Query 005415
Match_columns 697
No_of_seqs 458 out of 3012
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 23:05:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005415.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005415hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0696 Serine/threonine prote 100.0 1E-65 2.2E-70 536.7 14.7 394 201-644 148-574 (683)
2 KOG0667 Dual-specificity tyros 100.0 2.5E-48 5.4E-53 430.5 25.2 256 397-656 169-424 (586)
3 KOG0575 Polo-like serine/threo 100.0 4.4E-41 9.4E-46 369.4 23.7 246 413-689 17-272 (592)
4 KOG0615 Serine/threonine prote 100.0 6.7E-42 1.5E-46 360.2 15.0 257 412-693 170-444 (475)
5 KOG0593 Predicted protein kina 100.0 1.6E-41 3.4E-46 345.2 14.6 260 414-686 2-282 (396)
6 KOG0659 Cdk activating kinase 100.0 6.7E-41 1.5E-45 335.9 17.5 265 414-691 2-286 (318)
7 KOG1290 Serine/threonine prote 100.0 3.6E-40 7.8E-45 352.5 23.4 295 392-690 55-554 (590)
8 KOG0598 Ribosomal protein S6 k 100.0 1.4E-40 3.1E-45 347.9 19.8 254 413-696 24-291 (357)
9 KOG0581 Mitogen-activated prot 100.0 8.6E-41 1.9E-45 349.6 16.6 252 413-693 78-342 (364)
10 KOG0595 Serine/threonine-prote 100.0 2.6E-40 5.5E-45 348.7 19.9 211 413-635 9-229 (429)
11 KOG0661 MAPK related serine/th 100.0 1.7E-41 3.8E-46 362.3 11.1 263 412-686 8-289 (538)
12 KOG0600 Cdc2-related protein k 100.0 1.4E-40 3E-45 357.7 18.0 264 412-689 115-403 (560)
13 KOG0592 3-phosphoinositide-dep 100.0 7.1E-40 1.5E-44 354.7 19.4 252 414-695 73-347 (604)
14 KOG0663 Protein kinase PITSLRE 100.0 1.1E-39 2.5E-44 335.5 18.1 270 409-692 71-367 (419)
15 KOG0616 cAMP-dependent protein 100.0 3.4E-39 7.3E-44 327.8 19.5 215 414-642 44-263 (355)
16 KOG0605 NDR and related serine 100.0 2.3E-38 5.1E-43 343.2 22.5 255 413-697 140-456 (550)
17 KOG0660 Mitogen-activated prot 100.0 9.5E-39 2.1E-43 333.1 18.2 266 412-691 20-315 (359)
18 KOG0671 LAMMER dual specificit 100.0 3.2E-39 7E-44 337.7 14.3 287 400-691 75-411 (415)
19 PTZ00284 protein kinase; Provi 100.0 3E-37 6.6E-42 347.8 28.4 274 413-692 128-444 (467)
20 KOG0658 Glycogen synthase kina 100.0 8.7E-38 1.9E-42 326.5 18.4 260 415-686 25-304 (364)
21 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.4E-37 1.4E-41 322.4 25.2 263 414-689 5-288 (288)
22 KOG0594 Protein kinase PCTAIRE 100.0 1.6E-37 3.5E-42 324.6 19.3 269 414-692 11-308 (323)
23 KOG0583 Serine/threonine prote 100.0 5.4E-37 1.2E-41 334.9 24.2 253 411-691 14-280 (370)
24 KOG0591 NIMA (never in mitosis 100.0 6.5E-39 1.4E-43 323.4 8.1 214 414-637 19-245 (375)
25 KOG0670 U4/U6-associated splic 100.0 3.4E-38 7.3E-43 338.4 11.6 289 399-691 417-751 (752)
26 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-37 3E-42 338.7 16.3 244 414-686 206-455 (468)
27 KOG0694 Serine/threonine prote 100.0 3.1E-37 6.8E-42 342.4 19.0 212 411-635 365-583 (694)
28 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3E-36 6.6E-41 323.0 25.2 265 415-693 1-297 (338)
29 cd07848 STKc_CDKL5 Catalytic d 100.0 4.7E-36 1E-40 314.2 24.4 263 414-689 1-287 (287)
30 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8E-36 1.7E-40 316.0 25.7 267 414-693 5-295 (303)
31 cd07876 STKc_JNK2 Catalytic do 100.0 7.8E-36 1.7E-40 324.3 25.5 274 402-691 6-320 (359)
32 KOG0597 Serine-threonine prote 100.0 4.4E-37 9.6E-42 332.7 15.1 214 414-641 2-221 (808)
33 cd07862 STKc_CDK6 Catalytic do 100.0 8.2E-36 1.8E-40 312.8 23.8 267 414-689 1-290 (290)
34 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.9E-36 8.6E-41 323.1 21.6 259 414-695 1-266 (333)
35 cd05612 STKc_PRKX_like Catalyt 100.0 4.2E-36 9.1E-41 316.9 21.3 251 414-695 1-263 (291)
36 PTZ00263 protein kinase A cata 100.0 3.6E-36 7.9E-41 323.5 20.9 252 413-695 17-280 (329)
37 PTZ00036 glycogen synthase kin 100.0 2E-35 4.3E-40 330.9 26.9 269 412-692 64-357 (440)
38 cd05628 STKc_NDR1 Catalytic do 100.0 1.1E-35 2.3E-40 324.1 23.6 208 414-635 1-251 (363)
39 KOG0588 Serine/threonine prote 100.0 4.1E-36 8.9E-41 331.1 19.5 249 414-693 12-270 (786)
40 KOG0192 Tyrosine kinase specif 100.0 3.3E-36 7.2E-41 326.6 18.1 240 414-678 41-293 (362)
41 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.5E-35 9.8E-40 311.1 26.1 267 414-693 6-293 (309)
42 PTZ00426 cAMP-dependent protei 100.0 1.6E-35 3.5E-40 320.5 22.9 255 409-694 25-292 (340)
43 cd07874 STKc_JNK3 Catalytic do 100.0 3E-35 6.6E-40 319.0 24.8 273 403-691 3-316 (355)
44 cd05599 STKc_NDR_like Catalyti 100.0 1.9E-35 4.1E-40 321.5 21.9 253 414-694 1-304 (364)
45 KOG0611 Predicted serine/threo 100.0 2.7E-36 5.9E-41 315.6 14.2 253 412-696 51-312 (668)
46 cd05629 STKc_NDR_like_fungal C 100.0 1.7E-35 3.7E-40 323.9 21.3 253 414-694 1-313 (377)
47 cd07863 STKc_CDK4 Catalytic do 100.0 8E-35 1.7E-39 304.7 25.3 266 415-689 1-288 (288)
48 PHA03212 serine/threonine kina 100.0 4.9E-35 1.1E-39 322.9 24.8 261 413-692 91-382 (391)
49 cd07875 STKc_JNK1 Catalytic do 100.0 7.5E-35 1.6E-39 317.2 25.4 263 412-690 22-322 (364)
50 KOG0032 Ca2+/calmodulin-depend 100.0 5.4E-35 1.2E-39 319.6 23.9 259 409-692 30-299 (382)
51 cd05631 STKc_GRK4 Catalytic do 100.0 6.2E-35 1.3E-39 306.8 23.3 256 416-696 2-271 (285)
52 KOG0585 Ca2+/calmodulin-depend 100.0 1.9E-35 4E-40 315.8 19.1 251 412-691 95-377 (576)
53 cd05625 STKc_LATS1 Catalytic d 100.0 5E-35 1.1E-39 320.8 22.6 206 415-634 2-262 (382)
54 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.6E-35 3.4E-40 319.6 17.7 254 414-695 1-294 (350)
55 cd07853 STKc_NLK Catalytic dom 100.0 7.1E-35 1.5E-39 318.5 22.9 263 415-691 1-293 (372)
56 cd05598 STKc_LATS Catalytic do 100.0 4.3E-35 9.4E-40 320.4 21.0 253 414-694 1-309 (376)
57 KOG0582 Ste20-like serine/thre 100.0 8.4E-35 1.8E-39 309.2 22.0 261 412-692 24-299 (516)
58 cd05571 STKc_PKB Catalytic dom 100.0 3.9E-35 8.4E-40 314.5 19.5 245 420-695 1-260 (323)
59 cd05626 STKc_LATS2 Catalytic d 100.0 9.7E-35 2.1E-39 318.8 23.0 255 415-694 2-313 (381)
60 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-34 2.9E-39 310.3 23.2 250 415-694 1-265 (324)
61 cd05589 STKc_PKN Catalytic dom 100.0 1.8E-34 3.9E-39 309.3 23.9 249 416-693 1-264 (324)
62 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8.2E-35 1.8E-39 313.9 20.9 266 413-693 14-305 (343)
63 cd05621 STKc_ROCK2 Catalytic d 100.0 2.2E-34 4.8E-39 315.3 22.4 255 413-693 42-311 (370)
64 cd05616 STKc_cPKC_beta Catalyt 100.0 3E-34 6.4E-39 307.5 22.8 209 415-636 1-217 (323)
65 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.8E-34 1.7E-38 300.3 25.7 266 414-692 6-292 (301)
66 cd05601 STKc_CRIK Catalytic do 100.0 8.5E-35 1.9E-39 312.1 18.5 256 414-696 1-273 (330)
67 cd07850 STKc_JNK Catalytic dom 100.0 6.7E-34 1.5E-38 308.4 25.4 273 403-691 2-316 (353)
68 KOG0580 Serine/threonine prote 100.0 6.3E-35 1.4E-39 289.3 15.7 252 411-691 19-278 (281)
69 KOG0033 Ca2+/calmodulin-depend 100.0 3.2E-36 6.8E-41 298.7 6.4 259 411-694 8-275 (355)
70 KOG0578 p21-activated serine/t 100.0 5.6E-35 1.2E-39 319.1 16.8 249 414-691 273-528 (550)
71 cd05627 STKc_NDR2 Catalytic do 100.0 2.1E-34 4.5E-39 313.5 21.1 207 414-634 1-250 (360)
72 KOG4717 Serine/threonine prote 100.0 1.1E-34 2.5E-39 310.5 18.4 258 409-695 13-279 (864)
73 cd05596 STKc_ROCK Catalytic do 100.0 3.7E-34 7.9E-39 313.4 22.4 255 413-695 42-313 (370)
74 PHA03207 serine/threonine kina 100.0 5.1E-34 1.1E-38 314.5 23.5 271 409-697 87-386 (392)
75 cd05591 STKc_nPKC_epsilon Cata 100.0 2.7E-34 5.8E-39 307.5 20.5 246 420-695 1-263 (321)
76 cd05590 STKc_nPKC_eta Catalyti 100.0 3.4E-34 7.4E-39 307.0 20.4 245 420-694 1-261 (320)
77 cd05585 STKc_YPK1_like Catalyt 100.0 5.5E-34 1.2E-38 303.9 21.8 240 422-692 1-253 (312)
78 cd06649 PKc_MEK2 Catalytic dom 100.0 1.2E-33 2.6E-38 304.0 24.7 203 412-628 3-210 (331)
79 cd05593 STKc_PKB_gamma Catalyt 100.0 4.4E-34 9.5E-39 307.3 21.0 243 420-693 1-258 (328)
80 cd07868 STKc_CDK8 Catalytic do 100.0 1E-33 2.2E-38 301.3 23.5 264 419-689 6-317 (317)
81 cd05595 STKc_PKB_beta Catalyti 100.0 6.9E-34 1.5E-38 305.0 21.7 243 420-693 1-258 (323)
82 cd05615 STKc_cPKC_alpha Cataly 100.0 1E-33 2.2E-38 303.8 23.0 208 415-635 1-216 (323)
83 cd05622 STKc_ROCK1 Catalytic d 100.0 8.9E-34 1.9E-38 310.5 22.9 209 413-636 42-263 (371)
84 cd05597 STKc_DMPK_like Catalyt 100.0 7.5E-34 1.6E-38 305.8 21.6 257 414-693 1-273 (331)
85 cd07861 STKc_CDK1_euk Catalyti 100.0 2.3E-33 4.9E-38 292.9 24.6 260 415-689 1-285 (285)
86 cd05592 STKc_nPKC_theta_delta 100.0 9.3E-34 2E-38 303.1 21.9 244 420-693 1-255 (316)
87 cd05620 STKc_nPKC_delta Cataly 100.0 7.6E-34 1.6E-38 303.8 20.6 245 420-694 1-256 (316)
88 KOG0198 MEKK and related serin 100.0 2.9E-34 6.4E-39 303.8 16.4 253 414-693 17-283 (313)
89 PF00069 Pkinase: Protein kina 100.0 3.9E-33 8.5E-38 286.2 24.3 250 416-689 1-260 (260)
90 cd05570 STKc_PKC Catalytic dom 100.0 1.4E-33 3E-38 301.8 21.4 244 420-693 1-259 (318)
91 cd07839 STKc_CDK5 Catalytic do 100.0 2.4E-33 5.2E-38 292.9 22.7 262 415-689 1-284 (284)
92 cd05584 STKc_p70S6K Catalytic 100.0 8.9E-34 1.9E-38 304.0 19.7 244 420-694 2-264 (323)
93 KOG0662 Cyclin-dependent kinas 100.0 2.9E-34 6.3E-39 273.4 13.8 264 415-691 3-288 (292)
94 cd05594 STKc_PKB_alpha Catalyt 100.0 9.4E-34 2E-38 303.9 19.6 243 420-693 1-259 (325)
95 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-33 2.3E-38 303.2 19.9 248 420-694 1-259 (323)
96 cd05614 STKc_MSK2_N N-terminal 100.0 1.2E-33 2.6E-38 303.5 20.0 249 415-693 1-274 (332)
97 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.9E-33 4.2E-38 302.4 21.5 257 412-690 5-332 (338)
98 KOG1026 Nerve growth factor re 100.0 3.1E-34 6.8E-39 326.0 15.7 262 413-694 485-768 (774)
99 cd05619 STKc_nPKC_theta Cataly 100.0 3.6E-33 7.8E-38 298.7 22.9 244 420-693 1-255 (316)
100 cd05624 STKc_MRCK_beta Catalyt 100.0 2.4E-33 5.2E-38 301.9 21.5 209 414-635 1-223 (331)
101 cd05623 STKc_MRCK_alpha Cataly 100.0 3.2E-33 6.9E-38 300.8 22.3 258 414-694 1-274 (332)
102 cd05608 STKc_GRK1 Catalytic do 100.0 5.4E-33 1.2E-37 291.3 23.4 256 422-696 1-267 (280)
103 cd05096 PTKc_DDR1 Catalytic do 100.0 6.3E-33 1.4E-37 293.8 23.9 262 412-690 3-303 (304)
104 cd05605 STKc_GRK4_like Catalyt 100.0 8E-33 1.7E-37 290.8 24.1 254 415-693 1-268 (285)
105 cd07867 STKc_CDC2L6 Catalytic 100.0 8.6E-33 1.9E-37 293.6 24.4 264 419-689 6-317 (317)
106 cd05604 STKc_SGK3 Catalytic do 100.0 2.2E-33 4.8E-38 301.0 19.7 247 420-693 1-258 (325)
107 PTZ00267 NIMA-related protein 100.0 1.5E-32 3.1E-37 310.9 26.8 251 413-689 66-326 (478)
108 cd07844 STKc_PCTAIRE_like Cata 100.0 1.8E-32 3.9E-37 287.6 25.3 263 414-689 5-291 (291)
109 KOG4236 Serine/threonine prote 100.0 4.8E-34 1E-38 306.3 13.4 253 414-692 562-825 (888)
110 cd05602 STKc_SGK1 Catalytic do 100.0 3.3E-33 7.1E-38 299.6 19.9 201 420-634 1-210 (325)
111 cd05586 STKc_Sck1_like Catalyt 100.0 1.1E-33 2.4E-38 303.7 16.2 249 422-693 1-260 (330)
112 cd05603 STKc_SGK2 Catalytic do 100.0 3.6E-33 7.7E-38 298.6 20.0 245 420-691 1-256 (321)
113 KOG0599 Phosphorylase kinase g 100.0 6.1E-34 1.3E-38 286.1 13.0 252 414-691 17-288 (411)
114 cd05588 STKc_aPKC Catalytic do 100.0 4.3E-33 9.3E-38 299.6 20.6 189 420-621 1-197 (329)
115 cd07832 STKc_CCRK Catalytic do 100.0 2.3E-32 5.1E-37 285.1 25.0 263 415-690 1-286 (286)
116 cd05582 STKc_RSK_N N-terminal 100.0 1.6E-33 3.5E-38 300.9 16.6 245 420-695 2-263 (318)
117 cd05630 STKc_GRK6 Catalytic do 100.0 1E-32 2.2E-37 290.2 22.0 253 415-695 1-270 (285)
118 cd05580 STKc_PKA Catalytic dom 100.0 2E-32 4.4E-37 287.9 24.2 252 414-692 1-260 (290)
119 cd05618 STKc_aPKC_iota Catalyt 100.0 6.4E-33 1.4E-37 298.5 20.8 189 420-621 1-197 (329)
120 KOG0610 Putative serine/threon 100.0 2.9E-33 6.2E-38 295.5 17.5 255 413-694 76-400 (459)
121 cd07837 STKc_CdkB_plant Cataly 100.0 3E-32 6.5E-37 286.2 25.2 266 414-690 1-295 (295)
122 KOG0666 Cyclin C-dependent kin 100.0 5.4E-34 1.2E-38 290.9 11.3 266 414-686 24-335 (438)
123 cd06650 PKc_MEK1 Catalytic dom 100.0 2E-32 4.3E-37 295.1 24.1 203 412-628 3-210 (333)
124 cd07841 STKc_CDK7 Catalytic do 100.0 1.9E-32 4E-37 288.5 23.2 263 415-694 1-290 (298)
125 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.4E-32 9.5E-37 285.0 25.7 263 414-689 5-291 (291)
126 PTZ00283 serine/threonine prot 100.0 1.5E-32 3.2E-37 312.0 23.9 253 412-690 30-301 (496)
127 PLN00009 cyclin-dependent kina 100.0 4.4E-32 9.5E-37 285.4 25.5 268 414-692 2-290 (294)
128 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.9E-32 4.2E-37 294.3 23.1 190 420-622 1-198 (327)
129 cd07847 STKc_CDKL1_4 Catalytic 100.0 5E-32 1.1E-36 282.6 25.6 259 414-689 1-286 (286)
130 KOG0201 Serine/threonine prote 100.0 9.7E-35 2.1E-39 308.6 5.1 251 414-694 13-271 (467)
131 cd07849 STKc_ERK1_2_like Catal 100.0 2.3E-32 5E-37 294.2 23.6 263 412-693 3-299 (336)
132 PLN00034 mitogen-activated pro 100.0 3.5E-33 7.7E-38 303.0 17.4 249 414-692 74-334 (353)
133 cd07833 STKc_CDKL Catalytic do 100.0 3.5E-32 7.6E-37 284.1 24.3 259 414-689 1-288 (288)
134 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.1E-32 4.6E-37 284.2 22.3 246 413-687 4-260 (266)
135 cd07845 STKc_CDK10 Catalytic d 100.0 4.4E-32 9.5E-37 288.0 25.1 267 413-692 6-296 (309)
136 PHA03209 serine/threonine kina 100.0 1.2E-32 2.6E-37 299.8 21.1 256 414-691 66-356 (357)
137 KOG0589 Serine/threonine prote 100.0 3.4E-33 7.3E-38 303.3 16.3 245 414-686 4-256 (426)
138 cd06644 STKc_STK10_LOK Catalyt 100.0 2.1E-32 4.5E-37 287.9 21.5 259 413-697 11-280 (292)
139 cd07836 STKc_Pho85 Catalytic d 100.0 7.8E-32 1.7E-36 281.2 25.5 264 415-689 1-284 (284)
140 cd07842 STKc_CDK8_like Catalyt 100.0 4.5E-32 9.7E-37 287.4 24.0 268 415-689 1-316 (316)
141 cd05632 STKc_GRK5 Catalytic do 100.0 3.8E-32 8.3E-37 285.6 23.1 254 415-693 1-268 (285)
142 PTZ00024 cyclin-dependent prot 100.0 3.2E-32 6.9E-37 292.6 22.9 268 412-693 6-320 (335)
143 cd07865 STKc_CDK9 Catalytic do 100.0 5.1E-32 1.1E-36 285.8 24.0 259 414-689 12-310 (310)
144 cd07860 STKc_CDK2_3 Catalytic 100.0 3E-32 6.4E-37 284.7 21.6 259 415-689 1-284 (284)
145 cd07831 STKc_MOK Catalytic dom 100.0 8.2E-32 1.8E-36 280.4 24.6 257 416-689 1-282 (282)
146 cd08529 STKc_FA2-like Catalyti 100.0 6.9E-32 1.5E-36 276.6 23.5 247 415-689 1-256 (256)
147 KOG4721 Serine/threonine prote 100.0 1E-33 2.2E-38 306.2 10.2 231 419-686 129-362 (904)
148 PTZ00266 NIMA-related protein 100.0 5.5E-32 1.2E-36 320.4 25.8 260 409-692 8-301 (1021)
149 PHA03211 serine/threonine kina 100.0 3.6E-32 7.8E-37 305.7 23.0 261 412-690 167-459 (461)
150 cd05574 STKc_phototropin_like 100.0 5.8E-32 1.3E-36 287.7 22.9 255 414-695 1-298 (316)
151 PHA02988 hypothetical protein; 100.0 4.2E-32 9.1E-37 285.9 21.0 242 420-692 26-279 (283)
152 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6E-32 1.3E-36 291.3 22.5 262 412-691 3-296 (337)
153 cd07834 STKc_MAPK Catalytic do 100.0 2.7E-32 5.8E-37 292.1 19.6 261 415-693 1-296 (330)
154 KOG0604 MAP kinase-activated p 100.0 3.7E-33 8E-38 283.8 12.2 255 413-693 60-329 (400)
155 cd05072 PTKc_Lyn Catalytic dom 100.0 9.2E-32 2E-36 277.5 22.9 250 412-690 4-259 (261)
156 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-31 3E-36 287.9 24.8 261 412-691 8-293 (328)
157 cd06619 PKc_MKK5 Catalytic dom 100.0 9.9E-32 2.1E-36 281.2 23.0 253 415-695 2-262 (279)
158 cd07840 STKc_CDK9_like Catalyt 100.0 8.2E-32 1.8E-36 280.4 22.0 257 416-689 1-287 (287)
159 cd07843 STKc_CDC2L1 Catalytic 100.0 1.3E-31 2.7E-36 281.8 23.5 259 414-689 5-293 (293)
160 cd07835 STKc_CDK1_like Catalyt 100.0 1.1E-31 2.4E-36 280.2 22.9 258 416-689 1-283 (283)
161 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-31 2.4E-36 276.6 22.5 247 414-689 2-263 (263)
162 cd06637 STKc_TNIK Catalytic do 100.0 6.8E-32 1.5E-36 279.9 20.9 251 413-689 5-272 (272)
163 KOG0193 Serine/threonine prote 100.0 5.6E-33 1.2E-37 304.4 13.1 248 407-679 385-644 (678)
164 cd05052 PTKc_Abl Catalytic dom 100.0 1.4E-31 3E-36 277.1 22.8 250 412-689 4-259 (263)
165 cd06611 STKc_SLK_like Catalyti 100.0 6.6E-32 1.4E-36 281.8 20.4 256 414-696 5-272 (280)
166 cd07855 STKc_ERK5 Catalytic do 100.0 6.4E-32 1.4E-36 290.6 20.8 264 413-694 4-302 (334)
167 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-31 2.6E-36 289.8 22.8 261 413-693 14-304 (342)
168 cd05607 STKc_GRK7 Catalytic do 100.0 1E-31 2.3E-36 281.2 21.5 191 422-624 1-198 (277)
169 cd06643 STKc_SLK Catalytic dom 100.0 8E-32 1.7E-36 281.7 20.6 255 416-696 7-272 (282)
170 cd07851 STKc_p38 Catalytic dom 100.0 7.1E-32 1.5E-36 291.6 20.8 263 412-693 13-305 (343)
171 cd05106 PTKc_CSF-1R Catalytic 100.0 6.6E-32 1.4E-36 296.1 20.9 257 411-689 35-369 (374)
172 cd05067 PTKc_Lck_Blk Catalytic 100.0 2E-31 4.3E-36 275.2 23.0 251 411-691 3-259 (260)
173 cd05071 PTKc_Src Catalytic dom 100.0 1.7E-31 3.8E-36 276.8 22.6 249 412-690 4-258 (262)
174 cd07857 STKc_MPK1 Catalytic do 100.0 3.1E-31 6.7E-36 285.0 25.2 266 415-693 1-299 (332)
175 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.9E-31 6.2E-36 287.1 25.1 267 412-693 13-305 (343)
176 cd07864 STKc_CDK12 Catalytic d 100.0 1.8E-31 3.8E-36 281.3 22.8 263 410-689 3-302 (302)
177 cd06615 PKc_MEK Catalytic doma 100.0 2.2E-31 4.8E-36 283.2 23.7 200 414-627 1-205 (308)
178 cd06609 STKc_MST3_like Catalyt 100.0 1.9E-31 4.1E-36 277.4 22.7 252 414-695 1-260 (274)
179 cd08219 STKc_Nek3 Catalytic do 100.0 2.3E-31 4.9E-36 273.7 23.0 244 415-686 1-250 (255)
180 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2E-31 4.3E-36 275.2 22.5 251 411-691 3-259 (260)
181 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.3E-31 5E-36 274.1 22.7 243 414-686 4-252 (256)
182 cd05049 PTKc_Trk Catalytic dom 100.0 9.6E-32 2.1E-36 279.9 20.0 253 414-690 5-279 (280)
183 cd05118 STKc_CMGC Catalytic do 100.0 1.2E-31 2.6E-36 279.0 20.6 257 416-689 1-283 (283)
184 cd07838 STKc_CDK4_6_like Catal 100.0 4.1E-31 8.8E-36 275.6 24.6 261 416-689 1-287 (287)
185 cd08221 STKc_Nek9 Catalytic do 100.0 4.4E-31 9.5E-36 271.4 24.4 244 415-686 1-251 (256)
186 cd05609 STKc_MAST Catalytic do 100.0 3.6E-31 7.8E-36 280.7 24.4 255 414-696 1-283 (305)
187 cd05048 PTKc_Ror Catalytic Dom 100.0 2.1E-31 4.6E-36 278.1 22.1 253 414-690 5-281 (283)
188 cd05068 PTKc_Frk_like Catalyti 100.0 4.2E-31 9E-36 272.9 24.0 249 412-689 4-258 (261)
189 cd06646 STKc_MAP4K5 Catalytic 100.0 1.5E-31 3.3E-36 276.8 20.7 248 413-686 8-263 (267)
190 PHA02882 putative serine/threo 100.0 4.6E-31 9.9E-36 279.1 24.7 262 407-687 5-291 (294)
191 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.8E-31 3.9E-36 278.8 21.2 251 413-689 15-282 (282)
192 cd08228 STKc_Nek6 Catalytic do 100.0 3E-31 6.4E-36 274.3 22.6 249 414-687 2-260 (267)
193 KOG0596 Dual specificity; seri 100.0 2.8E-32 6E-37 295.7 15.4 253 413-692 360-633 (677)
194 cd05059 PTKc_Tec_like Catalyti 100.0 2.8E-31 6.1E-36 273.7 22.3 246 414-689 4-255 (256)
195 cd06608 STKc_myosinIII_like Ca 100.0 3.6E-31 7.8E-36 273.5 23.1 254 413-689 5-275 (275)
196 cd06655 STKc_PAK2 Catalytic do 100.0 6.9E-31 1.5E-35 278.0 25.7 249 414-691 19-274 (296)
197 PHA03210 serine/threonine kina 100.0 9.7E-32 2.1E-36 305.8 20.3 275 408-691 142-459 (501)
198 cd05034 PTKc_Src_like Catalyti 100.0 6E-31 1.3E-35 271.1 24.1 252 411-691 3-260 (261)
199 cd07866 STKc_BUR1 Catalytic do 100.0 3.6E-31 7.7E-36 279.5 22.9 265 412-689 6-311 (311)
200 KOG0579 Ste20-like serine/thre 100.0 6.1E-33 1.3E-37 302.4 9.4 257 414-696 32-299 (1187)
201 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.2E-31 1.6E-35 284.2 25.5 266 412-692 15-306 (345)
202 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.3E-31 9.3E-36 275.5 22.8 256 414-694 1-269 (283)
203 KOG0574 STE20-like serine/thre 100.0 1.1E-33 2.5E-38 286.9 3.2 204 415-632 34-241 (502)
204 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.6E-31 3.4E-36 275.5 19.1 250 413-691 5-260 (261)
205 cd05069 PTKc_Yes Catalytic dom 100.0 4.7E-31 1E-35 272.7 22.8 250 412-691 4-259 (260)
206 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.2E-31 7E-36 273.8 21.4 244 414-687 4-253 (256)
207 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.5E-31 3.3E-36 279.9 19.1 256 414-693 1-269 (286)
208 cd08223 STKc_Nek4 Catalytic do 100.0 7.1E-31 1.5E-35 269.7 23.7 247 415-689 1-257 (257)
209 KOG0194 Protein tyrosine kinas 100.0 4.9E-32 1.1E-36 299.1 16.0 253 409-690 152-418 (474)
210 KOG0607 MAP kinase-interacting 100.0 3.1E-32 6.6E-37 278.8 13.2 257 414-694 77-369 (463)
211 KOG0612 Rho-associated, coiled 100.0 5.4E-33 1.2E-37 320.5 8.7 255 413-697 74-349 (1317)
212 cd08218 STKc_Nek1 Catalytic do 100.0 7.6E-31 1.7E-35 269.6 23.8 247 415-689 1-256 (256)
213 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.7E-31 5.8E-36 277.5 20.7 259 414-689 1-286 (286)
214 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-30 2.3E-35 276.4 25.4 251 413-692 19-276 (296)
215 KOG4250 TANK binding protein k 100.0 2.8E-32 6E-37 303.9 13.7 206 408-622 7-226 (732)
216 cd07830 STKc_MAK_like Catalyti 100.0 2E-31 4.4E-36 277.9 19.5 259 416-689 1-283 (283)
217 cd06613 STKc_MAP4K3_like Catal 100.0 7.2E-31 1.6E-35 270.0 23.2 248 414-686 3-258 (262)
218 cd05104 PTKc_Kit Catalytic dom 100.0 2.6E-31 5.7E-36 291.3 21.1 253 413-687 34-369 (375)
219 KOG1187 Serine/threonine prote 100.0 8.3E-32 1.8E-36 293.4 17.0 197 414-623 75-281 (361)
220 cd05035 PTKc_Axl_like Catalyti 100.0 5.7E-31 1.2E-35 272.4 22.4 251 416-690 1-270 (273)
221 cd06607 STKc_TAO Catalytic dom 100.0 4.7E-31 1E-35 280.1 22.2 252 411-691 12-272 (307)
222 PF07714 Pkinase_Tyr: Protein 100.0 3.8E-31 8.3E-36 274.4 20.9 242 417-686 2-256 (259)
223 cd08220 STKc_Nek8 Catalytic do 100.0 8.9E-31 1.9E-35 268.4 23.3 248 415-689 1-256 (256)
224 cd06612 STKc_MST1_2 Catalytic 100.0 8.1E-31 1.8E-35 268.7 23.0 248 414-689 3-256 (256)
225 cd06605 PKc_MAPKK Catalytic do 100.0 1.9E-31 4.1E-36 275.1 18.3 253 414-694 1-265 (265)
226 cd07829 STKc_CDK_like Catalyti 100.0 4.3E-31 9.3E-36 274.7 21.0 257 416-689 1-282 (282)
227 cd05082 PTKc_Csk Catalytic dom 100.0 9.6E-31 2.1E-35 269.4 23.3 247 414-691 6-255 (256)
228 cd05062 PTKc_IGF-1R Catalytic 100.0 9E-31 1.9E-35 273.1 23.3 253 410-686 2-272 (277)
229 cd06656 STKc_PAK3 Catalytic do 100.0 7.8E-31 1.7E-35 277.5 23.0 252 413-693 18-276 (297)
230 cd05032 PTKc_InsR_like Catalyt 100.0 7.4E-31 1.6E-35 272.8 22.4 256 411-690 3-276 (277)
231 cd06639 STKc_myosinIIIB Cataly 100.0 1.6E-30 3.4E-35 273.2 25.1 254 413-689 21-290 (291)
232 cd05075 PTKc_Axl Catalytic dom 100.0 7.4E-31 1.6E-35 272.1 22.3 249 417-689 2-268 (272)
233 cd05572 STKc_cGK_PKG Catalytic 100.0 9.2E-31 2E-35 270.2 22.8 245 422-695 1-261 (262)
234 cd05039 PTKc_Csk_like Catalyti 100.0 1.5E-30 3.2E-35 267.8 24.2 248 413-690 5-254 (256)
235 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.7E-31 1.2E-35 272.2 21.2 245 415-689 1-267 (267)
236 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.1E-30 2.3E-35 272.8 23.4 256 413-690 5-276 (277)
237 cd05088 PTKc_Tie2 Catalytic do 100.0 6.5E-31 1.4E-35 279.0 21.9 250 414-686 7-274 (303)
238 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-30 3.1E-35 276.4 24.2 253 411-686 15-293 (307)
239 cd05108 PTKc_EGFR Catalytic do 100.0 7.6E-31 1.6E-35 279.8 22.2 246 413-688 6-264 (316)
240 cd05051 PTKc_DDR Catalytic dom 100.0 1.3E-30 2.8E-35 273.9 23.4 261 413-690 4-295 (296)
241 KOG1095 Protein tyrosine kinas 100.0 1.6E-31 3.5E-36 313.4 18.2 254 413-686 691-959 (1025)
242 cd05090 PTKc_Ror1 Catalytic do 100.0 8E-31 1.7E-35 274.3 21.5 250 414-687 5-278 (283)
243 cd05089 PTKc_Tie1 Catalytic do 100.0 1E-30 2.2E-35 276.2 22.5 250 414-686 2-269 (297)
244 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.2E-30 2.6E-35 270.3 22.6 249 413-690 4-265 (268)
245 cd06652 STKc_MEKK2 Catalytic d 100.0 2.2E-30 4.7E-35 268.2 24.4 246 414-689 2-264 (265)
246 cd06638 STKc_myosinIIIA Cataly 100.0 9.3E-31 2E-35 273.7 21.8 255 412-689 16-286 (286)
247 cd06616 PKc_MKK4 Catalytic dom 100.0 4.8E-31 1E-35 276.4 19.6 263 415-696 5-277 (288)
248 cd05093 PTKc_TrkB Catalytic do 100.0 1.2E-30 2.6E-35 274.2 22.7 254 414-691 5-278 (288)
249 cd06645 STKc_MAP4K3 Catalytic 100.0 4.6E-31 1E-35 273.2 19.2 247 414-686 9-263 (267)
250 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-30 2.5E-35 280.0 22.8 202 418-631 2-221 (327)
251 cd05084 PTKc_Fes Catalytic dom 100.0 1.2E-30 2.5E-35 267.9 21.7 239 420-687 1-248 (252)
252 PRK13184 pknD serine/threonine 100.0 1.1E-30 2.3E-35 308.2 24.3 206 414-627 2-238 (932)
253 cd07852 STKc_MAPK15 Catalytic 100.0 6.9E-31 1.5E-35 282.7 20.8 265 411-693 4-302 (337)
254 cd05033 PTKc_EphR Catalytic do 100.0 1.6E-30 3.4E-35 269.4 22.7 248 414-690 4-263 (266)
255 cd05611 STKc_Rim15_like Cataly 100.0 2.8E-30 6.1E-35 266.3 24.4 248 420-694 2-259 (260)
256 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.3E-30 2.9E-35 281.6 22.9 265 413-691 4-305 (342)
257 cd05061 PTKc_InsR Catalytic do 100.0 2.2E-30 4.7E-35 272.3 23.8 252 411-686 3-272 (288)
258 cd05053 PTKc_FGFR Catalytic do 100.0 1.8E-30 4E-35 272.7 23.2 255 413-690 11-289 (293)
259 cd06632 STKc_MEKK1_plant Catal 100.0 1.6E-30 3.5E-35 266.5 22.2 246 415-689 1-258 (258)
260 cd05606 STKc_beta_ARK Catalyti 100.0 2.1E-30 4.5E-35 271.5 23.4 249 421-697 1-266 (278)
261 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.9E-30 4.1E-35 274.8 23.3 256 411-689 12-293 (304)
262 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.4E-30 3.1E-35 288.2 23.2 255 413-689 36-394 (400)
263 cd05054 PTKc_VEGFR Catalytic d 100.0 6.7E-31 1.5E-35 284.0 20.0 257 412-690 5-331 (337)
264 cd05112 PTKc_Itk Catalytic dom 100.0 2.7E-30 5.9E-35 265.5 23.1 246 414-689 4-255 (256)
265 cd06640 STKc_MST4 Catalytic do 100.0 1.8E-30 3.8E-35 271.2 22.0 250 414-694 4-261 (277)
266 KOG0577 Serine/threonine prote 100.0 7.5E-32 1.6E-36 292.8 11.7 207 415-635 27-240 (948)
267 cd05045 PTKc_RET Catalytic dom 100.0 2.2E-30 4.7E-35 272.3 22.5 252 415-690 1-284 (290)
268 cd06623 PKc_MAPKK_plant_like C 100.0 2.2E-30 4.8E-35 266.3 22.1 249 415-693 2-263 (264)
269 cd05073 PTKc_Hck Catalytic dom 100.0 3.1E-30 6.8E-35 266.5 23.3 251 410-690 2-258 (260)
270 cd05091 PTKc_Ror2 Catalytic do 100.0 4.1E-31 8.8E-36 276.3 16.7 250 414-687 5-278 (283)
271 cd06917 STKc_NAK1_like Catalyt 100.0 1.8E-30 3.9E-35 270.3 21.5 255 415-696 2-265 (277)
272 KOG1989 ARK protein kinase fam 100.0 7.7E-31 1.7E-35 299.6 20.3 201 413-624 36-262 (738)
273 cd05581 STKc_PDK1 Catalytic do 100.0 1.1E-30 2.3E-35 271.0 19.7 246 414-689 1-280 (280)
274 KOG0690 Serine/threonine prote 100.0 5E-32 1.1E-36 277.5 9.4 215 413-640 167-388 (516)
275 cd05066 PTKc_EphR_A Catalytic 100.0 3.2E-30 7E-35 267.5 23.1 248 413-689 3-263 (267)
276 cd06631 STKc_YSK4 Catalytic do 100.0 3.2E-30 7E-35 266.6 23.0 246 415-689 1-265 (265)
277 cd06626 STKc_MEKK4 Catalytic d 100.0 3.5E-30 7.6E-35 265.2 23.1 247 415-689 1-264 (264)
278 cd00192 PTKc Catalytic domain 100.0 1.9E-30 4E-35 265.5 20.8 246 420-689 1-261 (262)
279 cd05065 PTKc_EphR_B Catalytic 100.0 2.5E-30 5.5E-35 268.3 22.0 244 414-686 4-262 (269)
280 cd05060 PTKc_Syk_like Catalyti 100.0 3.3E-30 7.2E-35 265.6 22.7 243 420-693 1-256 (257)
281 cd05083 PTKc_Chk Catalytic dom 100.0 1.8E-30 3.9E-35 267.1 20.7 245 414-690 6-252 (254)
282 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.5E-30 7.6E-35 277.1 23.7 256 411-689 9-290 (334)
283 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.2E-30 9E-35 273.9 24.0 255 412-689 10-290 (314)
284 KOG4278 Protein tyrosine kinas 100.0 3.9E-31 8.4E-36 287.9 16.1 233 414-670 267-505 (1157)
285 cd05109 PTKc_HER2 Catalytic do 100.0 3.6E-30 7.7E-35 268.9 22.8 244 413-686 6-262 (279)
286 cd08217 STKc_Nek2 Catalytic do 100.0 3.7E-30 7.9E-35 264.2 22.3 249 415-689 1-265 (265)
287 cd05094 PTKc_TrkC Catalytic do 100.0 5.2E-30 1.1E-34 269.8 23.8 253 414-690 5-280 (291)
288 cd05116 PTKc_Syk Catalytic dom 100.0 4.1E-30 9E-35 265.2 22.3 238 421-689 2-252 (257)
289 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.7E-30 1.4E-34 263.6 23.6 249 414-687 2-260 (267)
290 cd06635 STKc_TAO1 Catalytic do 100.0 5.2E-30 1.1E-34 273.7 23.6 251 414-693 25-284 (317)
291 cd05097 PTKc_DDR_like Catalyti 100.0 2.2E-30 4.8E-35 273.1 20.4 261 413-690 4-294 (295)
292 cd08229 STKc_Nek7 Catalytic do 100.0 1.5E-30 3.2E-35 269.1 18.6 248 414-686 2-259 (267)
293 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.2E-30 1.3E-34 268.7 23.6 260 414-693 1-273 (287)
294 cd05111 PTK_HER3 Pseudokinase 100.0 3.4E-30 7.3E-35 269.8 21.3 246 414-689 7-265 (279)
295 cd05042 PTKc_Aatyk Catalytic d 100.0 4.5E-30 9.8E-35 266.4 22.1 247 421-689 2-267 (269)
296 cd06651 STKc_MEKK3 Catalytic d 100.0 5.4E-30 1.2E-34 265.7 22.6 247 414-690 2-265 (266)
297 smart00219 TyrKc Tyrosine kina 100.0 5E-30 1.1E-34 262.5 22.1 246 416-689 1-258 (258)
298 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-30 3E-35 268.3 17.9 244 415-689 1-258 (258)
299 cd05577 STKc_GRK Catalytic dom 100.0 3.6E-30 7.7E-35 268.9 21.2 252 422-694 1-262 (277)
300 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.6E-30 3.6E-35 272.4 18.7 251 414-690 5-270 (284)
301 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.3E-30 7.1E-35 269.7 20.8 257 414-691 3-280 (283)
302 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7.3E-30 1.6E-34 263.0 23.1 254 414-689 1-267 (267)
303 cd05122 PKc_STE Catalytic doma 100.0 9.9E-30 2.1E-34 258.0 23.7 247 415-688 1-253 (253)
304 cd05579 STKc_MAST_like Catalyt 100.0 2.6E-30 5.7E-35 265.3 19.6 244 422-694 1-265 (265)
305 cd05057 PTKc_EGFR_like Catalyt 100.0 7.6E-30 1.6E-34 266.4 23.4 248 413-690 6-266 (279)
306 cd05047 PTKc_Tie Catalytic dom 100.0 6.2E-30 1.3E-34 266.1 22.6 246 420-688 1-264 (270)
307 cd08225 STKc_Nek5 Catalytic do 100.0 8.7E-30 1.9E-34 261.3 23.3 248 415-689 1-257 (257)
308 cd05055 PTKc_PDGFR Catalytic d 100.0 5.4E-30 1.2E-34 272.0 22.3 253 411-689 32-298 (302)
309 cd05095 PTKc_DDR2 Catalytic do 100.0 6.1E-30 1.3E-34 269.9 22.5 259 413-688 4-293 (296)
310 cd05115 PTKc_Zap-70 Catalytic 100.0 8.2E-30 1.8E-34 263.7 22.9 240 421-690 2-253 (257)
311 cd08215 STKc_Nek Catalytic dom 100.0 7.9E-30 1.7E-34 260.3 22.3 249 415-689 1-258 (258)
312 cd06630 STKc_MEKK1 Catalytic d 100.0 4.8E-30 1E-34 265.1 20.8 247 415-689 1-267 (268)
313 KOG0586 Serine/threonine prote 100.0 6.7E-31 1.4E-35 289.5 15.0 249 413-675 55-315 (596)
314 cd06659 STKc_PAK6 Catalytic do 100.0 2.9E-30 6.3E-35 273.4 19.3 250 416-693 23-278 (297)
315 cd06658 STKc_PAK5 Catalytic do 100.0 3.1E-30 6.7E-35 272.5 19.4 249 414-691 22-277 (292)
316 PHA03390 pk1 serine/threonine- 100.0 6.9E-30 1.5E-34 266.2 21.7 245 414-690 14-266 (267)
317 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.1E-29 2.3E-34 265.6 23.2 260 414-691 4-282 (284)
318 KOG1094 Discoidin domain recep 100.0 8.8E-31 1.9E-35 284.8 15.3 259 410-690 534-802 (807)
319 KOG0584 Serine/threonine prote 100.0 4.5E-31 9.7E-36 291.1 13.2 249 413-691 38-301 (632)
320 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-30 2.3E-35 272.5 15.4 250 414-694 4-261 (277)
321 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.6E-30 2.1E-34 264.1 22.4 248 415-689 2-272 (272)
322 cd06634 STKc_TAO2 Catalytic do 100.0 4.5E-30 9.8E-35 273.1 20.2 253 414-695 15-276 (308)
323 cd06618 PKc_MKK7 Catalytic dom 100.0 6.2E-30 1.4E-34 269.8 20.9 254 414-693 15-280 (296)
324 cd05050 PTKc_Musk Catalytic do 100.0 9.7E-30 2.1E-34 266.8 22.3 253 413-689 4-286 (288)
325 cd05043 PTK_Ryk Pseudokinase d 100.0 1E-29 2.2E-34 265.2 22.4 255 413-691 5-275 (280)
326 cd05056 PTKc_FAK Catalytic dom 100.0 8.5E-30 1.9E-34 264.5 21.6 248 413-690 5-263 (270)
327 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-29 2.5E-34 266.0 22.7 253 413-692 18-276 (286)
328 cd05633 STKc_GRK3 Catalytic do 100.0 1.8E-29 4E-34 264.7 23.8 246 421-693 1-262 (279)
329 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.9E-30 1.1E-34 277.5 20.0 256 412-689 5-336 (343)
330 cd05107 PTKc_PDGFR_beta Cataly 100.0 1E-29 2.2E-34 281.6 22.5 253 413-687 36-394 (401)
331 cd05092 PTKc_TrkA Catalytic do 100.0 1.4E-29 3.1E-34 264.9 22.5 251 413-687 4-276 (280)
332 cd05040 PTKc_Ack_like Catalyti 100.0 1.3E-29 2.8E-34 260.6 21.6 243 420-690 1-256 (257)
333 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.5E-29 3.2E-34 262.8 22.2 246 421-688 2-266 (269)
334 cd06627 STKc_Cdc7_like Catalyt 100.0 3.2E-29 6.8E-34 256.0 24.2 245 415-689 1-254 (254)
335 cd05041 PTKc_Fes_like Catalyti 100.0 1.6E-29 3.6E-34 258.9 22.0 241 420-690 1-250 (251)
336 cd06641 STKc_MST3 Catalytic do 100.0 1.6E-29 3.5E-34 263.9 22.3 246 415-691 5-258 (277)
337 KOG0196 Tyrosine kinase, EPH ( 100.0 6.7E-31 1.5E-35 293.6 12.3 236 414-674 629-877 (996)
338 cd06633 STKc_TAO3 Catalytic do 100.0 2.6E-29 5.7E-34 268.0 23.5 248 415-691 22-278 (313)
339 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.7E-29 1E-33 258.3 24.7 243 414-686 2-259 (264)
340 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-29 3E-34 260.0 20.2 237 420-687 1-256 (259)
341 cd05085 PTKc_Fer Catalytic dom 100.0 3E-29 6.5E-34 256.8 22.4 240 420-689 1-248 (250)
342 cd06647 STKc_PAK_I Catalytic d 100.0 2.1E-29 4.5E-34 266.1 21.8 250 413-691 18-274 (293)
343 KOG0199 ACK and related non-re 100.0 8.6E-31 1.9E-35 289.2 11.4 233 414-671 110-355 (1039)
344 KOG1151 Tousled-like protein k 100.0 2.7E-31 5.9E-36 280.5 7.2 209 411-630 460-695 (775)
345 cd06648 STKc_PAK_II Catalytic 100.0 3.2E-29 6.9E-34 263.5 22.8 249 415-692 20-275 (285)
346 KOG2345 Serine/threonine prote 100.0 3.4E-30 7.3E-35 256.8 14.2 251 413-686 20-294 (302)
347 cd05110 PTKc_HER4 Catalytic do 100.0 2.4E-29 5.2E-34 266.7 21.6 244 413-686 6-262 (303)
348 KOG0664 Nemo-like MAPK-related 100.0 1E-31 2.2E-36 269.9 2.9 254 420-687 59-342 (449)
349 cd05044 PTKc_c-ros Catalytic d 100.0 1.5E-29 3.3E-34 261.8 19.2 245 421-687 2-265 (269)
350 KOG0668 Casein kinase II, alph 100.0 1.5E-30 3.3E-35 256.2 11.0 277 396-690 22-326 (338)
351 cd05613 STKc_MSK1_N N-terminal 100.0 4.2E-29 9E-34 262.3 22.6 253 415-693 1-275 (290)
352 cd06606 STKc_MAPKKK Catalytic 100.0 8.2E-29 1.8E-33 252.3 24.0 246 415-689 1-260 (260)
353 cd08528 STKc_Nek10 Catalytic d 100.0 3.4E-29 7.3E-34 259.6 21.1 249 415-687 1-265 (269)
354 cd08226 PK_STRAD_beta Pseudoki 100.0 2.7E-29 5.8E-34 269.5 20.7 203 420-634 4-224 (328)
355 cd05046 PTK_CCK4 Pseudokinase 100.0 3.1E-29 6.6E-34 260.7 20.4 252 414-688 5-272 (275)
356 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.4E-29 3E-34 261.7 17.7 237 420-686 1-254 (258)
357 KOG0669 Cyclin T-dependent kin 100.0 1.9E-31 4E-36 265.7 3.5 261 413-686 16-313 (376)
358 KOG0603 Ribosomal protein S6 k 100.0 5.1E-30 1.1E-34 283.8 14.9 246 412-690 320-567 (612)
359 cd06624 STKc_ASK Catalytic dom 100.0 8.1E-29 1.8E-33 256.8 23.1 246 419-689 13-268 (268)
360 cd06657 STKc_PAK4 Catalytic do 100.0 5.2E-29 1.1E-33 263.3 22.1 243 419-690 25-274 (292)
361 cd05123 STKc_AGC Catalytic dom 100.0 2.8E-29 6.1E-34 256.4 19.3 237 422-689 1-250 (250)
362 cd05610 STKc_MASTL Catalytic d 100.0 1.1E-28 2.4E-33 289.8 26.6 144 414-571 4-152 (669)
363 cd05058 PTKc_Met_Ron Catalytic 100.0 4E-29 8.7E-34 257.7 20.2 240 420-688 1-255 (262)
364 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.8E-29 1.3E-33 260.2 21.6 238 421-687 2-271 (274)
365 cd08222 STKc_Nek11 Catalytic d 100.0 1.8E-29 3.8E-34 260.4 17.3 248 415-689 1-260 (260)
366 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.5E-29 9.7E-34 259.8 20.5 252 414-690 4-281 (284)
367 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.9E-29 1.3E-33 258.0 21.3 248 416-687 1-267 (273)
368 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5E-29 1.1E-33 258.8 20.7 239 420-687 1-259 (262)
369 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.3E-29 9.2E-34 261.7 20.1 254 415-690 5-281 (284)
370 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.1E-28 2.3E-33 256.7 22.8 247 421-689 2-266 (268)
371 cd05583 STKc_MSK_N N-terminal 100.0 6.4E-29 1.4E-33 260.6 20.8 252 415-696 1-276 (288)
372 KOG4279 Serine/threonine prote 100.0 2.1E-30 4.4E-35 285.3 9.7 229 421-658 582-820 (1226)
373 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-28 2.4E-33 252.6 21.5 246 415-686 1-251 (256)
374 KOG0986 G protein-coupled rece 100.0 1.1E-29 2.4E-34 270.0 13.8 201 413-624 184-390 (591)
375 KOG0983 Mitogen-activated prot 100.0 2.3E-30 4.9E-35 260.6 7.8 208 415-634 93-309 (391)
376 KOG0614 cGMP-dependent protein 100.0 1.6E-30 3.5E-35 279.0 6.8 210 414-637 420-636 (732)
377 KOG4257 Focal adhesion tyrosin 100.0 9.4E-30 2E-34 278.0 12.5 235 415-675 390-636 (974)
378 cd08216 PK_STRAD Pseudokinase 100.0 3.1E-28 6.6E-33 258.6 21.8 191 426-628 12-218 (314)
379 KOG0665 Jun-N-terminal kinase 100.0 3.1E-29 6.7E-34 257.7 12.6 263 411-690 14-314 (369)
380 KOG0608 Warts/lats-like serine 100.0 2.7E-29 5.9E-34 274.6 12.3 206 413-632 628-883 (1034)
381 KOG0984 Mitogen-activated prot 100.0 4.3E-29 9.3E-34 243.0 12.1 213 414-635 46-268 (282)
382 KOG4645 MAPKKK (MAP kinase kin 100.0 4.2E-30 9E-35 300.0 3.5 214 413-640 1234-1461(1509)
383 KOG2052 Activin A type IB rece 100.0 1.1E-28 2.5E-33 262.4 13.8 255 401-686 198-497 (513)
384 KOG0695 Serine/threonine prote 100.0 1.2E-28 2.6E-33 253.3 13.0 219 413-643 249-482 (593)
385 KOG1006 Mitogen-activated prot 100.0 3.9E-30 8.4E-35 258.2 1.4 217 410-634 60-284 (361)
386 KOG1152 Signal transduction se 100.0 6.6E-29 1.4E-33 270.2 10.8 197 415-622 562-771 (772)
387 cd05576 STKc_RPK118_like Catal 100.0 1.1E-27 2.5E-32 244.9 17.7 180 425-622 4-184 (237)
388 KOG0200 Fibroblast/platelet-de 99.9 2.4E-27 5.2E-32 275.2 19.0 257 410-685 292-576 (609)
389 KOG1035 eIF-2alpha kinase GCN2 99.9 5.6E-28 1.2E-32 281.2 13.5 250 413-690 478-875 (1351)
390 KOG0587 Traf2- and Nck-interac 99.9 2.6E-27 5.7E-32 268.5 18.4 209 413-632 18-240 (953)
391 PLN03225 Serine/threonine-prot 99.9 5.7E-27 1.2E-31 269.8 20.0 270 413-694 131-458 (566)
392 KOG3653 Transforming growth fa 99.9 1.2E-27 2.6E-32 256.3 12.5 256 414-686 210-501 (534)
393 KOG1025 Epidermal growth facto 99.9 7.7E-28 1.7E-32 269.8 10.1 242 416-683 698-952 (1177)
394 smart00220 S_TKc Serine/Threon 99.9 4.3E-26 9.3E-31 229.3 18.7 236 426-689 1-244 (244)
395 smart00221 STYKc Protein kinas 99.9 2.4E-25 5.2E-30 222.5 20.7 206 416-634 1-216 (225)
396 PLN00113 leucine-rich repeat r 99.9 4.9E-26 1.1E-30 278.1 17.4 252 414-691 690-950 (968)
397 PLN03224 probable serine/threo 99.9 5.9E-25 1.3E-29 248.4 21.3 207 413-622 144-435 (507)
398 KOG1024 Receptor-like protein 99.9 1.3E-25 2.8E-30 235.3 13.5 250 413-686 283-549 (563)
399 KOG1027 Serine/threonine prote 99.9 4.2E-26 9E-31 257.8 9.5 192 420-623 515-718 (903)
400 KOG1167 Serine/threonine prote 99.9 2.3E-25 5E-30 236.6 8.9 212 412-639 34-298 (418)
401 KOG1345 Serine/threonine kinas 99.9 2.2E-25 4.9E-30 224.6 6.0 199 413-623 23-228 (378)
402 KOG1163 Casein kinase (serine/ 99.9 6.2E-24 1.4E-28 211.1 14.9 225 411-646 12-250 (341)
403 cd00180 PKc Catalytic domain o 99.9 1E-22 2.3E-27 198.8 20.2 180 422-613 1-187 (215)
404 KOG0576 Mitogen-activated prot 99.9 1.3E-24 2.8E-29 240.3 4.6 247 414-686 15-269 (829)
405 KOG1164 Casein kinase (serine/ 99.9 2.4E-22 5.2E-27 216.3 20.2 205 415-625 19-242 (322)
406 KOG1165 Casein kinase (serine/ 99.9 2E-22 4.4E-27 208.2 14.7 224 411-645 25-264 (449)
407 PLN00181 protein SPA1-RELATED; 99.9 2.4E-22 5.2E-27 240.9 8.5 142 476-622 33-217 (793)
408 cd08677 C2A_Synaptotagmin-13 C 99.8 1.2E-21 2.5E-26 179.2 5.1 93 264-362 12-106 (118)
409 PRK09188 serine/threonine prot 99.8 1.6E-20 3.5E-25 204.3 14.8 162 408-593 12-193 (365)
410 COG0515 SPS1 Serine/threonine 99.8 4.2E-19 9E-24 182.5 22.7 197 416-625 2-216 (384)
411 smart00750 KIND kinase non-cat 99.8 6.4E-20 1.4E-24 178.5 13.2 166 500-690 1-169 (176)
412 PRK10359 lipopolysaccharide co 99.8 1.1E-19 2.4E-24 185.4 10.3 177 404-614 21-216 (232)
413 cd08692 C2B_Tac2-N C2 domain s 99.8 3.3E-20 7.3E-25 173.5 2.8 107 263-371 11-119 (135)
414 KOG0590 Checkpoint kinase and 99.8 4.9E-20 1.1E-24 212.6 4.4 260 414-693 317-592 (601)
415 cd05147 RIO1_euk RIO kinase fa 99.8 6.4E-19 1.4E-23 175.8 10.9 139 419-574 2-168 (190)
416 cd08680 C2_Kibra C2 domain fou 99.8 1.1E-19 2.3E-24 168.9 4.9 100 264-365 12-114 (124)
417 cd08407 C2B_Synaptotagmin-13 C 99.8 2E-19 4.3E-24 170.0 5.0 95 264-360 13-111 (138)
418 cd08406 C2B_Synaptotagmin-12 C 99.8 3.4E-19 7.3E-24 168.3 4.7 95 264-360 13-109 (136)
419 KOG1166 Mitotic checkpoint ser 99.8 3.9E-18 8.4E-23 201.3 13.1 201 406-618 690-901 (974)
420 cd05145 RIO1_like RIO kinase f 99.8 8.9E-18 1.9E-22 167.2 13.8 140 419-575 2-169 (190)
421 PF14531 Kinase-like: Kinase-l 99.7 1.3E-17 2.9E-22 175.0 14.9 206 416-623 14-253 (288)
422 cd04028 C2B_RIM1alpha C2 domai 99.7 1.1E-18 2.3E-23 166.4 5.4 97 264-364 27-126 (146)
423 cd08392 C2A_SLP-3 C2 domain fi 99.7 1.4E-18 3E-23 162.4 5.0 100 264-365 13-115 (128)
424 PRK12274 serine/threonine prot 99.7 3.7E-17 8.1E-22 164.1 15.4 183 417-624 5-211 (218)
425 KOG0603 Ribosomal protein S6 k 99.7 1.7E-18 3.6E-23 192.8 4.8 204 422-645 2-212 (612)
426 cd08381 C2B_PI3K_class_II C2 d 99.7 3.3E-18 7.2E-23 158.6 5.1 98 265-365 12-112 (122)
427 cd08685 C2_RGS-like C2 domain 99.7 3.6E-18 7.8E-23 157.7 4.4 98 264-364 10-109 (119)
428 cd08393 C2A_SLP-1_2 C2 domain 99.7 5.4E-18 1.2E-22 157.8 4.7 100 264-365 13-115 (125)
429 PRK10345 hypothetical protein; 99.7 1.9E-16 4.1E-21 160.4 14.5 139 419-570 7-156 (210)
430 KOG0606 Microtubule-associated 99.7 7.4E-17 1.6E-21 187.3 11.5 180 413-641 82-279 (1205)
431 KOG1240 Protein kinase contain 99.7 2.8E-17 6.2E-22 190.7 7.5 190 415-621 24-240 (1431)
432 cd08408 C2B_Synaptotagmin-14_1 99.7 9E-18 2E-22 159.0 2.8 95 264-360 13-110 (138)
433 cd04029 C2A_SLP-4_5 C2 domain 99.7 2.9E-17 6.2E-22 152.9 5.2 101 264-366 13-116 (125)
434 smart00090 RIO RIO-like kinase 99.7 2.2E-16 4.8E-21 163.0 11.6 144 416-575 30-200 (237)
435 cd08395 C2C_Munc13 C2 domain t 99.6 1.2E-16 2.7E-21 147.5 4.7 97 267-366 1-102 (120)
436 KOG4158 BRPK/PTEN-induced prot 99.6 1.1E-15 2.3E-20 161.7 10.4 144 473-623 273-460 (598)
437 KOG1028 Ca2+-dependent phospho 99.6 2.3E-16 5E-21 174.9 5.2 97 264-364 165-263 (421)
438 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.6 7.5E-16 1.6E-20 149.8 6.3 119 264-386 25-145 (162)
439 cd08409 C2B_Synaptotagmin-15 C 99.6 3.5E-16 7.5E-21 148.0 3.4 93 264-359 13-107 (137)
440 cd08410 C2B_Synaptotagmin-17 C 99.6 3.4E-16 7.3E-21 147.7 3.1 94 264-359 12-107 (135)
441 cd08404 C2B_Synaptotagmin-4 C2 99.6 3.9E-16 8.5E-21 147.3 3.3 96 264-361 13-110 (136)
442 PRK14879 serine/threonine prot 99.6 1.2E-14 2.7E-19 145.9 13.7 132 420-572 2-143 (211)
443 cd08389 C2A_Synaptotagmin-14_1 99.6 1.1E-15 2.5E-20 142.0 5.0 98 264-365 14-113 (124)
444 cd08384 C2B_Rabphilin_Doc2 C2 99.6 1.4E-15 3E-20 142.8 4.9 95 264-360 11-107 (133)
445 cd08388 C2A_Synaptotagmin-4-11 99.6 1.5E-15 3.2E-20 142.0 5.0 98 264-364 14-114 (128)
446 cd08387 C2A_Synaptotagmin-8 C2 99.6 1.5E-15 3.2E-20 140.8 5.0 99 264-366 14-114 (124)
447 cd08521 C2A_SLP C2 domain firs 99.6 2.2E-15 4.8E-20 139.1 5.4 98 264-363 12-112 (123)
448 cd04010 C2B_RasA3 C2 domain se 99.6 2.6E-15 5.5E-20 143.8 5.4 97 267-365 1-110 (148)
449 cd05144 RIO2_C RIO kinase fami 99.6 2.1E-14 4.6E-19 143.6 11.8 138 416-575 17-177 (198)
450 cd04031 C2A_RIM1alpha C2 domai 99.6 3.9E-15 8.5E-20 137.8 6.0 97 264-361 14-112 (125)
451 cd08403 C2B_Synaptotagmin-3-5- 99.5 1.9E-15 4.1E-20 142.2 3.3 95 264-360 12-108 (134)
452 cd08385 C2A_Synaptotagmin-1-5- 99.5 4.3E-15 9.4E-20 137.6 5.3 97 264-364 14-112 (124)
453 cd04030 C2C_KIAA1228 C2 domain 99.5 4E-15 8.8E-20 138.2 5.1 99 264-364 14-116 (127)
454 cd08402 C2B_Synaptotagmin-1 C2 99.5 4.1E-15 8.8E-20 140.3 4.8 95 264-360 13-109 (136)
455 TIGR03724 arch_bud32 Kae1-asso 99.5 7.2E-14 1.6E-18 139.2 12.3 129 421-573 1-139 (199)
456 KOG1028 Ca2+-dependent phospho 99.5 5.1E-15 1.1E-19 164.3 4.4 97 263-361 295-393 (421)
457 cd05119 RIO RIO kinase family, 99.5 5.7E-14 1.2E-18 138.4 11.3 139 419-575 2-166 (187)
458 cd04041 C2A_fungal C2 domain f 99.5 1.1E-14 2.3E-19 132.7 5.2 94 266-363 1-98 (111)
459 cd08405 C2B_Synaptotagmin-7 C2 99.5 1.1E-14 2.3E-19 137.4 4.7 96 264-361 13-110 (136)
460 KOG0195 Integrin-linked kinase 99.5 1.1E-14 2.4E-19 147.5 4.0 204 414-633 190-402 (448)
461 PRK09605 bifunctional UGMP fam 99.5 1.4E-13 3E-18 158.4 13.6 135 414-573 333-477 (535)
462 KOG1023 Natriuretic peptide re 99.5 6.8E-14 1.5E-18 155.9 9.5 197 473-686 4-218 (484)
463 cd08386 C2A_Synaptotagmin-7 C2 99.5 3.4E-14 7.4E-19 131.7 5.8 98 264-364 14-113 (125)
464 cd04009 C2B_Munc13-like C2 dom 99.5 3E-14 6.5E-19 134.0 4.8 99 264-364 14-118 (133)
465 cd05120 APH_ChoK_like Aminogly 99.5 4.4E-13 9.5E-18 124.9 12.4 134 418-572 2-138 (155)
466 cd08682 C2_Rab11-FIP_classI C2 99.5 3.3E-14 7.2E-19 132.3 4.0 89 268-363 1-94 (126)
467 cd04039 C2_PSD C2 domain prese 99.5 4.6E-14 9.9E-19 128.1 4.6 92 266-364 1-97 (108)
468 cd08688 C2_KIAA0528-like C2 do 99.4 6.1E-14 1.3E-18 127.5 4.1 91 268-365 1-95 (110)
469 cd08390 C2A_Synaptotagmin-15-1 99.4 7.9E-14 1.7E-18 128.8 4.7 98 264-365 12-112 (123)
470 cd08401 C2A_RasA2_RasA3 C2 dom 99.4 7.9E-14 1.7E-18 129.1 4.5 89 268-364 2-92 (121)
471 cd04032 C2_Perforin C2 domain 99.4 2.1E-13 4.5E-18 127.2 6.2 90 263-360 25-115 (127)
472 PRK01723 3-deoxy-D-manno-octul 99.4 4.3E-12 9.2E-17 131.3 14.8 133 421-572 38-191 (239)
473 cd08690 C2_Freud-1 C2 domain f 99.4 3.4E-13 7.3E-18 129.8 5.4 92 269-362 5-107 (155)
474 cd04036 C2_cPLA2 C2 domain pre 99.4 3.1E-13 6.7E-18 124.4 4.8 89 268-362 2-91 (119)
475 cd08376 C2B_MCTP_PRT C2 domain 99.4 3.6E-13 7.7E-18 123.2 4.3 88 268-363 2-90 (116)
476 cd04022 C2A_MCTP_PRT_plant C2 99.4 3.7E-13 8.1E-18 125.4 4.5 90 267-363 1-94 (127)
477 cd04018 C2C_Ferlin C2 domain t 99.4 2.9E-13 6.4E-18 129.9 3.8 94 267-367 1-109 (151)
478 cd04025 C2B_RasA1_RasA4 C2 dom 99.4 5.1E-13 1.1E-17 123.6 4.8 90 267-364 1-91 (123)
479 cd04035 C2A_Rabphilin_Doc2 C2 99.4 6.2E-13 1.3E-17 123.1 5.2 98 264-363 13-112 (123)
480 cd00276 C2B_Synaptotagmin C2 d 99.4 2.8E-13 6.2E-18 126.7 2.9 96 264-361 12-109 (134)
481 cd08374 C2F_Ferlin C2 domain s 99.3 5.1E-13 1.1E-17 125.1 4.3 89 268-360 2-119 (133)
482 cd08686 C2_ABR C2 domain in th 99.3 5.4E-13 1.2E-17 122.0 4.3 79 268-356 1-87 (118)
483 KOG1033 eIF-2alpha kinase PEK/ 99.3 4.8E-13 1E-17 147.0 4.7 119 489-615 329-457 (516)
484 KOG1030 Predicted Ca2+-depende 99.3 7.5E-13 1.6E-17 126.3 5.3 84 265-357 5-89 (168)
485 cd04042 C2A_MCTP_PRT C2 domain 99.3 8.1E-13 1.7E-17 122.0 4.5 89 267-363 1-90 (121)
486 cd08379 C2D_MCTP_PRT_plant C2 99.3 6.9E-13 1.5E-17 123.6 3.9 87 268-363 2-98 (126)
487 cd04033 C2_NEDD4_NEDD4L C2 dom 99.3 1.2E-12 2.6E-17 122.7 5.1 95 267-365 1-98 (133)
488 cd04019 C2C_MCTP_PRT_plant C2 99.3 9.5E-13 2.1E-17 126.5 4.5 90 267-364 1-92 (150)
489 cd04016 C2_Tollip C2 domain pr 99.3 1.4E-12 3.1E-17 120.7 5.4 85 266-360 2-88 (121)
490 cd08676 C2A_Munc13-like C2 dom 99.3 1.2E-12 2.5E-17 126.0 4.7 99 264-369 26-149 (153)
491 cd04043 C2_Munc13_fungal C2 do 99.3 1.9E-12 4E-17 120.2 5.4 90 267-361 2-92 (126)
492 cd08375 C2_Intersectin C2 doma 99.3 1.6E-12 3.4E-17 122.9 4.9 94 263-364 12-106 (136)
493 cd04026 C2_PKC_alpha_gamma C2 99.3 2.2E-12 4.7E-17 120.8 5.4 104 264-369 11-115 (131)
494 cd04037 C2E_Ferlin C2 domain f 99.3 2.4E-12 5.3E-17 119.6 5.0 87 268-360 2-89 (124)
495 cd04054 C2A_Rasal1_RasA4 C2 do 99.3 3.1E-12 6.7E-17 118.3 4.9 87 268-362 2-89 (121)
496 cd08681 C2_fungal_Inn1p-like C 99.3 2.8E-12 6.1E-17 117.6 4.5 88 266-362 1-90 (118)
497 cd04011 C2B_Ferlin C2 domain s 99.3 3.3E-12 7.2E-17 116.1 4.9 90 267-365 5-96 (111)
498 cd04017 C2D_Ferlin C2 domain f 99.3 4.5E-12 9.7E-17 119.5 5.8 86 267-357 2-94 (135)
499 cd04024 C2A_Synaptotagmin-like 99.3 3.8E-12 8.3E-17 118.2 4.8 90 266-363 1-93 (128)
500 cd08678 C2_C21orf25-like C2 do 99.2 4.3E-12 9.4E-17 118.1 4.4 87 268-363 1-88 (126)
No 1
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-65 Score=536.68 Aligned_cols=394 Identities=22% Similarity=0.298 Sum_probs=322.4
Q ss_pred CCCccccccccCCCCCcccccceeeccccCCCccCCccccccccccccCCCCCccccCCCCccccceeEEEEecc-Cccc
Q 005415 201 LDKPCLFHIVPLNDDKEVGVTDYYRFEKTNQPEAGGIKEKLKDCAAYGCSEPLCKCCAGEGKINNDYGYLSSKEA-DLID 279 (697)
Q Consensus 201 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~s~~~l~v~l~e~-~L~~ 279 (697)
++++|+.|++|+|+.++|++++... +++.. ..+.|+|.|++| ||.|
T Consensus 148 VH~rCv~nVPslCG~DhtE~RGrl~-----------l~~~~----------------------~~~~l~v~i~ea~NLiP 194 (683)
T KOG0696|consen 148 VHHRCVENVPSLCGTDHTERRGRLY-----------LEAHI----------------------KRDVLTVTIKEAKNLIP 194 (683)
T ss_pred HHHHHhhcCCcccCCcchhhcceEE-----------EEEEe----------------------cCceEEEEehhhccccc
Confidence 4589999999999998888776555 23222 348899999999 9999
Q ss_pred ccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCCCCCCCcccccccCc
Q 005415 280 LQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGK 359 (697)
Q Consensus 280 ~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~~~~~d~~G~v~~~~ 359 (697)
||.||.||||||+.|.||.+.++|+||++.|+||||+|||+|+|+ +...+.++.|.++|||||+.+||||+|.++++.
T Consensus 195 MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~--Lkp~DkdrRlsiEvWDWDrTsRNDFMGslSFgi 272 (683)
T KOG0696|consen 195 MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFK--LKPSDKDRRLSIEVWDWDRTSRNDFMGSLSFGI 272 (683)
T ss_pred cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEe--cccccccceeEEEEecccccccccccceecccH
Confidence 999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred ccccccCCCCcccccchhhHhHhhhhhhhhhh-------------cccCCCcCC-----------CCCcceee-CceecC
Q 005415 360 ADAEEHGVATPDLLMFDNLEEECEIFHLRIIH-------------RKNRTGFEE-----------NKDLPIIL-NTVIAG 414 (697)
Q Consensus 360 ~~~d~e~~~~~~~l~~~~l~ee~e~~~lrii~-------------~~~~~~~~~-----------~~~~pv~~-~~~i~~ 414 (697)
.++.++++.+|..++ .++|-|.+++.+.. ++.+.+... .+.++..- ..+-..
T Consensus 273 sEl~K~p~~GWyKlL---sqeEGEyyNvp~~~~~~e~~~~lr~k~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~d~i~~t 349 (683)
T KOG0696|consen 273 SELQKAPVDGWYKLL---SQEEGEYYNVPVPDEDSEDNEELRQKFERARIGPGSSKPEKKTMPTDSKFHNSSKRDRIKAT 349 (683)
T ss_pred HHHhhcchhhHHHHh---hhhcCceeccCCCCchhhHHHHHHHHHhhcccCCCcCCCCCCCCCCcccCCCCCcccceeec
Confidence 999999999987765 34444544433211 111111100 01111111 122245
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+|..+.+||+|+||+|.+|..+.+.+.+|||+++++- ...+--+.|.++|....+ -|.+++++.+|+..+.
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~k-----ppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-----PPFLVQLHSCFQTMDR 424 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCC-----CchHHHHHHHhhhhhh
Confidence 7899999999999999999999999999999998753 223444566666655443 4799999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
+|+||||+.|+-+-+..+.-.. +.++.+..++.+|+-||-+||++||+.||||.+|||++. .|++||+|||++
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~Gk-----FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~--eGHiKi~DFGmc 497 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGK-----FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGMC 497 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcc-----cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc--CCceEeeecccc
Confidence 9999999987655444332222 788889999999999999999999999999999999996 999999999998
Q ss_pred ccc---ccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 571 CFQ---TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 571 ~~~---~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
... +....+++|||.|+|||++..++|+..+|.||+||+||||+.|++||.+.+..++++.|++---..|..+.
T Consensus 498 KEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslS 574 (683)
T KOG0696|consen 498 KENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLS 574 (683)
T ss_pred cccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccccc
Confidence 653 34456789999999999999999999999999999999999999999999999999999887666665443
No 2
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.5e-48 Score=430.52 Aligned_cols=256 Identities=52% Similarity=0.832 Sum_probs=245.7
Q ss_pred CcCCCCCcceeeCceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCC
Q 005415 397 GFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEH 476 (697)
Q Consensus 397 ~~~~~~~~pv~~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hp 476 (697)
.....+.+.++.++.+..||.|++.||+|+||.|.+|.|..+++.||||++++.+.+..+...|++||..|+...+.+.-
T Consensus 169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~ 248 (586)
T KOG0667|consen 169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY 248 (586)
T ss_pred CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 45567788999999999999999999999999999999999999999999999999999999999999999987777888
Q ss_pred ceeEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc
Q 005415 477 HILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (697)
Q Consensus 477 nIv~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~ 556 (697)
|||+++++|...+|+|||+|.+..+|+++++.++..+ +++..++.++.||+.||.+||+.+|||+||||+|||+..
T Consensus 249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~G----lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~ 324 (586)
T KOG0667|consen 249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRG----LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD 324 (586)
T ss_pred eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc
Confidence 9999999999999999999999999999999888766 999999999999999999999999999999999999998
Q ss_pred cCcceEEEeeCCCccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhh
Q 005415 557 YQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 557 ~~~~~vKL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~l 636 (697)
.....|||+|||+|+........+++++.|+|||+++|.+|+.++||||||||++||++|.+.|+|.+..++++.|++.+
T Consensus 325 ~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~l 404 (586)
T KOG0667|consen 325 PKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVL 404 (586)
T ss_pred CCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHh
Confidence 78889999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcccccccccC
Q 005415 637 GPIDLEMLMQGQEIYKYFTK 656 (697)
Q Consensus 637 g~~p~e~~~~~~~~~~~~~~ 656 (697)
|.||..++..+.+..+||++
T Consensus 405 G~Pp~~mL~~~~~~~kff~~ 424 (586)
T KOG0667|consen 405 GLPPPKMLDTAKKAHKFFTS 424 (586)
T ss_pred CCCCHHHHHhccccceehhc
Confidence 99999999999998998888
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-41 Score=369.44 Aligned_cols=246 Identities=27% Similarity=0.417 Sum_probs=218.9
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEec----chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~----~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
..+|...+.||+|+|+.||.+++..+|+.||+|++.+ .....+...+||+|.+.|+ |||||+++++|++.
T Consensus 17 ~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~------HpnIV~f~~~FEDs 90 (592)
T KOG0575|consen 17 SKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK------HPNIVQFYHFFEDS 90 (592)
T ss_pred cceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC------CCcEEeeeeEeecC
Confidence 3789999999999999999999999999999999986 4556678889999999886 88999999999999
Q ss_pred CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
+.+|||+|+|. ++|.++++..+ .+++.+++.+++||+.||.|||+++|+|||||..|++++. +.+|||+||
T Consensus 91 ~nVYivLELC~~~sL~el~Krrk------~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~--~~~VKIgDF 162 (592)
T KOG0575|consen 91 NNVYIVLELCHRGSLMELLKRRK------PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNE--NMNVKIGDF 162 (592)
T ss_pred CceEEEEEecCCccHHHHHHhcC------CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecC--cCcEEeccc
Confidence 99999999998 55666665322 2999999999999999999999999999999999999995 889999999
Q ss_pred CCccccc---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 568 GSSCFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 568 Gla~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
|+|.... ....+.+|||.|.|||++...+++..+||||+||+||.||.|++||...+..+.+.+|...--
T Consensus 163 GLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y------- 235 (592)
T KOG0575|consen 163 GLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY------- 235 (592)
T ss_pred ceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc-------
Confidence 9998765 456778999999999999999999999999999999999999999999999999999854322
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
..+..+.....+...+++...|..|+++++++ .|+
T Consensus 236 ----------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 236 ----------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred ----------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 22235667778889999999999999999999 887
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-42 Score=360.17 Aligned_cols=257 Identities=27% Similarity=0.383 Sum_probs=209.8
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh--------hhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--------FFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~--------~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~ 483 (697)
+...|.+.+.||+|+||.|-+|..+.+|+.||||++++... ......+|++||+.|+ |||||++++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~------HP~IV~~~d 243 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS------HPNIVRIKD 243 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC------CCCEEEEee
Confidence 55679999999999999999999999999999999985321 2234578999999986 889999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc-Ccce
Q 005415 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY-QRCE 561 (697)
Q Consensus 484 ~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~-~~~~ 561 (697)
+|...+..||||||++ |.|.+.+..+.. +.+...+.+++||+.||.|||++||+||||||+|||+..+ .+..
T Consensus 244 ~f~~~ds~YmVlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~l 317 (475)
T KOG0615|consen 244 FFEVPDSSYMVLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCL 317 (475)
T ss_pred eeecCCceEEEEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceE
Confidence 9999999999999998 567777765554 6777889999999999999999999999999999999864 5689
Q ss_pred EEEeeCCCccccc--cccccccccCCCCCchhhcCCCC---CchhhHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHh
Q 005415 562 IKIIDLGSSCFQT--DNLCLYVQSRSYRAPEVIIGLPY---DQKIDLWSLGCILAELWTGEVLFPNDAVVM-ILARIIGM 635 (697)
Q Consensus 562 vKL~DFGla~~~~--~~~~~~~gt~~Y~APE~l~~~~~---s~ksDIWSLGviL~ELltG~~PF~~~~~~e-~l~~I~~~ 635 (697)
+||+|||+|+..+ .-..+.+|||.|.|||++.++++ ..++|||||||+||-+++|.+||.+..... ...+|.+.
T Consensus 318 lKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G 397 (475)
T KOG0615|consen 318 LKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG 397 (475)
T ss_pred EEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC
Confidence 9999999998874 34567899999999999987763 347899999999999999999998765544 44444332
Q ss_pred hCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 636 lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.-.+-+.. | .....-..+...++++--|.+|.++++|+ ||+...+
T Consensus 398 ~y~f~p~~----------w---~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 398 RYAFGPLQ----------W---DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred cccccChh----------h---hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 21111111 1 13444556777888888899999999999 9998654
No 5
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.6e-41 Score=345.21 Aligned_cols=260 Identities=25% Similarity=0.348 Sum_probs=220.1
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++|+.+.++|+|+||.||+++++.+|+.||||.+..++ ....-.++||++|++++ |+|+|.++.+|.....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLk------H~NLVnLiEVFrrkrk 75 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLK------HENLVNLIEVFRRKRK 75 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcc------cchHHHHHHHHHhcce
Confidence 57889999999999999999999999999999997543 34456789999999996 7899999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
+++|+|||+.++++.+...... ++...+..++.|++.|+.|+|+++++||||||+||||+. .+.+||||||+|
T Consensus 76 lhLVFE~~dhTvL~eLe~~p~G-----~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~--~gvvKLCDFGFA 148 (396)
T KOG0593|consen 76 LHLVFEYCDHTVLHELERYPNG-----VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ--NGVVKLCDFGFA 148 (396)
T ss_pred eEEEeeecchHHHHHHHhccCC-----CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEec--CCcEEeccchhh
Confidence 9999999999988888766543 889999999999999999999999999999999999995 899999999999
Q ss_pred cccc---cccccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 571 CFQT---DNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 571 ~~~~---~~~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
+... +..+.++.|++|+|||.+.| ..|+..+||||+||++.||++|++.|++.++.+++..|+..+|+.+++-..-
T Consensus 149 R~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~i 228 (396)
T KOG0593|consen 149 RTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSI 228 (396)
T ss_pred HhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHH
Confidence 8765 34566888999999999998 5799999999999999999999999999999999999999999988865441
Q ss_pred cc--------ccccc------ccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 647 GQ--------EIYKY------FTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 647 ~~--------~~~~~------~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
-. .++.. -.+-+.+.....+-.+.-+..-|..|++.++++
T Consensus 229 F~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 229 FSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred hccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence 11 11111 011123344555556666667789999999988
No 6
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.7e-41 Score=335.88 Aligned_cols=265 Identities=30% Similarity=0.422 Sum_probs=226.6
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~---~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
.||...++||+|.||.||+|+|..+|+.||||.++..+. .....++||+.|++++ |+||+.++++|.+.+.
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~------h~nIi~LiD~F~~~~~ 75 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELK------HPNIIELIDVFPHKSN 75 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHcc------CcchhhhhhhccCCCc
Confidence 478899999999999999999999999999999986432 2457789999999986 7899999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
+.||+||++.+|...++.... .++...+..++.++++||+|||++.|+||||||.|+||++ +|.+||+|||++
T Consensus 76 l~lVfEfm~tdLe~vIkd~~i-----~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~--~g~lKiADFGLA 148 (318)
T KOG0659|consen 76 LSLVFEFMPTDLEVVIKDKNI-----ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS--DGQLKIADFGLA 148 (318)
T ss_pred eEEEEEeccccHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC--CCcEEeecccch
Confidence 999999999999988875443 4999999999999999999999999999999999999996 999999999999
Q ss_pred ccccccc---ccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 571 CFQTDNL---CLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 571 ~~~~~~~---~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
+...... ...+-|++|+|||.+.|.. |+..+||||+|||+.||+.|.+.|+|.++.+++..|.+.+|.|..+.|+.
T Consensus 149 r~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~ 228 (318)
T KOG0659|consen 149 RFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPE 228 (318)
T ss_pred hccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcc
Confidence 8876543 2346799999999999865 99999999999999999999999999999999999999999999998887
Q ss_pred ccccccccc----CCchhh-------hhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 647 GQEIYKYFT----KEYDLY-------YINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 647 ~~~~~~~~~----~~~~l~-------~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
...++.|-. ..+.+. +-..+...+++.--|..|+++.|++ +|++.
T Consensus 229 ~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 229 MTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred ccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 666555422 111111 2224555666666688899999999 77764
No 7
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=352.49 Aligned_cols=295 Identities=34% Similarity=0.553 Sum_probs=261.0
Q ss_pred cccCCCcCCCCCcceeeCceec-CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhccc
Q 005415 392 RKNRTGFEENKDLPIILNTVIA-GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKN 470 (697)
Q Consensus 392 ~~~~~~~~~~~~~pv~~~~~i~-~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~ 470 (697)
.+....|..+++|||.+|+.+. +||.+.++||.|-|++||+|.|..+.+.||+|+++....+.+..++||++|+.++..
T Consensus 55 qE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~ 134 (590)
T KOG1290|consen 55 QEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREG 134 (590)
T ss_pred ccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhc
Confidence 3455678889999999999998 999999999999999999999999999999999999888889999999999999987
Q ss_pred C--CCCCCceeEEEEEEEe----cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCcc
Q 005415 471 D--PADEHHILRLYDYFYH----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGII 543 (697)
Q Consensus 471 ~--~~~hpnIv~l~~~f~~----~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIv 543 (697)
. ..+..+||+|++.|.. +.|+++|+|+++.+|+.+++.....+ +++..++.|++||+.||.|||. +|||
T Consensus 135 Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrG----lpl~~VK~I~~qvL~GLdYLH~ecgII 210 (590)
T KOG1290|consen 135 DPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRG----LPLSCVKEICRQVLTGLDYLHRECGII 210 (590)
T ss_pred CCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCC----CcHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 6 4455689999999985 47899999999999999999887766 9999999999999999999996 6999
Q ss_pred ccCCCCcccccccc------------------------------------------------------------------
Q 005415 544 HCDLKPENILIKSY------------------------------------------------------------------ 557 (697)
Q Consensus 544 HrDLKP~NILl~~~------------------------------------------------------------------ 557 (697)
|-||||+|||+...
T Consensus 211 HTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~ 290 (590)
T KOG1290|consen 211 HTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAG 290 (590)
T ss_pred ccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcc
Confidence 99999999997300
Q ss_pred ----------------------------------------------C---------------------------------
Q 005415 558 ----------------------------------------------Q--------------------------------- 558 (697)
Q Consensus 558 ----------------------------------------------~--------------------------------- 558 (697)
.
T Consensus 291 ~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s 370 (590)
T KOG1290|consen 291 LEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSS 370 (590)
T ss_pred cccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCC
Confidence 0
Q ss_pred -------------------cceEEEeeCCCccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Q 005415 559 -------------------RCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVL 619 (697)
Q Consensus 559 -------------------~~~vKL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~P 619 (697)
+.++||+|||.|++.....+.-++|+.|+|||++.|.+|++.+||||++|++|||+||...
T Consensus 371 ~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyL 450 (590)
T KOG1290|consen 371 PGTIASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYL 450 (590)
T ss_pred ccccccccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCcee
Confidence 0147999999999999988888999999999999999999999999999999999999999
Q ss_pred CCCC------cHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHh------------------
Q 005415 620 FPND------AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISL------------------ 675 (697)
Q Consensus 620 F~~~------~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~------------------ 675 (697)
|... .++++++.|++++|.+|..+...++..+.||++.++|++|-+.....++.-+
T Consensus 451 FePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL 530 (590)
T KOG1290|consen 451 FEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFL 530 (590)
T ss_pred ecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9543 4689999999999999999999999999999999988887654433332222
Q ss_pred -------hhhccCHHHHH--Hhhc
Q 005415 676 -------VVIRLTLEYAA--LWLF 690 (697)
Q Consensus 676 -------~~~r~t~e~~~--~wl~ 690 (697)
|.+|.|+.+.+ |||+
T Consensus 531 ~PmLef~PeKR~tA~~cl~hPwLn 554 (590)
T KOG1290|consen 531 SPMLEFDPEKRPTAAQCLKHPWLN 554 (590)
T ss_pred HHHHhcCccccccHHHHhcCcccc
Confidence 66799999999 9998
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=347.95 Aligned_cols=254 Identities=28% Similarity=0.420 Sum_probs=211.6
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
..+|++++.||+|+||+||+++.+.+++.+|+|++++.. ...++..+|..||..++ ||+||.++..|++.
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~------hPFiv~l~ysFQt~ 97 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK------HPFIVKLIYSFQTE 97 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC------CCcEeeeEEecccC
Confidence 468999999999999999999999999999999998643 34567888999998864 89999999999999
Q ss_pred CeEEEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
..+|+|+||+.|+ |.-.++.... +++..++-++.+|+.||.|||++|||||||||+|||++. .|+++|+||
T Consensus 98 ~kLylVld~~~GGeLf~hL~~eg~------F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~--~GHi~LtDF 169 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQREGR------FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDE--QGHIKLTDF 169 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhcCC------cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecC--CCcEEEecc
Confidence 9999999999864 5544443322 999999999999999999999999999999999999995 999999999
Q ss_pred CCccccc---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 568 GSSCFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 568 Gla~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
|+|+..- ....+++||+.|||||++.+.+|+..+|.||||+++|||++|.+||.+.+......+|.....+.++.
T Consensus 170 gL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~-- 247 (357)
T KOG0598|consen 170 GLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG-- 247 (357)
T ss_pred ccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc--
Confidence 9997532 34556899999999999999999999999999999999999999999999999999997655322221
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhcc----CHHHHH--HhhcccCCCC
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRL----TLEYAA--LWLFGIDQNK 696 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~----t~e~~~--~wl~~~~~n~ 696 (697)
-+..-+++....++..-+..|+ ..+.+. ++...++|++
T Consensus 248 --------------~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~ 291 (357)
T KOG0598|consen 248 --------------YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEK 291 (357)
T ss_pred --------------cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHH
Confidence 2334555666667777777775 344444 7777776653
No 9
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-41 Score=349.65 Aligned_cols=252 Identities=27% Similarity=0.375 Sum_probs=211.3
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEe--cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC-
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK--NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE- 489 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~--~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~- 489 (697)
..+.+.++.||+|+.|+||+++++.+++.+|+|++. .+.....++.+|++|++.++ ||+||.+|+.|.+..
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~------spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQ------SPYIVGFYGAFYSNGE 151 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCC------CCCeeeEeEEEEeCCc
Confidence 356777889999999999999999999999999994 45667789999999999884 789999999999998
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEeeC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
.+.|+||||++ +|..+++..+. +++..+..|+.++++||.|||+ ++||||||||+|||+++ .|.||||||
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~g~------i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs--kGeVKicDF 223 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRVGR------IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS--KGEVKICDF 223 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc--CCCEEeccc
Confidence 59999999985 56666554322 8999999999999999999995 89999999999999996 999999999
Q ss_pred CCcccccccc-ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----cHHHHHHHHHHhhCCCCH
Q 005415 568 GSSCFQTDNL-CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND-----AVVMILARIIGMLGPIDL 641 (697)
Q Consensus 568 Gla~~~~~~~-~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~-----~~~e~l~~I~~~lg~~p~ 641 (697)
|.+....... .+++||..|||||.+.+..|+.++||||||++++|+++|+.||+.. +..+++..|+. .+|+
T Consensus 224 GVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~---~ppP 300 (364)
T KOG0581|consen 224 GVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD---EPPP 300 (364)
T ss_pred cccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc---CCCC
Confidence 9997765554 6789999999999999999999999999999999999999999874 44555555533 2332
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
..-.. ...+++..+...|.++. +.+|.++++++ +||...+
T Consensus 301 ~lP~~--------~fS~ef~~FV~~CL~Kd----p~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 301 RLPEG--------EFSPEFRSFVSCCLRKD----PSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred CCCcc--------cCCHHHHHHHHHHhcCC----cccCCCHHHHhcCHHHhhcc
Confidence 22110 13347788888887765 89999999999 9998654
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=348.75 Aligned_cols=211 Identities=31% Similarity=0.497 Sum_probs=188.5
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.++|.+.+.||+|+||+||+|+++.++..||||.+.+. +...+....|++||+.++ |||||++++++...+
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~------H~nIV~l~d~~~~~~ 82 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK------HPNIVRLLDCIEDDD 82 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC------CcceeeEEEEEecCC
Confidence 47899999999999999999999999999999998754 445677789999999996 889999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc-Cc---ceEEE
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY-QR---CEIKI 564 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~-~~---~~vKL 564 (697)
.+|+|||||. |+|..++..... +++..++.++.||+.||++||+++||||||||.||||... .. -.+||
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~~------l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKI 156 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRGR------LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKI 156 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEe
Confidence 9999999998 567777765543 8999999999999999999999999999999999999863 22 57899
Q ss_pred eeCCCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Q 005415 565 IDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 565 ~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~ 635 (697)
+|||+|+..... ..+.+|++.|||||++....|+.|+|+||+|+|||+|++|++||...+..+.+..+.+.
T Consensus 157 ADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~ 229 (429)
T KOG0595|consen 157 ADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG 229 (429)
T ss_pred cccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc
Confidence 999999887644 45689999999999999999999999999999999999999999999999988877543
No 11
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=362.32 Aligned_cols=263 Identities=30% Similarity=0.446 Sum_probs=221.6
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhH--hHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD--QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~--~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
+.+||+++++||.|.||.||+|+.+.++..||||.+++.-...+ .-++|++.|++++. ||||++|..++.+.+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~-----hpniikL~Evi~d~~ 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNP-----HPNIIKLKEVIRDND 82 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCC-----CCcchhhHHHhhccC
Confidence 45799999999999999999999999999999999986432222 34678888888763 899999999999887
Q ss_pred -eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 -HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 -~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+|+|||||..+|+++++.+.+ +|++..++.|+.||++||+|+|.+|+.||||||+|||+.. ...+||+|||
T Consensus 83 ~~L~fVfE~Md~NLYqLmK~R~r-----~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDFG 155 (538)
T KOG0661|consen 83 RILYFVFEFMDCNLYQLMKDRNR-----LFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG--NDVIKIADFG 155 (538)
T ss_pred ceEeeeHHhhhhhHHHHHhhcCC-----cCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--cceeEecccc
Confidence 9999999999999999986533 3999999999999999999999999999999999999995 7789999999
Q ss_pred Ccccccc--ccccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 569 SSCFQTD--NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 569 la~~~~~--~~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
+|+.... ..+.++.|++|+|||+++.. .|+.++||||+|||++|+.+-++.|+|.++.+++.+|.+.+|.|..+.+.
T Consensus 156 LARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 156 LAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred cccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 9987654 45668999999999998765 58999999999999999999999999999999999999999999998877
Q ss_pred hcccccc------cccCCchhhhhH-------HHHHHHHHHHhhhhccCHHHHH
Q 005415 646 QGQEIYK------YFTKEYDLYYIN-------EVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 646 ~~~~~~~------~~~~~~~l~~i~-------~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
.+..... .......+..++ .....++..+-|.+|.|+++++
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al 289 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQAL 289 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHh
Confidence 6533221 112223333333 3445566667789999999998
No 12
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-40 Score=357.65 Aligned_cols=264 Identities=28% Similarity=0.431 Sum_probs=223.3
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
-...|+.+++||+|.||.||+|++..+|+.||+|.++.+ ..+.....+||+||+.|. ||||++|.+...+.
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~------HpNIikL~eivt~~ 188 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLD------HPNIIKLEEIVTSK 188 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcC------CCcccceeeEEEec
Confidence 346799999999999999999999999999999999854 455667889999999986 88999999999987
Q ss_pred --CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 489 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 489 --~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
..+|||+|||+.+|.-++.... ..|++.++..+++||+.||.|+|++||+|||||.+||||+. +|.+||+|
T Consensus 189 ~~~siYlVFeYMdhDL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn--~G~LKiaD 261 (560)
T KOG0600|consen 189 LSGSIYLVFEYMDHDLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDN--NGVLKIAD 261 (560)
T ss_pred CCceEEEEEecccchhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcC--CCCEEecc
Confidence 6899999999999887775432 33999999999999999999999999999999999999995 99999999
Q ss_pred CCCccccccc----cccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 567 LGSSCFQTDN----LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 567 FGla~~~~~~----~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
||+|++.... .+..+-|.+|+|||+++|.. |+.++|+||+||||.||++|++.|++.++.+++.+|.+.+|.|..
T Consensus 262 FGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e 341 (560)
T KOG0600|consen 262 FGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTE 341 (560)
T ss_pred ccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCCh
Confidence 9999865432 45567899999999999874 999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccc--ccccCC-----------chhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 642 EMLMQGQEIY--KYFTKE-----------YDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 642 e~~~~~~~~~--~~~~~~-----------~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
+.|. ..+++ ..|... ..+..-..+....++..-|..|.|+++++ .|+
T Consensus 342 ~~W~-~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 342 DYWP-VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred hccc-cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 9887 22222 111111 12223445566667777788899999998 666
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-40 Score=354.67 Aligned_cols=252 Identities=27% Similarity=0.407 Sum_probs=220.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.+|...+.||.|+|++|++|.++.+++.||||++.+. .....-...|..+|..|. +||.|++||-.|+++.
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-----~hPgivkLy~TFQD~~ 147 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-----GHPGIVKLYFTFQDEE 147 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-----CCCCeEEEEEEeeccc
Confidence 6799999999999999999999999999999998753 223355667888888886 5899999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+|+|+||++ |.|+++++.... |++...+.++.||+.||+|||++|||||||||+|||++. ++++||+|||
T Consensus 148 sLYFvLe~A~nGdll~~i~K~Gs------fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~--dmhikITDFG 219 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYGS------FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDK--DGHIKITDFG 219 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhCc------chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcC--CCcEEEeecc
Confidence 9999999997 678888876543 899999999999999999999999999999999999995 9999999999
Q ss_pred Cccccccc----------------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Q 005415 569 SSCFQTDN----------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARI 632 (697)
Q Consensus 569 la~~~~~~----------------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I 632 (697)
.|..+... ...++||..|.+||++..+..++.+|||+||||||+|+.|.+||.+.++.-++++|
T Consensus 220 sAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI 299 (604)
T KOG0592|consen 220 SAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKI 299 (604)
T ss_pred ccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 98764321 14489999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCC
Q 005415 633 IGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQN 695 (697)
Q Consensus 633 ~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n 695 (697)
+...-.+|. ...+..++..+.+++.-|..|+|.+++. ++..+.+|+
T Consensus 300 ~~l~y~fp~-----------------~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~ 347 (604)
T KOG0592|consen 300 QALDYEFPE-----------------GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWE 347 (604)
T ss_pred HHhcccCCC-----------------CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChh
Confidence 886554443 4447888999999999999999999999 666665554
No 14
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=335.48 Aligned_cols=270 Identities=26% Similarity=0.356 Sum_probs=228.1
Q ss_pred CceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 409 ~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
+..-...|+.+..|+.|+||.||+|+|+.+++.||+|.++.+. .+.-..++||.+|..++ |||||.+-.+.
T Consensus 71 gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~------H~NIV~vkEVV 144 (419)
T KOG0663|consen 71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR------HPNIVEVKEVV 144 (419)
T ss_pred CcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC------CCCeeeeEEEE
Confidence 3444567999999999999999999999999999999998653 23446789999998875 88999999888
Q ss_pred Eec--CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 486 YHL--EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 486 ~~~--~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
... +.+|||||||+.+|..++..... +|...+++.++.|+++||.|||.+.|+||||||+|+|++. .|.+|
T Consensus 145 vG~~~d~iy~VMe~~EhDLksl~d~m~q-----~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~--~G~lK 217 (419)
T KOG0663|consen 145 VGSNMDKIYIVMEYVEHDLKSLMETMKQ-----PFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSH--KGILK 217 (419)
T ss_pred eccccceeeeeHHHHHhhHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeecc--CCcEE
Confidence 744 67999999999999999886652 3899999999999999999999999999999999999995 89999
Q ss_pred EeeCCCccccccc---cccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 564 IIDLGSSCFQTDN---LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 564 L~DFGla~~~~~~---~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|+|||+|+..+.. .+..+-|.+|+|||.+++.. |+.++|+||+|||+.||+++++.|+|.+..+++.+|...+|.|
T Consensus 218 iaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtP 297 (419)
T KOG0663|consen 218 IADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTP 297 (419)
T ss_pred ecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCC
Confidence 9999999988776 55567799999999999875 9999999999999999999999999999999999999999999
Q ss_pred CHHHHhhccccc----------------ccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 640 DLEMLMQGQEIY----------------KYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 640 p~e~~~~~~~~~----------------~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
....|+.-.... +-|.. ..+..---+....++.-.|..|+|+++++ .|....
