHHTTHHHHHHTTCT
T ss_pred ----HHHHHHHHHHHHhCCC
Confidence 3334456777888886
No 112
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=21.14 E-value=1.1e+02 Score=31.38 Aligned_cols=65 Identities=8% Similarity=0.053 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhCCCceeeeecCCCC--CceEEecCcCchHHHHHHHHHHHHHHHHHHHHcCCeeeeccccCCC
Q 005411 567 VFQEVLADLHSLNISVEQLHAEAGK--GQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPKFALD 637 (698)
Q Consensus 567 ~~~~i~~~l~~~GI~ve~~h~E~gp--gQ~Ei~l~p~~~l~aaD~l~~~r~~ik~vA~~~Gl~ATFmpKP~~~ 637 (698)
-+.+|++...+.||.+--+-++.=| ...|+.+... |.+...=.-|.++|+++|++.||+|=+|.-
T Consensus 61 ~l~~il~~n~~~~I~~yRiSS~l~P~~thp~~~~~~~------~~~~~~l~~iG~~a~~~~iRLS~HPgqF~v 127 (310)
T 3tc3_A 61 CLKNILEWNLKHEILFFRISSNTIPLASHPKFHVNWK------DKLSHILGDIGDFIKENSIRISMHPGQYVV 127 (310)
T ss_dssp HHHHHHHHHHHTTCCEEECCTTSSTTTTSTTCCCCHH------HHTHHHHHHHHHHHHHTTCEEEECCCTTCC
T ss_pred HHHHHHHHHHHcCCEEEEeCcccCCCccccccccchH------HHHHHHHHHHHHHHHHcCcEEEecCCCCcc
Confidence 3456888999999999988877766 2223322222 222222245788999999999999999854
Done!