T Consensus 298 te~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~-~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 298 SEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGA-LSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred ccccCCCccccchhhccccCCCCchhhhhhccc-cccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 988776432221 00111 11334445667778888899999999999 787653
No 15
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=327.78 Aligned_cols=215 Identities=27% Similarity=0.462 Sum_probs=195.9
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.+|++++.||.|+||.|.+++.+.+|..+|+|++.+.. ...++..+|..+|+.+. ||+++++++.|.+.+
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~------~PFlv~l~~t~~d~~ 117 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS------HPFLVKLYGTFKDNS 117 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc------CceeEEEEEeeccCC
Confidence 57999999999999999999999999999999998643 45567788999998875 899999999999999
Q ss_pred eEEEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+|+||||++|+ |..+++..++ ++++.++-++.||+.||+|||+++|++|||||+|||++. +|.+||+|||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~--~G~iKitDFG 189 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ--NGHIKITDFG 189 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc--CCcEEEEecc
Confidence 999999999864 6666654433 999999999999999999999999999999999999995 9999999999
Q ss_pred CccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 569 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 569 la~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
+|+.......+.+|||.|+|||++..++|..++|.|||||++|||+.|.+||.+.++..++.+|++..-.+|..
T Consensus 190 FAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~ 263 (355)
T KOG0616|consen 190 FAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSY 263 (355)
T ss_pred ceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcc
Confidence 99998888888999999999999999999999999999999999999999999999999999998877666653
No 16
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.3e-38 Score=343.22 Aligned_cols=255 Identities=26% Similarity=0.387 Sum_probs=205.4
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
.++|.+++.||+|+||.||+|+.+.+|..+|+|+++++. ........|..||... +.|+||+||..|++.
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~------ds~~vVKLyYsFQD~ 213 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV------DSPWVVKLYYSFQDK 213 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc------CCCcEEEEEEEecCC
Confidence 468999999999999999999999999999999998753 4456777788888774 367999999999999
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
..+||||||++| ++..++..... +++..++.++.+++.|+..||+.|+|||||||+|+||+. .|++||+||
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~~------L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~--~GHiKLSDF 285 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKDT------LTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDA--KGHIKLSDF 285 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcCc------CchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecC--CCCEeeccc
Confidence 999999999985 45555553332 899999999999999999999999999999999999995 999999999
Q ss_pred CCcccccc------------------------cc--------------------------ccccccCCCCCchhhcCCCC
Q 005415 568 GSSCFQTD------------------------NL--------------------------CLYVQSRSYRAPEVIIGLPY 597 (697)
Q Consensus 568 Gla~~~~~------------------------~~--------------------------~~~~gt~~Y~APE~l~~~~~ 597 (697)
|+|.-... .. ...+|||.|+|||++.+++|
T Consensus 286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY 365 (550)
T KOG0605|consen 286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY 365 (550)
T ss_pred cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC
Confidence 98732100 00 01488999999999999999
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhh--CCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHh
Q 005415 598 DQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML--GPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISL 675 (697)
Q Consensus 598 s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~l--g~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~ 675 (697)
+..+|.||||||+||||.|-+||.+.++.+.+.+|+... -+.|.+. .+..-..+....++. -
T Consensus 366 ~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~---------------~~s~eA~DLI~rll~-d 429 (550)
T KOG0605|consen 366 GKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEV---------------DLSDEAKDLITRLLC-D 429 (550)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcC---------------cccHHHHHHHHHHhc-C
Confidence 999999999999999999999999999999999997533 2222211 111222233333333 3
Q ss_pred hhhccC---HHHHH--HhhcccCCCCC
Q 005415 676 VVIRLT---LEYAA--LWLFGIDQNKI 697 (697)
Q Consensus 676 ~~~r~t---~e~~~--~wl~~~~~n~~ 697 (697)
+..|+- .+++. ||..+++|++|
T Consensus 430 ~~~RLG~~G~~EIK~HPfF~~v~W~~l 456 (550)
T KOG0605|consen 430 PENRLGSKGAEEIKKHPFFKGVDWDHL 456 (550)
T ss_pred HHHhcCcccHHHHhcCCccccCCcchh
Confidence 455554 67777 99999999976
No 17
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-39 Score=333.13 Aligned_cols=266 Identities=33% Similarity=0.515 Sum_probs=224.1
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH- 487 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~---~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~- 487 (697)
+..+|..++.||.|+||.|+.|.++.+|+.||||.+.. ......+..+|+++|+.++ |+||+.+++.+..
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~------HeNIi~l~di~~p~ 93 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR------HENIIGLLDIFRPP 93 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc------CCCcceEEeecccc
Confidence 34667778999999999999999999999999999873 4455678889999999986 7799999999986
Q ss_pred ----cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 488 ----LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 488 ----~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
-+.+|+|+|+|+.+|...++..+. ++...++.++.||+.||.|+|+.+|+||||||.|+|++. ++.+|
T Consensus 94 ~~~~f~DvYiV~elMetDL~~iik~~~~------L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~--~c~lK 165 (359)
T KOG0660|consen 94 SRDKFNDVYLVFELMETDLHQIIKSQQD------LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNA--DCDLK 165 (359)
T ss_pred cccccceeEEehhHHhhHHHHHHHcCcc------ccHHHHHHHHHHHHHhcchhhcccccccccchhheeecc--CCCEE
Confidence 256999999999999998886554 889999999999999999999999999999999999996 89999
Q ss_pred EeeCCCccccc-----cccccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 564 IIDLGSSCFQT-----DNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 564 L~DFGla~~~~-----~~~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
|+|||+|+... ...+.++.|.+|+|||++.. ..|+.++||||+|||+.||++|++.|+|.+..+++..|++.+|
T Consensus 166 I~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lG 245 (359)
T KOG0660|consen 166 ICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLG 245 (359)
T ss_pred eccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcC
Confidence 99999998874 33466788999999999865 4699999999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcc--cccccccCC------------chhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 638 PIDLEMLMQGQ--EIYKYFTKE------------YDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 638 ~~p~e~~~~~~--~~~~~~~~~------------~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
.|+.+.+..-. ....|.... +...+...+....++.--|..|.|+++|+ |++..
T Consensus 246 tP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 246 TPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred CCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 99998776532 222232221 12234445666666777788899999999 77764
No 18
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=337.65 Aligned_cols=287 Identities=34% Similarity=0.541 Sum_probs=247.6
Q ss_pred CCCCcceeeCceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCcee
Q 005415 400 ENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHIL 479 (697)
Q Consensus 400 ~~~~~pv~~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv 479 (697)
..+.+-...++.+.+||+|+.+||+|.||.|-.+.|..++..||||+++.-....+..+-|+++|++++...+.+---++
T Consensus 75 ~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv 154 (415)
T KOG0671|consen 75 KDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCV 154 (415)
T ss_pred CCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEE
Confidence 34445678899999999999999999999999999999999999999999888889999999999999988777777899
Q ss_pred EEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc--
Q 005415 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY-- 557 (697)
Q Consensus 480 ~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~-- 557 (697)
++.++|...++.+||+|.++-++.+++..+.... ++...++.|++|+++++++||+.+++|-||||+|||+.+.
T Consensus 155 ~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~----fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~ 230 (415)
T KOG0671|consen 155 QMRDWFDYRGHICIVFELLGLSTFDFLKENNYIP----FPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEY 230 (415)
T ss_pred eeehhhhccCceEEEEeccChhHHHHhccCCccc----cchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccce
Confidence 9999999999999999999999999998766543 9999999999999999999999999999999999998531
Q ss_pred ----------------CcceEEEeeCCCccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005415 558 ----------------QRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFP 621 (697)
Q Consensus 558 ----------------~~~~vKL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~ 621 (697)
....|+|+|||.|.......+..+.|..|+|||++++.+|+.++||||+||||+|+.||...|+
T Consensus 231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred EEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 1346899999999998888888999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhhCCCCHHHHhhcccccccc--------------------cCCchhhhhH----------HHHHHHH
Q 005415 622 NDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF--------------------TKEYDLYYIN----------EVCFANI 671 (697)
Q Consensus 622 ~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~--------------------~~~~~l~~i~----------~~cw~~l 671 (697)
+.++.++++.|...+||+|..++.+.. ..+|| +.+-.+...| -+....+
T Consensus 311 tHen~EHLaMMerIlGp~P~~mi~r~~-~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~m 389 (415)
T KOG0671|consen 311 THENLEHLAMMERILGPIPSRMIKKTR-KEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRM 389 (415)
T ss_pred cCCcHHHHHHHHHhhCCCcHHHhhhhh-hHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHH
Confidence 999999999999999999999987662 11222 2222233232 2344445
Q ss_pred HHHhhhhccCHHHHH--Hhhcc
Q 005415 672 FISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 672 ~~~~~~~r~t~e~~~--~wl~~ 691 (697)
+.=.|..|.|+.+|+ +|.+.
T Consensus 390 L~fDP~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 390 LEFDPARRITLREALSHPFFAR 411 (415)
T ss_pred HccCccccccHHHHhcCHHhhc
Confidence 555588899999999 88764
No 19
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3e-37 Score=347.77 Aligned_cols=274 Identities=27% Similarity=0.444 Sum_probs=224.7
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-CeE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-EHL 491 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~-~~l 491 (697)
.++|+++++||+|+||+||+|.+..+++.||||+++...........|+.+++.+++....+|++|++++++|... .+.
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 5789999999999999999999999999999999986555555677899999999888777888999999999865 579
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccC------------
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQ------------ 558 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~------------ 558 (697)
++|||+++++|.+++.... .+++..+..++.||+.||.|||+ .|||||||||+|||++..+
T Consensus 208 ~iv~~~~g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 208 CIVMPKYGPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred EEEEeccCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 9999999998888776432 28899999999999999999998 5999999999999998522
Q ss_pred --cceEEEeeCCCccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhh
Q 005415 559 --RCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 559 --~~~vKL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~l 636 (697)
.+.+||+|||.+..........+||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+++..|.+.+
T Consensus 282 ~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~ 361 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL 361 (467)
T ss_pred CCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence 135999999998766555666789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhcc--cccccccCCch------------------h-----hhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 637 GPIDLEMLMQGQ--EIYKYFTKEYD------------------L-----YYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 637 g~~p~e~~~~~~--~~~~~~~~~~~------------------l-----~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
|++|.++...+. ....++..... + .....+....++...|..|+|+++++ +|+
T Consensus 362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~ 441 (467)
T PTZ00284 362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441 (467)
T ss_pred CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence 999988765321 11111111100 0 11223455556666688899999999 999
Q ss_pred ccc
Q 005415 690 FGI 692 (697)
Q Consensus 690 ~~~ 692 (697)
..+
T Consensus 442 ~~~ 444 (467)
T PTZ00284 442 LKY 444 (467)
T ss_pred ccc
Confidence 864
No 20
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.7e-38 Score=326.46 Aligned_cols=260 Identities=32% Similarity=0.469 Sum_probs=210.0
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--C---
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E--- 489 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--~--- 489 (697)
.|.-.+++|+|+||.||+|....+++.||||.+-.++... .+|+.||+.+ +|||||++.-+|... .
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l------~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKL------DHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhc------CCcCeeeEEEEEEecCCCchh
Confidence 5888999999999999999999999999999988766533 3688888855 589999999999854 2
Q ss_pred eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 490 ~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.+.+||||++.+|.+.++..... ...++...++.++.||++||.|||+.||+||||||.|+|++. +.+.+||+|||+
T Consensus 96 ~lnlVleymP~tL~~~~r~~~~~--~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~-~tg~LKicDFGS 172 (364)
T KOG0658|consen 96 YLNLVLEYMPETLYRVIRHYTRA--NQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP-DTGVLKICDFGS 172 (364)
T ss_pred HHHHHHHhchHHHHHHHHHHhhc--CCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC-CCCeEEeccCCc
Confidence 35789999999999998753222 222788889999999999999999999999999999999997 679999999999
Q ss_pred cccccc--ccccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 570 SCFQTD--NLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 570 a~~~~~--~~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
|+.... ....+..|+.|+|||.+.|.. |+.++||||.||++.||+-|++.|+|++..+++..|++++|.|+.+.+..
T Consensus 173 AK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 173 AKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred ceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 987543 345578899999999999864 99999999999999999999999999999999999999999999998875
Q ss_pred cccccc----------cccC--CchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 647 GQEIYK----------YFTK--EYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 647 ~~~~~~----------~~~~--~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
....+. .|.+ ...+..-..+...+++.=-|..|.++-+++
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 433211 1111 011112223333444445577899888877
No 21
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=6.4e-37 Score=322.35 Aligned_cols=263 Identities=26% Similarity=0.378 Sum_probs=215.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.++||.|+||.||+|.+..+++.||+|+++... .......+|+.+++.++ ||||+++++++......
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 78 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLK------HANIVTLHDIIHTERCL 78 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCC------CCCEeeEEEEEcCCCeE
Confidence 57999999999999999999999999999999987432 22346678999888874 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++. ++.+||+|||++.
T Consensus 79 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~DfG~~~ 151 (288)
T cd07871 79 TLVFEYLDSDLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE--KGELKLADFGLAR 151 (288)
T ss_pred EEEEeCCCcCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEECcCccee
Confidence 99999999988887754322 2788899999999999999999999999999999999985 7889999999986
Q ss_pred ccccc---cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.+.++.++.+.+...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07871 152 AKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGI 231 (288)
T ss_pred eccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcc
Confidence 54322 233567899999999876 46899999999999999999999999999999999999999999998887653
Q ss_pred ccccccc---cC----------CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 648 QEIYKYF---TK----------EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 648 ~~~~~~~---~~----------~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.....+. .. ...+.....+...+++...|.+|.|+++++ +|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 232 TSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 3221111 10 112334445666677777788899999999 875
No 22
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-37 Score=324.57 Aligned_cols=269 Identities=30% Similarity=0.435 Sum_probs=221.1
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh---hhHhHHHHHHHHHHhcccCCCCCCc-eeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHH-ILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~---~~~~~~~Ei~iL~~L~~~~~~~hpn-Iv~l~~~f~~~~ 489 (697)
..|..+++||.|+||+||+|+++.+|+.||+|.++.... ......+|+.+|+.|++ +| |+++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~------~~~iv~L~dv~~~~~ 84 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSH------ANHIVRLHDVIHTSN 84 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCC------CcceEEEEeeeeecc
Confidence 457778889999999999999999999999999986533 45667899999999985 45 999999999877
Q ss_pred ------eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 490 ------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 490 ------~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
.+++|+||+..+|..++....... ..++...++.+++||+.||+|||+++|+||||||.||||++ .|.+|
T Consensus 85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~--~G~lK 160 (323)
T KOG0594|consen 85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS--SGVLK 160 (323)
T ss_pred cccccceEEEEEEeecccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC--CCcEe
Confidence 799999999999999988765431 22667889999999999999999999999999999999996 89999
Q ss_pred EeeCCCcccccc---ccccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 564 IIDLGSSCFQTD---NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 564 L~DFGla~~~~~---~~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|+|||+|+...- ..+..++|.+|+|||++.+. .|+..+||||+|||++||+++++.|++.++.+++.+|.+.+|.|
T Consensus 161 laDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP 240 (323)
T KOG0594|consen 161 LADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTP 240 (323)
T ss_pred eeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCC
Confidence 999999976542 24556789999999999988 69999999999999999999999999999999999999999999
Q ss_pred CHHHHhhccccccc---ccCCc---hhhh-------hHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 640 DLEMLMQGQEIYKY---FTKEY---DLYY-------INEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 640 p~e~~~~~~~~~~~---~~~~~---~l~~-------i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
..+.|+......+| |.... .+.. -..+...+++.-.+..|.+++.++ +++...
T Consensus 241 ~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 241 NEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 99888865433332 11111 1111 223444555556677899999888 666543
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-37 Score=334.87 Aligned_cols=253 Identities=30% Similarity=0.441 Sum_probs=209.6
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----h--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----K--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~ 484 (697)
...++|.+.+.||.|+||+|++|.+..+++.||+|++... . .....+.+|+.+++.+.+ ||||++++.+
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~-----HpnI~~l~ev 88 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRS-----HPNIIRLLEV 88 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhcc-----CCCEeEEEEE
Confidence 4567999999999999999999999999999999987653 1 234466689999998863 7899999999
Q ss_pred EEecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 485 f~~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
+.....+|+||||+.+ .|++.+..... +.+..++.+++||+.|++|||++||+||||||+|||++... +.+|
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~~g~------l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~-~~~K 161 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVNKGR------LKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE-GNLK 161 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHHcCC------CChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC-CCEE
Confidence 9999999999999985 78888875222 88899999999999999999999999999999999999622 8999
Q ss_pred EeeCCCcccc---ccccccccccCCCCCchhhcCCC-CC-chhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCC
Q 005415 564 IIDLGSSCFQ---TDNLCLYVQSRSYRAPEVIIGLP-YD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 564 L~DFGla~~~---~~~~~~~~gt~~Y~APE~l~~~~-~s-~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
|+|||++... .....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||...+....+..|...--.
T Consensus 162 l~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~ 241 (370)
T KOG0583|consen 162 LSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFK 241 (370)
T ss_pred EeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCcc
Confidence 9999999876 34567789999999999999987 76 7899999999999999999999998888877776543333
Q ss_pred CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 639 IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 639 ~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
+|. ++. ..-.......++..-|..|.++++++ +|+..
T Consensus 242 ~p~-----------~~~-----S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 242 IPS-----------YLL-----SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCC-----------CcC-----CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 332 111 22334445556666678899999999 99986
No 24
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-39 Score=323.40 Aligned_cols=214 Identities=29% Similarity=0.382 Sum_probs=186.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEE-EEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD-YFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~---~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~-~f~~~~ 489 (697)
..|+|+++||+|+||+||+++++.+|..||.|.++- +....+....|+.+|++|+ |||||++++ .|...+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~------HpNIVqYy~~~f~~~~ 92 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLN------HPNIVQYYAHSFIEDN 92 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcC------CchHHHHHHHhhhccc
Confidence 569999999999999999999999999999999874 4455677889999999986 789999999 555555
Q ss_pred e-EEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh--cC--ccccCCCCccccccccCcceEE
Q 005415 490 H-LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS--LG--IIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 490 ~-l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs--~g--IvHrDLKP~NILl~~~~~~~vK 563 (697)
. ++|||||++ |+|...++..+.. ...+++..++.++.|++.||.++|+ .+ |+||||||.||+++. +|.+|
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~q--kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~--~gvvK 168 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQ--KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTA--NGVVK 168 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhc--cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcC--CCcee
Confidence 5 899999998 5676766655433 3449999999999999999999999 45 999999999999995 89999
Q ss_pred EeeCCCcccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 564 IIDLGSSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 564 L~DFGla~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
|+|||+++...... ...+|||+||+||.+...+|+.++|||||||++|||+.-++||.+.+-.++..+|.+.--
T Consensus 169 LGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 169 LGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY 245 (375)
T ss_pred eccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC
Confidence 99999998876553 458999999999999999999999999999999999999999999988888888876533
No 25
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=3.4e-38 Score=338.42 Aligned_cols=289 Identities=34% Similarity=0.570 Sum_probs=254.9
Q ss_pred CCCCCcceeeCceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCce
Q 005415 399 EENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHI 478 (697)
Q Consensus 399 ~~~~~~pv~~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnI 478 (697)
...++|.+.+|+++..+|.+....|+|-||+|..|.|...|..||||||++.......-+.|+.||++|+...+.+-.|+
T Consensus 417 DaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hc 496 (752)
T KOG0670|consen 417 DAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHC 496 (752)
T ss_pred cccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHH
Confidence 34578899999999999999999999999999999999999999999999988888889999999999999988888899
Q ss_pred eEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC
Q 005415 479 LRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (697)
Q Consensus 479 v~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~ 558 (697)
++|+..|.+.+|+|||+|.+.-+|.++++.....-+ +.+..++.++.||+.||..|-.+||+|+||||+|||++. .
T Consensus 497 lrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvG---L~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE-~ 572 (752)
T KOG0670|consen 497 LRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVG---LHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE-S 572 (752)
T ss_pred HHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccc---eeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc-C
Confidence 999999999999999999999999999986554333 888899999999999999999999999999999999996 5
Q ss_pred cceEEEeeCCCccccccc-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 559 RCEIKIIDLGSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 559 ~~~vKL~DFGla~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
...+||||||.|.....+ .+.+.-+..|+|||+++|.+|+...|+||+||+||||.||+..|+|....++|..++++.|
T Consensus 573 k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG 652 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG 652 (752)
T ss_pred cceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence 778999999999776654 5556778899999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHhhcccccccccC-------------------------------------------CchhhhhHHHHHHHHHHH
Q 005415 638 PIDLEMLMQGQEIYKYFTK-------------------------------------------EYDLYYINEVCFANIFIS 674 (697)
Q Consensus 638 ~~p~e~~~~~~~~~~~~~~-------------------------------------------~~~l~~i~~~cw~~l~~~ 674 (697)
++|..|+..++=..+.|+. +....+-..+...++|+.
T Consensus 653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L 732 (752)
T KOG0670|consen 653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL 732 (752)
T ss_pred CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence 9999999866544444433 223334446667777888
Q ss_pred hhhhccCHHHHH--Hhhcc
Q 005415 675 LVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 675 ~~~~r~t~e~~~--~wl~~ 691 (697)
-|..|.|..+|+ |++.+
T Consensus 733 dP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 733 DPEKRITVNQALKHPFITE 751 (752)
T ss_pred ChhhcCCHHHHhcCCcccC
Confidence 899999999999 66643
No 26
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=338.66 Aligned_cols=244 Identities=25% Similarity=0.357 Sum_probs=208.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
..+++++.||+|.||.||+|.+. ....||+|.++......+.+.+|+++++.|+ |++||++++++..+..++|
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~------H~~lV~l~gV~~~~~piyI 278 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLR------HEKLVKLYGVCTKQEPIYI 278 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCc------ccCeEEEEEEEecCCceEE
Confidence 34666788999999999999974 3448999999987666688899999999997 7799999999999889999
Q ss_pred EEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
|||||. |+|+++++.... ..+...+...++.||++||+||+++++|||||..+||||+. +..+||+|||+|+.
T Consensus 279 VtE~m~~GsLl~yLr~~~~----~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~--~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTREG----GLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDE--DLVVKISDFGLARL 352 (468)
T ss_pred EEEecccCcHHHHhhhcCC----CccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeecc--CceEEEcccccccc
Confidence 999998 789999986222 23889999999999999999999999999999999999995 88999999999996
Q ss_pred ccccccc-ccc---cCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 573 QTDNLCL-YVQ---SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 573 ~~~~~~~-~~g---t~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
..+.... ..+ +..|.|||.+....++.|+|||||||+||||+| |+.||++.+..+.+..| .++
T Consensus 353 ~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~l------------e~G 420 (468)
T KOG0197|consen 353 IGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELL------------ERG 420 (468)
T ss_pred cCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHH------------hcc
Confidence 6554332 222 566999999999999999999999999999999 99999999999988887 456
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
.++++.-.++..++.+|..||+.. |..|.|-+.+.
T Consensus 421 yRlp~P~~CP~~vY~lM~~CW~~~----P~~RPtF~~L~ 455 (468)
T KOG0197|consen 421 YRLPRPEGCPDEVYELMKSCWHED----PEDRPTFETLR 455 (468)
T ss_pred CcCCCCCCCCHHHHHHHHHHhhCC----cccCCCHHHHH
Confidence 667777778899999999999987 55555555444
No 27
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-37 Score=342.43 Aligned_cols=212 Identities=27% Similarity=0.453 Sum_probs=189.0
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
+-..+|.++++||+|.||+|+++..+.+++.+|||+++++ ....+..+.|.+|+..++ +||.+++++.+|+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-----~HPFL~~L~~~fQ 439 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-----RHPFLVNLFSCFQ 439 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-----cCCeEeecccccc
Confidence 3346899999999999999999999999999999999975 345677888999998886 5999999999999
Q ss_pred ecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 487 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 487 ~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
..+++|+||||+.|+..-.+... ..+++..++.++..|+.||.|||++|||+||||.+|||++. .|.+||+|
T Consensus 440 T~~~l~fvmey~~Ggdm~~~~~~------~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~--eGh~kiAD 511 (694)
T KOG0694|consen 440 TKEHLFFVMEYVAGGDLMHHIHT------DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDT--EGHVKIAD 511 (694)
T ss_pred cCCeEEEEEEecCCCcEEEEEec------ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcc--cCcEEecc
Confidence 99999999999998762222111 12999999999999999999999999999999999999996 99999999
Q ss_pred CCCccc---cccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Q 005415 567 LGSSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 567 FGla~~---~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~ 635 (697)
||+++. .+....+++|||.|+|||++.+..|+..+|.|||||+|||||.|+.||++++.+++...|+..
T Consensus 512 FGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d 583 (694)
T KOG0694|consen 512 FGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND 583 (694)
T ss_pred cccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC
Confidence 999975 345677899999999999999999999999999999999999999999999999999998653
No 28
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3e-36 Score=322.98 Aligned_cols=265 Identities=32% Similarity=0.483 Sum_probs=208.8
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (697)
+|++.++||+|+||.||+|.+..+++.||||++... .....++.+|+.+++.++ ||||+++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR------HPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCC------CCCEeeecceEeccCCC
Confidence 699999999999999999999999999999998742 223346778888888775 88999999988643
Q ss_pred --CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 489 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 489 --~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
..+|+||||++++|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|
T Consensus 75 ~~~~~~lv~e~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kL~D 146 (338)
T cd07859 75 EFKDIYVVFELMESDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANA--DCKLKICD 146 (338)
T ss_pred CCceEEEEEecCCCCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEcc
Confidence 3589999999998888776432 2889999999999999999999999999999999999985 88999999
Q ss_pred CCCccccccc------cccccccCCCCCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCC
Q 005415 567 LGSSCFQTDN------LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 567 FGla~~~~~~------~~~~~gt~~Y~APE~l~~--~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
||++...... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+...++.
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~ 226 (338)
T cd07859 147 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGT 226 (338)
T ss_pred CccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC
Confidence 9998653221 123568999999999876 57899999999999999999999999999988888888899998
Q ss_pred CCHHHHhhcccc--ccccc------------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 639 IDLEMLMQGQEI--YKYFT------------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 639 ~p~e~~~~~~~~--~~~~~------------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
++.......... ..++. ........+.+...+.+...|..|.++++++ +|+.+..
T Consensus 227 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 227 PSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred CCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence 887765432110 00000 0001112223344444455688999999999 9997644
No 29
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.7e-36 Score=314.18 Aligned_cols=263 Identities=26% Similarity=0.426 Sum_probs=212.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~ 74 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLK------QENIVELKEAFRRRGK 74 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCC------CccccchhhhEecCCE
Confidence 47999999999999999999999999999999987532 23456678888888774 7899999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
.++||||+.++++..+..... .+++..++.++.||+.||.|||+.+|+||||||+||+++. ++.+||+|||++
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~~ 147 (287)
T cd07848 75 LYLVFEYVEKNMLELLEEMPN-----GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH--NDVLKLCDFGFA 147 (287)
T ss_pred EEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEeeccCc
Confidence 999999999887776643321 2888999999999999999999999999999999999985 788999999998
Q ss_pred cccccc----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 571 CFQTDN----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 571 ~~~~~~----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
...... .....+++.|+|||++.+..++.++|||||||++|+|++|++||++.+..+.+..+....++.|.+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07848 148 RNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKL 227 (287)
T ss_pred ccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHh
Confidence 765332 2235688999999999998899999999999999999999999999988888888888888888766542
Q ss_pred ccccccc----ccC-----------CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 647 GQEIYKY----FTK-----------EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 647 ~~~~~~~----~~~-----------~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
......+ +.. ...+.....+...+++...|..|.|+++++ +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 228 FYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 1111100 000 001223345566666677799999999998 774
No 30
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8e-36 Score=316.04 Aligned_cols=267 Identities=24% Similarity=0.369 Sum_probs=209.5
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.+.||.|+||.||+|.+..+++.||||+++... .......+|+.+++.++ ||||+++++++......
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 78 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK------HANIVLLHDIIHTKETL 78 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCC------CCCcCeEEEEEecCCeE
Confidence 68999999999999999999999999999999987532 22345677888888774 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.+++.+++..... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++.
T Consensus 79 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~ 151 (303)
T cd07869 79 TLVFEYVHTDLCQYMDKHPG-----GLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD--TGELKLADFGLAR 151 (303)
T ss_pred EEEEECCCcCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECCCCcce
Confidence 99999999998887764322 2788899999999999999999999999999999999985 7889999999986
Q ss_pred ccccc---cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHHhhCCCCHHHHhh
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~-~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
..... .....+++.|+|||++.+. .++.++|||||||++|+|++|..||.+. +..+.+..+...++.+....+..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 152 AKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPG 231 (303)
T ss_pred eccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccc
Confidence 54322 2335678999999998764 5888999999999999999999999875 44577777877777776655443
Q ss_pred cccccccccC------Cch---------hhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 647 GQEIYKYFTK------EYD---------LYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 647 ~~~~~~~~~~------~~~---------l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
......+... ... ......+....++...|.+|+|+++++ +|+...+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 2211111000 000 112234455556666788999999999 9998654
No 31
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.8e-36 Score=324.33 Aligned_cols=274 Identities=30% Similarity=0.477 Sum_probs=216.7
Q ss_pred CCcceeeCc---eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCC
Q 005415 402 KDLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADE 475 (697)
Q Consensus 402 ~~~pv~~~~---~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~h 475 (697)
+.+++..++ .+.++|++.+.||+|+||.||++.+..+++.||||++... ........+|+.+++.++ |
T Consensus 6 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h 79 (359)
T cd07876 6 QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN------H 79 (359)
T ss_pred CcceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCC------C
Confidence 345555555 4568999999999999999999999999999999998643 233456667888887764 8
Q ss_pred CceeEEEEEEEecC------eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCC
Q 005415 476 HHILRLYDYFYHLE------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (697)
Q Consensus 476 pnIv~l~~~f~~~~------~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP 549 (697)
|||+++++++.... ..++||||+++++...+.. .++...+..++.||+.||.|||++||+||||||
T Consensus 80 ~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp 151 (359)
T cd07876 80 KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 151 (359)
T ss_pred CCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 89999999987543 5799999999988776531 177888999999999999999999999999999
Q ss_pred ccccccccCcceEEEeeCCCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH
Q 005415 550 ENILIKSYQRCEIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVM 627 (697)
Q Consensus 550 ~NILl~~~~~~~vKL~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e 627 (697)
+|||++. ++.+||+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+
T Consensus 152 ~NIl~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~ 229 (359)
T cd07876 152 SNIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID 229 (359)
T ss_pred HHEEECC--CCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 9999985 789999999998754332 234577899999999999999999999999999999999999999999888
Q ss_pred HHHHHHHhhCCCCHHHHhhcccc-cccccC------------------------CchhhhhHHHHHHHHHHHhhhhccCH
Q 005415 628 ILARIIGMLGPIDLEMLMQGQEI-YKYFTK------------------------EYDLYYINEVCFANIFISLVVIRLTL 682 (697)
Q Consensus 628 ~l~~I~~~lg~~p~e~~~~~~~~-~~~~~~------------------------~~~l~~i~~~cw~~l~~~~~~~r~t~ 682 (697)
.+..+.+.++.++.++....... ..++.. .........+...+++...|..|.|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~ 309 (359)
T cd07876 230 QWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISV 309 (359)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCH
Confidence 99999999998887665432111 000000 00011223455556666778899999
Q ss_pred HHHH--Hhhcc
Q 005415 683 EYAA--LWLFG 691 (697)
Q Consensus 683 e~~~--~wl~~ 691 (697)
++++ +|+..
T Consensus 310 ~e~l~hp~~~~ 320 (359)
T cd07876 310 DEALRHPYITV 320 (359)
T ss_pred HHHhcCchhhh
Confidence 9999 89864
No 32
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.4e-37 Score=332.67 Aligned_cols=214 Identities=28% Similarity=0.477 Sum_probs=191.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+.. .....+.+|++|++.++ ||||+.++++|+...+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lk------Hpniv~m~esfEt~~~ 75 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLK------HPNIVEMLESFETSAH 75 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcC------CcchhhHHHhhcccce
Confidence 57889999999999999999999999999999997533 34466889999999986 7899999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
+|+|+||+.|+|..++..... ++++.++.++.|++.||.|||+++|.|||+||.|||+.. .+.+|++|||+|
T Consensus 76 ~~vVte~a~g~L~~il~~d~~------lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~--~~~~KlcdFg~A 147 (808)
T KOG0597|consen 76 LWVVTEYAVGDLFTILEQDGK------LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEK--GGTLKLCDFGLA 147 (808)
T ss_pred EEEEehhhhhhHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecC--CCceeechhhhh
Confidence 999999999999999887655 899999999999999999999999999999999999994 899999999999
Q ss_pred cccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
+....+ .+...|||.|||||++.+.+|+..+|+||||||+|||++|++||-..+..+.+..|..---++|.
T Consensus 148 r~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~ 221 (808)
T KOG0597|consen 148 RAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS 221 (808)
T ss_pred hhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc
Confidence 877654 34468999999999999999999999999999999999999999988888887777654444444
No 33
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=8.2e-36 Score=312.83 Aligned_cols=267 Identities=27% Similarity=0.404 Sum_probs=210.9
Q ss_pred CceEEEEEeccCCCCceEEEEECC-CCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-- 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~-~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~-- 487 (697)
.+|++++.||+|+||.||+|++.. +++.||+|+++... .......+|+.+++.+.. ..||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~hpniv~~~~~~~~~~ 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET---FEHPNVVRLFDVCTVSR 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcc---cCCCCcceEEEEEeccc
Confidence 479999999999999999999854 47889999987432 223456678888877754 359999999999862
Q ss_pred ---cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEE
Q 005415 488 ---LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (697)
Q Consensus 488 ---~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL 564 (697)
...+++||||+.++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||
T Consensus 78 ~~~~~~~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~--~~~~kl 151 (290)
T cd07862 78 TDRETKLTLVFEHVDQDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKL 151 (290)
T ss_pred CCCCCcEEEEEccCCCCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC--CCCEEE
Confidence 356899999999998888764332 22788999999999999999999999999999999999985 788999
Q ss_pred eeCCCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 565 IDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 565 ~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..|+...+.+..+
T Consensus 152 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 152 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 231 (290)
T ss_pred ccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 999998754432 234567999999999998899999999999999999999999999999999999999988877665
Q ss_pred HHhhccccc-ccccC---------CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 643 MLMQGQEIY-KYFTK---------EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 643 ~~~~~~~~~-~~~~~---------~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.+....... ..+.. .+.+.....+.+.+.+...|..|.|+.+++ +|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 543321111 11110 012334445666667777799999999998 774
No 34
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.9e-36 Score=323.10 Aligned_cols=259 Identities=25% Similarity=0.313 Sum_probs=207.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++++.||+|+||.||+|.+..+++.||||+++... .....+..|+.++..++ ||||+++++++....
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~iv~~~~~~~~~~ 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK------SEWLVKLLYAFQDDE 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC------CCCCccEEEEEEcCC
Confidence 47999999999999999999999999999999997542 23345667777777664 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..|+||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kL~Dfg 146 (333)
T cd05600 75 YLYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA--SGHIKLTDFG 146 (333)
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEEEeCc
Confidence 9999999997 46767665332 2788999999999999999999999999999999999985 7899999999
Q ss_pred CccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 569 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 569 la~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
++...........|++.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+............
T Consensus 147 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~---- 222 (333)
T cd05600 147 LSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVY---- 222 (333)
T ss_pred CCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCC----
Confidence 9987665555678999999999999999999999999999999999999999998888777766542211110000
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCC
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQN 695 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n 695 (697)
..........+..++..||. .-+..|.++++++ +|+....++
T Consensus 223 -~~~~~~~s~~~~~li~~~l~----~~~~rr~s~~~ll~h~~~~~~~~~ 266 (333)
T cd05600 223 -DDPRFNLSDEAWDLITKLIN----DPSRRFGSLEDIKNHPFFKEVDWN 266 (333)
T ss_pred -CccccccCHHHHHHHHHHhh----ChhhhcCCHHHHHhCcccCCCCHH
Confidence 00001223456667777775 4577788999999 898866543
No 35
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4.2e-36 Score=316.87 Aligned_cols=251 Identities=23% Similarity=0.301 Sum_probs=203.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~~ 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS------HPFIIRLFWTEHDQR 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC------CCcHhhhHhhhccCC
Confidence 36999999999999999999999999999999997532 23345677888888774 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+++||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~--~~~~kl~Dfg 146 (291)
T cd05612 75 FLYMLMEYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK--EGHIKLTDFG 146 (291)
T ss_pred eEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEEecC
Confidence 9999999997 46777665432 2788999999999999999999999999999999999985 7889999999
Q ss_pred CccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 569 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 569 la~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
++...........|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+....-.+|..
T Consensus 147 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~------ 220 (291)
T cd05612 147 FAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRH------ 220 (291)
T ss_pred cchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCcc------
Confidence 99876655555678999999999999999999999999999999999999999988888777775532222210
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccCCC
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGIDQN 695 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~~n 695 (697)
....+..++..||. ..|..|. ++++++ +|+...+++
T Consensus 221 -------~~~~~~~li~~~l~----~dp~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 221 -------LDLYAKDLIKKLLV----VDRTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred -------CCHHHHHHHHHHcC----CCHHHccCCccCCHHHHhcCccccCCCHH
Confidence 12234444444444 4566677 588888 999866543
No 36
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=323.46 Aligned_cols=252 Identities=22% Similarity=0.304 Sum_probs=205.0
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
.++|++.+.||+|+||.||+|++..+++.||||++.... .....+.+|+.+++.++ ||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~ 90 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS------HPFIVNMMCSFQDE 90 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC------CCCCCcEEEEEEcC
Confidence 367999999999999999999999999999999997532 23456778888888774 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
+..++||||+.+ +|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+||
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~Df 162 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDN--KGHVKVTDF 162 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECC--CCCEEEeec
Confidence 999999999975 6666665332 2788899999999999999999999999999999999985 788999999
Q ss_pred CCccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 568 GSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 568 Gla~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
|++...........|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.+...+.|.
T Consensus 163 g~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~------ 236 (329)
T PTZ00263 163 GFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN------ 236 (329)
T ss_pred cCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC------
Confidence 99987766555678999999999999999999999999999999999999999988887777766543222111
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccC-----HHHHH--HhhcccCCC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLT-----LEYAA--LWLFGIDQN 695 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t-----~e~~~--~wl~~~~~n 695 (697)
. ....+..++..||... |..|++ +++++ +|+.+.+++
T Consensus 237 -----~--~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 237 -----W--FDGRARDLVKGLLQTD----HTKRLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred -----C--CCHHHHHHHHHHhhcC----HHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence 1 1234555666665544 666664 78888 998775543
No 37
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2e-35 Score=330.90 Aligned_cols=269 Identities=29% Similarity=0.415 Sum_probs=209.8
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (697)
...+|++.++||+|+||.||+|.+..+++.||||.+..... ...+|+.+++.++ ||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~------h~niv~l~~~~~~~~~~ 134 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNLN------HINIIFLKDYYYTECFK 134 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhcC------CCCCcceeeeEeecccc
Confidence 34689999999999999999999999999999999875433 2346888888874 88999999987542
Q ss_pred -----CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 489 -----~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
..+++||||+++++..++....... ..+++..++.++.||+.||.|||+++|+||||||+|||++. ..+.+|
T Consensus 135 ~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~--~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~-~~~~vk 211 (440)
T PTZ00036 135 KNEKNIFLNVVMEFIPQTVHKYMKHYARNN--HALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP-NTHTLK 211 (440)
T ss_pred cCCCceEEEEEEecCCccHHHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC-CCCcee
Confidence 2477999999999887775432222 23889999999999999999999999999999999999985 345799
Q ss_pred EeeCCCcccccc--ccccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 564 IIDLGSSCFQTD--NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 564 L~DFGla~~~~~--~~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
|+|||++..... ......+++.|+|||++.+. .++.++|||||||++|||++|.+||.+.+..+.+.++++.++.++
T Consensus 212 L~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 212 LCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPT 291 (440)
T ss_pred eeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 999999976432 23345789999999998765 689999999999999999999999999999999999999999888
Q ss_pred HHHHhhccccccc--cc--CCch--------hhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 641 LEMLMQGQEIYKY--FT--KEYD--------LYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 641 ~e~~~~~~~~~~~--~~--~~~~--------l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
.+.+........- |. .... ...-..+...+++...|..|+|+.+++ +|+...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 8766532111000 00 0001 111233444445556688999999999 998643
No 38
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.1e-35 Score=324.13 Aligned_cols=208 Identities=23% Similarity=0.387 Sum_probs=177.8
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++++.||+|+||+||+|.+..+++.||||+++... .....+..|+.++..++ ||||+++++.+....
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~------~~~iv~~~~~~~~~~ 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD------SLWVVKMFYSFQDKL 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC------CCCcceEEEEEecCC
Confidence 36999999999999999999999999999999997532 23345667888877764 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+|+||||+.+ +|.+++.... .+++..++.++.|++.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~--~~~vkL~DFG 146 (363)
T cd05628 75 NLYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS--KGHVKLSDFG 146 (363)
T ss_pred eEEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCCEEEeecc
Confidence 99999999975 6666665332 2889999999999999999999999999999999999985 7899999999
Q ss_pred Cccccccc--------------------------------------cccccccCCCCCchhhcCCCCCchhhHHHHHHHH
Q 005415 569 SSCFQTDN--------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCIL 610 (697)
Q Consensus 569 la~~~~~~--------------------------------------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL 610 (697)
++...... ....+||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 98643211 1134789999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCcHHHHHHHHHHh
Q 005415 611 AELWTGEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 611 ~ELltG~~PF~~~~~~e~l~~I~~~ 635 (697)
|||++|..||.+.+..+.+.+|...
T Consensus 227 ~ell~G~~Pf~~~~~~~~~~~i~~~ 251 (363)
T cd05628 227 YEMLIGYPPFCSETPQETYKKVMNW 251 (363)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 9999999999998888888877653
No 39
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-36 Score=331.12 Aligned_cols=249 Identities=28% Similarity=0.423 Sum_probs=214.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
+-|++.+.||.|+.|.|-+|++..||+.+|||++.+. ......+.+||-|++.+. |||++++|++++...
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~------HpnVl~LydVwe~~~ 85 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE------HPNVLRLYDVWENKQ 85 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc------CCCeeeeeeeeccCc
Confidence 6799999999999999999999999999999999754 234567889999999986 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
++|+|+||+. |.|.+++..... +++.++.++++||+.|+.|+|..+|+||||||+|+|++. .+.|||+|||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG~------l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~--~~nIKIADFG 157 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKGP------LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV--KNNIKIADFG 157 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc--ccCEeeeccc
Confidence 9999999997 567777765443 899999999999999999999999999999999999996 5569999999
Q ss_pred Ccccccc--ccccccccCCCCCchhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 569 SSCFQTD--NLCLYVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 569 la~~~~~--~~~~~~gt~~Y~APE~l~~~~~-s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
+|..... -..+.+|+|+|.|||++.|.+| +.++||||.|||||.||||++||.+++...++.++.+..-..|
T Consensus 158 MAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP----- 232 (786)
T KOG0588|consen 158 MASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP----- 232 (786)
T ss_pred eeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC-----
Confidence 9976543 3567899999999999999987 4689999999999999999999999999999988866444333
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
..+..-.++....++.--+..|.|++++. +||.++.
T Consensus 233 ------------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 233 ------------SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred ------------CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 23344455666677777788899999999 9998764
No 40
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=326.64 Aligned_cols=240 Identities=28% Similarity=0.331 Sum_probs=194.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcE-EEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVD-VCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~-VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
....+.+.||+|+||+||+|.+. |.. ||+|++.... .....+.+|+.+|..++ |||||+++|++....
T Consensus 41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~------HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLR------HPNIVQFYGACTSPP 112 (362)
T ss_pred HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCC------CCCeeeEEEEEcCCC
Confidence 34555666999999999999874 555 9999998532 22568899999999875 899999999999887
Q ss_pred -eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcC-ccccCCCCccccccccCcc-eEEEe
Q 005415 490 -HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG-IIHCDLKPENILIKSYQRC-EIKII 565 (697)
Q Consensus 490 -~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~g-IvHrDLKP~NILl~~~~~~-~vKL~ 565 (697)
.++|||||++ |+|..++... ....+++..+..|+.||+.||.|||+++ ||||||||+|||++. .. ++||+
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~----~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~--~~~~~KI~ 186 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKK----RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDL--KGKTLKIA 186 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhc----ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcC--CCCEEEEC
Confidence 7999999998 5566666542 1223999999999999999999999999 999999999999995 65 99999
Q ss_pred eCCCcccccc---ccccccccCCCCCchhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 566 DLGSSCFQTD---NLCLYVQSRSYRAPEVII--GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 566 DFGla~~~~~---~~~~~~gt~~Y~APE~l~--~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
|||+++.... ..+...||+.|||||++. ...|+.|+||||||+++|||+||+.||.+....+....++.....++
T Consensus 187 DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~ 266 (362)
T KOG0192|consen 187 DFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPP 266 (362)
T ss_pred CCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence 9999977653 334468999999999999 56899999999999999999999999999988666666654433333
Q ss_pred HHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhh
Q 005415 641 LEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVI 678 (697)
Q Consensus 641 ~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~ 678 (697)
.. ..++..+..+|+.||......+|..
T Consensus 267 ~p-----------~~~~~~l~~l~~~CW~~dp~~RP~f 293 (362)
T KOG0192|consen 267 IP-----------KECPPHLSSLMERCWLVDPSRRPSF 293 (362)
T ss_pred CC-----------ccCCHHHHHHHHHhCCCCCCcCCCH
Confidence 21 1266788999999999885554444
No 41
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.5e-35 Score=311.14 Aligned_cols=267 Identities=26% Similarity=0.367 Sum_probs=214.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.++||+|+||.||+|.+..+++.||+|.++... .......+|+.+++.++ ||||+++++++...+..
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 79 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLK------HANIVTLHDIVHTDKSL 79 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCC------CCCcceEEEEEeeCCeE
Confidence 57999999999999999999999999999999987432 22335667888888774 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.+++.+.+..... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~ 152 (309)
T cd07872 80 TLVFEYLDKDLKQYMDDCGN-----IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLAR 152 (309)
T ss_pred EEEEeCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECccccce
Confidence 99999999988877654322 2788899999999999999999999999999999999985 7889999999986
Q ss_pred ccccc---cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.++.+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07872 153 AKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGI 232 (309)
T ss_pred ecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhh
Confidence 54322 223467889999999875 45889999999999999999999999999999999999999998888776543
Q ss_pred cccccccc-------------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 648 QEIYKYFT-------------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 648 ~~~~~~~~-------------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.....+.. ....+..-..+...+++...|..|.|+++++ +|+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 233 SSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred cchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 22111110 0112233334555666666788999999999 9998643
No 42
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=320.52 Aligned_cols=255 Identities=23% Similarity=0.347 Sum_probs=204.5
Q ss_pred CceecCceEEEEEeccCCCCceEEEEECCCC-cEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005415 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (697)
Q Consensus 409 ~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g-~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~ 483 (697)
..+..++|++.+.||+|+||.||+|.+..++ ..||+|++.... .....+.+|+.+++.++ ||||+++++
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~Iv~~~~ 98 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN------HPFCVNLYG 98 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC------CCCCcceEE
Confidence 3444578999999999999999999876554 789999987532 23455677888888774 889999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 484 ~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
++......++||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+
T Consensus 99 ~~~~~~~~~lv~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~i 170 (340)
T PTZ00426 99 SFKDESYLYLVLEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK--DGFI 170 (340)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCE
Confidence 9999999999999996 56777665432 2889999999999999999999999999999999999984 8899
Q ss_pred EEeeCCCccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 563 KL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.......+......+|.
T Consensus 171 kL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~- 249 (340)
T PTZ00426 171 KMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK- 249 (340)
T ss_pred EEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCC-
Confidence 9999999987665555678999999999999988999999999999999999999999998887777777553322221
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhc-----cCHHHHH--HhhcccCC
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIR-----LTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r-----~t~e~~~--~wl~~~~~ 694 (697)
. ....+..++..|+... |..| .++++++ +|+...++
T Consensus 250 ----------~--~~~~~~~li~~~l~~d----p~~R~~~~~~~~~~~~~hp~f~~~~~ 292 (340)
T PTZ00426 250 ----------F--LDNNCKHLMKKLLSHD----LTKRYGNLKKGAQNVKEHPWFGNIDW 292 (340)
T ss_pred ----------C--CCHHHHHHHHHHcccC----HHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 1 1223445555555544 5555 4899988 99887654
No 43
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3e-35 Score=318.99 Aligned_cols=273 Identities=28% Similarity=0.457 Sum_probs=216.3
Q ss_pred CcceeeCc---eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCC
Q 005415 403 DLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH 476 (697)
Q Consensus 403 ~~pv~~~~---~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hp 476 (697)
.+++.+++ .+.++|++.+.||+|+||.||+|.+..+++.||||.+... ........+|+.+++.++ ||
T Consensus 3 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~ 76 (355)
T cd07874 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HK 76 (355)
T ss_pred ceeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC------CC
Confidence 34555554 3468999999999999999999999999999999998753 233456667888888774 78
Q ss_pred ceeEEEEEEEec------CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCc
Q 005415 477 HILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 550 (697)
Q Consensus 477 nIv~l~~~f~~~------~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~ 550 (697)
||+++++++... ...++||||+.+++...+.. .++...+..++.|++.||.|||++||+||||||+
T Consensus 77 niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~ 148 (355)
T cd07874 77 NIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 148 (355)
T ss_pred chhceeeeeeccccccccceeEEEhhhhcccHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChH
Confidence 999999998754 35799999999988776642 1778889999999999999999999999999999
Q ss_pred cccccccCcceEEEeeCCCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHH
Q 005415 551 NILIKSYQRCEIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (697)
Q Consensus 551 NILl~~~~~~~vKL~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~ 628 (697)
|||++. ++.+||+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 149 Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 226 (355)
T cd07874 149 NIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226 (355)
T ss_pred HEEECC--CCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999985 788999999999765443 2345789999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhhCCCCHHHHhhcccc-ccccc--------------------CC----chhhhhHHHHHHHHHHHhhhhccCHH
Q 005415 629 LARIIGMLGPIDLEMLMQGQEI-YKYFT--------------------KE----YDLYYINEVCFANIFISLVVIRLTLE 683 (697)
Q Consensus 629 l~~I~~~lg~~p~e~~~~~~~~-~~~~~--------------------~~----~~l~~i~~~cw~~l~~~~~~~r~t~e 683 (697)
+..+++.++.+..+++...... ..+.. .. ......+.+...+.+...|..|.|++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ 306 (355)
T cd07874 227 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306 (355)
T ss_pred HHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHH
Confidence 8988888888777665432211 01100 00 01112334555556666689999999
Q ss_pred HHH--Hhhcc
Q 005415 684 YAA--LWLFG 691 (697)
Q Consensus 684 ~~~--~wl~~ 691 (697)
+++ +|+..
T Consensus 307 ell~hp~~~~ 316 (355)
T cd07874 307 EALQHPYINV 316 (355)
T ss_pred HHhcCcchhc
Confidence 999 88864
No 44
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.9e-35 Score=321.46 Aligned_cols=253 Identities=22% Similarity=0.338 Sum_probs=197.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++++.||+|+||.||+|++..+++.||||++.... .....+.+|+.+++.++ ||||+++++++....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~~~~~~~~~~ 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD------NPWVVKLYYSFQDEN 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCCcceEEEEEcCC
Confidence 36999999999999999999999999999999997532 23345667888888774 889999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+++||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.++|+|||
T Consensus 75 ~~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg 146 (364)
T cd05599 75 YLYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA--KGHIKLSDFG 146 (364)
T ss_pred eEEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEeecc
Confidence 99999999975 5666665322 2899999999999999999999999999999999999985 8899999999
Q ss_pred Cccccccc-----------------------------------------cccccccCCCCCchhhcCCCCCchhhHHHHH
Q 005415 569 SSCFQTDN-----------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLG 607 (697)
Q Consensus 569 la~~~~~~-----------------------------------------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLG 607 (697)
++...... ....+||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 87543211 0123689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccC---HHH
Q 005415 608 CILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLT---LEY 684 (697)
Q Consensus 608 viL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t---~e~ 684 (697)
|++|+|++|..||.+.+..+.+..++......+. ............++ ..++ ..+..|.+ +++
T Consensus 227 ~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~---------~~~~~~s~~~~~li----~~ll-~~p~~R~~~~~~~~ 292 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQETYRKIINWKETLQF---------PDEVPLSPEAKDLI----KRLC-CEAERRLGNNGVNE 292 (364)
T ss_pred hHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCC---------CCCCCCCHHHHHHH----HHHc-cCHhhcCCCCCHHH
Confidence 9999999999999998887777776543221110 00001112233333 3333 25667776 888
Q ss_pred HH--HhhcccCC
Q 005415 685 AA--LWLFGIDQ 694 (697)
Q Consensus 685 ~~--~wl~~~~~ 694 (697)
++ +|+.+.++
T Consensus 293 ll~h~~~~~~~~ 304 (364)
T cd05599 293 IKSHPFFKGVDW 304 (364)
T ss_pred HhcCCCcCCCCH
Confidence 88 89877653
No 45
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.7e-36 Score=315.62 Aligned_cols=253 Identities=29% Similarity=0.430 Sum_probs=211.7
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
+..||++.+.||+|.||+|-+|.+...|+.||||.++++. ...-++.+||+|+..|+ ||||+.+|.+|+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN------HPhII~IyEVFEN 124 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN------HPHIIQIYEVFEN 124 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC------CCceeehhhhhcC
Confidence 4579999999999999999999999999999999998643 44456788999998886 8999999999999
Q ss_pred cCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
.+.+.|||||.. |.|++++...+. +++.+++.+++||.+|+.|+|+++++|||||.+|||++. ++.+||+|
T Consensus 125 kdKIvivMEYaS~GeLYDYiSer~~------LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~--N~NiKIAD 196 (668)
T KOG0611|consen 125 KDKIVIVMEYASGGELYDYISERGS------LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ--NNNIKIAD 196 (668)
T ss_pred CceEEEEEEecCCccHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecC--CCCeeeec
Confidence 999999999997 679999876654 899999999999999999999999999999999999995 89999999
Q ss_pred CCCcccccc--ccccccccCCCCCchhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 567 LGSSCFQTD--NLCLYVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 567 FGla~~~~~--~~~~~~gt~~Y~APE~l~~~~~-s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
||++....+ -..+++|+|-|.+||++.|.+| ++.+|.|||||+||.|+.|..||.+.+-..++.+|...
T Consensus 197 FGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G-------- 268 (668)
T KOG0611|consen 197 FGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG-------- 268 (668)
T ss_pred cchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc--------
Confidence 999977554 3567999999999999999987 46799999999999999999999999888877777432
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH-HhhcccCCCC
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA-LWLFGIDQNK 696 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~-~wl~~~~~n~ 696 (697)
.|+.....-..-+. ...++---|..|.|+|.+. -||..|.-|+
T Consensus 269 --------aYrEP~~PSdA~gL--IRwmLmVNP~RRATieDiAsHWWvNwgy~~ 312 (668)
T KOG0611|consen 269 --------AYREPETPSDASGL--IRWMLMVNPERRATIEDIASHWWVNWGYNM 312 (668)
T ss_pred --------cccCCCCCchHHHH--HHHHHhcCcccchhHHHHhhhheeeccccc
Confidence 12222111111122 2223444577799999999 9999887764
No 46
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.7e-35 Score=323.89 Aligned_cols=253 Identities=25% Similarity=0.337 Sum_probs=194.6
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++++.||+|+||.||++.+..+++.||||++.... .....+.+|+++++.+ +||||++++++|....
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l------~hp~iv~~~~~~~~~~ 74 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES------DSPWVVSLYYSFQDAQ 74 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC------CCCCcceEEEEEEcCC
Confidence 46999999999999999999999999999999987532 2334566788887765 4889999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+|+||||+. ++|.+++.... .+++..++.++.|++.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~--~~~~kl~DfG 146 (377)
T cd05629 75 YLYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR--GGHIKLSDFG 146 (377)
T ss_pred eeEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEEeecc
Confidence 9999999996 56766665332 2788999999999999999999999999999999999985 7889999999
Q ss_pred Cccccccc--------------------------------------------------cccccccCCCCCchhhcCCCCC
Q 005415 569 SSCFQTDN--------------------------------------------------LCLYVQSRSYRAPEVIIGLPYD 598 (697)
Q Consensus 569 la~~~~~~--------------------------------------------------~~~~~gt~~Y~APE~l~~~~~s 598 (697)
++...... ....+||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 88532110 0024689999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhh
Q 005415 599 QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVI 678 (697)
Q Consensus 599 ~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~ 678 (697)
.++|||||||++|||++|.+||.+.+..+.+..+......+.. .....+.....+...+++. .+..
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-------------p~~~~~s~~~~dli~~lL~-~~~~ 292 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYF-------------PDDIHLSVEAEDLIRRLIT-NAEN 292 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCC-------------CCCCCCCHHHHHHHHHHhc-CHhh
Confidence 9999999999999999999999988887777776542211110 0001112222333333332 3444
Q ss_pred ---ccCHHHHH--HhhcccCC
Q 005415 679 ---RLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 679 ---r~t~e~~~--~wl~~~~~ 694 (697)
|.++++++ +|+.+.++
T Consensus 293 r~~r~~~~~~l~hp~~~~~~~ 313 (377)
T cd05629 293 RLGRGGAHEIKSHPFFRGVDW 313 (377)
T ss_pred cCCCCCHHHHhcCCCcCCCCH
Confidence 45999988 99987653
No 47
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8e-35 Score=304.69 Aligned_cols=266 Identities=26% Similarity=0.384 Sum_probs=211.3
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe----
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH---- 487 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~---- 487 (697)
+|++++.||+|+||+||+|.++.+++.||+|.++... .......+|+.+++.+.. .+||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~ni~~~~~~~~~~~~~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA---FDHPNIVRLMDVCATSRTD 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh---cCCCCeeeeeeeeccccCC
Confidence 5899999999999999999999999999999987432 222355678888887754 359999999999864
Q ss_pred -cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 -LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 -~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
....++||||+.+++..++..... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|
T Consensus 78 ~~~~~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~kl~d 151 (288)
T cd07863 78 RETKVTLVFEHVDQDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGQVKLAD 151 (288)
T ss_pred CCceEEEEEcccccCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECc
Confidence 245899999999988887764322 22889999999999999999999999999999999999985 78899999
Q ss_pred CCCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 567 LGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 567 FGla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
||++...... .....++..|+|||++.+..++.++|||||||++|+|++|.+||.+....+.+.++....+.+....+
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 152 FGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred cCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 9998765432 23356788999999999989999999999999999999999999999999999999988887666554
Q ss_pred hhccccc-cccc---------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 645 MQGQEIY-KYFT---------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 645 ~~~~~~~-~~~~---------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
....... ..+. ..+.+.....+...+++...|..|+|+++++ +|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 3221111 0110 0112333445666677777789999999998 774
No 48
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-35 Score=322.89 Aligned_cols=261 Identities=23% Similarity=0.320 Sum_probs=206.3
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.++|++++.||+|+||.||+|.+..+++.||||.... ....+|+.+++.++ ||||++++++|......+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~------HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAIN------HPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCC------CCCCCCEeEEEEECCeeE
Confidence 4679999999999999999999999999999997542 34678999998885 889999999999999999
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
+|||++.++|..++..... +++..++.++.||+.||.|||++||+||||||+|||++. .+.+||+|||++..
T Consensus 160 lv~e~~~~~L~~~l~~~~~------l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~--~~~vkL~DFG~a~~ 231 (391)
T PHA03212 160 LILPRYKTDLYCYLAAKRN------IAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINH--PGDVCLGDFGAACF 231 (391)
T ss_pred EEEecCCCCHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcC--CCCEEEEeCCcccc
Confidence 9999999988887754322 788999999999999999999999999999999999985 78899999999865
Q ss_pred ccc----ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------cHHHHHHHHHHhhCCCCH
Q 005415 573 QTD----NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND-------AVVMILARIIGMLGPIDL 641 (697)
Q Consensus 573 ~~~----~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~-------~~~e~l~~I~~~lg~~p~ 641 (697)
... ......||+.|+|||++.+..++.++|||||||++|||++|..||... ....++..|+..+|.+|.
T Consensus 232 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~ 311 (391)
T PHA03212 232 PVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPN 311 (391)
T ss_pred cccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChh
Confidence 322 223357899999999999999999999999999999999999887543 245677888888887765
Q ss_pred HHHhhcc-ccc------------c-----cccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 642 EMLMQGQ-EIY------------K-----YFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 642 e~~~~~~-~~~------------~-----~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
++..... ... . .|.....+..-+.+...+++...|..|.|+++++ +|+...
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 312 EFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 4321110 000 0 0000011112234445556666688899999999 999764
No 49
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.5e-35 Score=317.17 Aligned_cols=263 Identities=30% Similarity=0.491 Sum_probs=211.6
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+.++|++.+.||+|+||.||+|.+..+++.||||++... ........+|+.+++.++ ||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~ii~~~~~~~~~ 95 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HKNIIGLLNVFTPQ 95 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC------CCCccccceeeccc
Confidence 458999999999999999999999999999999998753 233455677888887764 78999999988643
Q ss_pred ------CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 489 ------~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
...|+||||+++++...+.. .++...+..++.|++.||.|||++||+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~ 165 (364)
T cd07875 96 KSLEEFQDVYIVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165 (364)
T ss_pred ccccccCeEEEEEeCCCCCHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECC--CCcE
Confidence 35799999999988876642 1778889999999999999999999999999999999985 7889
Q ss_pred EEeeCCCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 563 KIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 563 KL~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
||+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+.++++.++.+.
T Consensus 166 kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred EEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99999999765443 2345789999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHhhccccc-ccccC--------------------Cc----hhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 641 LEMLMQGQEIY-KYFTK--------------------EY----DLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 641 ~e~~~~~~~~~-~~~~~--------------------~~----~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
++++....... .+... .. ......++...+++...|..|.|+++++ +|+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 77655422110 00000 00 0012234555666666688899999999 8986
No 50
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-35 Score=319.60 Aligned_cols=259 Identities=30% Similarity=0.424 Sum_probs=220.5
Q ss_pred CceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005415 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (697)
Q Consensus 409 ~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~ 484 (697)
..-+...|++.+.||+|.||.||+++.+.+|+.+|+|++.+... ......+|+.||+.+.. |||||.+++.
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~-----hpniv~l~~~ 104 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSG-----HPNIVQLKDA 104 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccC-----CCCEEEEEEE
Confidence 34556789999999999999999999999999999999976432 34678899999999974 8999999999
Q ss_pred EEecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc--ce
Q 005415 485 FYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR--CE 561 (697)
Q Consensus 485 f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~--~~ 561 (697)
|++...+++|||++. |.|.+.+... .+++..+..+++|++.|+.|||+.||+||||||+|+|+..... +.
T Consensus 105 ~e~~~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 105 FEDPDSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred EEcCCeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCc
Confidence 999999999999998 4566666544 2899999999999999999999999999999999999986443 58
Q ss_pred EEEeeCCCcccccc--ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 562 IKIIDLGSSCFQTD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 562 vKL~DFGla~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
+|++|||++..... .....+||+.|+|||++....|+..+||||+|+++|.|++|.+||.+.+......+|...--.+
T Consensus 178 ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f 257 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDF 257 (382)
T ss_pred EEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCC
Confidence 99999999988766 4566899999999999999999999999999999999999999999999888888776543333
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
+.+. | ........+-...++..-+..|+|+++++ ||+.+.
T Consensus 258 ~~~~----------w---~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 258 TSEP----------W---DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred CCCC----------c---cccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 3222 2 24455666666777777788899999999 999976
No 51
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6.2e-35 Score=306.83 Aligned_cols=256 Identities=23% Similarity=0.242 Sum_probs=196.6
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++ |+||+++++++...+..
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~iv~~~~~~~~~~~~ 75 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN------SRFVVSLAYAYETKDAL 75 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC------CCcEEEEEEEEccCCeE
Confidence 788999999999999999999999999999987532 22234567888888774 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+.+ +|...+..... ..+++..+..++.|++.||.|||+++|+||||||+|||++. ++.++|+|||++
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~--~~~~kl~Dfg~~ 149 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD--RGHIRISDLGLA 149 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeCCCc
Confidence 999999985 45444432211 23889999999999999999999999999999999999985 788999999998
Q ss_pred cccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 571 CFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 571 ~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
...... .....|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.........+..........
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------ 223 (285)
T cd05631 150 VQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEE------ 223 (285)
T ss_pred EEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccccc------
Confidence 764332 234578999999999999999999999999999999999999998765433333332222111110
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccC-----HHHHH--HhhcccCCCC
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLT-----LEYAA--LWLFGIDQNK 696 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t-----~e~~~--~wl~~~~~n~ 696 (697)
... .-...+..++..||... |.+|++ +++++ +|+.+.++++
T Consensus 224 -~~~--~~s~~~~~li~~~l~~~----P~~R~~~~~~~~~~~~~h~~~~~~~~~~ 271 (285)
T cd05631 224 -YSE--KFSEDAKSICRMLLTKN----PKERLGCRGNGAAGVKQHPIFKNINFKR 271 (285)
T ss_pred -CCc--cCCHHHHHHHHHHhhcC----HHHhcCCCCCCHHHHhcCHhhcCCCHHH
Confidence 000 11235556666666655 566654 78888 9999887654
No 52
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=315.76 Aligned_cols=251 Identities=24% Similarity=0.330 Sum_probs=209.3
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh---------------hhHhHHHHHHHHHHhcccCCCCCC
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---------------FFDQSLDEIKLLKLVNKNDPADEH 476 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~---------------~~~~~~~Ei~iL~~L~~~~~~~hp 476 (697)
..++|++++.||+|.||.|-+|++..+++.||||++.+.+. ..+...+||.||+++. ||
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~------H~ 168 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH------HP 168 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC------Cc
Confidence 34789999999999999999999999999999999975321 2357788999999986 78
Q ss_pred ceeEEEEEEEec--CeEEEEEEccccchHHHHHhhhccCCCcc-cCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccc
Q 005415 477 HILRLYDYFYHL--EHLFIVCELLRANLYEFQKFNQESGGEAY-FTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENIL 553 (697)
Q Consensus 477 nIv~l~~~f~~~--~~l~LVmEyl~gsL~~~l~~~~~~~~~~~-ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NIL 553 (697)
|||+|+.+..+. +.+|||+|||..+-... ...+.+ +++.+++.++++++.||.|||.+|||||||||+|+|
T Consensus 169 nVV~LiEvLDDP~s~~~YlVley~s~G~v~w------~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLL 242 (576)
T KOG0585|consen 169 NVVKLIEVLDDPESDKLYLVLEYCSKGEVKW------CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLL 242 (576)
T ss_pred CeeEEEEeecCcccCceEEEEEeccCCcccc------CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheE
Confidence 999999999865 67999999998543221 222333 889999999999999999999999999999999999
Q ss_pred ccccCcceEEEeeCCCccccc--------cccccccccCCCCCchhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCC
Q 005415 554 IKSYQRCEIKIIDLGSSCFQT--------DNLCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFP 621 (697)
Q Consensus 554 l~~~~~~~vKL~DFGla~~~~--------~~~~~~~gt~~Y~APE~l~~~~----~s~ksDIWSLGviL~ELltG~~PF~ 621 (697)
++. +|++||+|||.+.... ......+|||.|+|||...+.. .+.+.|||||||+||.|+.|+.||-
T Consensus 243 l~~--~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~ 320 (576)
T KOG0585|consen 243 LSS--DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF 320 (576)
T ss_pred EcC--CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence 996 7999999999987541 1233468999999999997732 4568999999999999999999999
Q ss_pred CCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 622 NDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 622 ~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
++...+...+|+..--.+| ..+++.+..++....++.+-|..|.++.++. +|...
T Consensus 321 ~~~~~~l~~KIvn~pL~fP---------------~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 321 DDFELELFDKIVNDPLEFP---------------ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR 377 (576)
T ss_pred cchHHHHHHHHhcCcccCC---------------CcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence 9999999999976332222 2346778888899999999999999999888 99874
No 53
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5e-35 Score=320.81 Aligned_cols=206 Identities=25% Similarity=0.381 Sum_probs=175.0
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+|+++++||+|+||.||+|++..+++.||||++.... .....+.+|+.+++.++ ||||+++++.+.....
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~------h~~iv~~~~~~~~~~~ 75 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD------NEWVVRLYYSFQDKDN 75 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC------CCcCCeEEEEEEeCCE
Confidence 6899999999999999999999999999999997532 23456677888888764 7899999999999999
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
+++||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~--~g~~kL~DFGl 147 (382)
T cd05625 76 LYFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGL 147 (382)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEEeECCC
Confidence 9999999975 5666664322 2788899999999999999999999999999999999985 88999999998
Q ss_pred cccccc--------------------------------------------------ccccccccCCCCCchhhcCCCCCc
Q 005415 570 SCFQTD--------------------------------------------------NLCLYVQSRSYRAPEVIIGLPYDQ 599 (697)
Q Consensus 570 a~~~~~--------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ 599 (697)
+..... .....+||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 642110 011246899999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Q 005415 600 KIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 634 (697)
Q Consensus 600 ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~ 634 (697)
++|||||||++|||++|++||.+.+..+...++..
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~ 262 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVIN 262 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence 99999999999999999999999888777766654
No 54
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.6e-35 Score=319.60 Aligned_cols=254 Identities=27% Similarity=0.373 Sum_probs=205.6
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++++.||+|+||+||+|.+..+++.||||+++... .....+..|+.++..++ ||||+++++++...+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~ 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD------SPWIVKLYYSFQDEE 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC------CCCccchhhheecCC
Confidence 47999999999999999999999999999999997532 33345677888887775 889999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+++||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~--~~~~kL~Dfg 146 (350)
T cd05573 75 HLYLVMEYMPGGDLMNLLIRKD------VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDA--DGHIKLADFG 146 (350)
T ss_pred eEEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEeecCC
Confidence 9999999996 56777665431 2889999999999999999999999999999999999985 7899999999
Q ss_pred Ccccccccc--------------------------------ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhC
Q 005415 569 SSCFQTDNL--------------------------------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616 (697)
Q Consensus 569 la~~~~~~~--------------------------------~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG 616 (697)
++....... ....|++.|+|||++.+..++.++|||||||++|+|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 987544322 235689999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccC-HHHHH--HhhcccC
Q 005415 617 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLT-LEYAA--LWLFGID 693 (697)
Q Consensus 617 ~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t-~e~~~--~wl~~~~ 693 (697)
+.||.+.+..+...++......... .........+..++..|+. .+..|.+ +++++ +|+...+
T Consensus 227 ~~Pf~~~~~~~~~~~i~~~~~~~~~---------p~~~~~~~~~~~li~~ll~-----dp~~R~~s~~~ll~hp~~~~~~ 292 (350)
T cd05573 227 FPPFYSDTLQETYNKIINWKESLRF---------PPDPPVSPEAIDLICRLLC-----DPEDRLGSFEEIKSHPFFKGID 292 (350)
T ss_pred CCCCCCCCHHHHHHHHhccCCcccC---------CCCCCCCHHHHHHHHHHcc-----ChhhcCCCHHHHhcCCCcCCCC
Confidence 9999998887777777652221111 0111123455566666653 5888999 99999 9998776
Q ss_pred CC
Q 005415 694 QN 695 (697)
Q Consensus 694 ~n 695 (697)
++
T Consensus 293 ~~ 294 (350)
T cd05573 293 WE 294 (350)
T ss_pred HH
Confidence 54
No 55
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7.1e-35 Score=318.48 Aligned_cols=263 Identities=27% Similarity=0.431 Sum_probs=210.0
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC--
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-- 489 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~-- 489 (697)
.|++.+.||+|+||.||++.+..+++.||||.+... .....++.+|+.+++.++ |+||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK------HDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCC------CCCcCCHhheecCCCcc
Confidence 378899999999999999999999999999998642 223456778888888775 789999999998776
Q ss_pred ---eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 490 ---HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 490 ---~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
..++||||+.++|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~--~~~~kL~D 146 (372)
T cd07853 75 PFEEIYVVTELMQSDLHKIIVSPQ------PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS--NCVLKICD 146 (372)
T ss_pred ccceEEEEeeccccCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC--CCCEEecc
Confidence 799999999988887765332 2889999999999999999999999999999999999985 78999999
Q ss_pred CCCccccccc----cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 567 LGSSCFQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 567 FGla~~~~~~----~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
||++...... .....+++.|+|||++.+. .++.++|||||||++|||++|++||.+.+..+.+..|.+.+|.++.
T Consensus 147 fg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~ 226 (372)
T cd07853 147 FGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL 226 (372)
T ss_pred ccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 9998754322 2234678899999999875 4789999999999999999999999999999999999999998888
Q ss_pred HHHhhccc-ccc--------------cccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 642 EMLMQGQE-IYK--------------YFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 642 e~~~~~~~-~~~--------------~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
+.+..... ... .+...........+...+++...|..|.|+++++ +|+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 227 EAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 76543211 000 0011111122333444555556688999999999 99876
No 56
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=4.3e-35 Score=320.45 Aligned_cols=253 Identities=22% Similarity=0.309 Sum_probs=196.1
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++++.||+|+||.||+|++..+++.||||++.... .....+.+|+.+++.++ ||||+++++.+...+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~~~~~~~~~~ 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD------NEWVVKLYYSFQDKD 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC------CCCcceEEEEEEcCC
Confidence 36999999999999999999999999999999997532 23345677888888774 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+++||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~--~~~ikL~DFG 146 (376)
T cd05598 75 NLYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFG 146 (376)
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC--CCCEEEEeCC
Confidence 9999999997 56777765332 2788899999999999999999999999999999999985 7889999999
Q ss_pred Ccccccc----------------------------------------------ccccccccCCCCCchhhcCCCCCchhh
Q 005415 569 SSCFQTD----------------------------------------------NLCLYVQSRSYRAPEVIIGLPYDQKID 602 (697)
Q Consensus 569 la~~~~~----------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksD 602 (697)
++..... .....+||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 8742110 001246899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhcc--
Q 005415 603 LWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRL-- 680 (697)
Q Consensus 603 IWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-- 680 (697)
||||||++|+|++|+.||.+.+..+...++.......+. .....+.....+....+ ...|..|.
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-------------~~~~~~s~~~~~li~~l-~~~p~~R~~~ 292 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHI-------------PSQAKLSREASDLILRL-CCGAEDRLGK 292 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccC-------------CCCCCCCHHHHHHHHHH-hcCHhhcCCC
Confidence 999999999999999999988877766665432211110 00011111122222222 24688898
Q ss_pred -CHHHHH--HhhcccCC
Q 005415 681 -TLEYAA--LWLFGIDQ 694 (697)
Q Consensus 681 -t~e~~~--~wl~~~~~ 694 (697)
++++++ +|+.+++.
T Consensus 293 ~t~~ell~h~~~~~~~~ 309 (376)
T cd05598 293 NGADEIKAHPFFKGIDF 309 (376)
T ss_pred CCHHHHhCCCCcCCCCH
Confidence 889988 99987653
No 57
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-35 Score=309.18 Aligned_cols=261 Identities=27% Similarity=0.364 Sum_probs=207.6
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
..+.|++.+.||.|..++||+|+.+.+++.||||++..++ ...+.+.+|+..+..+ +||||++++-.|..+.
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~------~HPNIv~~~~sFvv~~ 97 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI------DHPNIVTYHCSFVVDS 97 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc------CCCCcceEEEEEEecc
Confidence 3568999999999999999999999999999999998543 2356777777777766 4899999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+|+||+||. |+++++++..-..+ +.+..+..|++++++||.|||.+|.||||||+.||||+. +|.|||+|||
T Consensus 98 ~LWvVmpfMa~GS~ldIik~~~~~G----l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~--dG~VkLadFg 171 (516)
T KOG0582|consen 98 ELWVVMPFMAGGSLLDIIKTYYPDG----LEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDS--DGTVKLADFG 171 (516)
T ss_pred eeEEeehhhcCCcHHHHHHHHcccc----ccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcC--CCcEEEcCce
Confidence 9999999997 67888877655444 999999999999999999999999999999999999995 9999999999
Q ss_pred Cccccccc-------cccccccCCCCCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 569 SSCFQTDN-------LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 569 la~~~~~~-------~~~~~gt~~Y~APE~l~~--~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
.+...... ..+++|++.|||||++.. .+|+.|+||||||++..||.+|..||....+..++..- .-+.|
T Consensus 172 vsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t--Lqn~p 249 (516)
T KOG0582|consen 172 VSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT--LQNDP 249 (516)
T ss_pred eeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH--hcCCC
Confidence 76432211 145789999999999654 36999999999999999999999999988887766443 34444
Q ss_pred CHHH-HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 640 DLEM-LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 640 p~e~-~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
|... ........+-|.+ .+++....|..+ -|..|.|++.++ +|++..
T Consensus 250 p~~~t~~~~~d~~k~~~k--sf~e~i~~CL~k----DP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 250 PTLLTSGLDKDEDKKFSK--SFREMIALCLVK----DPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred CCcccccCChHHhhhhcH--HHHHHHHHHhhc----CcccCCCHHHHhccHHHhhc
Confidence 4222 1111122222222 555666666554 489999999999 887743
No 58
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.9e-35 Score=314.49 Aligned_cols=245 Identities=23% Similarity=0.308 Sum_probs=193.8
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|.+..+++.||||+++... .......+|+.+++.++ ||||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------hp~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR------HPFLTALKYSFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC------CCCCCCEEEEEEcCCEEEEEE
Confidence 36999999999999999999999999998532 23345667888877764 889999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|...+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~--~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 75 EYANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK--DGHIKITDFGLCKEGI 146 (323)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEeeCCCCcccc
Confidence 99985 5555554322 2889999999999999999999999999999999999985 7889999999986532
Q ss_pred ---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 575 ---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......+......+|.
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~---------- 216 (323)
T cd05571 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---------- 216 (323)
T ss_pred cCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC----------
Confidence 2233467899999999999999999999999999999999999999988777766665432222221
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccCCC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGIDQN 695 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~~n 695 (697)
.....+..++..||. ..|..|+ ++++++ +|+...++.
T Consensus 217 ---~~~~~~~~li~~~L~----~dP~~R~~~~~~~~~~ll~h~~f~~~~~~ 260 (323)
T cd05571 217 ---TLSPEAKSLLAGLLK----KDPKQRLGGGPEDAKEIMEHRFFASINWQ 260 (323)
T ss_pred ---CCCHHHHHHHHHHcc----CCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence 112344455555554 4577777 788888 898776543
No 59
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=9.7e-35 Score=318.77 Aligned_cols=255 Identities=21% Similarity=0.263 Sum_probs=194.5
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
.|++++.||+|+||+||+|.+..+++.||||++.... .....+.+|+.+++.++ ||||+++++++.+...
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~l~~~~~~~~~ 75 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD------NEWVVKLYYSFQDKDN 75 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC------CCCeeeeEEEEecCCE
Confidence 5899999999999999999999999999999997532 33456677888888764 7899999999999999
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
+++||||+++ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~--~~~~kL~DFGl 147 (381)
T cd05626 76 LYFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL--DGHIKLTDFGL 147 (381)
T ss_pred EEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC--CCCEEEeeCcC
Confidence 9999999975 6666665332 2788899999999999999999999999999999999985 78999999998
Q ss_pred cccccc--------------------------------------------------ccccccccCCCCCchhhcCCCCCc
Q 005415 570 SCFQTD--------------------------------------------------NLCLYVQSRSYRAPEVIIGLPYDQ 599 (697)
Q Consensus 570 a~~~~~--------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ 599 (697)
+..... .....+||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 743210 011346899999999999989999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhc
Q 005415 600 KIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIR 679 (697)
Q Consensus 600 ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r 679 (697)
++|||||||++|||++|..||...+..+....++.....+.. ............++..... ....+..|
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---------~~~~~~s~~~~dli~~ll~--~~~~~~~R 296 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHI---------PPQVKLSPEAVDLITKLCC--SAEERLGR 296 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCC---------CCCCCCCHHHHHHHHHHcc--CcccccCC
Confidence 999999999999999999999988777666666532221110 0000111223333322110 12234458
Q ss_pred cCHHHHH--HhhcccCC
Q 005415 680 LTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 680 ~t~e~~~--~wl~~~~~ 694 (697)
.++++++ +|+.+.++
T Consensus 297 ~~~~~~l~hp~f~~~~~ 313 (381)
T cd05626 297 NGADDIKAHPFFSEVDF 313 (381)
T ss_pred CCHHHHhcCcccCCCCh
Confidence 8999998 88876544
No 60
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.3e-34 Score=310.31 Aligned_cols=250 Identities=24% Similarity=0.317 Sum_probs=196.1
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+|++++.||+|+||.||+|++..+++.||||+++... ........|+.++..+.+ |++|+++++++...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~i~~~~~~~~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-----PPFLTQLHSCFQTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCC-----CCceeeeEEEEEcCCE
Confidence 4899999999999999999999999999999997532 234556677777777653 4579999999999999
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
+|+||||+.+ +|...+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~ 147 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA--EGHIKIADFGM 147 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC--CCCEEEeecCc
Confidence 9999999975 5655554322 2788999999999999999999999999999999999985 78899999999
Q ss_pred cccc---ccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 570 SCFQ---TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 570 a~~~---~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
+... ........|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.......|.
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~----- 222 (324)
T cd05587 148 CKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----- 222 (324)
T ss_pred ceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC-----
Confidence 8642 22233457899999999999999999999999999999999999999998888888777654332221
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHhhhhccCH-----HHHH--HhhcccCC
Q 005415 647 GQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTL-----EYAA--LWLFGIDQ 694 (697)
Q Consensus 647 ~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~-----e~~~--~wl~~~~~ 694 (697)
.-...+..++..||... |..|.+. ++++ +|+...++
T Consensus 223 --------~~~~~~~~li~~~l~~~----P~~R~~~~~~~~~~~~~hp~~~~~~~ 265 (324)
T cd05587 223 --------SLSKEAVSICKGLLTKH----PAKRLGCGPTGERDIREHAFFRRIDW 265 (324)
T ss_pred --------CCCHHHHHHHHHHhhcC----HHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 11224445555555544 5666543 5555 77766543
No 61
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.8e-34 Score=309.27 Aligned_cols=249 Identities=23% Similarity=0.323 Sum_probs=196.6
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
|++++.||+|+||.||+|.+..+++.||||+++... .....+.+|++++..++. .+||||+++++++......
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~---l~hp~i~~~~~~~~~~~~~ 77 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS---ERHPFLVNLFACFQTEDHV 77 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc---cCCCChhceeeEEEcCCEE
Confidence 788999999999999999999999999999997532 233456677777766543 4699999999999999999
Q ss_pred EEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
|+||||+.++ |...+. . ..+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 78 ~lv~E~~~~~~L~~~~~-~------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~--~~~~kL~Dfg~~ 148 (324)
T cd05589 78 CFVMEYAAGGDLMMHIH-T------DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT--EGFVKIADFGLC 148 (324)
T ss_pred EEEEcCCCCCcHHHHhh-c------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCcEEeCcccCC
Confidence 9999999865 433332 1 12899999999999999999999999999999999999985 789999999988
Q ss_pred cccc---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
.... .......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.......|.
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~------ 222 (324)
T cd05589 149 KEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR------ 222 (324)
T ss_pred ccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC------
Confidence 6432 2233467899999999999999999999999999999999999999998888777776553322221
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGID 693 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~ 693 (697)
.....+..++..||... |..|+ ++++++ +|+...+
T Consensus 223 -------~~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~l~~~~~f~~~~ 264 (324)
T cd05589 223 -------FLSREAISIMRRLLRRN----PERRLGSGEKDAEDVKKQPFFRDIN 264 (324)
T ss_pred -------CCCHHHHHHHHHHhhcC----HhHcCCCCCCCHHHHhhCCCcCCCC
Confidence 11234555666665544 66665 577777 7776543
No 62
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=8.2e-35 Score=313.92 Aligned_cols=266 Identities=29% Similarity=0.492 Sum_probs=213.7
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~- 488 (697)
.++|++++.||.|+||.||+|.+..+++.||||++.... .....+.+|+.+++.++ ||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~ 87 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK------HENVIGLLDVFTPAT 87 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC------CCchhhhhhhhcccc
Confidence 478999999999999999999999999999999987532 22345667888888774 78999999988643
Q ss_pred -----CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 489 -----~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
...+++|++++++|..++... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~--~~~~k 158 (343)
T cd07878 88 SIENFNEVYLVTNLMGADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCELR 158 (343)
T ss_pred cccccCcEEEEeecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC--CCCEE
Confidence 457999999988887766421 2889999999999999999999999999999999999985 78899
Q ss_pred EeeCCCccccccccccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 564 IIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 564 L~DFGla~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
|+|||++...........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+.++.+..+.++.+
T Consensus 159 l~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07878 159 ILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPE 238 (343)
T ss_pred EcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9999999877666666788999999999977 468899999999999999999999999999999999999988888877
Q ss_pred HHhhccc--ccccccCC------------chhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 643 MLMQGQE--IYKYFTKE------------YDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 643 ~~~~~~~--~~~~~~~~------------~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
....... ..++.... ........+...+.+...|..|.|+++++ +|+..+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~ 305 (343)
T cd07878 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305 (343)
T ss_pred HHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence 6543211 11111100 01122334555566666788899999999 9998643
No 63
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.2e-34 Score=315.25 Aligned_cols=255 Identities=20% Similarity=0.294 Sum_probs=195.4
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
.++|++.+.||+|+||.||++.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++++...
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~------~hp~iv~~~~~~~~~ 115 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA------NSPWVVQLFCAFQDD 115 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC------CCCCEeeEEEEEEcC
Confidence 468999999999999999999999999999999997422 2233456777777765 488999999999999
Q ss_pred CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
..+++||||+. ++|.+++... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~--~~~~kL~DF 186 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK--HGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEEec
Confidence 99999999997 5676666422 1788899999999999999999999999999999999985 789999999
Q ss_pred CCccccccc----cccccccCCCCCchhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 568 GSSCFQTDN----LCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 568 Gla~~~~~~----~~~~~gt~~Y~APE~l~~~~----~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|++...... .....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+....+.+|+.....+
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~ 266 (370)
T cd05621 187 GTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL 266 (370)
T ss_pred ccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc
Confidence 998765432 12457899999999997643 7889999999999999999999999988888877776533322
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
... ....-......++..+.. -......|.++++++ +|+....
T Consensus 267 ~~p---------~~~~~s~~~~~li~~~L~--~~~~r~~R~~~~e~l~hp~~~~~~ 311 (370)
T cd05621 267 NFP---------EDVEISKHAKNLICAFLT--DREVRLGRNGVEEIKQHPFFKNDQ 311 (370)
T ss_pred CCC---------CcccCCHHHHHHHHHHcc--CchhccCCCCHHHHhcCcccCCCC
Confidence 110 000011122233322221 012223488999998 9987643
No 64
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3e-34 Score=307.47 Aligned_cols=209 Identities=26% Similarity=0.381 Sum_probs=175.4
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+|++.+.||+|+||.||+|++..+++.||||++++.. ........|..++..+. .|++|+++++++...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-----KPPFLTQLHSCFQTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCeEeeEEEEEecCCE
Confidence 4889999999999999999999999999999998542 22234455666665543 47899999999999999
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
+++||||+.+ +|...+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kL~DfG~ 147 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC--CCcEEEccCCC
Confidence 9999999974 5665554322 2888999999999999999999999999999999999985 78899999999
Q ss_pred ccccc---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhh
Q 005415 570 SCFQT---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 570 a~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~l 636 (697)
+.... .......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+....
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~ 217 (323)
T cd05616 148 CKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN 217 (323)
T ss_pred ceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence 86532 22334578999999999999999999999999999999999999999988888888776543
No 65
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.8e-34 Score=300.28 Aligned_cols=266 Identities=25% Similarity=0.361 Sum_probs=212.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.+.||.|+||.||+|.+..+++.||+|.++... .......+|+.+++.++ ||||+++++++......
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~nI~~~~~~~~~~~~~ 79 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK------HANIVTLHDIIHTEKSL 79 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcC------CCCcceEEEEEecCCeE
Confidence 57999999999999999999999999999999987432 22345677888888874 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.++|.+++..... .+++..++.++.||+.||.|||+++|+|+||||+||+++. ++.++|+|||++.
T Consensus 80 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~ 152 (301)
T cd07873 80 TLVFEYLDKDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLAR 152 (301)
T ss_pred EEEEeccccCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECC--CCcEEECcCcchh
Confidence 99999999988887754322 2788999999999999999999999999999999999985 7889999999986
Q ss_pred ccccc---cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
..... .....+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+...++.++...+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 153 AKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred ccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhh
Confidence 54322 2234568899999998764 4788999999999999999999999999999999999888888777665432
Q ss_pred cccccccc-------------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 648 QEIYKYFT-------------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 648 ~~~~~~~~-------------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
.....+.. ....+.....+...+++...|.+|.|+++++ +|+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 11111100 0112333445566666667788899999999 888643
No 66
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.5e-35 Score=312.12 Aligned_cols=256 Identities=24% Similarity=0.302 Sum_probs=200.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.+.||+|+||+||+|.+..+++.||||+++.... ....+.+|+.+++.+ +||||+++++++....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~------~~~~i~~~~~~~~~~~ 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS------NSPWIPQLQYAFQDKD 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceeeEEecCC
Confidence 369999999999999999999999999999999985432 334556677777655 4889999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..++||||+. ++|.+++..... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~--~~~~kL~Dfg 147 (330)
T cd05601 75 NLYLVMEYQPGGDLLSLLNRYED-----QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR--TGHIKLADFG 147 (330)
T ss_pred eEEEEECCCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC--CCCEEeccCC
Confidence 9999999996 567666654322 2889999999999999999999999999999999999985 7899999999
Q ss_pred Ccccccccc----ccccccCCCCCchhhc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCC
Q 005415 569 SSCFQTDNL----CLYVQSRSYRAPEVII------GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 569 la~~~~~~~----~~~~gt~~Y~APE~l~------~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
++....... ....+++.|+|||++. +..++.++|||||||++|+|++|..||...+....+.++......
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~ 227 (330)
T cd05601 148 SAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF 227 (330)
T ss_pred CCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCc
Confidence 987654321 2246899999999987 456788999999999999999999999988887777776543211
Q ss_pred CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCCC
Q 005415 639 IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQNK 696 (697)
Q Consensus 639 ~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n~ 696 (697)
.. ......-...+..++..++ . .+..|.+.++++ +|+...+++.
T Consensus 228 ~~---------~~~~~~~~~~~~~li~~ll----~-~p~~R~t~~~l~~h~~~~~~~~~~ 273 (330)
T cd05601 228 LK---------FPEDPKVSSDFLDLIQSLL----C-GQKERLGYEGLCCHPFFSKIDWNN 273 (330)
T ss_pred cC---------CCCCCCCCHHHHHHHHHHc----c-ChhhCCCHHHHhCCCCcCCCCHHH
Confidence 10 0000111223444444443 3 588999999999 9998766543
No 67
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.7e-34 Score=308.42 Aligned_cols=273 Identities=30% Similarity=0.489 Sum_probs=219.2
Q ss_pred CcceeeCc---eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCC
Q 005415 403 DLPIILNT---VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEH 476 (697)
Q Consensus 403 ~~pv~~~~---~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hp 476 (697)
++|+.+++ .+.++|++.+.||+|+||.||+|.+..+++.||||++... ........+|+.+++.++ ||
T Consensus 2 ~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~ 75 (353)
T cd07850 2 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN------HK 75 (353)
T ss_pred ceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC------CC
Confidence 56777777 4578999999999999999999999999999999998642 223345667888888774 78
Q ss_pred ceeEEEEEEEec------CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCc
Q 005415 477 HILRLYDYFYHL------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 550 (697)
Q Consensus 477 nIv~l~~~f~~~------~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~ 550 (697)
||++++++|... ...++||||+.++|.+.+... ++...+..++.||+.||.|||++||+||||||+
T Consensus 76 ~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~ 147 (353)
T cd07850 76 NIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 147 (353)
T ss_pred CCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHH
Confidence 999999998644 357999999999888776421 778889999999999999999999999999999
Q ss_pred cccccccCcceEEEeeCCCcccccccc--ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHH
Q 005415 551 NILIKSYQRCEIKIIDLGSSCFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (697)
Q Consensus 551 NILl~~~~~~~vKL~DFGla~~~~~~~--~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~ 628 (697)
||+++. ++.+||+|||++....... ....+++.|+|||.+.+..++.++|||||||++|+|++|+.||...+....
T Consensus 148 Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~ 225 (353)
T cd07850 148 NIVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ 225 (353)
T ss_pred HEEECC--CCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 999985 7889999999997654432 234578899999999999999999999999999999999999999998899
Q ss_pred HHHHHHhhCCCCHHHHhhcccccc-cccC-------------------------CchhhhhHHHHHHHHHHHhhhhccCH
Q 005415 629 LARIIGMLGPIDLEMLMQGQEIYK-YFTK-------------------------EYDLYYINEVCFANIFISLVVIRLTL 682 (697)
Q Consensus 629 l~~I~~~lg~~p~e~~~~~~~~~~-~~~~-------------------------~~~l~~i~~~cw~~l~~~~~~~r~t~ 682 (697)
+..++..++.++.++......... +... .........++....+...|..|.|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 305 (353)
T cd07850 226 WNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISV 305 (353)
T ss_pred HHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCH
Confidence 999999999988876554221111 0000 00112234566677777779999999
Q ss_pred HHHH--Hhhcc
Q 005415 683 EYAA--LWLFG 691 (697)
Q Consensus 683 e~~~--~wl~~ 691 (697)
++++ +|+..
T Consensus 306 ~eiL~~~~~~~ 316 (353)
T cd07850 306 DDALQHPYINV 316 (353)
T ss_pred HHHhcChhHhh
Confidence 9999 87764
No 68
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.3e-35 Score=289.31 Aligned_cols=252 Identities=25% Similarity=0.347 Sum_probs=211.0
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
.-.++|.+.+.||+|.||.||+|+.+.++..||+|++-++.- ...++.+|++|.. ..+||||+++|++|.
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs------~L~hpnilrlY~~fh 92 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQS------HLRHPNILRLYGYFH 92 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeec------ccCCccHHhhhhhee
Confidence 334789999999999999999999999999999999976431 2234444554444 446899999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
+...+|+++||.. |.++..+...+.. .+++.....+++|++.||.|+|.++|+||||||+|+|++. .+.+||+
T Consensus 93 d~~riyLilEya~~gel~k~L~~~~~~----~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~--~~~lkiA 166 (281)
T KOG0580|consen 93 DSKRIYLILEYAPRGELYKDLQEGRMK----RFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS--AGELKIA 166 (281)
T ss_pred ccceeEEEEEecCCchHHHHHHhcccc----cccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC--CCCeecc
Confidence 9999999999997 6777777633322 2888899999999999999999999999999999999996 8899999
Q ss_pred eCCCcccc-ccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 566 DLGSSCFQ-TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 566 DFGla~~~-~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
|||-+... .....+.+||..|.+||...+..++..+|+|++|++.||++.|.+||...+..+.+++|.+.--.+|.
T Consensus 167 dfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~--- 243 (281)
T KOG0580|consen 167 DFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPS--- 243 (281)
T ss_pred CCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCc---
Confidence 99988765 34466789999999999999999999999999999999999999999999999999999776554442
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
.+..-..+....++...+..|++..+.+ +|+..
T Consensus 244 --------------~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 244 --------------TISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred --------------ccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 2333445566777888899999999999 89864
No 69
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-36 Score=298.72 Aligned_cols=259 Identities=25% Similarity=0.361 Sum_probs=216.3
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~---~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
.+.+.|++.+.||+|.|+.|+++.+..+|+.+|+|++.. .....+.+.+|++|-+.|+ ||||++|.+.+.+
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq------HP~IvrL~~ti~~ 81 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ------HPNIVRLHDSIQE 81 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC------CCcEeehhhhhcc
Confidence 456789999999999999999999999999999999863 2335678889999999886 8899999999999
Q ss_pred cCeEEEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc-ceEEEe
Q 005415 488 LEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKII 565 (697)
Q Consensus 488 ~~~l~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~-~~vKL~ 565 (697)
....|||+|++.|+ |..-+-.. ..+++..+...++||++||.|+|.+||||||+||.|+|+.+..+ .-+||+
T Consensus 82 ~~~~ylvFe~m~G~dl~~eIV~R------~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 82 ESFHYLVFDLVTGGELFEDIVAR------EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred cceeEEEEecccchHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeec
Confidence 99999999999875 33333322 22888899999999999999999999999999999999976433 368999
Q ss_pred eCCCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 566 DLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 566 DFGla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
|||++...... ...++|||+|||||++...+|+..+|||+.|||||-|+.|.+||.+.+...++.+|++..-..|...
T Consensus 156 ~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~ 235 (355)
T KOG0033|consen 156 DFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPE 235 (355)
T ss_pred ccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcc
Confidence 99999776643 3457899999999999999999999999999999999999999999999999999987655444422
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
| ....+-.++....++..-|.+|.|+.+++ +||...++
T Consensus 236 w-------------~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~ 275 (355)
T KOG0033|consen 236 W-------------DTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRER 275 (355)
T ss_pred c-------------CcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHH
Confidence 2 13444556666777777899999999999 99986553
No 70
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-35 Score=319.10 Aligned_cols=249 Identities=26% Similarity=0.395 Sum_probs=203.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhh-hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~-~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.+|...++||+|+.|.||.|....+++.||||.+...... .+-+++|+.+++..+ |+|||++++.|...+.+|
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~------H~NiVnfl~Sylv~deLW 346 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH------HPNIVNFLDSYLVGDELW 346 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc------chHHHHHHHHhcccceeE
Confidence 5688899999999999999999999999999999865433 356779999999886 789999999999999999
Q ss_pred EEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+|||||+|+ |.+.+.... +++.++..|+++++.||.|||.+||+|||||.+|||++. ++.+||+|||+|.
T Consensus 347 VVMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~--~g~vKltDFGFca 417 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTM--DGSVKLTDFGFCA 417 (550)
T ss_pred EEEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEecc--CCcEEEeeeeeee
Confidence 999999865 445444222 889999999999999999999999999999999999996 7889999999987
Q ss_pred cccc---ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 572 FQTD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 572 ~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
.... ...+.+|||+|||||++..+.|++++||||||++++||+-|++||-..++...+..|... |+|.......
T Consensus 418 qi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~lk~~~k-- 494 (550)
T KOG0578|consen 418 QISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPKLKNPEK-- 494 (550)
T ss_pred ccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCCcCCccc--
Confidence 6543 356689999999999999999999999999999999999999999999888888887543 3333322111
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
--..++.++..| +...+..|.++.+++ +.|+.
T Consensus 495 -------lS~~~kdFL~~c----L~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 495 -------LSPELKDFLDRC----LVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred -------cCHHHHHHHHHH----hhcchhcCCCHHHHhcChhhhh
Confidence 112333343344 344477788888888 66643
No 71
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.1e-34 Score=313.46 Aligned_cols=207 Identities=23% Similarity=0.398 Sum_probs=176.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
+.|++++.||+|+||.||+|.+..+++.||||+++.. ......+..|+.++..+ +||+|+++++.+...+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l------~~~~iv~~~~~~~~~~ 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA------DGAWVVKMFYSFQDKR 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC------CCCCEeeEEEEEEcCC
Confidence 3689999999999999999999999999999999753 22344566788777766 3789999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+++||||+.+ +|.+++.... .+++..++.++.|++.||.|||++||+||||||+|||++. ++.++|+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~--~~~vkL~DfG 146 (360)
T cd05627 75 NLYLIMEFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA--KGHVKLSDFG 146 (360)
T ss_pred EEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCEEEeecc
Confidence 99999999975 6666665332 2889999999999999999999999999999999999985 7899999999
Q ss_pred Cccccccc--------------------------------------cccccccCCCCCchhhcCCCCCchhhHHHHHHHH
Q 005415 569 SSCFQTDN--------------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCIL 610 (697)
Q Consensus 569 la~~~~~~--------------------------------------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL 610 (697)
++...... ....+||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 87543211 1124689999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCcHHHHHHHHHH
Q 005415 611 AELWTGEVLFPNDAVVMILARIIG 634 (697)
Q Consensus 611 ~ELltG~~PF~~~~~~e~l~~I~~ 634 (697)
|||++|.+||.+.+....+.++..
T Consensus 227 yel~tG~~Pf~~~~~~~~~~~i~~ 250 (360)
T cd05627 227 YEMLIGYPPFCSETPQETYRKVMN 250 (360)
T ss_pred eecccCCCCCCCCCHHHHHHHHHc
Confidence 999999999999888877777654
No 72
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=310.49 Aligned_cols=258 Identities=28% Similarity=0.411 Sum_probs=224.0
Q ss_pred CceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 409 ~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
..-|.+-|.+.+.||+|-|+.|-+|++.-+|+.||||++.+.+ ....++.+|++.++.++ |||||+||.+.
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQ------HpNiVRLYEVi 86 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQ------HPNIVRLYEVI 86 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhc------CcCeeeeeehh
Confidence 4456788999999999999999999999999999999998643 34467788898888876 88999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEE
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL 564 (697)
..+..+|||+|+-. |+|.+++...... +.+..++.++.||+.|+.|+|+..+|||||||+||.+-. +-|.+||
T Consensus 87 DTQTKlyLiLELGD~GDl~DyImKHe~G-----l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE-KlGlVKL 160 (864)
T KOG4717|consen 87 DTQTKLYLILELGDGGDLFDYIMKHEEG-----LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE-KLGLVKL 160 (864)
T ss_pred cccceEEEEEEecCCchHHHHHHhhhcc-----ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee-ecCceEe
Confidence 99999999999987 5899998765432 899999999999999999999999999999999999875 6789999
Q ss_pred eeCCCcccc--ccccccccccCCCCCchhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 565 IDLGSSCFQ--TDNLCLYVQSRSYRAPEVIIGLPYD-QKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 565 ~DFGla~~~--~~~~~~~~gt~~Y~APE~l~~~~~s-~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
+|||++... +....+.+|+..|-|||+++|..|+ +++||||||||||.|++|++||+..++.+.+.+|+.+.-..|.
T Consensus 161 TDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs 240 (864)
T KOG4717|consen 161 TDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS 240 (864)
T ss_pred eeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch
Confidence 999998654 4557788999999999999999887 4799999999999999999999999999999999888777776
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCC
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQN 695 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n 695 (697)
.....+ ++..+.++...|-.|.+.|++. +||+..++.
T Consensus 241 hvS~eC-----------------rdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 241 HVSKEC-----------------RDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred hhhHHH-----------------HHHHHHHHhcCchhhccHHHHhccccccCCCCC
Confidence 554322 3455677888899999999999 999988764
No 73
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.7e-34 Score=313.38 Aligned_cols=255 Identities=20% Similarity=0.274 Sum_probs=196.5
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
.++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++...
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~------h~~iv~~~~~~~~~ 115 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN------SEWIVQLHYAFQDD 115 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC------CCCcceEEEEEecC
Confidence 468999999999999999999999999999999997532 22234567888877764 88999999999999
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
..+++||||+.+ +|..++... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~~kL~Df 186 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC--CCCEEEEec
Confidence 999999999975 566655421 1788889999999999999999999999999999999985 889999999
Q ss_pred CCccccccc----cccccccCCCCCchhhcCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 568 GSSCFQTDN----LCLYVQSRSYRAPEVIIGL----PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 568 Gla~~~~~~----~~~~~gt~~Y~APE~l~~~----~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|++...... .....|++.|+|||++.+. .++.++|||||||++|||++|.+||.+.+....+.+|+.....+
T Consensus 187 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~ 266 (370)
T cd05596 187 GTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSL 266 (370)
T ss_pred cceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcC
Confidence 998765432 2235789999999999754 37889999999999999999999999988877777775432211
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhh--ccCHHHHH--HhhcccCCC
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVI--RLTLEYAA--LWLFGIDQN 695 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~--r~t~e~~~--~wl~~~~~n 695 (697)
.. +........+..++..+. ...+.. |.++++++ +|+...+++
T Consensus 267 ~~---------~~~~~~s~~~~~li~~~L----~~~p~r~~R~s~~ell~h~~~~~~~~~ 313 (370)
T cd05596 267 TF---------PDDIEISKQAKDLICAFL----TDREVRLGRNGVDEIKSHPFFKNDQWT 313 (370)
T ss_pred CC---------CCcCCCCHHHHHHHHHHc----cChhhccCCCCHHHHhcCcccCCCChh
Confidence 10 000011223333333333 323433 88999998 998876544
No 74
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.1e-34 Score=314.48 Aligned_cols=271 Identities=23% Similarity=0.301 Sum_probs=212.0
Q ss_pred CceecCceEEEEEeccCCCCceEEEEEC--CCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 409 ~~~i~~rY~i~e~LG~G~fG~Vy~a~d~--~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
..++..+|++++.||.|+||.||+|... .+++.||+|.+.... ...+|+.+++.++ ||||+++++++.
T Consensus 87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l~------h~~iv~~~~~~~ 156 (392)
T PHA03207 87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTIS------HRAIINLIHAYR 156 (392)
T ss_pred chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhcC------CCCccceeeeEe
Confidence 3445678999999999999999999754 456889999887542 3457999998875 789999999999
Q ss_pred ecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 487 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 487 ~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
.....++|||++.++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. .+.++|+|
T Consensus 157 ~~~~~~lv~e~~~~~l~~~l~~~~------~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~--~~~~~l~D 228 (392)
T PHA03207 157 WKSTVCMVMPKYKCDLFTYVDRSG------PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE--PENAVLGD 228 (392)
T ss_pred eCCEEEEEehhcCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEcc
Confidence 999999999999999888774222 2889999999999999999999999999999999999985 78899999
Q ss_pred CCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHhhCC
Q 005415 567 LGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA---VVMILARIIGMLGP 638 (697)
Q Consensus 567 FGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~---~~e~l~~I~~~lg~ 638 (697)
||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. ....+..|++.++.
T Consensus 229 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~ 308 (392)
T PHA03207 229 FGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQV 308 (392)
T ss_pred CccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhcc
Confidence 99986544321 23568999999999999999999999999999999999999997653 45677778887776
Q ss_pred CCHHHHhhcc--------ccccc----ccC-----CchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCCCC
Q 005415 639 IDLEMLMQGQ--------EIYKY----FTK-----EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQNKI 697 (697)
Q Consensus 639 ~p~e~~~~~~--------~~~~~----~~~-----~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n~~ 697 (697)
.+.++..... ..... +.. ...+..-..+.+.+.+...|..|.++++++ +|+...++|++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~ 386 (392)
T PHA03207 309 HPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLL 386 (392)
T ss_pred CccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhh
Confidence 6654322110 00000 000 011112234445666677788999999999 99998888764
No 75
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.7e-34 Score=307.55 Aligned_cols=246 Identities=24% Similarity=0.299 Sum_probs=193.8
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|++..+++.||||+++... ........|.+++..+. +||||+++++++.....+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-----KHPFLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCeEEEEE
Confidence 36899999999999999999999999997532 23345566777776653 4899999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|...+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 76 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~--~~~~kL~Dfg~~~~~~ 147 (321)
T cd05591 76 EYVNGGDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA--EGHCKLADFGMCKEGI 147 (321)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEeecccceecc
Confidence 99985 5555554322 2788999999999999999999999999999999999985 7899999999986532
Q ss_pred c---ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 575 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 575 ~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
. ......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+......+|.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~---------- 217 (321)
T cd05591 148 LNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPV---------- 217 (321)
T ss_pred cCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----------
Confidence 1 233456899999999999989999999999999999999999999999888888777543222111
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhcc-------CHHHHH--HhhcccCCC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRL-------TLEYAA--LWLFGIDQN 695 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-------t~e~~~--~wl~~~~~n 695 (697)
.....+..++..|+. ..|..|+ ++++++ +|+...+++
T Consensus 218 ---~~~~~~~~ll~~~L~----~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~ 263 (321)
T cd05591 218 ---WLSKEAVSILKAFMT----KNPNKRLGCVASQGGEDAIKQHPFFKEIDWV 263 (321)
T ss_pred ---CCCHHHHHHHHHHhc----cCHHHcCCCCCCCCCHHHHhcCCccCCCCHH
Confidence 012234444444444 4577777 888888 898776554
No 76
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.4e-34 Score=306.99 Aligned_cols=245 Identities=24% Similarity=0.349 Sum_probs=192.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|+++.+++.||||+++... ........|+.++..+. +||||+++++++.....+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-----NHPFLTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-----CCCchhceeeEEEcCCEEEEEE
Confidence 36899999999999999999999999997532 23345566777776553 4899999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|...+.... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++....
T Consensus 76 Ey~~~g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~--~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 76 EFVNGGDLMFHIQKSR------RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDH--EGHCKLADFGMCKEGI 147 (320)
T ss_pred cCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeeCCCCeecC
Confidence 99985 5655554322 2889999999999999999999999999999999999985 7889999999986532
Q ss_pred ---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 575 ---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
.......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+......+|.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---------- 217 (320)
T cd05590 148 FNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---------- 217 (320)
T ss_pred cCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCC----------
Confidence 2233457899999999999989999999999999999999999999998888877777543222211
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhccCH------HHHH--HhhcccCC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRLTL------EYAA--LWLFGIDQ 694 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~------e~~~--~wl~~~~~ 694 (697)
.....+..++..|+. ..|..|++. ++++ +|+...++
T Consensus 218 ---~~~~~~~~li~~~L~----~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 218 ---WLSQDAVDILKAFMT----KNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred ---CCCHHHHHHHHHHcc----cCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 012234445555544 457778876 7777 89876554
No 77
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.5e-34 Score=303.93 Aligned_cols=240 Identities=26% Similarity=0.368 Sum_probs=189.9
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 422 LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
||+|+||.||+|.+..+++.||+|+++.. ........+|+.+++.++ ||||+++++++...+..++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~ 74 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN------CPFIVPLKFSFQSPEKLYLVLAF 74 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCcEeceeeEEecCCeEEEEEcC
Confidence 79999999999999999999999999753 233455667888887764 88999999999999999999999
Q ss_pred ccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccc-
Q 005415 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD- 575 (697)
Q Consensus 498 l~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~- 575 (697)
+.+ +|.+.+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 75 ~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 75 INGGELFHHLQREG------RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDY--QGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC--CCcEEEEECcccccCccC
Confidence 975 5666665322 2889999999999999999999999999999999999985 78899999999875322
Q ss_pred --ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccccc
Q 005415 576 --NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 653 (697)
Q Consensus 576 --~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~ 653 (697)
......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+......+|
T Consensus 147 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~------------- 213 (312)
T cd05585 147 DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP------------- 213 (312)
T ss_pred CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC-------------
Confidence 22345789999999999999999999999999999999999999998888777766644221111
Q ss_pred ccCCchhhhhHHHHHHHHHHHhhhhcc---CHHHHH--Hhhccc
Q 005415 654 FTKEYDLYYINEVCFANIFISLVVIRL---TLEYAA--LWLFGI 692 (697)
Q Consensus 654 ~~~~~~l~~i~~~cw~~l~~~~~~~r~---t~e~~~--~wl~~~ 692 (697)
..+...+.+...+.+...|..|+ ++++++ +|+...
T Consensus 214 ----~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 214 ----DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred ----CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 11222333444444555678886 466766 888754
No 78
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-33 Score=303.95 Aligned_cols=203 Identities=29% Similarity=0.399 Sum_probs=174.6
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
..++|++++.||+|+||.||++++..++..||+|++... ......+.+|+++++.++ ||||+++++++...+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~ 76 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN------SPYIVGFYGAFYSDG 76 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC------CCCCCeEEEEEEECC
Confidence 357899999999999999999999999999999998753 234467888999888874 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhc-CccccCCCCccccccccCcceEEEeeC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~-gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
.+++||||+.+ +|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+||+||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~--~~~~kl~Df 148 (331)
T cd06649 77 EISICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS--RGEIKLCDF 148 (331)
T ss_pred EEEEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC--CCcEEEccC
Confidence 99999999985 6666665332 278899999999999999999986 6999999999999985 788999999
Q ss_pred CCccccccc-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHH
Q 005415 568 GSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (697)
Q Consensus 568 Gla~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~ 628 (697)
|++...... .....+++.|+|||++.+..++.++|||||||++|+|++|+.||...+..+.
T Consensus 149 g~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~ 210 (331)
T cd06649 149 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210 (331)
T ss_pred cccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 998654332 3345789999999999998999999999999999999999999987766543
No 79
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.4e-34 Score=307.35 Aligned_cols=243 Identities=25% Similarity=0.334 Sum_probs=189.5
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||++.+..+++.||+|++.... .......+|+.+++.+ +||||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~~~~~~~~~~~~~lv~ 74 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT------RHPFLTSLKYSFQTKDRLCFVM 74 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceEEEEEcCCEEEEEE
Confidence 36899999999999999999999999997532 2334566777777766 4889999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|...+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 75 Ey~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~--~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 75 EYVNGGELFFHLSRER------VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK--DGHIKITDFGLCKEGI 146 (328)
T ss_pred eCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECC--CCcEEEecCcCCccCC
Confidence 99985 4544443222 2889999999999999999999999999999999999985 7889999999986532
Q ss_pred c---ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 575 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 575 ~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
. ......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+......+|.
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~---------- 216 (328)
T cd05593 147 TDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR---------- 216 (328)
T ss_pred CcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCC----------
Confidence 2 223457899999999999989999999999999999999999999888777666655332212211
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGID 693 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~ 693 (697)
.....+..++..| +...|..|+ ++++++ +|+...+
T Consensus 217 ---~~~~~~~~li~~~----L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 258 (328)
T cd05593 217 ---TLSADAKSLLSGL----LIKDPNKRLGGGPDDAKEIMRHSFFTGVN 258 (328)
T ss_pred ---CCCHHHHHHHHHH----cCCCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 1122344444444 445567776 788888 8876543
No 80
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1e-33 Score=301.33 Aligned_cols=264 Identities=25% Similarity=0.363 Sum_probs=200.9
Q ss_pred EEEeccCCCCceEEEEEC--CCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--cCeEEEE
Q 005415 419 TEYLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LEHLFIV 494 (697)
Q Consensus 419 ~e~LG~G~fG~Vy~a~d~--~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~--~~~l~LV 494 (697)
.++||+|+||.||+|+++ .+++.||+|.+..... .....+|+.+++.++ ||||+++++++.. ....++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELK------HPNVISLQKVFLSHADRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcC------CCCCcceeeeEecCCCcEEEEE
Confidence 357999999999999965 4678999999875432 245678999998875 8899999999864 4578999
Q ss_pred EEccccchHHHHHhhhccC---CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc--cCcceEEEeeCCC
Q 005415 495 CELLRANLYEFQKFNQESG---GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS--YQRCEIKIIDLGS 569 (697)
Q Consensus 495 mEyl~gsL~~~l~~~~~~~---~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~--~~~~~vKL~DFGl 569 (697)
|||+++++..++....... ....+++..++.++.||+.||.|||++||+||||||+|||+.. ...+.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 9999999888776433211 1224889999999999999999999999999999999999953 2367899999999
Q ss_pred ccccccc------cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcH---------HHHHHHHH
Q 005415 570 SCFQTDN------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---------VMILARII 633 (697)
Q Consensus 570 a~~~~~~------~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~---------~e~l~~I~ 633 (697)
+...... .....+|+.|+|||++.+. .++.++|||||||++|+|++|++||.+... ...+.++.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 238 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence 9765432 2235678999999999874 589999999999999999999999975432 46778888
Q ss_pred HhhCCCCHHHHhhcccccccc-----------cCCc----------hhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 634 GMLGPIDLEMLMQGQEIYKYF-----------TKEY----------DLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 634 ~~lg~~p~e~~~~~~~~~~~~-----------~~~~----------~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
..+|.++...+.......... .... ....-..+...+++...|..|.|+++++ +|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 888887776655432221110 0000 0011234556677777899999999999 885
No 81
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.9e-34 Score=305.02 Aligned_cols=243 Identities=23% Similarity=0.321 Sum_probs=190.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||++++..+|+.||+|+++... .......+|+.+++.++ ||||++++++|.....+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR------HPFLTALKYAFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC------CCCCcceeeEEecCCEEEEEE
Confidence 36899999999999999999999999997532 23345567777777764 789999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 75 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 75 EYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK--DGHIKITDFGLCKEGI 146 (323)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcC--CCCEEecccHHhcccc
Confidence 99985 4544443222 2889999999999999999999999999999999999985 7889999999886532
Q ss_pred c---ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 575 D---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 575 ~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
. ......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|.
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~---------- 216 (323)
T cd05595 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---------- 216 (323)
T ss_pred CCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC----------
Confidence 2 223356899999999999999999999999999999999999999988877776666432222221
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGID 693 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~ 693 (697)
.....+..++..||.. .|..|+ ++++++ +|+...+
T Consensus 217 ---~~~~~~~~li~~~L~~----dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 217 ---TLSPEAKSLLAGLLKK----DPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred ---CCCHHHHHHHHHHccC----CHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 1123455555555554 466665 777777 8877654
No 82
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1e-33 Score=303.76 Aligned_cols=208 Identities=25% Similarity=0.384 Sum_probs=174.7
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+|++.+.||+|+||.||+|+++.+++.||||+++... ........|..++..+. +|++|+++++++...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD-----KPPFLTQLHSCFQTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCchhheeeEEecCCE
Confidence 3788999999999999999999999999999998532 22345566777776654 35789999999999999
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
+|+||||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~--~~~ikL~Dfg~ 147 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS--EGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEecccc
Confidence 9999999975 5655554322 2889999999999999999999999999999999999995 78899999999
Q ss_pred cccccc---ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Q 005415 570 SCFQTD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 570 a~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~ 635 (697)
+..... ......|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~ 216 (323)
T cd05615 148 CKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH 216 (323)
T ss_pred ccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 865322 223356899999999999989999999999999999999999999998888777777653
No 83
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.9e-34 Score=310.52 Aligned_cols=209 Identities=23% Similarity=0.376 Sum_probs=175.9
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
.++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++.+ +||||+++++.+...
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~------~hp~iv~~~~~~~~~ 115 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA------NSPWVVQLFYAFQDD 115 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC------CCCCCCeEEEEEEcC
Confidence 478999999999999999999999999999999987422 2223455677777765 488999999999999
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
..+++||||+++ +|..++... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~--~~~ikL~Df 186 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADF 186 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC--CCCEEEEeC
Confidence 999999999974 566665421 1788889999999999999999999999999999999985 789999999
Q ss_pred CCccccccc----cccccccCCCCCchhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhh
Q 005415 568 GSSCFQTDN----LCLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 568 Gla~~~~~~----~~~~~gt~~Y~APE~l~~~~----~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~l 636 (697)
|++...... .....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+....+.+|+...
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~ 263 (371)
T cd05622 187 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 263 (371)
T ss_pred CceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence 998765432 22457899999999997643 7889999999999999999999999988888887776543
No 84
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.5e-34 Score=305.77 Aligned_cols=257 Identities=20% Similarity=0.265 Sum_probs=193.9
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++++.||+|+||.||++.+..+++.||+|++.+.. .....+.+|+.+++.+ +|+||+++++++....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~~ 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG------DRRWITNLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC------CCCCCCceEEEEecCC
Confidence 47999999999999999999999999999999997522 2234456677777665 4789999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
++++||||+. ++|.+++..... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg 147 (331)
T cd05597 75 NLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK--NGHIRLADFG 147 (331)
T ss_pred eEEEEEecCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC--CCCEEEEECC
Confidence 9999999996 567777653221 2888999999999999999999999999999999999985 7889999999
Q ss_pred Ccccccccc----ccccccCCCCCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 569 SSCFQTDNL----CLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 569 la~~~~~~~----~~~~gt~~Y~APE~l~~-----~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
++....... ....|++.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+..+.+..+.......
T Consensus 148 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~ 227 (331)
T cd05597 148 SCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHF 227 (331)
T ss_pred ceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcc
Confidence 986543321 22468999999999973 357889999999999999999999999888877777765432211
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
+... ........+..+++.+.. ....+..|.++++++ +|+.+.+
T Consensus 228 ~~~~--------~~~~~~~~~~~li~~ll~--~~~~r~~r~~~~~~l~hp~~~~~~ 273 (331)
T cd05597 228 QFPP--------DVTDVSEEAKDLIRRLIC--SPETRLGRNGLQDFKDHPFFEGID 273 (331)
T ss_pred cCCC--------ccCCCCHHHHHHHHHHcc--CcccccCCCCHHHHhcCCCCCCCC
Confidence 1000 000112233333333221 123334477899998 9987654
No 85
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.3e-33 Score=292.93 Aligned_cols=260 Identities=26% Similarity=0.389 Sum_probs=205.8
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++++.||.|++|.||+|.+..++..||||+++... .......+|+.+++.+. ||||+++++++..+...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ------HPNIVCLQDVLMQESRL 74 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC------CCCEeeeEEEEeeCCeE
Confidence 4899999999999999999999999999999986432 22356678888888875 88999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.+++.+++..... ...+++..++.++.||+.||.|||+++|+|+||+|+||+++. ++.++|+|||++.
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~ 149 (285)
T cd07861 75 YLIFEFLSMDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN--KGVIKLADFGLAR 149 (285)
T ss_pred EEEEecCCCCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC--CCcEEECccccee
Confidence 99999999888877754322 123889999999999999999999999999999999999985 7889999999986
Q ss_pred cccccc---ccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 572 FQTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 572 ~~~~~~---~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... ....+++.|+|||++.+. .++.++|||||||++|+|++|++||.+....+.+..+.+.++.+....+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 150 AFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred ecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 543321 223567889999998764 4788999999999999999999999999888888888887777665554432
Q ss_pred ccccccc----------------cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 648 QEIYKYF----------------TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 648 ~~~~~~~----------------~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.....+. .....+..++..||. ..|..|+|+++++ +|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 230 TSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLI----YDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhc----CChhhCCCHHHHhcCCCC
Confidence 2211110 012233345555554 4588899999998 775
No 86
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=9.3e-34 Score=303.07 Aligned_cols=244 Identities=26% Similarity=0.358 Sum_probs=187.5
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|.+..+++.||||+++... ........|..++..+ .+||||+++++++......++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-----WEHPFLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc-----cCCCCccceeeEEEcCCEEEEEE
Confidence 36999999999999999999999999998542 2223344555555433 35899999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|...+.... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~a~~~~ 147 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK--DGHIKIADFGMCKENM 147 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC--CCCEEEccCcCCeECC
Confidence 99975 5655554322 2889999999999999999999999999999999999985 7889999999986532
Q ss_pred ---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 575 ---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.......|.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~---------- 217 (316)
T cd05592 148 NGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPR---------- 217 (316)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----------
Confidence 2233457899999999999989999999999999999999999999998887777766443222111
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhccCHH-HHH--HhhcccC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRLTLE-YAA--LWLFGID 693 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e-~~~--~wl~~~~ 693 (697)
.....+..++..| +...|..|.++. +++ +|+...+
T Consensus 218 ---~~~~~~~~ll~~~----l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05592 218 ---WISKEAKDCLSKL----FERDPTKRLGVDGDIRQHPFFRGID 255 (316)
T ss_pred ---CCCHHHHHHHHHH----ccCCHHHcCCChHHHHcCcccCCCC
Confidence 0112333444444 445688888764 444 7776554
No 87
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=7.6e-34 Score=303.77 Aligned_cols=245 Identities=27% Similarity=0.367 Sum_probs=190.0
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|+++.+++.||+|+++... ........|..++..+ .+||||+++++++...+++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA-----WENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----cCCCCccCeeEEEEeCCEEEEEE
Confidence 46999999999999999999999999998542 2233455566666543 25899999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc-
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ- 573 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~- 573 (697)
||+.+ +|...+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.++|+|||++...
T Consensus 76 E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~--~~~~kl~Dfg~~~~~~ 147 (316)
T cd05620 76 EFLNGGDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR--DGHIKIADFGMCKENV 147 (316)
T ss_pred CCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEeCccCCCeecc
Confidence 99985 5655554321 2788999999999999999999999999999999999985 788999999998642
Q ss_pred --ccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 574 --TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 574 --~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
........|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.......|
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----------- 216 (316)
T cd05620 148 FGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----------- 216 (316)
T ss_pred cCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-----------
Confidence 2223446789999999999999999999999999999999999999998887776666543221111
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhccCH-HHHH--HhhcccCC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRLTL-EYAA--LWLFGIDQ 694 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~-e~~~--~wl~~~~~ 694 (697)
.. ....+..++..|| ...|..|.++ +++. +|+...++
T Consensus 217 ~~--~~~~~~~li~~~l----~~dP~~R~~~~~~~~~h~~f~~~~~ 256 (316)
T cd05620 217 RW--ITKESKDILEKLF----ERDPTRRLGVVGNIRGHPFFKTINW 256 (316)
T ss_pred CC--CCHHHHHHHHHHc----cCCHHHcCCChHHHHcCCCcCCCCH
Confidence 10 1224445555554 4558888887 4555 88876654
No 88
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-34 Score=303.80 Aligned_cols=253 Identities=26% Similarity=0.322 Sum_probs=194.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC--e
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE--H 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~--~ 490 (697)
.+|...+.||+|+||.||++.+..+|...|||.+.... ...+.+.+|+++|..++ |||||++++...... .
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~------~p~IV~~~G~~~~~~~~~ 90 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN------HPNIVQYYGSSSSRENDE 90 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC------CCCEEeeCCccccccCee
Confidence 45888899999999999999999999999999987542 22466889999999986 789999999855444 6
Q ss_pred EEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
++|.|||+. |+|.+++..... .+++..++.+++||++||.|||++|||||||||+|||++. .++.+||+|||+
T Consensus 91 ~~i~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~-~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 91 YNIFMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP-SNGDVKLADFGL 164 (313)
T ss_pred eEeeeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC-CCCeEEeccCcc
Confidence 999999998 577777765442 2899999999999999999999999999999999999995 257999999999
Q ss_pred cccccc------ccccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHhhCCCCH
Q 005415 570 SCFQTD------NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 570 a~~~~~------~~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~-~~~~e~l~~I~~~lg~~p~ 641 (697)
+..... ......||+.|||||++... ....++|||||||++.||+||.+||.. ....+.+.+|.... ..|
T Consensus 165 a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~~P- 242 (313)
T KOG0198|consen 165 AKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-SLP- 242 (313)
T ss_pred ccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-CCC-
Confidence 876552 13347899999999999953 334599999999999999999999987 34444343432211 111
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.++.. -......++..| |...+..|.|+++++ +|+...+
T Consensus 243 -------~ip~~--ls~~a~~Fl~~C----~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 243 -------EIPDS--LSDEAKDFLRKC----FKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred -------CCCcc--cCHHHHHHHHHH----hhcCcccCcCHHHHhhChhhhccc
Confidence 11111 112333444444 445588899999998 8886544
No 89
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.9e-33 Score=286.18 Aligned_cols=250 Identities=33% Similarity=0.479 Sum_probs=197.0
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhH---hHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD---QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~---~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
|++++.||+|+||+||++.+..+++.||+|++........ ...+|+.+++.++ ||||+++++++......+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~------~~~i~~~~~~~~~~~~~~ 74 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR------HPNIVQILDVFQDDNYLY 74 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT------BTTBCHEEEEEEESSEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc------cccccccccccccccccc
Confidence 8999999999999999999999999999999987643322 2345888888884 789999999999999999
Q ss_pred EEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+|||++.+ +|.+++..... +++..+..++.||+.||.+||+++|+|+||||+||+++. ++.++|+|||.+.
T Consensus 75 ~v~~~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~--~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 75 IVMEYCPGGSLQDYLQKNKP------LSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDE--NGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEETTEBHHHHHHHHSS------BBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEEST--TSEEEESSGTTTE
T ss_pred cccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccc--ccccccccccccc
Confidence 99999997 78777762222 889999999999999999999999999999999999994 8889999999986
Q ss_pred cc---ccccccccccCCCCCchhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 572 FQ---TDNLCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 572 ~~---~~~~~~~~gt~~Y~APE~l~-~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
.. ........++..|+|||++. +..++.++||||||+++|+|++|..||......+....+.+.+...........
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (260)
T PF00069_consen 147 KLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQS 226 (260)
T ss_dssp ESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccccc
Confidence 42 23344467788999999998 788999999999999999999999999987544444444333322221111100
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
......+.. ...+++...|..|++++++. ||+
T Consensus 227 ------~~~~~~l~~----li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 227 ------REKSEELRD----LIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp ------TTSHHHHHH----HHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ------chhHHHHHH----HHHHHccCChhHCcCHHHHhcCCCC
Confidence 000123334 44444556699999999999 886
No 90
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.4e-33 Score=301.81 Aligned_cols=244 Identities=25% Similarity=0.331 Sum_probs=192.5
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||+||+|.+..+++.||||+++... ........|+.+++.+. +||||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-----KHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCEEEEEE
Confidence 36999999999999999999999999998542 23445667777777664 4899999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|...+.... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~ 147 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDS--EGHIKIADFGMCKEGI 147 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECC--CCcEEecccCCCeecC
Confidence 99975 5555443321 2889999999999999999999999999999999999985 7889999999886422
Q ss_pred ---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 575 ---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
.......+++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.......|.
T Consensus 148 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~---------- 217 (318)
T cd05570 148 LGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR---------- 217 (318)
T ss_pred cCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC----------
Confidence 2223356899999999999999999999999999999999999999988877777666442221111
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhccCH-----HHHH--HhhcccC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRLTL-----EYAA--LWLFGID 693 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~-----e~~~--~wl~~~~ 693 (697)
.....+..++..||. ..|..|.+. ++++ +|+...+
T Consensus 218 ---~~~~~~~~li~~~l~----~dP~~R~s~~~~~~~~ll~~~~~~~~~ 259 (318)
T cd05570 218 ---WLSKEAKSILKSFLT----KNPEKRLGCLPTGEQDIKGHPFFREID 259 (318)
T ss_pred ---cCCHHHHHHHHHHcc----CCHHHcCCCCCCCHHHHhcCCCcCCCC
Confidence 112345555555554 457788887 7777 8887654
No 91
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.4e-33 Score=292.90 Aligned_cols=262 Identities=29% Similarity=0.403 Sum_probs=205.1
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++.+.||.|+||.||+|.+..+|+.||+|.++... .....+.+|+.+++.++ ||||+++++++......
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK------HKNIVRLYDVLHSDKKL 74 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcC------CCCeeeHHHHhccCCce
Confidence 5899999999999999999999999999999987432 22345667888888874 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++|+||++++|.+.+..... .+++..++.++.||+.||.|||+++|+||||||+||+++. ++.++|+|||++.
T Consensus 75 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~ 147 (284)
T cd07839 75 TLVFEYCDQDLKKYFDSCNG-----DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINK--NGELKLADFGLAR 147 (284)
T ss_pred EEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcC--CCcEEECccchhh
Confidence 99999999988887654321 2889999999999999999999999999999999999995 7889999999987
Q ss_pred ccccc---cccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCC-CCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVL-FPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~P-F~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
..... .....+++.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+..+.+..+.+.++.++...+..
T Consensus 148 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07839 148 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPG 227 (284)
T ss_pred ccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHH
Confidence 54332 22345688899999987754 78999999999999999998777 577777888888888888777665543
Q ss_pred cccccccc-----cC-------CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 647 GQEIYKYF-----TK-------EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 647 ~~~~~~~~-----~~-------~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
......+- .. ...+..-+.+...+.+...|.+|+|+++++ +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 228 VSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 22211110 00 011222233444444445689999999998 774
No 92
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.9e-34 Score=303.96 Aligned_cols=244 Identities=23% Similarity=0.307 Sum_probs=191.3
Q ss_pred EEeccCCCCceEEEEEC---CCCcEEEEEEEecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 420 EYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~---~~g~~VAVKii~~~~-----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+.||+|+||.||++++. .+++.||||+++... ........|+.+++.++ ||||+++++++......
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~iv~~~~~~~~~~~~ 75 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK------HPFIVDLIYAFQTGGKL 75 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC------CCchhceeeEEecCCeE
Confidence 67999999999999864 478999999997532 22345567888888774 88999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
|+||||+.+ +|.+.+.... .+.+..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~ 147 (323)
T cd05584 76 YLILEYLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA--QGHVKLTDFGLC 147 (323)
T ss_pred EEEEeCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEeeCcCC
Confidence 999999985 5666554322 2778889999999999999999999999999999999985 789999999998
Q ss_pred ccccc---ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
..... ......|++.|+|||++.+..++.++|||||||++|||++|+.||.+.+....+..+.......|.
T Consensus 148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~------ 221 (323)
T cd05584 148 KESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP------ 221 (323)
T ss_pred eecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC------
Confidence 64322 223356899999999999988999999999999999999999999988887777776543222221
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccCC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGIDQ 694 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~~ 694 (697)
.....+..++..||.. .|..|. ++++++ +|+....+
T Consensus 222 -------~~~~~~~~li~~~l~~----~p~~R~~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 222 -------YLTPEARDLLKKLLKR----NPSSRLGAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred -------CCCHHHHHHHHHHccc----CHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 1123455565555554 466776 788887 88765443
No 93
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-34 Score=273.36 Aligned_cols=264 Identities=28% Similarity=0.397 Sum_probs=221.5
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|.-.++||+|.||+||+|++..+++.||+|.++.+. ......++||.+|++++ |.|||++++...+.+.+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelk------hknivrl~dvlhsdkkl 76 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK------HKNIVRLHDVLHSDKKL 76 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhh------hcceeehhhhhccCcee
Confidence 4666789999999999999999999999999998543 33457889999999997 67999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
-+|+|||...|..+...... .+..+.++.++.|+++||.|+|++++.||||||.|+||+. +|.+||+|||+++
T Consensus 77 tlvfe~cdqdlkkyfdslng-----~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~--ngelkladfglar 149 (292)
T KOG0662|consen 77 TLVFEFCDQDLKKYFDSLNG-----DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINR--NGELKLADFGLAR 149 (292)
T ss_pred EEeHHHhhHHHHHHHHhcCC-----cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEecc--CCcEEecccchhh
Confidence 99999999988887765432 2889999999999999999999999999999999999995 9999999999998
Q ss_pred ccccccc---cccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 572 FQTDNLC---LYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 572 ~~~~~~~---~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
..+.... ..+-|.+|++|.++.|.. |+...|+||.|||+.|+.. |++.|++.+..+++.+|...+|.|..+.|+.
T Consensus 150 afgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps 229 (292)
T KOG0662|consen 150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPS 229 (292)
T ss_pred hcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCc
Confidence 8776543 346689999999998865 8999999999999999998 9999999999999999999999999988877
Q ss_pred ccccccc-----ccCCchhh-------hhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 647 GQEIYKY-----FTKEYDLY-------YINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 647 ~~~~~~~-----~~~~~~l~-------~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
....+.| +.....|. ..-++..++++.-.|..|.++|.++ ++...
T Consensus 230 ~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d 288 (292)
T KOG0662|consen 230 MTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD 288 (292)
T ss_pred cccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence 6555544 11112222 2235666666666788899999988 65543
No 94
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9.4e-34 Score=303.86 Aligned_cols=243 Identities=24% Similarity=0.316 Sum_probs=188.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||++.+..+++.||+|++.... ........|+++++.+ +||||+++++++.....+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~------~hp~i~~~~~~~~~~~~~~lv~ 74 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS------RHPFLTALKYSFQTHDRLCFVM 74 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCCceEEEEEcCCEEEEEE
Confidence 36899999999999999999999999997532 2234455666666655 4889999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
||+.+ +|...+.... .+++..++.++.||+.||.|||+ +||+||||||+|||++. ++.+||+|||++...
T Consensus 75 E~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~--~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 75 EYANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK--DGHIKITDFGLCKEG 146 (325)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC--CCCEEEecCCCCeec
Confidence 99985 4544443222 28899999999999999999997 79999999999999985 788999999998643
Q ss_pred c---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 574 T---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 574 ~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
. .......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+......+|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~--------- 217 (325)
T cd05594 147 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--------- 217 (325)
T ss_pred CCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCC---------
Confidence 2 2223457899999999999999999999999999999999999999988777666665432222211
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccC
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGID 693 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~ 693 (697)
.-...+..++..||. ..|..|+ ++++++ +|+.+..
T Consensus 218 ----~~~~~~~~li~~~L~----~dP~~R~~~~~~~~~~il~h~~~~~~~ 259 (325)
T cd05594 218 ----TLSPEAKSLLSGLLK----KDPKQRLGGGPDDAKEIMQHKFFAGIV 259 (325)
T ss_pred ----CCCHHHHHHHHHHhh----cCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence 112344455555544 4577776 788887 8887654
No 95
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.1e-33 Score=303.20 Aligned_cols=248 Identities=23% Similarity=0.311 Sum_probs=188.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHH-HHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKL-LKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~i-L~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
+.||+|+||+||+|.+..+++.||||++..... ....+..|..+ ++. .+||||+++++.+...+..++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~------l~hp~iv~~~~~~~~~~~~~lv 74 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKN------VKHPFLVGLHYSFQTADKLYFV 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhh------CCCCCCCCeeEEEEeCCEEEEE
Confidence 369999999999999999999999999975321 12233333332 232 3589999999999999999999
Q ss_pred EEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 495 mEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
|||+.+ +|...+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~--~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 75 LDYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (323)
T ss_pred EcCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeccCCCccc
Confidence 999985 5555554322 2888999999999999999999999999999999999985 789999999998643
Q ss_pred c---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 574 T---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 574 ~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
. .......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.......+.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--------- 217 (323)
T cd05575 147 IEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP--------- 217 (323)
T ss_pred ccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---------
Confidence 2 2223456899999999999999999999999999999999999999988887777776542111110
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
.....+..++..|+......++..+...++++ +|+....+
T Consensus 218 ----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~ 259 (323)
T cd05575 218 ----NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW 259 (323)
T ss_pred ----CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 11334555666666655555555555556777 88765443
No 96
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-33 Score=303.53 Aligned_cols=249 Identities=23% Similarity=0.331 Sum_probs=188.4
Q ss_pred ceEEEEEeccCCCCceEEEEEC---CCCcEEEEEEEecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~---~~g~~VAVKii~~~~-----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
+|++++.||+|+||.||++++. .+++.||+|++.... ........|+.+++.++ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~~i~~~~~~~~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR-----QSPFLVTLHYAFQ 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCcccEEEEEe
Confidence 4899999999999999999864 478999999997532 22345667888888775 3789999999999
Q ss_pred ecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 487 ~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
....+++||||+.+ +|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~--~~~~kl~ 147 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS--EGHVVLT 147 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECC--CCCEEEe
Confidence 99999999999975 6666664322 2889999999999999999999999999999999999985 7899999
Q ss_pred eCCCcccccc----ccccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHhh
Q 005415 566 DLGSSCFQTD----NLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAV----VMILARIIGML 636 (697)
Q Consensus 566 DFGla~~~~~----~~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~----~e~l~~I~~~l 636 (697)
|||++..... ......||+.|+|||++.+.. ++.++|||||||++|+|++|..||..... ......+....
T Consensus 148 DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 227 (332)
T cd05614 148 DFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCD 227 (332)
T ss_pred eCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCC
Confidence 9999865322 122357899999999998754 78899999999999999999999965322 22222222211
Q ss_pred CCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccC
Q 005415 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGID 693 (697)
Q Consensus 637 g~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~ 693 (697)
.+.+. .....+..++..||. ..|..|. ++++++ +|+...+
T Consensus 228 ~~~~~-------------~~~~~~~~li~~~l~----~dp~~R~~~~~~~~~~~l~h~~~~~~~ 274 (332)
T cd05614 228 PPFPS-------------FIGPEAQDLLHKLLR----KDPKKRLGAGPQGASEIKEHPFFKGLD 274 (332)
T ss_pred CCCCC-------------CCCHHHHHHHHHHcC----CCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 11110 012234445554544 4477777 778888 8987654
No 97
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.9e-33 Score=302.35 Aligned_cols=257 Identities=22% Similarity=0.285 Sum_probs=193.1
Q ss_pred ecCceEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~-----~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~ 484 (697)
-.++|++.++||.|+||.||+|.+. .+++.||||+++... .....+.+|+.++..+. +||||++++++
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~ 79 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG-----NHLNVVNLLGA 79 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc-----cCcceeeEEeE
Confidence 3578999999999999999999752 345789999997532 33456788999998884 38999999998
Q ss_pred EEec-CeEEEEEEccc-cchHHHHHhhhccC-------------------------------------------------
Q 005415 485 FYHL-EHLFIVCELLR-ANLYEFQKFNQESG------------------------------------------------- 513 (697)
Q Consensus 485 f~~~-~~l~LVmEyl~-gsL~~~l~~~~~~~------------------------------------------------- 513 (697)
+... ..+++||||+. ++|.+++.......
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T cd05102 80 CTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNP 159 (338)
T ss_pred ecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCccccc
Confidence 8764 46899999997 56777765422100
Q ss_pred -------CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccccc-----cccc
Q 005415 514 -------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYV 581 (697)
Q Consensus 514 -------~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~ 581 (697)
....+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||+++...... ....
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 237 (338)
T cd05102 160 PQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGSAR 237 (338)
T ss_pred chhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC--CCcEEEeecccccccccCcchhcccCCC
Confidence 0123778889999999999999999999999999999999985 7889999999987543221 1233
Q ss_pred ccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchh
Q 005415 582 QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDL 660 (697)
Q Consensus 582 gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l 660 (697)
+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+.+...+.....+. ..-.....+
T Consensus 238 ~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l 306 (338)
T cd05102 238 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR-----------APENATPEI 306 (338)
T ss_pred CCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC-----------CCCCCCHHH
Confidence 4678999999999999999999999999999997 9999987654433333222111110 001233467
Q ss_pred hhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 661 YYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 661 ~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
..++..||... |..|+++.++...|.
T Consensus 307 ~~li~~cl~~d----p~~RPs~~el~~~l~ 332 (338)
T cd05102 307 YRIMLACWQGD----PKERPTFSALVEILG 332 (338)
T ss_pred HHHHHHHccCC----hhhCcCHHHHHHHHH
Confidence 78888888765 777888888875544
No 98
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-34 Score=325.95 Aligned_cols=262 Identities=22% Similarity=0.267 Sum_probs=215.9
Q ss_pred cCceEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~-----~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
..+-+..+.||+|+||+||+|+-. .....||||.++... ....++.+|+.++..++ |||||+|+|++
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~------H~nIVrLlGVC 558 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQ------HPNIVRLLGVC 558 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhcc------CCCeEEEEEEE
Confidence 345677889999999999999753 245679999998643 35678999999999986 78999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhccCC--------CcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQESGG--------EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~--------~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~ 556 (697)
..++.+++|+|||. |+|.+++........ ..+++..+.+.|+.||+.||.||-++.+|||||..+|+||..
T Consensus 559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGE 638 (774)
T ss_pred ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceecc
Confidence 99999999999997 789999876443211 223888999999999999999999999999999999999995
Q ss_pred cCcceEEEeeCCCcccccccccccc-----ccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHH
Q 005415 557 YQRCEIKIIDLGSSCFQTDNLCLYV-----QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 630 (697)
Q Consensus 557 ~~~~~vKL~DFGla~~~~~~~~~~~-----gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~ 630 (697)
...|||+|||+++..-......+ -+.+|||||.|....|+.++||||+||+|||+++ |..||.+.+.++++.
T Consensus 639 --~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 639 --NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred --ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 88999999999976443332222 2678999999999999999999999999999999 999999999999998
Q ss_pred HHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcccCC
Q 005415 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFGIDQ 694 (697)
Q Consensus 631 ~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~~~~ 694 (697)
.|.+ ++.....-+++..+|.+|..||......+|.......++..|....+.
T Consensus 717 ~i~~------------g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 717 CIRA------------GQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred HHHc------------CCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 8854 233333346788999999999999866666666666666688776554
No 99
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.6e-33 Score=298.74 Aligned_cols=244 Identities=27% Similarity=0.388 Sum_probs=188.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|++..+++.||||+++... ........|..++..+ .+||||+++++++...+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-----WEHPFLTHLYCTFQTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----cCCCcCcceEEEEEeCCEEEEEE
Confidence 36999999999999999999999999998642 2233445566666543 35899999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|..++.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~ 147 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT--DGHIKIADFGMCKENM 147 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEccCCcceECC
Confidence 99974 6666654322 2788899999999999999999999999999999999985 7889999999986432
Q ss_pred ---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 575 ---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.......|
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----------- 216 (316)
T cd05619 148 LGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----------- 216 (316)
T ss_pred CCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-----------
Confidence 223345789999999999998999999999999999999999999998887776666532211111
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhccCHH-HHH--HhhcccC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRLTLE-YAA--LWLFGID 693 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e-~~~--~wl~~~~ 693 (697)
.. ....+..++..|| ...|..|+++. ++. +|+...+
T Consensus 217 ~~--~~~~~~~li~~~l----~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 217 RW--LTREAKDILVKLF----VREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred cc--CCHHHHHHHHHHh----ccCHhhcCCChHHHHcCcccCCCC
Confidence 11 1223445555554 44578888885 555 7876543
No 100
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.4e-33 Score=301.86 Aligned_cols=209 Identities=22% Similarity=0.320 Sum_probs=173.9
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.+.||+|+||.||++++..+++.||+|++.... .....+.+|+.++..+ .|++|+++++++...+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~l~~~~~~~~ 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG------DCQWITTLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC------CCCCEeeEEEEEEcCC
Confidence 47999999999999999999999999999999997532 1223355666666554 4889999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..|+||||+. ++|..++..... .+++..+..++.|++.||.|||+++|+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~Ey~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~--~~~~kl~DfG 147 (331)
T cd05624 75 YLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM--NGHIRLADFG 147 (331)
T ss_pred EEEEEEeCCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC--CCCEEEEecc
Confidence 9999999997 567776654222 2788999999999999999999999999999999999985 7889999999
Q ss_pred Ccccccccc----ccccccCCCCCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Q 005415 569 SSCFQTDNL----CLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 569 la~~~~~~~----~~~~gt~~Y~APE~l~~-----~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~ 635 (697)
++....... ....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++...
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~ 223 (331)
T cd05624 148 SCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 223 (331)
T ss_pred ceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcC
Confidence 986554321 23468999999999876 45788999999999999999999999988887777776543
No 101
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.2e-33 Score=300.81 Aligned_cols=258 Identities=19% Similarity=0.256 Sum_probs=194.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|+++++||+|+||.||+++++.+++.||+|++.+.. .....+.+|+.++..+ +|++|+++++++....
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~~ 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG------DNQWITTLHYAFQDEN 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC------CCCCEeeEEEEEecCC
Confidence 36999999999999999999999999999999997422 1223345566666554 4889999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+++||||+. ++|.+++..... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~--~~~~kL~DfG 147 (332)
T cd05623 75 NLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM--NGHIRLADFG 147 (332)
T ss_pred EEEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEeecc
Confidence 9999999996 567777654322 2788899999999999999999999999999999999984 7889999999
Q ss_pred Cccccccc----cccccccCCCCCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 569 SSCFQTDN----LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 569 la~~~~~~----~~~~~gt~~Y~APE~l~-----~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
++...... .....||+.|+|||++. ...++.++|||||||++|||++|+.||.+.+..+.+.++......+
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~ 227 (332)
T cd05623 148 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF 227 (332)
T ss_pred hheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc
Confidence 98653221 12356899999999986 3457889999999999999999999999988888887775432221
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
+... ........+..++..+... ......|.++++++ +|+.+.++
T Consensus 228 ~~p~--------~~~~~s~~~~~li~~ll~~--~~~r~~r~~~~~~~~h~~f~~~~~ 274 (332)
T cd05623 228 QFPA--------QVTDVSEDAKDLIRRLICS--REHRLGQNGIEDFKQHPFFTGIDW 274 (332)
T ss_pred cCCC--------ccccCCHHHHHHHHHHccC--hhhhcCCCCHHHHhCCCCcCCCCH
Confidence 1000 0001122333344333321 22334467888888 99887654
No 102
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.4e-33 Score=291.32 Aligned_cols=256 Identities=22% Similarity=0.214 Sum_probs=189.4
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 422 LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
||+|+||+||++.+..+++.||+|.+.... .....+..|+.+++.++ |+||+++++++......++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~~~lv~e~ 74 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH------SRFIVSLAYAFQTKTDLCLVMTI 74 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC------CCcEeeeeEEEcCCCeEEEEEeC
Confidence 799999999999999999999999987532 22345567888888774 78999999999999999999999
Q ss_pred ccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+.+ +|...+..... ....+++..+..++.||+.||.|||+++|+||||||+||+++. ++.++|+|||++......
T Consensus 75 ~~~g~L~~~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 75 MNGGDLRYHIYNVDE--ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCccceecCCC
Confidence 985 45444432211 1233889999999999999999999999999999999999985 788999999998654332
Q ss_pred ---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccccc
Q 005415 577 ---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 653 (697)
Q Consensus 577 ---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~ 653 (697)
.....+++.|+|||++.+..++.++|||||||++|+|++|+.||...........+.......+... .
T Consensus 151 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~-- 221 (280)
T cd05608 151 QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTY-------P-- 221 (280)
T ss_pred CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCC-------c--
Confidence 2235688999999999999999999999999999999999999986543222222221111111100 0
Q ss_pred ccCCchhhhhHHHHHHHHHHHhhhhcc-CHHHHH--HhhcccCCCC
Q 005415 654 FTKEYDLYYINEVCFANIFISLVVIRL-TLEYAA--LWLFGIDQNK 696 (697)
Q Consensus 654 ~~~~~~l~~i~~~cw~~l~~~~~~~r~-t~e~~~--~wl~~~~~n~ 696 (697)
-.....+..++..||......++..+. ++++++ +|+++.++.+
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~ 267 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQ 267 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhH
Confidence 012235566666666554333333222 888888 9998876543
No 103
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=6.3e-33 Score=293.75 Aligned_cols=262 Identities=21% Similarity=0.272 Sum_probs=198.8
Q ss_pred ecCceEEEEEeccCCCCceEEEEECC----------------CCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCC
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLH----------------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPA 473 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~----------------~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~ 473 (697)
..++|++.++||+|+||.||+|.+.. ++..||+|++... ......+.+|+.++..++
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~----- 77 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK----- 77 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC-----
Confidence 35789999999999999999997532 3457999998763 333456778888888774
Q ss_pred CCCceeEEEEEEEecCeEEEEEEccc-cchHHHHHhhhccC-------------CCcccCHHHHHHHHHHHHHHHHHHHh
Q 005415 474 DEHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESG-------------GEAYFTLGRLQVITRQCLEALEYLHS 539 (697)
Q Consensus 474 ~hpnIv~l~~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~-------------~~~~ls~~~i~~i~~qIa~aL~yLHs 539 (697)
||||+++++++...+..++||||+. ++|.+++....... ....+++..+..++.||+.||.|||+
T Consensus 78 -h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 156 (304)
T cd05096 78 -DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS 156 (304)
T ss_pred -CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999997 46777665432111 11236788899999999999999999
Q ss_pred cCccccCCCCccccccccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHH
Q 005415 540 LGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614 (697)
Q Consensus 540 ~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELl 614 (697)
.||+||||||+|||++. ++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|+
T Consensus 157 ~~ivH~dlkp~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 157 LNFVHRDLATRNCLVGE--NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred CCccccCcchhheEEcC--CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence 99999999999999995 7889999999987543221 1233467899999999888999999999999999998
Q ss_pred h--CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 615 T--GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 615 t--G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
+ +..||.+.+..+.+..+............ ..........+..++..||... |..|++++++..+|.
T Consensus 235 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~~----p~~RPs~~~i~~~l~ 303 (304)
T cd05096 235 MLCKEQPYGELTDEQVIENAGEFFRDQGRQVY-----LFRPPPCPQGLYELMLQCWSRD----CRERPSFSDIHAFLT 303 (304)
T ss_pred HccCCCCCCcCCHHHHHHHHHHHhhhcccccc-----ccCCCCCCHHHHHHHHHHccCC----chhCcCHHHHHHHHh
Confidence 7 67899887776666555433211111000 0111123456788888888865 888999999887764
No 104
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=8e-33 Score=290.81 Aligned_cols=254 Identities=23% Similarity=0.238 Sum_probs=195.8
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
.|++.++||+|+||+||++.+..+++.||||++.... .....+.+|+.+++.++ ||||+++++.+..++.
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~ 74 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN------SRFVVSLAYAYETKDA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC------CCCEeeeeeeecCCCe
Confidence 4889999999999999999999999999999987532 12234567888888774 7899999999999999
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
+++||||+.+ +|...+.... ...+++..+..++.|++.||.|||+.+|+||||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~~l~Dfg~ 148 (285)
T cd05605 75 LCLVLTLMNGGDLKFHIYNMG----NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD--YGHIRISDLGL 148 (285)
T ss_pred EEEEEeccCCCcHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC--CCCEEEeeCCC
Confidence 9999999975 5555543221 123889999999999999999999999999999999999985 78899999999
Q ss_pred ccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 570 a~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
+...... .....+++.|+|||++.+..++.++||||+||++|+|++|+.||.+.........+.......+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----- 223 (285)
T cd05605 149 AVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEE----- 223 (285)
T ss_pred ceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccc-----
Confidence 8765332 223578899999999998889999999999999999999999998876654444433322111110
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGID 693 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~ 693 (697)
... .-...+..++..||... |..|. ++++++ +|+...+
T Consensus 224 --~~~--~~~~~~~~li~~~l~~~----P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 224 --YSE--KFSEAARSICRQLLTKD----PGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred --cCc--ccCHHHHHHHHHHccCC----HHHhcCCCCCCHHHHhcCcCccCCC
Confidence 000 11234566666666654 67777 788887 8887643
No 105
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=8.6e-33 Score=293.63 Aligned_cols=264 Identities=25% Similarity=0.362 Sum_probs=199.0
Q ss_pred EEEeccCCCCceEEEEECC--CCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--cCeEEEE
Q 005415 419 TEYLGSAAFSKVFQAQDLH--TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LEHLFIV 494 (697)
Q Consensus 419 ~e~LG~G~fG~Vy~a~d~~--~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~--~~~l~LV 494 (697)
..+||+|+||.||+|.+.. ++..||+|.+..... .....+|+.+++.++ ||||+++++++.. ....++|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELK------HPNVIALQKVFLSHSDRKVWLL 78 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCC------CCCeeeEEEEEeccCCCeEEEE
Confidence 3579999999999998653 668999999875432 245678999988875 7899999999864 4678999
Q ss_pred EEccccchHHHHHhhhccC---CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc--cCcceEEEeeCCC
Q 005415 495 CELLRANLYEFQKFNQESG---GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS--YQRCEIKIIDLGS 569 (697)
Q Consensus 495 mEyl~gsL~~~l~~~~~~~---~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~--~~~~~vKL~DFGl 569 (697)
|||+++++.+++....... ....+++..++.++.||+.||.|||+.+|+||||||+|||+.. ..++.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 9999999888876433211 1224788899999999999999999999999999999999943 1367899999999
Q ss_pred ccccccc------cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcH---------HHHHHHHH
Q 005415 570 SCFQTDN------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---------VMILARII 633 (697)
Q Consensus 570 a~~~~~~------~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~---------~e~l~~I~ 633 (697)
++..... .....+++.|+|||++.+. .++.++|||||||++|||+||++||..... ...+.++.
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 238 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF 238 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence 9765432 2234678999999999774 588999999999999999999999975432 35677788
Q ss_pred HhhCCCCHHHHhhcccccccccCC----------ch-----------hhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 634 GMLGPIDLEMLMQGQEIYKYFTKE----------YD-----------LYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 634 ~~lg~~p~e~~~~~~~~~~~~~~~----------~~-----------l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
..++.+..+.+........+.... .. ......+....++...|..|.|+++++ +|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 888877766655433222211110 00 111233455666777789999999998 885
No 106
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.2e-33 Score=300.99 Aligned_cols=247 Identities=23% Similarity=0.323 Sum_probs=188.6
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHH-HHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKL-LKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~i-L~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
+.||+|+||+||+|.+..+|+.||+|++.... .....+..|..+ ++. .+||||+++++++...+..++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~hp~iv~~~~~~~~~~~~~lv 74 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKN------VKHPFLVGLHYSFQTTEKLYFV 74 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHh------CCCCCCccEEEEEecCCEEEEE
Confidence 36899999999999999999999999997532 122233344332 232 3589999999999999999999
Q ss_pred EEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 495 mEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
|||+.+ +|...+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~--~~~~kL~DfG~~~~~ 146 (325)
T cd05604 75 LDFVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (325)
T ss_pred EcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEeecCCcccC
Confidence 999986 4544443221 2889999999999999999999999999999999999985 789999999998643
Q ss_pred c---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 574 T---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 574 ~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
. .......|++.|+|||++.+..++.++|||||||++|+|++|..||...+..+.+..+....-..+.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~--------- 217 (325)
T cd05604 147 IAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRP--------- 217 (325)
T ss_pred CCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCC---------
Confidence 2 2233457899999999999999999999999999999999999999988877777666542111110
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.....+..++..++......++..+.+.++++ +|+...+
T Consensus 218 ----~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~ 258 (325)
T cd05604 218 ----GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLS 258 (325)
T ss_pred ----CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCC
Confidence 11234455666666666555566666667777 7876543
No 107
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-32 Score=310.86 Aligned_cols=251 Identities=22% Similarity=0.228 Sum_probs=197.3
Q ss_pred cCceEEEEEeccCCCCceEEEEECCC-CcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHT-GVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~-g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
...|.+.+.||+|++|.||+|.+..+ ++.||+|.+.... .....+..|+.+++.++ ||||+++++++...+.
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~------Hpniv~~~~~~~~~~~ 139 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACD------HFGIVKHFDDFKSDDK 139 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCC------CCCEeEEEEEEEECCE
Confidence 34599999999999999999998877 7889999775433 33345567888887764 8899999999999999
Q ss_pred EEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.||||||+. ++|.+.+..... ...++++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||+
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~--~~~~kL~DFgl 215 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP--TGIIKLGDFGF 215 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC--CCcEEEEeCcC
Confidence 999999997 567666543221 1234888999999999999999999999999999999999995 78899999999
Q ss_pred ccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 570 SCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 570 a~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
+...... ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.....++.+
T Consensus 216 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~--- 292 (478)
T PTZ00267 216 SKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFP--- 292 (478)
T ss_pred ceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---
Confidence 9765432 23356899999999999999999999999999999999999999988887777776543221111
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
......+..++..||. ..|..|.+.++++ +|+
T Consensus 293 ---------~~~s~~~~~li~~~L~----~dP~~Rps~~~~l~~~~~ 326 (478)
T PTZ00267 293 ---------CPVSSGMKALLDPLLS----KNPALRPTTQQLLHTEFL 326 (478)
T ss_pred ---------ccCCHHHHHHHHHHhc----cChhhCcCHHHHHhCHHH
Confidence 0112345566666654 4477788887776 554
No 108
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.8e-32 Score=287.65 Aligned_cols=263 Identities=26% Similarity=0.364 Sum_probs=203.8
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.+.||.|++|.||+|.++.+++.||||.+..... ......+|+.+++.++ |+||+++++++......
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~ 78 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLK------HANIVTLHDIIHTKKTL 78 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCC------CcceeeEEEEEecCCeE
Confidence 679999999999999999999998999999999875321 2234567999998875 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.++|.+++..... .+++..++.++.|++.||.|||+++|+||||||+||+++. ++.+||+|||++.
T Consensus 79 ~lv~e~~~~~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~ 151 (291)
T cd07844 79 TLVFEYLDTDLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISE--RGELKLADFGLAR 151 (291)
T ss_pred EEEEecCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcC--CCCEEECcccccc
Confidence 99999999888877654322 3789999999999999999999999999999999999985 7889999999986
Q ss_pred ccccc---cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHHhhCCCCHHHHhh
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~-~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
..... .....++..|+|||++.+ ..++.++||||||+++|+|++|+.||.+.. ..+.+..+...++.+....+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07844 152 AKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPG 231 (291)
T ss_pred ccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhh
Confidence 54321 122345788999999876 458899999999999999999999998765 5677777888888777766544
Q ss_pred cccccccccCC-------------chhh--hhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 647 GQEIYKYFTKE-------------YDLY--YINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 647 ~~~~~~~~~~~-------------~~l~--~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
......+.... ..+. ....+...+.+...|..|.++++++ +|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 232 VSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 33222111110 0111 1112333444455688899999887 774
No 109
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-34 Score=306.34 Aligned_cols=253 Identities=26% Similarity=0.374 Sum_probs=210.4
Q ss_pred CceEEE--EEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 414 GRYYVT--EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 414 ~rY~i~--e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
.-|+|. +.||+|.||+||-|++.++|+.||||++.+- .....++.+|+.||+.+. ||.||.+--.|+..
T Consensus 562 tvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~------HPGiV~le~M~ET~ 635 (888)
T KOG4236|consen 562 TVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH------HPGIVNLECMFETP 635 (888)
T ss_pred HHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC------CCCeeEEEEeecCC
Confidence 446664 7899999999999999999999999999752 344578889999999986 78999999999999
Q ss_pred CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc-ceEEEeeC
Q 005415 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-CEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~-~~vKL~DF 567 (697)
+.+++|||-+.|+.++.+....... +++...+.++.||+.||.|||-++|+|+||||+|||+.+.+. ..+|||||
T Consensus 636 ervFVVMEKl~GDMLEMILSsEkgR----L~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDF 711 (888)
T KOG4236|consen 636 ERVFVVMEKLHGDMLEMILSSEKGR----LPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDF 711 (888)
T ss_pred ceEEEEehhhcchHHHHHHHhhccc----chHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccc
Confidence 9999999999999999887665433 888888999999999999999999999999999999986433 47999999
Q ss_pred CCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHHhhCCCCHHHH
Q 005415 568 GSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 568 Gla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~-~~e~l~~I~~~lg~~p~e~~ 644 (697)
|+|+..+.. ....+|||.|+|||++..++|....|+||+|||+|--++|..||..+. ..++++.-.=+ -||..|
T Consensus 712 GfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFM--yPp~PW- 788 (888)
T KOG4236|consen 712 GFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFM--YPPNPW- 788 (888)
T ss_pred cceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccc--cCCCch-
Confidence 999988764 456799999999999999999999999999999999999999996543 33444432111 122111
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
.++....-+...+++.-+...|.+.+..+ +||.++
T Consensus 789 -------------~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 789 -------------SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred -------------hhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 23444556777888889999999999998 999865
No 110
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.3e-33 Score=299.65 Aligned_cols=201 Identities=27% Similarity=0.416 Sum_probs=164.5
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHH-HHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIK-LLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~-iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
+.||+|+||+||+|++..+++.||+|++..... ....+..|.. +++. .+||||+++++++...+.+++|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~h~~Iv~~~~~~~~~~~~~lv 74 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKN------VKHPFLVGLHFSFQTADKLYFV 74 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHh------CCCCCCCceeEEEEcCCeEEEE
Confidence 369999999999999999999999999975321 1122233332 2222 3589999999999999999999
Q ss_pred EEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 495 mEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
|||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~--~~~~kl~DfG~a~~~ 146 (325)
T cd05602 75 LDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKEN 146 (325)
T ss_pred EeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEEccCCCCccc
Confidence 999986 5555554322 2778889999999999999999999999999999999985 788999999998643
Q ss_pred c---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Q 005415 574 T---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 634 (697)
Q Consensus 574 ~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~ 634 (697)
. .......|++.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+..
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 210 (325)
T cd05602 147 IEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 210 (325)
T ss_pred ccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence 2 123345789999999999999999999999999999999999999998888877777654
No 111
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.1e-33 Score=303.71 Aligned_cols=249 Identities=20% Similarity=0.253 Sum_probs=190.6
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 422 LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
||+|+||+||+|++..+++.||||++..... .......|..++..+. ..+||||+++++++......++||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~~p~i~~~~~~~~~~~~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL---LDESPFIVGLKFSFQTDSDLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc---cCCCCcCcceEEEEecCCeEEEEEcC
Confidence 7999999999999999999999999975321 1223344555555443 22589999999999999999999999
Q ss_pred ccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccc-
Q 005415 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD- 575 (697)
Q Consensus 498 l~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~- 575 (697)
+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.++|+|||++.....
T Consensus 78 ~~~g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 78 MSGGELFWHLQKEG------RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA--TGHIALCDFGLSKANLTD 149 (330)
T ss_pred CCCChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEecCCcCcCCCCC
Confidence 975 5665554322 2889999999999999999999999999999999999985 78899999999865322
Q ss_pred --ccccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccc
Q 005415 576 --NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYK 652 (697)
Q Consensus 576 --~~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~ 652 (697)
......|++.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.+..+......++..
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~---------- 219 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN---------- 219 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCc----------
Confidence 22345789999999999765 48899999999999999999999999888777776664332222211
Q ss_pred cccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 653 YFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 653 ~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.-...+..++..||......++..+.++++++ +|+...+
T Consensus 220 --~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 220 --VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred --cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 11234556666666666555555556888888 8987554
No 112
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.6e-33 Score=298.65 Aligned_cols=245 Identities=23% Similarity=0.312 Sum_probs=183.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHH-HHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIK-LLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~-iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
+.||+|+||.||+|++..+++.||+|++..... ....+..|.. +++. .+||||+++++++...+..++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~h~~iv~~~~~~~~~~~~~lv 74 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKN------LKHPFLVGLHYSFQTAEKLYFV 74 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHh------CCCCCccceeeEEEcCCEEEEE
Confidence 369999999999999999999999999975321 1223333433 2333 3589999999999999999999
Q ss_pred EEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 495 mEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
|||+.+ +|...+.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 75 LDYVNGGELFFHLQRER------CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (321)
T ss_pred EcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEccCCCCccC
Confidence 999986 4544443221 2788899999999999999999999999999999999985 789999999998653
Q ss_pred cc---ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 574 TD---NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 574 ~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
.. ......|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+.......+....-..|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~--------- 217 (321)
T cd05603 147 VEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPG--------- 217 (321)
T ss_pred CCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCC---------
Confidence 21 223457899999999999988999999999999999999999999988877776666432211111
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
.....+..++..|+......++..+.+..++. +|+..
T Consensus 218 ----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 218 ----GKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred ----CCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 11234555555665555444444444455555 66543
No 113
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.1e-34 Score=286.07 Aligned_cols=252 Identities=26% Similarity=0.372 Sum_probs=209.8
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---------hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---------~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~ 484 (697)
++|.-.+.||.|..+.|.++.++.+|..+|+|++.-. ....+.-..|+.||+++. +||+|+.+.++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-----GHP~II~l~D~ 91 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-----GHPYIIDLQDV 91 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-----CCCcEEEeeee
Confidence 4566678899999999999999999999999998631 123345567999999986 69999999999
Q ss_pred EEecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 485 FYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 485 f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
|++...+++|+|.|+ |.|.+++...-. +++...++|++|++.|+.|||.++||||||||+|||++. +..+|
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts~Vt------lSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILldd--n~~i~ 163 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTSKVT------LSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDD--NMNIK 163 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhhhee------ecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecc--ccceE
Confidence 999999999999997 678888865433 899999999999999999999999999999999999994 88999
Q ss_pred EeeCCCcccccc--ccccccccCCCCCchhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Q 005415 564 IIDLGSSCFQTD--NLCLYVQSRSYRAPEVIIG------LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 564 L~DFGla~~~~~--~~~~~~gt~~Y~APE~l~~------~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~ 635 (697)
|+|||+++.... .....+|||+|+|||.+.- .+|+..+|+|++|||+|.|+.|.+||.......++..|++.
T Consensus 164 isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG 243 (411)
T KOG0599|consen 164 ISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG 243 (411)
T ss_pred EeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc
Confidence 999999987654 3556899999999999852 35899999999999999999999999988888888888775
Q ss_pred hCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 636 lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
.-.+..+.|. +...-..+...+++.--|.+|.|.++++ +|+.+
T Consensus 244 kyqF~speWa-------------dis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 244 KYQFRSPEWA-------------DISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred ccccCCcchh-------------hccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 5544443332 2223345566677777799999999999 88854
No 114
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.3e-33 Score=299.63 Aligned_cols=189 Identities=24% Similarity=0.396 Sum_probs=161.3
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|.+..+++.||||+++... .....+..|+.+++.+. +||||+++++++.....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS-----NHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCCCceEEEEEcCCEEEEEE
Confidence 36899999999999999999999999998532 23345667888887764 4899999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc-
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ- 573 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~- 573 (697)
||+++ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 76 e~~~~g~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 76 EFVSGGDLMFHMQRQR------KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGI 147 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEECcCccccccc
Confidence 99985 5555544322 2899999999999999999999999999999999999985 788999999998642
Q ss_pred --ccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005415 574 --TDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFP 621 (697)
Q Consensus 574 --~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~ 621 (697)
........|++.|+|||++.+..++.++|+|||||++|+|++|+.||.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred cCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 222334678999999999999999999999999999999999999996
No 115
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.3e-32 Score=285.10 Aligned_cols=263 Identities=30% Similarity=0.462 Sum_probs=210.9
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++.+.||.|++|.||+|.+..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ------HPYVVKLLDVFPHGSGF 74 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC------CCCCcceeeEEecCCee
Confidence 5899999999999999999999999999999987532 23456778888888775 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||++++|.+++.... ..+++..++.++.||+.||.|||+.+|+|+||||+||+++. ++.++|+|||.+.
T Consensus 75 ~~v~e~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~--~~~~~l~dfg~~~ 147 (286)
T cd07832 75 VLVMEYMPSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA--DGVLKIADFGLAR 147 (286)
T ss_pred EEEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC--CCcEEEeeeeecc
Confidence 9999999778888775433 22889999999999999999999999999999999999995 7889999999987
Q ss_pred ccccc----cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 572 FQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 572 ~~~~~----~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
..... .....++..|+|||.+.+. .++.++|||||||++|+|++|.+||.+......+.++++.++.+....+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07832 148 LFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPG 227 (286)
T ss_pred cccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhh
Confidence 65433 2335678899999998754 468999999999999999999999999998899999999888877755543
Q ss_pred ccccccc----ccCC---------chhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 647 GQEIYKY----FTKE---------YDLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 647 ~~~~~~~----~~~~---------~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
......+ +... ......+.+-...++...|.+|.++++++ +|+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 228 LTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 2221111 0000 11223444555555566799999999998 8874
No 116
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.6e-33 Score=300.88 Aligned_cols=245 Identities=27% Similarity=0.351 Sum_probs=193.1
Q ss_pred EEeccCCCCceEEEEEC---CCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 420 EYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~---~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
+.||+|+||.||++++. .+++.||+|++.... ........|+.+++.++ ||||+++++++.....+|+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~l 75 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVN------HPFIVKLHYAFQTEGKLYL 75 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCC------CCCcccEEEEEEcCCEEEE
Confidence 57999999999999863 578999999998533 12334566888877764 8899999999999999999
Q ss_pred EEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
||||+. ++|.+.+.... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++..
T Consensus 76 v~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~ 147 (318)
T cd05582 76 ILDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKE 147 (318)
T ss_pred EEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC--CCcEEEeeccCCcc
Confidence 999997 56666654322 2889999999999999999999999999999999999985 78899999999865
Q ss_pred cccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccc
Q 005415 573 QTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (697)
Q Consensus 573 ~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~ 649 (697)
.... .....|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+.......|.
T Consensus 148 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~-------- 219 (318)
T cd05582 148 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ-------- 219 (318)
T ss_pred cCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCC--------
Confidence 4332 23357899999999999988999999999999999999999999988888777776543332221
Q ss_pred ccccccCCchhhhhHHHHHHHHHHHhhhhccC-----HHHHH--HhhcccCCC
Q 005415 650 IYKYFTKEYDLYYINEVCFANIFISLVVIRLT-----LEYAA--LWLFGIDQN 695 (697)
Q Consensus 650 ~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t-----~e~~~--~wl~~~~~n 695 (697)
.....+..++..||.. .|..|.+ +++++ +|+...+++
T Consensus 220 -----~~~~~~~~li~~~l~~----~P~~R~~a~~~~~~~~~~~~~~~~~~~~ 263 (318)
T cd05582 220 -----FLSPEAQSLLRALFKR----NPANRLGAGPDGVEEIKRHPFFSTIDWN 263 (318)
T ss_pred -----CCCHHHHHHHHHHhhc----CHhHcCCCCCCCHHHHhCCCCcCCCCHH
Confidence 1123455555555554 4777777 66676 888765543
No 117
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1e-32 Score=290.24 Aligned_cols=253 Identities=25% Similarity=0.296 Sum_probs=194.3
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
.|++.+.||+|+||.||++.+..+++.||+|.+.... ........|+.+++.++ |++|+++++.+...+.
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~ 74 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN------SRFVVSLAYAYETKDA 74 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC------CCCeeeeeEEEecCCE
Confidence 3788899999999999999999999999999987532 22234567888888774 7899999999999999
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.++||||+.+ +|..++..... ..+++..+..++.|++.||.|||+.+|+||||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~--~~~~~l~Dfg~ 148 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD--HGHIRISDLGL 148 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeccc
Confidence 9999999975 56665543222 22888999999999999999999999999999999999985 77899999999
Q ss_pred ccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH---HHHHHHHHhhCCCCHHHH
Q 005415 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVV---MILARIIGMLGPIDLEML 644 (697)
Q Consensus 570 a~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~---e~l~~I~~~lg~~p~e~~ 644 (697)
+...... .....|+..|+|||++.+..++.++|||||||++|+|++|+.||...... +....+... .+..
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~-- 223 (285)
T cd05630 149 AVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---VQEE-- 223 (285)
T ss_pred eeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh---hhhh--
Confidence 8654332 22346899999999999989999999999999999999999999865432 222222111 1110
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccC-----HHHHH--HhhcccCCC
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLT-----LEYAA--LWLFGIDQN 695 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t-----~e~~~--~wl~~~~~n 695 (697)
... .....+..++..||.. .|..|.+ +++++ +|+...++.
T Consensus 224 -----~~~--~~~~~~~~li~~~l~~----~p~~R~s~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05630 224 -----YSE--KFSPDARSLCKMLLCK----DPKERLGCQGGGAREVKEHPLFKQINFK 270 (285)
T ss_pred -----cCc--cCCHHHHHHHHHHhhc----CHHHccCCCCCchHHHHcChhhhccCHH
Confidence 000 1123456666666665 4777887 78888 899875543
No 118
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2e-32 Score=287.94 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=203.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.+.||+|++|.||++.+..+++.||+|++.... .....+.+|+++++.+. ||||+++++++....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR------HPFLVNLYGSFQDDS 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCccceeeEEEcCC
Confidence 46999999999999999999999999999999987532 23456777888888774 789999999999999
Q ss_pred eEEEEEEcc-ccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl-~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..++||||+ +++|.+++.... .++...+..++.||+.||.|||++||+|+||+|+||+++. ++.+||+|||
T Consensus 75 ~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~dfg 146 (290)
T cd05580 75 NLYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS--DGYIKITDFG 146 (290)
T ss_pred eEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC--CCCEEEeeCC
Confidence 999999999 467777765442 2889999999999999999999999999999999999985 7889999999
Q ss_pred CccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 569 SSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 569 la~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
++...........+++.|+|||.+.+..++.++||||||+++|+|++|..||...+......++.....+.|.
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------- 219 (290)
T cd05580 147 FAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS------- 219 (290)
T ss_pred CccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc-------
Confidence 9987665555567889999999998888899999999999999999999999888876666666532222221
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhh-hccCHHHHH--Hhhccc
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVV-IRLTLEYAA--LWLFGI 692 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~-~r~t~e~~~--~wl~~~ 692 (697)
. ....+..++..||......++. .+.+++++. +|+...
T Consensus 220 ----~--~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 220 ----F--FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred ----c--CCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 1 1456777888887765443331 123777777 776543
No 119
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.4e-33 Score=298.45 Aligned_cols=189 Identities=25% Similarity=0.402 Sum_probs=159.6
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|.+..+++.||+|+++.. ......+..|+.++..+. +||||+++++++......++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC-----CCCcCCceeeEEEeCCEEEEEE
Confidence 3699999999999999999999999999853 223345566777766553 4899999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|...+.... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++....
T Consensus 76 E~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~--~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 76 EYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGL 147 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCCEEEeeCCcccccc
Confidence 99985 4544443221 2889999999999999999999999999999999999985 7899999999986532
Q ss_pred ---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005415 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFP 621 (697)
Q Consensus 575 ---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~ 621 (697)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 22334678999999999999999999999999999999999999995
No 120
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-33 Score=295.54 Aligned_cols=255 Identities=23% Similarity=0.316 Sum_probs=205.9
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
-..|++++.||+|.-|+||+++...++..+|+|++.+. .....+...|.+||+.+. ||.++.||..|+..
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD------HPFlPTLYa~fet~ 149 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD------HPFLPTLYASFETD 149 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC------CCccchhhheeecc
Confidence 46789999999999999999999999999999999864 234456677888888874 89999999999999
Q ss_pred CeEEEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
...|+|||||.|+ |..+++... ...+++..++.++.+++.||+|||-.|||.|||||+||||.. +|+|.|+||
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQp----~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvre--dGHIMLsDF 223 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQP----GKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVRE--DGHIMLSDF 223 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhCC----CCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEec--CCcEEeeec
Confidence 9999999999865 444444322 234999999999999999999999999999999999999995 999999999
Q ss_pred CCccccc----------------------------------c-c------------------------cccccccCCCCC
Q 005415 568 GSSCFQT----------------------------------D-N------------------------LCLYVQSRSYRA 588 (697)
Q Consensus 568 Gla~~~~----------------------------------~-~------------------------~~~~~gt~~Y~A 588 (697)
.++.... . . ...++||-.|+|
T Consensus 224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA 303 (459)
T KOG0610|consen 224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA 303 (459)
T ss_pred cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence 9753200 0 0 012577888999
Q ss_pred chhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHH
Q 005415 589 PEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCF 668 (697)
Q Consensus 589 PE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw 668 (697)
||++.|.+.+.++|.|+|||+||||+.|..||.|.+..+.+.+|+..--.+|. .+....-.++..
T Consensus 304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~---------------~~~vs~~akDLI 368 (459)
T KOG0610|consen 304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPE---------------EPEVSSAAKDLI 368 (459)
T ss_pred ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCC---------------CCcchhHHHHHH
Confidence 99999999999999999999999999999999999999999998654333332 223445567788
Q ss_pred HHHHHHhhhhccC----HHHHH--HhhcccCC
Q 005415 669 ANIFISLVVIRLT----LEYAA--LWLFGIDQ 694 (697)
Q Consensus 669 ~~l~~~~~~~r~t----~e~~~--~wl~~~~~ 694 (697)
..++.+.|..|+- +.++. +...+.+|
T Consensus 369 r~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW 400 (459)
T KOG0610|consen 369 RKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW 400 (459)
T ss_pred HHHhccChhhhhccccchHHhhcCccccCCCh
Confidence 8888888999888 44444 44444433
No 121
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3e-32 Score=286.22 Aligned_cols=266 Identities=27% Similarity=0.396 Sum_probs=208.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++|++.+.||+|+||.||+|.+..+++.||||.++... .....+.+|+.+++.+.+ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~i~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSE-----SIYIVRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccC-----CCCccceeeeEeecCC
Confidence 46999999999999999999999999999999987532 223467789999988853 6899999999987665
Q ss_pred -----EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 491 -----LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 491 -----l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
.|+||||+.+++.+++...... ....+++..++.++.||+.||.|||+++|+||||+|+||+++. +++.+||+
T Consensus 76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-~~~~~kl~ 153 (295)
T cd07837 76 NGKPSLYLVFEYLDSDLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-QKGLLKIA 153 (295)
T ss_pred CCCceEEEEeeccCcCHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec-CCCeEEEe
Confidence 8999999999888887654322 1234899999999999999999999999999999999999984 36789999
Q ss_pred eCCCccccccc---cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 566 DLGSSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 566 DFGla~~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
|||.+...... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|.+||.+.+....+.++...++.++.
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
T cd07837 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233 (295)
T ss_pred ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 99998754322 122356788999999865 45789999999999999999999999999888888888888777766
Q ss_pred HHHhhcccccccc---------------cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 642 EMLMQGQEIYKYF---------------TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 642 e~~~~~~~~~~~~---------------~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
..+........+. .....+..++..||. ..|..|+++++++ +|+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~----~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLR----YDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHcc----CChhhcCCHHHHhcCCCcC
Confidence 5543321111110 112334445555554 4588899999998 8873
No 122
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.4e-34 Score=290.89 Aligned_cols=266 Identities=27% Similarity=0.414 Sum_probs=214.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCC----cEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g----~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
..|++++.||+|.||.||+|..+.+. +.+|||.++..+ .......+|+.++++++ ||||+.|..+|.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~------h~nvi~Lv~Vfl 97 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELK------HPNVISLVKVFL 97 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhc------CCcchhHHHHHh
Confidence 36899999999999999999655443 378999998542 22346678999999997 789999999998
Q ss_pred e-cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc--CcceEE
Q 005415 487 H-LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY--QRCEIK 563 (697)
Q Consensus 487 ~-~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~--~~~~vK 563 (697)
. +..+++++||.+.+|++.++....... ..++...++.|+.||+.|+.|||++-|+||||||.|||+..+ ..|.||
T Consensus 98 ~~d~~v~l~fdYAEhDL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 98 SHDKKVWLLFDYAEHDLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred ccCceEEEEehhhhhhHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeE
Confidence 7 788999999999999999998776655 458889999999999999999999999999999999999742 358999
Q ss_pred EeeCCCccccccccc------cccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcH---------HH
Q 005415 564 IIDLGSSCFQTDNLC------LYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAV---------VM 627 (697)
Q Consensus 564 L~DFGla~~~~~~~~------~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~---------~e 627 (697)
|+|||+++....... ..+-|.+|+|||.++|.. |+.++||||+|||+.||+|-++.|.+... .+
T Consensus 177 IaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred eecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 999999988765533 246689999999999875 99999999999999999999999987542 57
Q ss_pred HHHHHHHhhCCCCHHHHhhccccccc-----------ccCC--chhhhh-------HHHHHHHHHHHhhhhccCHHHHH
Q 005415 628 ILARIIGMLGPIDLEMLMQGQEIYKY-----------FTKE--YDLYYI-------NEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 628 ~l~~I~~~lg~~p~e~~~~~~~~~~~-----------~~~~--~~l~~i-------~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
++.+|.+.+|.|....|+.-++.+++ ++.. ..+++. .-+....++.-.|..|.|+++|+
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAl 335 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQAL 335 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHh
Confidence 99999999999998877765444433 2221 011111 23344455555688899999999
No 123
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-32 Score=295.09 Aligned_cols=203 Identities=28% Similarity=0.404 Sum_probs=173.7
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
..++|++.++||.|+||.||++.+..++..+|+|++... ......+.+|+++++.++ ||||++++++|...+
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~ 76 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN------SPYIVGFYGAFYSDG 76 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC------CCcccceeEEEEECC
Confidence 457899999999999999999999999999999998753 233456788999998874 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhc-CccccCCCCccccccccCcceEEEeeC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~-gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
.+++||||+. ++|.+++.... .+++..+..++.|++.||.|||+. +|+|+||||+|||++. ++.+||+||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~--~~~~kL~Df 148 (333)
T cd06650 77 EISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDF 148 (333)
T ss_pred EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC--CCCEEEeeC
Confidence 9999999997 47777765432 278889999999999999999985 7999999999999985 788999999
Q ss_pred CCccccccc-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHH
Q 005415 568 GSSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (697)
Q Consensus 568 Gla~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~ 628 (697)
|++...... .....++..|+|||++.+..++.++|+|||||++|+|++|+.||......+.
T Consensus 149 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~ 210 (333)
T cd06650 149 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKEL 210 (333)
T ss_pred CcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence 998654332 2345688999999999998899999999999999999999999987665443
No 124
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.9e-32 Score=288.51 Aligned_cols=263 Identities=30% Similarity=0.401 Sum_probs=208.7
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~------~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+|++.+.||.|++|.||+|.+..+++.||||.++.... ....+..|+.+++.++ |+||+++++++...
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~ 74 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK------HPNIIGLLDVFGHK 74 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC------CCCChhhhheeecC
Confidence 58899999999999999999999999999999975432 2234556777777664 78999999999999
Q ss_pred CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 489 ~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..+++||||+.++|.+++.... ..+++..+..++.||++||.|||++||+|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~~lv~e~~~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg 147 (298)
T cd07841 75 SNINLVFEFMETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS--DGVLKLADFG 147 (298)
T ss_pred CEEEEEEcccCCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcC--CCCEEEccce
Confidence 9999999999778887775432 13889999999999999999999999999999999999995 7889999999
Q ss_pred Cccccccc---cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 569 SSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 569 la~~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
++...... .....+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+..+.+.++...++.+....+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (298)
T cd07841 148 LARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENW 227 (298)
T ss_pred eeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhh
Confidence 98765432 223355778999999865 45789999999999999999999999988888888888888877777665
Q ss_pred hhccccccccc---------------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 645 MQGQEIYKYFT---------------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 645 ~~~~~~~~~~~---------------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
........+.. ....+..++..||. ..|..|.++++++ +|+....+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~~P~~R~s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 228 PGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLT----LNPNKRITARQALEHPYFSNDPA 290 (298)
T ss_pred hhcccccccccccccCCcchhhhcccccHHHHHHHHHHhc----CCcccCcCHHHHhhCccccCCCC
Confidence 54322222211 12234445555555 4588899999999 88886443
No 125
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.4e-32 Score=285.00 Aligned_cols=263 Identities=25% Similarity=0.354 Sum_probs=202.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.+.||+|+||.||+|.+..++..||+|++.... .......+|+.+++.++ |+||+++++++......
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~~~~ 78 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK------HANIVLLHDIIHTKETL 78 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcC------CCCEeEEEEEEecCCeE
Confidence 67999999999999999999999999999999987532 22235667888888774 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.+++...+..... .+++..+..++.|++.||.|||+.+|+|+||||+||+++. ++.++|+|||++.
T Consensus 79 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~Dfg~~~ 151 (291)
T cd07870 79 TFVFEYMHTDLAQYMIQHPG-----GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY--LGELKLADFGLAR 151 (291)
T ss_pred EEEEecccCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC--CCcEEEecccccc
Confidence 99999999888877653321 2678888999999999999999999999999999999985 7889999999886
Q ss_pred ccccc---cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHHhhCCCCHHHHhh
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~-~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
..... .....+++.|+|||.+.+. .++.++|||||||++|+|++|..||.+.+ ..+.+.++....+.++..++..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 152 AKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred ccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhh
Confidence 54322 2234568899999998764 47889999999999999999999997654 4577777778788776665443
Q ss_pred cccccccccCC---------------chhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 647 GQEIYKYFTKE---------------YDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 647 ~~~~~~~~~~~---------------~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
......+.... .....-..+...+++...|..|.|+++++ +|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 32222111110 00011223334445555688899999998 775
No 126
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.5e-32 Score=312.04 Aligned_cols=253 Identities=21% Similarity=0.223 Sum_probs=196.7
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
..++|++.+.||+|+||+||+|.+..+++.||||++... ........+|+.++..+ .|+||++++..+...
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~------~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC------DFFSIVKCHEDFAKK 103 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC------CCCcEEEeecceecc
Confidence 357999999999999999999999999999999998753 23334556677666654 488999998877643
Q ss_pred C--------eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc
Q 005415 489 E--------HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 559 (697)
Q Consensus 489 ~--------~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~ 559 (697)
. .+++||||+. ++|.+.+...... ...+++..+..++.|++.||.|||+++|+||||||+|||++. +
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~--~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~--~ 179 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKT--NRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS--N 179 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC--C
Confidence 2 3789999997 5777776543322 234889999999999999999999999999999999999985 7
Q ss_pred ceEEEeeCCCccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Q 005415 560 CEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 634 (697)
Q Consensus 560 ~~vKL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~ 634 (697)
+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+..
T Consensus 180 ~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~ 259 (496)
T PTZ00283 180 GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA 259 (496)
T ss_pred CCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence 88999999998654322 2345789999999999999999999999999999999999999999888777776654
Q ss_pred hhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 635 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 635 ~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
....+.+ -.....+..++..||.. .|..|+++++++ +|..
T Consensus 260 ~~~~~~~------------~~~~~~l~~li~~~L~~----dP~~RPs~~ell~~p~~~ 301 (496)
T PTZ00283 260 GRYDPLP------------PSISPEMQEIVTALLSS----DPKRRPSSSKLLNMPICK 301 (496)
T ss_pred CCCCCCC------------CCCCHHHHHHHHHHccc----ChhhCcCHHHHHhCHHHH
Confidence 3221100 01233555666666653 477888888876 5543
No 127
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.4e-32 Score=285.44 Aligned_cols=268 Identities=26% Similarity=0.379 Sum_probs=208.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++|++.+.||.|++|.||+|.++.+++.||+|.+.... .....+.+|+.+++.++ ||||+++++++.....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 75 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ------HGNIVRLQDVVHSEKR 75 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhcc------CCCEeeEEEEEecCCe
Confidence 57999999999999999999999999999999986432 22345677888888774 7899999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
.++||||+++++.+.+..... ..+++..+..++.||+.||.|||+++|+|+||+|+||+++. .++.+||+|||++
T Consensus 76 ~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~-~~~~~kl~dfg~~ 150 (294)
T PLN00009 76 LYLVFEYLDLDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR-RTNALKLADFGLA 150 (294)
T ss_pred EEEEEecccccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC-CCCEEEEcccccc
Confidence 999999999888877654322 12678888899999999999999999999999999999984 3567999999998
Q ss_pred cccccc---cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
...... .....+++.|+|||.+.+. .++.++|||||||++|+|++|.+||...+..+.+.++....+.+....+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 151 RAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred cccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 654322 2234567889999998764 578999999999999999999999999888888888888888777666543
Q ss_pred cccccccccC------------CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 647 GQEIYKYFTK------------EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 647 ~~~~~~~~~~------------~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
......+... .+.....+.+...+.+...|..|.++++++ +|+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 2222221100 011122233344444445688899999998 888654
No 128
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.9e-32 Score=294.29 Aligned_cols=190 Identities=23% Similarity=0.385 Sum_probs=161.8
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|.+..+++.||+|+++... .....+..|+.++..+. .||+|+++++++.....+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS-----SNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc-----CCCCEeeEEEEEEeCCEEEEEE
Confidence 36999999999999999999999999998542 23345667888777764 3789999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDA--DGHIKLTDYGMCKEGL 147 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC--CCCEEEeccccceecc
Confidence 99975 5555554322 2889999999999999999999999999999999999985 7889999999986532
Q ss_pred ---cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005415 575 ---DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN 622 (697)
Q Consensus 575 ---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~ 622 (697)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 148 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred CCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 223446789999999999999999999999999999999999999953
No 129
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5e-32 Score=282.58 Aligned_cols=259 Identities=27% Similarity=0.396 Sum_probs=201.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++|++.+.||+|++|.||+|.+..+++.||+|++.... .....+.+|+.+++.++ |+||+++++++.....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~ 74 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLK------HPNLVNLIEVFRRKRK 74 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCC------CCCEeeeeeEEeeCCE
Confidence 47999999999999999999999999999999986432 22345678888888774 7899999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
.++||||++++++..+..... .+++..++.++.||+.||.|||+++|+|+||||+||+++. ++.++|+|||++
T Consensus 75 ~~~v~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~ 147 (286)
T cd07847 75 LHLVFEYCDHTVLNELEKNPR-----GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK--QGQIKLCDFGFA 147 (286)
T ss_pred EEEEEeccCccHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC--CCcEEECccccc
Confidence 999999999877665543221 2889999999999999999999999999999999999985 788999999998
Q ss_pred ccccccc---ccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 571 CFQTDNL---CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 571 ~~~~~~~---~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
....... ....++..|+|||.+.+ ..++.++||||||+++|+|++|.+||.+.+..+.+..+...++.........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07847 148 RILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI 227 (286)
T ss_pred eecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 7654332 23456788999999876 4578899999999999999999999999888887777776665544322111
Q ss_pred ccc--------cc---------ccc-cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 647 GQE--------IY---------KYF-TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 647 ~~~--------~~---------~~~-~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
... .. ..+ .-...+..++..||. ..|..|.++++++ +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 228 FSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQ----MDPTERLSCEELLEHPYF 286 (286)
T ss_pred cccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhc----CCccccCCHHHHhcCCCC
Confidence 000 00 000 112344455556654 4488899999988 764
No 130
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-35 Score=308.64 Aligned_cols=251 Identities=26% Similarity=0.347 Sum_probs=200.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..|+.++.||+|+||.||+|.+..+++.||+|++..+ ......+.+|+.+|..++ ++||.++|+.|..+..+
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~------~~~it~yygsyl~g~~L 86 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCD------SPNITEYYGSYLKGTKL 86 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcC------cchHHhhhhheeecccH
Confidence 4688889999999999999999999999999999854 344567888999998886 57999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
+++||||.| ++.++++.... +.+..+..++++++.||.|||..+.+|||||+.|||+.. .|.+||+|||.+
T Consensus 87 wiiMey~~gGsv~~lL~~~~~------~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~--~g~vkl~DfgVa 158 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGNI------LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSE--SGDVKLADFGVA 158 (467)
T ss_pred HHHHHHhcCcchhhhhccCCC------CccceeeeehHHHHHHhhhhhhcceecccccccceeEec--cCcEEEEeccee
Confidence 999999984 56666654332 477788889999999999999999999999999999996 699999999998
Q ss_pred cccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... ..+++||+.|||||++.+..|+.|+||||||++.+||++|.+||....+..++..|-+ ..||.
T Consensus 159 ~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk--~~PP~------ 230 (467)
T KOG0201|consen 159 GQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK--SAPPR------ 230 (467)
T ss_pred eeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC--CCCCc------
Confidence 765433 3568999999999999988999999999999999999999999998887544444422 11111
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
....|. ..+.+++..|...- |..|.++.+++ +.|+....
T Consensus 231 --L~~~~S--~~~kEFV~~CL~k~----P~~RpsA~~LLKh~FIk~a~k 271 (467)
T KOG0201|consen 231 --LDGDFS--PPFKEFVEACLDKN----PEFRPSAKELLKHKFIKRAKK 271 (467)
T ss_pred --cccccC--HHHHHHHHHHhhcC----cccCcCHHHHhhhHHHHhcCC
Confidence 111222 24555666665543 77777777777 55554443
No 131
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.3e-32 Score=294.25 Aligned_cols=263 Identities=31% Similarity=0.518 Sum_probs=208.7
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~- 488 (697)
+.++|++.+.||+|+||.||+|.+..+++.||||.+... ........+|+.+++.++ |+||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~ 76 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK------HENIIGILDIIRPPS 76 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC------CCCcCchhheeeccc
Confidence 357899999999999999999999999999999998642 233456677888888875 78999999887644
Q ss_pred ----CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEE
Q 005415 489 ----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (697)
Q Consensus 489 ----~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL 564 (697)
.+.++||||+.+++...+... .+++..++.++.|++.||.|||+.||+||||||+||+++. ++.++|
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~--~~~~kl 147 (336)
T cd07849 77 FESFNDVYIVQELMETDLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--NCDLKI 147 (336)
T ss_pred ccccceEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEE
Confidence 358999999998877666421 2889999999999999999999999999999999999985 788999
Q ss_pred eeCCCcccccccc------ccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 565 IDLGSSCFQTDNL------CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 565 ~DFGla~~~~~~~------~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
+|||++....... ....+++.|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+....+..+...++
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~ 227 (336)
T cd07849 148 CDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLG 227 (336)
T ss_pred CcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 9999986543221 22467889999998765 4689999999999999999999999999888888888888888
Q ss_pred CCCHHHHhhccc--ccccc----------------cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 638 PIDLEMLMQGQE--IYKYF----------------TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 638 ~~p~e~~~~~~~--~~~~~----------------~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.++.+.+..... ...++ .-...+..++..||. ..|.+|+|+++++ +|+..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 228 TPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLT----FNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred CCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcC----CChhhCcCHHHHhcCccccccC
Confidence 877765532110 00000 112345566666665 4588999999999 9998654
No 132
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.5e-33 Score=302.97 Aligned_cols=249 Identities=23% Similarity=0.258 Sum_probs=189.9
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
.+|+++++||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.++ |+||+++++++.....+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVN------HPNVVKCHDMFDHNGEI 147 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCC------CCCcceeeeEeccCCeE
Confidence 4678889999999999999999999999999998643 233456778998888774 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.++.+... ....+..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.
T Consensus 148 ~lv~e~~~~~~L~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~~~~kL~DfG~~~ 216 (353)
T PLN00034 148 QVLLEFMDGGSLEGT---------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS--AKNVKIADFGVSR 216 (353)
T ss_pred EEEEecCCCCccccc---------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEcccccce
Confidence 999999986533211 11566778889999999999999999999999999999985 7889999999987
Q ss_pred ccccc---cccccccCCCCCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~-----~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
..... .....|+..|+|||++.. ...+.++|||||||++|||++|+.||......+....+.......+.
T Consensus 217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-- 294 (353)
T PLN00034 217 ILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPP-- 294 (353)
T ss_pred ecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCC--
Confidence 65432 234578999999998743 23456899999999999999999999754332222222111110000
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
.........+..++..||.. .+..|.++++++ +|+...
T Consensus 295 -------~~~~~~~~~l~~li~~~l~~----~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 295 -------EAPATASREFRHFISCCLQR----EPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred -------CCCCccCHHHHHHHHHHccC----ChhhCcCHHHHhcCcccccC
Confidence 00112234667777777764 488899999999 998854
No 133
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.5e-32 Score=284.06 Aligned_cols=259 Identities=29% Similarity=0.447 Sum_probs=209.5
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++|++.+.||+|++|.||+|.+..+++.||+|.++.. ......+.+|+++++.+. |+||+++++++...+.
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~ 74 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR------HENIVNLKEAFRRKGR 74 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC------CCCeeehhheEEECCE
Confidence 4799999999999999999999999999999998743 334467788999998875 7899999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
.++||||++++++..+..... .+++..+..++.||+.||.|||+.+|+|+||+|+||+++. ++.+||+|||.+
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~--~~~~kl~d~g~~ 147 (288)
T cd07833 75 LYLVFEYVERTLLELLEASPG-----GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE--SGVLKLCDFGFA 147 (288)
T ss_pred EEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEEeeecc
Confidence 999999999887766543322 2788999999999999999999999999999999999995 889999999998
Q ss_pred ccccccc----ccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 571 CFQTDNL----CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 571 ~~~~~~~----~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
....... ....++..|+|||++.+. .++.++|+||||+++|+|++|++||.+.+..+.+..+...++..+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07833 148 RALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQE 227 (288)
T ss_pred cccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhh
Confidence 7654332 235678889999999888 78999999999999999999999999988888888888888877765443
Q ss_pred hcccccc-----------------cccC--CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 646 QGQEIYK-----------------YFTK--EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 646 ~~~~~~~-----------------~~~~--~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
....... .+.. ...+..+++.||... |..|.++++++ +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~il~~~~f 288 (288)
T cd07833 228 LFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMD----PKERLTCDELLQHPYF 288 (288)
T ss_pred hcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccC----chhcccHHHHhcCCCC
Confidence 2211000 0001 344556666666544 78899998887 664
No 134
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.1e-32 Score=284.25 Aligned_cols=246 Identities=17% Similarity=0.178 Sum_probs=193.7
Q ss_pred cCceEEEEEeccCCCCceEEEEEC---CCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~---~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
..+|++.+.||+|+||.||+|.+. ..+..||+|+++... .....+.+|+.+++.+ +||||+++++++..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~ 77 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF------DHSNIVRLEGVITR 77 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC------CCCCcCeEEEEEec
Confidence 457999999999999999999764 456789999988642 2334566777777765 48999999999999
Q ss_pred cCeEEEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
....++||||++++ |.+++.... ..+++..++.++.||+.||+|||+++++||||||+|||++. ++.++|+|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~--~~~~~l~d 150 (266)
T cd05064 78 GNTMMIVTEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS--DLVCKISG 150 (266)
T ss_pred CCCcEEEEEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcC--CCcEEECC
Confidence 99999999999865 555554322 12889999999999999999999999999999999999985 78899999
Q ss_pred CCCcccccccc--c--cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 567 LGSSCFQTDNL--C--LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 567 FGla~~~~~~~--~--~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
||.+....... . ...++..|+|||.+.+..++.++|||||||++||+++ |..||.+.+..+.+..+.+....+.+
T Consensus 151 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (266)
T cd05064 151 FRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAP 230 (266)
T ss_pred CcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC
Confidence 99875532221 1 1233567999999999999999999999999999876 99999988887777766443322211
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
-..+..+..++..||... |..|++++++..
T Consensus 231 ------------~~~~~~~~~li~~c~~~~----p~~RP~~~~i~~ 260 (266)
T cd05064 231 ------------RNCPNLLHQLMLDCWQKE----RGERPRFSQIHS 260 (266)
T ss_pred ------------CCCCHHHHHHHHHHcCCC----chhCCCHHHHHH
Confidence 123457888999999765 778888887763
No 135
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.4e-32 Score=287.99 Aligned_cols=267 Identities=26% Similarity=0.353 Sum_probs=210.4
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~- 488 (697)
..+|++.+.||.|+||.||+|.+..+++.||+|.++... .......+|+.+++.++ |+||+++++++...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~ 79 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR------HPNIVELKEVVVGKH 79 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC------CCCCcceEEEEecCC
Confidence 367999999999999999999999999999999987432 12234567888888875 78999999999765
Q ss_pred -CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 -EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 -~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
+.+++||||+.++|.+++.... ..+++..+..++.||+.||.|||+.|++||||||+||+++. ++.+||+||
T Consensus 80 ~~~~~lv~e~~~~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~kL~df 152 (309)
T cd07845 80 LDSIFLVMEYCEQDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD--KGCLKIADF 152 (309)
T ss_pred CCeEEEEEecCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECcc
Confidence 5689999999998888776433 23889999999999999999999999999999999999985 788999999
Q ss_pred CCccccccc---cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 568 GSSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 568 Gla~~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
|.+...... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+...++.++..+
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07845 153 GLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESI 232 (309)
T ss_pred ceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence 998765432 222345778999999876 4578999999999999999999999999999999999999998877766
Q ss_pred Hhhcccccc---c------cc---C-CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 644 LMQGQEIYK---Y------FT---K-EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 644 ~~~~~~~~~---~------~~---~-~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
+........ + +. . .........+...+.+...|..|.|+++++ +|+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~ 296 (309)
T cd07845 233 WPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK 296 (309)
T ss_pred chhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence 543211110 0 00 0 001122334455555566688999999999 998754
No 136
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-32 Score=299.78 Aligned_cols=256 Identities=25% Similarity=0.309 Sum_probs=195.8
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
.+|++++.||+|+||.||+|.+..+++.||+|+.... ....|+.+++.++ ||||+++++++......++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVN------HPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCC------CCCCcChhheEEeCCeeEE
Confidence 4699999999999999999999999999999986543 2346888888774 8899999999999999999
Q ss_pred EEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 494 VCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 494 VmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
|||++.++|..++..... .+++..++.|+.||+.||.|||++||+||||||+|||++. .+.+||+|||++...
T Consensus 135 v~e~~~~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 135 VLPHYSSDLYTYLTKRSR-----PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND--VDQVCIGDLGAAQFP 207 (357)
T ss_pred EEEccCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEecCcccccc
Confidence 999999998888764322 2889999999999999999999999999999999999985 788999999998754
Q ss_pred cc--ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCc---------HHHHHHHHHHhhCCCCH
Q 005415 574 TD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG-EVLFPNDA---------VVMILARIIGMLGPIDL 641 (697)
Q Consensus 574 ~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG-~~PF~~~~---------~~e~l~~I~~~lg~~p~ 641 (697)
.. ......|++.|+|||++.+..++.++|||||||++|||+++ .++|.... ....+..++..++..|.
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 287 (357)
T PHA03209 208 VVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE 287 (357)
T ss_pred ccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence 32 22345689999999999999999999999999999999985 44444321 23455566666665544
Q ss_pred HHHhh--ccccccc----------c---------cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 642 EMLMQ--GQEIYKY----------F---------TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 642 e~~~~--~~~~~~~----------~---------~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
++... ......+ + ........++ .+.+...|..|+|+++++ +|+..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li----~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 288 EFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLV----HKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred hcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHH----HHHHcCCcccCcCHHHHhcCchhcc
Confidence 33210 0000000 0 0111222233 344456688999999999 99864
No 137
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-33 Score=303.30 Aligned_cols=245 Identities=24% Similarity=0.285 Sum_probs=206.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++|..++.+|+|+||.+++++++.++..+++|.+.... ........|+.++.+++ |||||.+++.|...+.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~------hP~iv~y~ds~~~~~~ 77 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL------HPNIVEYKDSFEEDGQ 77 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc------CCCeeeeccchhcCCc
Confidence 57999999999999999999999999999999997533 33456788999998875 8999999999999887
Q ss_pred -EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 491 -LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 491 -l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
++|||+|++| ++.+.+...+ ...+++..+..|+.||+.|+.|||+++|+|||||+.||+++. ++.|+|.|||
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k----~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk--~~~VkLgDfG 151 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQK----GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTK--DKKVKLGDFG 151 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccc--cCceeecchh
Confidence 9999999985 5656665444 234999999999999999999999999999999999999996 7778999999
Q ss_pred Cccccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 569 SSCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 569 la~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
+|+..... ..+.+||+.|++||++.+.+|..|+|||||||++|||++-+++|.+.+....+.+|......|.+.+..
T Consensus 152 laK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys 231 (426)
T KOG0589|consen 152 LAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYS 231 (426)
T ss_pred hhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCcccc
Confidence 99887654 355799999999999999999999999999999999999999999999999999998877544443322
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
.-++...++.+...|..|+++.+++
T Consensus 232 ----------------~el~~lv~~~l~~~P~~RPsa~~LL 256 (426)
T KOG0589|consen 232 ----------------SELRSLVKSMLRKNPEHRPSALELL 256 (426)
T ss_pred ----------------HHHHHHHHHHhhcCCccCCCHHHHh
Confidence 2223334455556677777777766
No 138
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.1e-32 Score=287.87 Aligned_cols=259 Identities=27% Similarity=0.372 Sum_probs=201.8
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
.+.|++++.||+|+||.||+|.+..+++.|++|++.... .....+.+|+.+++.++ ||||+++++.+......
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 84 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN------HPYIVKLLGAFYWDGKL 84 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCC------CCcEeeeEEEEEeCCeE
Confidence 467999999999999999999999999999999987543 33456677888887764 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.++.+..+...... .+++..+..++.|++.||.|||+.+|+||||||+||+++. ++.++|+|||.+.
T Consensus 85 ~lv~e~~~~~~l~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~ 158 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLELDR----GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL--DGDIKLADFGVSA 158 (292)
T ss_pred EEEEecCCCCcHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC--CCCEEEccCccce
Confidence 999999987654433222111 2889999999999999999999999999999999999985 7889999999886
Q ss_pred ccccc---cccccccCCCCCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~-----~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
..... .....+++.|+|||++. ...++.++|+|||||++|+|++|.+||...+....+.++.....+...
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-- 236 (292)
T cd06644 159 KNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLS-- 236 (292)
T ss_pred eccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCC--
Confidence 53322 22346788999999985 344788999999999999999999999887766555554332111000
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCCCC
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQNKI 697 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n~~ 697 (697)
..-.....+..++..||. ..|..|++.++++ +|+....+||.
T Consensus 237 --------~~~~~~~~~~~li~~~l~----~~p~~Rp~~~~il~~~~~~~~~~~~~ 280 (292)
T cd06644 237 --------QPSKWSMEFRDFLKTALD----KHPETRPSAAQLLEHPFVSSVTSNRP 280 (292)
T ss_pred --------CCcccCHHHHHHHHHHhc----CCcccCcCHHHHhcCccccccccchh
Confidence 000112356667777775 4588999999998 99998888873
No 139
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7.8e-32 Score=281.21 Aligned_cols=264 Identities=26% Similarity=0.402 Sum_probs=208.1
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
+|++.++||.|++|.||+|.+..+++.||||.++... .....+.+|+.+++.++ |+||+++++++...+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~~ 74 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK------HENIVRLHDVIHTENKLM 74 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhc------CCCEeeeeeeEeeCCcEE
Confidence 5899999999999999999999999999999987542 22356678888888874 789999999999999999
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
+||||+.++|.+++..... ...+++..+..++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|||++..
T Consensus 75 lv~e~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~--~~~~~l~d~g~~~~ 149 (284)
T cd07836 75 LVFEYMDKDLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK--RGELKLADFGLARA 149 (284)
T ss_pred EEEecCCccHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCcEEEeecchhhh
Confidence 9999999988887754332 223899999999999999999999999999999999999985 78899999999865
Q ss_pred cccc---cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 573 QTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 573 ~~~~---~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
.... .....++..|+|||.+.+. .++.++|||||||++|+|++|..||.+.+..+.+.++.+....+....+....
T Consensus 150 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 150 FGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred hcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 4332 1234567889999998664 47889999999999999999999999998888888888888877776655433
Q ss_pred cccccccCC------------chhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 649 EIYKYFTKE------------YDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 649 ~~~~~~~~~------------~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
....+...- +.......+.....+...|..|.+.++++ +|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 222211100 01112223344444445688899999988 774
No 140
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.5e-32 Score=287.39 Aligned_cols=268 Identities=26% Similarity=0.415 Sum_probs=205.0
Q ss_pred ceEEEEEeccCCCCceEEEEECC--CCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLH--TGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~--~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+|++.++||+|++|.||+|.+.. +++.||||.+.... .......+|+.+++.++ ||||+++++++...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK------HENVVSLVEVFLEH 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC------CCCccceEEEEeCC
Confidence 58999999999999999999988 89999999998632 33456678888888775 78999999999988
Q ss_pred --CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc--CcceEEE
Q 005415 489 --EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY--QRCEIKI 564 (697)
Q Consensus 489 --~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~--~~~~vKL 564 (697)
..+++||||+++++.+++....... ...+++..++.++.||+.||.|||+++|+||||||+||+++.+ .++.+||
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl 153 (316)
T cd07842 75 ADKSVYLLFDYAEHDLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKI 153 (316)
T ss_pred CCceEEEEEeCCCcCHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEE
Confidence 8899999999998888776443322 2248899999999999999999999999999999999999831 2688999
Q ss_pred eeCCCcccccccc------ccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcH---------HHH
Q 005415 565 IDLGSSCFQTDNL------CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---------VMI 628 (697)
Q Consensus 565 ~DFGla~~~~~~~------~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~---------~e~ 628 (697)
+|||++....... ....+++.|+|||++.+. .++.++|||||||++++|++|++||.+... ...
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T cd07842 154 GDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQ 233 (316)
T ss_pred CCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHH
Confidence 9999987643322 224567889999998764 578999999999999999999999976543 346
Q ss_pred HHHHHHhhCCCCHHHHhhcccccccccC-------C---c----------hhhhhHHHHHHHHHHHhhhhccCHHHHH--
Q 005415 629 LARIIGMLGPIDLEMLMQGQEIYKYFTK-------E---Y----------DLYYINEVCFANIFISLVVIRLTLEYAA-- 686 (697)
Q Consensus 629 l~~I~~~lg~~p~e~~~~~~~~~~~~~~-------~---~----------~l~~i~~~cw~~l~~~~~~~r~t~e~~~-- 686 (697)
+.++++.++.++...+........+... . . .......+...+.+...|..|.|+++++
T Consensus 234 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 234 LERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 7777888887777655432222222110 0 0 0111223344445556688999999998
Q ss_pred Hhh
Q 005415 687 LWL 689 (697)
Q Consensus 687 ~wl 689 (697)
+|+
T Consensus 314 ~~f 316 (316)
T cd07842 314 PYF 316 (316)
T ss_pred CCC
Confidence 774
No 141
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.8e-32 Score=285.62 Aligned_cols=254 Identities=22% Similarity=0.243 Sum_probs=194.9
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
.|++.+.||.|+||+||+|.+..+++.||+|++.... .......+|+.+++.++ |+||+++++.+..++.
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~ 74 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN------SQFVVNLAYAYETKDA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC------CcCceeEEEEEecCCE
Confidence 3788899999999999999999999999999987532 22234667888888775 7899999999999999
Q ss_pred EEEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.++||||+.++ |...+..... ..+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~--~~~~kl~Dfg~ 148 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD--YGHIRISDLGL 148 (285)
T ss_pred EEEEEEeccCccHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC--CCCEEEecCCc
Confidence 99999999864 5544432221 23899999999999999999999999999999999999985 67899999999
Q ss_pred ccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 570 a~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
+...... .....++..|+|||++.+..++.++|+|||||++|+|++|..||.+.........+...........
T Consensus 149 ~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~---- 224 (285)
T cd05632 149 AVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVY---- 224 (285)
T ss_pred ceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccccc----
Confidence 8654322 2335689999999999988899999999999999999999999988766554444433222221110
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccC-----HHHHH--HhhcccC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLT-----LEYAA--LWLFGID 693 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t-----~e~~~--~wl~~~~ 693 (697)
.. .....+..++..||... |..|.+ ++++. +|+....
T Consensus 225 ---~~--~~~~~~~~li~~~l~~~----P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05632 225 ---SA--KFSEEAKSICKMLLTKD----PKQRLGCQEEGAGEVKRHPFFRNMN 268 (285)
T ss_pred ---Cc--cCCHHHHHHHHHHccCC----HhHcCCCcccChHHHHcChhhhcCC
Confidence 00 11234566666666554 566666 55666 8887653
No 142
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.2e-32 Score=292.59 Aligned_cols=268 Identities=27% Similarity=0.359 Sum_probs=210.1
Q ss_pred ecCceEE-EEEeccCCCCceEEEEECCCCcEEEEEEEecchhhh---------------HhHHHHHHHHHHhcccCCCCC
Q 005415 412 IAGRYYV-TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF---------------DQSLDEIKLLKLVNKNDPADE 475 (697)
Q Consensus 412 i~~rY~i-~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~---------------~~~~~Ei~iL~~L~~~~~~~h 475 (697)
+.+||.. .+.||.|+||+||+|.+..+++.||||+++...... ..+.+|+.+++.++ |
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h 79 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK------H 79 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC------C
Confidence 4678875 477999999999999999999999999987532211 13567888888774 7
Q ss_pred CceeEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccc
Q 005415 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (697)
Q Consensus 476 pnIv~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~ 555 (697)
+||+++++++......++||||+.++|.+.+.... .+++..+..++.|++.||.|||+.||+|+||+|+||+++
T Consensus 80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~ 153 (335)
T PTZ00024 80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN 153 (335)
T ss_pred cceeeeeEEEecCCcEEEEEeccccCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC
Confidence 89999999999999999999999998888875432 288999999999999999999999999999999999998
Q ss_pred ccCcceEEEeeCCCcccccc-----------------ccccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCC
Q 005415 556 SYQRCEIKIIDLGSSCFQTD-----------------NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGE 617 (697)
Q Consensus 556 ~~~~~~vKL~DFGla~~~~~-----------------~~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~ 617 (697)
. ++.++|+|||.+..... ......++..|+|||.+.+. .++.++|+|||||++|+|++|.
T Consensus 154 ~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 154 S--KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred C--CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 5 78899999998865441 11123457789999998764 4689999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccC-----------CchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 618 VLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTK-----------EYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 618 ~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~-----------~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
+||.+.+..+.+..+.+.++.++...+........+... ......-+.+...+.+...|..|.++++++
T Consensus 232 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 311 (335)
T PTZ00024 232 PLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEAL 311 (335)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHh
Confidence 999999999999999998888877655443322211100 011112234455555556699999999999
Q ss_pred --HhhcccC
Q 005415 687 --LWLFGID 693 (697)
Q Consensus 687 --~wl~~~~ 693 (697)
+|+...+
T Consensus 312 ~~~~~~~~~ 320 (335)
T PTZ00024 312 KHEYFKSDP 320 (335)
T ss_pred cCcccCCCC
Confidence 9987553
No 143
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.1e-32 Score=285.83 Aligned_cols=259 Identities=25% Similarity=0.388 Sum_probs=203.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC-
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE- 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~- 489 (697)
++|++.++||+|+||.||+|.+..+++.||||.+.... .......+|+.+++.++ ||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~ 85 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK------HENVVNLIEICRTKAT 85 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC------CCCccceEEEEecccc
Confidence 57999999999999999999999999999999986432 22234567888888775 789999999987543
Q ss_pred -------eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 490 -------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 490 -------~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
..++||||+++++...+.... ..+++..++.++.||+.||.|||++|++|+||||+||+++. ++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~ 158 (310)
T cd07865 86 PYNRYKGSFYLVFEFCEHDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITK--DGIL 158 (310)
T ss_pred cccCCCceEEEEEcCCCcCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC--CCcE
Confidence 459999999988877765332 12889999999999999999999999999999999999985 7899
Q ss_pred EEeeCCCcccccccc-------ccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Q 005415 563 KIIDLGSSCFQTDNL-------CLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 634 (697)
Q Consensus 563 KL~DFGla~~~~~~~-------~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~ 634 (697)
||+|||++....... ....++..|+|||.+.+.. ++.++||||||+++|+|++|.+||.+.+....+..+.+
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~ 238 (310)
T cd07865 159 KLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQ 238 (310)
T ss_pred EECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 999999986543221 2245678899999987654 78899999999999999999999999988888888888
Q ss_pred hhCCCCHHHHhhcccccc-------------------cccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 635 MLGPIDLEMLMQGQEIYK-------------------YFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 635 ~lg~~p~e~~~~~~~~~~-------------------~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
..+.++.+++........ .+.....+..++..||. ..|..|.++++++ +|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~----~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 239 LCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLV----LDPAKRIDADTALNHDFF 310 (310)
T ss_pred HhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhc----CChhhccCHHHHhcCCCC
Confidence 888888776554321110 00011233345555553 4588899999998 774
No 144
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3e-32 Score=284.70 Aligned_cols=259 Identities=30% Similarity=0.433 Sum_probs=204.8
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
.|++++.||.|++|.||+|.+..+++.||||.+.... .....+..|+.+++.++ ||||+++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN------HPNIVKLLDVIHTENKL 74 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcC------CCCCcchhhhcccCCcE
Confidence 4889999999999999999999999999999987432 22346778888888874 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.++|..++..... ..+++..+..++.|++.||+|||+.+++|+||+|+||+++. ++.+||+|||++.
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~--~~~~~l~dfg~~~ 148 (284)
T cd07860 75 YLVFEFLHQDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLAR 148 (284)
T ss_pred EEEeeccccCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEeeccchh
Confidence 99999998888777754322 22889999999999999999999999999999999999995 7889999999986
Q ss_pred ccccc---cccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
..... .....+++.|+|||++.+.. ++.++|||||||++|+|+||+.||.+.+..+.+.++.+.++.++...+...
T Consensus 149 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07860 149 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 228 (284)
T ss_pred hcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 54332 22234678899999887654 688999999999999999999999999988888888888887776554322
Q ss_pred cccccc---c-------------cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 648 QEIYKY---F-------------TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 648 ~~~~~~---~-------------~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.....+ + .-...++.++..||. ..|..|+|+++++ +|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLH----YDPNKRISAKAALAHPFF 284 (284)
T ss_pred hHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcC----CCcccCCCHHHHhcCCCC
Confidence 111100 0 011233334444444 4688999999998 774
No 145
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.2e-32 Score=280.40 Aligned_cols=257 Identities=30% Similarity=0.425 Sum_probs=201.5
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--CeE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--EHL 491 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--~~l 491 (697)
|++++.||+|+||.||+|.+..+++.||+|+++.... .......|+.++..+. +|+||+++++++... +.+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~~~ 75 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS-----PHPNILRLIEVLFDRKTGRL 75 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC-----CCCCccceEEEEecCCCCcE
Confidence 6889999999999999999999999999999875321 1123345666666653 488999999999987 889
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++||||+.+++++.+.... ..+++..++.++.|++.||.|||+.+|+||||+|+||+++. +.+||+|||++.
T Consensus 76 ~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~ 147 (282)
T cd07831 76 ALVFELMDMNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCR 147 (282)
T ss_pred EEEEecCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC---CCeEEEeccccc
Confidence 9999999999888776432 12889999999999999999999999999999999999994 899999999987
Q ss_pred ccccc--cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 572 FQTDN--LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 572 ~~~~~--~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
..... .....++..|+|||.+.. ..++.++|||||||++|+|++|.+||.+.+..+.+..+.+.++.++.++.....
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred ccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc
Confidence 65332 223457889999998754 457889999999999999999999999999999999999989988876643221
Q ss_pred ccc-cccc---------------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 649 EIY-KYFT---------------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 649 ~~~-~~~~---------------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
... ..+. ....+..++..||. ..|.+|.++++++ +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLA----YDPDERITAKQALRHPYF 282 (282)
T ss_pred ccccccccCcccccccHHHHcccccHHHHHHHHHHhc----cCcccccCHHHHhhCCCC
Confidence 110 0000 01233444444444 4488899999998 775
No 146
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.9e-32 Score=276.65 Aligned_cols=247 Identities=24% Similarity=0.320 Sum_probs=200.5
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
.|.+.+.||+|++|.||+|.+..+++.|++|.+... ......+.+|+.+++.++ ||||+++++++......
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD------SSYIIRYYESFLDKGKL 74 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcC------CCCeehheeeeccCCEE
Confidence 488999999999999999999999999999998743 334456677888777764 88999999999999999
Q ss_pred EEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+. ++|.+++..... ..++...+..++.|++.||.|||++||+|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~--~~~~~l~df~~~ 148 (256)
T cd08529 75 NIVMEYAENGDLHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDA--YDNVKIGDLGVA 148 (256)
T ss_pred EEEEEeCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeC--CCCEEEcccccc
Confidence 99999996 577777654321 23888999999999999999999999999999999999995 788999999988
Q ss_pred ccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
....... ....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+..+....+.....++...
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----- 223 (256)
T cd08529 149 KLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQ----- 223 (256)
T ss_pred eeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc-----
Confidence 7654332 23467889999999999889999999999999999999999999888777666664432221111
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.....+..+++.||... |..|.+++++. +||
T Consensus 224 -------~~~~~~~~~i~~~l~~~----p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 224 -------MYSQQLAQLIDQCLTKD----YRQRPDTFQLLRNPSL 256 (256)
T ss_pred -------ccCHHHHHHHHHHccCC----cccCcCHHHHhhCCCC
Confidence 12346778888888654 88899998887 775
No 147
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=306.25 Aligned_cols=231 Identities=27% Similarity=0.361 Sum_probs=187.0
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcc
Q 005415 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 498 (697)
Q Consensus 419 ~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEyl 498 (697)
++-||+|+.|.||+|+. .++.||||.++.-+ ..+|+-|++|+ ||||+.+.++|.....++||||||
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~elk------ETdIKHLRkLk------H~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVRELK------ETDIKHLRKLK------HPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhhhh------hhhHHHHHhcc------CcceeeEeeeecCCceeEEeeecc
Confidence 56699999999999974 57899999886332 24577677664 889999999999999999999999
Q ss_pred c-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccccc
Q 005415 499 R-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL 577 (697)
Q Consensus 499 ~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~ 577 (697)
. |-|++.++..+. ++...+..|.++|+.||.|||.+.|||||||.-||||.. +..|||+|||.++...+..
T Consensus 195 a~GqL~~VLka~~~------itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~--~d~VKIsDFGTS~e~~~~S 266 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRP------ITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY--DDVVKISDFGTSKELSDKS 266 (904)
T ss_pred ccccHHHHHhccCc------cCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec--cceEEeccccchHhhhhhh
Confidence 8 678888875543 788889999999999999999999999999999999996 6789999999998766543
Q ss_pred --ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccccccc
Q 005415 578 --CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFT 655 (697)
Q Consensus 578 --~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~ 655 (697)
-.+.||..|||||+|...+.+.|+|||||||+|||||||+.||.+.+...++.-+ |.-...+ .-.=.
T Consensus 267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV----GsNsL~L-------pvPst 335 (904)
T KOG4721|consen 267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV----GSNSLHL-------PVPST 335 (904)
T ss_pred hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEec----cCCcccc-------cCccc
Confidence 3478999999999999999999999999999999999999999876655444332 2221111 11124
Q ss_pred CCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 656 KEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 656 ~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
++..+.-++++||.+. +.+|.+-.+++
T Consensus 336 cP~GfklL~Kqcw~sK----pRNRPSFrqil 362 (904)
T KOG4721|consen 336 CPDGFKLLLKQCWNSK----PRNRPSFRQIL 362 (904)
T ss_pred CchHHHHHHHHHHhcC----CCCCccHHHHH
Confidence 5667888999999987 55555555555
No 148
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.5e-32 Score=320.38 Aligned_cols=260 Identities=25% Similarity=0.311 Sum_probs=200.0
Q ss_pred CceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 409 ~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
++...++|++++.||.|+||+||+|.+..++..||+|++... ......+..|+.+++.|+ ||||++++++|
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~------HPNIVrl~d~f 81 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK------HKNIVRYIDRF 81 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC------CCCcCeEEEEE
Confidence 556678999999999999999999999999999999998743 334466788999999885 78999999998
Q ss_pred Eec--CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhc-------CccccCCCCcccccc
Q 005415 486 YHL--EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-------GIIHCDLKPENILIK 555 (697)
Q Consensus 486 ~~~--~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~-------gIvHrDLKP~NILl~ 555 (697)
... ..+||||||+. ++|..++...... ...+++..++.|+.||+.||.|||+. +||||||||+||||.
T Consensus 82 ~de~~~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~ 159 (1021)
T PTZ00266 82 LNKANQKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLS 159 (1021)
T ss_pred EecCCCEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEee
Confidence 654 56999999998 5777776543221 12389999999999999999999984 499999999999996
Q ss_pred cc---------------CcceEEEeeCCCccccccc--cccccccCCCCCchhhcC--CCCCchhhHHHHHHHHHHHHhC
Q 005415 556 SY---------------QRCEIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTG 616 (697)
Q Consensus 556 ~~---------------~~~~vKL~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~--~~~s~ksDIWSLGviL~ELltG 616 (697)
.. ....+||+|||++...... .....||+.|+|||++.+ ..++.++||||||||||+|++|
T Consensus 160 s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTG 239 (1021)
T PTZ00266 160 TGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSG 239 (1021)
T ss_pred cCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHC
Confidence 41 2345899999998765432 233578999999999965 3588999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 617 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 617 ~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
..||...+....+..++.....++. ......+..++..||. ..|..|+++.+++ +|+...
T Consensus 240 k~PF~~~~~~~qli~~lk~~p~lpi------------~~~S~eL~dLI~~~L~----~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 240 KTPFHKANNFSQLISELKRGPDLPI------------KGKSKELNILIKNLLN----LSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CCCCCcCCcHHHHHHHHhcCCCCCc------------CCCCHHHHHHHHHHhc----CChhHCcCHHHHhccHHHhhc
Confidence 9999876554444433322211111 1123456666666664 4588899999998 888644
No 149
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-32 Score=305.67 Aligned_cols=261 Identities=23% Similarity=0.267 Sum_probs=196.1
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
...+|.+.+.||+|+||.||+|.+..+++.||||.... ....+|+.+++.++ |+||+++++++......
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~------HpnIv~l~~~~~~~~~~ 235 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLS------HPAVLALLDVRVVGGLT 235 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCC------CCCCCcEEEEEEECCEE
Confidence 35689999999999999999999999999999996432 34568999999875 78999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++|||++.++|..++..... .+++..++.|+.||+.||.|||++||+||||||+|||++. .+.+||+|||+++
T Consensus 236 ~lv~e~~~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~--~~~vkL~DFGla~ 308 (461)
T PHA03211 236 CLVLPKYRSDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG--PEDICLGDFGAAC 308 (461)
T ss_pred EEEEEccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC--CCCEEEcccCCce
Confidence 99999999998887754322 3899999999999999999999999999999999999985 7889999999987
Q ss_pred ccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-------HHHHHHHHHHhhCCC
Q 005415 572 FQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA-------VVMILARIIGMLGPI 639 (697)
Q Consensus 572 ~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~-------~~e~l~~I~~~lg~~ 639 (697)
..... .....||+.|+|||++.+..++.++|||||||+||||++|..|+-... ....+.+++...+..
T Consensus 309 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~ 388 (461)
T PHA03211 309 FARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH 388 (461)
T ss_pred ecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccc
Confidence 54322 123468999999999999999999999999999999999876553221 134455555443322
Q ss_pred CHHH--------Hhhc-----cc-----ccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 640 DLEM--------LMQG-----QE-----IYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 640 p~e~--------~~~~-----~~-----~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
..++ .... .. ....|.....+.....+.....+...+..|.|+++++ +|+.
T Consensus 389 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~ 459 (461)
T PHA03211 389 VDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ 459 (461)
T ss_pred cccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence 1111 0000 00 0001111111222333444444566688999999999 9985
No 150
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.8e-32 Score=287.72 Aligned_cols=255 Identities=23% Similarity=0.286 Sum_probs=200.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.+|++.+.||+|++|.||+|.+..+++.||||.+.... .....+..|+++++.+. |+||+++++.+....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~ 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD------HPFLPTLYASFQTET 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC------CCCchhheeeeecCC
Confidence 37999999999999999999999899999999997543 23345677888887774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..++||||+.+ +|.+++..... ..+++..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg 148 (316)
T cd05574 75 YLCLVMDYCPGGELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE--SGHIMLSDFD 148 (316)
T ss_pred EEEEEEEecCCCCHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC--CCCEEEeecc
Confidence 99999999975 67776653221 23888999999999999999999999999999999999995 7889999999
Q ss_pred Cccccccc--------------------------------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhC
Q 005415 569 SSCFQTDN--------------------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTG 616 (697)
Q Consensus 569 la~~~~~~--------------------------------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG 616 (697)
++...... .....|+..|+|||++.+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 87543211 1123578889999999998899999999999999999999
Q ss_pred CCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccC----HHHHH--Hhhc
Q 005415 617 EVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLT----LEYAA--LWLF 690 (697)
Q Consensus 617 ~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t----~e~~~--~wl~ 690 (697)
..||.+.+....+..+...-...+. ...-...+..++..||... +..|.+ +++++ +|+.
T Consensus 229 ~~pf~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~li~~~l~~~----p~~R~s~~~~~~~ll~~~~~~ 293 (316)
T cd05574 229 TTPFKGSNRDETFSNILKKEVTFPG-----------SPPVSSSARDLIRKLLVKD----PSKRLGSKRGAAEIKQHPFFR 293 (316)
T ss_pred CCCCCCCchHHHHHHHhcCCccCCC-----------ccccCHHHHHHHHHHccCC----HhHCCCchhhHHHHHcCchhh
Confidence 9999988877766665432111111 1112345666666666644 666777 99998 8998
Q ss_pred ccCCC
Q 005415 691 GIDQN 695 (697)
Q Consensus 691 ~~~~n 695 (697)
+.++-
T Consensus 294 ~~~~~ 298 (316)
T cd05574 294 GVNWA 298 (316)
T ss_pred cCChh
Confidence 77654
No 151
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-32 Score=285.85 Aligned_cols=242 Identities=19% Similarity=0.251 Sum_probs=195.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe----cCeE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----LEHL 491 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~----~~~l 491 (697)
..||+|+++.||+|.. +|+.||||.++.... ..+.+.+|+.+++.++ ||||+++++++.+ ...+
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv~~~g~~~~~~~~~~~~ 97 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID------SNNILKIYGFIIDIVDDLPRL 97 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC------CCCEEEEeeeEEecccCCCce
Confidence 4689999999999986 789999999975432 2356678999998875 7899999999977 3578
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEeeCCC
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
++||||+.+ +|.+++.... .+++.....++.|++.||.|||+ .+++||||||+|||++. ++.+||+|||+
T Consensus 98 ~lv~Ey~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~--~~~~kl~dfg~ 169 (283)
T PHA02988 98 SLILEYCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE--NYKLKIICHGL 169 (283)
T ss_pred EEEEEeCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC--CCcEEEcccch
Confidence 999999985 5766665332 27888999999999999999998 49999999999999995 78999999999
Q ss_pred ccccccccccccccCCCCCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 570 SCFQTDNLCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 570 a~~~~~~~~~~~gt~~Y~APE~l~~--~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
+...........++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+.+..++.....++..
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~----- 244 (283)
T PHA02988 170 EKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP----- 244 (283)
T ss_pred HhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC-----
Confidence 8766555555678899999999976 678999999999999999999999999888777777665433332211
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhccc
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFGI 692 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~~ 692 (697)
......+..++..||... |..|+|+++++.-|.+.
T Consensus 245 ------~~~~~~l~~li~~cl~~d----p~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 245 ------LDCPLEIKCIVEACTSHD----SIKRPNIKEILYNLSLY 279 (283)
T ss_pred ------CcCcHHHHHHHHHHhcCC----cccCcCHHHHHHHHHHH
Confidence 123457888899998866 78889999888655544
No 152
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=6e-32 Score=291.32 Aligned_cols=262 Identities=29% Similarity=0.451 Sum_probs=206.8
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+..+|++.+.||.|+||+||+|.+..+++.||||.+... ........+|+.+++.++ |+||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~ni~~~~~~~~~~ 76 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD------HENVIAIKDIMPPP 76 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC------CCCccchHHheecc
Confidence 356899999999999999999999999999999998742 223345667888888774 78999999988754
Q ss_pred -----CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 489 -----~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
...++||||+.++|.+.+.... .+++..+..++.|++.||.|||+++++|+||||+||+++. ++.+|
T Consensus 77 ~~~~~~~~~lv~e~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~--~~~~k 148 (337)
T cd07858 77 HREAFNDVYIVYELMDTDLHQIIRSSQ------TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA--NCDLK 148 (337)
T ss_pred cccccCcEEEEEeCCCCCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEE
Confidence 3589999999988887775432 2889999999999999999999999999999999999985 78899
Q ss_pred EeeCCCccccccc---cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 564 IIDLGSSCFQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 564 L~DFGla~~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+....+..+.+..+.+
T Consensus 149 L~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 228 (337)
T cd07858 149 ICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSP 228 (337)
T ss_pred ECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999998765432 223467888999999875 458899999999999999999999999998888888888888887
Q ss_pred CHHHHhhcc--cccc----------------cccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 640 DLEMLMQGQ--EIYK----------------YFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 640 p~e~~~~~~--~~~~----------------~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
+.+.+.... ...+ +......+..+++.||. ..|..|.++++++ +|+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 229 SEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLV----FDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred ChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhc----CChhhccCHHHHHcCcchhh
Confidence 776542100 0000 01112233344444444 4588899999999 99874
No 153
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.7e-32 Score=292.05 Aligned_cols=261 Identities=34% Similarity=0.480 Sum_probs=212.2
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC--
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-- 489 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~-- 489 (697)
+|++.+.||.|++|.||+|.+..+++.||||.+... ......+.+|+.+++.++ |+||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR------HENIIGLLDILRPPSPE 74 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcC------CcchhhhhhhhcccCcc
Confidence 689999999999999999999889999999998753 233456778888888775 789999999998775
Q ss_pred ---eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 490 ---HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 490 ---~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
.+|+||||++++|...+.... .+++..++.++.||+.||.|||+.||+||||||.|||++. ++.++|+|
T Consensus 75 ~~~~~~lv~e~~~~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~--~~~~~L~d 146 (330)
T cd07834 75 DFNDVYIVTELMETDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS--NCDLKICD 146 (330)
T ss_pred cccceEEEecchhhhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEcc
Confidence 799999999988777765332 3889999999999999999999999999999999999995 68999999
Q ss_pred CCCccccccc------cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 567 LGSSCFQTDN------LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 567 FGla~~~~~~------~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
||.+...... .....++..|+|||.+.+. .++.++|+||||+++|+|++|.+||.+.+..+.+..++..++.+
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 226 (330)
T cd07834 147 FGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTP 226 (330)
T ss_pred cCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCC
Confidence 9998765433 2234678889999999888 78999999999999999999999999999999999999999988
Q ss_pred CHHHHhhc--cccccccc----------------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 640 DLEMLMQG--QEIYKYFT----------------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 640 p~e~~~~~--~~~~~~~~----------------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
+.+.+... .....+.. -...+..++..||. ..|..|.+.++++ +|+..+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 227 SEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLV----FDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred ChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHcc----CChhhCCCHHHHHhCccHHhhc
Confidence 87765411 11111111 12334445555554 4588899999999 8997543
No 154
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-33 Score=283.79 Aligned_cols=255 Identities=25% Similarity=0.327 Sum_probs=202.4
Q ss_pred cCceEEE-EEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 005415 413 AGRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (697)
Q Consensus 413 ~~rY~i~-e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (697)
.++|+|. ++||-|-.|.|..+.++.+++++|+|++.-. ....+|+++.-..+ .|||||.++++|...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s-----~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMAS-----GHPHIVSIIDVYENSYQG 130 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhc-----CCCceEEeehhhhhhccC
Confidence 4567765 5799999999999999999999999998754 34556777665544 589999999998743
Q ss_pred -CeEEEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc-CcceEEEe
Q 005415 489 -EHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY-QRCEIKII 565 (697)
Q Consensus 489 -~~l~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~-~~~~vKL~ 565 (697)
..+.+|||.|+|+ |...+... ++..+++.++..|++||..|+.|||+.+|.||||||+|+|.... .+..+||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~----g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDR----GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHc----ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEec
Confidence 5689999999864 55555533 34459999999999999999999999999999999999999742 45689999
Q ss_pred eCCCcccccc--ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHhhCCC
Q 005415 566 DLGSSCFQTD--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV----VMILARIIGMLGPI 639 (697)
Q Consensus 566 DFGla~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~----~e~l~~I~~~lg~~ 639 (697)
|||+|+.... ...+.+-||+|.|||++....|+..+|+||+||++|-|++|.+||....- ...-.+|....-.+
T Consensus 207 DfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~F 286 (400)
T KOG0604|consen 207 DFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEF 286 (400)
T ss_pred ccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccC
Confidence 9999987763 35567889999999999988999999999999999999999999976542 12333333322233
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
|.+.|. ...+-..+....++...|.+|+|+++.+ +|+++.+
T Consensus 287 P~pEWs-------------~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 287 PEPEWS-------------CVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred CChhHh-------------HHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 322221 2334557788899999999999999999 9999865
No 155
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=9.2e-32 Score=277.51 Aligned_cols=250 Identities=24% Similarity=0.334 Sum_probs=200.7
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
-.++|+++++||+|++|.||+|.+ .++..||+|.+.........+.+|+.+++.++ |+||+++++.+......
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ------HDKLVRLYAVVTKEEPI 76 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHHHHHHHHHHHHhCC------CCCeeeEEEEEcCCCCc
Confidence 346899999999999999999986 45678999998765555567888999988874 78999999999999999
Q ss_pred EEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+. ++|.+++..... ..+++..+..++.|++.||.|||+.+++||||||+||+++. ++.++|+|||++
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~ 150 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEG----GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE--SLMCKIADFGLA 150 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecC--CCcEEECCCccc
Confidence 99999996 577777654322 22788899999999999999999999999999999999985 788999999999
Q ss_pred ccccccc----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 571 CFQTDNL----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 571 ~~~~~~~----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+......+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 226 (261)
T cd05072 151 RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRM---- 226 (261)
T ss_pred eecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC----
Confidence 7654322 12234567999999988889999999999999999998 99999988777766666443221110
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
......+..++..||... |..|++++++..+|.
T Consensus 227 --------~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 227 --------ENCPDELYDIMKTCWKEK----AEERPTFDYLQSVLD 259 (261)
T ss_pred --------CCCCHHHHHHHHHHccCC----cccCcCHHHHHHHHh
Confidence 112345677777787544 889999999987775
No 156
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.4e-31 Score=287.94 Aligned_cols=261 Identities=32% Similarity=0.492 Sum_probs=210.5
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH- 487 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~- 487 (697)
+.++|++++.||.|+||.||+|.+..+++.||||++... ......+..|+.+++.++ ||||++++++|..
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~ 81 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR------HENIISLSDIFISP 81 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC------CCCeeeEeeeEecC
Confidence 467899999999999999999999999999999987642 223356678888888774 7899999999876
Q ss_pred cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 488 ~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
....++||||++++|..++... .++...+..++.||+.||.|||+++|+||||+|+||+++. ++.++|+||
T Consensus 82 ~~~~~lv~e~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~--~~~~~l~df 152 (328)
T cd07856 82 LEDIYFVTELLGTDLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE--NCDLKICDF 152 (328)
T ss_pred CCcEEEEeehhccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC--CCCEEeCcc
Confidence 4678999999988877666421 2778888899999999999999999999999999999985 788999999
Q ss_pred CCccccccccccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 568 GSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 568 Gla~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
|.+...........++..|+|||.+.+ ..++.++|||||||++|+|++|++||...........+.+.++.++.++...
T Consensus 153 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 153 GLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 998766555455667889999999866 5689999999999999999999999999988888888889999888776543
Q ss_pred cccc--ccc----------------ccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 647 GQEI--YKY----------------FTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 647 ~~~~--~~~----------------~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
.... .++ -.....+..+++.||. ..|..|.++++++ +|+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~~P~~R~t~~ell~~~~~~~ 293 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLV----FDPQKRISAAEALAHPYLAP 293 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcC----CChhhCCCHHHHhcCCcccc
Confidence 2110 000 0112345566666654 4588899999999 88853
No 157
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9.9e-32 Score=281.16 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=194.4
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
+|++++.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.++ ||||+++++++...+..+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~ 75 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCD------SPYIIGFYGAFFVENRIS 75 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCC------CCCeeeEEEEEEECCEEE
Confidence 688999999999999999999999999999998754 233356777888887764 789999999999999999
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
+||||++++.+.... .+++..+..++.|++.||.|||+.||+|+||||+|||++. ++.++|+|||++..
T Consensus 76 lv~e~~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~--~~~~~l~dfg~~~~ 144 (279)
T cd06619 76 ICTEFMDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT--RGQVKLCDFGVSTQ 144 (279)
T ss_pred EEEecCCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC--CCCEEEeeCCccee
Confidence 999999976554321 1678889999999999999999999999999999999985 78999999999875
Q ss_pred cccc-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH---HHHHHHHhhCCCCHHHHhhcc
Q 005415 573 QTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVM---ILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 573 ~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e---~l~~I~~~lg~~p~e~~~~~~ 648 (697)
.... .....++..|+|||++.+..++.++|+|||||++|+|++|..||......+ ....+...........
T Consensus 145 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----- 219 (279)
T cd06619 145 LVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV----- 219 (279)
T ss_pred cccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC-----
Confidence 4433 334578899999999999899999999999999999999999996532111 0011111111000000
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCC
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQN 695 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n 695 (697)
. ........+..++..||. ..|..|++++++. +|+...+.+
T Consensus 220 -~-~~~~~~~~~~~li~~~l~----~~P~~Rp~~~eil~~~~~~~~~~~ 262 (279)
T cd06619 220 -L-PVGQFSEKFVHFITQCMR----KQPKERPAPENLMDHPFIVQYNDG 262 (279)
T ss_pred -C-CCCcCCHHHHHHHHHHhh----CChhhCCCHHHHhcCcccccccCc
Confidence 0 000122356667777666 4488999999988 999876654
No 158
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=8.2e-32 Score=280.44 Aligned_cols=257 Identities=28% Similarity=0.452 Sum_probs=205.2
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--Ce
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--EH 490 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--~~ 490 (697)
|++.+.||.|++|.||+|.+..+++.+|+|++... ......+.+|+.+++.+. |+|++++++++... ..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR------HPNIVRLKEIVTSKGKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhcc------CCCeeeheeeEecCCCCc
Confidence 68899999999999999999999999999999865 233456778888888875 78999999999988 88
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
.++||||++++|.+++.... ..+++..++.++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~--~~~~~l~d~g~~ 147 (287)
T cd07840 75 IYMVFEYMDHDLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN--DGVLKLADFGLA 147 (287)
T ss_pred EEEEeccccccHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC--CCCEEEccccce
Confidence 99999999988887775432 23889999999999999999999999999999999999995 889999999998
Q ss_pred cccccc----cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 571 CFQTDN----LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 571 ~~~~~~----~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
...... .....++..|+|||.+.+. .++.++||||||+++|+|++|+.||...+....+..+.+..+.++...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07840 148 RPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP 227 (287)
T ss_pred eeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence 765443 2234567889999987654 57899999999999999999999999998888888888888877665544
Q ss_pred hcccc----------------cccccC--CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 646 QGQEI----------------YKYFTK--EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 646 ~~~~~----------------~~~~~~--~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
..... ...+.. ...+..+++.||. ..|..|+++++++ +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~----~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLT----LDPKKRISADQALQHEYF 287 (287)
T ss_pred ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcC----CChhhCcCHHHHhhCcCC
Confidence 32211 001111 2334444455543 4488899999988 775
No 159
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.3e-31 Score=281.78 Aligned_cols=259 Identities=27% Similarity=0.389 Sum_probs=206.5
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-- 488 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~-- 488 (697)
+.|++.+.||.|+||.||+|.+..+++.+|+|.++... .......+|+.+++.++ ||||+++++++...
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~~~ 78 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ------HPNIVTVKEVVVGSNL 78 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC------CCCEEEEEEEEEecCC
Confidence 47999999999999999999999999999999997532 22234567888888774 78999999999877
Q ss_pred CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 489 ~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
...++||||+.++|.+++..... .+++..++.++.||+.||.|||+++|+|+||||+||+++. ++.++|+|||
T Consensus 79 ~~~~lv~e~~~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~--~~~~~l~d~g 151 (293)
T cd07843 79 DKIYMVMEYVEHDLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN--RGILKICDFG 151 (293)
T ss_pred CcEEEEehhcCcCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC--CCcEEEeecC
Confidence 88999999999888887764332 3899999999999999999999999999999999999995 7889999999
Q ss_pred Cccccccc---cccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 569 SSCFQTDN---LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 569 la~~~~~~---~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
++...... .....+++.|+|||.+.+.. ++.++|+||||+++|+|++|.+||...+..+.+.++...++.+....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (293)
T cd07843 152 LAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIW 231 (293)
T ss_pred ceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHH
Confidence 98765443 22345678899999987654 688999999999999999999999999999999999888887777655
Q ss_pred hhccccccc----------------cc---CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 645 MQGQEIYKY----------------FT---KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 645 ~~~~~~~~~----------------~~---~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
......... +. -...+..++..|| ...|..|+++++++ +|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l----~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 232 PGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLL----TYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHh----ccCccccCCHHHHhcCCCC
Confidence 432111110 11 0223334444444 45588999999998 774
No 160
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.1e-31 Score=280.20 Aligned_cols=258 Identities=28% Similarity=0.421 Sum_probs=206.6
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
|++.+.||.|++|.||+|.++.+|..||+|++.... .....+.+|+.+++.++ ||||+++++++......+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~------~~~iv~~~~~~~~~~~~~ 74 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELN------HPNIVRLLDVVHSENKLY 74 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcC------CCCccCHhheeccCCeEE
Confidence 678899999999999999999999999999987542 22345678888888875 789999999999999999
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
+||||++++|.+++..... ..+++..+..++.|++.||.|||+++++|+||+|+||+++. ++.++|+|||.+..
T Consensus 75 iv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~--~~~~~l~df~~~~~ 148 (283)
T cd07835 75 LVFEFLDLDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR--EGALKLADFGLARA 148 (283)
T ss_pred EEEeccCcCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC--CCcEEEeecccccc
Confidence 9999999888887764432 23889999999999999999999999999999999999996 78899999999875
Q ss_pred ccccc---ccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 573 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 573 ~~~~~---~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
..... ....++..|+|||++.+. .++.++||||||+++|+|++|++||...+....+.++.+..+.+....+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07835 149 FGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVT 228 (283)
T ss_pred cCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhh
Confidence 43221 223557889999988764 47889999999999999999999999998888888888888877776654322
Q ss_pred cccccc----------------cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 649 EIYKYF----------------TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 649 ~~~~~~----------------~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
....+. .-...+..++..||.. .|..|.|+++++ +|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~----~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 229 SLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVY----DPAKRISAKAALQHPYF 283 (283)
T ss_pred hchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcC----ChhhCcCHHHHhcCCCC
Confidence 221110 0112344555555554 488899999998 774
No 161
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-31 Score=276.61 Aligned_cols=247 Identities=27% Similarity=0.320 Sum_probs=194.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~------~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
+.|++.+.||.|++|.||+|.+..+++.||+|.+..... ....+.+|+.+++.++ ||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ------HERIVQYYGCLRD 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC------CCCeeeeEEEEcc
Confidence 468999999999999999999999999999999874321 2245667777777664 8899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
...+++||||+.+ +|.+.+.... .++...+..++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|
T Consensus 76 ~~~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~--~~~~~l~d 147 (263)
T cd06625 76 DETLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDS--AGNVKLGD 147 (263)
T ss_pred CCeEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEee
Confidence 9999999999974 6666665332 2788899999999999999999999999999999999985 78899999
Q ss_pred CCCcccccccc------ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 567 LGSSCFQTDNL------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 567 FGla~~~~~~~------~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
||++....... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.......+......+.
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 227 (263)
T cd06625 148 FGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ 227 (263)
T ss_pred cccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCC
Confidence 99986543211 234567889999999998899999999999999999999999987766555544432211111
Q ss_pred HHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 641 LEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 641 ~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
. . -.....+..++..||... |..|.|+++++ +|+
T Consensus 228 ~---------~--~~~~~~~~~li~~~l~~~----p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 228 L---------P--SHVSPDARNFLRRTFVEN----AKKRPSAEELLRHFFV 263 (263)
T ss_pred C---------C--ccCCHHHHHHHHHHhhcC----cccCCCHHHHhhCCCC
Confidence 0 0 012345667777777655 78888999888 664
No 162
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=6.8e-32 Score=279.88 Aligned_cols=251 Identities=25% Similarity=0.363 Sum_probs=195.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec----
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---- 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~---- 488 (697)
.++|++.+.||.|+||.||+|.+..+++.||+|++.........+..|+.+++.+. +|+||+++++++...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-----HHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc-----CCCCeeeEeeEEeecCCCC
Confidence 46799999999999999999999999999999999866555567788888888764 378999999999753
Q ss_pred --CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 489 --EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 489 --~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
...++||||+.+ +|.+++..... ..+++..+..++.|++.||.|||+++|+|+||+|+||+++. ++.++|+
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~--~~~~~l~ 153 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLV 153 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC--CCCEEEc
Confidence 468999999985 67666654221 23788999999999999999999999999999999999995 7789999
Q ss_pred eCCCccccccc---cccccccCCCCCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 566 DLGSSCFQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 566 DFGla~~~~~~---~~~~~gt~~Y~APE~l~-----~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
|||++...... .....+++.|+|||++. +..++.++|||||||++|+|++|..||...........+.....
T Consensus 154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~ 233 (272)
T cd06637 154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA 233 (272)
T ss_pred cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCC
Confidence 99998754322 23356788999999986 33588899999999999999999999976655444433322110
Q ss_pred CCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 638 ~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
+. .........+..++..||... |..|+++++++ +|+
T Consensus 234 ~~-----------~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 234 PR-----------LKSKKWSKKFQSFIESCLVKN----HSQRPTTEQLMKHPFI 272 (272)
T ss_pred CC-----------CCCCCcCHHHHHHHHHHcCCC----hhhCCCHHHHhhCCCC
Confidence 00 000112345667777777643 88899999888 774
No 163
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-33 Score=304.35 Aligned_cols=248 Identities=22% Similarity=0.271 Sum_probs=198.5
Q ss_pred eeCceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005415 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (697)
Q Consensus 407 ~~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~---~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~ 483 (697)
..+++..+...+.+.||+|.||+||+|+|.. .||||+++. .....+.+..|+.++++-+ |-||+-+.|
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTR------H~NIlLFMG 455 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTR------HENILLFMG 455 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcc------hhhheeeeh
Confidence 4567777888999999999999999999754 599999974 3456778889999999876 669999999
Q ss_pred EEEecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 484 ~f~~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
++..... .||+-+|+| +|+.++...... |.....+.|++||++||.|||.++|||||||..||++.. +++|
T Consensus 456 ~~~~p~~-AIiTqwCeGsSLY~hlHv~etk-----fdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~--~~kV 527 (678)
T KOG0193|consen 456 ACMNPPL-AIITQWCEGSSLYTHLHVQETK-----FDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE--DLKV 527 (678)
T ss_pred hhcCCce-eeeehhccCchhhhhccchhhh-----hhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEcc--CCcE
Confidence 9988776 899999987 577776544432 889999999999999999999999999999999999995 6999
Q ss_pred EEeeCCCcccccc-----ccccccccCCCCCchhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Q 005415 563 KIIDLGSSCFQTD-----NLCLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 634 (697)
Q Consensus 563 KL~DFGla~~~~~-----~~~~~~gt~~Y~APE~l~~---~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~ 634 (697)
||+|||++..... ......|..-|||||++.. .+|+..+|||||||++|||++|..||......+++..+-+
T Consensus 528 kIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGr 607 (678)
T KOG0193|consen 528 KIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGR 607 (678)
T ss_pred EEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecc
Confidence 9999999854322 2333566788999999964 4699999999999999999999999997777777766655
Q ss_pred hhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhc
Q 005415 635 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIR 679 (697)
Q Consensus 635 ~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r 679 (697)
..+.++.... .-++...+..++.+||+-....+|+-.
T Consensus 608 G~l~pd~s~~--------~s~~pk~mk~Ll~~C~~~~~~eRP~F~ 644 (678)
T KOG0193|consen 608 GYLMPDLSKI--------RSNCPKAMKRLLSDCWKFDREERPLFP 644 (678)
T ss_pred cccCccchhh--------hccCHHHHHHHHHHHHhcCcccCccHH
Confidence 4444433221 113344899999999997755554443
No 164
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.4e-31 Score=277.15 Aligned_cols=250 Identities=19% Similarity=0.245 Sum_probs=200.8
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
....|.+.+.||.|++|.||+|.+..+++.||+|++..+......+.+|+.+++.++ ||||+++++++......
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 77 (263)
T cd05052 4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTREPPF 77 (263)
T ss_pred chHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCC------CCChhheEEEEcCCCCc
Confidence 345799999999999999999999999999999999876555567788999888874 78999999999999999
Q ss_pred EEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||++ ++|.+++..... ..+++..++.++.|++.||.|||+++++||||||+||+++. ++.+||+|||++
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~df~~~ 151 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLS 151 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCcEEeCCCccc
Confidence 99999997 567776654322 22788899999999999999999999999999999999985 788999999998
Q ss_pred ccccccccc----ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 571 CFQTDNLCL----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 571 ~~~~~~~~~----~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
......... ...+..|+|||.+.+..++.++|||||||++|+|++ |..||++.+..+....+.....+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----- 226 (263)
T cd05052 152 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMER----- 226 (263)
T ss_pred cccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC-----
Confidence 765433211 123567999999999899999999999999999998 9999998877766666543221110
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
.......+..++..||.. .|..|+++.++..-|
T Consensus 227 -------~~~~~~~~~~li~~cl~~----~p~~Rp~~~~l~~~l 259 (263)
T cd05052 227 -------PEGCPPKVYELMRACWQW----NPSDRPSFAEIHQAF 259 (263)
T ss_pred -------CCCCCHHHHHHHHHHccC----CcccCCCHHHHHHHH
Confidence 012245677788888875 488899998887433
No 165
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.6e-32 Score=281.79 Aligned_cols=256 Identities=28% Similarity=0.366 Sum_probs=200.9
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
++|++++.||.|++|.||++.+..++..||+|++.... .....+..|+.+++.++ ||||+++++.+......+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~ 78 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK------HPNIVGLYEAYFYENKLW 78 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC------CCceeEEEEEEecCCeEE
Confidence 57999999999999999999998899999999987543 34456778888888775 789999999999999999
Q ss_pred EEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||+++ +|..++..... .+++..++.++.|++.||.|||+++|+|+||+|+||+++. ++.++|+|||.+.
T Consensus 79 lv~e~~~~~~L~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~--~~~~~l~d~g~~~ 151 (280)
T cd06611 79 ILIEFCDGGALDSIMLELER-----GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL--DGDVKLADFGVSA 151 (280)
T ss_pred EEeeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECC--CCCEEEccCccch
Confidence 99999986 55555443221 2889999999999999999999999999999999999985 7889999999876
Q ss_pred ccccc---cccccccCCCCCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~-----~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
..... .....+++.|+|||.+. +..++.++|+|||||++|+|++|++||...+....+..+..... +...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~- 229 (280)
T cd06611 152 KNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP-PTLD- 229 (280)
T ss_pred hhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC-CCcC-
Confidence 54322 23356788999999985 34577899999999999999999999988776665555532211 1000
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCCC
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQNK 696 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n~ 696 (697)
. .. .....+..++..||.. .|..|.++++++ +|+.....|+
T Consensus 230 --~----~~--~~~~~~~~li~~~l~~----~p~~Rps~~~il~~~~~~~~~~~~ 272 (280)
T cd06611 230 --Q----PS--KWSSSFNDFLKSCLVK----DPDDRPTAAELLKHPFVSDQSDNK 272 (280)
T ss_pred --C----cc--cCCHHHHHHHHHHhcc----ChhhCcCHHHHhcChhhcccchhH
Confidence 0 00 1123566677777764 488999999999 9998776553
No 166
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.4e-32 Score=290.56 Aligned_cols=264 Identities=30% Similarity=0.478 Sum_probs=209.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-- 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~-- 487 (697)
..+|++.+.||.|++|.||+|.+..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~ 77 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK------HDNIIAIRDILRPPG 77 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC------CCCccCHHHhccccC
Confidence 468999999999999999999999999999999987532 23455667888888775 7899999998863
Q ss_pred --cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 488 --LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 488 --~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
...+++||||+.++|..++.... .+++..+..++.||+.||.|||+++|+||||||+||+++. ++.+||+
T Consensus 78 ~~~~~~~lv~e~~~~~l~~~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~ 149 (334)
T cd07855 78 ADFKDVYVVMDLMESDLHHIIHSDQ------PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE--DCELRIG 149 (334)
T ss_pred CCCceEEEEEehhhhhHHHHhccCC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEec
Confidence 35689999999988877765322 2889999999999999999999999999999999999995 8899999
Q ss_pred eCCCcccccccc-------ccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 566 DLGSSCFQTDNL-------CLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 566 DFGla~~~~~~~-------~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
|||++....... ....++..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+....+..+...+|
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g 229 (334)
T cd07855 150 DFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG 229 (334)
T ss_pred ccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhC
Confidence 999986543221 23467889999999866 4588999999999999999999999999998899999999999
Q ss_pred CCCHHHHhhcc--ccccccc----------------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 638 PIDLEMLMQGQ--EIYKYFT----------------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 638 ~~p~e~~~~~~--~~~~~~~----------------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
.++.+.+.... ...+++. ....+..++..|| ...|..|.++++++ +|+.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l----~~~P~~Rpt~~~~l~~~~~~~~~~ 302 (334)
T cd07855 230 SPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQML----QFDPEERITVEQALQHPFLAQYHD 302 (334)
T ss_pred CChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHc----cCChhhCcCHHHHHhChhhhhccC
Confidence 88887654211 1111111 1223334444444 45588899999988 99976543
No 167
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.2e-31 Score=289.75 Aligned_cols=261 Identities=30% Similarity=0.495 Sum_probs=207.2
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~- 488 (697)
..+|.+.+.||.|+||.||+|.+..+++.||||.+... ......+.+|+.+++.++ ||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~~ 87 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ------HENVIGLLDVFTSAV 87 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcC------CCCccchhheecccc
Confidence 46899999999999999999999999999999998743 222345677888888764 78999999998754
Q ss_pred -----CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 489 -----EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 489 -----~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
...++||||+..++..... ..+++..+..++.|++.||.|||+.+|+||||||+||+++. ++.++
T Consensus 88 ~~~~~~~~~lv~e~~~~~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~--~~~~k 157 (342)
T cd07879 88 SGDEFQDFYLVMPYMQTDLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE--DCELK 157 (342)
T ss_pred cCCCCceEEEEecccccCHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEE
Confidence 3469999999876654431 12788999999999999999999999999999999999995 78999
Q ss_pred EeeCCCccccccccccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 564 IIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 564 L~DFGla~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
|+|||++...........++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+....+..++...+.++++
T Consensus 158 L~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 158 ILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237 (342)
T ss_pred EeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 9999998776555555677889999999876 458899999999999999999999999998888889999888888777
Q ss_pred HHhhccccc--c-------cc---------cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 643 MLMQGQEIY--K-------YF---------TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 643 ~~~~~~~~~--~-------~~---------~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
+........ . +. .....+..++..||. ..|..|.++++++ +|+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLE----LDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcC----CChhhCcCHHHHhcCcchhhcc
Confidence 655432110 0 00 112234445555544 4488899999999 8987543
No 168
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.98 E-value=1e-31 Score=281.16 Aligned_cols=191 Identities=26% Similarity=0.373 Sum_probs=159.6
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 422 LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
||+|+||.||++.+..+|+.||+|.+.... ........|+.+++.++ ||||+++++++....+.++||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN------SPFIVNLAYAFESKTHLCLVMSL 74 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC------CCcEEEEEEEEecCCeEEEEEec
Confidence 799999999999999999999999986432 12234456888887764 78999999999999999999999
Q ss_pred ccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+.+ +|...+..... ..+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++......
T Consensus 75 ~~g~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 75 MNGGDLKYHIYNVGE----RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD--QGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCCHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC--CCCEEEeeceeeeecCCC
Confidence 975 55555543222 22788889999999999999999999999999999999985 788999999998665432
Q ss_pred --cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc
Q 005415 577 --LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA 624 (697)
Q Consensus 577 --~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~ 624 (697)
.....+++.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~ 198 (277)
T cd05607 149 KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK 198 (277)
T ss_pred ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCc
Confidence 223567899999999999889999999999999999999999997643
No 169
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.98 E-value=8e-32 Score=281.75 Aligned_cols=255 Identities=29% Similarity=0.386 Sum_probs=199.9
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~-~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
|++.+.||.|+||.||++.+..++..+++|.+... ......+.+|+.+++.+. ||||+++++++......++|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD------HPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCC------CCCeeeEEEEEeeCCEEEEE
Confidence 67889999999999999999999999999998753 334456777888888764 78999999999999999999
Q ss_pred EEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 495 CELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 495 mEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
|||+.++.+........ ..+++..+..++.|++.||.|||+.||+||||||+||+++. ++.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~ 154 (282)
T cd06643 81 IEFCAGGAVDAVMLELE----RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL--DGDIKLADFGVSAKNT 154 (282)
T ss_pred EEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc--CCCEEEcccccccccc
Confidence 99998655443322211 23889999999999999999999999999999999999985 7889999999986543
Q ss_pred cc---cccccccCCCCCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 575 DN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 575 ~~---~~~~~gt~~Y~APE~l~-----~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
.. .....+++.|+|||++. +..++.++|+|||||++|+|++|.+||...+..+.+..+.....+...
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 229 (282)
T cd06643 155 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLA----- 229 (282)
T ss_pred ccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCC-----
Confidence 32 22346788999999984 345788999999999999999999999888776666665433221110
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCCC
Q 005415 647 GQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQNK 696 (697)
Q Consensus 647 ~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n~ 696 (697)
........+..++..||... |..|.++++++ +|+.....++
T Consensus 230 -----~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~~~~ 272 (282)
T cd06643 230 -----QPSRWSSEFKDFLKKCLEKN----VDARWTTTQLLQHPFVTVNSNKP 272 (282)
T ss_pred -----CccccCHHHHHHHHHHccCC----hhhCcCHHHHhcCCCEeccCCCC
Confidence 00112346777888887755 88899999998 9988766654
No 170
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.98 E-value=7.1e-32 Score=291.65 Aligned_cols=263 Identities=32% Similarity=0.526 Sum_probs=211.6
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+.++|++.+.||.|++|.||+|.+..+++.||+|++... ........+|+.+++.+. ||||+++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~ 86 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD------HENVIGLLDVFTPA 86 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhcc------CCCHHHHHHHhhcc
Confidence 457899999999999999999999999999999998642 223355667888887774 78999999988765
Q ss_pred Ce------EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 489 EH------LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 489 ~~------l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
.. .++|+||++++|.+++.. ..+++..++.++.||+.||.|||+.||+|+||+|+||+++. ++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~L~~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~--~~~~ 157 (343)
T cd07851 87 SSLEDFQDVYLVTHLMGADLNNIVKC-------QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCEL 157 (343)
T ss_pred ccccccccEEEEEecCCCCHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCE
Confidence 54 899999999888887753 12889999999999999999999999999999999999995 7889
Q ss_pred EEeeCCCccccccccccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 563 KL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
+|+|||++...........++..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+.+.++.++.
T Consensus 158 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 158 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred EEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 999999998766555556788899999998653 6788999999999999999999999999988899999998888887
Q ss_pred HHHhhcccc--ccc----------------ccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 642 EMLMQGQEI--YKY----------------FTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 642 e~~~~~~~~--~~~----------------~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.++.+.... ..+ ......+..++..|+ ...|..|+|+++++ +|+..+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l----~~~P~~Rpt~~ell~h~~~~~~~ 305 (343)
T cd07851 238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKML----VLDPDKRITAAEALAHPYLAEYH 305 (343)
T ss_pred HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhC----CCChhhCCCHHHHhcCCCccccC
Confidence 665432110 000 011233444444444 45588899999998 8987553
No 171
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.98 E-value=6.6e-32 Score=296.07 Aligned_cols=257 Identities=21% Similarity=0.297 Sum_probs=195.0
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCC-----CcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~-----g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~ 483 (697)
...++|++.+.||+|+||.||+|++... +..||||+++.. ......+.+|+.+++.+. +|+||+++++
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~-----~h~nIv~~~~ 109 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG-----QHKNIVNLLG 109 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc-----cCCceeeEee
Confidence 3356899999999999999999986543 357999999753 233456778999998873 3889999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHHhhhcc--------------------------------------------------
Q 005415 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQES-------------------------------------------------- 512 (697)
Q Consensus 484 ~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~-------------------------------------------------- 512 (697)
++......++||||+. ++|.+++......
T Consensus 110 ~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 110 ACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred EecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 9999999999999997 5677766432110
Q ss_pred --------------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccccc
Q 005415 513 --------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLC 578 (697)
Q Consensus 513 --------------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~~ 578 (697)
.....+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~--~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD--GRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC--CCeEEEeeceeeeeccCCcc
Confidence 01123788889999999999999999999999999999999984 78899999999865432211
Q ss_pred -----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccc
Q 005415 579 -----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYK 652 (697)
Q Consensus 579 -----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~ 652 (697)
...++..|+|||++.+..++.++|||||||++|+|++ |..||........+..++.....++. ..
T Consensus 268 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~---------~~ 338 (374)
T cd05106 268 YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSR---------PD 338 (374)
T ss_pred eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccC---------CC
Confidence 1223567999999998899999999999999999997 99999876655444444332111110 00
Q ss_pred cccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 653 YFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 653 ~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
.....+..++..||... |..|++++++...|
T Consensus 339 --~~~~~l~~li~~cl~~d----p~~RPs~~~l~~~l 369 (374)
T cd05106 339 --FAPPEIYSIMKMCWNLE----PTERPTFSQISQLI 369 (374)
T ss_pred --CCCHHHHHHHHHHcCCC----hhhCcCHHHHHHHH
Confidence 12356778888888755 77888888887544
No 172
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.98 E-value=2e-31 Score=275.16 Aligned_cols=251 Identities=24% Similarity=0.323 Sum_probs=199.1
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+..++|+++++||+|+||.||+|.+ .+++.||+|.+.........+.+|+.+++.++ |+||+++++++. ...
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~-~~~ 74 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQ------HPRLVRLYAVVT-QEP 74 (260)
T ss_pred cchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcC------CcCeeeEEEEEc-cCC
Confidence 4567899999999999999999985 46788999999876655567888998888874 789999999874 467
Q ss_pred EEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.++||||+. ++|.+.+..... ..+++..+..++.|++.||.|||+.|++||||||+||+++. ++.++|+|||+
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~ 148 (260)
T cd05067 75 IYIITEYMENGSLVDFLKTPEG----IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSE--TLCCKIADFGL 148 (260)
T ss_pred cEEEEEcCCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcC--CCCEEEccCcc
Confidence 899999996 567776654322 23888999999999999999999999999999999999995 78899999999
Q ss_pred cccccccc----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 570 SCFQTDNL----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 570 a~~~~~~~----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
+....... ....++..|+|||++.+..++.++||||||+++|+|++ |++||.+.+..+....+......+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 225 (260)
T cd05067 149 ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRP--- 225 (260)
T ss_pred eeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCC---
Confidence 86654221 12234568999999998889999999999999999999 99999988877766665433221110
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
......+..++..||.. .|..|++++++..+|..
T Consensus 226 ---------~~~~~~~~~li~~~l~~----~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 ---------DNCPEELYELMRLCWKE----KPEERPTFEYLRSVLED 259 (260)
T ss_pred ---------CCCCHHHHHHHHHHccC----ChhhCCCHHHHHHHhhc
Confidence 11234566777777664 48889999999887754
No 173
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.98 E-value=1.7e-31 Score=276.77 Aligned_cols=249 Identities=24% Similarity=0.303 Sum_probs=195.1
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..++|++.++||+|+||.||+|.+..+ ..||+|+++........+.+|+.+++.++ ||||+++++.+. ....
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~~~~~~-~~~~ 75 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQLYAVVS-EEPI 75 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCC------CCCcceEEEEEC-CCCc
Confidence 457899999999999999999987655 46999999865544567788999888874 789999999874 4568
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+.+ +|.+++..... ..+++..+..++.|++.||.|||+.+|+|+||||+||+++. ++.++|+|||.+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~--~~~~~L~dfg~~ 149 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLA 149 (262)
T ss_pred EEEEEcCCCCcHHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC--CCcEEeccCCce
Confidence 999999974 77777753221 23788999999999999999999999999999999999985 788999999998
Q ss_pred cccccccc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 571 CFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 571 ~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
........ ...++..|+|||++.+..++.++|||||||++|+|++ |.+||.+....+.+..+...... +.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~-~~---- 224 (262)
T cd05071 150 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM-PC---- 224 (262)
T ss_pred eeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC-CC----
Confidence 75543221 1234567999999998889999999999999999999 99999888777766665432211 10
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
.......+..++..||+.. |..|.+++++..+|.
T Consensus 225 -------~~~~~~~l~~li~~~l~~~----p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 225 -------PPECPESLHDLMCQCWRKE----PEERPTFEYLQAFLE 258 (262)
T ss_pred -------ccccCHHHHHHHHHHccCC----cccCCCHHHHHHHHH
Confidence 0122345667777777544 888999998886654
No 174
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.98 E-value=3.1e-31 Score=285.01 Aligned_cols=266 Identities=32% Similarity=0.456 Sum_probs=207.6
Q ss_pred ceEEEEEeccCCCCceEEEEECCC--CcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHT--GVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL- 488 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~--g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~- 488 (697)
+|++.+.||+|+||.||++.+..+ +..||+|.+... ........+|+.+++.+. +||||+++++.+...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~ 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR-----GHKNITCLYDMDIVFP 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc-----CCCChheeeeeeeecc
Confidence 589999999999999999999887 899999998742 223456678888888874 378999999875432
Q ss_pred ---CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 489 ---EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 489 ---~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
...+++||+++++|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.++|+
T Consensus 76 ~~~~~~~~~~e~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~--~~~~kl~ 147 (332)
T cd07857 76 GNFNELYLYEELMEADLHQIIRSGQ------PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA--DCELKIC 147 (332)
T ss_pred ccCCcEEEEEecccCCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC--CCCEEeC
Confidence 4589999999988888775332 2889999999999999999999999999999999999985 7889999
Q ss_pred eCCCccccccc-------cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 566 DLGSSCFQTDN-------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 566 DFGla~~~~~~-------~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
|||.+...... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+....+..++..+|
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 227 (332)
T cd07857 148 DFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG 227 (332)
T ss_pred cCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC
Confidence 99998654321 123467889999998876 4689999999999999999999999999999999999999999
Q ss_pred CCCHHHHhhccccc-------------ccccC-CchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 638 PIDLEMLMQGQEIY-------------KYFTK-EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 638 ~~p~e~~~~~~~~~-------------~~~~~-~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.++.+.+....... ..+.. .......+.+...+.+...|..|.|++++. +|+..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~ 299 (332)
T cd07857 228 TPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH 299 (332)
T ss_pred CCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence 88876654321100 00000 011122334444444456688899999999 9997664
No 175
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.98 E-value=2.9e-31 Score=287.09 Aligned_cols=267 Identities=29% Similarity=0.488 Sum_probs=210.6
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+.++|++++.||+|+||.||++.+..++..||||++... ......+.+|+.+++.++ ||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~ 86 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK------HENVIGLLDVFTPD 86 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC------CCCccceeeeecCC
Confidence 467899999999999999999999999999999998642 223345678888888775 78999999998765
Q ss_pred C------eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 489 E------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 489 ~------~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
. ..++||||++++|..++... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~~~~~-------~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~--~~~~ 157 (343)
T cd07880 87 LSLDRFHDFYLVMPFMGTDLGKLMKHE-------KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE--DCEL 157 (343)
T ss_pred ccccccceEEEEEecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCE
Confidence 3 45899999987777665421 2889999999999999999999999999999999999985 7889
Q ss_pred EEeeCCCccccccccccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 563 KL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
+|+|||.+...........+++.|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+....+..++...+.++.
T Consensus 158 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 158 KILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred EEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999999876655555677899999999876 35889999999999999999999999998888888888888777776
Q ss_pred HHHhhcccc--ccccc------------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 642 EMLMQGQEI--YKYFT------------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 642 e~~~~~~~~--~~~~~------------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
++....... ..+.. ..........+...+.+...|..|.|+.+++ +|+..+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence 655432110 01100 0011222234455555666688899999998 9987653
No 176
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.98 E-value=1.8e-31 Score=281.33 Aligned_cols=263 Identities=25% Similarity=0.394 Sum_probs=207.0
Q ss_pred ceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 410 ~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
....++|++.+.||.|+||.||+|.++.+++.||+|+++... .......+|+.+++.++ ||||+++++++.
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~------h~~i~~~~~~~~ 76 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN------HRNIVNLKEIVT 76 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC------CCCeeeeeheec
Confidence 445678999999999999999999999999999999997532 22345567888887774 789999999987
Q ss_pred ecC----------eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc
Q 005415 487 HLE----------HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (697)
Q Consensus 487 ~~~----------~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~ 556 (697)
... .+++||||+++++...+.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~ 151 (302)
T cd07864 77 DKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNN 151 (302)
T ss_pred CcchhhhccccCCcEEEEEcccCccHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence 654 799999999998877765432 12889999999999999999999999999999999999985
Q ss_pred cCcceEEEeeCCCcccccccc----ccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Q 005415 557 YQRCEIKIIDLGSSCFQTDNL----CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILAR 631 (697)
Q Consensus 557 ~~~~~vKL~DFGla~~~~~~~----~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~ 631 (697)
++.+||+|||.+....... ....++..|+|||.+.+. .++.++|||||||++|+|++|++||...+..+.+..
T Consensus 152 --~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~ 229 (302)
T cd07864 152 --KGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL 229 (302)
T ss_pred --CCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 7889999999987654322 123457789999998654 478899999999999999999999999888888888
Q ss_pred HHHhhCCCCHHHHhhccccccc-----------------ccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 632 IIGMLGPIDLEMLMQGQEIYKY-----------------FTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 632 I~~~lg~~p~e~~~~~~~~~~~-----------------~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
+.+..+.++...+........+ -.-+..+..++..||. ..|..|.++++++ +|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 230 ISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLT----LDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHcc----CChhhCCCHHHHhcCCCC
Confidence 8888877766554332111110 0113445555666654 4588899999988 775
No 177
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.98 E-value=2.2e-31 Score=283.19 Aligned_cols=200 Identities=30% Similarity=0.397 Sum_probs=170.5
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.+.||+|+||.||++.+..++..+|+|.+... .....++.+|+++++.++ ||||+++++++...+.+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 74 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECN------SPYIVGFYGAFYSDGEI 74 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEeeCCEE
Confidence 3699999999999999999999999999999998753 233456778888888774 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEeeCCC
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
++||||+.+ +|.+++.... .+++..+..++.|++.||.|||+ .+++|+||||+|||++. ++.++|+|||+
T Consensus 75 ~lv~ey~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~ 146 (308)
T cd06615 75 SICMEHMDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGV 146 (308)
T ss_pred EEEeeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec--CCcEEEccCCC
Confidence 999999975 6766665332 27889999999999999999997 58999999999999985 78899999998
Q ss_pred ccccccc-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH
Q 005415 570 SCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVM 627 (697)
Q Consensus 570 a~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e 627 (697)
+...... .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~ 205 (308)
T cd06615 147 SGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE 205 (308)
T ss_pred cccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh
Confidence 8654332 334567899999999988889999999999999999999999998765433
No 178
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.98 E-value=1.9e-31 Score=277.43 Aligned_cols=252 Identities=26% Similarity=0.333 Sum_probs=204.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.+.||.|++|.||+|.+..+++.||+|++.... .....+.+|+.+++.++ |+||+++++++......
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 74 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCR------SPYITKYYGSFLKGSKL 74 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcC------CCCeeeeeEEEEECCeE
Confidence 47899999999999999999999999999999987542 33456678888888775 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++|+||+.+ +|.+++... .+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~ 145 (274)
T cd06609 75 WIIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE--EGDVKLADFGVS 145 (274)
T ss_pred EEEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEcccccc
Confidence 999999975 666665432 3889999999999999999999999999999999999995 788999999998
Q ss_pred cccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||...+.......+.....+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----- 220 (274)
T cd06609 146 GQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEG----- 220 (274)
T ss_pred eeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcc-----
Confidence 765433 234567888999999999889999999999999999999999998777665555544332211110
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQN 695 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n 695 (697)
..-...+..++..||.. .|..|+|+++++ +|+....++
T Consensus 221 ------~~~~~~~~~~l~~~l~~----~p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 221 ------NKFSKPFKDFVSLCLNK----DPKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred ------cccCHHHHHHHHHHhhC----ChhhCcCHHHHhhChhhcCCCcc
Confidence 00233566777777764 488899999998 999877765
No 179
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.98 E-value=2.3e-31 Score=273.65 Aligned_cols=244 Identities=24% Similarity=0.354 Sum_probs=195.0
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
+|++.+.||.|+||.||++.+..+++.+|+|.++.. ....+....|+.+++.++ |+||+++++.+.....++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~ 74 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMK------HPNIVAFKESFEADGHLY 74 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCC------CCCcceEEEEEEECCEEE
Confidence 589999999999999999999999999999998643 233456677888877764 789999999999999999
Q ss_pred EEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||++ +++.+++..... ..+++..+..++.||+.||.|||++||+|+||||+||+++. ++.++|+|||.+.
T Consensus 75 lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~ 148 (255)
T cd08219 75 IVMEYCDGGDLMQKIKLQRG----KLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ--NGKVKLGDFGSAR 148 (255)
T ss_pred EEEeeCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECC--CCcEEEcccCcce
Confidence 9999997 467666653221 22788999999999999999999999999999999999985 7889999999986
Q ss_pred ccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
..... .....+++.|+|||++.+..++.++|+||||+++|+|++|..||...+....+..+......+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------- 221 (255)
T cd08219 149 LLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLP------- 221 (255)
T ss_pred eecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCC-------
Confidence 55432 22356788999999999888999999999999999999999999988776666665432211111
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
. .....+..++..||... |..|+++++++
T Consensus 222 ---~--~~~~~~~~li~~~l~~~----P~~Rp~~~~il 250 (255)
T cd08219 222 ---S--HYSYELRSLIKQMFKRN----PRSRPSATTIL 250 (255)
T ss_pred ---c--ccCHHHHHHHHHHHhCC----cccCCCHHHHh
Confidence 0 11234666777776654 88888888775
No 180
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.98 E-value=2e-31 Score=275.16 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=198.5
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+..++|++.++||+|+||.||+|.+. .+..||+|.+.........+.+|+.+++.++ |+||+++++++. ...
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~~~~~~-~~~ 74 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLR------HDKLVQLYAVVS-EEP 74 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcC------CCceEEEEeEEC-CCC
Confidence 44578999999999999999999864 5677999999875555567888999988875 789999999875 456
Q ss_pred EEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.++||||+. ++|.+++.... ...+++..++.++.|++.||.|||+++|+||||||+||+++. ++.++|+|||.
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~--~~~~~l~dfg~ 148 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKDGE----GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD--GLVCKIADFGL 148 (260)
T ss_pred cEEEEEecCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC--CceEEeCCcee
Confidence 899999997 46777665322 123789999999999999999999999999999999999985 78899999999
Q ss_pred ccccccccc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 570 SCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 570 a~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
+........ ...++..|+|||.+.+..++.++||||||+++|+|++ |.+||.+.+..+.+..+..... ++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~--- 224 (260)
T cd05070 149 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR-MPC--- 224 (260)
T ss_pred eeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCC---
Confidence 876543221 1234567999999988889999999999999999999 9999998877776666543211 110
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
.......+..++..||... |..|+|++++..+|..
T Consensus 225 --------~~~~~~~~~~li~~~l~~~----p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 --------PQDCPISLHELMLQCWKKD----PEERPTFEYLQSFLED 259 (260)
T ss_pred --------CCcCCHHHHHHHHHHcccC----cccCcCHHHHHHHHhc
Confidence 1122346777888888754 8889999999888765
No 181
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.98 E-value=2.3e-31 Score=274.06 Aligned_cols=243 Identities=21% Similarity=0.311 Sum_probs=195.6
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
.+|++.+.||+|+||.||++.+. .+..+|+|.+.........+..|+.+++.++ ||||+++++++......++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLS------HPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCC------CCCceeEEEEEccCCCEEE
Confidence 46899999999999999999864 4568999998765544567788999998874 7899999999999999999
Q ss_pred EEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
||||+. ++|.+++..... .+++..+..++.|++.||.|||+++|+|+||||+||+++. ++.+||+|||.+..
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~d~g~~~~ 149 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQG-----KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS--TGVVKVSDFGMTRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC--CCeEEECCCCCccc
Confidence 999997 567666653221 2788999999999999999999999999999999999984 78899999998875
Q ss_pred cccccc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 573 QTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 573 ~~~~~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... ...++..|+|||.+.+..++.++|+||||+++|+|++ |+.||...+..+.+..+........+.
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~----- 224 (256)
T cd05114 150 VLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPK----- 224 (256)
T ss_pred cCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCC-----
Confidence 432211 1234567999999998889999999999999999999 999999888877777775532211110
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
.....+..++..||... |..|++++++.
T Consensus 225 -------~~~~~~~~li~~c~~~~----p~~Rps~~~l~ 252 (256)
T cd05114 225 -------LASMTVYEVMYSCWHEK----PEGRPTFAELL 252 (256)
T ss_pred -------CCCHHHHHHHHHHccCC----cccCcCHHHHH
Confidence 12346788889999766 77888888876
No 182
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.98 E-value=9.6e-32 Score=279.94 Aligned_cols=253 Identities=22% Similarity=0.237 Sum_probs=200.1
Q ss_pred CceEEEEEeccCCCCceEEEEECC-----CCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~-----~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
++|.+.+.||+|+||.||+|.+.. +++.||||+++.... ....+.+|+++++.+. |+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~ 78 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ------HENIVKFYGVCT 78 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcC------CCCchheeeEEe
Confidence 568999999999999999998643 468899999875432 3467788999988874 789999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhc--------cCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQE--------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 557 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~--------~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~ 557 (697)
.....++||||+. ++|.+++..... ......+++..+..++.|++.||.|||++|++||||||+||+++.
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~- 157 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY- 157 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC-
Confidence 9999999999997 567777654321 112233788899999999999999999999999999999999985
Q ss_pred CcceEEEeeCCCccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHH
Q 005415 558 QRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILAR 631 (697)
Q Consensus 558 ~~~~vKL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~ 631 (697)
++.++|+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+..+.+..
T Consensus 158 -~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05049 158 -DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC 236 (280)
T ss_pred -CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 789999999998653221 122334678999999999999999999999999999999 9999988877777666
Q ss_pred HHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 632 IIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 632 I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
+.....+++. ......+..++..||... |..|+++++++.+|.
T Consensus 237 ~~~~~~~~~~------------~~~~~~~~~li~~~l~~~----p~~Rp~~~eil~~l~ 279 (280)
T cd05049 237 ITQGRLLQRP------------RTCPSEVYDIMLGCWKRD----PQQRINIKDIHERLQ 279 (280)
T ss_pred HHcCCcCCCC------------CCCCHHHHHHHHHHcCCC----cccCCCHHHHHHHhh
Confidence 6532222211 123456778888888754 888999999887663
No 183
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.98 E-value=1.2e-31 Score=278.99 Aligned_cols=257 Identities=32% Similarity=0.469 Sum_probs=208.8
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~---~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
|++.+.||.|++|.||+|.+..+++.+++|.+..... ......+|+.+++.++ |+||+++++++......+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 74 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN------HPNIIKLLDVFRHKGDLY 74 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhc------CCCcchHHHhhccCCCEE
Confidence 6778999999999999999988999999999875432 3456777888888775 789999999999999999
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
+||||+++++.+.+.... ..+++..+..++.|++.||.|||+.+|+|+||+|+||+++. ++.++|+|||.+..
T Consensus 75 ~v~e~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~df~~~~~ 147 (283)
T cd05118 75 LVFEFMDTDLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINT--EGVLKLADFGLARS 147 (283)
T ss_pred EEEeccCCCHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC--CCcEEEeeeeeeEe
Confidence 999999998888776532 12889999999999999999999999999999999999985 78899999998866
Q ss_pred ccccc---ccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 573 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 573 ~~~~~---~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
..... ....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.+.+..+.+.++.+.++.+....+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd05118 148 FGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFT 227 (283)
T ss_pred cCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccch
Confidence 54432 234567889999999876 78999999999999999999999999999988888988888877666554432
Q ss_pred ccccc-----------------ccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 649 EIYKY-----------------FTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 649 ~~~~~-----------------~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
..... -.....+..++..||.. .|..|++++++. +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~----~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 228 SLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHY----DPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhcc----CcccCcCHHHHhhCCCC
Confidence 20000 01134555666666654 488899999988 775
No 184
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=4.1e-31 Score=275.56 Aligned_cols=261 Identities=28% Similarity=0.380 Sum_probs=203.1
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe--
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH-- 490 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~-- 490 (697)
|++.+.||+|+||.||+|++..+++.||+|+++... .......+|+.+++.+.. ..||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~~i~~~~~~~~~~~~~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES---FEHPNIVRLLDVCHGPRTDR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc---cCCCCcceEEEEEeeccCCC
Confidence 688999999999999999998889999999997432 222345678888887753 358999999999998776
Q ss_pred ---EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 491 ---LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 491 ---l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
.+++|||+.+++.+++...... .+++..++.++.|++.||.|||+.+++|+||+|+||+++. ++.++|+||
T Consensus 78 ~~~~~l~~e~~~~~l~~~l~~~~~~----~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~--~~~~~l~df 151 (287)
T cd07838 78 ELKLTLVFEHVDQDLATYLSKCPKP----GLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS--DGQVKIADF 151 (287)
T ss_pred CceeEEEehhcccCHHHHHHHccCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc--CCCEEEecc
Confidence 9999999998888777643321 3889999999999999999999999999999999999996 689999999
Q ss_pred CCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 568 GSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 568 Gla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
|.+...... .....++..|+|||.+.+..++.++|+|||||++|+|++|.+||.+....+.+.++.+..+.+....+.
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 152 GLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred CcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcC
Confidence 998665432 223456788999999999889999999999999999999999999999999998888766544332222
Q ss_pred hccc-cccccc-------------CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 646 QGQE-IYKYFT-------------KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 646 ~~~~-~~~~~~-------------~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.... ....+. -...+..++..||. ..|..|.++++++ +|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~----~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLT----FNPHKRISAFEALQHPYF 287 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhc----cCCccCCCHHHHhcCcCC
Confidence 1110 000000 01233445555554 3488899999988 775
No 185
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.98 E-value=4.4e-31 Score=271.36 Aligned_cols=244 Identities=24% Similarity=0.301 Sum_probs=200.0
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++++.||.|+||.||.+++..+++.+++|.+... ......+.+|+.+++.++ |+||+++++++.....+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~ 74 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQ------HPNIIAYYNHFMDDNTL 74 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCC------CCCeeEEEeEEecCCeE
Confidence 699999999999999999999999999999987643 334456778888888774 78999999999999999
Q ss_pred EEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+. ++|.+.+.... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~~~~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~--~~~~kl~d~~~~ 148 (256)
T cd08221 75 LIEMEYANGGTLYDKIVRQK----GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK--AGLIKLGDFGIS 148 (256)
T ss_pred EEEEEecCCCcHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeC--CCCEEECcCcce
Confidence 99999997 57777765432 123789999999999999999999999999999999999985 778999999998
Q ss_pred ccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||......+....+.....++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~------ 222 (256)
T cd08221 149 KILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV------ 222 (256)
T ss_pred EEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc------
Confidence 7654332 3356789999999999888899999999999999999999999988887777776542211111
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
......+..++..||.. .|..|.++++++
T Consensus 223 ------~~~~~~~~~~i~~~l~~----~p~~R~s~~~ll 251 (256)
T cd08221 223 ------SVYSSELISLVHSLLQQ----DPEKRPTADEVL 251 (256)
T ss_pred ------cccCHHHHHHHHHHccc----CcccCCCHHHHh
Confidence 12234577777888764 488899999888
No 186
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.98 E-value=3.6e-31 Score=280.72 Aligned_cols=255 Identities=24% Similarity=0.314 Sum_probs=199.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
+.|++++.||+|+||.||++.+..+++.|++|.+.... .....+.+|+.+++.++ ||||+++++.+....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~ 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE------NPFVVSMFCSFETKR 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC------CCCeeeeEEEEecCC
Confidence 36899999999999999999999999999999987542 22345567777777654 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
++++||||+.+ +|.+++.... .+++..+..++.|++.||.|||+++|+||||||+||+++. .+.++|+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~--~~~~~l~dfg 146 (305)
T cd05609 75 HLCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITS--MGHIKLTDFG 146 (305)
T ss_pred EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECC--CCCEEEeeCC
Confidence 99999999985 5666664322 2788999999999999999999999999999999999985 7889999999
Q ss_pred Cccccccc------------------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHH
Q 005415 569 SSCFQTDN------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILA 630 (697)
Q Consensus 569 la~~~~~~------------------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~ 630 (697)
++...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.+....+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 87531110 011346778999999998889999999999999999999999999888777776
Q ss_pred HHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccC---HHHHH--HhhcccCCCC
Q 005415 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLT---LEYAA--LWLFGIDQNK 696 (697)
Q Consensus 631 ~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t---~e~~~--~wl~~~~~n~ 696 (697)
.+.......|... ......+..++..||... |..|.+ +++++ +|+...++++
T Consensus 227 ~~~~~~~~~~~~~----------~~~~~~~~~li~~~l~~~----P~~R~~~~~~~~ll~~~~~~~~~~~~ 283 (305)
T cd05609 227 QVISDDIEWPEGD----------EALPADAQDLISRLLRQN----PLERLGTGGAFEVKQHRFFLGLDWNG 283 (305)
T ss_pred HHHhcccCCCCcc----------ccCCHHHHHHHHHHhccC----hhhccCccCHHHHHhCccccCCCHHH
Confidence 6644322222110 012345677888888765 666665 55555 8988777653
No 187
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.98 E-value=2.1e-31 Score=278.11 Aligned_cols=253 Identities=21% Similarity=0.227 Sum_probs=199.1
Q ss_pred CceEEEEEeccCCCCceEEEEECCCC-----cEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTG-----VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g-----~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
++|++.+.||+|+||.||+|.+...+ ..||+|.++... .....+.+|+.++..++ ||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~ 78 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ------HPNIVCLLGVCT 78 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcC------CcccceEEEEEc
Confidence 57899999999999999999876554 689999987432 33456778888887764 789999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccc
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~~~----------~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~ 555 (697)
.....+++|||+. ++|.+++....... ....+++..+..++.||+.||.|||+++|+|+||||+||+++
T Consensus 79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG 158 (283)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc
Confidence 9899999999997 57777776432211 113478889999999999999999999999999999999998
Q ss_pred ccCcceEEEeeCCCccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHH
Q 005415 556 SYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMIL 629 (697)
Q Consensus 556 ~~~~~~vKL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l 629 (697)
. ++.++|+|||++...... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+..
T Consensus 159 ~--~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05048 159 E--GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI 236 (283)
T ss_pred C--CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 5 788999999998654322 122345778999999998889999999999999999998 99999988877766
Q ss_pred HHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 630 ARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 630 ~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
..|.....++. .-.....+..++..||... |..|++++++...|.
T Consensus 237 ~~i~~~~~~~~------------~~~~~~~~~~l~~~c~~~~----p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 237 EMIRSRQLLPC------------PEDCPARVYALMIECWNEI----PARRPRFKDIHTRLR 281 (283)
T ss_pred HHHHcCCcCCC------------cccCCHHHHHHHHHHccCC----hhhCcCHHHHHHHHh
Confidence 66543221111 0123467888999999875 777888888775554
No 188
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.98 E-value=4.2e-31 Score=272.94 Aligned_cols=249 Identities=22% Similarity=0.274 Sum_probs=198.9
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..++|++.+.||+|++|.||+|.+. .++.||+|.++........+.+|+.+++.++ ||||+++++++...+..
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 76 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLR------HPKLIQLYAVCTLEEPI 76 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCC------CCCccceeEEEecCCCe
Confidence 3467999999999999999999864 4578999999876555567788999888875 78999999999999999
Q ss_pred EEEEEcc-ccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl-~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+ .++|.+++.... ...+++..+..++.|++.||.+||++||+||||||+||+++. ++.++|+|||++
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~dfg~~ 150 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE--NNICKVADFGLA 150 (261)
T ss_pred eeeeecccCCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC--CCCEEECCcceE
Confidence 9999999 467887775432 123789999999999999999999999999999999999995 788999999998
Q ss_pred cccccccc-cccc---cCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 571 CFQTDNLC-LYVQ---SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 571 ~~~~~~~~-~~~g---t~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
........ ...+ +..|+|||.+.+..++.++||||||+++|+|++ |+.||.+......+..+......+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 226 (261)
T cd05068 151 RVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCP---- 226 (261)
T ss_pred EEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----
Confidence 76543211 1122 357999999998889999999999999999999 99999988877767666443221111
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
......+..++..||... |..|++++++..-|
T Consensus 227 --------~~~~~~~~~li~~~l~~~----P~~Rp~~~~l~~~l 258 (261)
T cd05068 227 --------PGCPKELYDIMLDCWKED----PDDRPTFETLQWKL 258 (261)
T ss_pred --------CcCCHHHHHHHHHHhhcC----cccCCCHHHHHHHH
Confidence 123356777888888654 88889988877443
No 189
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.98 E-value=1.5e-31 Score=276.81 Aligned_cols=248 Identities=23% Similarity=0.290 Sum_probs=190.5
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..+|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ +||||+++++++......
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~------~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC------KHCNIVAYFGSYLSREKL 81 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc------CCCCeeeeeEEEEeCCEE
Confidence 357999999999999999999999999999999987532 3334566788888776 488999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+++ +|.+++.... .+++..+..++.|++.||.|||+.+|+||||+|+||+++. ++.++|+|||++
T Consensus 82 ~iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg~~ 153 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD--NGDVKLADFGVA 153 (267)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEECcCccc
Confidence 999999985 5666654322 2789999999999999999999999999999999999985 778999999998
Q ss_pred cccccc---cccccccCCCCCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~---~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
...... .....+++.|+|||.+. ...++.++|+|||||++|+|++|+.||......+....+......++. .
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~- 231 (267)
T cd06646 154 AKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPK-L- 231 (267)
T ss_pred eeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCC-C-
Confidence 765332 22346788999999985 344788999999999999999999999765544333332221111110 0
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
.........+..++..||. ..|..|+++++++
T Consensus 232 ------~~~~~~~~~~~~li~~~l~----~~P~~Rp~~~~il 263 (267)
T cd06646 232 ------KDKTKWSSTFHNFVKISLT----KNPKKRPTAERLL 263 (267)
T ss_pred ------ccccccCHHHHHHHHHHhh----CChhhCcCHHHHh
Confidence 0001123456677777775 4488899998876
No 190
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=4.6e-31 Score=279.12 Aligned_cols=262 Identities=19% Similarity=0.152 Sum_probs=186.2
Q ss_pred eeCceecCceEEEEEeccCCCCceEEEEECCC---CcEEEEEEEecchhhhH-h-----HHHHHHHHHHhcccCCCCCCc
Q 005415 407 ILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDKDFFD-Q-----SLDEIKLLKLVNKNDPADEHH 477 (697)
Q Consensus 407 ~~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~---g~~VAVKii~~~~~~~~-~-----~~~Ei~iL~~L~~~~~~~hpn 477 (697)
.+.++..++|++.++||+|+||.||+|.+..+ +..+|+|+......... . ...+......+.......|++
T Consensus 5 ~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~ 84 (294)
T PHA02882 5 PLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLG 84 (294)
T ss_pred eeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCC
Confidence 34567788999999999999999999998777 67788887543221110 0 011111222222233457999
Q ss_pred eeEEEEEEEecC----eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccc
Q 005415 478 ILRLYDYFYHLE----HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENIL 553 (697)
Q Consensus 478 Iv~l~~~f~~~~----~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NIL 553 (697)
|+++++++.... ..+++|+++..++.+.+..... .++..+..++.|++.||.|||+++|+||||||+|||
T Consensus 85 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nil 158 (294)
T PHA02882 85 IPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKC------KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIM 158 (294)
T ss_pred CCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhcc------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 999998776543 4578899887777666543221 567788999999999999999999999999999999
Q ss_pred ccccCcceEEEeeCCCcccccc----------ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005415 554 IKSYQRCEIKIIDLGSSCFQTD----------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND 623 (697)
Q Consensus 554 l~~~~~~~vKL~DFGla~~~~~----------~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~ 623 (697)
++. ++.++|+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus 159 l~~--~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 159 VDG--NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EcC--CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 985 77899999999865421 112346899999999999999999999999999999999999999877
Q ss_pred cHHHHHHHHH--HhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 624 AVVMILARII--GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 624 ~~~e~l~~I~--~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
.....+.... +....+... ...+...+..+..++..||.-- +.+|++.+++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~----~~~rp~~~~l~~ 291 (294)
T PHA02882 237 GHNGNLIHAAKCDFIKRLHEG-------KIKIKNANKFIYDFIECVTKLS----YEEKPDYDALIK 291 (294)
T ss_pred ccchHHHHHhHHHHHHHhhhh-------hhccCCCCHHHHHHHHHHHhCC----CCCCCCHHHHHH
Confidence 4322222111 111111110 0112234566888888898854 777888887753
No 191
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.98 E-value=1.8e-31 Score=278.82 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=196.0
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-----
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----- 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~----- 487 (697)
.++|++.+.||.|+||.||+|.+..+++.||+|++.........+..|+.+++.+. +|+||+++++++..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS-----HHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc-----CCCcEEEEeeehhcccccC
Confidence 47899999999999999999999999999999999876555567778888888874 48899999999863
Q ss_pred -cCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 488 -LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 488 -~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
....+++|||+++ +|.+++..... ..+++..++.++.||+.||.|||+.+|+|+||+|+||+++. ++.++|+
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~--~~~~~l~ 163 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTE--NAEVKLV 163 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEe
Confidence 4678999999985 67676654322 12778889999999999999999999999999999999995 7789999
Q ss_pred eCCCccccccc---cccccccCCCCCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 566 DLGSSCFQTDN---LCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 566 DFGla~~~~~~---~~~~~gt~~Y~APE~l~-----~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
|||++...... .....+++.|+|||.+. +..++.++|+|||||++|+|++|..||........+..+...
T Consensus 164 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~-- 241 (282)
T cd06636 164 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN-- 241 (282)
T ss_pred eCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC--
Confidence 99998654322 23356788999999986 345788999999999999999999999776654444333221
Q ss_pred CCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 638 ~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.+.... .-.....+..++..||..- +..|.+.++++ +|+
T Consensus 242 -~~~~~~--------~~~~~~~~~~li~~cl~~~----p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 242 -PPPKLK--------SKKWSKKFIDFIEGCLVKN----YLSRPSTEQLLKHPFI 282 (282)
T ss_pred -CCCCCc--------ccccCHHHHHHHHHHhCCC----hhhCcCHHHHhcCCCC
Confidence 111100 0012346777888887654 88899999988 775
No 192
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.98 E-value=3e-31 Score=274.35 Aligned_cols=249 Identities=26% Similarity=0.349 Sum_probs=194.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEec----chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~----~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.+.||+|+||.||+|.+..+++.||||.++. .......+.+|+.+++.++ ||||+++++++....
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 75 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN------HPNVIKYLDSFIEDN 75 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC------CcceeeeeeeEEECC
Confidence 579999999999999999999999999999998764 2233345677888888774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..++||||+.+ +|..++...... ...+++..+..++.||+.||.|||+++|+|+||||+||+++. ++.++|+|||
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~--~~~~~l~d~g 151 (267)
T cd08228 76 ELNIVLELADAGDLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEEecCCCcHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC--CCCEEECccc
Confidence 99999999985 666666533221 123788899999999999999999999999999999999985 7789999999
Q ss_pred Ccccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHhhCCCCHHH
Q 005415 569 SSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV--VMILARIIGMLGPIDLEM 643 (697)
Q Consensus 569 la~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~--~e~l~~I~~~lg~~p~e~ 643 (697)
++....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ......+ ...+.++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~ 230 (267)
T cd08228 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI-EQCDYPPLPT 230 (267)
T ss_pred cceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH-hcCCCCCCCh
Confidence 887654322 234678889999999988899999999999999999999999965432 3333332 2222222110
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
......+..++..||... |..|+++++.+.
T Consensus 231 ----------~~~~~~~~~li~~cl~~~----p~~Rp~~~~vl~ 260 (267)
T cd08228 231 ----------EHYSEKLRELVSMCIYPD----PDQRPDIGYVHQ 260 (267)
T ss_pred ----------hhcCHHHHHHHHHHCCCC----cccCcCHHHHHH
Confidence 012345677777787654 888999888873
No 193
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=2.8e-32 Score=295.71 Aligned_cols=253 Identities=26% Similarity=0.358 Sum_probs=198.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEe---cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK---NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~---~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
+..|+++++||+||.+.||++.. .+.+.||+|.+. .+......+..|+.+|.+|+. |.+||+||+|-..++
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg-----~~~IIqL~DYEv~d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKG-----HDKIIQLYDYEVTDG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcC-----CceEEEEeeeeccCc
Confidence 46799999999999999999984 444566666554 355667889999999999985 569999999999999
Q ss_pred eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 490 ~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.+|+||||-+.+|-..+...... .+.-.++.+..||+.|+.++|+.||||.||||.|+|+. .|.+||+|||.
T Consensus 434 ~lYmvmE~Gd~DL~kiL~k~~~~-----~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV---kG~LKLIDFGI 505 (677)
T KOG0596|consen 434 YLYMVMECGDIDLNKILKKKKSI-----DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV---KGRLKLIDFGI 505 (677)
T ss_pred eEEEEeecccccHHHHHHhccCC-----CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE---eeeEEeeeech
Confidence 99999999999998888755433 33337888999999999999999999999999999998 79999999999
Q ss_pred ccccccccc-----cccccCCCCCchhhcCCC-----------CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Q 005415 570 SCFQTDNLC-----LYVQSRSYRAPEVIIGLP-----------YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 633 (697)
Q Consensus 570 a~~~~~~~~-----~~~gt~~Y~APE~l~~~~-----------~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~ 633 (697)
|.......+ ..+||+.||+||.+.... .+.++||||||||||+|+.|++||.... ..++++.
T Consensus 506 A~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~ 583 (677)
T KOG0596|consen 506 ANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLH 583 (677)
T ss_pred hcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHH
Confidence 977654433 368999999999995432 5678999999999999999999997432 2334443
Q ss_pred HhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 634 ~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
....|-. +-........+.+..+|..|.+.- |-+|+++-+++ ++|.++
T Consensus 584 aI~~P~~-------~Iefp~~~~~~~li~~mK~CL~rd----PkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 584 AITDPNH-------EIEFPDIPENDELIDVMKCCLARD----PKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred hhcCCCc-------cccccCCCCchHHHHHHHHHHhcC----cccCCCcHHHhcCcccccc
Confidence 3332211 111122333444888999887754 88899998888 887763
No 194
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.98 E-value=2.8e-31 Score=273.73 Aligned_cols=246 Identities=21% Similarity=0.301 Sum_probs=195.9
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
.+|++.+.||+|+||.||++.+. ++..+|+|++.........+.+|+.+++.++ ||||+++++++......++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLS------HPNLVQLYGVCTKQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCC------CCCEEEEEEEEcCCCceEE
Confidence 46889999999999999999875 5678999998765444456778888888764 7899999999999999999
Q ss_pred EEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
||||++ ++|.+++..... .+++..+..++.||+.||.|||++||+||||||+||+++. ++.+||+|||.+..
T Consensus 77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~dfg~~~~ 149 (256)
T cd05059 77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE--DNVVKVSDFGLARY 149 (256)
T ss_pred EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC--CCcEEECCccccee
Confidence 999996 467777654322 3889999999999999999999999999999999999985 78899999999875
Q ss_pred cccccc-c---ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 573 QTDNLC-L---YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 573 ~~~~~~-~---~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... . ..++..|+|||.+.+..++.++||||||+++|+|++ |..||...+..+....+.......
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-------- 221 (256)
T cd05059 150 VLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLY-------- 221 (256)
T ss_pred cccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCC--------
Confidence 543221 1 122357999999998899999999999999999999 899998887777666654332211
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
..-.....+..++..||... |..|+++++++.+|
T Consensus 222 ----~~~~~~~~~~~li~~cl~~~----p~~Rpt~~~~l~~l 255 (256)
T cd05059 222 ----RPKLAPTEVYTIMYSCWHEK----PEDRPAFKKLLSQL 255 (256)
T ss_pred ----CCCCCCHHHHHHHHHHhcCC----hhhCcCHHHHHHHh
Confidence 00123456778888888654 88899999988665
No 195
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.98 E-value=3.6e-31 Score=273.51 Aligned_cols=254 Identities=24% Similarity=0.341 Sum_probs=196.6
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC---
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE--- 489 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~--- 489 (697)
.++|++.+.||.|++|.||+|.+..+++.+++|++.........+.+|+.+++.+. .|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS-----NHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc-----CCCChheEEEEEEecCCCC
Confidence 47899999999999999999999889999999999876655677888999998874 3789999999997644
Q ss_pred ---eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 490 ---HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 490 ---~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
..++||||+.+ +|.+++...... ...+++..++.++.|++.||.|||+.+++|+||+|+||+++. ++.++|+
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~--~~~~~l~ 155 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKK--GKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK--NAEVKLV 155 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc--CCeEEEC
Confidence 48999999985 666665543211 123889999999999999999999999999999999999985 7889999
Q ss_pred eCCCccccccc---cccccccCCCCCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 566 DLGSSCFQTDN---LCLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 566 DFGla~~~~~~---~~~~~gt~~Y~APE~l~~-----~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
|||++...... .....++..|+|||++.. ..++.++|||||||++|+|++|..||........+..+....
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~- 234 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNP- 234 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccC-
Confidence 99988654332 223567889999999854 346788999999999999999999998766655555543221
Q ss_pred CCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 638 ~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
+.... ........+..++..||. ..|..|.|+++++ +||
T Consensus 235 --~~~~~-------~~~~~~~~~~~li~~~l~----~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 235 --PPTLK-------SPENWSKKFNDFISECLI----KNYEQRPFMEELLEHPFI 275 (275)
T ss_pred --CCCCC-------chhhcCHHHHHHHHHHhh----cChhhCcCHHHHhcCCCC
Confidence 11100 000112345566666655 4589999999998 886
No 196
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.98 E-value=6.9e-31 Score=278.01 Aligned_cols=249 Identities=27% Similarity=0.386 Sum_probs=197.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.+|++.+.||.|++|.||+|.+..+++.|++|.+.... .....+.+|+.+++.++ ||||+++++++......+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK------NPNIVNFLDSFLVGDELF 92 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcC------CCceeeeeeeEecCceEE
Confidence 57999999999999999999999999999999986432 23456677888887764 789999999999999999
Q ss_pred EEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||+.++ |..++. .. .+++..+..++.|++.||.|||+.|++|+||||+||+++. ++.++|+|||++.
T Consensus 93 lv~e~~~~~~L~~~~~-~~------~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~--~~~~kl~dfg~~~ 163 (296)
T cd06655 93 VVMEYLAGGSLTDVVT-ET------CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM--DGSVKLTDFGFCA 163 (296)
T ss_pred EEEEecCCCcHHHHHH-hc------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccCccch
Confidence 999999764 544443 21 2789999999999999999999999999999999999985 7889999999886
Q ss_pred ccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
..... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+....+..+... +.++..
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~~------ 236 (296)
T cd06655 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPELQ------ 236 (296)
T ss_pred hcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcccC------
Confidence 54332 22346788999999999888999999999999999999999999888766555444221 111110
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
........+..++..||... |..|.+++++. +|+..
T Consensus 237 ---~~~~~~~~~~~li~~~l~~d----p~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 237 ---NPEKLSPIFRDFLNRCLEMD----VEKRGSAKELLQHPFLKL 274 (296)
T ss_pred ---CcccCCHHHHHHHHHHhhcC----hhhCCCHHHHhhChHhhh
Confidence 11122345666777777654 78899999988 99874
No 197
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=9.7e-32 Score=305.81 Aligned_cols=275 Identities=20% Similarity=0.228 Sum_probs=195.5
Q ss_pred eCceecCceEEEEEeccCCCCceEEEEECCC-CcEEEE------------------EEEecchhhhHhHHHHHHHHHHhc
Q 005415 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHT-GVDVCL------------------KIIKNDKDFFDQSLDEIKLLKLVN 468 (697)
Q Consensus 408 ~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~-g~~VAV------------------Kii~~~~~~~~~~~~Ei~iL~~L~ 468 (697)
.++.+.++|++++.||+|+||+||+|..+.. +..+++ |.+.........+.+|+.+++.++
T Consensus 142 ~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~ 221 (501)
T PHA03210 142 HDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN 221 (501)
T ss_pred cchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC
Confidence 3445568999999999999999999875432 222222 222222333456778888888874
Q ss_pred ccCCCCCCceeEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCC
Q 005415 469 KNDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (697)
Q Consensus 469 ~~~~~~hpnIv~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLK 548 (697)
||||+++++++...+..|+|++++.+++.+++....... ........++.++.||+.||.|||++||+|||||
T Consensus 222 ------HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~-~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLK 294 (501)
T PHA03210 222 ------HENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDW-KDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIK 294 (501)
T ss_pred ------CCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccc-cccccHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 889999999999999999999999988888765332211 1113466788899999999999999999999999
Q ss_pred CccccccccCcceEEEeeCCCcccccccc----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCC-CCC-
Q 005415 549 PENILIKSYQRCEIKIIDLGSSCFQTDNL----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVL-FPN- 622 (697)
Q Consensus 549 P~NILl~~~~~~~vKL~DFGla~~~~~~~----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~P-F~~- 622 (697)
|+|||++. ++.+||+|||++....... ....|++.|+|||++.+..++.++|||||||++|||++|..+ |..
T Consensus 295 P~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~ 372 (501)
T PHA03210 295 LENIFLNC--DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDG 372 (501)
T ss_pred HHHEEECC--CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCC
Confidence 99999985 7889999999997654322 235789999999999999999999999999999999998754 432
Q ss_pred -CcHHHHHHHHHHhhCCCCHHHHhhccccccccc------CCchhhh---------hHHHHHHHHHHHhhhhccCHHHHH
Q 005415 623 -DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFT------KEYDLYY---------INEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 623 -~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~------~~~~l~~---------i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
......+.+++..++..+.++.........++. ....+.. -..+.+.+++...|..|.++++++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL 452 (501)
T PHA03210 373 GGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELL 452 (501)
T ss_pred CCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHh
Confidence 345566666666655443332211111111110 1111111 122335566667788899999999
Q ss_pred --Hhhcc
Q 005415 687 --LWLFG 691 (697)
Q Consensus 687 --~wl~~ 691 (697)
+|+..
T Consensus 453 ~hp~f~~ 459 (501)
T PHA03210 453 ALPLFSA 459 (501)
T ss_pred hChhhhc
Confidence 99864
No 198
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.98 E-value=6e-31 Score=271.12 Aligned_cols=252 Identities=24% Similarity=0.305 Sum_probs=201.1
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+..++|++.+.||+|+||.||+|.+. .++.||||.+.........+.+|+.+++.++ |+||+++++++.....
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 75 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLR------HDKLVQLYAVCSEEEP 75 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCC------CCCEeeeeeeeecCCc
Confidence 44578999999999999999999865 5678999999876555677888999888874 7899999999998889
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.++||||+.+ +|.+++..... ..+++..+..++.||+.||.|||+++++|+||||+||+++. ++.++|+|||.
T Consensus 76 ~~~v~e~~~~~~L~~~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~--~~~~~l~d~g~ 149 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKSGEG----KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGE--NLVCKIADFGL 149 (261)
T ss_pred eEEEEeccCCCCHHHHHhcccc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcC--CCCEEECcccc
Confidence 9999999974 67777654321 23889999999999999999999999999999999999985 78999999999
Q ss_pred ccccccccc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 570 SCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 570 a~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
+........ ....+..|+|||.+.+..++.++|+||||+++|+|++ |+.||.+......+..+......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 226 (261)
T cd05034 150 ARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRP--- 226 (261)
T ss_pred ceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---
Confidence 876543211 1223567999999998889999999999999999999 99999988887777776543322111
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
......+..++..||.. .|..|++++++..+|..
T Consensus 227 ---------~~~~~~~~~~i~~~l~~----~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 ---------PNCPEELYDLMLQCWDK----DPEERPTFEYLQSFLED 260 (261)
T ss_pred ---------CCCCHHHHHHHHHHccc----CcccCCCHHHHHHHHhc
Confidence 11234566677777654 47789999988766643
No 199
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.98 E-value=3.6e-31 Score=279.54 Aligned_cols=265 Identities=25% Similarity=0.340 Sum_probs=203.1
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
..++|++.++||.|++|.||+|.+..+++.||||++.... .......+|+++++.++ ||||+++++++...
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 79 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK------HPNVVPLIDMAVER 79 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcC------CCCccchhhheecc
Confidence 3578999999999999999999999999999999986432 12235567888888774 78999999987643
Q ss_pred --------CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcc
Q 005415 489 --------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC 560 (697)
Q Consensus 489 --------~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~ 560 (697)
..+++||||+.+++...+.... ..+++..+..++.||++||.|||++||+|+||||+||+++. ++
T Consensus 80 ~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~--~~ 152 (311)
T cd07866 80 PDKSKRKRGSVYMVTPYMDHDLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN--QG 152 (311)
T ss_pred cccccccCceEEEEEecCCcCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CC
Confidence 3479999999988877665322 23899999999999999999999999999999999999995 78
Q ss_pred eEEEeeCCCcccccccc--------------ccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcH
Q 005415 561 EIKIIDLGSSCFQTDNL--------------CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV 625 (697)
Q Consensus 561 ~vKL~DFGla~~~~~~~--------------~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~ 625 (697)
.++|+|||++....... ....+++.|+|||.+.+. .++.++|||||||++|+|++|.+||.+.+.
T Consensus 153 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~ 232 (311)
T cd07866 153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD 232 (311)
T ss_pred CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999886543211 123457789999998754 478999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCHHHHhhccccccccc------CC-------chhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 626 VMILARIIGMLGPIDLEMLMQGQEIYKYFT------KE-------YDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 626 ~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~------~~-------~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
...+..+....+.++...+.........-. .. ..+...+.+.....+...|..|.|+++++ +|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 233 IDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 888888888888776655443322221110 00 01112233444444455588899999988 774
No 200
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=6.1e-33 Score=302.40 Aligned_cols=257 Identities=26% Similarity=0.376 Sum_probs=210.9
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEe-cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~-~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.-|.|+..||.|+||+||+|..+.++-..|-|++. +.....+.++.||.||..+. ||+||+|++.|...+.+|
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~Cd------HP~ivkLl~ayy~enkLw 105 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECD------HPVIVKLLSAYYFENKLW 105 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCC------ChHHHHHHHHHhccCceE
Confidence 45888899999999999999999899888999886 34566788899999998774 899999999999999999
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
|+.|+|+|+..+.+...-... +++.+++.+++|++.||.|||+++|||||||..|||++- +|.|+|+|||.+..
T Consensus 106 iliEFC~GGAVDaimlEL~r~----LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl--dGdirLADFGVSAK 179 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLELGRV----LTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL--DGDIRLADFGVSAK 179 (1187)
T ss_pred EEEeecCCchHhHHHHHhccc----cchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe--cCcEeeeccccccc
Confidence 999999998777665543332 999999999999999999999999999999999999995 89999999998855
Q ss_pred ccc---ccccccccCCCCCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 573 QTD---NLCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 573 ~~~---~~~~~~gt~~Y~APE~l~-----~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
... ....++|||+|||||+.. ..+|++++||||||++|.||..+.+|....++.-++-+|.+. -|+.++
T Consensus 180 n~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---ePPTLl 256 (1187)
T KOG0579|consen 180 NKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTLL 256 (1187)
T ss_pred chhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---CCCccc
Confidence 433 345689999999999974 567999999999999999999999999999998888887542 222222
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCCC
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQNK 696 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n~ 696 (697)
.... |. .....++..| +..-|..|+++.+++ +|....+-||
T Consensus 257 qPS~-----Ws--~~F~DfLk~c----L~Knp~~Rp~aaqll~Hpfv~~~~SnK 299 (1187)
T KOG0579|consen 257 QPSH-----WS--RSFSDFLKRC----LVKNPRNRPPAAQLLKHPFVQNAPSNK 299 (1187)
T ss_pred Ccch-----hh--hHHHHHHHHH----HhcCCccCCCHHHHhhCcccccCCcch
Confidence 1111 11 2334455445 445588899999988 9999888776
No 201
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.98 E-value=7.2e-31 Score=284.19 Aligned_cols=266 Identities=30% Similarity=0.504 Sum_probs=208.0
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++ ||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~~iv~~~~~~~~~ 88 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK------HENVIGLLDVFTPA 88 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcC------CCcccceeeeeeec
Confidence 3578999999999999999999999999999999987532 22345667888887764 78999999988643
Q ss_pred ------CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 489 ------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 489 ------~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
...++++++++++|.+.+... .+++..++.++.||+.||.|||++||+||||||+||+++. ++.+
T Consensus 89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~ 159 (345)
T cd07877 89 RSLEEFNDVYLVTHLMGADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCEL 159 (345)
T ss_pred ccccccccEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC--CCCE
Confidence 347899999988887665421 2788999999999999999999999999999999999985 7889
Q ss_pred EEeeCCCccccccccccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 563 KIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 563 KL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
||+|||++...........++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+....+..++...+.++.
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T cd07877 160 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239 (345)
T ss_pred EEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99999998876655555678899999999876 46888999999999999999999999988888888888888887777
Q ss_pred HHHhhcccc--ccccc-----------C-CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 642 EMLMQGQEI--YKYFT-----------K-EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 642 e~~~~~~~~--~~~~~-----------~-~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
......... ..++. . .......+.+.....+...+..|.+..+++ +|+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~ 306 (345)
T cd07877 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 306 (345)
T ss_pred HHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence 665432110 00000 0 001122233444445555688899999988 998744
No 202
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.98 E-value=4.3e-31 Score=275.48 Aligned_cols=256 Identities=24% Similarity=0.315 Sum_probs=193.8
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++++.||+|+||.||++.+..+|+.||||.++... ........|+.++.+. .+||||+++++++......
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~iv~~~~~~~~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRS-----VDCPYTVTFYGALFREGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHH-----cCCCCeeeeeEEEecCCcE
Confidence 36899999999999999999999999999999987542 2223444555543332 3589999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhc-CccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~-gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||++++|.+++...... ...+++..+..++.||+.||.|||++ +++||||||+||+++. ++.+||+|||++
T Consensus 76 ~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~--~~~~kl~dfg~~ 151 (283)
T cd06617 76 WICMEVMDTSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR--NGQVKLCDFGIS 151 (283)
T ss_pred EEEhhhhcccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC--CCCEEEeecccc
Confidence 999999999888777543222 23489999999999999999999997 9999999999999985 788999999998
Q ss_pred ccccccc--ccccccCCCCCchhhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHHhhCC-CCHH
Q 005415 571 CFQTDNL--CLYVQSRSYRAPEVIIG----LPYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGP-IDLE 642 (697)
Q Consensus 571 ~~~~~~~--~~~~gt~~Y~APE~l~~----~~~s~ksDIWSLGviL~ELltG~~PF~~~-~~~e~l~~I~~~lg~-~p~e 642 (697)
....... ....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||... ...+.+..+.....+ .+..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd06617 152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAE 231 (283)
T ss_pred cccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCcc
Confidence 7654322 23467888999999865 45788999999999999999999999653 223333333221111 0000
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
.-...+..++..||... |..|++.++++ +|+....+
T Consensus 232 ------------~~~~~l~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~~ 269 (283)
T cd06617 232 ------------KFSPEFQDFVNKCLKKN----YKERPNYPELLQHPFFELHLS 269 (283)
T ss_pred ------------ccCHHHHHHHHHHccCC----hhhCcCHHHHhcCchhhhccc
Confidence 01234566666666544 88899999998 89876543
No 203
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-33 Score=286.86 Aligned_cols=204 Identities=25% Similarity=0.436 Sum_probs=179.8
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
-|.|+++||.|+||.||+|.++.+|..+|||.+.-+.. ...+..|+.|++++. .|++|++|+.|.....+|||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-LQEIIKEISIMQQC~------S~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-LQEIIKEISIMQQCK------SKYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-HHHHHHHHHHHHHcC------CchhhhhhhhhccCCceEee
Confidence 46778899999999999999999999999999876544 467888999999886 46999999999999999999
Q ss_pred EEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 495 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 495 mEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
||||+ |+..+.+..++.. +++.++..+++..++||+|||...-+|||||..|||++. +|..||+|||.+...
T Consensus 107 MEYCGAGSiSDI~R~R~K~-----L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT--~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKP-----LSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT--DGIAKLADFGVAGQL 179 (502)
T ss_pred hhhcCCCcHHHHHHHhcCC-----ccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc--cchhhhhhccccchh
Confidence 99998 5666666655443 999999999999999999999999999999999999995 899999999999876
Q ss_pred ccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Q 005415 574 TDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARI 632 (697)
Q Consensus 574 ~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I 632 (697)
.+. ..+..|||.|||||++..-+|..++||||||++..||..|++||.+..+...+..|
T Consensus 180 TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI 241 (502)
T KOG0574|consen 180 TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI 241 (502)
T ss_pred hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec
Confidence 654 45679999999999999999999999999999999999999999988776544443
No 204
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.98 E-value=1.6e-31 Score=275.49 Aligned_cols=250 Identities=23% Similarity=0.311 Sum_probs=201.4
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~-~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..+|++.++||.|+||.||+|.+.. +..+|+|++..... ....+..|+.+++.++ |+||+++++++......
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 77 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLR------HKHLISLFAVCSVGEPV 77 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCC------CcchhheeeeEecCCCe
Confidence 3569999999999999999999877 89999999986543 4556778888887764 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+++ +|.+++..... ..+++..+..++.||+.||.|||++||+|+||+|+||+++. ++.+||+|||.+
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~--~~~~kl~d~g~~ 151 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEG----QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE--DLVCKVADFGLA 151 (261)
T ss_pred EEEEeecccCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC--CceEEEccccch
Confidence 999999975 77777754321 23789999999999999999999999999999999999985 788999999998
Q ss_pred cccccccc---cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 571 CFQTDNLC---LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 571 ~~~~~~~~---~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
........ ...++..|+|||.+.+..++.++||||||+++|+|++ |+.||...+..+.+..+......+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 225 (261)
T cd05148 152 RLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPC------ 225 (261)
T ss_pred hhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCC------
Confidence 76543221 2234567999999998889999999999999999998 8999998887777777654322111
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 647 GQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 647 ~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
.......+..++..||... |..|.|+.++..+|..
T Consensus 226 ------~~~~~~~~~~~i~~~l~~~----p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 226 ------PAKCPQEIYKIMLECWAAE----PEDRPSFKALREELDN 260 (261)
T ss_pred ------CCCCCHHHHHHHHHHcCCC----chhCcCHHHHHHHHhc
Confidence 1123456778888888654 7789999998877753
No 205
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.98 E-value=4.7e-31 Score=272.65 Aligned_cols=250 Identities=24% Similarity=0.325 Sum_probs=196.9
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..++|++.+.||.|++|.||+|.+..+ ..+|+|.+.........+.+|+.+++.+. ||||+++++++. ....
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~-~~~~ 75 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLR------HDKLVPLYAVVS-EEPI 75 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCC------CCCeeeEEEEEc-CCCc
Confidence 457899999999999999999987554 46999998765555567788999888874 789999999875 4668
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+.+ +|.+++..... ..+++..+..++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||.+
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~--~~~~~l~dfg~~ 149 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEGDG----KYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGD--NLVCKIADFGLA 149 (260)
T ss_pred EEEEEcCCCCCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCeEEECCCccc
Confidence 999999985 78777754321 23788999999999999999999999999999999999985 788999999998
Q ss_pred cccccccc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 571 CFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 571 ~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
........ ...++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+....+......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 225 (260)
T cd05069 150 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCP---- 225 (260)
T ss_pred eEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----
Confidence 75433221 1234567999999998889999999999999999999 99999988777766665443211100
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
-.....+..++..||.. .|..|++++++..+|..
T Consensus 226 --------~~~~~~~~~li~~~l~~----~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 226 --------QGCPESLHELMKLCWKK----DPDERPTFEYIQSFLED 259 (260)
T ss_pred --------cccCHHHHHHHHHHccC----CcccCcCHHHHHHHHhc
Confidence 01234567777777774 48889999998877753
No 206
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.97 E-value=3.2e-31 Score=273.82 Aligned_cols=244 Identities=20% Similarity=0.308 Sum_probs=194.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
++|++.+.||+|+||.||++.+. .+..+|+|.+.......+.+.+|+.+++.+ +||||+++++++......++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKL------SHEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcC------CCCCeeeEEEEEccCCCcEE
Confidence 57999999999999999999864 345699999886544456678888888776 47899999999998889999
Q ss_pred EEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
||||+.+ +|.+++..... .+++..++.++.||+.||.|||+.|++|+||||+||+++. ++.+||+|||.+..
T Consensus 77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~d~g~~~~ 149 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD--QGCVKVSDFGLSRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCCEEECCCcccee
Confidence 9999974 57666653322 2889999999999999999999999999999999999985 78899999998865
Q ss_pred cccccc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 573 QTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 573 ~~~~~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+......+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----- 224 (256)
T cd05113 150 VLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPH----- 224 (256)
T ss_pred cCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCC-----
Confidence 433211 1234567999999998889999999999999999999 999998877777666665443322111
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
.....+..++..||... |..|.+++++..
T Consensus 225 -------~~~~~~~~li~~cl~~~----p~~Rp~~~~ll~ 253 (256)
T cd05113 225 -------LASEKVYAIMYSCWHEK----AEERPTFQQLLS 253 (256)
T ss_pred -------CCCHHHHHHHHHHcCCC----cccCCCHHHHHH
Confidence 12357788888898655 778888887763
No 207
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.5e-31 Score=279.93 Aligned_cols=256 Identities=23% Similarity=0.344 Sum_probs=197.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
.+|++++.||+|+||.||++.+..+++.||+|.++.. ......+.+|+.+++.++ ||||+++++.+......
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV------SPYIVDFYGAFFIEGAV 74 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcC------CCcHHhhhhheecCCeE
Confidence 3689999999999999999999989999999988753 233456778888888764 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEeeCCC
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
++||||+.+ +|..++.... ....+++..+..++.||+.||.|||+ .+|+|+||||+||+++. ++.++|+|||.
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~ 149 (286)
T cd06622 75 YMCMEYMDAGSLDKLYAGGV---ATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG--NGQVKLCDFGV 149 (286)
T ss_pred EEEEeecCCCCHHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC--CCCEEEeecCC
Confidence 999999986 4555544321 11238999999999999999999997 59999999999999995 78899999999
Q ss_pred ccccccc-cccccccCCCCCchhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 570 SCFQTDN-LCLYVQSRSYRAPEVIIGL------PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 570 a~~~~~~-~~~~~gt~~Y~APE~l~~~------~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
+...... .....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||...........+.......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd06622 150 SGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPT 229 (286)
T ss_pred cccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCC
Confidence 8654332 3335678899999998654 35789999999999999999999998766555444443332222211
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.. -.....+..++..||.. .|..|.+++++. +|+....
T Consensus 230 ~~---------~~~~~~~~~li~~~l~~----~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 230 LP---------SGYSDDAQDFVAKCLNK----IPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred CC---------cccCHHHHHHHHHHccc----CcccCCCHHHHhcChhhhhcc
Confidence 10 01234666777777754 588899999988 8886543
No 208
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=7.1e-31 Score=269.67 Aligned_cols=247 Identities=21% Similarity=0.282 Sum_probs=193.1
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-Ce
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-EH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~-~~ 490 (697)
+|++.+.||.|++|.||++.+..+++.||+|.+.... .....+.+|+.+++.++ |+|++++++.+... ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK------HPNIVAYRESWEGEDGL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCC------CCCeeeeeeeecCCCCE
Confidence 4899999999999999999999999999999987532 23345667777777764 78999999988643 46
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
+++||||+++ +|.+.+..... ..+++..+..++.|++.||.+||++||+|+||||+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~--~~~~~l~df~~ 148 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR--TNIIKVGDLGI 148 (257)
T ss_pred EEEEecccCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEec--CCcEEEecccc
Confidence 8999999974 66666653221 23789999999999999999999999999999999999984 78899999999
Q ss_pred ccccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 570 SCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 570 a~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
+...... .....+++.|+|||++.+..++.++|+|||||++++|++|+.||...+.......+.....+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---- 224 (257)
T cd08223 149 ARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPK---- 224 (257)
T ss_pred eEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCcc----
Confidence 8654322 233467889999999999889999999999999999999999998877766665554432211110
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 647 GQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 647 ~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.....+..++..||.. .|..|.+++++. +|+
T Consensus 225 --------~~~~~~~~li~~~l~~----~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 225 --------DYSPELGELIATMLSK----RPEKRPSVKSILRQPYI 257 (257)
T ss_pred --------ccCHHHHHHHHHHhcc----CcccCCCHHHHhcCCCC
Confidence 1123455566666554 488999999988 765
No 209
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-32 Score=299.08 Aligned_cols=253 Identities=24% Similarity=0.291 Sum_probs=205.9
Q ss_pred CceecCceEEEEEeccCCCCceEEEEECCCC----cEEEEEEEec----chhhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 005415 409 NTVIAGRYYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480 (697)
Q Consensus 409 ~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g----~~VAVKii~~----~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~ 480 (697)
+++...+-.+.++||+|+||.||+|..+..+ ..||+|..+. .......++.|.++++.++ |||||+
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~------H~NVVr 225 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN------HPNVVR 225 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC------CCCEEE
Confidence 4555666777799999999999999865432 2389999884 2455678889999999875 889999
Q ss_pred EEEEEEecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc
Q 005415 481 LYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 559 (697)
Q Consensus 481 l~~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~ 559 (697)
+||+......++||||+|. |+|.++++..... ++..+...++.+.+.||+|||+++++||||-.+|+|+.. +
T Consensus 226 ~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~-----v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~--~ 298 (474)
T KOG0194|consen 226 FYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKS-----LPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK--K 298 (474)
T ss_pred EEEEEcCCCccEEEEEecCCCcHHHHHHhCCCC-----CCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC--C
Confidence 9999999999999999997 4788888766542 889999999999999999999999999999999999995 6
Q ss_pred ceEEEeeCCCccccccccc---cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHH-
Q 005415 560 CEIKIIDLGSSCFQTDNLC---LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIG- 634 (697)
Q Consensus 560 ~~vKL~DFGla~~~~~~~~---~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~- 634 (697)
+.+||+|||+++....... ...-+..|+|||.+....|+.++|||||||++||+.+ |..||++....++.++|+.
T Consensus 299 ~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~ 378 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKN 378 (474)
T ss_pred CeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhc
Confidence 7789999999876542111 1124578999999999999999999999999999999 8999999999999999844
Q ss_pred hhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 635 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 635 ~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
....+.+ ...+..+..++..||... +..|.++.++..|+.
T Consensus 379 ~~r~~~~------------~~~p~~~~~~~~~c~~~~----p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 379 GYRMPIP------------SKTPKELAKVMKQCWKKD----PEDRPTMSTIKKKLE 418 (474)
T ss_pred CccCCCC------------CCCHHHHHHHHHHhccCC----hhhccCHHHHHHHHH
Confidence 3222222 144567888999999876 777888877775554
No 210
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-32 Score=278.83 Aligned_cols=257 Identities=26% Similarity=0.360 Sum_probs=205.3
Q ss_pred CceEEE-EEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVT-EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~-e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+-|++. +.||+|+++.|--+....+|..+|||++.+.. ..+.+..+|++++..++ +|+||++|+++|++++..
T Consensus 77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq-----gh~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ-----GHKNILQLIEFFEDDTRF 151 (463)
T ss_pred HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc-----CCccHHHHHHHhcccceE
Confidence 345554 68999999999999999999999999997643 44578899999999986 589999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc-cCcceEEEeeCCC
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS-YQRCEIKIIDLGS 569 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~-~~~~~vKL~DFGl 569 (697)
|||||-|.| .|+..+..... |++.++.+++++|+.||.|||.+||.||||||+|||... +.-.-+||+||.+
T Consensus 152 YLVfEKm~GGplLshI~~~~~------F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKRKH------FNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred EEEEecccCchHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccc
Confidence 999999975 56666654443 999999999999999999999999999999999999864 2234689999987
Q ss_pred cccc----------ccccccccccCCCCCchhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc----------
Q 005415 570 SCFQ----------TDNLCLYVQSRSYRAPEVII-----GLPYDQKIDLWSLGCILAELWTGEVLFPNDA---------- 624 (697)
Q Consensus 570 a~~~----------~~~~~~~~gt~~Y~APE~l~-----~~~~s~ksDIWSLGviL~ELltG~~PF~~~~---------- 624 (697)
..-. +....+.+|+..|||||+.. ...|+.++|.||||||||-||+|.+||.|.=
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe 305 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGE 305 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCC
Confidence 6432 12334568888999999873 2358999999999999999999999997641
Q ss_pred -----HHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 625 -----VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 625 -----~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
...++..|.+..-.+|...| ..+.....+...+++...+..|+++.+.. ||.....+
T Consensus 306 ~Cr~CQ~~LFesIQEGkYeFPdkdW-------------ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ 369 (463)
T KOG0607|consen 306 VCRVCQNKLFESIQEGKYEFPDKDW-------------AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP 369 (463)
T ss_pred ccHHHHHHHHHHHhccCCcCChhhh-------------HHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence 23455556555555555333 24445667777888888888899998888 89886554
No 211
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-33 Score=320.46 Aligned_cols=255 Identities=24% Similarity=0.345 Sum_probs=206.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
..+|.|+++||+|+||.|.+++.+.+++.||+|++++- ......+..|..||...+ .+.|++++-.|++.
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n------s~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN------SEWIVQLHYAFQDE 147 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC------cHHHHHHHHHhcCc
Confidence 46899999999999999999999999999999999761 233456777888876654 35899999999999
Q ss_pred CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
.++|+||||++ |+|..++.... .+++.-++.++..|+.||.-||+.|+|||||||+||||+. .|+|||+||
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLADF 219 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLADF 219 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeeccc
Confidence 99999999997 56777765443 2889999999999999999999999999999999999995 999999999
Q ss_pred CCccccccc----cccccccCCCCCchhhc----C-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhh--
Q 005415 568 GSSCFQTDN----LCLYVQSRSYRAPEVII----G-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML-- 636 (697)
Q Consensus 568 Gla~~~~~~----~~~~~gt~~Y~APE~l~----~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~l-- 636 (697)
|.+..+... ....+|||.|++||++. + +.|+..+|.|||||++|||+.|..||..++..+.+.+|+.-.
T Consensus 220 GsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~ 299 (1317)
T KOG0612|consen 220 GSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES 299 (1317)
T ss_pred hhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh
Confidence 998776533 23468999999999995 3 458999999999999999999999999999999999998652
Q ss_pred CCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccC---HHHHH--HhhcccCCCCC
Q 005415 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLT---LEYAA--LWLFGIDQNKI 697 (697)
Q Consensus 637 g~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t---~e~~~--~wl~~~~~n~~ 697 (697)
-.+|.+. +...-.+ .....|..-+..|+. +|+.. ||..+++|+.|
T Consensus 300 l~FP~~~---------------~VSeeak-dLI~~ll~~~e~RLgrngiedik~HpFF~g~~W~~i 349 (1317)
T KOG0612|consen 300 LSFPDET---------------DVSEEAK-DLIEALLCDREVRLGRNGIEDIKNHPFFEGIDWDNI 349 (1317)
T ss_pred cCCCccc---------------ccCHHHH-HHHHHHhcChhhhcccccHHHHHhCccccCCChhhh
Confidence 2233111 1111112 223334444566777 89988 99999999765
No 212
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=7.6e-31 Score=269.58 Aligned_cols=247 Identities=22% Similarity=0.327 Sum_probs=200.1
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++.+.||+|+||.||++.+..+++.||+|.+... ......+.+|+.+++.++ ||||+++++++....+.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK------HPNIVQYQESFEENGNL 74 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCC------CCCeeeeEeeecCCCeE
Confidence 699999999999999999999999999999998743 233456778888888774 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+.+ +|.+.+..... ..+++..+..++.|++.||.|||+++++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~--~~~~~l~d~~~~ 148 (256)
T cd08218 75 YIVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK--DGTIKLGDFGIA 148 (256)
T ss_pred EEEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEEeeccce
Confidence 999999974 67666653222 12788899999999999999999999999999999999985 778999999998
Q ss_pred ccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
....... ....+++.|+|||++.+..++.++|+|||||++++|++|..||...+..+.+..++....++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~------- 221 (256)
T cd08218 149 RVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV------- 221 (256)
T ss_pred eecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC-------
Confidence 6654322 224578889999999988899999999999999999999999988877777766643221111
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.......+..++..||.. .|..|+++.+++ +|+
T Consensus 222 -----~~~~~~~~~~li~~~l~~----~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 222 -----SSHYSYDLRNLVSQLFKR----NPRDRPSVNSILEKNFI 256 (256)
T ss_pred -----cccCCHHHHHHHHHHhhC----ChhhCcCHHHHhhCcCC
Confidence 112244677888888764 588999999988 775
No 213
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=2.7e-31 Score=277.47 Aligned_cols=259 Identities=25% Similarity=0.396 Sum_probs=200.1
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++|++.++||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.++ ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 74 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR------HENLVNLIEVFRRKKR 74 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcC------CcchhhHHHhcccCCe
Confidence 47999999999999999999998899999999876432 22345677888888764 7899999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
.++||||+.++++..+..... .+++..++.++.||+.||.|||+.+|+|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~--~~~~~l~dfg~~ 147 (286)
T cd07846 75 LYLVFEFVDHTVLDDLEKYPN-----GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ--SGVVKLCDFGFA 147 (286)
T ss_pred EEEEEecCCccHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCcEEEEeeeee
Confidence 999999999876654432221 2789999999999999999999999999999999999985 788999999998
Q ss_pred cccccc---cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
...... .....++..|+|||.+.+. .++.++||||||+++|+|++|.+||......+.+..+....+.........
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07846 148 RTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEI 227 (286)
T ss_pred eeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHH
Confidence 654322 2234578889999998764 478899999999999999999999998888888888877766654432211
Q ss_pred ccc--------ccc----------cccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 647 GQE--------IYK----------YFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 647 ~~~--------~~~----------~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
... ... .-.-...+..++..||.. .|..|.++++++ +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~----~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 228 FQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRI----DPDDRPSSSQLLHHEFF 286 (286)
T ss_pred hccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcC----CcccchhHHHHhcCCCC
Confidence 000 000 001123455666666643 488899998887 663
No 214
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.1e-30 Score=276.36 Aligned_cols=251 Identities=25% Similarity=0.363 Sum_probs=196.7
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..+|++.+.||+|++|.||+|.+..+++.|++|.+.... .....+.+|+.+++.+. |+||+++++.+......
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~------h~~v~~~~~~~~~~~~~ 92 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK------NPNIVNYLDSYLVGDEL 92 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCC------CCCEeeEEEEEEeCCEE
Confidence 368999999999999999999999999999999987533 23356677888887664 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+.+ +|.+++... .+++..+..++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||++
T Consensus 93 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~--~~~~kl~dfg~~ 163 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 163 (296)
T ss_pred EEeecccCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC--CCCEEECccccc
Confidence 999999975 566665321 2788899999999999999999999999999999999985 778999999988
Q ss_pred cccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... .....+++.|+|||.+.+..++.++|||||||++|+|++|+.||........+..+.. .+.++...
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~---- 238 (296)
T cd06654 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQN---- 238 (296)
T ss_pred hhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCCCCCCC----
Confidence 654322 2234678899999999988899999999999999999999999988776554433322 11111100
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
...-...+..++..||. ..|..|.++++++ +|+...
T Consensus 239 -----~~~~~~~l~~li~~~l~----~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 239 -----PEKLSAIFRDFLNRCLD----MDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred -----ccccCHHHHHHHHHHCc----CCcccCcCHHHHhhChhhhcc
Confidence 00112345566666664 4488899999998 888754
No 215
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=303.87 Aligned_cols=206 Identities=27% Similarity=0.363 Sum_probs=174.4
Q ss_pred eCceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 408 ~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
+...-.+-|...+.||+|+||.||+++++.+|+.||||.+++. ....+...+|++++++++ |+|||+++++-
T Consensus 7 l~~~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn------h~NIVk~f~ie 80 (732)
T KOG4250|consen 7 LTSGENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN------HPNIVKLFDIE 80 (732)
T ss_pred cccCCCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC------chhhhhhcccC
Confidence 3333446788889999999999999999999999999999863 345678889999999996 78999999987
Q ss_pred EecC------eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC
Q 005415 486 YHLE------HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (697)
Q Consensus 486 ~~~~------~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~ 558 (697)
.... ...+|||||. |+|+..+.......+ +++.+++.++.++..||.|||++|||||||||.||++-...
T Consensus 81 e~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~G---LpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge 157 (732)
T KOG4250|consen 81 ETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYG---LPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE 157 (732)
T ss_pred CccccCcccccceEEEeecCCCcHHHHhcCcccccC---CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC
Confidence 6543 5789999997 567766655443333 99999999999999999999999999999999999987543
Q ss_pred cc--eEEEeeCCCccccccc--cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005415 559 RC--EIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPN 622 (697)
Q Consensus 559 ~~--~vKL~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~ 622 (697)
+| ..||+|||.|+...+. ....+||+.|.+||++.. +.|+..+|.|||||++|+++||..||..
T Consensus 158 dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 158 DGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred CCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 33 5699999999887654 456899999999999984 7899999999999999999999999954
No 216
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=2e-31 Score=277.92 Aligned_cols=259 Identities=29% Similarity=0.442 Sum_probs=205.5
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhh--hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~--~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
|++.+.||.|++|+||+|.+..+++.|+||.+...... .....+|+..++.+. +|+||+++++++......++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----EHPNIVKLKEVFRENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc-----CCCCchhHHHHhhcCCcEEE
Confidence 67899999999999999999888999999998754221 123345666665553 38899999999999999999
Q ss_pred EEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 494 VCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 494 VmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
||||+++++.+.+..... ..+++..+..++.|++.+|.|||+++++|+||+|+||+++. ++.++|+|||.+...
T Consensus 76 v~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~--~~~~~l~d~~~~~~~ 149 (283)
T cd07830 76 VFEYMEGNLYQLMKDRKG----KPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG--PEVVKIADFGLAREI 149 (283)
T ss_pred EEecCCCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC--CCCEEEeecccceec
Confidence 999998888887765431 22789999999999999999999999999999999999995 889999999998765
Q ss_pred ccc--cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 574 TDN--LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 574 ~~~--~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
... .....++..|+|||++.+ ..++.++|+||||+++++|++|++||+..+..+.+.++...++.++...+..+...
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 150 RSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred cCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 432 233567888999998854 45789999999999999999999999999999999999999988877655433221
Q ss_pred cccc-----------------cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 651 YKYF-----------------TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 651 ~~~~-----------------~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
...+ .....+..+++.||. ..|..|.|+++++ +|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~----~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLR----WDPKKRPTASQALQHPYF 283 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcc----cCcccCCCHHHHhhCCCC
Confidence 1111 112445566666665 3488899999988 764
No 217
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=7.2e-31 Score=270.04 Aligned_cols=248 Identities=25% Similarity=0.321 Sum_probs=194.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
++|++.+.||.|+||.||+|.+..+++.+++|++.... .....+.+|+.+++.++ ||||+++++++.....++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~ 76 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR------HPNIVAYFGSYLRRDKLW 76 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCC------CCChhceEEEEEeCCEEE
Confidence 67999999999999999999998899999999988543 33466778888887764 889999999999999999
Q ss_pred EEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++|||+++ +|.+++..... .+++..+..++.|++.||.|||+++|+|+||+|+||+++. ++.++|+|||.+.
T Consensus 77 l~~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~ 149 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTRG-----PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE--DGDVKLADFGVSA 149 (262)
T ss_pred EEEeCCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC--CCCEEECccccch
Confidence 99999986 55555543311 2889999999999999999999999999999999999995 7889999999987
Q ss_pred ccccc---cccccccCCCCCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~---~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
..... .....++..|+|||.+.+. .++.++|+|||||++|+|++|.+||...+.......+...--+++. ..
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~- 227 (262)
T cd06613 150 QLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK-LK- 227 (262)
T ss_pred hhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc-cc-
Confidence 64432 2334678889999999877 7889999999999999999999999887766555444322111111 00
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
. .......+..+++.||... |..|.+++++.
T Consensus 228 ~------~~~~~~~~~~li~~~l~~~----p~~Rpt~~~il 258 (262)
T cd06613 228 D------KEKWSPVFHDFIKKCLTKD----PKKRPTATKLL 258 (262)
T ss_pred c------hhhhhHHHHHHHHHHcCCC----hhhCCCHHHHh
Confidence 0 0011235667777777643 77889988876
No 218
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.97 E-value=2.6e-31 Score=291.35 Aligned_cols=253 Identities=22% Similarity=0.282 Sum_probs=192.5
Q ss_pred cCceEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d-----~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
.++|++.+.||+|+||.||+|.+ ..++..||||+++... .....+.+|+.+++.+. +||||+++++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~-----~HpnIv~l~~~~ 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHINIVNLLGAC 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc-----CCcceeeeeeee
Confidence 46899999999999999999974 3457789999987532 23456778999998874 389999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhcc----------------------------------------------------
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQES---------------------------------------------------- 512 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~~---------------------------------------------------- 512 (697)
......++||||+. |+|.+++......
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999997 5677776542210
Q ss_pred -----------------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccc
Q 005415 513 -----------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 513 -----------------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~ 575 (697)
.....+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRN 266 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccC
Confidence 01124778889999999999999999999999999999999984 77899999999875443
Q ss_pred ccc-----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccc
Q 005415 576 NLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (697)
Q Consensus 576 ~~~-----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~ 649 (697)
... ...++..|+|||++.+..++.++|||||||++|+|++ |..||........+.+++.....+..
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-------- 338 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLS-------- 338 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCC--------
Confidence 221 1233567999999999999999999999999999998 99999876544433333221111100
Q ss_pred ccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 650 IYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 650 ~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
. -.....+..++..||... |..|+++.+++.
T Consensus 339 -~--~~~~~~l~~li~~cl~~d----P~~RPs~~eil~ 369 (375)
T cd05104 339 -P--ECAPSEMYDIMKSCWDAD----PLKRPTFKQIVQ 369 (375)
T ss_pred -C--CCCCHHHHHHHHHHccCC----hhHCcCHHHHHH
Confidence 0 012346778888888755 778888888773
No 219
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.3e-32 Score=293.38 Aligned_cols=197 Identities=23% Similarity=0.362 Sum_probs=167.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhh-hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC-eE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE-HL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~-~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~-~l 491 (697)
+.|.-...||+|+||.||+|. ..++..||||.+...... ..++..|+.++..++ |||+|+|+|||.+.+ +.
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~-l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~------H~Nlv~LlGyC~e~~~~~ 147 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGV-LSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLR------HPNLVKLLGYCLEGGEHR 147 (361)
T ss_pred hCCchhcceecCCCeEEEEEE-ECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCC------CcCcccEEEEEecCCceE
Confidence 456666789999999999998 456699999988765543 456999999998885 789999999999988 59
Q ss_pred EEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcC---ccccCCCCccccccccCcceEEEeeC
Q 005415 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG---IIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 492 ~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~g---IvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
+||+||+. |+|.+.+...... .++|..+..|+.++|+||+|||+.. ||||||||+|||++. +..+||+||
T Consensus 148 ~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~--~~~aKlsDF 221 (361)
T KOG1187|consen 148 LLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE--DFNAKLSDF 221 (361)
T ss_pred EEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC--CCCEEccCc
Confidence 99999998 5777766543321 4899999999999999999999853 999999999999995 899999999
Q ss_pred CCcccccc-cccc--c-cccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005415 568 GSSCFQTD-NLCL--Y-VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND 623 (697)
Q Consensus 568 Gla~~~~~-~~~~--~-~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~ 623 (697)
|+|+.... .... . .||.+|+|||++..+..+.|+|||||||+|+||+||+.|....
T Consensus 222 GLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 222 GLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred cCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 99976654 3222 2 7999999999999888999999999999999999999888653
No 220
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=5.7e-31 Score=272.44 Aligned_cols=251 Identities=19% Similarity=0.227 Sum_probs=191.8
Q ss_pred eEEEEEeccCCCCceEEEEECCC---CcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~---g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
|++.+.||+|+||.||+|.+..+ +..||+|+++... .....+.+|+.+++.++ ||||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD------HPNVMKLIGVCFEAS 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCC------CCCeeeEEeeeccCC
Confidence 57889999999999999987543 4789999987542 23456777888887764 789999999887654
Q ss_pred e------EEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 490 H------LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 490 ~------l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
. .++||||+. ++|..++...........+++..+..++.|++.||.|||+++|+||||||+||+++. ++.+
T Consensus 75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~ 152 (273)
T cd05035 75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE--DMTV 152 (273)
T ss_pred ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC--CCeE
Confidence 4 799999997 466666644332222334889999999999999999999999999999999999985 7889
Q ss_pred EEeeCCCccccccccc-----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhh
Q 005415 563 KIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 563 KL~DFGla~~~~~~~~-----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~l 636 (697)
||+|||++........ ....+..|+|||.+.+..++.++|||||||++|||++ |..||.+....+.+..+....
T Consensus 153 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05035 153 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN 232 (273)
T ss_pred EECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999876433221 1234567999999988889999999999999999999 999999888777666654321
Q ss_pred CCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 637 g~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
... ........+..++..||... |..|+++.++...|.
T Consensus 233 ~~~------------~~~~~~~~~~~li~~~l~~~----p~~Rp~~~e~~~~l~ 270 (273)
T cd05035 233 RLK------------QPEDCLDELYDLMYSCWRAD----PKDRPTFTKLREVLE 270 (273)
T ss_pred CCC------------CCcCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHHHH
Confidence 110 01123346667777776644 778889988886654
No 221
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=4.7e-31 Score=280.06 Aligned_cols=252 Identities=21% Similarity=0.293 Sum_probs=199.5
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
....+|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.++ ||||+++++++.
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~niv~~~~~~~ 85 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR------HPNTIEYKGCYL 85 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC------CCCEEEEEEEEE
Confidence 34567999999999999999999998899999999986422 23345677888887764 789999999999
Q ss_pred ecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 487 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 487 ~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
.....++||||+.+++.+++..... .+++..+..++.|++.||.|||+.+|+|+||+|+||+++. ++.++|+|
T Consensus 86 ~~~~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~--~~~~kL~d 158 (307)
T cd06607 86 REHTAWLVMEYCLGSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE--PGTVKLAD 158 (307)
T ss_pred eCCeEEEEHHhhCCCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC--CCCEEEee
Confidence 9999999999999988877754332 2889999999999999999999999999999999999985 78899999
Q ss_pred CCCccccccccccccccCCCCCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 567 LGSSCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 567 FGla~~~~~~~~~~~gt~~Y~APE~l~---~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
||++...... ....+++.|+|||++. ...++.++||||||+++|+|++|.+||.+.+....+..+.... ++...
T Consensus 159 fg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~- 235 (307)
T cd06607 159 FGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-SPTLS- 235 (307)
T ss_pred cCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCC-CCCCC-
Confidence 9998655433 3356788999999874 3458889999999999999999999998877666555443211 11100
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
. ......+..++..||... |..|.+++++. +|+..
T Consensus 236 -------~--~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 236 -------S--NDWSDYFRNFVDSCLQKI----PQDRPSSEELLKHRFVLR 272 (307)
T ss_pred -------c--hhhCHHHHHHHHHHhcCC----hhhCcCHHHHhcChhhcc
Confidence 0 012235677777777655 77888998887 88764
No 222
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=3.8e-31 Score=274.42 Aligned_cols=242 Identities=27% Similarity=0.372 Sum_probs=189.7
Q ss_pred EEEEEeccCCCCceEEEEEC----CCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 417 YVTEYLGSAAFSKVFQAQDL----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 417 ~i~e~LG~G~fG~Vy~a~d~----~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
.+.+.||.|+||.||+|.+. ..+..|+||+++.. ......+.+|+++++.++ ||||+++++++.....
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~g~~~~~~~ 75 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLR------HPNIVKLYGFCIENEP 75 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHS------BTTBE-EEEEEESSSS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccc------cccccccccccccccc
Confidence 56889999999999999987 45688999999653 233577888888888874 7899999999998888
Q ss_pred EEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.++||||+. ++|.+++..... ..+++..+..|+.||+.||.|||+++|+|++|+++||+++. ++.+||+|||+
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~--~~~~Kl~~f~~ 149 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSKNK----EPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS--NGQVKLSDFGL 149 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHTCT----TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET--TTEEEEESTTT
T ss_pred cccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccc--ccccccccccc
Confidence 999999997 678888876511 22889999999999999999999999999999999999995 78999999999
Q ss_pred ccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 570 SCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 570 a~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
+...... .........|+|||.+.+..++.++||||||+++|||++ |+.||...+..+.+..+.+....+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~---- 225 (259)
T PF07714_consen 150 SRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP---- 225 (259)
T ss_dssp GEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT----
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce----
Confidence 8765221 122345677999999998889999999999999999999 789999888888777763322211
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
..-.....++.++..||... |..|++++++.
T Consensus 226 --------~~~~~~~~~~~li~~C~~~~----p~~RPs~~~i~ 256 (259)
T PF07714_consen 226 --------IPDNCPKDIYSLIQQCWSHD----PEKRPSFQEIL 256 (259)
T ss_dssp --------SBTTSBHHHHHHHHHHT-SS----GGGS--HHHHH
T ss_pred --------eccchhHHHHHHHHHHcCCC----hhhCcCHHHHH
Confidence 11124567889999999977 77888887765
No 223
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=8.9e-31 Score=268.44 Aligned_cols=248 Identities=26% Similarity=0.293 Sum_probs=199.1
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++.+.||+|++|.||+|.+..+++.+|||.+... ......+.+|+.+++.++ ||||+++++.+......
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS------HPNIIEYYENFLEDKAL 74 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCC------CCchhheeeeEecCCEE
Confidence 589999999999999999999999999999998753 233456777888888774 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+++ +|.+++..... ..+++..+..++.|++.||.|||++||+|+||+|+||+++. +++.++|+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-~~~~~~l~d~~~~ 149 (256)
T cd08220 75 MIVMEYAPGGTLAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK-HKMVVKIGDFGIS 149 (256)
T ss_pred EEEEecCCCCCHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEEccCCCc
Confidence 999999975 67777654321 22788999999999999999999999999999999999975 3557899999998
Q ss_pred ccccccc--ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 571 CFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 571 ~~~~~~~--~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
....... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||.+.+......++......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 222 (256)
T cd08220 150 KILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPIS------- 222 (256)
T ss_pred eecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCC-------
Confidence 7654332 2346788999999999888899999999999999999999999887776666555432211100
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
......+..++..||... |..|.|+++++ +|+
T Consensus 223 -----~~~~~~l~~li~~~l~~~----p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 223 -----DRYSPDLRQLILSMLNLD----PSKRPQLSQIMAQPIC 256 (256)
T ss_pred -----CCcCHHHHHHHHHHccCC----hhhCCCHHHHhhCCCC
Confidence 012346778888888644 88899999988 664
No 224
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=8.1e-31 Score=268.73 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=197.6
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
++|++.+.||.|+||.||+|.+..+++.|++|.+..... ...+.+|+.+++.+ +||||+++++++......++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC------DSPYIVKYYGSYFKNTDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC------CCCcEeeeeeeeecCCcEEE
Confidence 579999999999999999999988899999999986544 56788899988887 48899999999999999999
Q ss_pred EEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
++||+.+ +|.+++.... ..+++..++.++.|++.||.|||+.+|+|+||+|+||+++. ++.++|+|||++..
T Consensus 76 ~~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~--~~~~~l~dfg~~~~ 148 (256)
T cd06612 76 VMEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE--EGQAKLADFGVSGQ 148 (256)
T ss_pred EEecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC--CCcEEEcccccchh
Confidence 9999985 5666654322 22889999999999999999999999999999999999995 77899999999876
Q ss_pred ccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccc
Q 005415 573 QTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (697)
Q Consensus 573 ~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~ 649 (697)
..... ....++..|+|||++.+..++.++||||||+++|+|++|+.||...........+.... +..+ .
T Consensus 149 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~-~---- 220 (256)
T cd06612 149 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP---PPTL-S---- 220 (256)
T ss_pred cccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC---CCCC-C----
Confidence 54332 23457889999999999899999999999999999999999998766554333321110 0000 0
Q ss_pred ccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 650 IYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 650 ~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
... .....+..++..||.. .|..|.++++++ +|+
T Consensus 221 ~~~--~~~~~~~~~i~~~l~~----~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 221 DPE--KWSPEFNDFVKKCLVK----DPEERPSAIQLLQHPFI 256 (256)
T ss_pred chh--hcCHHHHHHHHHHHhc----ChhhCcCHHHHhcCCCC
Confidence 000 1123566777777765 488899999998 775
No 225
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=1.9e-31 Score=275.13 Aligned_cols=253 Identities=28% Similarity=0.343 Sum_probs=199.1
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.+.||.|++|.||++.+..+++.||+|.+.... ....++.+|+++++.+. ||||+++++.+......
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN------SPYIVGFYGAFYNNGDI 74 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC------CCchhhhheeeecCCEE
Confidence 36788899999999999999999999999999987642 33456677888877764 78999999999999999
Q ss_pred EEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEeeCCC
Q 005415 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 492 ~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
++|+||+. ++|.+++.... ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++. ++.++|+|||.
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~--~~~~~l~d~g~ 147 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS--RGQIKLCDFGV 147 (265)
T ss_pred EEEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC--CCCEEEeeccc
Confidence 99999998 67777765432 238889999999999999999999 99999999999999995 78899999998
Q ss_pred ccccccc-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHHhhCCCCHHH
Q 005415 570 SCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA-----VVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 570 a~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~-----~~e~l~~I~~~lg~~p~e~ 643 (697)
+...... .....++..|+|||.+.+..++.++||||||+++|+|++|..||.... ..+.+..+... .+...
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~ 224 (265)
T cd06605 148 SGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE---PPPRL 224 (265)
T ss_pred chhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC---CCCCC
Confidence 8654322 122567889999999999899999999999999999999999997542 22333333221 11100
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
. ... ....+..++..||... |..|+|+++++ +|++.+++
T Consensus 225 ~------~~~--~~~~~~~li~~~l~~~----p~~Rpt~~~ll~~~~~~~~~~ 265 (265)
T cd06605 225 P------SGK--FSPDFQDFVNLCLIKD----PRERPSYKELLEHPFIKKYES 265 (265)
T ss_pred C------hhh--cCHHHHHHHHHHcCCC----chhCcCHHHHhhCchhhcccC
Confidence 0 000 2335666777776644 89999999999 99998874
No 226
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=4.3e-31 Score=274.66 Aligned_cols=257 Identities=30% Similarity=0.432 Sum_probs=209.5
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
|++.+.||+|++|.||+|.+..+++.||+|++... .........|+.+++.++ |+||+++++++......+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~~ 74 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK------HPNIVKLLDVIHTERKLY 74 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcC------CCCHHHHHhhhhcCCceE
Confidence 67788999999999999999999999999999864 333456677888888774 789999999999999999
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
+||||++++|.+++.... ..+++..+..++.|++.||.|||++||+||||+|+||+++. ++.++|+|||.+..
T Consensus 75 ~v~e~~~~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~--~~~~~l~d~g~~~~ 147 (282)
T cd07829 75 LVFEYCDMDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR--DGVLKLADFGLARA 147 (282)
T ss_pred EEecCcCcCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC--CCCEEEecCCcccc
Confidence 999999999888887543 12889999999999999999999999999999999999995 78899999999876
Q ss_pred ccccc---ccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 573 QTDNL---CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 573 ~~~~~---~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
..... ....++..|+|||.+.+. .++.++|+|||||++|+|++|.+||.+....+.+.++.+.++.+....+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07829 148 FGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVT 227 (282)
T ss_pred cCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhc
Confidence 54322 223456789999999776 78999999999999999999999999999999999999999988887765443
Q ss_pred ccc-------ccc---------cCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 649 EIY-------KYF---------TKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 649 ~~~-------~~~---------~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
... .+. .-...+..++..||. .-|..|+++++++ +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~----~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 228 KLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQ----YNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccccccccccccCccchHHhcccccHHHHHHHHHhhc----cCcccCCCHHHHhhCcCC
Confidence 332 000 012234445555554 4588999999998 885
No 227
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=9.6e-31 Score=269.44 Aligned_cols=247 Identities=20% Similarity=0.274 Sum_probs=195.5
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-ecCeEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLF 492 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~-~~~~l~ 492 (697)
.+|++.+.||+|+||.||++.. .+..||+|.++.... ...+.+|+.+++.++ |+|++++++++. .....+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT-AQAFLAEASVMTQLR------HSNLVQLLGVIVEEKGGLY 76 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCch-HHHHHHHHHHHHhCC------CCCeeeEEEEEEcCCCceE
Confidence 5799999999999999999975 478899999875543 356778888888774 789999999765 446789
Q ss_pred EEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||++ ++|.+++..... ..+++..+..++.|++.||.|||++||+||||||+||+++. ++.+||+|||++.
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~dfg~~~ 150 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSE--DNVAKVSDFGLTK 150 (256)
T ss_pred EEEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcC--CCcEEecCCccce
Confidence 9999997 577777654322 23788999999999999999999999999999999999985 7899999999987
Q ss_pred ccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 572 FQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 572 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
...........+..|+|||++.+..++.++|||||||++|+|++ |+.||......+....+.+...+..
T Consensus 151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------- 220 (256)
T cd05082 151 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA---------- 220 (256)
T ss_pred eccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC----------
Confidence 65544444455678999999998889999999999999999998 9999988777666655533211100
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
. -.....+..++..||.. .|..|.|++++..+|..
T Consensus 221 ~--~~~~~~~~~li~~~l~~----~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 221 P--DGCPPVVYDVMKQCWHL----DAATRPSFLQLREQLEH 255 (256)
T ss_pred C--CCCCHHHHHHHHHHhcC----ChhhCcCHHHHHHHHhc
Confidence 0 01235677777888774 48889999999877653
No 228
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97 E-value=9e-31 Score=273.09 Aligned_cols=253 Identities=17% Similarity=0.213 Sum_probs=192.4
Q ss_pred ceecCceEEEEEeccCCCCceEEEEECC-----CCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005415 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482 (697)
Q Consensus 410 ~~i~~rY~i~e~LG~G~fG~Vy~a~d~~-----~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~ 482 (697)
++..++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+++.++ ||||++++
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~iv~~~ 75 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN------CHHVVRLL 75 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCeeeEE
Confidence 3456789999999999999999998642 45789999986432 22345667887777664 78999999
Q ss_pred EEEEecCeEEEEEEccc-cchHHHHHhhhccC----CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc
Q 005415 483 DYFYHLEHLFIVCELLR-ANLYEFQKFNQESG----GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 557 (697)
Q Consensus 483 ~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~----~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~ 557 (697)
+++......++||||+. ++|.+++....... ....+++..+..++.|++.||.|||+.+++|+||||+||+++.
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~- 154 (277)
T cd05062 76 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE- 154 (277)
T ss_pred EEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC-
Confidence 99999999999999997 46766664322110 1123677888999999999999999999999999999999995
Q ss_pred CcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHH
Q 005415 558 QRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILAR 631 (697)
Q Consensus 558 ~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~ 631 (697)
++.++|+|||++....... ....+++.|+|||++.+..++.++|||||||++|||++ |..||.+....+.+..
T Consensus 155 -~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (277)
T cd05062 155 -DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRF 233 (277)
T ss_pred -CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 7889999999986543221 11234678999999998889999999999999999999 7999998877766665
Q ss_pred HHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 632 IIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 632 I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
+.....+... -.....+..++..||.. .|..|+++.+++
T Consensus 234 ~~~~~~~~~~------------~~~~~~~~~li~~~l~~----~p~~Rps~~e~l 272 (277)
T cd05062 234 VMEGGLLDKP------------DNCPDMLFELMRMCWQY----NPKMRPSFLEII 272 (277)
T ss_pred HHcCCcCCCC------------CCCCHHHHHHHHHHcCC----ChhhCcCHHHHH
Confidence 5432211110 01234566777777775 477888888876
No 229
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=7.8e-31 Score=277.52 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=194.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..+|++++.||+|++|.||++.+..+++.||+|.+.... .....+.+|+.+++.+ +|+||+++++++......
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN------KNPNIVNYLDSYLVGDEL 91 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC------CCCCEeeEEEEEecCCEE
Confidence 378999999999999999999999999999999987533 2334566788777765 488999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+++ +|.+++.. . .+++..+..++.|++.||.|||+.+|+||||||+|||++. ++.++|+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~-~------~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~--~~~~~l~Dfg~~ 162 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE-T------CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 162 (297)
T ss_pred EEeecccCCCCHHHHHHh-C------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEECcCccc
Confidence 999999975 55555432 1 2788899999999999999999999999999999999985 788999999988
Q ss_pred cccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+....+..+.. .+.++...
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~~~~---- 237 (297)
T cd06656 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPELQN---- 237 (297)
T ss_pred eEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCCCCC----
Confidence 654332 2234678899999999998899999999999999999999999987665443332211 12111100
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.......+..++..||. ..|..|.+++++. +|+..-.
T Consensus 238 -----~~~~~~~~~~li~~~l~----~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 238 -----PERLSAVFRDFLNRCLE----MDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred -----ccccCHHHHHHHHHHcc----CChhhCcCHHHHhcCchhcccc
Confidence 00112234445555544 4578899999999 8987543
No 230
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=7.4e-31 Score=272.84 Aligned_cols=256 Identities=20% Similarity=0.257 Sum_probs=197.5
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCC-----CcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~-----g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~ 483 (697)
+..++|++.+.||.|+||.||+|.+... +..||+|.+.... .....+.+|+.+++.+ +||||+++++
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~ 76 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF------NCHHVVRLLG 76 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC------CCCceeEEEE
Confidence 3457899999999999999999987643 4889999987543 2234566777777665 3789999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHHhhhcc----CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC
Q 005415 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQES----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (697)
Q Consensus 484 ~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~----~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~ 558 (697)
++......++||||+. ++|.+++...... .....+++..+..++.||+.||.|||+.+|+||||||+||+++.
T Consensus 77 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~-- 154 (277)
T cd05032 77 VVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE-- 154 (277)
T ss_pred EEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC--
Confidence 9999999999999997 5777776543211 11223678899999999999999999999999999999999995
Q ss_pred cceEEEeeCCCccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHH
Q 005415 559 RCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARI 632 (697)
Q Consensus 559 ~~~vKL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I 632 (697)
++.+||+|||+++..... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+....+
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 234 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFV 234 (277)
T ss_pred CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHH
Confidence 788999999998654322 122345678999999988889999999999999999998 99999988877766655
Q ss_pred HHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 633 IGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 633 ~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
... ..++. .......+..++..||... |..|.|++++..+|.
T Consensus 235 ~~~-~~~~~-----------~~~~~~~~~~li~~~l~~~----p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 235 IDG-GHLDL-----------PENCPDKLLELMRMCWQYN----PKMRPTFLEIVSSLK 276 (277)
T ss_pred hcC-CCCCC-----------CCCCCHHHHHHHHHHcCCC----hhhCCCHHHHHHHhc
Confidence 421 11110 0112456777778887655 888999999987664
No 231
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=1.6e-30 Score=273.19 Aligned_cols=254 Identities=23% Similarity=0.309 Sum_probs=196.4
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec----
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL---- 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~---- 488 (697)
.++|.+.+.||+|+||.||++.+..+++.+|+|++.........+.+|+.+++.+. +||||+++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-----~h~ni~~~~~~~~~~~~~~ 95 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP-----NHPNVVKFYGMFYKADKLV 95 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEEeccccC
Confidence 57899999999999999999999999999999999765444566778888888774 389999999998754
Q ss_pred -CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 489 -EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 489 -~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
...++||||+.+ +|.+++...... ...+++..++.++.|++.||.|||+.+|+|+||||+||+++. ++.++|+|
T Consensus 96 ~~~~~lv~ey~~~~sL~~~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~--~~~~kl~d 171 (291)
T cd06639 96 GGQLWLVLELCNGGSVTELVKGLLIC--GQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT--EGGVKLVD 171 (291)
T ss_pred CCeeEEEEEECCCCcHHHHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEee
Confidence 358999999975 666666532211 123789999999999999999999999999999999999985 77899999
Q ss_pred CCCccccccc---cccccccCCCCCchhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCC
Q 005415 567 LGSSCFQTDN---LCLYVQSRSYRAPEVIIGL-----PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 567 FGla~~~~~~---~~~~~gt~~Y~APE~l~~~-----~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
||++...... .....++..|+|||.+... .++.++|||||||++|+|++|++||........+..+....
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~-- 249 (291)
T cd06639 172 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP-- 249 (291)
T ss_pred cccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC--
Confidence 9998754322 2234678889999998643 36889999999999999999999998877665555543221
Q ss_pred CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 639 IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 639 ~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
+.... ..-.....+..++..||.. .|..|.++++++ +|+
T Consensus 250 -~~~~~-------~~~~~~~~l~~li~~~l~~----~p~~Rps~~~il~~~~~ 290 (291)
T cd06639 250 -PPTLL-------HPEKWCRSFNHFISQCLIK----DFEARPSVTHLLEHPFI 290 (291)
T ss_pred -CCCCC-------cccccCHHHHHHHHHHhhc----ChhhCcCHHHHhcCccc
Confidence 11110 0001123566777777765 488899999988 786
No 232
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=7.4e-31 Score=272.10 Aligned_cols=249 Identities=19% Similarity=0.234 Sum_probs=190.4
Q ss_pred EEEEEeccCCCCceEEEEECCCCc--EEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 005415 417 YVTEYLGSAAFSKVFQAQDLHTGV--DVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (697)
Q Consensus 417 ~i~e~LG~G~fG~Vy~a~d~~~g~--~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (697)
.+.+.||+|+||.||+|++..++. .||+|.++.. ......+..|+.+++.++ ||||+++++++...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~ 75 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD------HPNVMRLIGVCLQTVES 75 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEccCCcc
Confidence 467889999999999999877665 6999988753 333456777888887764 78999999987532
Q ss_pred ---CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEE
Q 005415 489 ---EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (697)
Q Consensus 489 ---~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL 564 (697)
...+++|||+. ++|..++...........+++..+..++.||+.||.|||+++|+||||||+|||++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl 153 (272)
T cd05075 76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE--NMNVCV 153 (272)
T ss_pred cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcC--CCCEEE
Confidence 35789999997 567666644332222334889999999999999999999999999999999999985 788999
Q ss_pred eeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCC
Q 005415 565 IDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 565 ~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
+|||++....... ....+++.|+|||.+.+..++.++|||||||++|+|++ |+.||.+....+....+...-..
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 233 (272)
T cd05075 154 ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL 233 (272)
T ss_pred CCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 9999987654321 12234678999999999889999999999999999999 89999987776666555432111
Q ss_pred CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 639 IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 639 ~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
+ ........+..++..||... |..|++++++..-|
T Consensus 234 ~------------~~~~~~~~~~~li~~~l~~~----p~~Rps~~~l~~~l 268 (272)
T cd05075 234 K------------QPPDCLDGLYSLMSSCWLLN----PKDRPSFETLRCEL 268 (272)
T ss_pred C------------CCCCCCHHHHHHHHHHcCCC----cccCcCHHHHHHHH
Confidence 1 11123346778888888755 77888888887433
No 233
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=9.2e-31 Score=270.23 Aligned_cols=245 Identities=26% Similarity=0.375 Sum_probs=196.6
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 422 LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
||.|++|.||+|.+..+++.||+|++.... .....+.+|+.+++.++ ||||+++++.+......++||||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~ 74 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN------HPFIVKLYRTFKDKKYIYMLMEY 74 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC------CCCEeeeeeeEEcCCccEEEEec
Confidence 799999999999999999999999987532 23456777888887764 78999999999999999999999
Q ss_pred cc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+. ++|.+++..... ++...+..++.||+.||.|||+++++|+||+|+||+++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~~------l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~--~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 75 CLGGELWTILRDRGL------FDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS--NGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCCcHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC--CCCEEEeeCCcccccCcc
Confidence 87 567776654321 788999999999999999999999999999999999985 788999999998765443
Q ss_pred --cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHhhCCCCHHHHhhcccccc
Q 005415 577 --LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA--VVMILARIIGMLGPIDLEMLMQGQEIYK 652 (697)
Q Consensus 577 --~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~--~~e~l~~I~~~lg~~p~e~~~~~~~~~~ 652 (697)
.....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.... ..+.+..+......+.. +.
T Consensus 147 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 217 (262)
T cd05572 147 QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEF---------PN 217 (262)
T ss_pred cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCC---------Cc
Confidence 233467889999999988889999999999999999999999998766 55555555421111110 00
Q ss_pred cccCCchhhhhHHHHHHHHHHHhhhhccC-----HHHHH--HhhcccCCC
Q 005415 653 YFTKEYDLYYINEVCFANIFISLVVIRLT-----LEYAA--LWLFGIDQN 695 (697)
Q Consensus 653 ~~~~~~~l~~i~~~cw~~l~~~~~~~r~t-----~e~~~--~wl~~~~~n 695 (697)
.....+..++..||... |..|.+ ++++. +|++..+|+
T Consensus 218 --~~~~~~~~~i~~~l~~~----p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 218 --YIDKAAKDLIKQLLRRN----PEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred --ccCHHHHHHHHHHccCC----hhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 11457788888888755 777877 78888 999988776
No 234
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=1.5e-30 Score=267.76 Aligned_cols=248 Identities=20% Similarity=0.300 Sum_probs=199.7
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.++|++.+.||.|++|.||+|.+ .++.||+|.+........++.+|+.+++.++ |+||+++++++......+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLR------HPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcC------CcceeeeEEEEcCCCCeE
Confidence 46799999999999999999986 4889999999876555567888998888874 789999999999889999
Q ss_pred EEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||++ ++|.+++..... ..+++..+..++.|++.||.|||+++++|+||||+||+++. ++.++|+|||.+.
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~--~~~~~l~d~g~~~ 150 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE--DLVAKVSDFGLAK 150 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC--CCCEEEccccccc
Confidence 9999998 577777654332 13889999999999999999999999999999999999985 7889999999997
Q ss_pred ccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 572 FQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 572 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
...........+..|+|||.+.+..++.++||||||+++|+|++ |..||...+..+....+..... +.
T Consensus 151 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~---------- 219 (256)
T cd05039 151 EASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR-ME---------- 219 (256)
T ss_pred ccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-CC----------
Confidence 76544443445667999999988889999999999999999998 9999988877665555433211 00
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
........+..++..||... |..|+++++++.-|.
T Consensus 220 -~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 220 -APEGCPPEVYKVMKDCWELD----PAKRPTFKQLREQLA 254 (256)
T ss_pred -CccCCCHHHHHHHHHHhccC----hhhCcCHHHHHHHHh
Confidence 00122456777777777654 888999998886553
No 235
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=5.7e-31 Score=272.20 Aligned_cols=245 Identities=27% Similarity=0.345 Sum_probs=191.4
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh----------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----------~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~ 484 (697)
+|.+.+.||.|++|.||+|.+..+++.||+|.+..... ....+.+|+.+++.++ ||||++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~ 74 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ------HENIVQYLGS 74 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC------CCCeeeEEEE
Confidence 57888999999999999999988999999998864321 2245667888888774 7899999999
Q ss_pred EEecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 485 f~~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
+......++||||+++ +|..++.... .+++..+..++.|++.||.|||++|++||||+|+||+++. ++.++
T Consensus 75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~--~~~~~ 146 (267)
T cd06628 75 SLDADHLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN--KGGIK 146 (267)
T ss_pred EEeCCccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcC--CCCEE
Confidence 9999999999999975 5666664322 2788899999999999999999999999999999999985 78899
Q ss_pred EeeCCCccccccc---------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Q 005415 564 IIDLGSSCFQTDN---------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 634 (697)
Q Consensus 564 L~DFGla~~~~~~---------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~ 634 (697)
|+|||.+...... .....++..|+|||.+.+..++.++|+|||||++|+|++|+.||...+....+..+..
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 226 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE 226 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc
Confidence 9999988655421 1123567889999999988899999999999999999999999987766554444433
Q ss_pred hhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 635 MLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 635 ~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
...+..+ ......+..++..||... |..|.++++++ +|+
T Consensus 227 ~~~~~~~------------~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 227 NASPEIP------------SNISSEAIDFLEKTFEID----HNKRPTAAELLKHPFL 267 (267)
T ss_pred cCCCcCC------------cccCHHHHHHHHHHccCC----chhCcCHHHHhhCCCC
Confidence 2111100 112345556666666544 78889998887 664
No 236
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=1.1e-30 Score=272.81 Aligned_cols=256 Identities=20% Similarity=0.251 Sum_probs=196.6
Q ss_pred cCceEEEEEeccCCCCceEEEEECC-----CCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~-----~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
.++|++.+.||+|++|.||+|.+.. ++..||+|.+.... .....+..|+.+++.++ |+||+++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~ 78 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN------HQNIVRLIGVS 78 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEE
Confidence 4679999999999999999999877 77899999886432 22345677887777764 78999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhcc-CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC-cceE
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQES-GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ-RCEI 562 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~~-~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~-~~~v 562 (697)
......++||||+. ++|.+++...... .....+++..+..++.||+.||.|||+++++||||||+||+++... ...+
T Consensus 79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcce
Confidence 99889999999996 5777777554321 1122488999999999999999999999999999999999998532 3468
Q ss_pred EEeeCCCccccccccc-----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhh
Q 005415 563 KIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 563 KL~DFGla~~~~~~~~-----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~l 636 (697)
||+|||++........ ....+..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~ 238 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG 238 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 9999999876532211 1223467999999998889999999999999999997 999999887766655543321
Q ss_pred CCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 637 g~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
. ++. .......+..++..||... |..|+++++++..|.
T Consensus 239 ~-~~~-----------~~~~~~~~~~~i~~cl~~~----p~~Rps~~~vl~~l~ 276 (277)
T cd05036 239 R-LDP-----------PKGCPGPVYRIMTDCWQHT----PEDRPNFATILERIQ 276 (277)
T ss_pred c-CCC-----------CCCCCHHHHHHHHHHcCCC----cccCcCHHHHHHHhh
Confidence 1 110 0112346667777777754 888999998886654
No 237
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.97 E-value=6.5e-31 Score=278.96 Aligned_cols=250 Identities=20% Similarity=0.246 Sum_probs=190.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcE--EEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVD--VCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~--VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.+.||+|+||.||+|.+..++.. +++|.++.. ......+.+|+.++..+. +|+||+++++++....
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~-----~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRG 81 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc-----CCCCcceEEEEECCCC
Confidence 5799999999999999999998777754 577766532 233456778998888873 3789999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~----------~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~ 558 (697)
..++||||+. ++|.+++....... ....+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~-- 159 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE-- 159 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC--
Confidence 9999999997 57777775433211 1124789999999999999999999999999999999999985
Q ss_pred cceEEEeeCCCcccccccccc--ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHh
Q 005415 559 RCEIKIIDLGSSCFQTDNLCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 559 ~~~vKL~DFGla~~~~~~~~~--~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~ 635 (697)
++.+||+|||++......... ...+..|+|||.+.+..++.++|||||||++|+|+| |..||.+.+..+....+...
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~ 239 (303)
T cd05088 160 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 239 (303)
T ss_pred CCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC
Confidence 788999999998643222111 223567999999988889999999999999999998 99999887776655554221
Q ss_pred hCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 636 lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
... .........+..++..||... |..|.++++++
T Consensus 240 ~~~------------~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il 274 (303)
T cd05088 240 YRL------------EKPLNCDDEVYDLMRQCWREK----PYERPSFAQIL 274 (303)
T ss_pred CcC------------CCCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHH
Confidence 110 001122345667777777655 66777777766
No 238
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1.4e-30 Score=276.42 Aligned_cols=253 Identities=23% Similarity=0.345 Sum_probs=194.3
Q ss_pred eecCceEEEEEeccCCCCceEEEEECC-------CCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~-------~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l 481 (697)
+..++|.+.+.||+|+||.||+|.+.. ....+|+|+++.. ......+..|+.+++.+. +||||+++
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~ 89 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINL 89 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc-----CCCCEeeE
Confidence 445789999999999999999998643 2357999999754 233456777888888774 37899999
Q ss_pred EEEEEecCeEEEEEEccc-cchHHHHHhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCc
Q 005415 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 550 (697)
Q Consensus 482 ~~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~----------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~ 550 (697)
++++......++||||+. ++|.+++...... .....+++..+..++.|++.||+|||++|++||||||+
T Consensus 90 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~ 169 (307)
T cd05098 90 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAAR 169 (307)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHH
Confidence 999999999999999997 5787777653321 11224788999999999999999999999999999999
Q ss_pred cccccccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc
Q 005415 551 NILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDA 624 (697)
Q Consensus 551 NILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~ 624 (697)
||+++. ++.+||+|||.+....... ....+++.|+|||++.+..++.++|+|||||++|+|++ |..||.+.+
T Consensus 170 Nill~~--~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 170 NVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred heEEcC--CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 999985 7889999999986543211 11223467999999998889999999999999999998 999998877
Q ss_pred HHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 625 VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 625 ~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
..+....+..... ++ ........+..++..||... |..|++++++.
T Consensus 248 ~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~li~~~l~~~----p~~Rps~~evl 293 (307)
T cd05098 248 VEELFKLLKEGHR-MD-----------KPSNCTNELYMMMRDCWHAV----PSQRPTFKQLV 293 (307)
T ss_pred HHHHHHHHHcCCC-CC-----------CCCcCCHHHHHHHHHHcccC----hhhCcCHHHHH
Confidence 7665555432211 00 01122346667777787754 77888888877
No 239
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97 E-value=7.6e-31 Score=279.84 Aligned_cols=246 Identities=21% Similarity=0.261 Sum_probs=190.0
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCc----EEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~----~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
..+|++.+.||+|+||.||+|.+..++. .||+|+++.. ......+.+|+.+++.+. ||||+++++++.
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~g~~~ 79 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD------NPHVCRLLGICL 79 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEc
Confidence 3679999999999999999999866655 4899998743 233456777888887764 889999999987
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
.. ..++|+||+. ++|.+++..... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~--~~~~kl~ 151 (316)
T cd05108 80 TS-TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT--PQHVKIT 151 (316)
T ss_pred CC-CceeeeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC--CCcEEEc
Confidence 64 5678999987 567777664332 2788889999999999999999999999999999999985 7789999
Q ss_pred eCCCccccccccc-----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 566 DLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 566 DFGla~~~~~~~~-----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|||++........ ....+..|+|||.+.+..++.++|||||||++|||++ |..||.+....+.. .+......+
T Consensus 152 DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~ 230 (316)
T cd05108 152 DFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL 230 (316)
T ss_pred cccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHhCCCCC
Confidence 9999976543221 1223567999999999999999999999999999998 99999887665543 333322222
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHh
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALW 688 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~w 688 (697)
+. .......+..++..||... |..|.++.++...
T Consensus 231 ~~-----------~~~~~~~~~~li~~cl~~~----p~~Rps~~~l~~~ 264 (316)
T cd05108 231 PQ-----------PPICTIDVYMIMVKCWMID----ADSRPKFRELIIE 264 (316)
T ss_pred CC-----------CCCCCHHHHHHHHHHccCC----hhhCcCHHHHHHH
Confidence 11 1123456788999999854 7778888877733
No 240
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=1.3e-30 Score=273.93 Aligned_cols=261 Identities=21% Similarity=0.248 Sum_probs=201.2
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCC----------------cEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCC
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTG----------------VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPAD 474 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g----------------~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~ 474 (697)
.++|++++.||+|+||.||+|.+...+ ..||+|.+.... .....+.+|+.+++.++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~------ 77 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLS------ 77 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcC------
Confidence 468999999999999999999876543 568999987543 34456778899888875
Q ss_pred CCceeEEEEEEEecCeEEEEEEccc-cchHHHHHhhhcc-----CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCC
Q 005415 475 EHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQES-----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (697)
Q Consensus 475 hpnIv~l~~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~-----~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLK 548 (697)
||||+++++++......++|||++. ++|..++...... .....+++..++.++.|++.||.|||+++|+|+|||
T Consensus 78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk 157 (296)
T cd05051 78 DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA 157 (296)
T ss_pred CCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 7899999999999999999999997 4676666543310 011248899999999999999999999999999999
Q ss_pred CccccccccCcceEEEeeCCCccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q 005415 549 PENILIKSYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFP 621 (697)
Q Consensus 549 P~NILl~~~~~~~vKL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt--G~~PF~ 621 (697)
|+||+++. ++.++|+|||++...... .....+++.|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 158 p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 158 TRNCLVGK--NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred hhceeecC--CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 99999995 689999999998654322 122345678999999998889999999999999999998 788998
Q ss_pred CCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 622 NDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 622 ~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
..+..+.+..+............ ..........+..++..||... |..|.+++++..||.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~~----p~~Rpt~~el~~~L~ 295 (296)
T cd05051 236 HLTDQQVIENAGHFFRDDGRQIY-----LPRPPNCPKDIYELMLECWRRD----EEDRPTFREIHLFLQ 295 (296)
T ss_pred CcChHHHHHHHHhcccccccccc-----CCCccCCCHHHHHHHHHHhccC----hhcCCCHHHHHHHhc
Confidence 87777777666544222111100 0011112346788888888655 889999999998875
No 241
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=313.40 Aligned_cols=254 Identities=20% Similarity=0.278 Sum_probs=204.6
Q ss_pred cCceEEEEEeccCCCCceEEEEECCC-----CcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~-----g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
...-++.+.||+|+||.||.|.-... ...||||.+++. ......++.|..++..+ +|||||+++|++
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f------~HpNiv~liGv~ 764 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF------DHPNIVSLIGVC 764 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC------CCcceeeEEEee
Confidence 45678889999999999999976432 235899998864 44456677777777766 489999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhccC-CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQESG-GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~~~-~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
.+....+|++|||. |+|+.+++..+... ....++..++..++.||++|+.||+++++|||||..+|+|++. ...+|
T Consensus 765 l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~--~r~VK 842 (1025)
T KOG1095|consen 765 LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDE--RRVVK 842 (1025)
T ss_pred cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecc--cCcEE
Confidence 99999999999997 67888887653221 2334889999999999999999999999999999999999996 68999
Q ss_pred EeeCCCccccccccccc-----cccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhC
Q 005415 564 IIDLGSSCFQTDNLCLY-----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 564 L~DFGla~~~~~~~~~~-----~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg 637 (697)
|+|||+|+..-+..... .-+..|||||.+....++.|+|||||||+|||++| |..||++.+..+++..+++..
T Consensus 843 IaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg- 921 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG- 921 (1025)
T ss_pred EcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-
Confidence 99999998433322211 22467999999999999999999999999999999 999999999988887654432
Q ss_pred CCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 638 ~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
++...-.++..++.+|.+||+.....+|.-+...+|..
T Consensus 922 -----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~ 959 (1025)
T KOG1095|consen 922 -----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDP 959 (1025)
T ss_pred -----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhh
Confidence 33334467889999999999998777776665555544
No 242
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=8e-31 Score=274.35 Aligned_cols=250 Identities=20% Similarity=0.254 Sum_probs=190.9
Q ss_pred CceEEEEEeccCCCCceEEEEE----CCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQD----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d----~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
..|++.+.||+|+||+||+|.+ ...+..|++|.+.... .....+.+|+.+++.++ ||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~ 78 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH------HPNIVCLLGVVTQ 78 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC------CCCeeeEEEEEec
Confidence 4689999999999999999985 3456889999987432 23356777888888774 7899999999999
Q ss_pred cCeEEEEEEccc-cchHHHHHhhhcc-----------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccc
Q 005415 488 LEHLFIVCELLR-ANLYEFQKFNQES-----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (697)
Q Consensus 488 ~~~l~LVmEyl~-gsL~~~l~~~~~~-----------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~ 555 (697)
....++||||+. ++|.+++...... .....+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 999999999997 4677776432210 0112377888999999999999999999999999999999999
Q ss_pred ccCcceEEEeeCCCccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHH
Q 005415 556 SYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMIL 629 (697)
Q Consensus 556 ~~~~~~vKL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l 629 (697)
. ++.+||+|||++...... .....++..|+|||.+.+..++.++|+|||||++|||++ |..||.+.+...+.
T Consensus 159 ~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05090 159 E--QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVI 236 (283)
T ss_pred C--CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 5 778999999998654322 122344667999999998889999999999999999999 99999887766655
Q ss_pred HHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 630 ARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 630 ~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
..+.... .++. .......+..++..||... |..|+++.++..
T Consensus 237 ~~~~~~~-~~~~-----------~~~~~~~~~~li~~cl~~~----p~~Rp~~~~i~~ 278 (283)
T cd05090 237 EMVRKRQ-LLPC-----------SEDCPPRMYSLMTECWQEG----PSRRPRFKDIHT 278 (283)
T ss_pred HHHHcCC-cCCC-----------CCCCCHHHHHHHHHHcccC----cccCcCHHHHHH
Confidence 5543311 1110 0122456777777787655 677777777663
No 243
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=1e-30 Score=276.20 Aligned_cols=250 Identities=18% Similarity=0.241 Sum_probs=193.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCc--EEEEEEEec--chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGV--DVCLKIIKN--DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~--~VAVKii~~--~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.+.||.|+||.||+|.+..++. .+++|.++. .......+.+|+.++..+. +||||+++++++....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~~~~~~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG-----HHPNIINLLGACENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc-----CCCchhheEEEEccCC
Confidence 479999999999999999999877664 478888874 2233456778888888774 3889999999999989
Q ss_pred eEEEEEEccc-cchHHHHHhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~----------~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~ 558 (697)
..++||||++ ++|.+++....... ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~-- 154 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE-- 154 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC--
Confidence 9999999997 57777775432111 1124888999999999999999999999999999999999985
Q ss_pred cceEEEeeCCCcccccccccc--ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHh
Q 005415 559 RCEIKIIDLGSSCFQTDNLCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 559 ~~~vKL~DFGla~~~~~~~~~--~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~ 635 (697)
++.+||+|||++......... ...+..|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+...
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~ 234 (297)
T cd05089 155 NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 234 (297)
T ss_pred CCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 788999999998643322221 122456999999998889999999999999999998 99999988877776665443
Q ss_pred hCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 636 lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
...... ......+..++..||... |..|.+++++.
T Consensus 235 ~~~~~~------------~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~ 269 (297)
T cd05089 235 YRMEKP------------RNCDDEVYELMRQCWRDR----PYERPPFAQIS 269 (297)
T ss_pred CCCCCC------------CCCCHHHHHHHHHHcCCC----hhhCcCHHHHH
Confidence 221111 112346777888888755 67777777775
No 244
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.97 E-value=1.2e-30 Score=270.30 Aligned_cols=249 Identities=20% Similarity=0.266 Sum_probs=194.7
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCc---EEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~---~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
.++|+..+.||+|+||.||+|.+..++. .+|+|.+... ......+..|+++++.++ ||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 77 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS------HHNIIRLEGVVTK 77 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCC------CCCeeEEEEEEcc
Confidence 4578999999999999999999876554 7999998754 233456677777777664 7899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
.+..++||||+++ +|..++.... ..+++..+..++.|++.||.|||+.+++|+||||+||+++. ++.+||+|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~--~~~~kl~d 150 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS--NLECKVSD 150 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC--CCcEEECC
Confidence 9999999999985 5555554322 12788999999999999999999999999999999999985 78899999
Q ss_pred CCCcccccccccc------ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 567 LGSSCFQTDNLCL------YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 567 FGla~~~~~~~~~------~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
||++......... ...+..|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+......+
T Consensus 151 fg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~ 230 (268)
T cd05063 151 FGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLP 230 (268)
T ss_pred CccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCC
Confidence 9998654332111 112356999999998889999999999999999998 999998887777666665432211
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
. ..+....+..++..||... |..|++++++...|.
T Consensus 231 ~------------~~~~~~~~~~li~~c~~~~----p~~Rp~~~~i~~~l~ 265 (268)
T cd05063 231 A------------PMDCPSAVYQLMLQCWQQD----RARRPRFVDIVNLLD 265 (268)
T ss_pred C------------CCCCCHHHHHHHHHHcCCC----cccCcCHHHHHHHHH
Confidence 1 1123456778888888655 788889988886553
No 245
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=2.2e-30 Score=268.21 Aligned_cols=246 Identities=24% Similarity=0.306 Sum_probs=189.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~------~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
..|++.+.||+|+||.||++.+..+++.||||.+.... .....+.+|+.+++.+. ||||+++++++..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~ 75 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL------HERIVQYYGCLRD 75 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC------CCCeeeEEeEecc
Confidence 46999999999999999999999999999999886321 22346677888888774 7899999999876
Q ss_pred c--CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEE
Q 005415 488 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (697)
Q Consensus 488 ~--~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL 564 (697)
. ..+++||||+++ +|.+++.... .+++..+..++.|++.||.|||+++|+|+||||+||+++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l 147 (265)
T cd06652 76 PMERTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDS--VGNVKL 147 (265)
T ss_pred CCCceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecC--CCCEEE
Confidence 4 568899999975 6766665322 1778889999999999999999999999999999999985 788999
Q ss_pred eeCCCcccccc------ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCC
Q 005415 565 IDLGSSCFQTD------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 565 ~DFGla~~~~~------~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
+|||++..... ......++..|+|||++.+..++.++|+|||||++|+|++|+.||........+.++......
T Consensus 148 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 227 (265)
T cd06652 148 GDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN 227 (265)
T ss_pred CcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC
Confidence 99998865432 122345788999999999888999999999999999999999999877655554443321111
Q ss_pred CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 639 IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 639 ~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
+. .+. .....+..++..||. .+..|++.++.. +|+
T Consensus 228 ~~---------~~~--~~~~~~~~~i~~~l~-----~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 228 PV---------LPP--HVSDHCRDFLKRIFV-----EAKLRPSADELLRHTFV 264 (265)
T ss_pred CC---------Cch--hhCHHHHHHHHHHhc-----ChhhCCCHHHHhcCccc
Confidence 10 000 111234456666662 478899999888 775
No 246
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=9.3e-31 Score=273.66 Aligned_cols=255 Identities=23% Similarity=0.337 Sum_probs=192.9
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-----
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY----- 486 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~----- 486 (697)
..++|++.+.||+|+||.||+|.+..+++.+|+|++.........+..|+.+++.+. +||||+++++++.
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS-----DHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh-----cCCCeeeeeeeeeecccC
Confidence 357899999999999999999999999999999998764444456778888888874 3889999999885
Q ss_pred ecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 487 ~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
.....++||||+++ +|.+++...... ...+++..+..++.|++.||.|||+.+|+||||||+||+++. ++.++|+
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~kl~ 166 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKR--GERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT--EGGVKLV 166 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhcc--CccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC--CCCEEEc
Confidence 34568999999975 566655422211 123788899999999999999999999999999999999995 7789999
Q ss_pred eCCCccccccc---cccccccCCCCCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 566 DLGSSCFQTDN---LCLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 566 DFGla~~~~~~---~~~~~gt~~Y~APE~l~~-----~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
|||++...... .....+++.|+|||++.. ..++.++|||||||++|+|++|+.||........+..+...
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-- 244 (286)
T cd06638 167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-- 244 (286)
T ss_pred cCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--
Confidence 99998754332 223468899999999853 45788999999999999999999999877655444333221
Q ss_pred CCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 638 ~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.++. .. ... .....+..++..||... |..|.+++++. +|+
T Consensus 245 ~~~~-~~-----~~~--~~~~~~~~li~~~l~~~----p~~Rps~~ell~~~~~ 286 (286)
T cd06638 245 PPPT-LH-----QPE--LWSNEFNDFIRKCLTKD----YEKRPTVSDLLQHVFI 286 (286)
T ss_pred CCCc-cc-----CCC--CcCHHHHHHHHHHccCC----cccCCCHHHHhhcccC
Confidence 1110 00 000 11235666777776544 88899999987 553
No 247
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=4.8e-31 Score=276.42 Aligned_cols=263 Identities=22% Similarity=0.276 Sum_probs=196.9
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
+|+..+.||+|+||.||++.+..+++.||+|.+.... .....+..|+.++..+. +|+||+++++++......+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~iv~~~~~~~~~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS-----DCPYIVKFYGALFREGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc-----CCCCEeeeeeEEecCCcEE
Confidence 4667788999999999999999999999999987532 33456677887777664 3789999999999999999
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhc-CccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~-gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
++|||+..++..+....... ....+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.++|+|||++.
T Consensus 80 ~~~e~~~~~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~ 156 (288)
T cd06616 80 ICMELMDISLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR--NGNIKLCDFGISG 156 (288)
T ss_pred EEEecccCCHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc--CCcEEEeecchhH
Confidence 99999988766654332111 112388999999999999999999974 9999999999999985 7789999999986
Q ss_pred ccccc--cccccccCCCCCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 572 FQTDN--LCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 572 ~~~~~--~~~~~gt~~Y~APE~l~~~---~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
..... .....++..|+|||++.+. .++.++|||||||++|+|++|+.||..... ....+.+.....++....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~- 233 (288)
T cd06616 157 QLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPILSN- 233 (288)
T ss_pred HhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcCCC-
Confidence 54332 2234678889999999876 689999999999999999999999976542 222222222211111100
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCCC
Q 005415 647 GQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQNK 696 (697)
Q Consensus 647 ~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n~ 696 (697)
.........+..++..||... |..|.+++++. +|+..+.+.+
T Consensus 234 ----~~~~~~~~~l~~li~~~l~~~----p~~Rpt~~~i~~~~~~~~~~~~~ 277 (288)
T cd06616 234 ----SEEREFSPSFVNFINLCLIKD----ESKRPKYKELLEHPFIKDYEERN 277 (288)
T ss_pred ----cCCCccCHHHHHHHHHHccCC----hhhCcCHHHHhcChhhhchhhcc
Confidence 000122345667777777654 88899999998 9997665543
No 248
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.97 E-value=1.2e-30 Score=274.20 Aligned_cols=254 Identities=23% Similarity=0.281 Sum_probs=197.9
Q ss_pred CceEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEEecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~-----~~g~~VAVKii~~~-~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
..|.+.+.||.|+||+||++.+. .++..+|+|.+... ......+.+|+.+++.++ ||||+++++++..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ------HEHIVKFYGVCVE 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEec
Confidence 57999999999999999999852 34567999998753 333456788888888774 7899999999999
Q ss_pred cCeEEEEEEccc-cchHHHHHhhhc-------cCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc
Q 005415 488 LEHLFIVCELLR-ANLYEFQKFNQE-------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 559 (697)
Q Consensus 488 ~~~l~LVmEyl~-gsL~~~l~~~~~-------~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~ 559 (697)
....++||||+. ++|.+++..... ......+++..+..++.||+.||.|||++|++||||||+|||++. +
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~--~ 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE--N 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--C
Confidence 999999999997 567666653321 011123889999999999999999999999999999999999985 7
Q ss_pred ceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHH
Q 005415 560 CEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARII 633 (697)
Q Consensus 560 ~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~ 633 (697)
+.++|+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ |.+||......+.+..+.
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~ 236 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 236 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 889999999987543221 12234678999999998889999999999999999998 999998888777776665
Q ss_pred HhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 634 GMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 634 ~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
....... . -.....+..++..||... |..|++++++...|..
T Consensus 237 ~~~~~~~----------~--~~~~~~l~~li~~~l~~~----p~~Rpt~~~v~~~l~~ 278 (288)
T cd05093 237 QGRVLQR----------P--RTCPKEVYDLMLGCWQRE----PHMRLNIKEIHSLLQN 278 (288)
T ss_pred cCCcCCC----------C--CCCCHHHHHHHHHHccCC----hhhCCCHHHHHHHHHH
Confidence 4221110 0 012346777777777655 8889999998866653
No 249
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=4.6e-31 Score=273.21 Aligned_cols=247 Identities=21% Similarity=0.298 Sum_probs=190.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
++|++.+.||+|+||.||+|.+..+++.||+|+++... .....+.+|+.+++.++ ||||+++++.+......+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~------h~~ii~~~~~~~~~~~~~ 82 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK------HSNIVAYFGSYLRRDKLW 82 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCC------CCCeeeEEEEEEeCCEEE
Confidence 57899999999999999999999999999999987543 22345667887777764 889999999999999999
Q ss_pred EEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||+++ +|.+++.... .+++..++.++.|++.||.|||+.||+|+||||+||+++. ++.++|+|||++.
T Consensus 83 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~~l~dfg~~~ 154 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTD--NGHVKLADFGVSA 154 (267)
T ss_pred EEEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECcceeee
Confidence 99999985 6766665332 2889999999999999999999999999999999999985 7889999999986
Q ss_pred ccccc---cccccccCCCCCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~---~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
..... .....++..|+|||++. ...++.++|+|||||++|+|++|..||........+..+......++ .. .
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~-~ 232 (267)
T cd06645 155 QITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPP-KL-K 232 (267)
T ss_pred EccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCC-cc-c
Confidence 54332 23356889999999984 44588899999999999999999999976655444433322111111 00 0
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
........+..++..||.. .|..|.++++++
T Consensus 233 ------~~~~~~~~~~~li~~~l~~----~P~~R~~~~~ll 263 (267)
T cd06645 233 ------DKMKWSNSFHHFVKMALTK----NPKKRPTAEKLL 263 (267)
T ss_pred ------ccCCCCHHHHHHHHHHccC----CchhCcCHHHHh
Confidence 0001123456666666653 588899998876
No 250
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.1e-30 Score=280.03 Aligned_cols=202 Identities=22% Similarity=0.297 Sum_probs=162.9
Q ss_pred EEEEeccC--CCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 418 VTEYLGSA--AFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 418 i~e~LG~G--~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
++++||+| +|++||++.+..+|+.||+|++... ......+.+|+.+++.++ ||||+++++++...+..+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------hpniv~~~~~~~~~~~~~ 75 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFN------HPNIVPYRATFIADNELW 75 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcC------CCCeeeEEEEEEECCEEE
Confidence 56789999 6789999999999999999999753 233345667888887764 889999999999999999
Q ss_pred EEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||+. ++|.+++...... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.++++||+...
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~--~~~~~l~~~~~~~ 149 (327)
T cd08227 76 VVTSFMAYGSAKDLICTHFMD----GMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNL 149 (327)
T ss_pred EEEeccCCCcHHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec--CCcEEEcccchhh
Confidence 9999998 4666666543221 2788999999999999999999999999999999999985 7789999998643
Q ss_pred cccc----------ccccccccCCCCCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Q 005415 572 FQTD----------NLCLYVQSRSYRAPEVIIG--LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILAR 631 (697)
Q Consensus 572 ~~~~----------~~~~~~gt~~Y~APE~l~~--~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~ 631 (697)
.... ......++..|+|||++.+ ..++.++|||||||++|+|++|..||...........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~ 221 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE 221 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHH
Confidence 3211 1112345677999999976 3589999999999999999999999987665544433
No 251
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=1.2e-30 Score=267.89 Aligned_cols=239 Identities=23% Similarity=0.319 Sum_probs=184.1
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.++ ||||+++++++......++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~ 74 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYS------HPNIVRLIGVCTQKQPIYIVMEL 74 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEcCCCCeEEEEee
Confidence 3689999999999999999999999988643 334466788888888764 88999999999999999999999
Q ss_pred ccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+.+ +|.+++.... ..+++..++.++.|++.||.|||+++|+||||||+||+++. ++.+||+|||.+......
T Consensus 75 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 75 VQGGDFLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTE--KNVLKISDFGMSREEEDG 147 (252)
T ss_pred ccCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcC--CCcEEECccccCcccccc
Confidence 975 5666654321 12788999999999999999999999999999999999985 778999999998654332
Q ss_pred ccc-----ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 577 LCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 577 ~~~-----~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
... ...+..|+|||.+.+..++.++|||||||++|+|++ |..||...........+..... ++..
T Consensus 148 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~-------- 218 (252)
T cd05084 148 VYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR-LPCP-------- 218 (252)
T ss_pred cccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC-CCCc--------
Confidence 111 122456999999998889999999999999999998 9999987766554444432211 1100
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
-.....+..++..||. ..|..|++++++..
T Consensus 219 ---~~~~~~~~~li~~~l~----~~p~~Rps~~~~~~ 248 (252)
T cd05084 219 ---ELCPDAVYRLMERCWE----YDPGQRPSFSTVHQ 248 (252)
T ss_pred ---ccCCHHHHHHHHHHcC----CChhhCcCHHHHHH
Confidence 0112345555555555 45888999988873
No 252
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=1.1e-30 Score=308.24 Aligned_cols=206 Identities=25% Similarity=0.361 Sum_probs=170.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.++||+|+||.||+|.+..+++.||||+++.. .....++.+|+++++.++ ||||+++++++...+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~------HPNIVkl~~v~~d~~ 75 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI------HPGIVPVYSICSDGD 75 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC------CcCcCeEEEEEeeCC
Confidence 6899999999999999999999999999999998753 223456778888888774 889999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccC-----CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESG-----GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~-----~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
..++||||+++ +|.+++....... ....++...+..++.||+.||.|||++||+||||||+|||++. ++.++
T Consensus 76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~--dg~vK 153 (932)
T PRK13184 76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGL--FGEVV 153 (932)
T ss_pred EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcC--CCCEE
Confidence 99999999975 6666665321110 1122566778899999999999999999999999999999985 78899
Q ss_pred EeeCCCcccccc---------------------ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005415 564 IIDLGSSCFQTD---------------------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN 622 (697)
Q Consensus 564 L~DFGla~~~~~---------------------~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~ 622 (697)
|+|||++..... .....+||+.|+|||++.+..++.++|||||||++|||+||..||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999865411 01124689999999999999999999999999999999999999987
Q ss_pred CcHHH
Q 005415 623 DAVVM 627 (697)
Q Consensus 623 ~~~~e 627 (697)
.....
T Consensus 234 ~~~~k 238 (932)
T PRK13184 234 KKGRK 238 (932)
T ss_pred cchhh
Confidence 65443
No 253
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=6.9e-31 Score=282.69 Aligned_cols=265 Identities=30% Similarity=0.471 Sum_probs=207.3
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
.+.++|++.+.||+|+||.||+|.+..+++.+|+|.+... ........+|+.+++.+. +||||+++++++..
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~ni~~~~~~~~~ 78 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-----DHPNIVKLLNVIKA 78 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc-----CCCCccceeeeecc
Confidence 4567899999999999999999999889999999988532 223345667888888872 37899999999875
Q ss_pred c--CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 488 L--EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 488 ~--~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
. ...++||||+.++|..++... .+++..++.++.||+.||.|||+.||+|+||||+||+++. ++.+||+
T Consensus 79 ~~~~~~~lv~e~~~~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~--~~~~kl~ 149 (337)
T cd07852 79 ENDKDIYLVFEYMETDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS--DCRVKLA 149 (337)
T ss_pred CCCceEEEEecccccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEe
Confidence 4 468999999998887776532 2788888999999999999999999999999999999985 8899999
Q ss_pred eCCCccccccc--------cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhh
Q 005415 566 DLGSSCFQTDN--------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 566 DFGla~~~~~~--------~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~l 636 (697)
|||.+...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|++||.+....+.+.++....
T Consensus 150 d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~ 229 (337)
T cd07852 150 DFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVI 229 (337)
T ss_pred eccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 99988654322 223567889999998865 457889999999999999999999999998888899988888
Q ss_pred CCCCHHHHhhccc-----------------cccccc-CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 637 GPIDLEMLMQGQE-----------------IYKYFT-KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 637 g~~p~e~~~~~~~-----------------~~~~~~-~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
+.++.+.+..... ....+. ....+..++..||. ..|..|.++++++ +|+...+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~----~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 230 GPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLV----FNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred CCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhcc----CCcccccCHHHHhhChhhhhhc
Confidence 8776544332100 000011 12345556666664 3488899999999 8987654
No 254
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=1.6e-30 Score=269.41 Aligned_cols=248 Identities=21% Similarity=0.264 Sum_probs=196.6
Q ss_pred CceEEEEEeccCCCCceEEEEECCC---CcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~---g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
++|++.+.||+|+||.||+|.+... ...||||+++.. ......+.+|+.+++.++ ||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 77 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD------HPNIIRLEGVVTKS 77 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCC------CCCcceEeEEEecC
Confidence 5799999999999999999988644 468999998753 233456677888887774 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
...++||||+.+ +|.+++..... .+++..+..++.|++.||.|||+++|+|+||||+||+++. ++.++|+||
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~--~~~~~l~df 150 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS--NLVCKVSDF 150 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC--CCCEEECcc
Confidence 999999999975 67776654322 3889999999999999999999999999999999999985 788999999
Q ss_pred CCcccccccc---c--cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 568 GSSCFQTDNL---C--LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 568 Gla~~~~~~~---~--~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
|++....... . ...++..|+|||.+.+..++.++||||||+++|+|++ |..||......+....+.+....+..
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (266)
T cd05033 151 GLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPP 230 (266)
T ss_pred chhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 9987654211 1 1223567999999998889999999999999999998 99999887777766666543222211
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
......+..++..||... |..|++++++...|.
T Consensus 231 ------------~~~~~~l~~li~~cl~~~----p~~Rp~~~ei~~~l~ 263 (266)
T cd05033 231 ------------MDCPSALYQLMLDCWQKD----RNERPTFSQIVSTLD 263 (266)
T ss_pred ------------CCCCHHHHHHHHHHcCCC----cccCcCHHHHHHHHH
Confidence 123456778888888755 778889988886553
No 255
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=2.8e-30 Score=266.32 Aligned_cols=248 Identities=23% Similarity=0.298 Sum_probs=188.1
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||.|++|.||+|.+..+++.||+|+++.... .......|..++.. ..+|+||+++++++...+..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~-----~~~~~~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMI-----QGESPYVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhh-----cCCCCCeeeeeeeEEcCCeEEEEE
Confidence 568999999999999999999999999875421 11122233333222 235899999999999999999999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+.+ +|..++.... .+++..+..++.|++.||.|||+.+|+|+||+|+||+++. ++.++|+|||++....
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~ 148 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRNGL 148 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEeecccceecc
Confidence 99975 6666654322 2788999999999999999999999999999999999985 7889999999886543
Q ss_pred cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccc
Q 005415 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 654 (697)
Q Consensus 575 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~ 654 (697)
. .....++..|+|||.+.+..++.++||||||+++|+|++|..||...+.......+.......+.... .
T Consensus 149 ~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 218 (260)
T cd05611 149 E-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVK---------E 218 (260)
T ss_pred c-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCccc---------c
Confidence 3 23346788999999999888899999999999999999999999888777666665432211111100 0
Q ss_pred cCCchhhhhHHHHHHHHHHHhhhhcc---CHHHHH--HhhcccCC
Q 005415 655 TKEYDLYYINEVCFANIFISLVVIRL---TLEYAA--LWLFGIDQ 694 (697)
Q Consensus 655 ~~~~~l~~i~~~cw~~l~~~~~~~r~---t~e~~~--~wl~~~~~ 694 (697)
.....+..++..||. ..|..|. +.++++ +|+..++|
T Consensus 219 ~~~~~~~~~i~~~l~----~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 219 FCSPEAVDLINRLLC----MDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred cCCHHHHHHHHHHcc----CCHHHccCCCcHHHHHcChHhhcCCC
Confidence 123455566666665 4477777 457777 99988765
No 256
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=1.3e-30 Score=281.61 Aligned_cols=265 Identities=24% Similarity=0.356 Sum_probs=197.4
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (697)
.++|++.+.||.|+||.||+|.+..+++.||+|.+.... .......+|+.+++.++ ||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~------h~~i~~~~~~~~~~~~~ 77 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLD------HDNIVKVYEVLGPSGSD 77 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcC------CCcchhhHhhhcccccc
Confidence 579999999999999999999999999999999986533 33456778888888774 78999999776543
Q ss_pred -----------CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc
Q 005415 489 -----------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY 557 (697)
Q Consensus 489 -----------~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~ 557 (697)
...++||||++++|.+++... .+++..++.++.||+.||.|||+.||+||||||+||+++.
T Consensus 78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~- 149 (342)
T cd07854 78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT- 149 (342)
T ss_pred cccccccccccceEEEEeecccccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-
Confidence 357999999998877666421 2788999999999999999999999999999999999975
Q ss_pred CcceEEEeeCCCccccccc------cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHH
Q 005415 558 QRCEIKIIDLGSSCFQTDN------LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILA 630 (697)
Q Consensus 558 ~~~~vKL~DFGla~~~~~~------~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~ 630 (697)
.++.++|+|||.+...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.
T Consensus 150 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~ 229 (342)
T cd07854 150 EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ 229 (342)
T ss_pred CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 3567899999998654321 122356788999998754 458889999999999999999999999888877777
Q ss_pred HHHHhhCCCCHHHHhhccc-ccccc-----cC-------CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 631 RIIGMLGPIDLEMLMQGQE-IYKYF-----TK-------EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 631 ~I~~~lg~~p~e~~~~~~~-~~~~~-----~~-------~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
.+.........+....... ..... .. ...+..-..+...+.+...|..|.++++++ +|+.-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 230 LILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred HHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 7766554433322211100 00000 00 001112222333444445588899999999 99973
No 257
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=2.2e-30 Score=272.27 Aligned_cols=252 Identities=18% Similarity=0.231 Sum_probs=190.6
Q ss_pred eecCceEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~-----~~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~ 483 (697)
+..++|++.+.||+|+||.||+|.++ ..+..||+|.+..... ....+.+|+.+++.++ ||||+++++
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~ 76 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT------CHHVVRLLG 76 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCC------CCCeeeEEE
Confidence 44578999999999999999999754 2356899998875432 2234556777776654 789999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHHhhhcc----CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC
Q 005415 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQES----GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ 558 (697)
Q Consensus 484 ~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~----~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~ 558 (697)
++......++||||+. ++|.+++...... .+...++...+..++.|++.||.|||+++|+||||||+||+++.
T Consensus 77 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~-- 154 (288)
T cd05061 77 VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH-- 154 (288)
T ss_pred EEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC--
Confidence 9999999999999997 6777777543211 11233567788999999999999999999999999999999995
Q ss_pred cceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHH
Q 005415 559 RCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARI 632 (697)
Q Consensus 559 ~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I 632 (697)
++.++|+|||+++...... ....++..|+|||.+.+..++.++|+|||||++|||++ |..||.+....+.+..+
T Consensus 155 ~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~ 234 (288)
T cd05061 155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 234 (288)
T ss_pred CCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 7889999999986543221 11234567999999998889999999999999999999 89999888777766655
Q ss_pred HHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 633 IGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 633 ~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
..... ++. .-.....+..++..||... |..|++++++.
T Consensus 235 ~~~~~-~~~-----------~~~~~~~~~~li~~~l~~~----p~~Rps~~~ll 272 (288)
T cd05061 235 MDGGY-LDQ-----------PDNCPERVTDLMRMCWQFN----PKMRPTFLEIV 272 (288)
T ss_pred HcCCC-CCC-----------CCCCCHHHHHHHHHHcCCC----hhHCcCHHHHH
Confidence 43211 110 0112346777888887765 66777887776
No 258
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=1.8e-30 Score=272.67 Aligned_cols=255 Identities=23% Similarity=0.319 Sum_probs=197.8
Q ss_pred cCceEEEEEeccCCCCceEEEEECCC-----CcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~-----g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
.++|++.+.||+|+||.||++.+... ...+|+|++.... .....+.+|+.+++.+. +|+||+++++++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~~~~~ 85 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLGVC 85 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc-----CCCCeeeEEEEE
Confidence 46899999999999999999987643 3789999987532 23345778888888773 378999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccc
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI 554 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~----------~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl 554 (697)
......+++|||+. ++|..++..... ......+++..+..++.|++.||.|||+.+|+||||||+||++
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 99999999999997 567777653210 0122348899999999999999999999999999999999999
Q ss_pred cccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHH
Q 005415 555 KSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMI 628 (697)
Q Consensus 555 ~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~ 628 (697)
+. ++.+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus 166 ~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 243 (293)
T cd05053 166 TE--DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 243 (293)
T ss_pred cC--CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH
Confidence 85 7899999999987644321 11223567999999998889999999999999999998 9999998877766
Q ss_pred HHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 629 l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
...+...... .........+..++..||... |..|.|++++...|.
T Consensus 244 ~~~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~----p~~Rps~~eil~~l~ 289 (293)
T cd05053 244 FKLLKEGYRM------------EKPQNCTQELYHLMRDCWHEV----PSQRPTFKQLVEDLD 289 (293)
T ss_pred HHHHHcCCcC------------CCCCCCCHHHHHHHHHHcccC----cccCcCHHHHHHHHH
Confidence 6655332111 111233456778888888755 778899988885553
No 259
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=1.6e-30 Score=266.46 Aligned_cols=246 Identities=26% Similarity=0.315 Sum_probs=193.4
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~------~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+|+..+.||+|++|+||+|.+..+++.|++|.+.... .....+.+|+.+++.++ |+||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~ 74 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ------HPNIVQYLGTEREE 74 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC------CCCchheeeeEecC
Confidence 5788899999999999999998899999999986532 23456777888877764 78999999999999
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
...++||||+++ +|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.+||+||
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~--~~~~kl~d~ 146 (258)
T cd06632 75 DNLYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT--NGVVKLADF 146 (258)
T ss_pred CeEEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccC
Confidence 999999999975 6666664322 2788899999999999999999999999999999999985 788999999
Q ss_pred CCccccccc--cccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 568 GSSCFQTDN--LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 568 Gla~~~~~~--~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
|.+...... .....++..|+|||.+.... ++.++|+|||||++|+|++|+.||........+..+......+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---- 222 (258)
T cd06632 147 GMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPP---- 222 (258)
T ss_pred ccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCC----
Confidence 988654332 23456788899999998776 89999999999999999999999987765555544432111110
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
... .....+..++..||.. .|..|.+++++. +||
T Consensus 223 -----~~~--~~~~~~~~li~~~l~~----~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 223 -----IPD--HLSDEAKDFILKCLQR----DPSLRPTAAELLEHPFV 258 (258)
T ss_pred -----cCC--CcCHHHHHHHHHHhhc----CcccCcCHHHHhcCCCC
Confidence 000 1234566667777664 588899999988 775
No 260
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=2.1e-30 Score=271.48 Aligned_cols=249 Identities=23% Similarity=0.326 Sum_probs=184.7
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 005415 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmE 496 (697)
.||+|+||.||+|.+..+++.||+|++..... .......|..+++.++. ..||+|+++++++......++|||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~v~e 77 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMSYAFHTPDKLSFILD 77 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh---CCCCcEeeeeeeeecCCEEEEEEe
Confidence 38999999999999999999999999875321 11223445555555543 358999999999999999999999
Q ss_pred ccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccc
Q 005415 497 LLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 497 yl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~ 575 (697)
|+.++ |...+... ..+++..+..++.|++.||.|||+.+|+||||||+||+++. ++.++|+|||++.....
T Consensus 78 ~~~g~~L~~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~--~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 78 LMNGGDLHYHLSQH------GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSK 149 (278)
T ss_pred cCCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC--CCCEEEccCcCccccCc
Confidence 99854 54444322 13899999999999999999999999999999999999985 77899999999865432
Q ss_pred -ccccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 576 -NLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAV---VMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 576 -~~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~---~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
......++..|+|||++.+. .++.++||||+||++|+|++|+.||..... ......+... .+. .
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~---------~ 218 (278)
T cd05606 150 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--AVE---------L 218 (278)
T ss_pred cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc--CCC---------C
Confidence 22345788999999999754 588999999999999999999999976532 2221111110 000 0
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccCCCCC
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGIDQNKI 697 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~~n~~ 697 (697)
.. .....+..++..|+.. .+..|. +++++. +|+...++|.+
T Consensus 219 ~~--~~s~~~~~li~~~l~~----~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~ 266 (278)
T cd05606 219 PD--SFSPELRSLLEGLLQR----DVNRRLGCLGRGAQEVKEHPFFRSLDWQMV 266 (278)
T ss_pred CC--cCCHHHHHHHHHHhhc----CHHhccCCCCCCHHHHHhCccccCCCchHh
Confidence 00 1123445555555544 466666 898888 99998888754
No 261
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=1.9e-30 Score=274.82 Aligned_cols=256 Identities=23% Similarity=0.346 Sum_probs=199.0
Q ss_pred eecCceEEEEEeccCCCCceEEEEEC-------CCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDL-------HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~-------~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l 481 (697)
+...+|++.+.||+|+||.||+|++. ..+..||+|.+... ......+.+|+.+++.+. +||||+++
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~ 86 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINL 86 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc-----cCCCchhe
Confidence 44678999999999999999999753 23457999998753 233456788988888773 37899999
Q ss_pred EEEEEecCeEEEEEEccc-cchHHHHHhhhccC----------CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCc
Q 005415 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQESG----------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 550 (697)
Q Consensus 482 ~~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~----------~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~ 550 (697)
++++......++||||+. ++|.+++....... ....+++..+..++.||+.||.|||++||+||||||+
T Consensus 87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 166 (304)
T cd05101 87 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAAR 166 (304)
T ss_pred eEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccc
Confidence 999999999999999997 47777776432211 1123788889999999999999999999999999999
Q ss_pred cccccccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc
Q 005415 551 NILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDA 624 (697)
Q Consensus 551 NILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~ 624 (697)
||+++. ++.+||+|||.+....... ....+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.+
T Consensus 167 Nili~~--~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 167 NVLVTE--NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred eEEEcC--CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 999985 7889999999987653221 11234567999999998889999999999999999998 899998888
Q ss_pred HHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 625 VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 625 ~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
..+....+...... .........+..++..||... |..|.+++++...|
T Consensus 245 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~li~~cl~~~----p~~Rps~~e~l~~l 293 (304)
T cd05101 245 VEELFKLLKEGHRM------------DKPANCTNELYMMMRDCWHAI----PSHRPTFKQLVEDL 293 (304)
T ss_pred HHHHHHHHHcCCcC------------CCCCCCCHHHHHHHHHHcccC----hhhCCCHHHHHHHH
Confidence 77766665332111 111234567888889999754 78888888887433
No 262
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.97 E-value=1.4e-30 Score=288.22 Aligned_cols=255 Identities=21% Similarity=0.257 Sum_probs=192.7
Q ss_pred cCceEEEEEeccCCCCceEEEEECCC-----CcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~-----g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
.++|++.++||.|+||.||+|.+... +..||||+++... .....+.+|+.+++.+. .||||+++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~-----~HpnIv~l~~~~ 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-----PHLNIVNLLGAC 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC-----CCCCeeeEEEEE
Confidence 46899999999999999999987433 3579999997532 33456788999988874 389999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhcc----------------------------------------------------
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQES---------------------------------------------------- 512 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~~---------------------------------------------------- 512 (697)
.....++|||||+. ++|.+++......
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 99999999999997 5677666543210
Q ss_pred --------------------------------------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccc
Q 005415 513 --------------------------------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILI 554 (697)
Q Consensus 513 --------------------------------------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl 554 (697)
.....+++..+..++.||+.||.|||+.+|+||||||+|||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill 270 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence 001237788889999999999999999999999999999999
Q ss_pred cccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHH
Q 005415 555 KSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMI 628 (697)
Q Consensus 555 ~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~ 628 (697)
+. ++.+||+|||++....... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||........
T Consensus 271 ~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 271 AQ--GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred eC--CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 85 7789999999987543221 12345678999999999899999999999999999997 9999987654433
Q ss_pred HHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 629 l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
+...+.....++. .-.....+..++..||... |..|+++.++...|
T Consensus 349 ~~~~~~~~~~~~~-----------~~~~~~~l~~li~~cl~~d----P~~RPt~~~l~~~l 394 (400)
T cd05105 349 FYNKIKSGYRMAK-----------PDHATQEVYDIMVKCWNSE----PEKRPSFLHLSDIV 394 (400)
T ss_pred HHHHHhcCCCCCC-----------CccCCHHHHHHHHHHCccC----HhHCcCHHHHHHHH
Confidence 3332222111110 1123346778888888765 77788887776444
No 263
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.97 E-value=6.7e-31 Score=283.96 Aligned_cols=257 Identities=23% Similarity=0.277 Sum_probs=193.0
Q ss_pred ecCceEEEEEeccCCCCceEEEEECC-----CCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~-----~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~ 484 (697)
-..+|++.+.||.|+||.||+|.+.. +++.||+|+++... .....+..|+.+++.+. +|+||++++++
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~-----~h~niv~~~~~ 79 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-----HHLNVVNLLGA 79 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc-----cCcchhheeee
Confidence 34689999999999999999997533 45789999987432 23356677888888773 37899999998
Q ss_pred EEec-CeEEEEEEcccc-chHHHHHhhhccC-------------------------------------------------
Q 005415 485 FYHL-EHLFIVCELLRA-NLYEFQKFNQESG------------------------------------------------- 513 (697)
Q Consensus 485 f~~~-~~l~LVmEyl~g-sL~~~l~~~~~~~------------------------------------------------- 513 (697)
+... ..++++|||+.+ +|.+++.......
T Consensus 80 ~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 80 CTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred EecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 8754 678999999985 6666664322100
Q ss_pred ------CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccccc-----ccccc
Q 005415 514 ------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQ 582 (697)
Q Consensus 514 ------~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~g 582 (697)
....+++..+..++.||+.||.|||+++|+||||||+|||++. ++.++|+|||++....... ....+
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~~~~~~~~~~~~~~ 237 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGDARL 237 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcccCcchhhccCCCC
Confidence 0124788999999999999999999999999999999999985 7889999999987643221 12344
Q ss_pred cCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhh
Q 005415 583 SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLY 661 (697)
Q Consensus 583 t~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~ 661 (697)
+..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...+...-.+. .. -.....+.
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---------~~--~~~~~~~~ 306 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR---------AP--EYATPEIY 306 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC---------CC--ccCCHHHH
Confidence 678999999999999999999999999999998 9999987654444433322111110 00 11234677
Q ss_pred hhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 662 YINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 662 ~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
.++..||+.. |..|+++++++..|.
T Consensus 307 ~l~~~cl~~~----p~~RPs~~ell~~l~ 331 (337)
T cd05054 307 SIMLDCWHNN----PEDRPTFSELVEILG 331 (337)
T ss_pred HHHHHHccCC----hhhCcCHHHHHHHHH
Confidence 8888888755 778999999886654
No 264
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=2.7e-30 Score=265.48 Aligned_cols=246 Identities=20% Similarity=0.307 Sum_probs=195.8
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
.+|++.+.||.|+||.||++.+. .+..+|+|++.........+.+|+++++.++ ||||+++++++......++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLS------HPKLVQLYGVCTERSPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCC------CCCeeeEEEEEccCCceEE
Confidence 47899999999999999999875 4678999998865544567888999998874 7899999999999999999
Q ss_pred EEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
||||+.+ +|.+++..... .+++..+..++.|++.||.+||+.+++|+||||+||+++. ++.++|+|||.+..
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~ 149 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRG-----KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE--NQVVKVSDFGMTRF 149 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC--CCeEEECCCcceee
Confidence 9999985 55555543221 2788899999999999999999999999999999999984 77899999998865
Q ss_pred cccccc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 573 QTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 573 ~~~~~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... ...++..|+|||.+.+..++.++||||||+++|+|++ |..||........+..+.+......+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------ 223 (256)
T cd05112 150 VLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKP------ 223 (256)
T ss_pred cccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCC------
Confidence 433211 1234567999999998889999999999999999998 99999888777766665432221111
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
. .....+..++..||... |..|+++++++.+|
T Consensus 224 ----~--~~~~~~~~l~~~~l~~~----p~~Rp~~~~~l~~l 255 (256)
T cd05112 224 ----R--LASQSVYELMQHCWKER----PEDRPSFSLLLHQL 255 (256)
T ss_pred ----C--CCCHHHHHHHHHHcccC----hhhCCCHHHHHHhh
Confidence 0 02346778888888654 88899999888665
No 265
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=1.8e-30 Score=271.16 Aligned_cols=250 Identities=25% Similarity=0.345 Sum_probs=197.5
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..|++++.||.|+||.||+|.+..++..||+|++.... .....+.+|+.+++.+. ||||+++++++......
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~ 77 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD------SPYVTKYYGSYLKGTKL 77 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEEECCEE
Confidence 46888999999999999999999999999999987532 33456677888777764 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+++ +|.+++... .+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus 78 ~lv~e~~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~--~~~~~l~dfg~~ 148 (277)
T cd06640 78 WIIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE--QGDVKLADFGVA 148 (277)
T ss_pred EEEEecCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcC--CCCEEEcccccc
Confidence 999999975 566655421 2788889999999999999999999999999999999985 778999999998
Q ss_pred cccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... .....++..|+|||++.+..++.++|+|||||++|+|++|..||...........+.... ++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~------ 221 (277)
T cd06640 149 GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-PPTL------ 221 (277)
T ss_pred eeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC-CCCC------
Confidence 654432 222456788999999998889999999999999999999999998776655544432211 1110
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
. ......+..++..||.. .|..|++++++. +|+.....
T Consensus 222 ---~--~~~~~~~~~li~~~l~~----~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 222 ---T--GEFSKPFKEFIDACLNK----DPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred ---c--hhhhHHHHHHHHHHccc----CcccCcCHHHHHhChHhhhcch
Confidence 0 01234566777778764 488899999998 88875544
No 266
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.5e-32 Score=292.81 Aligned_cols=207 Identities=24% Similarity=0.379 Sum_probs=181.2
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
.|.-++.||.|+||.||-|+|..+.+.||||.+..+ ......++.|+++|+.++ |||++.+-++|.....
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~------HPntieYkgCyLre~T 100 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR------HPNTIEYKGCYLREHT 100 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc------CCCcccccceeeccch
Confidence 355567799999999999999999999999998743 334467788999998886 8999999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
.|||||||-|+-.+++.-.+.. +.+.++..|..+.+.||+|||+.+.||||||..|||++. .|.|||+|||++
T Consensus 101 aWLVMEYClGSAsDlleVhkKp-----lqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse--~g~VKLaDFGSA 173 (948)
T KOG0577|consen 101 AWLVMEYCLGSASDLLEVHKKP-----LQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSE--PGLVKLADFGSA 173 (948)
T ss_pred HHHHHHHHhccHHHHHHHHhcc-----chHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecC--CCeeeeccccch
Confidence 9999999998877777655543 888999999999999999999999999999999999994 999999999998
Q ss_pred cccccccccccccCCCCCchhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Q 005415 571 CFQTDNLCLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 571 ~~~~~~~~~~~gt~~Y~APE~l~~---~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~ 635 (697)
.... +...++|||+|||||+|+. +.|+-++||||||++..||.-.++|+-+-+....+..|.+.
T Consensus 174 si~~-PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN 240 (948)
T KOG0577|consen 174 SIMA-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 240 (948)
T ss_pred hhcC-chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc
Confidence 7554 3456899999999999974 46999999999999999999999999888888888887653
No 267
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=2.2e-30 Score=272.30 Aligned_cols=252 Identities=23% Similarity=0.306 Sum_probs=195.4
Q ss_pred ceEEEEEeccCCCCceEEEEECC-----CCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~-----~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
+|++.+.||+|+||.||+|.+.. ....+++|.+.... .....+.+|+.+++.++ ||||+++++.+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~ 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN------HPHVIKLYGACSQ 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCC------CCCEeeEEEEEec
Confidence 47889999999999999998743 23578999887543 23456778888888774 8899999999999
Q ss_pred cCeEEEEEEccc-cchHHHHHhhhcc------------------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCC
Q 005415 488 LEHLFIVCELLR-ANLYEFQKFNQES------------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (697)
Q Consensus 488 ~~~l~LVmEyl~-gsL~~~l~~~~~~------------------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLK 548 (697)
....++||||+. ++|.+++...... .....+++..+..++.|++.||.|||+++|+|||||
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 999999999998 5676666532211 112347888999999999999999999999999999
Q ss_pred CccccccccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 005415 549 PENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPN 622 (697)
Q Consensus 549 P~NILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~ 622 (697)
|+|||++. ++.+||+|||++....... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+
T Consensus 155 p~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 155 ARNVLVAE--GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hheEEEcC--CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999985 7889999999986543221 12234678999999988889999999999999999999 9999998
Q ss_pred CcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 623 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 623 ~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
.........+......+.+ ......+..++..||+.. |..|.++.++..+|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~cl~~~----P~~Rp~~~~i~~~l~ 284 (290)
T cd05045 233 IAPERLFNLLKTGYRMERP------------ENCSEEMYNLMLTCWKQE----PDKRPTFADISKELE 284 (290)
T ss_pred CCHHHHHHHHhCCCCCCCC------------CCCCHHHHHHHHHHccCC----cccCCCHHHHHHHHH
Confidence 8777665554332211111 122357788888888754 888999999986664
No 268
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=2.2e-30 Score=266.34 Aligned_cols=249 Identities=28% Similarity=0.358 Sum_probs=199.0
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.|++.+.||.|++|.||+|.+..+++.|+||++.... .....+..|+.++..++ |+||+++++++......+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 75 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE------SPYVVKCYGAFYKEGEIS 75 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC------CCCeeeEEEEEccCCeEE
Confidence 6899999999999999999999999999999987653 34566778888888775 789999999999999999
Q ss_pred EEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 493 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 493 LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
+||||+. ++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++. ++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~--~~~~~l~df~~~ 147 (264)
T cd06623 76 IVLEYMDGGSLADLLKKV------GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS--KGEVKIADFGIS 147 (264)
T ss_pred EEEEecCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC--CCCEEEccCccc
Confidence 9999998 6677776543 228899999999999999999999 99999999999999985 788999999988
Q ss_pred cccccccc---cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHhhCCCCHHHH
Q 005415 571 CFQTDNLC---LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA---VVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 571 ~~~~~~~~---~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~---~~e~l~~I~~~lg~~p~e~~ 644 (697)
........ ...++..|+|||.+.+..++.++|+||||+++|+|++|+.||.... ..+....+... .....
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~- 223 (264)
T cd06623 148 KVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDG---PPPSL- 223 (264)
T ss_pred eecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcC---CCCCC-
Confidence 76543222 3467888999999998889999999999999999999999997763 33334333311 11000
Q ss_pred hhccccccccc-CCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 645 MQGQEIYKYFT-KEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 645 ~~~~~~~~~~~-~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
. .. ....+..++..||. ..+..|+++++++ +|+..++
T Consensus 224 ------~--~~~~~~~l~~li~~~l~----~~p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 224 ------P--AEEFSPEFRDFISACLQ----KDPKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred ------C--cccCCHHHHHHHHHHcc----CChhhCCCHHHHHhCHHHHhcc
Confidence 0 01 22456666666665 3588999999999 9987654
No 269
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=3.1e-30 Score=266.52 Aligned_cols=251 Identities=24% Similarity=0.309 Sum_probs=196.1
Q ss_pred ceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 410 ~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++..++|++.++||+|+||.||++.+. .+..+|+|.+.........+.+|+.+++.++ |+||+++++.+.. .
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~-~ 73 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ------HDKLVKLHAVVTK-E 73 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcC------CCCcceEEEEEcC-C
Confidence 355689999999999999999999854 5567999998876555567888999988775 7899999999887 7
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..+++|||++ ++|.+++..... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++. .+.++|+|||
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~--~~~~~l~d~~ 147 (260)
T cd05073 74 PIYIITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA--SLVCKIADFG 147 (260)
T ss_pred CeEEEEEeCCCCcHHHHHHhCCc----cccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCCc
Confidence 7899999997 577777754321 23788889999999999999999999999999999999985 7899999999
Q ss_pred Cccccccccc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 569 SSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 569 la~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
.+........ ...++..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+.......+......+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--- 224 (260)
T cd05073 148 LARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--- 224 (260)
T ss_pred ceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCC---
Confidence 8865433211 1234567999999998889999999999999999999 9999998877666665543221110
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
.-.....+..++..||... |..|.++.++..-|.
T Consensus 225 ---------~~~~~~~~~~~i~~~l~~~----p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 225 ---------PENCPEELYNIMMRCWKNR----PEERPTFEYIQSVLD 258 (260)
T ss_pred ---------cccCCHHHHHHHHHHcccC----cccCcCHHHHHHHHh
Confidence 0112335666777776544 788889888876554
No 270
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=4.1e-31 Score=276.26 Aligned_cols=250 Identities=18% Similarity=0.201 Sum_probs=192.3
Q ss_pred CceEEEEEeccCCCCceEEEEECC-----CCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~-----~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
.+|++.+.||.|+||.||+|.+.. .+..||||+++.... ....+..|+.++..++ ||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~------h~~iv~~~~~~~ 78 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQ------HPNIVCLLGVVT 78 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCC------CCCcCeEEEEEc
Confidence 457888999999999999998754 357899999975432 2345667777776654 889999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhc----------cCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccc
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQE----------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~----------~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~ 555 (697)
.....++++||+. ++|.+++..... ......+++..+..++.|++.||.|||++||+||||||+||+++
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 9999999999997 456666642211 01122378888999999999999999999999999999999998
Q ss_pred ccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHH
Q 005415 556 SYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMIL 629 (697)
Q Consensus 556 ~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l 629 (697)
. ++.+||+|||+++...... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....+.+
T Consensus 159 ~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 159 D--KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI 236 (283)
T ss_pred C--CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 4 7789999999986543221 12344678999999988889999999999999999998 99999988887777
Q ss_pred HHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 630 ARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 630 ~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
..+......+.. -.....+..++..||+.. |..|++++++..
T Consensus 237 ~~i~~~~~~~~~------------~~~~~~~~~li~~cl~~~----p~~RP~~~~i~~ 278 (283)
T cd05091 237 EMIRNRQVLPCP------------DDCPAWVYTLMLECWNEF----PSRRPRFKDIHS 278 (283)
T ss_pred HHHHcCCcCCCC------------CCCCHHHHHHHHHHhCCC----cccCCCHHHHHH
Confidence 776543221110 123446778889999877 666777777663
No 271
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=1.8e-30 Score=270.29 Aligned_cols=255 Identities=26% Similarity=0.392 Sum_probs=200.1
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.|++.+.||.|+||.||+|.+..+++.||+|.++.. ......+.+|+.+++.+.. ..|||++++++++......+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ---SQPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc---CCCCCeeeEeeeeeeCCEEE
Confidence 478899999999999999999999999999998753 3334567789999998865 35899999999999999999
Q ss_pred EEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||+.+ +|.+++... .+++..+..++.|++.||.|||+.||+|+||+|+||+++. .+.++|+|||++.
T Consensus 79 lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~ 149 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN--TGNVKLCDFGVAA 149 (277)
T ss_pred EEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC--CCCEEEccCCcee
Confidence 99999975 565555321 2889999999999999999999999999999999999995 7889999999987
Q ss_pred ccccc---cccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
..... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.........+... . +.....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~-- 224 (277)
T cd06917 150 LLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-K--PPRLED-- 224 (277)
T ss_pred ecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-C--CCCCCc--
Confidence 65432 223467888999999865 44788999999999999999999999877654433322111 1 111100
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCCC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQNK 696 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n~ 696 (697)
......+..++..||... |..|.++++++ +|+.....++
T Consensus 225 ------~~~~~~~~~~i~~~l~~~----p~~R~~~~~il~~~~~~~~~~~~ 265 (277)
T cd06917 225 ------NGYSKLLREFVAACLDEE----PKERLSAEELLKSKWIKAHSKTP 265 (277)
T ss_pred ------ccCCHHHHHHHHHHcCCC----cccCcCHHHHhhChHhhccccCc
Confidence 012346677777777654 88899999998 9997766553
No 272
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=7.7e-31 Score=299.56 Aligned_cols=201 Identities=29% Similarity=0.457 Sum_probs=171.0
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEe-cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-e---
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-H--- 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~-~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~-~--- 487 (697)
..+++|.+.|.+|||+.||+|++...|..||+|++- .++...+...+||.+++.|. +|+|||.+++... .
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~-----gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS-----GHKNIVSYIDSSAINRSS 110 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc-----CCCceeeEeccccccccC
Confidence 468999999999999999999998888999999764 56777788999999999997 4899999999432 1
Q ss_pred ---cCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcC--ccccCCCCccccccccCcce
Q 005415 488 ---LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCE 561 (697)
Q Consensus 488 ---~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~g--IvHrDLKP~NILl~~~~~~~ 561 (697)
.-.++|+||||. ++|.+++..+.... |++.++++|+.|+++|+++||.++ |||||||-+||||.. ++.
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~----lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~--~g~ 184 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTR----LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA--DGN 184 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhcc----CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC--CCC
Confidence 135789999999 69999997654433 999999999999999999999997 999999999999995 889
Q ss_pred EEEeeCCCccccccccc------------cccccCCCCCchhh---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc
Q 005415 562 IKIIDLGSSCFQTDNLC------------LYVQSRSYRAPEVI---IGLPYDQKIDLWSLGCILAELWTGEVLFPNDA 624 (697)
Q Consensus 562 vKL~DFGla~~~~~~~~------------~~~gt~~Y~APE~l---~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~ 624 (697)
.||||||.+.-...... ....|+.|+|||++ .+.+.+.|+|||+|||+||.||....||....
T Consensus 185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg 262 (738)
T KOG1989|consen 185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG 262 (738)
T ss_pred EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc
Confidence 99999999864332221 12458999999987 57789999999999999999999999997653
No 273
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1.1e-30 Score=271.05 Aligned_cols=246 Identities=27% Similarity=0.392 Sum_probs=197.6
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|.+.+.||+|++|.||+|.+..+++.||+|++... ......+..|..+++.++ +||||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-----GHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-----cCCCchhHHHHhcCCc
Confidence 4799999999999999999999999999999998753 222345667777777764 4889999999999999
Q ss_pred eEEEEEEcc-ccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELL-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl-~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..++|||++ .++|.+++.... .+++..++.++.|++.||.+||+.|++|+||+|+||+++. ++.++|+|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~--~~~~~l~df~ 147 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDK--DMHIKITDFG 147 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEecCCc
Confidence 999999999 567777775432 2899999999999999999999999999999999999985 7889999999
Q ss_pred Ccccccccc-----------------------ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH
Q 005415 569 SSCFQTDNL-----------------------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV 625 (697)
Q Consensus 569 la~~~~~~~-----------------------~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~ 625 (697)
++....... ....++..|+|||.+.+..++.++|+||||++++++++|+.||...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 886543321 123567889999999888899999999999999999999999998876
Q ss_pred HHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCH----HHHH--Hhh
Q 005415 626 VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTL----EYAA--LWL 689 (697)
Q Consensus 626 ~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~----e~~~--~wl 689 (697)
...+..+......++.. ....+..++..||.. .|..|.+. ++++ +|+
T Consensus 228 ~~~~~~~~~~~~~~~~~-------------~~~~~~~li~~~l~~----~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 228 YLTFQKILKLEYSFPPN-------------FPPDAKDLIEKLLVL----DPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHHHhcCCCCCCc-------------cCHHHHHHHHHHhcC----CHhhCCCcccCHHHHhcCCCC
Confidence 66666655333222221 134566677777754 47778888 8887 664
No 274
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5e-32 Score=277.50 Aligned_cols=215 Identities=26% Similarity=0.358 Sum_probs=182.7
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
-++|..+++||+|.||+|-+++.+.+++.+|||++++. +.....-+.|-++|+..+ ||.+..|--.|+..
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~------HPFLt~LKYsFQt~ 240 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR------HPFLTSLKYSFQTQ 240 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc------CcHHHHhhhhhccC
Confidence 45688899999999999999999999999999999864 344556667778887764 88999999999999
Q ss_pred CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 489 ~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
+++|+||||..|+-+-+..... ..+++...+.+...|+.||.|||+++||.||||.+|+|++. +|++||+|||
T Consensus 241 drlCFVMeyanGGeLf~HLsre-----r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDk--DGHIKitDFG 313 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLSRE-----RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDK--DGHIKITDFG 313 (516)
T ss_pred ceEEEEEEEccCceEeeehhhh-----hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheecc--CCceEeeecc
Confidence 9999999999865332222222 22899999999999999999999999999999999999995 9999999999
Q ss_pred Cccc---cccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 569 SSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 569 la~~---~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
+++. .+....+++|||.|+|||++....|+.++|.|.+||++|||++|+.||.+.+...++..|+-.--.+|
T Consensus 314 LCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFP 388 (516)
T KOG0690|consen 314 LCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFP 388 (516)
T ss_pred cchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCC
Confidence 9965 34456779999999999999999999999999999999999999999999888777777654333333
No 275
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=3.2e-30 Score=267.47 Aligned_cols=248 Identities=21% Similarity=0.253 Sum_probs=194.4
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCC---cEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTG---VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g---~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
.++|++.+.||+|+||.||+|.+..++ ..+|+|.++... .....+..|+.+++.++ ||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 76 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD------HPNIIHLEGVVTK 76 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEec
Confidence 368999999999999999999876544 379999886532 23456677888887763 8899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
.+..++||||+++ +|.+++.... ..+++..+..++.|++.||.|||+++++||||||+|||++. ++.++|+|
T Consensus 77 ~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~~l~d 149 (267)
T cd05066 77 SKPVMIVTEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS--NLVCKVSD 149 (267)
T ss_pred CCccEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC--CCeEEeCC
Confidence 9999999999975 6666665332 12788999999999999999999999999999999999985 78899999
Q ss_pred CCCccccccccc------cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 567 LGSSCFQTDNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 567 FGla~~~~~~~~------~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
||++........ ...++..|+|||.+.+..++.++|+|||||++|++++ |..||......+.+..+.+....+
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~ 229 (267)
T cd05066 150 FGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLP 229 (267)
T ss_pred CCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCC
Confidence 999876543221 1122457999999998889999999999999999887 999998887777666665432211
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
. .......+..++..||... +..|++++++..-|
T Consensus 230 ~------------~~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~~~l 263 (267)
T cd05066 230 A------------PMDCPAALHQLMLDCWQKD----RNERPKFEQIVSIL 263 (267)
T ss_pred C------------CCCCCHHHHHHHHHHcccC----chhCCCHHHHHHHH
Confidence 1 1123456778888888765 77888888877433
No 276
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=3.2e-30 Score=266.58 Aligned_cols=246 Identities=21% Similarity=0.269 Sum_probs=190.4
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-------~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
+|++.+.||+|+||.||+|.+ .+++.+|+|.+.... .....+.+|+.+++.++ |+||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK------HVNIVQYLGTCLD 73 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC------CCCEeeEeeEeec
Confidence 588899999999999999986 578899999987432 12345667777777764 7899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
....++||||+.+ +|.+++.... .+++..++.++.|++.||.|||+.+|+|+||+|+||+++. ++.++|+|
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l~d 145 (265)
T cd06631 74 DNTISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMP--NGIIKLID 145 (265)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECC--CCeEEecc
Confidence 9999999999975 6666664322 2788999999999999999999999999999999999985 78899999
Q ss_pred CCCcccccc---------ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 567 LGSSCFQTD---------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 567 FGla~~~~~---------~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
||++..... ......++..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+....+
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG 225 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC
Confidence 998865321 11234578899999999988899999999999999999999999987665544444433222
Q ss_pred CCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 638 ~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
..+. ... .....+..+++.||... |..|.++++++ +|+
T Consensus 226 ~~~~--------~~~--~~~~~~~~~i~~~l~~~----p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 226 LMPR--------LPD--SFSAAAIDFVTSCLTRD----QHERPSALQLLRHDFL 265 (265)
T ss_pred CCCC--------CCC--CCCHHHHHHHHHHhcCC----cccCCCHHHHhcCCCC
Confidence 2111 000 12335566666666544 78889999988 775
No 277
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=3.5e-30 Score=265.22 Aligned_cols=247 Identities=28% Similarity=0.402 Sum_probs=191.9
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~---~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
||++.+.||+|+||.||++.+..+++.|++|.++.... ....+.+|+.+++.++ |+||+++++.+......
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~------~~~i~~~~~~~~~~~~~ 74 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK------HPNLVKYYGVEVHREKV 74 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCC------CCChhheeeeEecCCEE
Confidence 69999999999999999999988999999999986433 4567788888888774 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++|+||+.+ +|.+.+.... .+++..++.++.|++.||.|||+.||+|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~kl~d~g~~ 146 (264)
T cd06626 75 YIFMEYCSGGTLEELLEHGR------ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH--NGVIKLGDFGCA 146 (264)
T ss_pred EEEEecCCCCcHHHHHhhcC------CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEcccccc
Confidence 999999974 5666554321 2778889999999999999999999999999999999995 788999999998
Q ss_pred cccccccc-------cccccCCCCCchhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHHhhCCC
Q 005415 571 CFQTDNLC-------LYVQSRSYRAPEVIIGLP---YDQKIDLWSLGCILAELWTGEVLFPNDAVV-MILARIIGMLGPI 639 (697)
Q Consensus 571 ~~~~~~~~-------~~~gt~~Y~APE~l~~~~---~s~ksDIWSLGviL~ELltG~~PF~~~~~~-e~l~~I~~~lg~~ 639 (697)
........ ...++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...... .....+.. +..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~ 224 (264)
T cd06626 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA--GHK 224 (264)
T ss_pred cccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc--CCC
Confidence 76543211 235678899999998766 889999999999999999999999765333 33322222 111
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
+. ..........+..++..||.. .|..|.++++++ +||
T Consensus 225 ~~--------~~~~~~~~~~~~~li~~~l~~----~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 225 PP--------IPDSLQLSPEGKDFLDRCLES----DPKKRPTASELLQHPFV 264 (264)
T ss_pred CC--------CCcccccCHHHHHHHHHHccC----CcccCCCHHHHhcCCCC
Confidence 10 111111234455666666654 488899999988 876
No 278
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=1.9e-30 Score=265.50 Aligned_cols=246 Identities=24% Similarity=0.293 Sum_probs=194.0
Q ss_pred EEeccCCCCceEEEEECCC---CcEEEEEEEecchhh--hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~---g~~VAVKii~~~~~~--~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
+.||+|+||.||+|.+... +..|++|+++..... ...+.+|+.+++.++ |+||+++++++......++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG------HPNVVRLLGVCTEEEPLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC------CCChheeeeeecCCCceEEE
Confidence 4689999999999998766 899999999865432 467778888888774 78999999999999999999
Q ss_pred EEccc-cchHHHHHhhhcc---CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 495 CELLR-ANLYEFQKFNQES---GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 495 mEyl~-gsL~~~l~~~~~~---~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
|||+. ++|.+++...... .....+++..+..++.|++.||.|||+++++|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~ 152 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE--DLVVKISDFGLS 152 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECC--CCcEEEcccccc
Confidence 99994 6777776643210 00123899999999999999999999999999999999999995 689999999998
Q ss_pred cccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 571 CFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 571 ~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
...... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||......+....+.......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----- 227 (262)
T cd00192 153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLP----- 227 (262)
T ss_pred cccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC-----
Confidence 765543 223456788999999998889999999999999999999 699999988777777665411100
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
........+..++..||... +..|++++++...|
T Consensus 228 -------~~~~~~~~~~~li~~~l~~~----p~~Rps~~~l~~~l 261 (262)
T cd00192 228 -------KPEYCPDELYELMLSCWQLD----PEDRPTFSELVERL 261 (262)
T ss_pred -------CCccCChHHHHHHHHHccCC----cccCcCHHHHHHhh
Confidence 00112345666777766544 77899999887554
No 279
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=2.5e-30 Score=268.29 Aligned_cols=244 Identities=21% Similarity=0.271 Sum_probs=191.8
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCc---EEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGV---DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~---~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+.|++.+.||+|+||.||+|.+..+++ .||||++... ......+..|+.+++.+. ||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~ 77 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD------HPNIIHLEGVVTKS 77 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC------CcCcceEEEEECCC
Confidence 568999999999999999999877664 6999998753 334457778888888764 88999999999999
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
...++||||+.+ +|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++. ++.++|+||
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~--~~~~kl~df 150 (269)
T cd05065 78 RPVMIITEFMENGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS--NLVCKVSDF 150 (269)
T ss_pred CceEEEEecCCCCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC--CCcEEECCC
Confidence 999999999985 5656654332 12788999999999999999999999999999999999984 788999999
Q ss_pred CCcccccccccc-----cc---ccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCC
Q 005415 568 GSSCFQTDNLCL-----YV---QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 568 Gla~~~~~~~~~-----~~---gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
|++......... .. .+..|+|||.+.+..++.++|||||||++|||++ |..||...+..+....+......
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~ 230 (269)
T cd05065 151 GLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRL 230 (269)
T ss_pred ccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence 988654332111 11 1346999999998899999999999999999987 99999888777766666433221
Q ss_pred CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 639 IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 639 ~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
+.. ......+..++..||... |..|++++++.
T Consensus 231 ~~~------------~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~ 262 (269)
T cd05065 231 PPP------------MDCPTALHQLMLDCWQKD----RNARPKFGQIV 262 (269)
T ss_pred CCc------------ccCCHHHHHHHHHHcCCC----hhhCcCHHHHH
Confidence 111 123456677778888654 77788888877
No 280
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=3.3e-30 Score=265.59 Aligned_cols=243 Identities=23% Similarity=0.248 Sum_probs=189.8
Q ss_pred EEeccCCCCceEEEEECCCC---cEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTG---VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g---~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
++||+|+||.||+|.+...+ ..+|+|.+..... ....+.+|+.+++.+ +|+||+++++++. ....++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~-~~~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL------DHPCIVRLIGVCK-GEPLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc------CCCCeeeEEEEEc-CCceEEE
Confidence 46999999999999876554 7899999886543 445677788888776 4789999999876 4568999
Q ss_pred EEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 495 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 495 mEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
|||+. ++|.+++.... .+++..+..++.|++.||.|||+.+++|+||||+|||++. ++.+||+|||.+...
T Consensus 74 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~--~~~~kl~df~~~~~~ 145 (257)
T cd05060 74 MELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN--RHQAKISDFGMSRAL 145 (257)
T ss_pred EEeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcC--CCcEEecccccccee
Confidence 99987 56777776433 2789999999999999999999999999999999999985 788999999998765
Q ss_pred cccccc------ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 574 TDNLCL------YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 574 ~~~~~~------~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
...... ..++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..+....+.... +.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~------ 218 (257)
T cd05060 146 GAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE-RLP------ 218 (257)
T ss_pred ecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cCC------
Confidence 433221 112357999999998889999999999999999998 999998877766555553321 111
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcccC
Q 005415 647 GQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFGID 693 (697)
Q Consensus 647 ~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~~~ 693 (697)
........+..++..||... |..|+++.++..+|..+.
T Consensus 219 -----~~~~~~~~l~~li~~cl~~~----p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 219 -----RPEECPQEIYSIMLSCWKYR----PEDRPTFSELESTFRRDP 256 (257)
T ss_pred -----CCCCCCHHHHHHHHHHhcCC----hhhCcCHHHHHHHHHhcc
Confidence 11123356777888888754 888999999987776543
No 281
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=1.8e-30 Score=267.08 Aligned_cols=245 Identities=24% Similarity=0.334 Sum_probs=193.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
++|++.+.||+|+||.||++. .+++.||+|.++.... ...+.+|+.+++.++ ||||+++++++... ..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~~-~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDVT-AQAFLEETAVMTKLH------HKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcch-HHHHHHHHHHHHhCC------CCCcCeEEEEEcCC-CcEE
Confidence 579999999999999999986 4788999999875432 356778888887764 78999999998764 5799
Q ss_pred EEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
||||+. ++|.+++..... ..+++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||++..
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~--~~~~kl~Dfg~~~~ 149 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE--DGVAKVSDFGLARV 149 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCcEEECCCcccee
Confidence 999997 577777754322 23788899999999999999999999999999999999985 78899999999876
Q ss_pred cccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 573 QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 573 ~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
..........+..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+..+....+.+.....+.
T Consensus 150 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------- 219 (254)
T cd05083 150 GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPP---------- 219 (254)
T ss_pred ccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCC----------
Confidence 5443333444677999999988889999999999999999998 99999988776665555332211111
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
-.....+..++..||... |..|++++++..+|.
T Consensus 220 --~~~~~~~~~li~~~l~~~----p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 220 --EGCPADVYVLMTSCWETE----PKKRPSFHKLREKLE 252 (254)
T ss_pred --CcCCHHHHHHHHHHcCCC----hhhCcCHHHHHHHHc
Confidence 112346677888888765 667888888876654
No 282
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=3.5e-30 Score=277.06 Aligned_cols=256 Identities=23% Similarity=0.324 Sum_probs=195.9
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCC-------CcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHT-------GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRL 481 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~-------g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l 481 (697)
+...+|++.+.||+|+||.||+|++... ...||+|+++.. ......+.+|+.+++.+. +||||+++
T Consensus 9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~ 83 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG-----KHKNIINL 83 (334)
T ss_pred cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc-----CCCCeeee
Confidence 4456899999999999999999986432 346899988753 233467788999888874 37899999
Q ss_pred EEEEEecCeEEEEEEccc-cchHHHHHhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCc
Q 005415 482 YDYFYHLEHLFIVCELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPE 550 (697)
Q Consensus 482 ~~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~----------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~ 550 (697)
++++.....++++|||+. ++|.+++...... .....+++..+..++.||+.||.|||++||+||||||+
T Consensus 84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 163 (334)
T cd05100 84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR 163 (334)
T ss_pred eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 999999999999999997 4777777543211 11233778889999999999999999999999999999
Q ss_pred cccccccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCc
Q 005415 551 NILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDA 624 (697)
Q Consensus 551 NILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~ 624 (697)
|||++. ++.+||+|||+++...... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+
T Consensus 164 Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 164 NVLVTE--DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred eEEEcC--CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 999985 7889999999987543321 11223467999999999899999999999999999999 999999888
Q ss_pred HHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 625 VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 625 ~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
..+....+....... ........+..++..||... |..|.++++++..|
T Consensus 242 ~~~~~~~~~~~~~~~------------~~~~~~~~l~~li~~cl~~~----p~~Rps~~ell~~l 290 (334)
T cd05100 242 VEELFKLLKEGHRMD------------KPANCTHELYMIMRECWHAV----PSQRPTFKQLVEDL 290 (334)
T ss_pred HHHHHHHHHcCCCCC------------CCCCCCHHHHHHHHHHcccC----hhhCcCHHHHHHHH
Confidence 777666654321111 01122346777788888755 77788888777333
No 283
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=4.2e-30 Score=273.91 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=194.3
Q ss_pred ecCceEEEEEeccCCCCceEEEEECC-------CCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLH-------TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~-------~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~ 482 (697)
...+|.+.+.||+|+||.||+|.+.. ....||+|+++... .....+..|+.+++.+. +||||++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~ 84 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG-----KHKNIINLL 84 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-----CCCCeeeEE
Confidence 34789999999999999999998632 34579999987532 33456778888887763 388999999
Q ss_pred EEEEecCeEEEEEEccc-cchHHHHHhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcc
Q 005415 483 DYFYHLEHLFIVCELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPEN 551 (697)
Q Consensus 483 ~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~----------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~N 551 (697)
+++......++||||+. ++|.+++...... .....+++..+..++.||+.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 99999899999999997 5677777543210 112348889999999999999999999999999999999
Q ss_pred ccccccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcH
Q 005415 552 ILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAV 625 (697)
Q Consensus 552 ILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~ 625 (697)
||++. ++.+||+|||.++...... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus 165 ill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 165 VLVTE--DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred EEEcC--CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 99985 7889999999987543221 11223457999999998889999999999999999999 9999998887
Q ss_pred HHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 626 VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 626 ~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
.+.+..+...... .........+..++..||... |..|++++++...|
T Consensus 243 ~~~~~~~~~~~~~------------~~~~~~~~~l~~li~~cl~~~----p~~Rps~~~ll~~l 290 (314)
T cd05099 243 EELFKLLREGHRM------------DKPSNCTHELYMLMRECWHAV----PTQRPTFKQLVEAL 290 (314)
T ss_pred HHHHHHHHcCCCC------------CCCCCCCHHHHHHHHHHcCCC----cccCcCHHHHHHHH
Confidence 7766665432110 011122346667777777655 67788877777444
No 284
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-31 Score=287.94 Aligned_cols=233 Identities=21% Similarity=0.325 Sum_probs=204.9
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
.+..+..+||-|.||.||.|.|++-.-.||||.++.+....+.++.|..+++.++ |||+|+|+++|..+..+||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeik------HpNLVqLLGVCT~EpPFYI 340 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTHEPPFYI 340 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhc------CccHHHHhhhhccCCCeEE
Confidence 4566788999999999999999999999999999999888899999999999986 7899999999999999999
Q ss_pred EEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
|+|||. |+|++++....+.. ++.-.+..++.||..||.||..+++|||||..+|+|+.. +..+|++|||++++
T Consensus 341 iTEfM~yGNLLdYLRecnr~e----v~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgE--nhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 341 ITEFMCYGNLLDYLRECNRSE----VPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHIVKVADFGLSRL 414 (1157)
T ss_pred EEecccCccHHHHHHHhchhh----cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccc--cceEEeeccchhhh
Confidence 999996 89999998765543 677788899999999999999999999999999999995 88899999999998
Q ss_pred ccccc-ccccc---cCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 573 QTDNL-CLYVQ---SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 573 ~~~~~-~~~~g---t~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
+.... +...| +.-|.|||.+..+.++.|+|||+|||+||||.| |..||++.+..+++..+ .++
T Consensus 415 MtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LL------------Ekg 482 (1157)
T KOG4278|consen 415 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLL------------EKG 482 (1157)
T ss_pred hcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHH------------hcc
Confidence 76543 33344 566999999999999999999999999999999 99999999877766554 445
Q ss_pred ccccccccCCchhhhhHHHHHHH
Q 005415 648 QEIYKYFTKEYDLYYINEVCFAN 670 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~ 670 (697)
.++...--|++..|.+|+.||+=
T Consensus 483 yRM~~PeGCPpkVYeLMraCW~W 505 (1157)
T KOG4278|consen 483 YRMDGPEGCPPKVYELMRACWNW 505 (1157)
T ss_pred ccccCCCCCCHHHHHHHHHHhcC
Confidence 55556667889999999999973
No 285
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.97 E-value=3.6e-30 Score=268.88 Aligned_cols=244 Identities=21% Similarity=0.261 Sum_probs=186.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCc----EEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~----~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
..+|++.++||.|+||+||+|.+..++. .||+|+++.. ......+.+|+.+++.+ .||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~ 79 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV------GSPYVCRLLGICL 79 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc------CCCCCceEEEEEc
Confidence 4689999999999999999999877765 4899998743 22334566677776655 4789999999987
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
. ...+++|||++ ++|.+++..... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+
T Consensus 80 ~-~~~~l~~~~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~--~~~~kL~ 151 (279)
T cd05109 80 T-STVQLVTQLMPYGCLLDYVRENKD-----RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS--PNHVKIT 151 (279)
T ss_pred C-CCcEEEEEcCCCCCHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC--CCcEEEC
Confidence 5 45778999997 577776653321 2889999999999999999999999999999999999984 7789999
Q ss_pred eCCCcccccccccc-----ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 566 DLGSSCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 566 DFGla~~~~~~~~~-----~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|||++......... ..+++.|+|||.+.+..++.++|||||||++|||++ |..||...........+.. ...+
T Consensus 152 dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~ 230 (279)
T cd05109 152 DFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GERL 230 (279)
T ss_pred CCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcC
Confidence 99998765432211 223567999999998889999999999999999998 9999987766555444332 2222
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
+.. -.....+..++..||... |..|.++.++.
T Consensus 231 ~~~-----------~~~~~~~~~li~~~l~~d----p~~Rp~~~~l~ 262 (279)
T cd05109 231 PQP-----------PICTIDVYMIMVKCWMID----SECRPRFRELV 262 (279)
T ss_pred CCC-----------ccCCHHHHHHHHHHcCCC----hhhCcCHHHHH
Confidence 211 112346677888888755 66777777766
No 286
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=3.7e-30 Score=264.17 Aligned_cols=249 Identities=24% Similarity=0.297 Sum_probs=194.6
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--cC
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--LE 489 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~--~~ 489 (697)
+|++.+.||.|+||.||++.+..+++.||+|++... .....++..|+.+++.++ ||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK------HPNIVRYYDRIIDRSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcC------CCccceeeeeeecCCCC
Confidence 589999999999999999999999999999998743 233456677888888774 7899999998864 45
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHH-----hcCccccCCCCccccccccCcceEE
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH-----SLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLH-----s~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
..+++|||++ ++|.+++..... ....+++..++.++.||+.||.||| +.+|+|+||+|+||+++. ++.+|
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~--~~~~k 150 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKK--ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA--NNNVK 150 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec--CCCEE
Confidence 6899999997 467777654322 1233889999999999999999999 889999999999999995 78999
Q ss_pred EeeCCCcccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 564 IIDLGSSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 564 L~DFGla~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
|+|||++....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+.....+..
T Consensus 151 l~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 230 (265)
T cd08217 151 LGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRI 230 (265)
T ss_pred EecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCC
Confidence 99999987654432 235678899999999988899999999999999999999999988876555555433211110
Q ss_pred HHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 641 LEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 641 ~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
. . .....+..++..||. ..|..|+++++++ +||
T Consensus 231 ~----------~--~~~~~~~~l~~~~l~----~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 231 P----------Y--RYSSELNEVIKSMLN----VDPDKRPSTEELLQLPLI 265 (265)
T ss_pred c----------c--ccCHHHHHHHHHHcc----CCcccCCCHHHHhhCCCC
Confidence 0 0 112355566666665 3488899999988 664
No 287
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=5.2e-30 Score=269.80 Aligned_cols=253 Identities=23% Similarity=0.260 Sum_probs=196.4
Q ss_pred CceEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEEecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~-----~~g~~VAVKii~~~~~-~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
++|.+.+.||+|+||.||+|.+. .++..+++|.+..... ....+.+|+.+++.++ |+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 78 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ------HEHIVKFYGVCGD 78 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCC------CCCcceEEEEEcc
Confidence 57999999999999999999853 3456789999875432 2345677888777764 7899999999999
Q ss_pred cCeEEEEEEccc-cchHHHHHhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc
Q 005415 488 LEHLFIVCELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (697)
Q Consensus 488 ~~~l~LVmEyl~-gsL~~~l~~~~~~----------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~ 556 (697)
....++||||+. ++|.+++...... .....+++..++.++.||+.||.|||+++|+||||||+|||++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 999999999996 5777776543210 11123788999999999999999999999999999999999995
Q ss_pred cCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHH
Q 005415 557 YQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 630 (697)
Q Consensus 557 ~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~ 630 (697)
++.++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+.+.
T Consensus 159 --~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 159 --NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred --CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 7899999999986543321 22345678999999999899999999999999999999 999998877766665
Q ss_pred HHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 631 ~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
.+........ .-.....+..++..||... |..|++++++..+|.
T Consensus 237 ~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~----P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 237 CITQGRVLER------------PRVCPKEVYDIMLGCWQRE----PQQRLNIKEIYKILH 280 (291)
T ss_pred HHhCCCCCCC------------CccCCHHHHHHHHHHcccC----hhhCcCHHHHHHHHH
Confidence 5433211110 0112346778888888755 888899998886664
No 288
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=4.1e-30 Score=265.16 Aligned_cols=238 Identities=23% Similarity=0.273 Sum_probs=184.0
Q ss_pred EeccCCCCceEEEEE--CCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 421 YLGSAAFSKVFQAQD--LHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d--~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
.||+|+||.||+|.+ ..++..+|+|+++... ...+.+..|+.+++.+. ||||+++++++. ....++||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~-~~~~~lv~ 74 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLD------NPYIVRMIGICE-AESWMLVM 74 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCC------CCCcceEEEEEc-CCCcEEEE
Confidence 589999999999964 4578899999987432 33456777888887764 789999999875 45678999
Q ss_pred Ecccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
||+++ .|.+++.... .+++..+..++.|++.||.|||++||+||||||.||+++. ++.+||+|||++....
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~--~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 75 ELAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT--QHYAKISDFGLSKALG 146 (257)
T ss_pred ecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcC--CCeEEECCCccccccC
Confidence 99985 5766664322 2889999999999999999999999999999999999985 7789999999987654
Q ss_pred cccc------cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 575 DNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 575 ~~~~------~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
.... ...++..|+|||.+....++.++|+|||||++|||++ |..||......+....+.+...++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~------ 220 (257)
T cd05116 147 ADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECP------ 220 (257)
T ss_pred CCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC------
Confidence 3221 1223568999999988889999999999999999998 99999988777766665432211110
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
-.....+..++..||... |..|++++.+..-|
T Consensus 221 ------~~~~~~l~~li~~~~~~~----p~~Rp~~~~i~~~l 252 (257)
T cd05116 221 ------QRCPPEMYDLMKLCWTYG----VDERPGFAVVELRL 252 (257)
T ss_pred ------CCCCHHHHHHHHHHhccC----chhCcCHHHHHHHH
Confidence 123456778888888766 66777777766433
No 289
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=6.7e-30 Score=263.58 Aligned_cols=249 Identities=27% Similarity=0.326 Sum_probs=192.5
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.+.||.|++|.||+|.+..+++.||+|.++.. ......+.+|+++++.++ |+||+++++++....
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~------~~~i~~~~~~~~~~~ 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD------HPNVIKYLASFIENN 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC------CCCeeeeeeeeecCC
Confidence 5799999999999999999999989999999988632 223456778888888774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..++||||+.+ +|..++..... ....+++..+..++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~--~~~~~l~d~~ 151 (267)
T cd08224 76 ELNIVLELADAGDLSRMIKHFKK--QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEecCCCCCHHHHHHHhcc--cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC--CCcEEEeccc
Confidence 99999999985 67766653322 1223788999999999999999999999999999999999985 7889999999
Q ss_pred Cccccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHhhCCCCHHH
Q 005415 569 SSCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA--VVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 569 la~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~--~~e~l~~I~~~lg~~p~e~ 643 (697)
.+...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.... ..+....+.....++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (267)
T cd08224 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPA- 230 (267)
T ss_pred eeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCCh-
Confidence 98654432 223467888999999998889999999999999999999999996543 223333332211111000
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
-.....+..++..||... |..|+++.++..
T Consensus 231 ----------~~~~~~~~~~i~~cl~~~----p~~Rp~~~~il~ 260 (267)
T cd08224 231 ----------DHYSEELRDLVSRCINPD----PEKRPDISYVLQ 260 (267)
T ss_pred ----------hhcCHHHHHHHHHHcCCC----cccCCCHHHHHH
Confidence 012335667777776544 788888887763
No 290
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=5.2e-30 Score=273.75 Aligned_cols=251 Identities=23% Similarity=0.326 Sum_probs=197.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
..|...+.||+|+||.||++.+..++..||+|.+.... .....+..|+.+++.++ |||++++++++....
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~ 98 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK------HPNSIEYKGCYLREH 98 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC------CCCEEEEEEEEeeCC
Confidence 45888899999999999999999999999999987432 22345667777777664 789999999999999
Q ss_pred eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 490 ~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
..++||||+.+++.+.+..... .+++..+..++.|++.||.|||+++|+||||+|+||+++. ++.++|+|||+
T Consensus 99 ~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~--~~~~kl~dfg~ 171 (317)
T cd06635 99 TAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGS 171 (317)
T ss_pred eEEEEEeCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC--CCCEEEecCCC
Confidence 9999999999988877654322 2788999999999999999999999999999999999985 78899999998
Q ss_pred ccccccccccccccCCCCCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 570 SCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 570 a~~~~~~~~~~~gt~~Y~APE~l~---~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
+...... ....+++.|+|||.+. ...++.++|+|||||++|+|++|..||........+..+.....++...
T Consensus 172 ~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---- 246 (317)
T cd06635 172 ASIASPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS---- 246 (317)
T ss_pred ccccCCc-ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCC----
Confidence 8654432 3356788999999984 3468889999999999999999999998877666666654432221110
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 647 GQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 647 ~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
......+..++..||... |..|.+++++. +|+....
T Consensus 247 -------~~~~~~l~~li~~~l~~~----p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 247 -------NEWSDYFRNFVDSCLQKI----PQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred -------ccccHHHHHHHHHHccCC----cccCcCHHHHHhChhhhccC
Confidence 012234667777777644 78888998888 7765443
No 291
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=2.2e-30 Score=273.11 Aligned_cols=261 Identities=20% Similarity=0.256 Sum_probs=195.2
Q ss_pred cCceEEEEEeccCCCCceEEEEECCC--------------CcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCC
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHT--------------GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEH 476 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~--------------g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hp 476 (697)
.++|++.+.||+|+||.||++.+..+ ...||+|.++.. ......+.+|+++++.++ |+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~------h~ 77 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK------NP 77 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC------CC
Confidence 36899999999999999999986543 235899998753 233456778988888775 78
Q ss_pred ceeEEEEEEEecCeEEEEEEcccc-chHHHHHhhhcc------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCC
Q 005415 477 HILRLYDYFYHLEHLFIVCELLRA-NLYEFQKFNQES------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (697)
Q Consensus 477 nIv~l~~~f~~~~~l~LVmEyl~g-sL~~~l~~~~~~------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP 549 (697)
||+++++++......++||||+.+ +|.+++...... .....+++..+..++.|++.||.|||+++++|+||||
T Consensus 78 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 157 (295)
T cd05097 78 NIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT 157 (295)
T ss_pred CcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence 999999999999999999999974 666666432210 0112267888999999999999999999999999999
Q ss_pred ccccccccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q 005415 550 ENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFPN 622 (697)
Q Consensus 550 ~NILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt--G~~PF~~ 622 (697)
+||+++. ++.+||+|||++....... ....++..|+|||++.+..++.++|+|||||++|+|++ |..||..
T Consensus 158 ~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 158 RNCLVGN--HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred hhEEEcC--CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999985 7789999999986543221 11234668999999998889999999999999999998 7789988
Q ss_pred CcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 623 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 623 ~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
.+..+.+..+.+.......... ..........+..++..||... |..|++++++..+|.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~~l~~~----p~~RPs~~~i~~~l~ 294 (295)
T cd05097 236 LSDEQVIENTGEFFRNQGRQIY-----LSQTPLCPSPVFKLMMRCWSRD----IKDRPTFNKIHHFLR 294 (295)
T ss_pred cChHHHHHHHHHhhhhcccccc-----CCCCCCCCHHHHHHHHHHcCCC----chhCcCHHHHHHHHh
Confidence 7777666655442211110000 0001112356778888888755 788888888876654
No 292
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=1.5e-30 Score=269.10 Aligned_cols=248 Identities=27% Similarity=0.364 Sum_probs=191.6
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|++.+.||+|++|.||++.+..+++.+|||.+... ......+.+|+.+++.++ |+||+++++++....
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~ 75 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN------HPNVIKYYASFIEDN 75 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc------CCchhhhhheeEeCC
Confidence 4688999999999999999999999999999987642 223456677888888774 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..+++|||+.+ +|.+++...... ...+++..+..++.||+.||.|||++|++|+||||+||+++. ++.++|+|||
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg 151 (267)
T cd08229 76 ELNIVLELADAGDLSRMIKHFKKQ--KRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEEecCCCCHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCCEEECcch
Confidence 99999999985 676666533221 223889999999999999999999999999999999999985 7889999999
Q ss_pred Ccccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHhhCCCCHHH
Q 005415 569 SSCFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV--VMILARIIGMLGPIDLEM 643 (697)
Q Consensus 569 la~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~--~e~l~~I~~~lg~~p~e~ 643 (697)
++....... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||.+... ......+... ..++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~ 230 (267)
T cd08229 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-DYPPLPS 230 (267)
T ss_pred hhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC-CCCCCCc
Confidence 886554322 234678899999999988899999999999999999999999976543 2333333221 1111100
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
. .....+..++..||... |..|+|++++.
T Consensus 231 --------~--~~~~~~~~li~~~l~~~----p~~Rpt~~~i~ 259 (267)
T cd08229 231 --------D--HYSEELRQLVNMCINPD----PEKRPDITYVY 259 (267)
T ss_pred --------c--cccHHHHHHHHHhcCCC----cccCCCHHHHH
Confidence 0 12335667777777654 88888888654
No 293
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=6.2e-30 Score=268.67 Aligned_cols=260 Identities=26% Similarity=0.317 Sum_probs=195.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--C
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--~ 489 (697)
++|.+.+.||.|++|.||++.+..+++.+|+|++.... .....+.+|+++++.++ ||||+++++++... .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~ 74 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCK------SPYIVKYYGAFLDESSS 74 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCC------CCCeeeeeeEEEccCCC
Confidence 46899999999999999999999999999999987542 34466778888887764 78999999998754 4
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+++||||+++ +|.+++..... ....+++..+..++.||+.||.|||+.+++|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~--~~~~~l~dfg 150 (287)
T cd06621 75 SIGIAMEYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR--KGQVKLCDFG 150 (287)
T ss_pred eEEEEEEecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec--CCeEEEeecc
Confidence 78999999974 66666543222 1223788899999999999999999999999999999999985 7789999999
Q ss_pred Cccccccc-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHHhhCCCCHH
Q 005415 569 SSCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA-----VVMILARIIGMLGPIDLE 642 (697)
Q Consensus 569 la~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~-----~~e~l~~I~~~lg~~p~e 642 (697)
++...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||.... ..+....+... ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~- 226 (287)
T cd06621 151 VSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM---PNP- 226 (287)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC---Cch-
Confidence 98654332 223456788999999998889999999999999999999999997652 22333222211 111
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.+........ .....+..++..||.. .|..|.|+++++ +|+....
T Consensus 227 ~~~~~~~~~~--~~~~~~~~li~~~l~~----~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 227 ELKDEPGNGI--KWSEEFKDFIKQCLEK----DPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred hhccCCCCCC--chHHHHHHHHHHHcCC----CcccCCCHHHHHhCccccccc
Confidence 1111100000 1123556666777654 488999999999 8986543
No 294
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.97 E-value=3.4e-30 Score=269.83 Aligned_cols=246 Identities=20% Similarity=0.241 Sum_probs=184.8
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCc----EEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~----~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
++|++.+.||.|+||+||+|.+..++. .+++|.+.... .....+..|+.++.. .+||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~------l~h~~iv~~~~~~~~ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGS------LDHAYIVRLLGICPG 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhc------CCCCCcceEEEEECC
Confidence 578999999999999999999877776 47777775332 222344445555543 358999999998754
Q ss_pred cCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
...++++||+. ++|.+++..... .+++..+..++.||+.||.|||+++++||||||+|||++. ++.+||+|
T Consensus 81 -~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~--~~~~kl~D 152 (279)
T cd05111 81 -ASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS--DSIVQIAD 152 (279)
T ss_pred -CccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEEcC
Confidence 55788999987 677777754322 2889999999999999999999999999999999999985 78899999
Q ss_pred CCCccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 567 LGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 567 FGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
||++...... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.........+ +....++
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~ 231 (279)
T cd05111 153 FGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-EKGERLA 231 (279)
T ss_pred CccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCC
Confidence 9998754322 122345678999999998889999999999999999998 99999887765543333 2222221
Q ss_pred HHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 641 LEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 641 ~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
.. -.....+..++..||... |..|.++++++.-|
T Consensus 232 ~~-----------~~~~~~~~~li~~c~~~~----p~~Rps~~el~~~l 265 (279)
T cd05111 232 QP-----------QICTIDVYMVMVKCWMID----ENVRPTFKELANEF 265 (279)
T ss_pred CC-----------CCCCHHHHHHHHHHcCCC----cccCcCHHHHHHHH
Confidence 10 012345677888888865 77788888877433
No 295
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=4.5e-30 Score=266.39 Aligned_cols=247 Identities=20% Similarity=0.232 Sum_probs=183.4
Q ss_pred EeccCCCCceEEEEECC--CCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 005415 421 YLGSAAFSKVFQAQDLH--TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~--~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmE 496 (697)
.||+|+||.||+|.... ....+|+|.+.... .....+.+|+.+++.+ +||||+++++.+......++|||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~nii~~~~~~~~~~~~~lv~e 75 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL------NHPNVLQCLGQCIESIPYLLVLE 75 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC------CCCCcceEEEEECCCCceEEEEE
Confidence 58999999999996432 44678888876432 2234566787777765 48899999999999999999999
Q ss_pred ccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccc
Q 005415 497 LLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 497 yl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~ 575 (697)
|+. ++|.+++...... .....++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGM-VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA--DLSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhcccc-ccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC--CCcEEEecccccccccc
Confidence 997 4677776543321 1122567788899999999999999999999999999999985 78899999999864322
Q ss_pred c-----cccccccCCCCCchhhcC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCC-CCH
Q 005415 576 N-----LCLYVQSRSYRAPEVIIG-------LPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGP-IDL 641 (697)
Q Consensus 576 ~-----~~~~~gt~~Y~APE~l~~-------~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~-~p~ 641 (697)
. .....++..|+|||++.. ..++.++|||||||++|+|++ |..||......+.+..++..... ++.
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (269)
T cd05042 153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK 232 (269)
T ss_pred chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC
Confidence 1 112334667999999743 356889999999999999999 89999988877777666543321 111
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
... . -.....+..++..||. .|..|++++++...|
T Consensus 233 ~~~------~--~~~~~~~~~~~~~~~~-----dp~~Rpt~~~v~~~l 267 (269)
T cd05042 233 PQL------D--LKYSDRWYEVMQFCWL-----DPETRPTAEEVHELL 267 (269)
T ss_pred Ccc------c--ccCCHHHHHHHHHHhc-----CcccccCHHHHHHHh
Confidence 110 0 1123456678888983 688999999887544
No 296
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=5.4e-30 Score=265.67 Aligned_cols=247 Identities=25% Similarity=0.296 Sum_probs=189.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~------~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
..|++.+.||+|+||.||+|.+..++..||+|.+.... .....+.+|+.+++.++ ||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~ 75 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ------HERIVQYYGCLRD 75 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC------CCCeeeEEEEEEc
Confidence 36899999999999999999999999999999986431 22345677888888774 7899999999875
Q ss_pred c--CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEE
Q 005415 488 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (697)
Q Consensus 488 ~--~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL 564 (697)
. ..++++|||+.+ +|.+.+.... .+++..++.++.|++.||.|||+++|+||||+|+||+++. ++.++|
T Consensus 76 ~~~~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~--~~~~~l 147 (266)
T cd06651 76 RAEKTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS--AGNVKL 147 (266)
T ss_pred CCCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEE
Confidence 3 678999999974 6766664322 2788889999999999999999999999999999999985 778999
Q ss_pred eeCCCccccccc------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCC
Q 005415 565 IDLGSSCFQTDN------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 565 ~DFGla~~~~~~------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
+|||++...... .....++..|+|||.+.+..++.++|+|||||++|+|++|+.||........+..+......
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~ 227 (266)
T cd06651 148 GDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTN 227 (266)
T ss_pred ccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCC
Confidence 999998654321 12245788899999999988999999999999999999999999876555444443221111
Q ss_pred CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 639 IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 639 ~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
+. ... .....+..++ .||.. .|..|.+++++. +|++
T Consensus 228 ~~---------~~~--~~~~~~~~li-~~~~~----~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 228 PQ---------LPS--HISEHARDFL-GCIFV----EARHRPSAEELLRHPFAQ 265 (266)
T ss_pred CC---------Cch--hcCHHHHHHH-HHhcC----ChhhCcCHHHHhcCcccc
Confidence 10 000 1122334444 46553 588999999998 8764
No 297
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=5e-30 Score=262.46 Aligned_cols=246 Identities=26% Similarity=0.346 Sum_probs=194.1
Q ss_pred eEEEEEeccCCCCceEEEEECCCC----cEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTG----VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g----~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
+++.+.||.|+||.||++.+...+ ..||+|+++.... ....+..|+.+++.++ |+||+++++++...+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~ 74 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD------HPNIVKLLGVCTEEE 74 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC------CCchheEEEEEcCCC
Confidence 357789999999999999988766 8999999976543 4567788888888773 789999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..+++|||+.+ +|.+++....... +++..+..++.|++.||.+||+.+++|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~~i~e~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~--~~~~~l~dfg 148 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYLRKNRPKE----LSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE--NLVVKISDFG 148 (258)
T ss_pred eeEEEEeccCCCCHHHHHHhhhhcc----CCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc--CCeEEEcccC
Confidence 99999999974 6777765433211 788999999999999999999999999999999999995 7789999999
Q ss_pred Cccccccccc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHH
Q 005415 569 SSCFQTDNLC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEM 643 (697)
Q Consensus 569 la~~~~~~~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~ 643 (697)
++........ ...+++.|+|||.+.+..++.++||||||+++++|++ |.+||...+..+.+..+......+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~- 227 (258)
T smart00219 149 LSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPE- 227 (258)
T ss_pred CceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCC-
Confidence 9866543311 1225678999999988889999999999999999998 899998887777777664432211110
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
.....+..++..||... |..|+|++++..+|
T Consensus 228 -----------~~~~~~~~~i~~~l~~~----p~~Rpt~~~ll~~l 258 (258)
T smart00219 228 -----------NCPPEIYKLMLQCWAED----PEDRPTFSELVEIL 258 (258)
T ss_pred -----------cCCHHHHHHHHHHCcCC----hhhCcCHHHHHhhC
Confidence 12335556666665544 88899999887554
No 298
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=1.4e-30 Score=268.32 Aligned_cols=244 Identities=24% Similarity=0.304 Sum_probs=191.0
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+|++.+.||.|+||.||+|.+..+++.||+|++.... .....+.+|+++++.++ ||||+++++++.....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~ 74 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN------HPFLVNLWYSFQDEEN 74 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC------CCChHHHHHhhcCCCe
Confidence 4899999999999999999999999999999997532 33456777888877764 8899999999999999
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.++||||+.+ +|...+... ..+++..+..++.||+.||.|||+++++|+||+|+||+++. ++.++|+|||.
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~l~d~~~ 146 (258)
T cd05578 75 MYLVVDLLLGGDLRYHLSQK------VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE--QGHVHITDFNI 146 (258)
T ss_pred EEEEEeCCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC--CCCEEEeeccc
Confidence 9999999975 566555433 12888999999999999999999999999999999999985 78899999999
Q ss_pred ccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHHHHhhCCCCHHHH
Q 005415 570 SCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV---VMILARIIGMLGPIDLEML 644 (697)
Q Consensus 570 a~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~---~e~l~~I~~~lg~~p~e~~ 644 (697)
+...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+. ......+.......|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 223 (258)
T cd05578 147 ATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPA--- 223 (258)
T ss_pred ccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcc---
Confidence 8765433 2335678889999999988899999999999999999999999987663 2222222111111111
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCH--HHHH--Hhh
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTL--EYAA--LWL 689 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~--e~~~--~wl 689 (697)
.....+..++..||... |..|.+. ++++ +|+
T Consensus 224 ----------~~~~~~~~~i~~~l~~~----p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 224 ----------TWSTEAIDAINKLLERD----PQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ----------cCcHHHHHHHHHHccCC----hhHcCCccHHHHhcCCCC
Confidence 11246667777777655 6666766 6666 664
No 299
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=3.6e-30 Score=268.86 Aligned_cols=252 Identities=23% Similarity=0.248 Sum_probs=190.5
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 422 LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
||+|+||+||+|.+..+++.||+|++.... .....+..|+++++.++ ||||+++++.+...+..++||||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS------SRFIVSLAYAFETKDDLCLVMTL 74 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC------CCCEeeeeeEEecCCeEEEEEec
Confidence 699999999999999999999999987432 22334567888888774 78999999999999999999999
Q ss_pred ccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+++ +|.+++..... ..+++..+..++.|++.||.|||++|++|+||+|+||+++. ++.++|+|||.+......
T Consensus 75 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~--~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 75 MNGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD--HGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEccCcchhhhccC
Confidence 984 66666653332 23889999999999999999999999999999999999985 788999999988654322
Q ss_pred --cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccccccc
Q 005415 577 --LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYF 654 (697)
Q Consensus 577 --~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~ 654 (697)
.....++..|+|||.+.+..++.++|||||||++|+|++|+.||...........+.......+. ....
T Consensus 149 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~-- 219 (277)
T cd05577 149 KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAV-------EYPD-- 219 (277)
T ss_pred CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccc-------cCCc--
Confidence 22345678899999998888999999999999999999999999765432222222111110000 0011
Q ss_pred cCCchhhhhHHHHHHHHHHHhhhhcc-CHHHHH--HhhcccCC
Q 005415 655 TKEYDLYYINEVCFANIFISLVVIRL-TLEYAA--LWLFGIDQ 694 (697)
Q Consensus 655 ~~~~~l~~i~~~cw~~l~~~~~~~r~-t~e~~~--~wl~~~~~ 694 (697)
.....+..++..||......++..+. +.++++ +|+...++
T Consensus 220 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~ 262 (277)
T cd05577 220 KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW 262 (277)
T ss_pred cCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence 12456777888888766555555555 888888 99975544
No 300
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.6e-30 Score=272.38 Aligned_cols=251 Identities=24% Similarity=0.300 Sum_probs=191.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
.+|++++.||+|+||+||++.+..+++.||+|++... ......+.+|+++++.++ ||||+++++++......
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~ 78 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR------SPYIVSFYGAFLNENNI 78 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcC------CCCcceEeeeEecCCEE
Confidence 5789999999999999999999999999999988753 334467778888888764 78999999999999999
Q ss_pred EEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEeeCCC
Q 005415 492 FIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 492 ~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
++||||++++ |..++.... .+++..++.++.|++.||.|||+ .+++|+||+|+||+++. ++.++|+|||+
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~d~gl 150 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS--RGQIKLCDFGV 150 (284)
T ss_pred EEEEecCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC--CCcEEEccCCc
Confidence 9999999864 544443221 27899999999999999999997 58999999999999985 78899999998
Q ss_pred ccccccc-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHH--------HHHHHHHHhhCCCC
Q 005415 570 SCFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVV--------MILARIIGMLGPID 640 (697)
Q Consensus 570 a~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~--------e~l~~I~~~lg~~p 640 (697)
+...... .....++..|+|||++.+..++.++|||||||++|+|++|..||...... .+...+.......+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd06620 151 SGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP 230 (284)
T ss_pred ccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC
Confidence 8654322 23356889999999998888999999999999999999999999865442 11111111111100
Q ss_pred HHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 641 LEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 641 ~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
... . .......+..++..||. ..|..|.+++++. +|+.
T Consensus 231 ~~~-------~-~~~~~~~~~~li~~~l~----~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 231 PRL-------P-SSDFPEDLRDFVDACLL----KDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred CCC-------C-chhcCHHHHHHHHHHhc----CCcccCcCHHHHhcCcccc
Confidence 000 0 00112345556666654 4589999999988 5553
No 301
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=3.3e-30 Score=269.69 Aligned_cols=257 Identities=23% Similarity=0.253 Sum_probs=188.0
Q ss_pred Cce-EEEEEeccCCCCceEEEE----ECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 414 GRY-YVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 414 ~rY-~i~e~LG~G~fG~Vy~a~----d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
+|| ++++.||+|+||+||++. ...++..||+|+++... .....+.+|+.+++.++ ||||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~ 76 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLY------HENIVKYKGCCS 76 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCC------CCCEeeEEEEEe
Confidence 566 999999999999998864 34578899999997542 23456678888888774 789999999887
Q ss_pred ec--CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 487 HL--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 487 ~~--~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
.. ...++||||+.+ +|.+++... .+++..+..++.|++.||.|||+++|+||||||+|||++. ++.++
T Consensus 77 ~~~~~~~~lv~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~ 147 (283)
T cd05080 77 EQGGKGLQLIMEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN--DRLVK 147 (283)
T ss_pred cCCCceEEEEecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC--CCcEE
Confidence 54 468999999985 555555421 1889999999999999999999999999999999999985 78899
Q ss_pred EeeCCCccccccccc------cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH-Hhh
Q 005415 564 IIDLGSSCFQTDNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII-GML 636 (697)
Q Consensus 564 L~DFGla~~~~~~~~------~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~-~~l 636 (697)
|+|||++........ ...++..|+|||.+.+..++.++||||||+++|+|++|..||...... +..+. ...
T Consensus 148 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~ 225 (283)
T cd05080 148 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQ 225 (283)
T ss_pred EeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccc
Confidence 999999876543211 123456699999998888999999999999999999999999654321 11111 111
Q ss_pred CCCCH----HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 637 GPIDL----EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 637 g~~p~----e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
+.... +.................+..++..||... |..|++++++...|..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 226 GQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETE----AKFRPTFRSLIPILKE 280 (283)
T ss_pred cccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccC----hhhCCCHHHHHHHHHH
Confidence 11111 111111111111123356778888888865 8889999988866543
No 302
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=7.3e-30 Score=262.97 Aligned_cols=254 Identities=25% Similarity=0.343 Sum_probs=194.8
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|++.+.||.|+||+||+|.+..++..+|+|++.... .....+.+|+.+++.++ |+||+++++.+......
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCN------HPNVVKYYTSFVVGDEL 74 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcC------CCCEEEEEEEEeeCCEE
Confidence 46999999999999999999998899999999987432 24466778888887764 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++|||++.+ +|.+++..... ...+++..+..++.|++.||.|||++||+|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~--~~~~~l~df~~~ 149 (267)
T cd06610 75 WLVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE--DGSVKIADFGVS 149 (267)
T ss_pred EEEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEEcccchH
Confidence 999999975 56666543221 123789999999999999999999999999999999999995 778999999988
Q ss_pred ccccccc-------ccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 571 CFQTDNL-------CLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 571 ~~~~~~~-------~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
....... ....++..|+|||++... .++.++|+|||||++|+|++|+.||...+....+.++... .+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~ 226 (267)
T cd06610 150 ASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPPS 226 (267)
T ss_pred HHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCCC
Confidence 6544321 234678899999999876 7899999999999999999999999877766655554432 1110
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
. .. ...+-.-...+..++..||.. .|..|.+++++. +|+
T Consensus 227 ~-~~---~~~~~~~~~~~~~li~~~l~~----~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 227 L-ET---GADYKKYSKSFRKMISLCLQK----DPSKRPTAEELLKHKFF 267 (267)
T ss_pred c-CC---ccccccccHHHHHHHHHHcCC----ChhhCcCHHHHhhCCCC
Confidence 0 00 000001123445566666554 488899999988 764
No 303
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=9.9e-30 Score=258.00 Aligned_cols=247 Identities=31% Similarity=0.462 Sum_probs=197.1
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~-~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
.|.+.+.||+|++|.||++.+..+++.+++|++..... ....+.+|+.+++.++ |++|+++++.+......++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~l 74 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK------HPNIVKYYGSYLKKDELWI 74 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC------CCCEeEEEEEEecCCeEEE
Confidence 48889999999999999999988999999999986543 4567788888888775 7899999999999999999
Q ss_pred EEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
++||++ ++|.+++.... ..+++..+..++.|++.||.+||++|++|+||+|+||+++. ++.++|+|||.+..
T Consensus 75 ~~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~~~~~~ 147 (253)
T cd05122 75 VMEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS--DGEVKLIDFGLSAQ 147 (253)
T ss_pred EEecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc--CCeEEEeecccccc
Confidence 999998 56666655432 23899999999999999999999999999999999999995 78899999999876
Q ss_pred ccccc--ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 573 QTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 573 ~~~~~--~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
..... ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...+....+..+... ..+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~--------- 217 (253)
T cd05122 148 LSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN-GPPGL--------- 217 (253)
T ss_pred ccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc-CCCCc---------
Confidence 65443 4567788999999999888899999999999999999999999877655544443321 11110
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hh
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LW 688 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~w 688 (697)
.........+..++..||... |..|.|+++++ +|
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~----p~~R~t~~~~l~~~~ 253 (253)
T cd05122 218 RNPEKWSDEFKDFLKKCLQKN----PEKRPTAEQLLKHPF 253 (253)
T ss_pred CcccccCHHHHHHHHHHccCC----hhhCCCHHHHhcCCC
Confidence 000011345666777776654 78899999887 55
No 304
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=2.6e-30 Score=265.26 Aligned_cols=244 Identities=30% Similarity=0.379 Sum_probs=194.3
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 422 LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
||.|+||.||++.+..+++.+++|++.... .....+.+|+.+++.++ ||||+++++.+......++||||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~lv~e~ 74 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ------SPYVVKLYYSFQGKKNLYLVMEY 74 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC------CcchhHHHHheecCcEEEEEEec
Confidence 689999999999998899999999987543 23456667777777664 78999999999999999999999
Q ss_pred ccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+.+ +|.+++.... .+++..+..++.||+.||.|||+++++|+||+|+||+++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~--~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 75 LPGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS--NGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC--CCCEEEEecccchhcccC
Confidence 975 6777665332 2889999999999999999999999999999999999995 788999999987653322
Q ss_pred -----------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 577 -----------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 577 -----------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
.....++..|+|||.+....++.++|+||||+++|+|++|..||......+....+.....+++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 222 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPE---- 222 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCc----
Confidence 12345678899999998888899999999999999999999999988877777666442211111
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCH---HHHH--HhhcccCC
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTL---EYAA--LWLFGIDQ 694 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~---e~~~--~wl~~~~~ 694 (697)
...-...+..++..||.. .+..|+|+ ++++ +|++.++|
T Consensus 223 -------~~~~~~~~~~~i~~~l~~----~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 223 -------DVEVSDEAIDLISKLLVP----DPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred -------cccCCHHHHHHHHHHhcC----CHhhcCCCccHHHHhcCccccCCCC
Confidence 011244666777777764 47788888 7777 99987765
No 305
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=7.6e-30 Score=266.40 Aligned_cols=248 Identities=21% Similarity=0.266 Sum_probs=193.3
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCc----EEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~----~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
..+|++.+.||+|+||.||+|.++.++. .||+|.+.... .....+.+|+.+++.++ ||||+++++++.
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~ 79 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVD------HPHVVRLLGICL 79 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEe
Confidence 4689999999999999999999876654 58999887543 23456677888887764 789999999998
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
. ...++||||+. ++|.+++..... .+++..+..++.||+.||.|||+++|+|+||||+||+++. ++.+||+
T Consensus 80 ~-~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~--~~~~kL~ 151 (279)
T cd05057 80 S-SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT--PQHVKIT 151 (279)
T ss_pred c-CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC--CCeEEEC
Confidence 7 78999999997 567776653322 2889999999999999999999999999999999999985 7789999
Q ss_pred eCCCcccccccccc-----ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 566 DLGSSCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 566 DFGla~~~~~~~~~-----~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|||.+......... ..++..|+|||.+....++.++|+|||||++||+++ |..||.+....+....+... ..+
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~ 230 (279)
T cd05057 152 DFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-ERL 230 (279)
T ss_pred CCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-CCC
Confidence 99998765432211 112457999999988889999999999999999999 99999988777766555432 111
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
+. .......+..++..||... +..|+++.++...+.
T Consensus 231 ~~-----------~~~~~~~~~~~~~~~l~~~----p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 231 PQ-----------PPICTIDVYMVLVKCWMID----AESRPTFKELINEFS 266 (279)
T ss_pred CC-----------CCCCCHHHHHHHHHHcCCC----hhhCCCHHHHHHHHH
Confidence 11 1123346778888888865 677888887774444
No 306
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=6.2e-30 Score=266.05 Aligned_cols=246 Identities=20% Similarity=0.260 Sum_probs=188.9
Q ss_pred EEeccCCCCceEEEEECCCCc--EEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGV--DVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~--~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+.||+|+||.||+|.+..++. .+++|.++.. ......+..|+.+++.+. +||||+++++++......++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc-----cCCCeeeEEEEEecCCCceEEE
Confidence 358999999999999887775 4688887742 334456778999888875 3889999999999999999999
Q ss_pred Eccc-cchHHHHHhhhcc----------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEE
Q 005415 496 ELLR-ANLYEFQKFNQES----------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (697)
Q Consensus 496 Eyl~-gsL~~~l~~~~~~----------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL 564 (697)
||+. ++|.+++...... .....+++..+..++.|++.||+|||++|++||||||+||+++. ++.+||
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~--~~~~kl 153 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKI 153 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcC--CCeEEE
Confidence 9997 5777777543311 11123788999999999999999999999999999999999985 788999
Q ss_pred eeCCCcccccccccc--ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 565 IDLGSSCFQTDNLCL--YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 565 ~DFGla~~~~~~~~~--~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
+|||++......... ...+..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.+..+......
T Consensus 154 ~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~--- 230 (270)
T cd05047 154 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRL--- 230 (270)
T ss_pred CCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCC---
Confidence 999998533222111 223567999999988889999999999999999997 99999887776666555322110
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHh
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALW 688 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~w 688 (697)
.........+..++..||... |..|.++++++.-
T Consensus 231 ---------~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~il~~ 264 (270)
T cd05047 231 ---------EKPLNCDDEVYDLMRQCWREK----PYERPSFAQILVS 264 (270)
T ss_pred ---------CCCCcCCHHHHHHHHHHcccC----hhhCCCHHHHHHH
Confidence 011123346778888888654 7778888888733
No 307
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=8.7e-30 Score=261.25 Aligned_cols=248 Identities=23% Similarity=0.307 Sum_probs=195.4
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++.+.||+|+||.||++.+..++..||+|.+... ....+.+.+|+.+++.++ |+||+++++.+......
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~------h~~i~~~~~~~~~~~~~ 74 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK------HPNIVTFFASFQENGRL 74 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCC------CCChhhhhheeccCCeE
Confidence 589999999999999999999999999999998753 223456678888888774 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++|+||+.+ +|.+++..... ..+++..+..++.|++.||.|||+.+|+|+||+|+||+++. +...++|+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~-~~~~~~l~d~~~~ 149 (257)
T cd08225 75 FIVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK-NGMVAKLGDFGIA 149 (257)
T ss_pred EEEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC-CCCeEEecccccc
Confidence 999999974 67666653322 12788999999999999999999999999999999999985 2346799999988
Q ss_pred ccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
....... ....+++.|+|||++.+..++.++|+||||+++|+|++|..||...+..+....+.....++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------- 222 (257)
T cd08225 150 RQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPI------- 222 (257)
T ss_pred hhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCC-------
Confidence 7654332 224578889999999888899999999999999999999999987776655554432111100
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
. ......+..++..||.. .|..|.++++++ +|+
T Consensus 223 ---~--~~~~~~~~~~i~~~l~~----~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 223 ---S--PNFSRDLRSLISQLFKV----SPRDRPSITSILKRPFL 257 (257)
T ss_pred ---C--CCCCHHHHHHHHHHhcc----ChhhCcCHHHHhhCCCC
Confidence 0 01123566677777654 589999999998 664
No 308
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=5.4e-30 Score=271.99 Aligned_cols=253 Identities=21% Similarity=0.306 Sum_probs=194.1
Q ss_pred eecCceEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~-----~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~ 483 (697)
...++|.+.+.||+|+||.||++.+. .++..||+|+++.. ......+.+|+.+++.+. +||||+++++
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~ 106 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG-----NHENIVNLLG 106 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc-----CCCCcceEEE
Confidence 44568999999999999999999752 34568999998753 233456778999998873 3789999999
Q ss_pred EEEecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 484 YFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 484 ~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
++......++||||+. ++|.+++..... ..+++..+..++.|++.||.|||+++|+|+||||+|||++. ++.+
T Consensus 107 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~ 180 (302)
T cd05055 107 ACTIGGPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTH--GKIV 180 (302)
T ss_pred EEecCCceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcC--CCeE
Confidence 9999999999999997 567777653221 22789999999999999999999999999999999999984 7789
Q ss_pred EEeeCCCccccccccc-----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhh
Q 005415 563 KIIDLGSSCFQTDNLC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 563 KL~DFGla~~~~~~~~-----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~l 636 (697)
+|+|||++........ ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+.+.+++...
T Consensus 181 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~ 260 (302)
T cd05055 181 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG 260 (302)
T ss_pred EECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC
Confidence 9999999875433211 1234677999999999889999999999999999998 999998876655444443321
Q ss_pred CCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 637 g~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
.+++. .......+..++..||.. .|..|+++.+++.-|
T Consensus 261 ~~~~~-----------~~~~~~~~~~li~~cl~~----~p~~Rpt~~ell~~l 298 (302)
T cd05055 261 YRMAQ-----------PEHAPAEIYDIMKTCWDA----DPLKRPTFKQIVQLI 298 (302)
T ss_pred CcCCC-----------CCCCCHHHHHHHHHHcCC----CchhCcCHHHHHHHH
Confidence 11110 011234566777777753 488899998887443
No 309
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=6.1e-30 Score=269.91 Aligned_cols=259 Identities=21% Similarity=0.253 Sum_probs=193.0
Q ss_pred cCceEEEEEeccCCCCceEEEEECC----------------CCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCC
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLH----------------TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPAD 474 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~----------------~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~ 474 (697)
.++|++.++||+|+||.||++.+.. ++..||+|+++.. ......+.+|+.+++.++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~------ 77 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK------ 77 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC------
Confidence 4689999999999999999986432 3457999999753 233457788999888875
Q ss_pred CCceeEEEEEEEecCeEEEEEEccc-cchHHHHHhhhccC-----CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCC
Q 005415 475 EHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESG-----GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (697)
Q Consensus 475 hpnIv~l~~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~-----~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLK 548 (697)
|+||+++++++......++||||+. ++|.+++....... ....+++..+..++.||+.||.|||++||+|+|||
T Consensus 78 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk 157 (296)
T cd05095 78 DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA 157 (296)
T ss_pred CCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 7899999999999999999999997 57777765432111 11237788899999999999999999999999999
Q ss_pred CccccccccCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q 005415 549 PENILIKSYQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFP 621 (697)
Q Consensus 549 P~NILl~~~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt--G~~PF~ 621 (697)
|+|||++. ++.++|+|||++....... .....+..|+|||...+..++.++|||||||++|||++ |..||.
T Consensus 158 p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 158 TRNCLVGK--NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred hheEEEcC--CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 99999985 7889999999986543221 11233567999999988889999999999999999998 889998
Q ss_pred CCcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHh
Q 005415 622 NDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALW 688 (697)
Q Consensus 622 ~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~w 688 (697)
..+..+.+............ .......-.....+..++..||... |..|++++++..-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rp~~~~i~~~ 293 (296)
T cd05095 236 QLSDEQVIENTGEFFRDQGR-----QVYLPKPALCPDSLYKLMLSCWRRN----AKERPSFQEIHAT 293 (296)
T ss_pred ccChHHHHHHHHHHHhhccc-----cccCCCCCCCCHHHHHHHHHHcCCC----cccCCCHHHHHHH
Confidence 77766655443221100000 0000111123356778888888654 7888888887643
No 310
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=8.2e-30 Score=263.72 Aligned_cols=240 Identities=20% Similarity=0.263 Sum_probs=185.4
Q ss_pred EeccCCCCceEEEEEC--CCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 005415 421 YLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~--~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmE 496 (697)
.||+|+||.||+|.+. ..+..||+|++.... .....+.+|+.+++.++ ||||+++++++. ....++|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~------h~~ii~~~~~~~-~~~~~lv~e 74 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLD------NPYIVRMIGVCE-AEALMLVME 74 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcC------CCCeEEEEEEEc-CCCeEEEEE
Confidence 3899999999999764 445679999987543 23456778889888874 789999999875 457899999
Q ss_pred cccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccc
Q 005415 497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 497 yl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~ 575 (697)
|+++ +|.+++..... .+++..+..++.||+.||.|||++|++||||||+|||++. ++.+||+|||++.....
T Consensus 75 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 75 MASGGPLNKFLSGKKD-----EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN--QHYAKISDFGLSKALGA 147 (257)
T ss_pred eCCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC--CCcEEeccCCccccccC
Confidence 9974 56666543221 2889999999999999999999999999999999999985 78899999999875433
Q ss_pred ccc------cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 576 NLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 576 ~~~------~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+....+.+... ++.
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~------- 219 (257)
T cd05115 148 DDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR-LDC------- 219 (257)
T ss_pred CccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC-CCC-------
Confidence 211 1122467999999998889999999999999999996 9999998877776655543221 110
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
.-.....+..++..||... +..|++++++...|.
T Consensus 220 ----~~~~~~~l~~li~~c~~~~----~~~Rp~~~~i~~~l~ 253 (257)
T cd05115 220 ----PAECPPEMYALMKDCWIYK----WEDRPNFAKVEERMR 253 (257)
T ss_pred ----CCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHHHh
Confidence 0123457788899999865 677888888875554
No 311
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=7.9e-30 Score=260.25 Aligned_cols=249 Identities=27% Similarity=0.363 Sum_probs=199.7
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++.+.||.|++|.||++.+..++..|++|++.... .....+.+|+++++.++ |||++++++.+......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~~~~~~~~~~~~~~~ 74 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN------HPNIIKYYESFEEKGKL 74 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC------CCChhheEEEEecCCEE
Confidence 5899999999999999999999899999999987542 34456778888888775 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++|+|++++ +|.+.+..... ....+++..+..++.|++.||.+||++|++|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~--~~~~~l~d~~~~ 150 (258)
T cd08215 75 CIVMEYADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS--NGLVKLGDFGIS 150 (258)
T ss_pred EEEEEecCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcC--CCcEEECCccce
Confidence 999999985 67776665431 1133899999999999999999999999999999999999995 788999999998
Q ss_pred ccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
....... ....+++.|+|||.+.+..++.++|+||||+++++|++|..||...+..+....+.....++.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----- 225 (258)
T cd08215 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPS----- 225 (258)
T ss_pred eecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCC-----
Confidence 6654432 23467888999999998889999999999999999999999998887766666654332111100
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.....+..++..||.. .|..|.++++++ +|+
T Consensus 226 -------~~~~~~~~~i~~~l~~----~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 226 -------QYSSELRNLVSSLLQK----DPEERPSIAQILQSPFI 258 (258)
T ss_pred -------CCCHHHHHHHHHHcCC----ChhhCcCHHHHhcCCCC
Confidence 2234555566666554 488999999988 775
No 312
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=4.8e-30 Score=265.15 Aligned_cols=247 Identities=23% Similarity=0.316 Sum_probs=187.9
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-------~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
+|++.+.||+|++|.||++.+..+++.||+|++.... .....+..|+++++.++ |+||+++++++..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~ 74 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN------HPHIIRMLGATCE 74 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC------CCceehhhceecc
Confidence 4788899999999999999999999999999987432 13456778888888774 7899999999999
Q ss_pred cCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
....++||||+.+ +|.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||+++. ....++|+|
T Consensus 75 ~~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~-~~~~~~l~d 147 (268)
T cd06630 75 DSHFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS-TGQRLRIAD 147 (268)
T ss_pred CCeEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEEcc
Confidence 9999999999985 5666654322 2788999999999999999999999999999999999975 234699999
Q ss_pred CCCcccccccc-------ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH---hh
Q 005415 567 LGSSCFQTDNL-------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG---ML 636 (697)
Q Consensus 567 FGla~~~~~~~-------~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~---~l 636 (697)
||.+....... ....++..|+|||.+.+..++.++|+||||+++++|++|..||...........+.. ..
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 227 (268)
T cd06630 148 FGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT 227 (268)
T ss_pred cccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccC
Confidence 99986654321 124567889999999988899999999999999999999999976543322222221 11
Q ss_pred CCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 637 g~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
..++. .. .-...+..++. +.+...|..|.++.+++ +|+
T Consensus 228 ~~~~~---------~~--~~~~~~~~~i~----~~l~~~p~~R~~~~~ll~~~~~ 267 (268)
T cd06630 228 TAPSI---------PE--HLSPGLRDVTL----RCLELQPEDRPPSRELLKHPVF 267 (268)
T ss_pred CCCCC---------ch--hhCHHHHHHHH----HHcCCCcccCcCHHHHhcCccc
Confidence 11110 00 01123334444 44445588899999888 775
No 313
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=6.7e-31 Score=289.48 Aligned_cols=249 Identities=27% Similarity=0.436 Sum_probs=204.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.+.|.+.+.||+|.|+.|.+|.+..++..||||++.++. .......+|+++++.|+ |||||+++.+.....
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~------HPnIvkl~~v~~t~~ 128 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN------HPNIVKLFSVIETEA 128 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC------Ccceeeeeeeeeecc
Confidence 367999999999999999999999999999999998643 33445778999998885 899999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+|+||||+. +.+.+++..+.. +.+..++.++.|++.|++|||+++|||||||++|||++. +..+||+|||
T Consensus 129 ~lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~--~mnikIaDfg 200 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDE--NMNIKIADFG 200 (596)
T ss_pred eeEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccc--ccceeeeccc
Confidence 9999999986 567777765544 666889999999999999999999999999999999995 7779999999
Q ss_pred Cccccccc--cccccccCCCCCchhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 569 SSCFQTDN--LCLYVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 569 la~~~~~~--~~~~~gt~~Y~APE~l~~~~~-s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
++...... ..+++|++.|.|||++.+..| ++.+|+||+|++||-|+.|.+||.+.+..+.-.+.+...-.+|..+..
T Consensus 201 fS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~ 280 (596)
T KOG0586|consen 201 FSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSC 280 (596)
T ss_pred cceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeec
Confidence 99776543 456899999999999999876 568999999999999999999999988777777766666666665555
Q ss_pred hcccccc-cc----cCCchhhhhHHHHHHHHHHHh
Q 005415 646 QGQEIYK-YF----TKEYDLYYINEVCFANIFISL 675 (697)
Q Consensus 646 ~~~~~~~-~~----~~~~~l~~i~~~cw~~l~~~~ 675 (697)
.++...+ ++ .+.+.+..+|..+|.+..-..
T Consensus 281 dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 281 DCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred hhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 5443222 21 223456677777777665444
No 314
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=2.9e-30 Score=273.36 Aligned_cols=250 Identities=22% Similarity=0.316 Sum_probs=191.7
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
|.....||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.+++.+ +||||+++++++......++|
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~~~~~~iv 96 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY------QHQNVVEMYKSYLVGEELWVL 96 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC------CCCchhhhhhheeeCCeEEEE
Confidence 334557999999999999999899999999986432 2334566777777765 488999999999999999999
Q ss_pred EEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 495 CELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 495 mEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
|||+.++.+..+.... .+++..++.++.|++.||.|||+++|+|+||+|+||+++. ++.++|+|||++....
T Consensus 97 ~e~~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~--~~~~kL~dfg~~~~~~ 168 (297)
T cd06659 97 MEFLQGGALTDIVSQT------RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQIS 168 (297)
T ss_pred EecCCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc--CCcEEEeechhHhhcc
Confidence 9999865443332221 2788999999999999999999999999999999999985 7899999999886543
Q ss_pred cc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 575 DN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 575 ~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
.. .....++..|+|||++.+..++.++|||||||++|+|++|..||......+.+..+.... +. ...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~-~~~------ 238 (297)
T cd06659 169 KDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---PP-KLK------ 238 (297)
T ss_pred cccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC---CC-Ccc------
Confidence 22 223567899999999998889999999999999999999999998877766665543211 10 000
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
........+..++..||. ..|..|.+++++. +|+....
T Consensus 239 ~~~~~~~~l~~~i~~~l~----~~P~~Rps~~~ll~~~~~~~~~ 278 (297)
T cd06659 239 NAHKISPVLRDFLERMLT----REPQERATAQELLDHPFLLQTG 278 (297)
T ss_pred ccCCCCHHHHHHHHHHhc----CCcccCcCHHHHhhChhhccCC
Confidence 001112345556666654 4588899999988 8887553
No 315
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=3.1e-30 Score=272.50 Aligned_cols=249 Identities=24% Similarity=0.351 Sum_probs=193.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
..|.....||.|+||.||++.+..++..||||.+.... .....+.+|+.+++.++ |+||+++++.+...+..+
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~------h~~ii~~~~~~~~~~~~~ 95 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH------HENVVDMYNSYLVGDELW 95 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCC------CCcHHHHHHheecCCeEE
Confidence 34555678999999999999998899999999986533 33445677888777664 889999999999999999
Q ss_pred EEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||+.++ |.+++. .. .+++..+..++.||+.||.|||+++|+||||||+||+++. ++.++|+|||++.
T Consensus 96 lv~e~~~~~~L~~~~~-~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kL~dfg~~~ 166 (292)
T cd06658 96 VVMEFLEGGALTDIVT-HT------RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS--DGRIKLSDFGFCA 166 (292)
T ss_pred EEEeCCCCCcHHHHHh-cC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEccCcchh
Confidence 999999865 444432 21 2788999999999999999999999999999999999985 7889999999886
Q ss_pred ccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
..... .....++..|+|||.+.+..++.++|+||||+++|||++|..||...+....+..+.....+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 241 (292)
T cd06658 167 QVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDS----- 241 (292)
T ss_pred hcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccc-----
Confidence 54322 2235678899999999988899999999999999999999999988777666655543332211100
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
......+..++..|| ...|..|.|+++++ +|+..
T Consensus 242 -----~~~~~~~~~li~~~l----~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 242 -----HKVSSVLRGFLDLML----VREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred -----cccCHHHHHHHHHHc----cCChhHCcCHHHHhhChhhhc
Confidence 011223444444444 45689999999999 88873
No 316
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=6.9e-30 Score=266.18 Aligned_cols=245 Identities=24% Similarity=0.304 Sum_probs=183.0
Q ss_pred CceEEEEEe--ccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYL--GSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~L--G~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
++|.+.+.+ |+|+||.||++.++.++..+|+|++...... ..|+.+...+. +||||+++++.+...+..
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~~~~~~-----~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMVHQLMK-----DNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHHHHHhh-----cCCCEEEEEEEEecCCee
Confidence 456666665 9999999999999999999999998754221 11333332222 489999999999999999
Q ss_pred EEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcc-eEEEeeCCC
Q 005415 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC-EIKIIDLGS 569 (697)
Q Consensus 492 ~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~-~vKL~DFGl 569 (697)
++||||++ ++|.+++.... .+++..+..++.||++||.|||+.|++||||||+||+++. ++ .++|+|||+
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~~l~dfg~ 156 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR--AKDRIYLCDYGL 156 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC--CCCeEEEecCcc
Confidence 99999997 57877775432 2899999999999999999999999999999999999986 45 899999999
Q ss_pred ccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHHHHhhCCCCHHHHhhcc
Q 005415 570 SCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI-LARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 570 a~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~-l~~I~~~lg~~p~e~~~~~~ 648 (697)
+....... ...++..|+|||++.+..++.++|+||||+++|+|++|..||........ ...+..... .+....
T Consensus 157 ~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~---- 230 (267)
T PHA03390 157 CKIIGTPS-CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ-KKLPFI---- 230 (267)
T ss_pred ceecCCCc-cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc-ccCCcc----
Confidence 87654332 34678899999999998899999999999999999999999986543321 111111111 000000
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccC-HHHHH--Hhhc
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLT-LEYAA--LWLF 690 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t-~e~~~--~wl~ 690 (697)
+ .....+..++. +++...|..|.+ .++++ +|+.
T Consensus 231 ---~--~~~~~~~~li~----~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 231 ---K--NVSKNANDFVQ----SMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred ---c--ccCHHHHHHHH----HHhccChhhCCchHHHHhcCCccc
Confidence 0 12234444444 444455888986 58888 9986
No 317
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=1.1e-29 Score=265.64 Aligned_cols=260 Identities=22% Similarity=0.271 Sum_probs=189.8
Q ss_pred CceEEEEEeccCCCCceEEEE----ECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQ----DLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~----d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
.+|++++.||+|+||.||++. +..+++.||+|.+.... .....+.+|+.+++.++ ||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~ 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ------HDNIVKYKGVCYSA 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC------CCCeeEEEEEEccC
Confidence 579999999999999999997 45678899999987543 33456778888888774 78999999987543
Q ss_pred --CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 489 --EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 489 --~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
..+++||||+. ++|.+++..... .+++..+..++.|++.||.|||++||+||||||+||+++. ++.++|+
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~--~~~~~l~ 150 (284)
T cd05081 78 GRRNLRLVMEYLPYGSLRDYLQKHRE-----RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVES--ENRVKIG 150 (284)
T ss_pred CCCceEEEEEecCCCCHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECC--CCeEEEC
Confidence 46899999996 577777653321 2788999999999999999999999999999999999985 7889999
Q ss_pred eCCCcccccccccc------ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC-C
Q 005415 566 DLGSSCFQTDNLCL------YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG-P 638 (697)
Q Consensus 566 DFGla~~~~~~~~~------~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg-~ 638 (697)
|||++......... ..++..|+|||++.+..++.++|||||||++|||++|..|+..... .....+..... +
T Consensus 151 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~~~~~~~~ 229 (284)
T cd05081 151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMRMMGNDKQGQ 229 (284)
T ss_pred CCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhhhcccccccc
Confidence 99998765432211 1223459999999988899999999999999999999887754322 11111100000 0
Q ss_pred CC-H---HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 639 ID-L---EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 639 ~p-~---e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
.. . +.+...............+..++..||... |..|+|++++...|..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 230 MIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNND----PSQRPSFSELALQVEA 282 (284)
T ss_pred cchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCC----hhhCCCHHHHHHHHHh
Confidence 00 0 111111111112233456778888888865 8889999998866543
No 318
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=8.8e-31 Score=284.83 Aligned_cols=259 Identities=21% Similarity=0.268 Sum_probs=212.1
Q ss_pred ceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 410 ~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
++-..+..++++||+|.||.|.+++ ...+..||+|+++... .....+..|+++|.+|+ ||||++++++|..
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk------hPNIveLvGVC~~ 606 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDATKNARNDFLKEIKILSRLK------HPNIVELLGVCVQ 606 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccchhHHHHHHHHHHHHhccC------CCCeeEEEeeeec
Confidence 4445678999999999999999998 4557999999998643 34578899999999885 8999999999999
Q ss_pred cCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
++.+++||||++ |+|.+++..+.... .......+|+.||+.||+||.+.++|||||.++|+|++ +++++||+|
T Consensus 607 DePicmI~EYmEnGDLnqFl~aheapt----~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~--~e~~iKiad 680 (807)
T KOG1094|consen 607 DDPLCMITEYMENGDLNQFLSAHELPT----AETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD--GEFTIKIAD 680 (807)
T ss_pred CCchHHHHHHHhcCcHHHHHHhccCcc----cccchhHHHHHHHHHHHHHHHhhchhhccccccceeec--CcccEEecC
Confidence 999999999998 77888887654322 34455667999999999999999999999999999999 499999999
Q ss_pred CCCcccccccccc-----ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 567 LGSSCFQTDNLCL-----YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT--GEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 567 FGla~~~~~~~~~-----~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt--G~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
||+++..-..... .+-+..|||+|.+.-+.++.++|+|+||+++||+++ .+.||....+++.+.+.-+.+...
T Consensus 681 fgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~ 760 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQ 760 (807)
T ss_pred cccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCC
Confidence 9999754333222 344688999999999999999999999999999887 899999988888888877776655
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
+.... ..+.--++..++++|..||... -.+|.+-|++-..|.
T Consensus 761 ~~~~~-----l~~P~~cp~~lyelml~Cw~~e----s~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 761 GRQVV-----LSRPPACPQGLYELMLRCWRRE----SEQRPSFEQLHLFLQ 802 (807)
T ss_pred Cccee-----ccCCCcCcHHHHHHHHHHhchh----hhcCCCHHHHHHHHH
Confidence 55433 2233457789999999999966 566778887764443
No 319
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=4.5e-31 Score=291.14 Aligned_cols=249 Identities=26% Similarity=0.436 Sum_probs=206.6
Q ss_pred cCceE-EEEEeccCCCCceEEEEECCCCcEEEEEEEe-----cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 413 AGRYY-VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK-----NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 413 ~~rY~-i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~-----~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
.+||. ..+.||+|+|-+||+|.|..+|..||--.++ ......+++..|+.+|+.|+ ||||+++|++|.
T Consensus 38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~------H~NIirfy~SW~ 111 (632)
T KOG0584|consen 38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK------HPNIIRFYDSWV 111 (632)
T ss_pred CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC------CCceeeeeehee
Confidence 45654 4578999999999999999999999855443 34455678899999999886 789999999999
Q ss_pred ecCe--EEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcC--ccccCCCCccccccccCcce
Q 005415 487 HLEH--LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCE 561 (697)
Q Consensus 487 ~~~~--l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~g--IvHrDLKP~NILl~~~~~~~ 561 (697)
+... +.+|+|++. |+|..+++..+. +....++.|++||++||.|||++. |+|||||.+||+|+. ..|.
T Consensus 112 d~~n~~in~iTEL~TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG-~~G~ 184 (632)
T KOG0584|consen 112 DTDNKTINFITELFTSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG-NLGE 184 (632)
T ss_pred cCCCceeeeeeecccCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-CcCc
Confidence 8754 889999996 788888876665 788899999999999999999985 999999999999985 6789
Q ss_pred EEEeeCCCccccccccc-cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHhhCCC
Q 005415 562 IKIIDLGSSCFQTDNLC-LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGMLGPI 639 (697)
Q Consensus 562 vKL~DFGla~~~~~~~~-~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~-~~~~e~l~~I~~~lg~~ 639 (697)
|||+|+|+|........ ..+|||.|||||++. ..|...+||||||+.++||+|+..||.. .++.+++.++++.. .
T Consensus 185 VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGi--K 261 (632)
T KOG0584|consen 185 VKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGI--K 261 (632)
T ss_pred eeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCC--C
Confidence 99999999987766543 469999999999998 5789999999999999999999999965 67888999987643 4
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
|..+.. -+++..+.++..|... ...|+++.+++ +++..
T Consensus 262 P~sl~k---------V~dPevr~fIekCl~~-----~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 262 PAALSK---------VKDPEVREFIEKCLAT-----KSERLSAKELLKDPFFDE 301 (632)
T ss_pred HHHhhc---------cCCHHHHHHHHHHhcC-----chhccCHHHHhhChhhcc
Confidence 443321 2467888899999875 57789998888 66553
No 320
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=1.1e-30 Score=272.55 Aligned_cols=250 Identities=26% Similarity=0.333 Sum_probs=194.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
..|++.+.||.|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.+ +||||+++++++......
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~ 77 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSPYITRYYGSYLKGTKL 77 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC------CCCccHhhhcccccCCce
Confidence 3577778899999999999999989999999998743 23345667788877766 488999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+++ +|.+++.. ..+++..++.++.|++.||.|||+++++|+||+|+||+++. ++.++|+|||++
T Consensus 78 ~lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~--~~~~~l~dfg~~ 148 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP-------GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE--QGDVKLADFGVA 148 (277)
T ss_pred EEEEEccCCCcHHHHhhc-------CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeC--CCCEEEcccccc
Confidence 999999985 55555431 12788999999999999999999999999999999999985 788999999998
Q ss_pred ccccccc---ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDNL---CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
....... ....++..|+|||++.+..++.++|+|||||++|+|++|..||...........+.... ++ ..
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~~-~~---- 221 (277)
T cd06642 149 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS--PP-TL---- 221 (277)
T ss_pred ccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC--CC-CC----
Confidence 6644322 22457888999999999889999999999999999999999998665554443332111 11 00
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCC
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~ 694 (697)
.......+..++..||.. .|..|++++++. +|+....+
T Consensus 222 -----~~~~~~~~~~li~~~l~~----~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06642 222 -----EGQYSKPFKEFVEACLNK----DPRFRPTAKELLKHKFITRYTK 261 (277)
T ss_pred -----CcccCHHHHHHHHHHccC----CcccCcCHHHHHHhHHHHHHhh
Confidence 011233566677777764 488899999988 78765443
No 321
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=9.6e-30 Score=264.07 Aligned_cols=248 Identities=25% Similarity=0.357 Sum_probs=188.6
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh-----------hhHhHHHHHHHHHHhcccCCCCCCceeEEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD-----------FFDQSLDEIKLLKLVNKNDPADEHHILRLYD 483 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~-----------~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~ 483 (697)
+|.+.+.||.|++|.||+|.+..+++.||+|.++.... ..+.+..|+.+++.++ ||||+++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~ 75 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD------HLNIVQYLG 75 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC------CCCcceEEE
Confidence 58899999999999999999988999999998863211 1234556777777664 789999999
Q ss_pred EEEecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 484 YFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 484 ~f~~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
++......++||||+.+ +|.+++... ..++...+..++.||+.||.|||+++++|+||+|+||+++. ++.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~--~~~~ 147 (272)
T cd06629 76 FETTEEYLSIFLEYVPGGSIGSCLRTY------GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA--DGIC 147 (272)
T ss_pred EeccCCceEEEEecCCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcC--CCeE
Confidence 99999999999999975 566665433 12788899999999999999999999999999999999985 7899
Q ss_pred EEeeCCCccccccc-----cccccccCCCCCchhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHh
Q 005415 563 KIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 563 KL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~--~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~ 635 (697)
+|+|||++...... .....++..|+|||.+.... ++.++|+||||+++|+|++|..||......+.+..+...
T Consensus 148 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 227 (272)
T cd06629 148 KISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNK 227 (272)
T ss_pred EEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcc
Confidence 99999998654322 12245788899999987654 789999999999999999999999766555444443221
Q ss_pred hCC--CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 636 LGP--IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 636 lg~--~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
... .+.+.. -.-...+..++..||.. .|..|+++++++ +|+
T Consensus 228 ~~~~~~~~~~~---------~~~~~~~~~li~~~l~~----~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 228 RSAPPIPPDVS---------MNLSPVALDFLNACFTI----NPDNRPTARELLQHPFI 272 (272)
T ss_pred ccCCcCCcccc---------ccCCHHHHHHHHHHhcC----ChhhCCCHHHHhhCCCC
Confidence 111 111000 01123455566666654 588899999987 774
No 322
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=4.5e-30 Score=273.11 Aligned_cols=253 Identities=21% Similarity=0.298 Sum_probs=198.9
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.+|...+.||.|++|.||+|+++.++..+|+|.+... .....++.+|+.+++.++ |+|++++++++....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~ 88 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR------HPNTIQYRGCYLREH 88 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC------CCCcccEEEEEEcCC
Confidence 4588889999999999999999999999999998642 223345667888888774 789999999999999
Q ss_pred eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 490 ~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
..++||||+.+++...+..... .+++..+..++.|++.||.|||+++++||||+|+||+++. ++.++|+|||+
T Consensus 89 ~~~lv~e~~~~~l~~~~~~~~~-----~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~ 161 (308)
T cd06634 89 TAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGS 161 (308)
T ss_pred eeEEEEEccCCCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC--CCcEEECCccc
Confidence 9999999999888776653322 2788999999999999999999999999999999999985 78899999999
Q ss_pred ccccccccccccccCCCCCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 570 SCFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 570 a~~~~~~~~~~~gt~~Y~APE~l~---~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
+...... ....+++.|+|||.+. ...++.++|||||||++|+|++|..||...+..+.+..+.....+...
T Consensus 162 ~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 235 (308)
T cd06634 162 ASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ----- 235 (308)
T ss_pred ceeecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcC-----
Confidence 8665432 3356788999999985 345788999999999999999999999876655555444332111100
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccCCC
Q 005415 647 GQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGIDQN 695 (697)
Q Consensus 647 ~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~~n 695 (697)
.......+..++..||... |.+|.+.++++ +|+....++
T Consensus 236 ------~~~~~~~~~~li~~cl~~~----P~~Rp~~~~ll~~~~~~~~~~~ 276 (308)
T cd06634 236 ------SGHWSEYFRNFVDSCLQKI----PQDRPTSEVLLKHRFVLRERPP 276 (308)
T ss_pred ------cccccHHHHHHHHHHhhCC----cccCCCHHHHhhCccccccCCh
Confidence 0122345677788888644 88899999998 888765543
No 323
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=6.2e-30 Score=269.84 Aligned_cols=254 Identities=25% Similarity=0.310 Sum_probs=193.3
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+.|++.+.||+|++|.||+|.+..+++.||||.++... ........|+.++..+. +||||+++++++......
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~~~~ 89 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVKCYGYFITDSDV 89 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhcc-----CCCchHhhheeeecCCeE
Confidence 67999999999999999999998889999999997532 22334455665554432 589999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+++.+..++..... .+++..+..++.|++.||.|||+ .+|+||||+|+||+++. ++.++|+|||++
T Consensus 90 ~~v~e~~~~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~--~~~~kL~dfg~~ 162 (296)
T cd06618 90 FICMELMSTCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA--SGNVKLCDFGIS 162 (296)
T ss_pred EEEeeccCcCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC--CCCEEECccccc
Confidence 99999998877776654322 38889999999999999999997 59999999999999984 789999999998
Q ss_pred ccccccc--ccccccCCCCCchhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHhhCCCCHHH
Q 005415 571 CFQTDNL--CLYVQSRSYRAPEVIIGLP----YDQKIDLWSLGCILAELWTGEVLFPNDAV-VMILARIIGMLGPIDLEM 643 (697)
Q Consensus 571 ~~~~~~~--~~~~gt~~Y~APE~l~~~~----~s~ksDIWSLGviL~ELltG~~PF~~~~~-~e~l~~I~~~lg~~p~e~ 643 (697)
....... ....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||..... .+.+..+.....+..
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 239 (296)
T cd06618 163 GRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSL--- 239 (296)
T ss_pred hhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCC---
Confidence 6543322 2234678899999987653 78899999999999999999999976433 344444432211100
Q ss_pred HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 644 LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 644 ~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.........+..++..||... |..|+++++++ +|+..++
T Consensus 240 -------~~~~~~~~~l~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 240 -------PPNEGFSPDFCSFVDLCLTKD----HRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred -------CCCCCCCHHHHHHHHHHccCC----hhhCCCHHHHhcChhhhccc
Confidence 000012345667777777644 88899999998 8887544
No 324
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=9.7e-30 Score=266.81 Aligned_cols=253 Identities=19% Similarity=0.235 Sum_probs=195.0
Q ss_pred cCceEEEEEeccCCCCceEEEEECC-----CCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~-----~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
.++|++.+.||+|+||.||+|.+.. ++..||+|++.... .....+.+|+.+++.+. ||||+++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~------h~~iv~~~~~~ 77 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD------HPNIVKLLGVC 77 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcC------CCchheEEEEE
Confidence 3679999999999999999998743 67899999987532 33456777888888774 78999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhc----------------cCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCC
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQE----------------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~----------------~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLK 548 (697)
......++||||++ ++|.+++..... ......+++..++.++.||+.||.|||+++++|||||
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~ 157 (288)
T cd05050 78 AVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA 157 (288)
T ss_pred cCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 99999999999998 477777753221 0111237788899999999999999999999999999
Q ss_pred CccccccccCcceEEEeeCCCccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 005415 549 PENILIKSYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPN 622 (697)
Q Consensus 549 P~NILl~~~~~~~vKL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~ 622 (697)
|+||+++. ++.++|+|||++...... ......+..|+|||.+.+..++.++|||||||++|+|++ |..||.+
T Consensus 158 p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 158 TRNCLVGE--NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred HhheEecC--CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999985 788999999998653322 112234567999999998899999999999999999998 8899988
Q ss_pred CcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 623 DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 623 ~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
....+.+..+......+. .-.....+..++..||... |..|++++++..-|
T Consensus 236 ~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~li~~~l~~~----p~~Rpt~~el~~~l 286 (288)
T cd05050 236 MAHEEVIYYVRDGNVLSC------------PDNCPLELYNLMRLCWSKL----PSDRPSFASINRIL 286 (288)
T ss_pred CCHHHHHHHHhcCCCCCC------------CCCCCHHHHHHHHHHcccC----cccCCCHHHHHHHh
Confidence 777776665533211100 0012346777888887655 88899999887443
No 325
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=1e-29 Score=265.23 Aligned_cols=255 Identities=20% Similarity=0.233 Sum_probs=197.4
Q ss_pred cCceEEEEEeccCCCCceEEEEECC----CCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLH----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~----~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
..+|++.+.||+|+||.||+|.+.. ++..|++|++... ......+.+|+.+++.+. ||||+++++++.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~ 78 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS------HQNILPILHVCI 78 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEe
Confidence 4689999999999999999999865 3688999988753 233455677888777763 889999999877
Q ss_pred e-cCeEEEEEEccc-cchHHHHHhhhccC--CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 487 H-LEHLFIVCELLR-ANLYEFQKFNQESG--GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 487 ~-~~~l~LVmEyl~-gsL~~~l~~~~~~~--~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
. ....++++||+. ++|.+++....... ....+++..+..++.|++.||.|||+++++|+||||+||+++. ++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~--~~~~ 156 (280)
T cd05043 79 EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDE--ELQV 156 (280)
T ss_pred cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcC--CCcE
Confidence 6 467899999997 57777765432211 1134889999999999999999999999999999999999985 7899
Q ss_pred EEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhh
Q 005415 563 KIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 563 KL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~l 636 (697)
||+|||+++...... ....++..|+|||++.+..++.++|||||||++|++++ |++||...+..+....+....
T Consensus 157 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 236 (280)
T cd05043 157 KITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY 236 (280)
T ss_pred EECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC
Confidence 999999987543221 11234667999999998889999999999999999999 999998877766555443321
Q ss_pred CCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 637 g~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
.++ ..-.....+..++..||... |..|++++++..+|..
T Consensus 237 -~~~-----------~~~~~~~~~~~li~~~l~~~----p~~Rps~~~~~~~l~~ 275 (280)
T cd05043 237 -RLA-----------QPINCPDELFAVMACCWALD----PEERPSFSQLVQCLTD 275 (280)
T ss_pred -CCC-----------CCCcCCHHHHHHHHHHcCCC----hhhCCCHHHHHHHHHH
Confidence 111 11122456788999999764 7889999999877654
No 326
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=8.5e-30 Score=264.46 Aligned_cols=248 Identities=22% Similarity=0.258 Sum_probs=190.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCC---CcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~---g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
..+|.+.+.||+|+||.||+|.+... ...||||..... ....+.+.+|+.+++.+. ||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD------HPHIVKLIGVITE 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCC------CCchhceeEEEcC
Confidence 46799999999999999999987543 457899988754 334456778888888774 7899999998875
Q ss_pred cCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
...++||||+. ++|.+++..... .+++..++.++.|++.||.|||+.+++|+||||+||+++. .+.++|+|
T Consensus 79 -~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~--~~~~~l~d 150 (270)
T cd05056 79 -NPVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS--PDCVKLGD 150 (270)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec--CCCeEEcc
Confidence 55789999997 567777754321 2789999999999999999999999999999999999985 78899999
Q ss_pred CCCcccccccc----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 567 LGSSCFQTDNL----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 567 FGla~~~~~~~----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
||++....... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+....+.+..+......+.
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~- 229 (270)
T cd05056 151 FGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPM- 229 (270)
T ss_pred CceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCC-
Confidence 99986543321 11223467999999988889999999999999999997 9999988877766665533221111
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
.-.....+..++..||. ..|..|+|+.++...|.
T Consensus 230 -----------~~~~~~~~~~li~~~l~----~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 230 -----------PPNCPPTLYSLMTKCWA----YDPSKRPRFTELKAQLS 263 (270)
T ss_pred -----------CCCCCHHHHHHHHHHcC----CChhhCcCHHHHHHHHH
Confidence 11223456666666664 44778889888775443
No 327
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=1.1e-29 Score=265.99 Aligned_cols=253 Identities=26% Similarity=0.348 Sum_probs=202.5
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.+.|++.+.||+|++|.||++.+..++..|++|++.........+.+|+.+++.++ |+||+++++.+......+
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~ 91 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCK------HPNIVDYYDSYLVGDELW 91 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCC------CCCeeEEEEEEEECCEEE
Confidence 45688999999999999999999888999999999865544566778888887774 789999999999999999
Q ss_pred EEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+|+||+. ++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++. ++.++|+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~--~~~~~l~d~~~~~ 164 (286)
T cd06614 92 VVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK--DGSVKLADFGFAA 164 (286)
T ss_pred EEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcC--CCCEEECccchhh
Confidence 9999998 67877776543 12889999999999999999999999999999999999985 7889999999876
Q ss_pred ccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
..... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+... +.++...
T Consensus 165 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~----- 238 (286)
T cd06614 165 QLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPPLKN----- 238 (286)
T ss_pred hhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCCCcc-----
Confidence 54332 12345678899999999888999999999999999999999999887766555544321 1111100
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
.-..+..+..++..||.. .+..|.++++++ +|+...
T Consensus 239 ----~~~~~~~l~~li~~~l~~----~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 239 ----PEKWSPEFKDFLNKCLVK----DPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred ----hhhCCHHHHHHHHHHhcc----ChhhCcCHHHHhhChHhhcc
Confidence 001234566677777764 488899999998 888763
No 328
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=1.8e-29 Score=264.70 Aligned_cols=246 Identities=25% Similarity=0.369 Sum_probs=180.3
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 005415 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmE 496 (697)
.||+|+||.||++.+..+++.+|+|.+..... ......+|..+++.+.. .+||||+.+++++...+..++|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMTYAFHTPDKLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh---CCCCcEeEEEEEEecCCeEEEEEe
Confidence 48999999999999999999999999875321 11233445555555433 358999999999999999999999
Q ss_pred cccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccc
Q 005415 497 LLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 497 yl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~ 575 (697)
|+.+ +|..++.... .+++..+..++.|++.||.|||+++|+|+||||+|||++. ++.++|+|||++.....
T Consensus 78 ~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~--~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 78 LMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSK 149 (279)
T ss_pred cCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECC--CCCEEEccCCcceeccc
Confidence 9985 4555544221 2899999999999999999999999999999999999985 78899999999865433
Q ss_pred c-cccccccCCCCCchhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 576 N-LCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELWTGEVLFPNDAV--VMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 576 ~-~~~~~gt~~Y~APE~l~-~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~--~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
. .....++..|+|||.+. +..++.++|||||||++|+|++|..||..... ...+..+... .+.. ..
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~~-------~~ 219 (279)
T cd05633 150 KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---VNVE-------LP 219 (279)
T ss_pred cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc---CCcC-------Cc
Confidence 2 23346889999999986 45689999999999999999999999975432 1222222110 0000 00
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccC
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGID 693 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~ 693 (697)
. .....+..++..||... |..|. ++++++ +|..+++
T Consensus 220 ~--~~~~~~~~li~~~l~~~----p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 220 D--SFSPELKSLLEGLLQRD----VSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred c--ccCHHHHHHHHHHhcCC----HHHhcCCCCCCHHHHHhCccccCCC
Confidence 0 11235556666666544 56665 688888 8887754
No 329
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=4.9e-30 Score=277.50 Aligned_cols=256 Identities=22% Similarity=0.277 Sum_probs=190.0
Q ss_pred ecCceEEEEEeccCCCCceEEEEE-----CCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQD-----LHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d-----~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~ 484 (697)
-.++|++.+.||+|+||.||+|.+ ..+++.||||+++... .....+.+|+.++..+. +||||++++++
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~ 79 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLNVVNLLGA 79 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc-----CCccHhhhcce
Confidence 357899999999999999999985 3467899999997532 33456778999998885 37899999998
Q ss_pred EEec-CeEEEEEEccc-cchHHHHHhhhccC-------------------------------------------------
Q 005415 485 FYHL-EHLFIVCELLR-ANLYEFQKFNQESG------------------------------------------------- 513 (697)
Q Consensus 485 f~~~-~~l~LVmEyl~-gsL~~~l~~~~~~~------------------------------------------------- 513 (697)
+... ..+++||||+. ++|.+++.......
T Consensus 80 ~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 80 CTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred eecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 8654 56899999997 56766665321100
Q ss_pred ------------CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccccc----
Q 005415 514 ------------GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL---- 577 (697)
Q Consensus 514 ------------~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~---- 577 (697)
....+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~ 237 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVR 237 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC--CCcEEEEecccccccccCcchhh
Confidence 0123677888899999999999999999999999999999985 7889999999987543221
Q ss_pred -ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccccccc
Q 005415 578 -CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKYFT 655 (697)
Q Consensus 578 -~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~ 655 (697)
....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+......+...+.....++. .. .
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------~~--~ 306 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA---------PD--Y 306 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCC---------CC--C
Confidence 11234567999999998889999999999999999997 99999876543333222211111110 11 1
Q ss_pred CCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 656 KEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 656 ~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
....+..++..||+.. |..|++++++..-|
T Consensus 307 ~~~~~~~~~~~cl~~~----p~~Rps~~eil~~l 336 (343)
T cd05103 307 TTPEMYQTMLDCWHGE----PSQRPTFSELVEHL 336 (343)
T ss_pred CCHHHHHHHHHHccCC----hhhCcCHHHHHHHH
Confidence 2346788888888764 77788888877433
No 330
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=1e-29 Score=281.56 Aligned_cols=253 Identities=22% Similarity=0.301 Sum_probs=194.0
Q ss_pred cCceEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~-----~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
.++|.+.++||+|+||.||+|.+. ..++.||||+++... .....+..|++++..+. .||||+++++++
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-----~H~niv~~~~~~ 110 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG-----PHLNIVNLLGAC 110 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC-----CCCCeEEEEEEE
Confidence 457889999999999999999853 345789999997542 22346778999888874 378999999999
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhcc----------------------------------------------------
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQES---------------------------------------------------- 512 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~~---------------------------------------------------- 512 (697)
......++||||+. ++|.+++......
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 99999999999997 5777777543210
Q ss_pred ----------------------------------------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccc
Q 005415 513 ----------------------------------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENI 552 (697)
Q Consensus 513 ----------------------------------------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NI 552 (697)
.....+++..+..++.||+.||.|||+.+|+||||||+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni 270 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV 270 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence 0112367778899999999999999999999999999999
Q ss_pred cccccCcceEEEeeCCCccccccc-----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHH
Q 005415 553 LIKSYQRCEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVV 626 (697)
Q Consensus 553 Ll~~~~~~~vKL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~ 626 (697)
|++. .+.+||+|||++...... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 271 Ll~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 271 LICE--GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred EEeC--CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 9985 788999999998754221 112345778999999998889999999999999999998 99999876655
Q ss_pred HHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 627 MILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 627 e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
+.+...+.....++ ........+..++..||... |..|+++++++.
T Consensus 349 ~~~~~~~~~~~~~~-----------~p~~~~~~l~~li~~cl~~~----P~~RPs~~ell~ 394 (401)
T cd05107 349 EQFYNAIKRGYRMA-----------KPAHASDEIYEIMQKCWEEK----FEIRPDFSQLVH 394 (401)
T ss_pred HHHHHHHHcCCCCC-----------CCCCCCHHHHHHHHHHcCCC----hhHCcCHHHHHH
Confidence 55444332211111 01123457888999999865 677777777763
No 331
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=1.4e-29 Score=264.94 Aligned_cols=251 Identities=24% Similarity=0.294 Sum_probs=193.4
Q ss_pred cCceEEEEEeccCCCCceEEEEEC-----CCCcEEEEEEEecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDL-----HTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~-----~~g~~VAVKii~~~-~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
..+|.+.++||+|+||.||++... .++..+|+|.+... ......+.+|+.+++.++ |+||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~ 77 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ------HQHIVRFYGVCT 77 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCC------CCCCceEEEEEe
Confidence 357889999999999999999742 35678999988743 233456778888887764 789999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhc---------cCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQE---------SGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS 556 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~---------~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~ 556 (697)
.....++||||+. ++|.+++..... ......+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~ 157 (280)
T cd05092 78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ 157 (280)
T ss_pred cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC
Confidence 9999999999997 567666653321 001123788999999999999999999999999999999999985
Q ss_pred cCcceEEEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHH
Q 005415 557 YQRCEIKIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILA 630 (697)
Q Consensus 557 ~~~~~vKL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~ 630 (697)
++.++|+|||++....... ....+++.|+|||.+.+..++.++|||||||++|+|++ |.+||......+.+.
T Consensus 158 --~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 235 (280)
T cd05092 158 --GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIE 235 (280)
T ss_pred --CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence 7889999999986543221 12234678999999999999999999999999999998 999998877766665
Q ss_pred HHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 631 RIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 631 ~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
.+........ .......+..++..||... |..|.+++++..
T Consensus 236 ~~~~~~~~~~------------~~~~~~~~~~li~~cl~~~----P~~Rp~~~~l~~ 276 (280)
T cd05092 236 CITQGRELER------------PRTCPPEVYAIMQGCWQRE----PQQRMVIKDIHS 276 (280)
T ss_pred HHHcCccCCC------------CCCCCHHHHHHHHHHccCC----hhhCCCHHHHHH
Confidence 5543221110 0123456778888888755 788888887763
No 332
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=1.3e-29 Score=260.64 Aligned_cols=243 Identities=25% Similarity=0.326 Sum_probs=189.1
Q ss_pred EEeccCCCCceEEEEECC-CC--cEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLH-TG--VDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~-~g--~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
+.||+|++|.||+|.+.. .+ ..||||.+..... ....+..|+.+++.++ ||||+++++.+.. ...++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~-~~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD------HENLIRLYGVVLT-HPLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcC------CCCccceeEEEcC-CeEEEE
Confidence 368999999999999865 33 3699999986543 4456777888888774 7899999999988 889999
Q ss_pred EEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 495 CELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 495 mEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
|||+. ++|.+.+..... ..+++..++.++.|++.||.|||+++++|+||+|+||+++. ++.+||+|||++...
T Consensus 74 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~--~~~~kl~dfg~~~~~ 147 (257)
T cd05040 74 TELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS--DDKVKIGDFGLMRAL 147 (257)
T ss_pred EEecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec--CCEEEeccccccccc
Confidence 99996 577777654331 23889999999999999999999999999999999999996 689999999998765
Q ss_pred cccc------ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 574 TDNL------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 574 ~~~~------~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
.... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+.+..+......++
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~------ 221 (257)
T cd05040 148 PQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE------ 221 (257)
T ss_pred cccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC------
Confidence 4321 12345678999999998899999999999999999999 9999988877776666543211111
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 647 GQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 647 ~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
........+..++..||... |..|++++++..+|.
T Consensus 222 -----~~~~~~~~~~~li~~~l~~~----p~~Rps~~~~~~~l~ 256 (257)
T cd05040 222 -----RPEACPQDIYNVMLQCWAHN----PADRPTFAALREFLP 256 (257)
T ss_pred -----CCccCCHHHHHHHHHHCCCC----cccCCCHHHHHHHhc
Confidence 00112345666777776654 788999988876653
No 333
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=1.5e-29 Score=262.76 Aligned_cols=246 Identities=19% Similarity=0.195 Sum_probs=182.5
Q ss_pred EeccCCCCceEEEEEC--CCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 005415 421 YLGSAAFSKVFQAQDL--HTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~--~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmE 496 (697)
.||+|+||.||+|.+. .++..+|+|.++... .....+.+|+.+++.++ ||||+++++++......++|||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e 75 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQ------HSNLLQCLGQCTEVTPYLLVME 75 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCC------CCCEeeEEEEEcCCCCcEEEEE
Confidence 5899999999999764 355789999887543 22345677888887764 8899999999999899999999
Q ss_pred ccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccc
Q 005415 497 LLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 497 yl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~ 575 (697)
|+. ++|.+++...... .....++..++.++.|++.||.|||+++++|+||||+||+++. .+.++|+|||.+.....
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTA--DLTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEECCccccccccC
Confidence 998 5676666543321 1223567788899999999999999999999999999999985 78899999999865332
Q ss_pred cc-----ccccccCCCCCchhhcCC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhh-CCCCH
Q 005415 576 NL-----CLYVQSRSYRAPEVIIGL-------PYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML-GPIDL 641 (697)
Q Consensus 576 ~~-----~~~~gt~~Y~APE~l~~~-------~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~l-g~~p~ 641 (697)
.. ....++..|+|||++.+. .++.++|||||||++|||++ |..||......+.....+... .+.+.
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (269)
T cd05087 153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK 232 (269)
T ss_pred cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCC
Confidence 21 123457789999998642 35789999999999999996 999998776665544433211 11111
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHh
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALW 688 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~w 688 (697)
... .......+..+|..||. .|..|+|++++..-
T Consensus 233 ~~~--------~~~~~~~~~~l~~~c~~-----~P~~Rpt~~~l~~~ 266 (269)
T cd05087 233 PRL--------KLPLSDRWYEVMQFCWL-----QPEQRPSAEEVHLL 266 (269)
T ss_pred Ccc--------CCCCChHHHHHHHHHhc-----CcccCCCHHHHHHH
Confidence 110 01123457789999983 38899999988743
No 334
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=3.2e-29 Score=255.96 Aligned_cols=245 Identities=28% Similarity=0.374 Sum_probs=195.3
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++.+.||+|++|.||++.+..+++.|++|.+.... .....+.+|++++..++ |||++++++++......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK------HPNIVKYIGSIETSDSL 74 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCC------CCCccEEEEEEEeCCEE
Confidence 5899999999999999999999899999999997654 34566778888888774 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+.+ +|.+++.... .+++..+..++.|++.||.+||+.||+|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~~l~d~~~~ 146 (254)
T cd06627 75 YIILEYAENGSLRQIIKKFG------PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK--DGVVKLADFGVA 146 (254)
T ss_pred EEEEecCCCCcHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC--CCCEEEeccccc
Confidence 999999975 6666665331 2889999999999999999999999999999999999995 788999999998
Q ss_pred cccccccc---cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDNLC---LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~~~---~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
........ ...++..|+|||.+.+..++.++|+||||+++|+|++|..||........+..+.....+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------- 219 (254)
T cd06627 147 TKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPL------- 219 (254)
T ss_pred eecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCC-------
Confidence 76554332 34678889999999888889999999999999999999999987765555544432111000
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.. .-...+..++..||. ..|..|.++++++ +|+
T Consensus 220 ---~~--~~~~~~~~~i~~~l~----~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 220 ---PE--GISPELKDFLMQCFQ----KDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ---CC--CCCHHHHHHHHHHHh----CChhhCcCHHHHhcCCCC
Confidence 00 112355666666665 4588899999887 664
No 335
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=1.6e-29 Score=258.92 Aligned_cols=241 Identities=23% Similarity=0.301 Sum_probs=187.8
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
++||.|++|.||++.+.. ++.||+|.+..... ....+..|+.+++.+. |+||+++++++......++||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~v~e~ 73 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD------HPNIVKLIGVCVQKQPIYIVMEL 73 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCeEEEEEEEecCCCeEEEEEc
Confidence 369999999999999877 99999999875432 3456777888888764 78999999999999999999999
Q ss_pred cc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+. ++|.+++..... .++...+..++.|++.||.|||+++++||||+|+||+++. ++.++|+|||.+......
T Consensus 74 ~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~--~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 74 VPGGSLLTFLRKKKN-----RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE--NNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC--CCcEEEeeccccccccCC
Confidence 96 456666543221 2788899999999999999999999999999999999985 788999999998755422
Q ss_pred cc-----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc
Q 005415 577 LC-----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 577 ~~-----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
.. ....+..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+......+.+
T Consensus 147 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~--------- 217 (251)
T cd05041 147 IYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAP--------- 217 (251)
T ss_pred cceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCC---------
Confidence 11 1222456999999998889999999999999999999 89999887766555554332111110
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
......+..++..||. ..|..|+++++++.+|.
T Consensus 218 ---~~~~~~~~~li~~~l~----~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 ---QLCPEEIYRLMLQCWA----YDPENRPSFSEIYNELQ 250 (251)
T ss_pred ---ccCCHHHHHHHHHHhc----cChhhCcCHHHHHHHhh
Confidence 1123456677777775 45888999999987764
No 336
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=1.6e-29 Score=263.95 Aligned_cols=246 Identities=27% Similarity=0.367 Sum_probs=193.0
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
-|++.+.||.|+||.||+|.+..+++.||||++.... .....+.+|+.+++.++ ||||+++++++......+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~ 78 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD------SPYVTKYYGSYLKDTKLW 78 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcC------CCCEeEEEEEEEeCCeEE
Confidence 3778899999999999999998899999999986432 23345667777777664 789999999999999999
Q ss_pred EEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
+||||+++ +|.+++.. ..+++..+..++.|++.||.+||+.|++|+||+|+||+++. ++.++|+|||++.
T Consensus 79 lv~e~~~~~~l~~~i~~-------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~--~~~~~l~dfg~~~ 149 (277)
T cd06641 79 IIMEYLGGGSALDLLEP-------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAG 149 (277)
T ss_pred EEEEeCCCCcHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECC--CCCEEEeecccce
Confidence 99999985 45555431 12789999999999999999999999999999999999985 7889999999886
Q ss_pred ccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcc
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQ 648 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~ 648 (697)
..... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+... ..+..
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~------- 221 (277)
T cd06641 150 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN-NPPTL------- 221 (277)
T ss_pred ecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-CCCCC-------
Confidence 54332 12245788899999998888899999999999999999999999877665555544221 11100
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 649 EIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 649 ~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
. ......+..++..||.. -|..|.+++++. +|+..
T Consensus 222 --~--~~~~~~~~~~i~~~l~~----~p~~Rp~~~~~l~~~~~~~ 258 (277)
T cd06641 222 --E--GNYSKPLKEFVEACLNK----EPSFRPTAKELLKHKFIVR 258 (277)
T ss_pred --C--cccCHHHHHHHHHHccC----ChhhCcCHHHHHhCHHHhh
Confidence 0 01234566777777753 378899999888 78763
No 337
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=6.7e-31 Score=293.60 Aligned_cols=236 Identities=22% Similarity=0.293 Sum_probs=201.1
Q ss_pred CceEEEEEeccCCCCceEEEEECCCC---cEEEEEEEec--chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTG---VDVCLKIIKN--DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g---~~VAVKii~~--~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
...+|.++||.|-||.|++|+.+..| ..||||.++. .......++.|..|+-+. +||||++|.|+....
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF------dHPNIIrLEGVVTks 702 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF------DHPNIIRLEGVVTKS 702 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC------CCCcEEEEEEEEecC
Confidence 45788999999999999999977655 5799999985 345556777777777655 599999999999999
Q ss_pred CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
..++||+|||+ |.|..++..+... |+..++..+++.|+.||.||-+.+.|||||..+|||+++ +...|++||
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~~DGq-----ftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs--nLvCKVsDF 775 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS--NLVCKVSDF 775 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhhcCCc-----eEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc--ceEEEeccc
Confidence 99999999998 6777777755432 888999999999999999999999999999999999996 888999999
Q ss_pred CCcccccccccc----ccc--cCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 568 GSSCFQTDNLCL----YVQ--SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 568 Gla~~~~~~~~~----~~g--t~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
|+++...+.... ..| +..|.|||.|....++.++||||+|+++||.++ |+.||.+-++++++..|.+..+-||
T Consensus 776 GLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPp 855 (996)
T KOG0196|consen 776 GLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPP 855 (996)
T ss_pred cceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCC
Confidence 999887554322 122 467999999999999999999999999999998 9999999999999999977666444
Q ss_pred HHHHhhcccccccccCCchhhhhHHHHHHHHHHH
Q 005415 641 LEMLMQGQEIYKYFTKEYDLYYINEVCFANIFIS 674 (697)
Q Consensus 641 ~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~ 674 (697)
+ .+++..|+++|.+||++....
T Consensus 856 P------------mDCP~aL~qLMldCWqkdR~~ 877 (996)
T KOG0196|consen 856 P------------MDCPAALYQLMLDCWQKDRNR 877 (996)
T ss_pred C------------CCCcHHHHHHHHHHHHHHhhc
Confidence 3 588899999999999987443
No 338
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=2.6e-29 Score=268.05 Aligned_cols=248 Identities=22% Similarity=0.295 Sum_probs=194.9
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
.|...+.||+|+||+||+|.+..+++.|++|++.... .....+..|+.+++.++ |||++++++++.....
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~ 95 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK------HPNTIEYKGCYLKEHT 95 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC------CCCCccEEEEEEeCCE
Confidence 4777888999999999999999999999999987432 22345667777777764 7899999999999999
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
.++||||+.+++.+++..... .+++..+..++.||+.||.|||++||+|+||+|+||+++. ++.++|+|||++
T Consensus 96 ~~lv~e~~~~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~--~~~~kL~dfg~~ 168 (313)
T cd06633 96 AWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSA 168 (313)
T ss_pred EEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC--CCCEEEeecCCC
Confidence 999999999988877754322 2788999999999999999999999999999999999985 788999999988
Q ss_pred cccccccccccccCCCCCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDNLCLYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~~~~~~gt~~Y~APE~l~---~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
..... .....++..|+|||++. ...++.++|||||||++|+|++|..||...+....+..+..... +...
T Consensus 169 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~---- 241 (313)
T cd06633 169 SKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLQ---- 241 (313)
T ss_pred cccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCC----
Confidence 65432 23456788999999984 35588899999999999999999999988776666655533211 1100
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
.. .....+..++..||... |..|.++++++ +|+.-
T Consensus 242 ---~~--~~~~~l~~li~~~l~~~----P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 242 ---SN--EWTDSFRGFVDYCLQKI----PQERPASAELLRHDFVRR 278 (313)
T ss_pred ---cc--ccCHHHHHHHHHHccCC----hhhCcCHHHHhcCcccCC
Confidence 00 11234566667676654 78899999888 88764
No 339
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=4.7e-29 Score=258.29 Aligned_cols=243 Identities=26% Similarity=0.323 Sum_probs=186.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc------hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~------~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
.+|++.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.++ |+||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~~ 75 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR------HDRIVQYYGCLRD 75 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC------CCCcceEEEEEEc
Confidence 4699999999999999999999999999999987532 223356677888888875 7899999999876
Q ss_pred c--CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEE
Q 005415 488 L--EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (697)
Q Consensus 488 ~--~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL 564 (697)
. ..+++||||+.+ +|.+.+.... .+++..+..++.|++.||.|||+++++|+||||+||+++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l 147 (264)
T cd06653 76 PEEKKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS--AGNVKL 147 (264)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEE
Confidence 4 568899999975 5666654322 2778889999999999999999999999999999999985 778999
Q ss_pred eeCCCcccccc------ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCC
Q 005415 565 IDLGSSCFQTD------NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 565 ~DFGla~~~~~------~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
+|||++..... ......++..|+|||.+.+..++.++|+|||||++|+|++|+.||........+.++. ..
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~ 224 (264)
T cd06653 148 GDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA---TQ 224 (264)
T ss_pred CccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH---cC
Confidence 99999875432 1123457889999999998889999999999999999999999998776555444432 21
Q ss_pred CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 639 IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 639 ~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
+..... .. .-...+..++..||.. +..|.+.++..
T Consensus 225 ~~~~~~------p~--~~~~~~~~~i~~~l~~-----~~~r~~~~~~~ 259 (264)
T cd06653 225 PTKPML------PD--GVSDACRDFLKQIFVE-----EKRRPTAEFLL 259 (264)
T ss_pred CCCCCC------Cc--ccCHHHHHHHHHHhcC-----cccCccHHHHh
Confidence 111111 00 1112455555666653 57788887665
No 340
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=1.4e-29 Score=260.00 Aligned_cols=237 Identities=20% Similarity=0.235 Sum_probs=178.3
Q ss_pred EEeccCCCCceEEEEECCCC----------cEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 420 EYLGSAAFSKVFQAQDLHTG----------VDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g----------~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
+.||+|+||.||+|.+..++ ..|++|++.........+.+|+.+++.++ ||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~-~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLS------HKHLVKLYGVCVR-D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCC------CcchhheeeEEec-C
Confidence 46899999999999987766 45888887765443566777888777664 7899999999988 7
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc-----ceEE
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-----CEIK 563 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~-----~~vK 563 (697)
..++||||+.+ +|.+++..... .+++..+..++.||+.||.|||+++|+||||||+|||++.... ..+|
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEE
Confidence 78999999985 55555554332 2888999999999999999999999999999999999985221 1799
Q ss_pred EeeCCCccccccccccccccCCCCCchhhcCC--CCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 564 IIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 564 L~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~--~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
|+|||++..... .....++..|+|||++.+. .++.++|||||||++|+|++ |..||...+......... .....+
T Consensus 149 l~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~ 226 (259)
T cd05037 149 LSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLP 226 (259)
T ss_pred eCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCC
Confidence 999999876544 2234567789999999876 78999999999999999999 688887665333222221 100000
Q ss_pred HHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 641 LEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 641 ~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
......+..++..||... |..|+++.+++.
T Consensus 227 -------------~~~~~~~~~li~~~l~~~----p~~Rpt~~~il~ 256 (259)
T cd05037 227 -------------MPDCAELANLINQCWTYD----PTKRPSFRAILR 256 (259)
T ss_pred -------------CCCchHHHHHHHHHhccC----hhhCCCHHHHHH
Confidence 011146677788888644 777888887764
No 341
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=3e-29 Score=256.83 Aligned_cols=240 Identities=23% Similarity=0.305 Sum_probs=185.2
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
++||+|+||.||+|.. .++..||+|+++... .....+.+|+.+++.+ +||||+++++++......++||||
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~lv~e~ 73 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQY------DHPNIVKLIGVCTQRQPIYIVMEL 73 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC------CCCCcCeEEEEEecCCccEEEEEC
Confidence 3689999999999985 468899999987542 2234567788887776 488999999999999999999999
Q ss_pred cc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+. ++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++. ++.++|+|||++......
T Consensus 74 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 74 VPGGDFLSFLRKKK-----DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE--NNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC--CCeEEECCCccceecccc
Confidence 97 45666554322 12788999999999999999999999999999999999985 788999999998654332
Q ss_pred cc----cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 577 LC----LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 577 ~~----~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
.. ...++..|+|||++.+..++.++||||||+++|+|++ |..||.+.........+...... .
T Consensus 147 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~------------~ 214 (250)
T cd05085 147 IYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM------------S 214 (250)
T ss_pred ccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC------------C
Confidence 21 1233567999999988889999999999999999998 99999888776655554322110 0
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
........+..++..||.. .|..|++++++..-|
T Consensus 215 ~~~~~~~~~~~li~~~l~~----~p~~Rp~~~~l~~~l 248 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDY----KPENRPKFSELQKEL 248 (250)
T ss_pred CCCCCCHHHHHHHHHHccc----CcccCCCHHHHHHHh
Confidence 0112235677777777764 488899998887433
No 342
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=2.1e-29 Score=266.10 Aligned_cols=250 Identities=26% Similarity=0.365 Sum_probs=194.7
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~-~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
.++|.+.+.||+|+||.||++.+..++..||+|.+... ......+.+|+.+++.+ +||||+++++++...+..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~~~~~ 91 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN------KHPNIVNYLDSYLVGDEL 91 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc------CCCCeeehhheeeeCCcE
Confidence 37899999999999999999999889999999998643 23335567777777765 388999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++|+||+.+ +|.+++... .+++..+..++.|++.||.|||++|++|+||+|+||+++. ++.++|+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~--~~~~kL~dfg~~ 162 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 162 (293)
T ss_pred EEEEecCCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC--CCCEEEccCcce
Confidence 999999974 666655421 2778899999999999999999999999999999999985 778999999987
Q ss_pred cccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhc
Q 005415 571 CFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQG 647 (697)
Q Consensus 571 ~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~ 647 (697)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|..||...+....+..+.. .+.+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~~~----- 236 (293)
T cd06647 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPELQ----- 236 (293)
T ss_pred ecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCCCCC-----
Confidence 654332 2234678889999999888899999999999999999999999987766544333211 1111100
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhcc
Q 005415 648 QEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFG 691 (697)
Q Consensus 648 ~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~ 691 (697)
....-...+..+++.||... +..|.+.+++. +|+..
T Consensus 237 ----~~~~~~~~l~~li~~~l~~~----p~~Rp~~~~il~h~~~~~ 274 (293)
T cd06647 237 ----NPEKLSAIFRDFLNRCLEMD----VEKRGSAKELLQHPFLKI 274 (293)
T ss_pred ----CccccCHHHHHHHHHHccCC----hhhCcCHHHHhcCHHHhc
Confidence 00011235667777777654 77788999988 88863
No 343
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8.6e-31 Score=289.18 Aligned_cols=233 Identities=26% Similarity=0.377 Sum_probs=196.1
Q ss_pred CceEEEEEeccCCCCceEEEEECCC---CcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHT---GVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~---g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
++.++.++||+|.||.|++|.|... ...||||+++.+.. ..+.+++|+.++..|+ |+|+++|||+..+
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~------H~hliRLyGvVl~- 182 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQ------HPHLIRLYGVVLD- 182 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhcc------CcceeEEeeeecc-
Confidence 4567789999999999999998653 35689999986542 4678889999888875 8899999999987
Q ss_pred CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
..+.+|||++. |+|++.+.... ...|....+..++.||+.||.||.++++|||||..+|+|+.+ ...|||+||
T Consensus 183 qp~mMV~ELaplGSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas--prtVKI~DF 256 (1039)
T KOG0199|consen 183 QPAMMVFELAPLGSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS--PRTVKICDF 256 (1039)
T ss_pred chhhHHhhhcccchHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc--cceeeeecc
Confidence 78899999998 67888776522 233888899999999999999999999999999999999996 778999999
Q ss_pred CCcccccccccccc------ccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCC
Q 005415 568 GSSCFQTDNLCLYV------QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPID 640 (697)
Q Consensus 568 Gla~~~~~~~~~~~------gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p 640 (697)
|+.+........++ -...|+|||.+....++.++|+|++||+||||+| |+.||.|....++|.+|-
T Consensus 257 GLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD------- 329 (1039)
T KOG0199|consen 257 GLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID------- 329 (1039)
T ss_pred cceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-------
Confidence 99987765543332 2456999999999999999999999999999999 999999999999998872
Q ss_pred HHHHhhcccccccccCCchhhhhHHHHHHHH
Q 005415 641 LEMLMQGQEIYKYFTKEYDLYYINEVCFANI 671 (697)
Q Consensus 641 ~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l 671 (697)
.+.++.+.-.+..++|.+|.+||+-.
T Consensus 330 -----~~erLpRPk~csedIY~imk~cWah~ 355 (1039)
T KOG0199|consen 330 -----AGERLPRPKYCSEDIYQIMKNCWAHN 355 (1039)
T ss_pred -----ccccCCCCCCChHHHHHHHHHhccCC
Confidence 33444455567889999999999855
No 344
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=280.51 Aligned_cols=209 Identities=31% Similarity=0.440 Sum_probs=171.3
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhh--------HhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFF--------DQSLDEIKLLKLVNKNDPADEHHILRLY 482 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~--------~~~~~Ei~iL~~L~~~~~~~hpnIv~l~ 482 (697)
.+..||.++.+||+|+|+.||+|.|....++||+|+-...+.+. ....+|..|.+.| +||.||++|
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL------DHpRIVKlY 533 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL------DHPRIVKLY 533 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc------Ccceeeeee
Confidence 56789999999999999999999999999999999987554443 3445666666665 588999999
Q ss_pred EEEEec-CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcC--ccccCCCCcccccccc-C
Q 005415 483 DYFYHL-EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSY-Q 558 (697)
Q Consensus 483 ~~f~~~-~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~g--IvHrDLKP~NILl~~~-~ 558 (697)
++|.-. +.+|-|+|||+|+.+++....... +++.+++.|+.||+.||.||.+.. |||-||||.|||+... .
T Consensus 534 DyfslDtdsFCTVLEYceGNDLDFYLKQhkl-----mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gta 608 (775)
T KOG1151|consen 534 DYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL-----MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTA 608 (775)
T ss_pred eeeeeccccceeeeeecCCCchhHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcc
Confidence 999855 668999999999877766544433 899999999999999999999864 9999999999999642 2
Q ss_pred cceEEEeeCCCcccccccc----------ccccccCCCCCchhhcCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCc
Q 005415 559 RCEIKIIDLGSSCFQTDNL----------CLYVQSRSYRAPEVIIGL----PYDQKIDLWSLGCILAELWTGEVLFPNDA 624 (697)
Q Consensus 559 ~~~vKL~DFGla~~~~~~~----------~~~~gt~~Y~APE~l~~~----~~s~ksDIWSLGviL~ELltG~~PF~~~~ 624 (697)
-|.+||+|||++..+.+.. ....||.+|++||.+.-. ..+.++||||+|||+|.++.|+.||..+-
T Consensus 609 cGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq 688 (775)
T KOG1151|consen 609 CGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ 688 (775)
T ss_pred cceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch
Confidence 4689999999998865432 235789999999998533 37889999999999999999999997653
Q ss_pred -HHHHHH
Q 005415 625 -VVMILA 630 (697)
Q Consensus 625 -~~e~l~ 630 (697)
..+++.
T Consensus 689 sQQdILq 695 (775)
T KOG1151|consen 689 SQQDILQ 695 (775)
T ss_pred hHHHHHh
Confidence 344444
No 345
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=3.2e-29 Score=263.45 Aligned_cols=249 Identities=24% Similarity=0.331 Sum_probs=196.6
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
+|...+.||.|++|.||++.+..+++.+++|.+.... .....+.+|+.+++.+. ||||+++++++...+..++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~------h~~vv~~~~~~~~~~~~~~ 93 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HPNIVEMYSSYLVGDELWV 93 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcC------CCChheEEEEEEcCCeEEE
Confidence 4555679999999999999998999999999886432 23345677888877764 7899999999999999999
Q ss_pred EEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
|+||+.+ +|.+++.. . .++...+..++.|++.||.|||++||+||||+|+||+++. ++.++|+|||.+..
T Consensus 94 v~e~~~~~~L~~~~~~-~------~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~d~g~~~~ 164 (285)
T cd06648 94 VMEFLEGGALTDIVTH-T------RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS--DGRVKLSDFGFCAQ 164 (285)
T ss_pred EEeccCCCCHHHHHHh-C------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcC--CCcEEEcccccchh
Confidence 9999975 66665543 1 2788899999999999999999999999999999999985 78999999998764
Q ss_pred cccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccc
Q 005415 573 QTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (697)
Q Consensus 573 ~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~ 649 (697)
.... .....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+....+..+.....+..
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 235 (285)
T cd06648 165 VSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKL--------- 235 (285)
T ss_pred hccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCC---------
Confidence 4322 2234678899999999988899999999999999999999999988777766666544311111
Q ss_pred ccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhccc
Q 005415 650 IYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGI 692 (697)
Q Consensus 650 ~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~ 692 (697)
.........+..++..||. ..|..|.+.++++ +|+...
T Consensus 236 -~~~~~~~~~l~~li~~~l~----~~p~~Rpt~~~il~~~~~~~~ 275 (285)
T cd06648 236 -KNLHKVSPRLRSFLDRMLV----RDPAQRATAAELLNHPFLAKA 275 (285)
T ss_pred -cccccCCHHHHHHHHHHcc----cChhhCcCHHHHccCcccccC
Confidence 0111123467778888875 4488899999998 887643
No 346
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-30 Score=256.79 Aligned_cols=251 Identities=24% Similarity=0.272 Sum_probs=192.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec---
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--- 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--- 488 (697)
++||+|.+.||.|||+.||+++...++..+|+|.+.... ...+..++|+...++++ |||+++++++...+
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~------s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFN------SPNVLRLVDHQLREEKD 93 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhC------CcchHHHHHHHHHhhcc
Confidence 589999999999999999999999999999999887544 56677888888888876 68999999887644
Q ss_pred --CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcC--ccccCCCCccccccccCcceEE
Q 005415 489 --EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 489 --~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~g--IvHrDLKP~NILl~~~~~~~vK 563 (697)
...||+++|.. |+|.+.+......+ ..+++.++..|+.+|++||.+||+.. .+||||||.|||+.. .+.++
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg--~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~--~~~~v 169 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKG--NFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD--SGLPV 169 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcC--CccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC--CCceE
Confidence 34899999986 67888887665443 34999999999999999999999998 999999999999995 78999
Q ss_pred EeeCCCccccccccc------------cccccCCCCCchhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHH
Q 005415 564 IIDLGSSCFQTDNLC------------LYVQSRSYRAPEVII---GLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (697)
Q Consensus 564 L~DFGla~~~~~~~~------------~~~gt~~Y~APE~l~---~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~ 628 (697)
|.|||++........ ....|..|+|||.+. +...+.++|||||||+||.|+.|.-||..
T Consensus 170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~------ 243 (302)
T KOG2345|consen 170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER------ 243 (302)
T ss_pred EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH------
Confidence 999999866432211 123478899999985 44578899999999999999999999952
Q ss_pred HHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 629 l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
+.+..|......... .--|-......+.+.+..+..+..-|.+|+++.++.
T Consensus 244 ---~~~~GgSlaLAv~n~----q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll 294 (302)
T KOG2345|consen 244 ---IYQQGGSLALAVQNA----QISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELL 294 (302)
T ss_pred ---HhhcCCeEEEeeecc----ccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHH
Confidence 222222222211110 001112222345556666666667788899888776
No 347
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=2.4e-29 Score=266.71 Aligned_cols=244 Identities=20% Similarity=0.245 Sum_probs=184.8
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCc----EEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~----~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
.++|++.+.||+|+||.||+|.+..++. .||+|.+.... .....+.+|+.+++.+. ||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~------h~niv~~~~~~~ 79 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD------HPHLVRLLGVCL 79 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCcccEEEEEc
Confidence 3578999999999999999999877776 57888887542 22235567777777654 889999999987
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
.. ..++++||+. ++|.+++..... .+++..+..++.|++.||.|||+++|+|+||||+||+++. ++.+||+
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~--~~~~kL~ 151 (303)
T cd05110 80 SP-TIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS--PNHVKIT 151 (303)
T ss_pred CC-CceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC--CCceEEc
Confidence 54 4678999997 567776654321 2788899999999999999999999999999999999984 6789999
Q ss_pred eCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 566 DLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 566 DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|||++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.+....+....+ .....+
T Consensus 152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~ 230 (303)
T cd05110 152 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERL 230 (303)
T ss_pred cccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCC
Confidence 999987643221 11234668999999998889999999999999999998 99999877655443333 222222
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
+.. -....++..++..||... |..|++++++.
T Consensus 231 ~~~-----------~~~~~~~~~li~~c~~~~----p~~Rp~~~~l~ 262 (303)
T cd05110 231 PQP-----------PICTIDVYMVMVKCWMID----ADSRPKFKELA 262 (303)
T ss_pred CCC-----------CCCCHHHHHHHHHHcCCC----hhhCcCHHHHH
Confidence 110 112346778888888865 66777777765
No 348
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1e-31 Score=269.90 Aligned_cols=254 Identities=28% Similarity=0.453 Sum_probs=204.7
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec-----CeE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL-----EHL 491 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~-----~~l 491 (697)
+.||.|+||.||.+.|..+|+.||+|.+.+- -....+..+|+++|...+ |.|++..++..+.. ..+
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFk------HdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFR------HDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhc------cccHHHHHHhcCCCCchHHHHH
Confidence 4699999999999999999999999998742 223467788999998876 56888888777643 347
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
|+++|+|..+|...+-..+ .++...+..+++||+.||.|||+.+|.||||||.|+|+++ ++.+||+|||+++
T Consensus 133 YV~TELmQSDLHKIIVSPQ------~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS--NCvLKICDFGLAR 204 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSPQ------ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS--NCILKICDFGLAR 204 (449)
T ss_pred HHHHHHHHhhhhheeccCC------CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc--CceEEeccccccc
Confidence 8899998887776665333 3888899999999999999999999999999999999996 9999999999997
Q ss_pred ccccc----cccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhh
Q 005415 572 FQTDN----LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQ 646 (697)
Q Consensus 572 ~~~~~----~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~ 646 (697)
..... .+..+-|.+|+|||++.|.. |+.++||||+|||+.|++..+..|+..++.+++..|++.+|.|..|.+..
T Consensus 205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence 65432 33356688999999999875 99999999999999999999999999999999999999999999987652
Q ss_pred c-c--------------cccccccC--CchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 647 G-Q--------------EIYKYFTK--EYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 647 ~-~--------------~~~~~~~~--~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
. + .....+.- ...--+....|..+++.-.+.+|.+.+++.+
T Consensus 285 ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~ 342 (449)
T KOG0664|consen 285 ACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQ 342 (449)
T ss_pred HhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence 1 1 11111111 1122344567888888888888888888874
No 349
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=1.5e-29 Score=261.83 Aligned_cols=245 Identities=22% Similarity=0.305 Sum_probs=185.6
Q ss_pred EeccCCCCceEEEEECCCC------cEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 421 YLGSAAFSKVFQAQDLHTG------VDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~~g------~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.||+|+||.||+|.+.... +.+|+|.+.... .....+.+|+.+++.++ ||||+++++++......+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~ 75 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFN------HPNIVKLLGVCLLNEPQY 75 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcC------CCCeeeEeeeecCCCCeE
Confidence 6899999999999876443 789999886543 33456777888887764 889999999999999999
Q ss_pred EEEEccc-cchHHHHHhhhccC-CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC---cceEEEeeC
Q 005415 493 IVCELLR-ANLYEFQKFNQESG-GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ---RCEIKIIDL 567 (697)
Q Consensus 493 LVmEyl~-gsL~~~l~~~~~~~-~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~---~~~vKL~DF 567 (697)
+||||+. ++|.+++....... ....+++..+..++.|++.||.|||+++++|+||||+||+++... ...++|+||
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999997 57777775432211 223478899999999999999999999999999999999998522 127999999
Q ss_pred CCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCH
Q 005415 568 GSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDL 641 (697)
Q Consensus 568 Gla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~ 641 (697)
|++....... .....+..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+....+..... +.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~- 233 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR-LQ- 233 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCc-cC-
Confidence 9986543211 12234678999999998889999999999999999998 9999988777666655532111 10
Q ss_pred HHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 642 EMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 642 e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
........+..++..||.. .|..|++++++..
T Consensus 234 ----------~~~~~~~~~~~li~~~l~~----~p~~Rp~~~~i~~ 265 (269)
T cd05044 234 ----------KPENCPDKIYQLMTNCWAQ----DPSERPTFDRIQE 265 (269)
T ss_pred ----------CcccchHHHHHHHHHHcCC----CcccCCCHHHHHH
Confidence 0111234566777777764 4888999988763
No 350
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.5e-30 Score=256.18 Aligned_cols=277 Identities=24% Similarity=0.390 Sum_probs=210.8
Q ss_pred CCcCCCCCcceeeCceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCC
Q 005415 396 TGFEENKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADE 475 (697)
Q Consensus 396 ~~~~~~~~~pv~~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~h 475 (697)
..+.....+.+..|. ..+|+|++++|+|.++.||.|....+.++++||++++-+. ..+.+|++||+.|. +|
T Consensus 22 ~eYWdYE~~~i~wg~--~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk--kKIkREikIL~nL~-----gg 92 (338)
T KOG0668|consen 22 REYWDYESLVIDWGN--QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK--KKIKREIKILQNLR-----GG 92 (338)
T ss_pred hhhcchhheeeeccc--cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH--HHHHHHHHHHHhcc-----CC
Confidence 344444455555553 4789999999999999999999999999999999987654 67889999999986 57
Q ss_pred CceeEEEEEEEec--CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccc
Q 005415 476 HHILRLYDYFYHL--EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENIL 553 (697)
Q Consensus 476 pnIv~l~~~f~~~--~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NIL 553 (697)
|||+++++...+. ....+|+||+...-. ....+. ++...++.++.|+++||.|+|+.||+|||+||.|+|
T Consensus 93 ~NIi~L~DiV~Dp~SktpaLiFE~v~n~Df--k~ly~t------l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvm 164 (338)
T KOG0668|consen 93 PNIIKLLDIVKDPESKTPSLIFEYVNNTDF--KQLYPT------LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVM 164 (338)
T ss_pred CCeeehhhhhcCccccCchhHhhhhccccH--HHHhhh------hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceee
Confidence 9999999999876 457899999975422 222222 777889999999999999999999999999999999
Q ss_pred ccccCcceEEEeeCCCccccccc--cccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCC-CCCcHHHHH
Q 005415 554 IKSYQRCEIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLF-PNDAVVMIL 629 (697)
Q Consensus 554 l~~~~~~~vKL~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF-~~~~~~e~l 629 (697)
|+. ..-.++|+|+|+|.+.... ....+.+..|.-||.+...+ |+...|+|||||+|..|+..+.|| .|.+..+++
T Consensus 165 Idh-~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQL 243 (338)
T KOG0668|consen 165 IDH-ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 243 (338)
T ss_pred ech-hhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHH
Confidence 997 5668999999999876544 34456788999999997654 899999999999999999977776 788889999
Q ss_pred HHHHHhhCCCCHHHHhh--------------cccccccc----cCC-chhh-hhHHHHHHHHHHHhhhhccCHHHHH--H
Q 005415 630 ARIIGMLGPIDLEMLMQ--------------GQEIYKYF----TKE-YDLY-YINEVCFANIFISLVVIRLTLEYAA--L 687 (697)
Q Consensus 630 ~~I~~~lg~~p~e~~~~--------------~~~~~~~~----~~~-~~l~-~i~~~cw~~l~~~~~~~r~t~e~~~--~ 687 (697)
.+|.+.+|.-...-.-+ ++..++.| ... ..+. +-..+...+++.---.+|+|+.++| |
T Consensus 244 VkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp 323 (338)
T KOG0668|consen 244 VKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP 323 (338)
T ss_pred HHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence 99999988654422111 11111111 111 1222 2234444555555566799999999 7
Q ss_pred hhc
Q 005415 688 WLF 690 (697)
Q Consensus 688 wl~ 690 (697)
|..
T Consensus 324 yF~ 326 (338)
T KOG0668|consen 324 YFA 326 (338)
T ss_pred hHH
Confidence 654
No 351
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=4.2e-29 Score=262.28 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=187.2
Q ss_pred ceEEEEEeccCCCCceEEEEEC---CCCcEEEEEEEecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~---~~g~~VAVKii~~~~-----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
.|++.+.||.|+||.||+|.+. .+|+.||+|+++... .......+|+.+++.+. +|+||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~~i~~~~~~~~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-----QSPFLVTLHYAFQ 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc-----cCCChhceeeEee
Confidence 4889999999999999999874 478999999997532 22355677888888875 3789999999999
Q ss_pred ecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 487 ~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
.....++||||+.+ +|.+.+.... .+++..+..++.|++.||.|||+.|++||||+|+|||++. ++.++|+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~ 147 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLT 147 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC--CCCEEEe
Confidence 99999999999984 6666665332 2788899999999999999999999999999999999985 7899999
Q ss_pred eCCCccccccc----cccccccCCCCCchhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 566 DLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 566 DFGla~~~~~~----~~~~~gt~~Y~APE~l~~~--~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|||++...... .....++..|+|||.+.+. .++.++||||||+++|+|++|..||...........+.......
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~ 227 (290)
T cd05613 148 DFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS 227 (290)
T ss_pred eCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc
Confidence 99998654332 1234578899999998753 46789999999999999999999997543322222222211100
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhcc-----CHHHHH--HhhcccC
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRL-----TLEYAA--LWLFGID 693 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~-----t~e~~~--~wl~~~~ 693 (697)
... ... .....+..+++.||... |..|. +.++++ +|+....
T Consensus 228 ~~~-------~~~--~~~~~~~~ll~~~l~~~----p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 228 EPP-------YPQ--EMSALAKDIIQRLLMKD----PKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred CCC-------CCc--cCCHHHHHHHHHHhcCC----HHHhcCCCCCCHHHHHcCcccccCC
Confidence 000 000 11234455555555544 66665 677777 7876554
No 352
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=8.2e-29 Score=252.29 Aligned_cols=246 Identities=28% Similarity=0.338 Sum_probs=194.8
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec--C
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL--E 489 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~--~ 489 (697)
+|++.+.||+|++|.||+|.+..+++.|++|++.... .....+.+|+.+++.++ ||||+++++.+... .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ------HPNIVRYYGSERDEEKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcC------CCCEeeEEEEEecCCCC
Confidence 5888999999999999999999899999999987654 34567778888888875 78999999999988 8
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..++||||+. ++|.+++.... .+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~--~~~~~l~d~~ 146 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS--DGVVKLADFG 146 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEcccc
Confidence 9999999995 56777665432 2889999999999999999999999999999999999995 7899999999
Q ss_pred Ccccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHHhhCCCCHH
Q 005415 569 SSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIGMLGPIDLE 642 (697)
Q Consensus 569 la~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~-~~e~l~~I~~~lg~~p~e 642 (697)
.+....... ....++..|+|||.+.+...+.++||||||+++++|++|..||.... ....+..+... ...+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~-- 223 (260)
T cd06606 147 CAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSS-GEPP-- 223 (260)
T ss_pred cEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhcccc-CCCc--
Confidence 987655432 33567888999999988889999999999999999999999998765 22222222110 0000
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
..... ....+..++..||. ..+..|.++++++ +|+
T Consensus 224 ------~~~~~--~~~~l~~~i~~~l~----~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 224 ------EIPEH--LSEEAKDFLRKCLR----RDPKKRPTADELLQHPFL 260 (260)
T ss_pred ------CCCcc--cCHHHHHHHHHhCc----CChhhCCCHHHHhhCCCC
Confidence 01111 13455666666654 4588899999988 775
No 353
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=3.4e-29 Score=259.57 Aligned_cols=249 Identities=27% Similarity=0.379 Sum_probs=192.0
Q ss_pred ceEEEEEeccCCCCceEEEEECC-CCcEEEEEEEecch-----------hhhHhHHHHHHHHHHhcccCCCCCCceeEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKNDK-----------DFFDQSLDEIKLLKLVNKNDPADEHHILRLY 482 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~-~g~~VAVKii~~~~-----------~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~ 482 (697)
.|++.+.||+|+||.||++.+.. +++.+|+|.+.... .....+..|+.++... .+||||++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~h~~i~~~~ 75 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ-----LRHPNIVRYY 75 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc-----CCCCCeeeEE
Confidence 37889999999999999999877 68899999876321 1223344555555432 3589999999
Q ss_pred EEEEecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcc
Q 005415 483 DYFYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRC 560 (697)
Q Consensus 483 ~~f~~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~ 560 (697)
+++......++||||+.+ +|.+++...... ...+++..++.++.|++.||.|||+ .+|+|+||+|+||+++. ++
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~--~~ 151 (269)
T cd08528 76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE--DD 151 (269)
T ss_pred eeEccCCeEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC--CC
Confidence 999999999999999975 666665432221 1238889999999999999999996 78999999999999985 78
Q ss_pred eEEEeeCCCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCC
Q 005415 561 EIKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 561 ~vKL~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
.++|+|||.+...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...........+......
T Consensus 152 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 231 (269)
T cd08528 152 KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE 231 (269)
T ss_pred cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC
Confidence 8999999998765433 23356788899999999888999999999999999999999999887776666666543332
Q ss_pred CCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 639 IDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 639 ~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
+..+ -.....+..++..||... |..|+++.++.+
T Consensus 232 ~~~~-----------~~~~~~l~~li~~cl~~~----p~~Rp~~~e~~~ 265 (269)
T cd08528 232 PLPE-----------GMYSEDVTDVITSCLTPD----AEARPDIIQVSA 265 (269)
T ss_pred cCCc-----------ccCCHHHHHHHHHHCCCC----CccCCCHHHHHH
Confidence 2211 012346777778777654 778888888764
No 354
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=2.7e-29 Score=269.50 Aligned_cols=203 Identities=21% Similarity=0.288 Sum_probs=159.6
Q ss_pred EEeccC--CCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEE
Q 005415 420 EYLGSA--AFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIV 494 (697)
Q Consensus 420 e~LG~G--~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LV 494 (697)
..||.| +||+||+|.+..+++.||+|++.... ...+.+.+|+.+++.+ +||||++++++|..+...++|
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l------~h~niv~~~~~~~~~~~~~~v 77 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF------RHPNIMTSWTVFTTGSWLWVI 77 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCcceEeeeEecCCceEEE
Confidence 356666 99999999999999999999987532 2235566777776655 488999999999999999999
Q ss_pred EEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccc
Q 005415 495 CELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQ 573 (697)
Q Consensus 495 mEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~ 573 (697)
|||+.+ ++.+++...... .+++..++.++.||+.||.|||++||+||||||+|||+.. ++.++++||+.+...
T Consensus 78 ~e~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~--~~~~~~~~~~~~~~~ 151 (328)
T cd08226 78 SPFMAYGSANSLLKTYFPE----GMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISG--DGLVSLSGLSHLYSL 151 (328)
T ss_pred EecccCCCHHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC--CCcEEEechHHHhhh
Confidence 999985 666666543221 2788999999999999999999999999999999999985 788999999754322
Q ss_pred ccc----------cccccccCCCCCchhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Q 005415 574 TDN----------LCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 634 (697)
Q Consensus 574 ~~~----------~~~~~gt~~Y~APE~l~~~--~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~ 634 (697)
... .....++..|+|||++.+. .++.++|||||||++|+|++|..||.+......+..++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~ 224 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLK 224 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhc
Confidence 110 0112335669999999764 478999999999999999999999988766555544443
No 355
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=3.1e-29 Score=260.73 Aligned_cols=252 Identities=20% Similarity=0.245 Sum_probs=195.0
Q ss_pred CceEEEEEeccCCCCceEEEEECC-----CCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLH-----TGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~-----~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
.+|++++.||.|+||.||+|+.+. ..+.|++|.+..... ....+.+|+.+++.++ |+||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~ 78 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLS------HKNVVRLLGLCR 78 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcC------CcceeeeEEEEC
Confidence 579999999999999999999653 356799998875432 3467788999988875 789999999999
Q ss_pred ecCeEEEEEEccc-cchHHHHHhhhccC---CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 487 HLEHLFIVCELLR-ANLYEFQKFNQESG---GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 487 ~~~~l~LVmEyl~-gsL~~~l~~~~~~~---~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
.....++||||+. ++|.+++....... ....+++..+..++.||+.||.|||+++|+||||||+||+++. ++.+
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~--~~~~ 156 (275)
T cd05046 79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSS--QREV 156 (275)
T ss_pred CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeC--CCcE
Confidence 8899999999998 57777776443111 0123889999999999999999999999999999999999985 7889
Q ss_pred EEeeCCCccccccc----cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhC
Q 005415 563 KIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 563 KL~DFGla~~~~~~----~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg 637 (697)
+|+|||++...... .....++..|+|||.+.+..++.++||||||+++|+|++ |..||........+..+.....
T Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~ 236 (275)
T cd05046 157 KVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL 236 (275)
T ss_pred EEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc
Confidence 99999987643221 122345677999999988888999999999999999999 8999987776666665532211
Q ss_pred CCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHh
Q 005415 638 PIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALW 688 (697)
Q Consensus 638 ~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~w 688 (697)
..+. ....+..+..++..||... |..|+++++++.-
T Consensus 237 ~~~~-----------~~~~~~~l~~~i~~~l~~~----p~~Rp~~~~~l~~ 272 (275)
T cd05046 237 ELPV-----------PEGCPSRLYKLMTRCWAVN----PKDRPSFSELVSA 272 (275)
T ss_pred CCCC-----------CCCCCHHHHHHHHHHcCCC----cccCCCHHHHHHH
Confidence 1110 0122346677777777744 7888999887743
No 356
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=1.4e-29 Score=261.67 Aligned_cols=237 Identities=19% Similarity=0.267 Sum_probs=177.3
Q ss_pred EEeccCCCCceEEEEECCCCc-------EEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 420 EYLGSAAFSKVFQAQDLHTGV-------DVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~-------~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+.||+|+||.||+|.+...+. .||+|.+.... ...+.+.+|+.+++.+ .||||+++++++......
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~------~h~~iv~~~~~~~~~~~~ 74 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL------SHKHLVLNYGVCVCGDES 74 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC------CCCChhheeeEEEeCCCc
Confidence 369999999999998765443 48888876543 3335566777777765 488999999999998999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc------ceEEE
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR------CEIKI 564 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~------~~vKL 564 (697)
++||||+.+ +|..++..... .+++..+..++.||+.||.|||+++|+||||||+||+++.+.. +.++|
T Consensus 75 ~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 75 IMVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred EEEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEe
Confidence 999999985 56666653322 2788889999999999999999999999999999999985322 24799
Q ss_pred eeCCCccccccccccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHHHhC-CCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 565 IDLGSSCFQTDNLCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAELWTG-EVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 565 ~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~ELltG-~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
+|||.+..... .....++..|+|||++.+. .++.++|||||||++|+|++| .+||...+........ ......|.
T Consensus 150 ~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~~~- 226 (258)
T cd05078 150 SDPGISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-EDRHQLPA- 226 (258)
T ss_pred cccccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-HccccCCC-
Confidence 99998865433 2235678889999999864 578999999999999999998 5777665554433222 11111111
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
....++..++..||... |..|+|++++.
T Consensus 227 ------------~~~~~~~~li~~~l~~~----p~~Rps~~~il 254 (258)
T cd05078 227 ------------PKWTELANLINQCMDYE----PDFRPSFRAII 254 (258)
T ss_pred ------------CCcHHHHHHHHHHhccC----hhhCCCHHHHH
Confidence 11245777888888766 77888888876
No 357
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.9e-31 Score=265.69 Aligned_cols=261 Identities=24% Similarity=0.390 Sum_probs=211.3
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe--
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH-- 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~---~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~-- 487 (697)
.+.|.-+.+||+|.||.||+|+.+.+++.||+|++-. ...+....++|+++|+.|. |+|++.++..|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lk------Henv~nliEic~tk~ 89 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLK------HENVVNLIEICRTKA 89 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhc------chhHHHHHHHHhhcc
Confidence 4678888999999999999999999999999997643 3345567889999999987 5677777666542
Q ss_pred ------cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcce
Q 005415 488 ------LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 561 (697)
Q Consensus 488 ------~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~ 561 (697)
...+|+||.+|+.+|.-++.... ..+++.++..++.+++.||.|+|...|+|||+|+.|+||+. ++.
T Consensus 90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~--dgi 162 (376)
T KOG0669|consen 90 TPTNRDRATFYLVFDFCEHDLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITK--DGI 162 (376)
T ss_pred CCcccccceeeeeHHHhhhhHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcC--Cce
Confidence 23489999999998887765332 23999999999999999999999999999999999999994 899
Q ss_pred EEEeeCCCcccccc-------ccccccccCCCCCchhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Q 005415 562 IKIIDLGSSCFQTD-------NLCLYVQSRSYRAPEVIIGLP-YDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 633 (697)
Q Consensus 562 vKL~DFGla~~~~~-------~~~~~~gt~~Y~APE~l~~~~-~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~ 633 (697)
+||+|||+++.... ..+..+-|.+|++||.++|.. |+++.|||..|||+.||+||.+.|++++...++..|.
T Consensus 163 lklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is 242 (376)
T KOG0669|consen 163 LKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLIS 242 (376)
T ss_pred EEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHH
Confidence 99999999965332 233356699999999999864 9999999999999999999999999999999999999
Q ss_pred HhhCCCCHHHHhhcccccccccC------------------CchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 634 GMLGPIDLEMLMQGQEIYKYFTK------------------EYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 634 ~~lg~~p~e~~~~~~~~~~~~~~------------------~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
..+|.+.++.|++..+..-+-.- .+-...-..+...+++.-.|..|.+..+++
T Consensus 243 ~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred HHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 99999999988875543322111 011112334566777777788999999988
No 358
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.1e-30 Score=283.83 Aligned_cols=246 Identities=24% Similarity=0.319 Sum_probs=201.8
Q ss_pred ecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+...|.+...+|.|+|+.|-.+.+..+++..++|++.... .+..+|+.++.... +||||+++.+.+.+..++
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~-----~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVR-----DHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhc-----CCCcceeecceecCCcee
Confidence 3467999999999999999999999999999999998662 34556777777765 489999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
|+|||.+.++..-....... .....+..|+.+|+.|+.|||++|||||||||+|||+. ++.+.++|+|||.++
T Consensus 392 ~~v~e~l~g~ell~ri~~~~------~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~-~~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKP------EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD-GSAGHLRLTYFGFWS 464 (612)
T ss_pred eeeehhccccHHHHHHHhcc------hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec-CCCCcEEEEEechhh
Confidence 99999998764433222222 22267778999999999999999999999999999995 258899999999998
Q ss_pred ccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccc
Q 005415 572 FQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIY 651 (697)
Q Consensus 572 ~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~ 651 (697)
.......+.+-|..|.|||++....|+.++||||||++||+||+|+.||...+.. ..|...++.++..
T Consensus 465 ~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~s--------- 532 (612)
T KOG0603|consen 465 ELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKFS--------- 532 (612)
T ss_pred hCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCccc---------
Confidence 8877755667788999999999999999999999999999999999999876655 2333333444332
Q ss_pred ccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 652 KYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 652 ~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
.......++...+++.--|..|+++.++. +|+.
T Consensus 533 ------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~ 567 (612)
T KOG0603|consen 533 ------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFL 567 (612)
T ss_pred ------cccCHHHHHHHHHhccCChhhCcChhhhccCcchh
Confidence 24556677788888888899999999999 9993
No 359
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=8.1e-29 Score=256.85 Aligned_cols=246 Identities=25% Similarity=0.333 Sum_probs=183.6
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 419 ~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
...||+|+||.||+|.+..++..||+|.+.... .....+.+|+.+++.++ |+||+++++++......++||||
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK------HRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcC------CCCeeeeeeeeccCCEEEEEEec
Confidence 357999999999999999999999999887543 33456778888888774 78999999999999999999999
Q ss_pred ccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+.+ +|..++...... ...+...+..++.||+.||.|||++||+||||||+||+++. ..+.++|+|||.+......
T Consensus 87 ~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~-~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 87 VPGGSLSALLRSKWGP---LKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred CCCCCHHHHHHHhccc---CCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC-CCCeEEEecchhheecccC
Confidence 974 666666532211 11277888899999999999999999999999999999974 3568999999988654321
Q ss_pred ---cccccccCCCCCchhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCcHH-HHHHHHHHhhCCCCHHHHhhcccc
Q 005415 577 ---LCLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVLFPNDAVV-MILARIIGMLGPIDLEMLMQGQEI 650 (697)
Q Consensus 577 ---~~~~~gt~~Y~APE~l~~~~--~s~ksDIWSLGviL~ELltG~~PF~~~~~~-e~l~~I~~~lg~~p~e~~~~~~~~ 650 (697)
.....+++.|+|||.+.+.. ++.++|+||||+++|+|++|..||...... .....+ ...... ...
T Consensus 163 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~--------~~~ 233 (268)
T cd06624 163 NPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV-GMFKIH--------PEI 233 (268)
T ss_pred CCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh-hhhccC--------CCC
Confidence 22345788999999987643 788999999999999999999999754322 111111 111100 001
Q ss_pred cccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 651 YKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 651 ~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
.. .....+..++..||. ..|..|.+++++. +|+
T Consensus 234 ~~--~~~~~~~~li~~~l~----~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 234 PE--SLSAEAKNFILRCFE----PDPDKRASAHDLLQDPFL 268 (268)
T ss_pred Cc--ccCHHHHHHHHHHcC----CCchhCCCHHHHHhCCCC
Confidence 11 112356666777765 4588899999988 885
No 360
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=5.2e-29 Score=263.31 Aligned_cols=243 Identities=22% Similarity=0.312 Sum_probs=190.0
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 419 ~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
..+||+|+||.||++.+..+++.||||.+.... .....+.+|+.+++.++ |+||+++++.+...+..++||||
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcC------CcchhheeeEEEeCCEEEEEEec
Confidence 457999999999999999999999999986432 23456777888887764 78999999999999999999999
Q ss_pred cccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 LRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
++++ |.+++. .. .+++..+..++.|++.||.|||+.|++|+||+|+||+++. ++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~-~~------~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~--~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 99 LEGGALTDIVT-HT------RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred CCCCcHHHHHh-cC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEcccccceecccc
Confidence 9864 444432 21 2788899999999999999999999999999999999985 678999999987654332
Q ss_pred ---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccccc
Q 005415 577 ---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 653 (697)
Q Consensus 577 ---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~ 653 (697)
.....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.+....+.+..+...+.+.. ...
T Consensus 170 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------~~~ 239 (292)
T cd06657 170 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKL----------KNL 239 (292)
T ss_pred cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCccc----------CCc
Confidence 2234678899999999888899999999999999999999999988777666555433221110 011
Q ss_pred ccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 654 FTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 654 ~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
-.....+..++..||.. .|..|.++++++ +|+.
T Consensus 240 ~~~~~~l~~li~~~l~~----~P~~R~~~~~ll~~~~~~ 274 (292)
T cd06657 240 HKVSPSLKGFLDRLLVR----DPAQRATAAELLKHPFLA 274 (292)
T ss_pred ccCCHHHHHHHHHHHhC----CcccCcCHHHHhcChHHh
Confidence 11233455666666654 588999999999 8876
No 361
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=2.8e-29 Score=256.41 Aligned_cols=237 Identities=29% Similarity=0.396 Sum_probs=190.6
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 422 LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
||.|+||.||++.+..+++.+|+|++..... ....+..|+.+++.++ |+||+++++.+......++||||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~~v~e~ 74 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN------HPFIVKLHYAFQTEEKLYLVLEY 74 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC------CCcHHHHHHHeecCCeeEEEEec
Confidence 6999999999999988899999999875432 3456778888888775 78999999999999999999999
Q ss_pred c-ccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc
Q 005415 498 L-RANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN 576 (697)
Q Consensus 498 l-~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~ 576 (697)
+ .++|.+++.... .+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||.+......
T Consensus 75 ~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 75 APGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA--DGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC--CCcEEEeecCcceecccC
Confidence 9 567777776443 2789999999999999999999999999999999999985 778999999998765432
Q ss_pred ---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccccccc
Q 005415 577 ---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEIYKY 653 (697)
Q Consensus 577 ---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~ 653 (697)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+.+...+.+.
T Consensus 147 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------ 214 (250)
T cd05123 147 GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE------------ 214 (250)
T ss_pred CCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC------------
Confidence 33456788899999999888899999999999999999999999888776666665441111111
Q ss_pred ccCCchhhhhHHHHHHHHHHHhhhhccCH---HHHH--Hhh
Q 005415 654 FTKEYDLYYINEVCFANIFISLVVIRLTL---EYAA--LWL 689 (697)
Q Consensus 654 ~~~~~~l~~i~~~cw~~l~~~~~~~r~t~---e~~~--~wl 689 (697)
.....+..++..||.. .|..|.+. ++++ +|+
T Consensus 215 -~~~~~l~~~i~~~l~~----~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 215 -FLSPEARDLISGLLQK----DPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred -CCCHHHHHHHHHHhcC----CHhhCCCcccHHHHHhCCCC
Confidence 1134566777777664 47778887 6666 664
No 362
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=1.1e-28 Score=289.80 Aligned_cols=144 Identities=27% Similarity=0.431 Sum_probs=124.0
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
++|+++++||+|+||.||+|.+..+++.||||+++... .....+..|+.+++.++ ||||+++++++....
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~------hp~Iv~~~~~~~~~~ 77 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK------SPFIVHLYYSLQSAN 77 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC------CCCcCeEEEEEEECC
Confidence 67999999999999999999999999999999997532 23356667777777654 789999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
++||||||+. ++|..++.... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~--~g~vkL~DFG 149 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN--EGHIKLTDFG 149 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC--CCCEEEEeCC
Confidence 9999999996 56777665332 2788899999999999999999999999999999999985 7889999999
Q ss_pred Ccc
Q 005415 569 SSC 571 (697)
Q Consensus 569 la~ 571 (697)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 864
No 363
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.96 E-value=4e-29 Score=257.69 Aligned_cols=240 Identities=20% Similarity=0.242 Sum_probs=178.7
Q ss_pred EEeccCCCCceEEEEECC---CCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE-ecCeEEE
Q 005415 420 EYLGSAAFSKVFQAQDLH---TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY-HLEHLFI 493 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~---~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~-~~~~l~L 493 (697)
+.||+|+||.||+|.+.. ....||+|.+... ......+.+|+.+++.+ +||||+++++++. .....++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~~~~~l 74 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF------SHPNVLSLLGICLPSEGSPLV 74 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC------CCCCcceEEEEeecCCCCcEE
Confidence 368999999999998643 3467999988542 23345666777777655 4899999999776 4556899
Q ss_pred EEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
||||+. ++|.+++..... ..++..+..++.|++.||.|||+.+++||||||+|||++. ++.+||+|||++..
T Consensus 75 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~--~~~~kl~dfg~~~~ 147 (262)
T cd05058 75 VLPYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE--SFTVKVADFGLARD 147 (262)
T ss_pred EEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCcccccc
Confidence 999997 567676653221 1567778889999999999999999999999999999985 77899999999865
Q ss_pred cccc-------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 573 QTDN-------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 573 ~~~~-------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
.... .....++..|+|||.+.+..++.++|||||||++|||++ |.+||...+..+....+......+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 224 (262)
T cd05058 148 IYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQP--- 224 (262)
T ss_pred ccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC---
Confidence 4321 112234667999999988889999999999999999999 67788877766655554322111110
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHh
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALW 688 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~w 688 (697)
. .....+..++..||... |..|+++.+++.-
T Consensus 225 -------~--~~~~~~~~li~~cl~~~----p~~Rp~~~~il~~ 255 (262)
T cd05058 225 -------E--YCPDPLYEVMLSCWHPK----PEMRPTFSELVSR 255 (262)
T ss_pred -------C--cCCHHHHHHHHHHcCCC----hhhCCCHHHHHHH
Confidence 0 12346778888888655 7778888887733
No 364
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=5.8e-29 Score=260.22 Aligned_cols=238 Identities=17% Similarity=0.185 Sum_probs=173.1
Q ss_pred EeccCCCCceEEEEECC------------------------CCcEEEEEEEecchh-hhHhHHHHHHHHHHhcccCCCCC
Q 005415 421 YLGSAAFSKVFQAQDLH------------------------TGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADE 475 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~------------------------~g~~VAVKii~~~~~-~~~~~~~Ei~iL~~L~~~~~~~h 475 (697)
+||+|+||.||+|.... ....|++|++..... ....+.+|+.+++.+ .|
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l------~h 75 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV------SH 75 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC------CC
Confidence 59999999999997422 124688998865432 223455666666555 48
Q ss_pred CceeEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccc
Q 005415 476 HHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIK 555 (697)
Q Consensus 476 pnIv~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~ 555 (697)
|||+++++++......++||||++++.+..+..... ..+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 76 ~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~ 151 (274)
T cd05076 76 IHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK----GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLA 151 (274)
T ss_pred CCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEe
Confidence 999999999999999999999998664443332211 1278889999999999999999999999999999999997
Q ss_pred ccC-----cceEEEeeCCCccccccccccccccCCCCCchhhcC-CCCCchhhHHHHHHHHHHHH-hCCCCCCCCcHHHH
Q 005415 556 SYQ-----RCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIG-LPYDQKIDLWSLGCILAELW-TGEVLFPNDAVVMI 628 (697)
Q Consensus 556 ~~~-----~~~vKL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~-~~~s~ksDIWSLGviL~ELl-tG~~PF~~~~~~e~ 628 (697)
... ...++|+|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|..||......+.
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred ccCcccCccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence 421 235899999987543322 22356788999998875 56899999999999999995 69999987665543
Q ss_pred HHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 629 LARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 629 l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
...+ ......|. .....+..++..||... |..|.+++++..
T Consensus 231 ~~~~-~~~~~~~~-------------~~~~~~~~li~~cl~~~----p~~Rps~~~il~ 271 (274)
T cd05076 231 ERFY-EKKHRLPE-------------PSCKELATLISQCLTYE----PTQRPSFRTILR 271 (274)
T ss_pred HHHH-HhccCCCC-------------CCChHHHHHHHHHcccC----hhhCcCHHHHHH
Confidence 3222 11111111 11235778888888754 777888887764
No 365
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=1.8e-29 Score=260.38 Aligned_cols=248 Identities=24% Similarity=0.325 Sum_probs=189.6
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc------hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~------~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
||.+.+.||+|+||.||++.+...+..+++|+++.. .....+...|+.+++.++ ||||+++++++...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 74 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD------HPAIVKFHASFLER 74 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC------CCcHHHHHHHHhcC
Confidence 699999999999999999999888777878877632 112234556777776654 88999999999999
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
...++||||+.+ +|..++...... ...+++..++.++.|++.||.|||+.|++|+||+|+||+++ .+.++|+||
T Consensus 75 ~~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~---~~~~~l~d~ 149 (260)
T cd08222 75 DAFCIITEYCEGRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK---NNLLKIGDF 149 (260)
T ss_pred CceEEEEEeCCCCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee---cCCEeeccc
Confidence 999999999985 555555432221 12388999999999999999999999999999999999997 456999999
Q ss_pred CCccccccc---cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHH
Q 005415 568 GSSCFQTDN---LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEML 644 (697)
Q Consensus 568 Gla~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~ 644 (697)
|.+...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...........+... .++. .
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~-~- 225 (260)
T cd08222 150 GVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG--PTPS-L- 225 (260)
T ss_pred CceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CCCC-C-
Confidence 988654332 22345788899999998888899999999999999999999999877666655554332 1111 0
Q ss_pred hhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 645 MQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 645 ~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
. ......+..++..||. ..|..|.+.++++ +|+
T Consensus 226 ------~--~~~~~~~~~li~~~l~----~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 226 ------P--ETYSRQLNSIMQSMLN----KDPSLRPSAAEILRNPFI 260 (260)
T ss_pred ------c--chhcHHHHHHHHHHhc----CChhhCcCHHHHhhCCCC
Confidence 0 0112355566666665 4588999999998 875
No 366
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=4.5e-29 Score=259.78 Aligned_cols=252 Identities=22% Similarity=0.303 Sum_probs=191.3
Q ss_pred CceEEEEEeccCCCCceEEEEEC----CCCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDL----HTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~----~~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
..|++.+.||+|+||.||+|... .++..||||+++.... ....+.+|+++++.+. |+||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~------~~~i~~~~~~~~~ 77 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD------HENIVKYKGVCEK 77 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCC------CCChheEEeeeec
Confidence 46888999999999999999854 3478999999986544 3567788888888764 7899999999887
Q ss_pred --cCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEE
Q 005415 488 --LEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKI 564 (697)
Q Consensus 488 --~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL 564 (697)
....++||||+. ++|.+++..... .+++..+..++.||+.||.|||++||+|+||||+||+++. ++.++|
T Consensus 78 ~~~~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l 150 (284)
T cd05038 78 PGGRSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVES--EDLVKI 150 (284)
T ss_pred CCCCceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEE
Confidence 567999999996 577777754332 2888999999999999999999999999999999999985 789999
Q ss_pred eeCCCccccccccc------cccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHH-----------
Q 005415 565 IDLGSSCFQTDNLC------LYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVM----------- 627 (697)
Q Consensus 565 ~DFGla~~~~~~~~------~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e----------- 627 (697)
+|||.+........ ...++..|+|||.+.+..++.++||||||+++|+|++|..||.......
T Consensus 151 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd05038 151 SDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQM 230 (284)
T ss_pred cccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccc
Confidence 99999876553211 1233556999999988889999999999999999999999986543211
Q ss_pred HHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 628 ILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 628 ~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
....+...+ ...............+..++..||..- |..|++++++..+|.
T Consensus 231 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rpt~~ei~~~l~ 281 (284)
T cd05038 231 IVTRLLELL--------KEGERLPRPPSCPDEVYDLMKLCWEAE----PQDRPSFADLILIVD 281 (284)
T ss_pred cHHHHHHHH--------HcCCcCCCCccCCHHHHHHHHHHhccC----hhhCCCHHHHHHHHh
Confidence 011111111 111111111223356777888888764 788999999886654
No 367
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.96 E-value=5.9e-29 Score=258.01 Aligned_cols=248 Identities=19% Similarity=0.238 Sum_probs=186.1
Q ss_pred eEEEEEeccCCCCceEEEEEC---CCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 416 YYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~---~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
|++.+.||+|+||.||+|.+. .+++.||||++... ....+++.+|+++++.++ ||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~ 74 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFD------HPNVIKLIGVSLRSR 74 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCC------CCCcceEEEEEccCC
Confidence 677889999999999999864 35789999998753 233456777888887764 789999999887542
Q ss_pred ------eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceE
Q 005415 490 ------HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEI 562 (697)
Q Consensus 490 ------~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~v 562 (697)
..++++||+. ++|..++...........++...++.++.|++.||+|||+++|+||||||+||+++. ++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~--~~~~ 152 (273)
T cd05074 75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNE--NMTV 152 (273)
T ss_pred CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcC--CCCE
Confidence 2478899987 455555543222112223788899999999999999999999999999999999985 7889
Q ss_pred EEeeCCCcccccccc-----ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhh
Q 005415 563 KIIDLGSSCFQTDNL-----CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGML 636 (697)
Q Consensus 563 KL~DFGla~~~~~~~-----~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~l 636 (697)
||+|||++....... ....+++.|++||.+.+..++.++|||||||++|+|++ |.+||.+.+..+....+....
T Consensus 153 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05074 153 CVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN 232 (273)
T ss_pred EECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999987653221 12234567999999998889999999999999999999 999998877766655554321
Q ss_pred CCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 637 GPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 637 g~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
. +. ........+..++..||... |..|.++.++..
T Consensus 233 ~-~~-----------~~~~~~~~~~~l~~~~l~~~----p~~Rps~~~~~~ 267 (273)
T cd05074 233 R-LK-----------QPPDCLEDVYELMCQCWSPE----PKCRPSFQHLRD 267 (273)
T ss_pred c-CC-----------CCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHH
Confidence 1 10 00122346777888888765 677778877763
No 368
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=5e-29 Score=258.79 Aligned_cols=239 Identities=18% Similarity=0.177 Sum_probs=174.1
Q ss_pred EEeccCCCCceEEEEECC------------CCcEEEEEEEecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 420 EYLGSAAFSKVFQAQDLH------------TGVDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~------------~g~~VAVKii~~~~~-~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
+.||.|+||.||+|.... ....|++|++..... ....+.+|+.+++.++ ||||+++++++.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~------hp~iv~~~~~~~ 74 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS------HKHIVLLYGVCV 74 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCC------CCCEeeEEEEEe
Confidence 368999999999997432 234689998765432 2335566677776664 899999999999
Q ss_pred ecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc-----ce
Q 005415 487 HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR-----CE 561 (697)
Q Consensus 487 ~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~-----~~ 561 (697)
.....++||||++++.+........ ..+++..+..++.||+.||.|||+++|+||||||+|||++.... ..
T Consensus 75 ~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 75 RDVENIMVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred cCCCCEEEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCce
Confidence 9889999999998655444332211 23888999999999999999999999999999999999975221 23
Q ss_pred EEEeeCCCccccccccccccccCCCCCchhhc-CCCCCchhhHHHHHHHHHHHH-hCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 562 IKIIDLGSSCFQTDNLCLYVQSRSYRAPEVII-GLPYDQKIDLWSLGCILAELW-TGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 562 vKL~DFGla~~~~~~~~~~~gt~~Y~APE~l~-~~~~s~ksDIWSLGviL~ELl-tG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
++++|||++...... ....++..|+|||.+. +..++.++|||||||++|+|+ +|..||......+... +......
T Consensus 151 ~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~~- 227 (262)
T cd05077 151 IKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQCM- 227 (262)
T ss_pred eEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCcc-
Confidence 899999988654332 2345778899999987 456899999999999999998 5999998765443322 1111000
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHH
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAAL 687 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~ 687 (697)
........+..++..||... |..|++.++++.
T Consensus 228 ------------~~~~~~~~~~~li~~cl~~d----p~~Rp~~~~il~ 259 (262)
T cd05077 228 ------------LVTPSCKELADLMTHCMNYD----PNQRPFFRAIMR 259 (262)
T ss_pred ------------CCCCChHHHHHHHHHHcCCC----hhhCcCHHHHHH
Confidence 00112346778888888754 778888877763
No 369
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=4.3e-29 Score=261.67 Aligned_cols=254 Identities=22% Similarity=0.257 Sum_probs=184.9
Q ss_pred ceEEEEEeccCCCCceEEEEE----CCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 415 RYYVTEYLGSAAFSKVFQAQD----LHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d----~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
-|++++.||+|+||.||++.. ..++..||+|.++.. ......+.+|+.+++.++ ||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY------HENIVKYKGICTED 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCC------CCCeeeeeeEEecC
Confidence 368999999999999999974 457889999998743 233456778888888774 78999999998875
Q ss_pred --CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 489 --EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 489 --~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
...++||||++ ++|.+++..... .+++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~--~~~~~l~ 151 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPRNKN-----KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES--EHQVKIG 151 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcC--CCCEEEC
Confidence 56899999996 566666643221 2788999999999999999999999999999999999985 7889999
Q ss_pred eCCCcccccccc------ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 566 DLGSSCFQTDNL------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 566 DFGla~~~~~~~------~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
|||++....... ....++..|+|||.+.+..++.++|||||||++|+|+++..|+.... ... .+..++.
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~--~~~---~~~~~~~ 226 (284)
T cd05079 152 DFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM--TLF---LKMIGPT 226 (284)
T ss_pred CCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc--chh---hhhcccc
Confidence 999987543321 12345667999999998889999999999999999999887653321 111 1111111
Q ss_pred CHH----H----HhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhc
Q 005415 640 DLE----M----LMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLF 690 (697)
Q Consensus 640 p~e----~----~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~ 690 (697)
..+ . ................+..++..||.. .|..|++++++...+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~----~p~~Rpt~~~il~~l~ 281 (284)
T cd05079 227 HGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEF----QPSKRTTFQNLIEGFE 281 (284)
T ss_pred cccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccC----CcccCcCHHHHHHHHH
Confidence 100 0 001111111112234566666766664 4888999998886554
No 370
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.96 E-value=1.1e-28 Score=256.70 Aligned_cols=247 Identities=17% Similarity=0.179 Sum_probs=181.1
Q ss_pred EeccCCCCceEEEEECCC--CcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEE
Q 005415 421 YLGSAAFSKVFQAQDLHT--GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCE 496 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~~--g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmE 496 (697)
.||+|+||.||++..... ...+++|.+.... .....+.+|+.+++.+ +||||+++++.+......++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~~iv~~~~~~~~~~~~~lv~e 75 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL------QHPNILQCLGQCVEAIPYLLVFE 75 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc------CCcchhheEEEecCCCccEEEEe
Confidence 589999999999975332 3456677766432 2345667777777655 48999999999999999999999
Q ss_pred ccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccc
Q 005415 497 LLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 497 yl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~ 575 (697)
|+. ++|.+++...... ...++...++.++.||+.||.|||+.+|+||||||+|||++. ++.++|+|||++.....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~--~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS--DLTVKVGDYGIGPSRYK 151 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC--CccEEecccccccccCc
Confidence 998 5777777543221 122667778899999999999999999999999999999985 78899999998754221
Q ss_pred -----ccccccccCCCCCchhhcC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 576 -----NLCLYVQSRSYRAPEVIIG-------LPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 576 -----~~~~~~gt~~Y~APE~l~~-------~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
......++..|+|||++.. ..++.++|||||||++|||++ |..||...+..+.+..+.........
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~- 230 (268)
T cd05086 152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLF- 230 (268)
T ss_pred chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccC-
Confidence 1223457788999999743 245788999999999999997 68899887777766665432211100
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhh
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWL 689 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl 689 (697)
+ ..... .-...+..++..||. .|..|.+++++..-|
T Consensus 231 ---~-~~~~~--~~~~~~~~l~~~c~~-----~P~~Rp~~~~i~~~l 266 (268)
T cd05086 231 ---K-PQLEL--PYSERWYEVLQFCWL-----SPEKRATAEEVHRLL 266 (268)
T ss_pred ---C-CccCC--CCcHHHHHHHHHHhh-----CcccCCCHHHHHHHh
Confidence 0 00111 123467788999993 389999999987554
No 371
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=6.4e-29 Score=260.63 Aligned_cols=252 Identities=27% Similarity=0.353 Sum_probs=189.5
Q ss_pred ceEEEEEeccCCCCceEEEEEC---CCCcEEEEEEEecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDL---HTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFY 486 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~---~~g~~VAVKii~~~~-----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~ 486 (697)
+|++.+.||.|++|.||++.+. .+++.||||+++... .....+..|+.+++.+. +||||+++++.+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~~~~i~~~~~~~~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-----RCPFLVTLHYAFQ 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc-----CCcchhhhheeee
Confidence 4889999999999999999864 467899999987532 22345667888888775 3789999999999
Q ss_pred ecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEe
Q 005415 487 HLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKII 565 (697)
Q Consensus 487 ~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~ 565 (697)
.....++||||+.+ +|...+.... .+++..+..++.|++.||.|||+.+++||||+|+||+++. ++.++|+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~--~~~~~l~ 147 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS--EGHVVLT 147 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEE
Confidence 99999999999975 5666554321 2788899999999999999999999999999999999985 7789999
Q ss_pred eCCCcccccccc----ccccccCCCCCchhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHh
Q 005415 566 DLGSSCFQTDNL----CLYVQSRSYRAPEVIIGLP--YDQKIDLWSLGCILAELWTGEVLFPNDAV----VMILARIIGM 635 (697)
Q Consensus 566 DFGla~~~~~~~----~~~~gt~~Y~APE~l~~~~--~s~ksDIWSLGviL~ELltG~~PF~~~~~----~e~l~~I~~~ 635 (697)
|||++....... ....++..|+|||.+.+.. .+.++|+||||+++|+|++|..||..... .+....+...
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd05583 148 DFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS 227 (288)
T ss_pred ECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc
Confidence 999886543221 1245788999999987654 78899999999999999999999965432 2222222221
Q ss_pred hCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCH---HHHH--HhhcccCCCC
Q 005415 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTL---EYAA--LWLFGIDQNK 696 (697)
Q Consensus 636 lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~---e~~~--~wl~~~~~n~ 696 (697)
..+.+ . .....+..++..||... +..|.|+ ++++ +|+..++++.
T Consensus 228 ~~~~~-----------~--~~~~~l~~li~~~l~~~----p~~R~t~~~~~~~l~~~~~~~~~~~~ 276 (288)
T cd05583 228 KPPFP-----------K--TMSAEARDFIQKLLEKD----PKKRLGANGADEIKNHPFFQGIDWDD 276 (288)
T ss_pred CCCCC-----------c--ccCHHHHHHHHHHhcCC----HhhccCcchHHHHhcCcccccCCHHH
Confidence 11111 1 12345667777777655 6666664 3344 9998888763
No 372
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=285.31 Aligned_cols=229 Identities=25% Similarity=0.353 Sum_probs=177.8
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEEec-chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEccc
Q 005415 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKN-DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR 499 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~~g~~VAVKii~~-~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEyl~ 499 (697)
+||+|.||+||.|+|..+...+|||-+.. +.....-..+||.+.+.|+ |.|||+++|.+...+++-|.||-++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~Lr------HkNIVrYLGs~senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLR------HKNIVRYLGSVSENGFFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHh------hHhHHHHhhccCCCCeEEEEeecCC
Confidence 59999999999999999999999999874 4445566778999988886 6799999999999999999999998
Q ss_pred cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc---cc
Q 005415 500 ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT---DN 576 (697)
Q Consensus 500 gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~---~~ 576 (697)
|+.+..+...... ...-.+..+..+.+||++||.|||++.|||||||-+||||+. -.|.+||+|||.++... .-
T Consensus 656 GGSLSsLLrskWG--PlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT-ySGvlKISDFGTsKRLAginP~ 732 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWG--PLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT-YSGVLKISDFGTSKRLAGINPC 732 (1226)
T ss_pred CCcHHHHHHhccC--CCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee-ccceEEecccccchhhccCCcc
Confidence 6544444333321 111267888889999999999999999999999999999986 46899999999987643 23
Q ss_pred cccccccCCCCCchhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHH--HHHhhCCCCHHHHhhccc-c
Q 005415 577 LCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPND-AVVMILAR--IIGMLGPIDLEMLMQGQE-I 650 (697)
Q Consensus 577 ~~~~~gt~~Y~APE~l~~~--~~s~ksDIWSLGviL~ELltG~~PF~~~-~~~e~l~~--I~~~lg~~p~e~~~~~~~-~ 650 (697)
..++.||..|||||++..+ +|+.++|||||||++.||.||++||..- ++...+.+ +.+.-.++|.++....+. +
T Consensus 733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Fi 812 (1226)
T KOG4279|consen 733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFI 812 (1226)
T ss_pred ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHH
Confidence 4458899999999999765 4899999999999999999999999653 33333333 223344566665554443 2
Q ss_pred cccccCCc
Q 005415 651 YKYFTKEY 658 (697)
Q Consensus 651 ~~~~~~~~ 658 (697)
.++|..++
T Consensus 813 lrcFepd~ 820 (1226)
T KOG4279|consen 813 LRCFEPDP 820 (1226)
T ss_pred HHHcCCCc
Confidence 34444443
No 373
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=1.1e-28 Score=252.63 Aligned_cols=246 Identities=26% Similarity=0.295 Sum_probs=191.7
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch---hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+|++.+.||.|++|.||++.+..+++.+|+|.+.... .....+.+|+.+++.++ |+||+++++++......
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~ 74 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN------HPNIISYKEAFLDGNKL 74 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC------CCCchhhhhhhccCCEE
Confidence 5899999999999999999999999999999987532 22345567777777664 78999999999999999
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||+++ +|..++...... ...+++..+..++.|++.||.|||+.|++|+||+|.||+++. ++.+||+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~--~~~~kl~d~g~~ 150 (256)
T cd08530 75 CIVMEYAPFGDLSKAISKRKKK--RKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA--NDLVKIGDLGIS 150 (256)
T ss_pred EEEehhcCCCCHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec--CCcEEEeeccch
Confidence 999999964 676666543221 123788999999999999999999999999999999999995 778999999998
Q ss_pred cccccc-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhccc
Q 005415 571 CFQTDN-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQE 649 (697)
Q Consensus 571 ~~~~~~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~ 649 (697)
...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.......+.....+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------- 223 (256)
T cd08530 151 KVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPP------- 223 (256)
T ss_pred hhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCch-------
Confidence 665443 222457889999999999889999999999999999999999998887766555543322111110
Q ss_pred ccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 650 IYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 650 ~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
.....+..++..||. ..+..|.++++++
T Consensus 224 -----~~~~~~~~li~~~l~----~~p~~Rp~~~~~l 251 (256)
T cd08530 224 -----IYSQDLQNFIRSMLQ----VKPKLRPNCDKIL 251 (256)
T ss_pred -----hhCHHHHHHHHHHcC----CCcccCCCHHHHh
Confidence 112345555555554 4478899988876
No 374
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=270.02 Aligned_cols=201 Identities=28% Similarity=0.386 Sum_probs=175.2
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
.+.|+.-++||+|+||.||-++-..+|+-+|+|.+.+. +......+.|..||+.++. +.||.+--.|++.
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s------~FiVslaYAfeTk 257 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS------PFIVSLAYAFETK 257 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc------CcEEEEeeeecCC
Confidence 35688889999999999999999999999999988643 2334566789999999874 5899999999999
Q ss_pred CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 489 ~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
+.+++||..|+|+.+.+..++... .-++++.++.++.+|+.||.+||+.+||.|||||+|||++. .|+++|+|+|
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g~---~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd--~GhvRISDLG 332 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHGN---PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDD--HGHVRISDLG 332 (591)
T ss_pred CceEEEEEeecCCceeEEeeccCC---CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeecc--CCCeEeeccc
Confidence 999999999998776666555432 34999999999999999999999999999999999999994 9999999999
Q ss_pred Cccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCc
Q 005415 569 SSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDA 624 (697)
Q Consensus 569 la~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~ 624 (697)
+|...... ....+||.+|||||++.+..|+...|.|||||+||||+.|+.||....
T Consensus 333 LAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K 390 (591)
T KOG0986|consen 333 LAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK 390 (591)
T ss_pred eEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh
Confidence 99876543 445699999999999999999999999999999999999999997543
No 375
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=260.64 Aligned_cols=208 Identities=27% Similarity=0.372 Sum_probs=171.7
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
..+++..||+|+.|+||++..+.+|..+|||.+.... ....+++..+.+....+ +.|+||+.+|+|......+
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~-----dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhcc-----CCCeeeeeeeEEeeCchHH
Confidence 4567888999999999999999999999999998643 23344445555444332 4689999999999999999
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhc-CccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~-gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
|.||.|..-+..+++..... +++..+-.+...+++||.||-++ +|+|||+||+|||++. .|.+||||||.+.
T Consensus 168 IcMelMs~C~ekLlkrik~p-----iPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe--~GniKlCDFGIsG 240 (391)
T KOG0983|consen 168 ICMELMSTCAEKLLKRIKGP-----IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE--RGNIKLCDFGISG 240 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCC-----chHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc--CCCEEeecccccc
Confidence 99999987666666554432 88888889999999999999965 8999999999999995 8999999999997
Q ss_pred ccccc--cccccccCCCCCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHH
Q 005415 572 FQTDN--LCLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIG 634 (697)
Q Consensus 572 ~~~~~--~~~~~gt~~Y~APE~l~~~---~~s~ksDIWSLGviL~ELltG~~PF~~~~-~~e~l~~I~~ 634 (697)
+..+. .+...|++.|||||.+.-. .|+.++||||||++++||.||+.||.+.+ +-+.+.+|..
T Consensus 241 rlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln 309 (391)
T KOG0983|consen 241 RLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN 309 (391)
T ss_pred eeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh
Confidence 76554 3456889999999998643 58999999999999999999999999854 5577777766
No 376
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-30 Score=278.96 Aligned_cols=210 Identities=26% Similarity=0.392 Sum_probs=183.7
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEec----chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN----DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~----~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.+++++..||-|+||.|=++........+|+|++++ +....++...|..|+..++ .|+||++|..|.+..
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~------s~fIvrLYrTfrd~k 493 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR------SDFIVRLYRTFRDSK 493 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC------chHHHHHHHHhccch
Confidence 467788899999999999998766555689999875 3345677888999998886 469999999999999
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
.+|++||-|= |.+...+.-... |.....+.++..+++|+.|||++|||.|||||+|+|++. +|-+||.|||
T Consensus 494 yvYmLmEaClGGElWTiLrdRg~------Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~--~Gy~KLVDFG 565 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDRGS------FDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDN--RGYLKLVDFG 565 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhcCC------cccchhhhhHHHHHHHHHHHHhcCceeccCChhheeecc--CCceEEeehh
Confidence 9999999974 567766653332 888899999999999999999999999999999999995 8899999999
Q ss_pred Ccccccccc--ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhC
Q 005415 569 SSCFQTDNL--CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLG 637 (697)
Q Consensus 569 la~~~~~~~--~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg 637 (697)
+|+...... -+++|||.|.|||++++++.+.++|.||||+++|||++|.+||.+.++...+..|++.+.
T Consensus 566 FAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid 636 (732)
T KOG0614|consen 566 FAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID 636 (732)
T ss_pred hHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh
Confidence 998876553 458999999999999999999999999999999999999999999999999999987654
No 377
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.96 E-value=9.4e-30 Score=277.97 Aligned_cols=235 Identities=24% Similarity=0.343 Sum_probs=195.3
Q ss_pred ceEEEEEeccCCCCceEEEEECC----CCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLH----TGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~----~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
..++.++||.|.||.||+|.... ..-.||||..+.+ ....+.++.|.-+++.+ +||||++++|++..
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf------dHphIikLIGv~~e- 462 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF------DHPHIIKLIGVCVE- 462 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC------CCcchhheeeeeec-
Confidence 34456789999999999997532 2346899999863 34567888898888876 48999999999976
Q ss_pred CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
...|||||++. |.|..+++.+... ++...+..++.||..||+|||+.++|||||..+|||+.+ ..-+||+||
T Consensus 463 ~P~WivmEL~~~GELr~yLq~nk~s-----L~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS--p~CVKLaDF 535 (974)
T KOG4257|consen 463 QPMWIVMELAPLGELREYLQQNKDS-----LPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS--PQCVKLADF 535 (974)
T ss_pred cceeEEEecccchhHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC--cceeeeccc
Confidence 68999999998 7899999877765 888999999999999999999999999999999999996 556899999
Q ss_pred CCccccccccccc----cccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 568 GSSCFQTDNLCLY----VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 568 Gla~~~~~~~~~~----~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
|+++...+..... .-+.-|||||.+.-..++.++|||.|||.+||++. |..||.+-...+++-.|
T Consensus 536 GLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i---------- 605 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI---------- 605 (974)
T ss_pred chhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe----------
Confidence 9999887654321 22556999999999999999999999999999998 99999998887777665
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHh
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISL 675 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~ 675 (697)
.++.+.+..-.+++.||.+|..||+=....+
T Consensus 606 --EnGeRlP~P~nCPp~LYslmskcWayeP~kR 636 (974)
T KOG4257|consen 606 --ENGERLPCPPNCPPALYSLMSKCWAYEPSKR 636 (974)
T ss_pred --cCCCCCCCCCCCChHHHHHHHHHhccCcccC
Confidence 3455555556788999999999998654333
No 378
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.96 E-value=3.1e-28 Score=258.62 Aligned_cols=191 Identities=24% Similarity=0.296 Sum_probs=154.4
Q ss_pred CCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcccc-c
Q 005415 426 AFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-N 501 (697)
Q Consensus 426 ~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEyl~g-s 501 (697)
+++.||++++..+++.||||+++.. ......+..|+.+++.++ |+||+++++++......+++|||+.+ +
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ------HPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcC------CcchhhhhheeecCCeEEEEEeccCCCC
Confidence 4566777777779999999998754 344567788888888774 78999999999999999999999985 5
Q ss_pred hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc-----
Q 005415 502 LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN----- 576 (697)
Q Consensus 502 L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~----- 576 (697)
+.+++...... .+++..+..++.|++.||.|||+++|+||||||+||+++. ++.++|+|||.+......
T Consensus 86 l~~~l~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~--~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 86 CEDLLKTHFPE----GLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG--DGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec--CCceEEecCccceeecccccccc
Confidence 65665533221 2788899999999999999999999999999999999985 788999999987543221
Q ss_pred -----cccccccCCCCCchhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHH
Q 005415 577 -----LCLYVQSRSYRAPEVIIGL--PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMI 628 (697)
Q Consensus 577 -----~~~~~gt~~Y~APE~l~~~--~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~ 628 (697)
.....++..|+|||++... .++.++|+|||||++|+|++|..||........
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~ 218 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM 218 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 1223456789999999763 588999999999999999999999987665443
No 379
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-29 Score=257.69 Aligned_cols=263 Identities=31% Similarity=0.509 Sum_probs=217.0
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
++..||.-+..+|.|+- .|..|.|.-.++.||+|.+... .....+..+|.+++..++ |+||++++.+|.-
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~------~~nii~l~n~ftP 86 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVN------HKNIISLLNVFTP 86 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhc------ccceeeeeeccCc
Confidence 45678999999999998 8999999999999999987542 223356678888888886 7799999999985
Q ss_pred c------CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcce
Q 005415 488 L------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 561 (697)
Q Consensus 488 ~------~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~ 561 (697)
. ...|+|||+|..+|.+.+... +.-.++..|+.|++.|++|||+.||+||||||+||++.. ++.
T Consensus 87 ~~~l~~~~e~y~v~e~m~~nl~~vi~~e--------lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~--~~~ 156 (369)
T KOG0665|consen 87 QKTLEEFQEVYLVMELMDANLCQVILME--------LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS--DCT 156 (369)
T ss_pred cccHHHHHhHHHHHHhhhhHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc--hhh
Confidence 5 357999999999999888732 566789999999999999999999999999999999995 899
Q ss_pred EEEeeCCCccccccc--cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCC
Q 005415 562 IKIIDLGSSCFQTDN--LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 562 vKL~DFGla~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~ 639 (697)
+||.|||+++..... .+.++.++.|+|||++.+..+...+||||+|||+.||++|...|+|.+..++..+|++.+|.|
T Consensus 157 lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtp 236 (369)
T KOG0665|consen 157 LKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTP 236 (369)
T ss_pred eeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCC
Confidence 999999999765443 556788999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhhcccccccccC-------------------------CchhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 640 DLEMLMQGQEIYKYFTK-------------------------EYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~-------------------------~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
+++++.+-+..-+-+-. ...-....++...+++.-.|..|.+.+.++ |+++
T Consensus 237 d~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 237 DPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred CHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 99988753322111110 011223446666666777788899999999 6654
No 380
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.7e-29 Score=274.59 Aligned_cols=206 Identities=25% Similarity=0.372 Sum_probs=171.8
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
...|..++.||-|+||.|.++....+...+|+|.+++.. ........|..||.+.. .+.||+||-.|++.
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEAD------n~WVVrLyySFQDk 701 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEAD------NEWVVRLYYSFQDK 701 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcC------CcceEEEEEEeccC
Confidence 356889999999999999999988899999999998642 33455667888887765 45899999999999
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
+.+|+||+|++| ++-.++..... |.+..++.++.++..|+.+.|..|+|||||||+||||+. +|+|||+||
T Consensus 702 dnLYFVMdYIPGGDmMSLLIrmgI------FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDr--dGHIKLTDF 773 (1034)
T KOG0608|consen 702 DNLYFVMDYIPGGDMMSLLIRMGI------FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDF 773 (1034)
T ss_pred CceEEEEeccCCccHHHHHHHhcc------CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEcc--CCceeeeec
Confidence 999999999985 56666654433 888899999999999999999999999999999999996 999999999
Q ss_pred CCccccc---c------------------------------------------ccccccccCCCCCchhhcCCCCCchhh
Q 005415 568 GSSCFQT---D------------------------------------------NLCLYVQSRSYRAPEVIIGLPYDQKID 602 (697)
Q Consensus 568 Gla~~~~---~------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksD 602 (697)
|++.-.. + .....+||+.|+|||++...+|+..+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9873200 0 001247899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Q 005415 603 LWSLGCILAELWTGEVLFPNDAVVMILARI 632 (697)
Q Consensus 603 IWSLGviL~ELltG~~PF~~~~~~e~l~~I 632 (697)
.||.|||||||+.|++||..+.+.+.-.+|
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~tq~kv 883 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGETQYKV 883 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCcceeee
Confidence 999999999999999999877655443333
No 381
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=4.3e-29 Score=242.99 Aligned_cols=213 Identities=26% Similarity=0.393 Sum_probs=175.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
+...-+..||+|++|.|=+.++..+|...|+|.++..- ....+.++|+.+... ..+.|++|++|+.......+
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r-----~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMR-----TVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhcc-----CCCCCeEEEeehhhhccccE
Confidence 34455677999999999999999999999999987532 223344444444332 35689999999999999999
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhc-CccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL-GIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~-gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
+|.||.|..+|..+...--..++ .+++..+-+|+..++.||.|||++ .|+|||+||+||||+. .|++|+||||.+
T Consensus 121 wIcME~M~tSldkfy~~v~~~g~--~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~--~GqVKiCDFGIs 196 (282)
T KOG0984|consen 121 WICMELMDTSLDKFYRKVLKKGG--TIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY--DGQVKICDFGIS 196 (282)
T ss_pred EEeHHHhhhhHHHHHHHHHhcCC--cCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc--CCcEEEcccccc
Confidence 99999999998887765444333 388999999999999999999976 8999999999999995 899999999999
Q ss_pred ccccccccc--ccccCCCCCchhhc----CCCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHh
Q 005415 571 CFQTDNLCL--YVQSRSYRAPEVII----GLPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGM 635 (697)
Q Consensus 571 ~~~~~~~~~--~~gt~~Y~APE~l~----~~~~s~ksDIWSLGviL~ELltG~~PF~~-~~~~e~l~~I~~~ 635 (697)
....+.... ..|+..|+|||.+. ...|+.++||||||++++||.+++.||+. .++-+++.++++.
T Consensus 197 G~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 197 GYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred eeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 877665432 57888999999985 34699999999999999999999999976 5677888888663
No 382
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-30 Score=300.00 Aligned_cols=214 Identities=30% Similarity=0.425 Sum_probs=180.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEec---chhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKN---DKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~---~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.-||+-...||.|.||.||.|.+..+|+..|+|-++. .......+.+|++++..++ |||+|++|++-.+.+
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~ln------HpNlV~YyGVEvHRe 1307 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLN------HPNLVRYYGVEVHRE 1307 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhcc------CccccccCceeecHH
Confidence 4578888999999999999999999999999997763 3445677889999999886 889999999999999
Q ss_pred eEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..+|.||||.+ +|.+++...+. .++...+.+..|++.|+.|||+.|||||||||.||+++. +|.+|+.|||
T Consensus 1308 kv~IFMEyC~~GsLa~ll~~gri------~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~--~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHGRI------EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDF--NGLIKYGDFG 1379 (1509)
T ss_pred HHHHHHHHhccCcHHHHHHhcch------hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeec--CCcEEeeccc
Confidence 99999999985 55555543322 667778889999999999999999999999999999995 8899999999
Q ss_pred Ccccccccc-------ccccccCCCCCchhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCC
Q 005415 569 SSCFQTDNL-------CLYVQSRSYRAPEVIIGL---PYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGP 638 (697)
Q Consensus 569 la~~~~~~~-------~~~~gt~~Y~APE~l~~~---~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~ 638 (697)
.|.....+. ....||+.|||||++.+. +...+.|||||||++.||+||+.||..-+.+-++.-.+.+.-.
T Consensus 1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~ 1459 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHK 1459 (1509)
T ss_pred ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCC
Confidence 997765442 346899999999999754 4667899999999999999999999987777666666655544
Q ss_pred CC
Q 005415 639 ID 640 (697)
Q Consensus 639 ~p 640 (697)
|+
T Consensus 1460 Pq 1461 (1509)
T KOG4645|consen 1460 PQ 1461 (1509)
T ss_pred CC
Confidence 43
No 383
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-28 Score=262.41 Aligned_cols=255 Identities=22% Similarity=0.329 Sum_probs=197.2
Q ss_pred CCCcceeeCceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 005415 401 NKDLPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILR 480 (697)
Q Consensus 401 ~~~~pv~~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~ 480 (697)
+...|......+..+.++++.||+|.||.||+|.+ -|+.||||++....+ ..+.+|.+|++.+- .+|+||+.
T Consensus 198 GSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE--~SWfrEtEIYqTvm----LRHENILg 269 (513)
T KOG2052|consen 198 GSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDE--RSWFRETEIYQTVM----LRHENILG 269 (513)
T ss_pred CCCchhHhHHhhhheeEEEEEecCccccceeeccc--cCCceEEEEecccch--hhhhhHHHHHHHHH----hccchhhh
Confidence 45677777888899999999999999999999987 489999999986544 46678888888764 35899999
Q ss_pred EEEEEEec----CeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-----c---CccccCC
Q 005415 481 LYDYFYHL----EHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-----L---GIIHCDL 547 (697)
Q Consensus 481 l~~~f~~~----~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-----~---gIvHrDL 547 (697)
+++.-... ..+|||++|.+ |+|.+++.... ++.....+++..++.||+|||- + .|.||||
T Consensus 270 FIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDl 342 (513)
T KOG2052|consen 270 FIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDL 342 (513)
T ss_pred hhhccccCCCceEEEEEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccc
Confidence 98876543 46999999998 88999997632 8888999999999999999994 2 3999999
Q ss_pred CCccccccccCcceEEEeeCCCcccccc-------ccccccccCCCCCchhhcCCC----C-C-chhhHHHHHHHHHHHH
Q 005415 548 KPENILIKSYQRCEIKIIDLGSSCFQTD-------NLCLYVQSRSYRAPEVIIGLP----Y-D-QKIDLWSLGCILAELW 614 (697)
Q Consensus 548 KP~NILl~~~~~~~vKL~DFGla~~~~~-------~~~~~~gt~~Y~APE~l~~~~----~-s-~ksDIWSLGviL~ELl 614 (697)
|..|||+.. ++...|+|+|+|..... .....+||..|||||++...- + + ..+||||||.++||++
T Consensus 343 KSKNILVKk--n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEia 420 (513)
T KOG2052|consen 343 KSKNILVKK--NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIA 420 (513)
T ss_pred ccccEEEcc--CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHH
Confidence 999999995 88999999999865432 345579999999999995431 1 2 3599999999999998
Q ss_pred hC----------CCCCCC----CcHHHHHHHHH--HhhCCCCHHHHhhcccccccccCCc---hhhhhHHHHHHHHHHHh
Q 005415 615 TG----------EVLFPN----DAVVMILARII--GMLGPIDLEMLMQGQEIYKYFTKEY---DLYYINEVCFANIFISL 675 (697)
Q Consensus 615 tG----------~~PF~~----~~~~e~l~~I~--~~lg~~p~e~~~~~~~~~~~~~~~~---~l~~i~~~cw~~l~~~~ 675 (697)
.+ ++||.+ ++..+.+.+++ +.++|.++. .|..++ .+-.+|++||..-
T Consensus 421 rRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipn----------rW~s~~~l~~m~klMkeCW~~N---- 486 (513)
T KOG2052|consen 421 RRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPN----------RWKSDPALRVMAKLMKECWYAN---- 486 (513)
T ss_pred HHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCc----------ccccCHHHHHHHHHHHHhhcCC----
Confidence 63 678854 33344555543 333443333 334443 4557899999976
Q ss_pred hhhccCHHHHH
Q 005415 676 VVIRLTLEYAA 686 (697)
Q Consensus 676 ~~~r~t~e~~~ 686 (697)
|..|+|+=++.
T Consensus 487 p~aRltALriK 497 (513)
T KOG2052|consen 487 PAARLTALRIK 497 (513)
T ss_pred chhhhHHHHHH
Confidence 66667665555
No 384
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-28 Score=253.26 Aligned_cols=219 Identities=22% Similarity=0.347 Sum_probs=181.2
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
-++|.++++||+|+|++|.+++.+.+.+.+|+|++++. .+..+-...|..+..... +||.+|-++.+|+.+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-----n~pflvglhscfqte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NNPFLVGLHSCFQTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-----CCCeEEehhhhhccc
Confidence 36799999999999999999999999999999999853 333445556666666553 589999999999999
Q ss_pred CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 489 ~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
..+++|.||++|+-+-+....++. ++++.++.+..+|..||.|||++||+.||||.+|||++. .|++||+|+|
T Consensus 324 srlffvieyv~ggdlmfhmqrqrk-----lpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda--eghikltdyg 396 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYG 396 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhhc-----CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc--CCceeecccc
Confidence 999999999997655444443333 899999999999999999999999999999999999996 8999999999
Q ss_pred Cccc---cccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC-------CCcHHHHHHHH-HHhhC
Q 005415 569 SSCF---QTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFP-------NDAVVMILARI-IGMLG 637 (697)
Q Consensus 569 la~~---~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~-------~~~~~e~l~~I-~~~lg 637 (697)
+++. .++..++++|||.|.|||++.+..|+..+|.|+|||+++||+.|+.||. ..+.++.+.++ ++..-
T Consensus 397 mcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi 476 (593)
T KOG0695|consen 397 MCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI 476 (593)
T ss_pred hhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc
Confidence 9865 3455677999999999999999999999999999999999999999993 23445555544 34444
Q ss_pred CCCHHH
Q 005415 638 PIDLEM 643 (697)
Q Consensus 638 ~~p~e~ 643 (697)
.+|..+
T Consensus 477 riprsl 482 (593)
T KOG0695|consen 477 RIPRSL 482 (593)
T ss_pred ccccee
Confidence 445443
No 385
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.95 E-value=3.9e-30 Score=258.21 Aligned_cols=217 Identities=26% Similarity=0.349 Sum_probs=175.1
Q ss_pred ceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe
Q 005415 410 TVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH 487 (697)
Q Consensus 410 ~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~ 487 (697)
++-....+-+..||.|+||+|++..++.+|+..|||.++... ....+++.|.....+-. +.||||++||....
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~-----~cp~IVkfyGa~F~ 134 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSS-----NCPNIVKFYGALFS 134 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhc-----CCcHHHHHhhhhhc
Confidence 344455666778999999999999999999999999998543 33455666666554433 47899999999999
Q ss_pred cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
+...||.||+|.-++..+.+.-.... ...+++..+-.|....+.||.||-. ..|+|||+||+|||++. .|.+||||
T Consensus 135 EGdcWiCMELMd~SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr--~G~vKLCD 211 (361)
T KOG1006|consen 135 EGDCWICMELMDISLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR--HGDVKLCD 211 (361)
T ss_pred CCceeeeHHHHhhhHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec--CCCEeeec
Confidence 99999999999988877765433221 1238888888999999999999986 58999999999999996 89999999
Q ss_pred CCCccccccc--cccccccCCCCCchhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHH
Q 005415 567 LGSSCFQTDN--LCLYVQSRSYRAPEVII--GLPYDQKIDLWSLGCILAELWTGEVLFPNDA-VVMILARIIG 634 (697)
Q Consensus 567 FGla~~~~~~--~~~~~gt~~Y~APE~l~--~~~~s~ksDIWSLGviL~ELltG~~PF~~~~-~~e~l~~I~~ 634 (697)
||.+...... .+.-.|+..|||||.+. +.+|+.++|+||||++|||+.||..||..-+ ..+++..++.
T Consensus 212 FGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~ 284 (361)
T KOG1006|consen 212 FGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI 284 (361)
T ss_pred ccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc
Confidence 9999776554 33457899999999995 4468999999999999999999999998754 4566666643
No 386
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=6.6e-29 Score=270.17 Aligned_cols=197 Identities=29% Similarity=0.520 Sum_probs=174.2
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhH---------HHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQS---------LDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~---------~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
.|..++.||.|+||.|++|.++.+...|+||.+.+.+-..+.. -.||.||..|+.+. |+||++++++|
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~s---H~NIlKlLdfF 638 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHS---HENILKLLDFF 638 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcC---ccchhhhhhee
Confidence 5999999999999999999999999999999998765443333 35999999998764 99999999999
Q ss_pred EecCeEEEEEEcccc--chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 486 YHLEHLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 486 ~~~~~l~LVmEyl~g--sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
++++..||+||..+. +|.+++.+.+. +++.++..|++|++.|+++||+.||||||||-+||.++. +|-+|
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp~------m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~--~g~~k 710 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKPR------MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDS--NGFVK 710 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccCc------cchHHHHHHHHHHHhccccccccCceecccccccEEEec--CCeEE
Confidence 999999999999874 57777776554 899999999999999999999999999999999999995 89999
Q ss_pred EeeCCCcccccc-ccccccccCCCCCchhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 005415 564 IIDLGSSCFQTD-NLCLYVQSRSYRAPEVIIGLPY-DQKIDLWSLGCILAELWTGEVLFPN 622 (697)
Q Consensus 564 L~DFGla~~~~~-~~~~~~gt~~Y~APE~l~~~~~-s~ksDIWSLGviL~ELltG~~PF~~ 622 (697)
|+|||.+.+... +...++||..|.|||++.|..| +..-|||+||++||.++..+-||.+
T Consensus 711 lidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 711 LIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred EeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999999877654 4566899999999999999886 4568999999999999999999864
No 387
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=1.1e-27 Score=244.92 Aligned_cols=180 Identities=24% Similarity=0.271 Sum_probs=150.3
Q ss_pred CCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcccc-chH
Q 005415 425 AAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NLY 503 (697)
Q Consensus 425 G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEyl~g-sL~ 503 (697)
|.+|.||+++++.+++.||+|.++..... ..|...+.. ..||||+++++++......++||||+.+ +|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~----~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY----SRERLTIIP------HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhh----hhHHHHHHh------cCCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence 88999999999999999999999765321 223222221 2389999999999999999999999985 676
Q ss_pred HHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccccccccccc
Q 005415 504 EFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQS 583 (697)
Q Consensus 504 ~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~~~~~gt 583 (697)
+.+.... .+++..+..++.|++.||.|||++||+||||||+||+++. ++.++|+|||.+...........++
T Consensus 74 ~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~ 145 (237)
T cd05576 74 SHISKFL------NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD--RGHIQLTYFSRWSEVEDSCDGEAVE 145 (237)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEecccchhccccccccCCcC
Confidence 7665332 2889999999999999999999999999999999999995 7789999999876655544445567
Q ss_pred CCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005415 584 RSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN 622 (697)
Q Consensus 584 ~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~ 622 (697)
..|+|||.+.+..++.++|+||+|+++|+|++|..||..
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 789999999888899999999999999999999988754
No 388
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2.4e-27 Score=275.20 Aligned_cols=257 Identities=23% Similarity=0.341 Sum_probs=202.2
Q ss_pred ceecCceEEEEEeccCCCCceEEEEEC----C---CCcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeE
Q 005415 410 TVIAGRYYVTEYLGSAAFSKVFQAQDL----H---TGVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILR 480 (697)
Q Consensus 410 ~~i~~rY~i~e~LG~G~fG~Vy~a~d~----~---~g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~ 480 (697)
++...+..+.+.||.|+||.|++|.-. . ....||||.++... .....+..|+++++.+.+ |+||+.
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~-----H~niv~ 366 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGK-----HPNIVN 366 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcC-----Ccchhh
Confidence 333455567779999999999999742 1 25679999988533 446788899999999864 899999
Q ss_pred EEEEEEecCeEEEEEEccc-cchHHHHHhhh---ccCCC-------cccCHHHHHHHHHHHHHHHHHHHhcCccccCCCC
Q 005415 481 LYDYFYHLEHLFIVCELLR-ANLYEFQKFNQ---ESGGE-------AYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (697)
Q Consensus 481 l~~~f~~~~~l~LVmEyl~-gsL~~~l~~~~---~~~~~-------~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP 549 (697)
+++++.....+++|+||+. |+|+.++...+ ..... ..++...+..++.||+.|++||++.++|||||..
T Consensus 367 llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAa 446 (609)
T KOG0200|consen 367 LLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAA 446 (609)
T ss_pred heeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhh
Confidence 9999999999999999997 78999888766 11111 1388899999999999999999999999999999
Q ss_pred ccccccccCcceEEEeeCCCccccccccccc-c-----ccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 005415 550 ENILIKSYQRCEIKIIDLGSSCFQTDNLCLY-V-----QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPN 622 (697)
Q Consensus 550 ~NILl~~~~~~~vKL~DFGla~~~~~~~~~~-~-----gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~ 622 (697)
+|||+.. +..+||+|||+++......... . -+..|||||.+....|+.++||||+|++||||+| |..||++
T Consensus 447 RNVLi~~--~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 447 RNVLITK--NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred hhEEecC--CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 9999995 6789999999998644332221 1 2445999999999999999999999999999999 9999998
Q ss_pred Cc-HHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHH
Q 005415 623 DA-VVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYA 685 (697)
Q Consensus 623 ~~-~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~ 685 (697)
-. ..+.+.. +..+.+..+...+..++|.+|+.||......+|.-....+..
T Consensus 525 ~~~~~~l~~~------------l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~ 576 (609)
T KOG0200|consen 525 IPPTEELLEF------------LKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFF 576 (609)
T ss_pred CCcHHHHHHH------------HhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHH
Confidence 54 4444333 345666677777888999999999977655554443333333
No 389
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=5.6e-28 Score=281.24 Aligned_cols=250 Identities=27% Similarity=0.344 Sum_probs=182.3
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc--hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe---
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND--KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH--- 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~--~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~--- 487 (697)
..+|+.++.||+||||.||+++++-+|+.||||.+... ......+.+|+++|..|+ |||||++|..|..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLn------HpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLN------HPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcC------CcceeeeehhhhccCC
Confidence 35678889999999999999999999999999998765 445567888999998886 7899998855400
Q ss_pred --------------------------------------------------------------------------------
Q 005415 488 -------------------------------------------------------------------------------- 487 (697)
Q Consensus 488 -------------------------------------------------------------------------------- 487 (697)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred ----------------------------c--------CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHH
Q 005415 488 ----------------------------L--------EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCL 531 (697)
Q Consensus 488 ----------------------------~--------~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa 531 (697)
. ..+||-||||+..++..+....... -.....+++++||+
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreIl 707 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREIL 707 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHHH
Confidence 0 1368899999977666554433321 13567899999999
Q ss_pred HHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc---------------------cccccccccCCCCCch
Q 005415 532 EALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT---------------------DNLCLYVQSRSYRAPE 590 (697)
Q Consensus 532 ~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~---------------------~~~~~~~gt~~Y~APE 590 (697)
.||.|+|++|||||||||.||++++ ++.|||+|||++.... ...+..+||.-|+|||
T Consensus 708 EGLaYIH~~giIHRDLKP~NIFLd~--~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPE 785 (1351)
T KOG1035|consen 708 EGLAYIHDQGIIHRDLKPRNIFLDS--RNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPE 785 (1351)
T ss_pred HHHHHHHhCceeeccCCcceeEEcC--CCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHH
Confidence 9999999999999999999999995 8899999999986511 1234468899999999
Q ss_pred hhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHH
Q 005415 591 VIIGLP---YDQKIDLWSLGCILAELWTGEVLFPND-AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEV 666 (697)
Q Consensus 591 ~l~~~~---~s~ksDIWSLGviL~ELltG~~PF~~~-~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~ 666 (697)
++.+.. |+.|+||||||+||+||+ .||... ....++..+. .|.+|.. ..+|... ...-..
T Consensus 786 ll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR--~g~iP~~--------~~f~~~~---~~~e~s 849 (1351)
T KOG1035|consen 786 LLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLR--KGSIPEP--------ADFFDPE---HPEEAS 849 (1351)
T ss_pred HhcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcc--cCCCCCC--------ccccccc---chHHHH
Confidence 997654 999999999999999999 567543 3334555543 3333332 1112211 111122
Q ss_pred HHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 667 CFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 667 cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
...-++..-|.+|+|+.+++ .|+.
T Consensus 850 lI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 850 LIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHhcCCCccCCCHHHHhhccCCC
Confidence 22334444577899998888 5654
No 390
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-27 Score=268.52 Aligned_cols=209 Identities=25% Similarity=0.402 Sum_probs=181.0
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEe-----
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYH----- 487 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~----- 487 (697)
.+.|.|.+.||.|.+|.||++..+.+++.+|+||+..+....+.+..|.+||+.+. +|||++.+|++|..
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~-----~hpnv~~fyg~~~k~~~~~ 92 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS-----HHPNVATFYGAFIKKDPGN 92 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc-----CCCCcceEEEEEEEecCCC
Confidence 35699999999999999999999999999999999988777778888888998875 48999999999984
Q ss_pred cCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEee
Q 005415 488 LEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIID 566 (697)
Q Consensus 488 ~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~D 566 (697)
++.+|||||||++ +.-++++... ...+.+..+..|++.++.||.+||.+.++|||||-.|||++. ++.|||+|
T Consensus 93 ~DqLWLVMEfC~gGSVTDLVKn~~----g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~--e~~VKLvD 166 (953)
T KOG0587|consen 93 GDQLWLVMEFCGGGSVTDLVKNTK----GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTE--NAEVKLVD 166 (953)
T ss_pred CCeEEEEeeccCCccHHHHHhhhc----ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEec--cCcEEEee
Confidence 3679999999985 5556665443 223889999999999999999999999999999999999995 89999999
Q ss_pred CCCccccccc---cccccccCCCCCchhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Q 005415 567 LGSSCFQTDN---LCLYVQSRSYRAPEVIIG-----LPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARI 632 (697)
Q Consensus 567 FGla~~~~~~---~~~~~gt~~Y~APE~l~~-----~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I 632 (697)
||.+...+.. ..+.+|||.|||||++.. ..|+..+|+||||++..||.-|.+|+-+..+.-.|..|
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I 240 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 240 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC
Confidence 9998776543 456799999999999953 34788899999999999999999999988877666665
No 391
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.95 E-value=5.7e-27 Score=269.75 Aligned_cols=270 Identities=19% Similarity=0.126 Sum_probs=172.1
Q ss_pred cCceEEEEEeccCCCCceEEEEECCC----CcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE----
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHT----GVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY---- 484 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~----g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~---- 484 (697)
.++|.+.+.||+|+||.||+|.+..+ +..||||.+..... .|+.+...+.+.. +.++..++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e~l~~~~---~~~~~~~~~~~~~~ 201 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNERVRRAC---PNSCADFVYGFLEP 201 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHHHHHhhc---hhhHHHHHHhhhcc
Confidence 36799999999999999999999888 99999998864322 1222222222111 1111111111
Q ss_pred --EEecCeEEEEEEcccc-chHHHHHhhhcc--------------CCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCC
Q 005415 485 --FYHLEHLFIVCELLRA-NLYEFQKFNQES--------------GGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDL 547 (697)
Q Consensus 485 --f~~~~~l~LVmEyl~g-sL~~~l~~~~~~--------------~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDL 547 (697)
.......++||||+++ +|.+++...... ..........+..++.||+.||.|||+++|+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 2345679999999985 566666432110 00001223456779999999999999999999999
Q ss_pred CCccccccccCcceEEEeeCCCccccccc----cccccccCCCCCchhhcCC----------------------CCCchh
Q 005415 548 KPENILIKSYQRCEIKIIDLGSSCFQTDN----LCLYVQSRSYRAPEVIIGL----------------------PYDQKI 601 (697)
Q Consensus 548 KP~NILl~~~~~~~vKL~DFGla~~~~~~----~~~~~gt~~Y~APE~l~~~----------------------~~s~ks 601 (697)
||+|||++. +.+.+||+|||++...... .....+++.|+|||.+... .+..++
T Consensus 282 KP~NILl~~-~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSE-GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeC-CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999984 3578999999999754322 2346788999999976432 233456
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHhhcccc-----cccccCCchhhhhHHHHHHHHHHHhh
Q 005415 602 DLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLMQGQEI-----YKYFTKEYDLYYINEVCFANIFISLV 676 (697)
Q Consensus 602 DIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~~~~~~-----~~~~~~~~~l~~i~~~cw~~l~~~~~ 676 (697)
|||||||+||||+++..|+ .+....+.+++...+.....+....... .+.|...........+...+++...|
T Consensus 361 DVwSlGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred ccHHHHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 9999999999999976554 4444555555554444333332211110 00010000000011134555666678
Q ss_pred hhccCHHHHH--HhhcccCC
Q 005415 677 VIRLTLEYAA--LWLFGIDQ 694 (697)
Q Consensus 677 ~~r~t~e~~~--~wl~~~~~ 694 (697)
.+|+|+++++ +|+.+...
T Consensus 439 ~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 439 RQRISAKAALAHPYFDREGL 458 (566)
T ss_pred ccCCCHHHHhCCcCcCCCCc
Confidence 8899999999 99986554
No 392
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-27 Score=256.26 Aligned_cols=256 Identities=23% Similarity=0.229 Sum_probs=186.5
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC----
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---- 489 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~---- 489 (697)
...++.+.||+|.||.||+|+. +++.||||++.... ...+..|..|..... ..|+||+++++.-....
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~----m~h~nIl~Fi~~ekr~t~~~~ 281 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQE--KQSFQNEKNIYSLPG----MKHENILQFIGAEKRGTADRM 281 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCHHH--HHHHHhHHHHHhccC----ccchhHHHhhchhccCCcccc
Confidence 3467788999999999999974 56999999998543 357778888887763 46999999999887665
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh---------cCccccCCCCccccccccCc
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS---------LGIIHCDLKPENILIKSYQR 559 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs---------~gIvHrDLKP~NILl~~~~~ 559 (697)
.++||++|.+ |+|.++++.+. +++....+|+..|++||+|||+ ..|+|||||..||||.. +
T Consensus 282 eywLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~--D 352 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN--D 352 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc--C
Confidence 7899999987 88999998654 8999999999999999999996 24999999999999995 8
Q ss_pred ceEEEeeCCCccccccc-----cccccccCCCCCchhhcCCC-CC-----chhhHHHHHHHHHHHHhCCCCCC-CCcHHH
Q 005415 560 CEIKIIDLGSSCFQTDN-----LCLYVQSRSYRAPEVIIGLP-YD-----QKIDLWSLGCILAELWTGEVLFP-NDAVVM 627 (697)
Q Consensus 560 ~~vKL~DFGla~~~~~~-----~~~~~gt~~Y~APE~l~~~~-~s-----~ksDIWSLGviL~ELltG~~PF~-~~~~~e 627 (697)
++..|+|||+|...... ....+||.+|||||++.+.. +. .+.||||+|.+||||+++-.-+. +..+.-
T Consensus 353 lTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 353 LTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred CcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 89999999999765432 22368999999999997642 22 36999999999999998644432 111111
Q ss_pred HHHHHHHhhCCCCHHHHh-------hcccccccccCC---chhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 628 ILARIIGMLGPIDLEMLM-------QGQEIYKYFTKE---YDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 628 ~l~~I~~~lg~~p~e~~~-------~~~~~~~~~~~~---~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
++.--.+....|..+.+. ..+.++..|.+. ..+...+++||......+.+.-...||..
T Consensus 433 qlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~ 501 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMA 501 (534)
T ss_pred cCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHH
Confidence 111111111222222221 122334444443 35668899999988655555555555555
No 393
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=7.7e-28 Score=269.81 Aligned_cols=242 Identities=22% Similarity=0.268 Sum_probs=193.0
Q ss_pred eEEEEEeccCCCCceEEEEECCCCc----EEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGV----DVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~----~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.+..++||+|+||+||+|.+...|+ +||||++.... +....+++|.-++..| +|||+++|++++....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl------dHpnl~RLLgvc~~s~ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL------DHPNLLRLLGVCMLST 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC------CCchHHHHhhhcccch
Confidence 4456789999999999999876554 68888887543 2345666776666655 5899999999998765
Q ss_pred eEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 490 HLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 490 ~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
+.||++|++ |.|+++++.++.. +-.+..+.|..||++||.|||++++|||||-.+|||+.. ...+||+|||
T Consensus 772 -~qlvtq~mP~G~LlDyvr~hr~~-----igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks--P~hvkitdfg 843 (1177)
T KOG1025|consen 772 -LQLVTQLMPLGCLLDYVREHRDN-----IGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS--PNHVKITDFG 843 (1177)
T ss_pred -HHHHHHhcccchHHHHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC--CCeEEEEecc
Confidence 889999998 7899999876654 777889999999999999999999999999999999996 7889999999
Q ss_pred Ccccccccccc---ccc--cCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHhhCCCCHH
Q 005415 569 SSCFQTDNLCL---YVQ--SRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGMLGPIDLE 642 (697)
Q Consensus 569 la~~~~~~~~~---~~g--t~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~lg~~p~e 642 (697)
+++........ ..| .+-|||-|.+....|+.++|||||||++||++| |..||.+.+..++-..+
T Consensus 844 la~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll---------- 913 (1177)
T KOG1025|consen 844 LAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL---------- 913 (1177)
T ss_pred hhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH----------
Confidence 99876544222 222 456999999999999999999999999999999 99999998887655443
Q ss_pred HHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHH
Q 005415 643 MLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLE 683 (697)
Q Consensus 643 ~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e 683 (697)
..+.++...-.+.-+++.+|..||.-.-..+|.-+.+.+
T Consensus 914 --e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 914 --EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred --hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 334445555567789999999999866544444444333
No 394
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.94 E-value=4.3e-26 Score=229.25 Aligned_cols=236 Identities=35% Similarity=0.525 Sum_probs=185.7
Q ss_pred CCCceEEEEECCCCcEEEEEEEecchhh--hHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcccc-ch
Q 005415 426 AFSKVFQAQDLHTGVDVCLKIIKNDKDF--FDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLRA-NL 502 (697)
Q Consensus 426 ~fG~Vy~a~d~~~g~~VAVKii~~~~~~--~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEyl~g-sL 502 (697)
+||.||+|.+..+++.+|+|++...... ...+.+|+++++.+ +|+||+++++++......+++||++++ +|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 74 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL------KHPNIVRLYDVFEDEDKLYLVMEYCDGGDL 74 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC------CCCcHHHHHhheeeCCEEEEEEeCCCCCCH
Confidence 5899999999888999999999754322 46778888888877 478999999999999999999999987 77
Q ss_pred HHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc--cccc
Q 005415 503 YEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN--LCLY 580 (697)
Q Consensus 503 ~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~--~~~~ 580 (697)
.+++..... ++...+..++.+++.+|.+||+.+|+|+||+|+||+++. ++.++|+|||.+...... ....
T Consensus 75 ~~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~--~~~~~l~d~~~~~~~~~~~~~~~~ 146 (244)
T smart00220 75 FDLLKKRGR------LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE--DGHVKLADFGLARQLDPGGLLTTF 146 (244)
T ss_pred HHHHHhccC------CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC--CCcEEEccccceeeeccccccccc
Confidence 777654322 788899999999999999999999999999999999995 689999999998766543 3445
Q ss_pred cccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHhhCCCCHHHHhhcccccccccCCch
Q 005415 581 VQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPN-DAVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYD 659 (697)
Q Consensus 581 ~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~-~~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~ 659 (697)
.++..|+|||.+.+..++.++||||||+++++|++|..||.. ......+..+......+.... ......
T Consensus 147 ~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 216 (244)
T smart00220 147 VGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE----------WKISPE 216 (244)
T ss_pred cCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcccc----------ccCCHH
Confidence 678899999999988889999999999999999999999987 444444443322211111100 002345
Q ss_pred hhhhHHHHHHHHHHHhhhhccCHHHHH--Hhh
Q 005415 660 LYYINEVCFANIFISLVVIRLTLEYAA--LWL 689 (697)
Q Consensus 660 l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl 689 (697)
+..++..||... |..|+++++++ +|+
T Consensus 217 ~~~~i~~~l~~~----p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 217 AKDLIRKLLVKD----PEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHHHHccCC----chhccCHHHHhhCCCC
Confidence 667777776644 77889998887 654
No 395
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=2.4e-25 Score=222.46 Aligned_cols=206 Identities=36% Similarity=0.555 Sum_probs=172.1
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
|.+.+.||.|++|.||++.+..+++.+|+|.+..... ....+.+|+..++.+ +|+|++++++++......++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~------~~~~i~~~~~~~~~~~~~~~ 74 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL------KHPNIVKLYGVFEDPEPLYL 74 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC------CCCChhhheeeeecCCceEE
Confidence 5678999999999999999988899999999986543 356777788888777 37899999999998899999
Q ss_pred EEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 494 VCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 494 VmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
++|++.+ +|.+++...... +++..+..++.+++.+|.+||+.+++|+||+|.||+++. .+.++|+|||.+..
T Consensus 75 v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~--~~~~~l~d~g~~~~ 147 (225)
T smart00221 75 VMEYCEGGDLFDYLRKKGGK-----LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM--DGLVKLADFGLARF 147 (225)
T ss_pred EEeccCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeeCceeeE
Confidence 9999987 777776543221 678889999999999999999999999999999999995 68999999999876
Q ss_pred ccccc----ccccccCCCCCchhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CcHH-HHHHHHHH
Q 005415 573 QTDNL----CLYVQSRSYRAPEVI-IGLPYDQKIDLWSLGCILAELWTGEVLFPN-DAVV-MILARIIG 634 (697)
Q Consensus 573 ~~~~~----~~~~gt~~Y~APE~l-~~~~~s~ksDIWSLGviL~ELltG~~PF~~-~~~~-e~l~~I~~ 634 (697)
..... ....++..|++||.+ ....++.++|+|+||+++++|++|+.||.. .+.. .+...|..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~ 216 (225)
T smart00221 148 IHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSF 216 (225)
T ss_pred ecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhc
Confidence 65432 445677889999998 666788899999999999999999999987 4444 55555543
No 396
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.93 E-value=4.9e-26 Score=278.09 Aligned_cols=252 Identities=18% Similarity=0.206 Sum_probs=176.6
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFI 493 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~L 493 (697)
..+...+.||+|+||.||+|++..++..||||.+..... ....|+++++.+ +||||+++++++......++
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l------~HpnIv~~~~~~~~~~~~~l 760 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKL------QHPNIVKLIGLCRSEKGAYL 760 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhC------CCCCcceEEEEEEcCCCCEE
Confidence 356677899999999999999989999999999875432 123456666655 58999999999999999999
Q ss_pred EEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHH---hcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 494 VCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLH---SLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 494 VmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLH---s~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
||||++ ++|.+++. . +++..+..++.|++.||+||| +.+|+||||||+||+++. ++..++. |+.
T Consensus 761 v~Ey~~~g~L~~~l~---~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~--~~~~~~~-~~~ 828 (968)
T PLN00113 761 IHEYIEGKNLSEVLR---N------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG--KDEPHLR-LSL 828 (968)
T ss_pred EEeCCCCCcHHHHHh---c------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC--CCceEEE-ecc
Confidence 999997 56766663 1 788899999999999999999 669999999999999985 4444443 444
Q ss_pred ccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHH-hhCCCCHHHHhhc
Q 005415 570 SCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV-VMILARIIG-MLGPIDLEMLMQG 647 (697)
Q Consensus 570 a~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~-~e~l~~I~~-~lg~~p~e~~~~~ 647 (697)
...... .....+++.|+|||++.+..++.++|||||||++|||+||+.||..... ...+.+... .........+...
T Consensus 829 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (968)
T PLN00113 829 PGLLCT-DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDP 907 (968)
T ss_pred cccccc-CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCc
Confidence 432221 1223678999999999999999999999999999999999999953211 011111111 1111111111000
Q ss_pred cc---ccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHHHhhcc
Q 005415 648 QE---IYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAALWLFG 691 (697)
Q Consensus 648 ~~---~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~~wl~~ 691 (697)
.. ..........+..++..||... |..|++++++...|..
T Consensus 908 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~----P~~RPt~~evl~~L~~ 950 (968)
T PLN00113 908 SIRGDVSVNQNEIVEVMNLALHCTATD----PTARPCANDVLKTLES 950 (968)
T ss_pred cccCCCCccHHHHHHHHHHHHhhCcCC----chhCcCHHHHHHHHHH
Confidence 00 0000011124556777888765 7888899888855543
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.93 E-value=5.9e-25 Score=248.38 Aligned_cols=207 Identities=22% Similarity=0.355 Sum_probs=149.0
Q ss_pred cCceEEEEEeccCCCCceEEEEEC----------------CCCcEEEEEEEecchhh---------------hHhHHHHH
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDL----------------HTGVDVCLKIIKNDKDF---------------FDQSLDEI 461 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~----------------~~g~~VAVKii~~~~~~---------------~~~~~~Ei 461 (697)
.++|.+.++||+|+||+||+|.+. ..++.||||.+...... .+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 467999999999999999999752 24568999998753221 11223456
Q ss_pred HHHHHhcccCCCCCCceeEEEEEEEe--------cCeEEEEEEccc-cchHHHHHhhhcc------------------CC
Q 005415 462 KLLKLVNKNDPADEHHILRLYDYFYH--------LEHLFIVCELLR-ANLYEFQKFNQES------------------GG 514 (697)
Q Consensus 462 ~iL~~L~~~~~~~hpnIv~l~~~f~~--------~~~l~LVmEyl~-gsL~~~l~~~~~~------------------~~ 514 (697)
.++..+++. ...+.++++++++|.. ....++||||++ ++|.+++...... ..
T Consensus 224 ~~l~~l~~~-~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 224 YMCAKIKRN-PIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHhhcc-cchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 666666543 2335567788888763 356899999998 4666665432100 01
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccccc--c--cccccCCCCCch
Q 005415 515 EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNL--C--LYVQSRSYRAPE 590 (697)
Q Consensus 515 ~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~--~--~~~gt~~Y~APE 590 (697)
...+++..++.++.|++.||.|||+.+|+||||||+|||++. ++.+||+|||++....... . ...+++.|+|||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV--DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC--CCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 112466788899999999999999999999999999999985 6789999999986543221 1 123478999999
Q ss_pred hhcCCC--------------------C--CchhhHHHHHHHHHHHHhCCC-CCCC
Q 005415 591 VIIGLP--------------------Y--DQKIDLWSLGCILAELWTGEV-LFPN 622 (697)
Q Consensus 591 ~l~~~~--------------------~--s~ksDIWSLGviL~ELltG~~-PF~~ 622 (697)
.+.... + ..+.||||+||++++|++|.. ||.+
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 985432 1 124799999999999999886 7754
No 398
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.93 E-value=1.3e-25 Score=235.34 Aligned_cols=250 Identities=19% Similarity=0.242 Sum_probs=200.5
Q ss_pred cCceEEEEEeccCCCCceEEEEECCC-----CcEEEEEEEecch--hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHT-----GVDVCLKIIKNDK--DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~-----g~~VAVKii~~~~--~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
..|+++..++-+|.||.||.|.+... .+.|.+|.++... -....++.|-.++..+ .|||++.+.++.
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~------sH~nll~V~~V~ 356 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA------SHPNLLSVLGVS 356 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC------cCCCccceeEEE
Confidence 46788888999999999999987643 3456677766433 2344555565555444 489999999988
Q ss_pred Eec-CeEEEEEEccc-cchHHHHHhhhccC--CCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcce
Q 005415 486 YHL-EHLFIVCELLR-ANLYEFQKFNQESG--GEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCE 561 (697)
Q Consensus 486 ~~~-~~l~LVmEyl~-gsL~~~l~~~~~~~--~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~ 561 (697)
... ...++++.+++ ++|..++...+... ....++..++..++.|++.|+.|||+.||||.||..+|++|+. ..+
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd--~Lq 434 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDD--QLQ 434 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehh--hee
Confidence 754 66889999998 88988887544322 2334667778889999999999999999999999999999994 789
Q ss_pred EEEeeCCCcccccccccccc-----ccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHh
Q 005415 562 IKIIDLGSSCFQTDNLCLYV-----QSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPNDAVVMILARIIGM 635 (697)
Q Consensus 562 vKL~DFGla~~~~~~~~~~~-----gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~~~~e~l~~I~~~ 635 (697)
+||+|=.+++..-.....-. .+..||+||.+....|+.++|+|||||++|||+| |+.||...++.++...+
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl--- 511 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL--- 511 (563)
T ss_pred EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH---
Confidence 99999998876544332222 2566999999999999999999999999999999 99999998888776554
Q ss_pred hCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 636 LGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 636 lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
..+.++.+.|+++.+|+.+|..||+-+ |.+|.+-+|+.
T Consensus 512 ---------kdGyRlaQP~NCPDeLf~vMacCWall----peeRPsf~Qlv 549 (563)
T KOG1024|consen 512 ---------KDGYRLAQPFNCPDELFTVMACCWALL----PEERPSFSQLV 549 (563)
T ss_pred ---------hccceecCCCCCcHHHHHHHHHHHhcC----cccCCCHHHHH
Confidence 567888999999999999999999966 88888888876
No 399
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.93 E-value=4.2e-26 Score=257.79 Aligned_cols=192 Identities=29% Similarity=0.379 Sum_probs=159.2
Q ss_pred EEeccCCCCc-eEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEcc
Q 005415 420 EYLGSAAFSK-VFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELL 498 (697)
Q Consensus 420 e~LG~G~fG~-Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEyl 498 (697)
+.+|.|+.|+ ||+|. ..|+.||||.+-.. ..+-..+|+..|+.-. .|||||++|+.-.+..++||..|.|
T Consensus 515 eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e--~~~~A~rEi~lL~eSD-----~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGV--YEGREVAVKRLLEE--FFDFAQREIQLLQESD-----EHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred HHcccCCCCcEEEEEe--eCCceehHHHHhhH--hHHHHHHHHHHHHhcc-----CCCceEEEEeeccCCceEEEEehHh
Confidence 5689999987 78997 57899999988643 4456788999998764 5899999999999999999999999
Q ss_pred ccchHHHHHhh-hccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc---cCcceEEEeeCCCccccc
Q 005415 499 RANLYEFQKFN-QESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS---YQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 499 ~gsL~~~l~~~-~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~---~~~~~vKL~DFGla~~~~ 574 (697)
..+|.+++... ..... ......+.++.|+++||++||+.+||||||||.||||.. .....++|+|||+++...
T Consensus 586 ~~sL~dlie~~~~d~~~---~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEM---QSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhh---cccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 99999999864 11110 111345778999999999999999999999999999985 345689999999998765
Q ss_pred cc------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 005415 575 DN------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT-GEVLFPND 623 (697)
Q Consensus 575 ~~------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt-G~~PF~~~ 623 (697)
.. .....||-+|+|||++....-+.++||+||||++|..++ |.+||...
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~ 718 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS 718 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch
Confidence 43 234578999999999998888889999999999999999 59999754
No 400
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.92 E-value=2.3e-25 Score=236.61 Aligned_cols=212 Identities=27% Similarity=0.438 Sum_probs=173.6
Q ss_pred ecCceEEEEEeccCCCCceEEEEECC---CCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 412 IAGRYYVTEYLGSAAFSKVFQAQDLH---TGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 412 i~~rY~i~e~LG~G~fG~Vy~a~d~~---~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
+.+.|.++++||.|.|++||++.+.. ..+.||+|.+..... ..++..|+++|..+.. +.||+.+.+++...
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG-----~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGG-----SDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhcc-----chhhhcchhhhccC
Confidence 34679999999999999999999877 789999999875433 4678999999999975 46999999999999
Q ss_pred CeEEEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
+...+||||++.. ..+++. . ++...++.+++.++.||.++|.+|||||||||.|+|.+. ..++-.|+||
T Consensus 108 d~v~ivlp~~~H~~f~~l~~---~------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~-~t~rg~LvDF 177 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYR---S------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR-RTQRGVLVDF 177 (418)
T ss_pred CeeEEEecccCccCHHHHHh---c------CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc-ccCCceEEec
Confidence 9999999999864 333332 1 778899999999999999999999999999999999986 5677899999
Q ss_pred CCcccc-----------------cc------------------------------ccccccccCCCCCchhhcCCC-CCc
Q 005415 568 GSSCFQ-----------------TD------------------------------NLCLYVQSRSYRAPEVIIGLP-YDQ 599 (697)
Q Consensus 568 Gla~~~-----------------~~------------------------------~~~~~~gt~~Y~APE~l~~~~-~s~ 599 (697)
|++... .. ......||++|+|||++...+ .+.
T Consensus 178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt 257 (418)
T KOG1167|consen 178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT 257 (418)
T ss_pred hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence 987510 00 001147899999999998765 688
Q ss_pred hhhHHHHHHHHHHHHhCCCCC-CCCcHHHHHHHHHHhhCCC
Q 005415 600 KIDLWSLGCILAELWTGEVLF-PNDAVVMILARIIGMLGPI 639 (697)
Q Consensus 600 ksDIWSLGviL~ELltG~~PF-~~~~~~e~l~~I~~~lg~~ 639 (697)
++||||.|||++-+++++.|| ...++.+.+.+|+...|.-
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~ 298 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSA 298 (418)
T ss_pred ccceeeccceeehhhccccccccCccccchHHHHHHHhChH
Confidence 999999999999999999998 4455566777776666543
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.2e-25 Score=224.56 Aligned_cols=199 Identities=22% Similarity=0.338 Sum_probs=163.3
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE-EEecCeE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY-FYHLEHL 491 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~-f~~~~~l 491 (697)
.+.|.|.+.||.|.||.+-+++++.+...+++|.+.........+.+|..---.|. .|.||+.-|+. |+..+..
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls-----~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLS-----PHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeec-----cchhhhHHHHHHhhcCceE
Confidence 46799999999999999999999999999999999877666667777765444443 47788877654 5666888
Q ss_pred EEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
+++|||++ |+|.+.+... -+-+.....++.|+++||.|||++++||||||.+||||-..+..++||||||.+
T Consensus 98 vF~qE~aP~gdL~snv~~~-------GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAA-------GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred EEeeccCccchhhhhcCcc-------cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccc
Confidence 89999998 6665544321 167788899999999999999999999999999999998767779999999999
Q ss_pred cccccccccccccCCCCCchhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005415 571 CFQTDNLCLYVQSRSYRAPEVIIGL-----PYDQKIDLWSLGCILAELWTGEVLFPND 623 (697)
Q Consensus 571 ~~~~~~~~~~~gt~~Y~APE~l~~~-----~~s~ksDIWSLGviL~ELltG~~PF~~~ 623 (697)
+..+........+..|.+||+.... ...+.+|||.||+++|.++||.+||+..
T Consensus 171 ~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka 228 (378)
T KOG1345|consen 171 RKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA 228 (378)
T ss_pred cccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh
Confidence 8777665555567779999987533 2566799999999999999999999744
No 402
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=6.2e-24 Score=211.13 Aligned_cols=225 Identities=21% Similarity=0.336 Sum_probs=188.1
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
++.++|+++++||+|+||.+|+|....+|+.||||+-+.... ..+...|.++.+.|+.. ..|..+..++.+..+
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-hpqL~yEskvY~iL~~g-----~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-HPQLLYESKVYRILQGG-----VGIPHIRHYGTEKDY 85 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-CcchhHHHHHHHHhccC-----CCCchhhhhcccccc
Confidence 456899999999999999999999999999999999875443 36788999999999864 467777778888899
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC-cceEEEeeCCC
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ-RCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~-~~~vKL~DFGl 569 (697)
-.+||++++.+|.++.....+. ++..+++.++-|++.-+.|+|.++++||||||+|+|+.-.. ..++.|+|||+
T Consensus 86 nvlVMdLLGPsLEdLfnfC~R~-----ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 86 NVLVMDLLGPSLEDLFNFCSRR-----FTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred ceeeeeccCccHHHHHHHHhhh-----hhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccc
Confidence 9999999999999998877654 99999999999999999999999999999999999987422 34789999999
Q ss_pred ccccccc----------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHHHHhh
Q 005415 570 SCFQTDN----------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV---VMILARIIGML 636 (697)
Q Consensus 570 a~~~~~~----------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~---~e~l~~I~~~l 636 (697)
|+...+. .....||..|.+--...+...+...|+-|+|.+|..+..|..||++... .+-..+|.+..
T Consensus 161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK 240 (341)
T KOG1163|consen 161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKK 240 (341)
T ss_pred hhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhh
Confidence 9764432 2235789999998888888888999999999999999999999998654 45566677666
Q ss_pred CCCCHHHHhh
Q 005415 637 GPIDLEMLMQ 646 (697)
Q Consensus 637 g~~p~e~~~~ 646 (697)
-..|.+.+..
T Consensus 241 ~s~~ie~LC~ 250 (341)
T KOG1163|consen 241 MSTPIEVLCK 250 (341)
T ss_pred cCCCHHHHhC
Confidence 6666665544
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.90 E-value=1e-22 Score=198.76 Aligned_cols=180 Identities=43% Similarity=0.678 Sum_probs=154.2
Q ss_pred eccCCCCceEEEEECCCCcEEEEEEEecchh--hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEccc
Q 005415 422 LGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD--FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCELLR 499 (697)
Q Consensus 422 LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~--~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEyl~ 499 (697)
||.|++|.||++.+..+++.+++|++..... ....+.+|+.+++.+. |++|+++++++......+++||++.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~------~~~i~~~~~~~~~~~~~~~~~e~~~ 74 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN------HPNIVKLYGVFEDENHLYLVMEYCE 74 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcC------CCCeeeEeeeeecCCeEEEEEecCC
Confidence 6899999999999888899999999986644 2467888888888885 5799999999999899999999998
Q ss_pred -cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccccc--
Q 005415 500 -ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDN-- 576 (697)
Q Consensus 500 -gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~-- 576 (697)
++|.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ..+.++|+|||.+......
T Consensus 75 ~~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~-~~~~~~l~d~~~~~~~~~~~~ 148 (215)
T cd00180 75 GGSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS-DNGKVKLADFGLSKLLTSDKS 148 (215)
T ss_pred CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC-CCCcEEEecCCceEEccCCcc
Confidence 67777765432 12788999999999999999999999999999999999984 1578999999998766544
Q ss_pred -cccccccCCCCCchhhcCC-CCCchhhHHHHHHHHHHH
Q 005415 577 -LCLYVQSRSYRAPEVIIGL-PYDQKIDLWSLGCILAEL 613 (697)
Q Consensus 577 -~~~~~gt~~Y~APE~l~~~-~~s~ksDIWSLGviL~EL 613 (697)
.....+...|++||.+... .++.+.|+|+||+++++|
T Consensus 149 ~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 3445678889999999877 788999999999999999
No 404
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.90 E-value=1.3e-24 Score=240.29 Aligned_cols=247 Identities=22% Similarity=0.286 Sum_probs=194.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
.+|.++..+|.|.+|.||+|+|+.+++..|+|+++... ....-+.+|+-+++..+ ||||+.+++.+.....+|
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~------h~nivay~gsylr~dklw 88 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCR------HPNIVAYFGSYLRRDKLW 88 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCC------CcChHHHHhhhhhhcCcE
Confidence 57999999999999999999999999999999998643 33455667887777764 889999999999999999
Q ss_pred EEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcc
Q 005415 493 IVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSC 571 (697)
Q Consensus 493 LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~ 571 (697)
|+||||+++ |.+..... .++++.++....+..+++|.|||+.|-+|||||-.|||++. .+.+||+|||.+.
T Consensus 89 icMEycgggslQdiy~~T------gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd--~gDvklaDfgvsa 160 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVT------GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTD--EGDVKLADFGVSA 160 (829)
T ss_pred EEEEecCCCcccceeeec------ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecc--cCceeecccCchh
Confidence 999999864 54443322 23888899999999999999999999999999999999995 8999999999987
Q ss_pred ccccc---cccccccCCCCCchhh---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 572 FQTDN---LCLYVQSRSYRAPEVI---IGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 572 ~~~~~---~~~~~gt~~Y~APE~l---~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
..+.. ...+.||++|||||+. ....|...+|||++|++..|+---++|--...+...+..+.+..-+||. .
T Consensus 161 qitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~-l-- 237 (829)
T KOG0576|consen 161 QITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPT-L-- 237 (829)
T ss_pred hhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCc-c--
Confidence 65543 4458999999999987 3556899999999999999999999998888888888777665555443 1
Q ss_pred hcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 646 QGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 646 ~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
.....|++..-+-.+.-+.+-+-.|.+.|.++
T Consensus 238 ---------kDk~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 238 ---------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred ---------cCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 11122333333333444445555666666554
No 405
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.4e-22 Score=216.30 Aligned_cols=205 Identities=28% Similarity=0.343 Sum_probs=170.4
Q ss_pred ceEEEEEeccCCCCceEEEEECCCC-cEEEEEEEecchh-hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE-EecCeE
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTG-VDVCLKIIKNDKD-FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF-YHLEHL 491 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g-~~VAVKii~~~~~-~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f-~~~~~l 491 (697)
+|++.++||+|+||.||++.+..++ ..+|+|+...... ....+..|+.++..+.. ...-+++..+++.. ......
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~--~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK--KNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh--hcCCCCCCEEEEeccCCCcee
Confidence 8999999999999999999987764 6899998876432 22267889999999875 11235899999999 477889
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccC-c--ceEEEeeCC
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQ-R--CEIKIIDLG 568 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~-~--~~vKL~DFG 568 (697)
|+||+.++.+|.++..... ...++..++..|+.|++.+|.+||+.|++||||||.|+++.... . ..+.|.|||
T Consensus 97 ~iVM~l~G~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEEEeccCccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 9999999999999886554 22399999999999999999999999999999999999998532 1 579999999
Q ss_pred Ccc--ccc-c---------c-cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH
Q 005415 569 SSC--FQT-D---------N-LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV 625 (697)
Q Consensus 569 la~--~~~-~---------~-~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~ 625 (697)
+++ ... . . ...+.||..|+++.+..+...+.+.|+||++.++.+++.|..||.+...
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 998 311 1 1 1234589999999999999999999999999999999999999977653
No 406
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2e-22 Score=208.18 Aligned_cols=224 Identities=21% Similarity=0.292 Sum_probs=190.3
Q ss_pred eecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 411 VIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 411 ~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+++-.|++.++||.|+||.++.|.+..++++||||.-... ....++..|.+..+.|.. .+.|...|-+...+.+
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-S~APQLrdEYr~YKlL~g-----~~GIP~vYYFGqeG~~ 98 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-SEAPQLRDEYRTYKLLGG-----TEGIPQVYYFGQEGKY 98 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEecccc-CCcchHHHHHHHHHHHcC-----CCCCCceeeeccccch
Confidence 4566899999999999999999999999999999986533 234688899999999975 4689999988888899
Q ss_pred EEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCcccccccc---CcceEEEeeC
Q 005415 491 LFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSY---QRCEIKIIDL 567 (697)
Q Consensus 491 l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~---~~~~vKL~DF 567 (697)
-.||||+++.+|.++.....+. |+..++..++.||+.-++++|++.+|.|||||+|+||... +...|.|+||
T Consensus 99 NiLVidLLGPSLEDLFD~CgR~-----FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 99 NILVIDLLGPSLEDLFDLCGRR-----FSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred hhhhhhhhCcCHHHHHHHhcCc-----ccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEec
Confidence 9999999999999999877665 9999999999999999999999999999999999999752 3457899999
Q ss_pred CCcccccccc----------ccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC---cHHHHHHHHHH
Q 005415 568 GSSCFQTDNL----------CLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPND---AVVMILARIIG 634 (697)
Q Consensus 568 Gla~~~~~~~----------~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~---~~~e~l~~I~~ 634 (697)
|+|+...+.. ....||..||+--..+|...+.+.|+-|||-+++..|.|.+||++. +..+-+.+|=+
T Consensus 174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe 253 (449)
T KOG1165|consen 174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGE 253 (449)
T ss_pred cchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcc
Confidence 9998755432 2357899999999999999999999999999999999999999874 45667777765
Q ss_pred hhCCCCHHHHh
Q 005415 635 MLGPIDLEMLM 645 (697)
Q Consensus 635 ~lg~~p~e~~~ 645 (697)
....-|.+.+.
T Consensus 254 ~Kr~T~i~~Lc 264 (449)
T KOG1165|consen 254 TKRSTPIEVLC 264 (449)
T ss_pred ccccCCHHHHH
Confidence 55555554444
No 407
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.86 E-value=2.4e-22 Score=240.92 Aligned_cols=142 Identities=19% Similarity=0.184 Sum_probs=113.8
Q ss_pred CceeEEEEEEE-------ecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCC
Q 005415 476 HHILRLYDYFY-------HLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLK 548 (697)
Q Consensus 476 pnIv~l~~~f~-------~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLK 548 (697)
+||++++++|. ....++++||+++++|.+++.... ..+++..++.+++||+.||.|||++||+|||||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 36777778772 234678899999999998886322 228899999999999999999999999999999
Q ss_pred Cccccccc-----------------cCcceEEEeeCCCcccccc-------------------ccccccccCCCCCchhh
Q 005415 549 PENILIKS-----------------YQRCEIKIIDLGSSCFQTD-------------------NLCLYVQSRSYRAPEVI 592 (697)
Q Consensus 549 P~NILl~~-----------------~~~~~vKL~DFGla~~~~~-------------------~~~~~~gt~~Y~APE~l 592 (697)
|+||||+. +.++.+||+|||+++.... .....++|+.|+|||++
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 187 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED 187 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence 99999963 2345677888887754211 01123578889999999
Q ss_pred cCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005415 593 IGLPYDQKIDLWSLGCILAELWTGEVLFPN 622 (697)
Q Consensus 593 ~~~~~s~ksDIWSLGviL~ELltG~~PF~~ 622 (697)
.+..++.++|||||||+||||++|.+|+..
T Consensus 188 ~~~~~~~~sDVwSlGviL~ELl~~~~~~~~ 217 (793)
T PLN00181 188 NGSSSNCASDVYRLGVLLFELFCPVSSREE 217 (793)
T ss_pred ccCCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence 999999999999999999999999988763
No 408
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.84 E-value=1.2e-21 Score=179.18 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=83.4
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
+.+.|+|+|++| +|+ + .|.+|||||++|+|+.++ +|+||+++|+|+||+|||+|.|+ ++.+++ +++|.++||
T Consensus 12 ~~~~L~V~vikA~~L~-~--~g~sDPYVKv~L~~~~k~-~k~kT~v~rktlnPvfnE~f~F~--v~~~~l~~~tL~~~V~ 85 (118)
T cd08677 12 QKAELHVNILEAENIS-V--DAGCECYISGCVSVSEGQ-KEAQTALKKLALHTQWEEELVFP--LPEEESLDGTLTLTLR 85 (118)
T ss_pred cCCEEEEEEEEecCCC-C--CCCCCeEEEEEEcCCcCc-cEEEcceecCCCCCccccEEEEe--CCHHHhCCcEEEEEEE
Confidence 568999999999 998 3 477999999999987653 57799999999999999999999 998888 666999999
Q ss_pred cCCCCCCCCcccccccCcccc
Q 005415 342 DNSDTRDGEVNGALHEGKADA 362 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~ 362 (697)
|+|++++|++||++.++..+.
T Consensus 86 d~Drfs~~d~IG~v~l~l~~~ 106 (118)
T cd08677 86 CCDRFSRHSTLGELRLKLADV 106 (118)
T ss_pred eCCCCCCCceEEEEEEccccc
Confidence 999999999999999987665
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=1.6e-20 Score=204.30 Aligned_cols=162 Identities=21% Similarity=0.208 Sum_probs=124.0
Q ss_pred eCceecCceEEEEEeccCCCCceEEEEECC-CCcEEEEEEEecc------hhhhHhHHHHHHHHHHhcccCCCCCCcee-
Q 005415 408 LNTVIAGRYYVTEYLGSAAFSKVFQAQDLH-TGVDVCLKIIKND------KDFFDQSLDEIKLLKLVNKNDPADEHHIL- 479 (697)
Q Consensus 408 ~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~-~g~~VAVKii~~~------~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv- 479 (697)
....+.++|.+.+.||+|+||+||+|++.. +++.||||++... ......+.+|+++|+.++ |+||+
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~------h~~iv~ 85 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR------GIGVVP 85 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc------CCCCCc
Confidence 345667899999999999999999998876 6788899986532 223456789999999986 56777
Q ss_pred EEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCC-CCccccccccC
Q 005415 480 RLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDL-KPENILIKSYQ 558 (697)
Q Consensus 480 ~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDL-KP~NILl~~~~ 558 (697)
.+++. ...++||||+.+..+.... . .. ...++.|+++||.|||++||+|||| ||+|||++.
T Consensus 86 ~l~~~----~~~~LVmE~~~G~~L~~~~----~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~-- 147 (365)
T PRK09188 86 QLLAT----GKDGLVRGWTEGVPLHLAR----P-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGP-- 147 (365)
T ss_pred EEEEc----CCcEEEEEccCCCCHHHhC----c-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcC--
Confidence 45442 4589999999876543221 0 11 1467889999999999999999999 999999974
Q ss_pred cceEEEeeCCCccccccc-----------cccccccCCCCCchhhc
Q 005415 559 RCEIKIIDLGSSCFQTDN-----------LCLYVQSRSYRAPEVII 593 (697)
Q Consensus 559 ~~~vKL~DFGla~~~~~~-----------~~~~~gt~~Y~APE~l~ 593 (697)
++.+||+|||+++..... .....+++.|.|||.+.
T Consensus 148 ~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 148 DGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred CCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 678999999998754332 12346678899999984
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=4.2e-19 Score=182.45 Aligned_cols=197 Identities=35% Similarity=0.526 Sum_probs=161.6
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
|.+.+.||.|+|+.||++.+. ..+++|.+..... ....+.+|+.++..+.+. ++|+++++.+......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----~~i~~~~~~~~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP-----PNIVKLYDFFQDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCC-----cceeeEEEEEecCCEE
Confidence 788999999999999999976 7889999875432 356778888888887642 2799999999877778
Q ss_pred EEEEEccccchHH-HHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcc-eEEEeeCCC
Q 005415 492 FIVCELLRANLYE-FQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRC-EIKIIDLGS 569 (697)
Q Consensus 492 ~LVmEyl~gsL~~-~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~-~vKL~DFGl 569 (697)
+++++++.+.... ++...... ..+.......++.|++.++.|+|+.+++|||+||+||+++. .. .++++|||.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~--~~~~~~l~dfg~ 148 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR--DGRVVKLIDFGL 148 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC--CCCeEEEeccCc
Confidence 9999999865443 33322210 23888999999999999999999999999999999999995 44 799999999
Q ss_pred ccccccc---------cccccccCCCCCchhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCcH
Q 005415 570 SCFQTDN---------LCLYVQSRSYRAPEVIIG---LPYDQKIDLWSLGCILAELWTGEVLFPNDAV 625 (697)
Q Consensus 570 a~~~~~~---------~~~~~gt~~Y~APE~l~~---~~~s~ksDIWSLGviL~ELltG~~PF~~~~~ 625 (697)
+...... .....++..|+|||.+.+ ..++...|+||+|++++++++|..||.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~ 216 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN 216 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 8644332 355688999999999988 5788899999999999999999999987764
No 411
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.82 E-value=6.4e-20 Score=178.47 Aligned_cols=166 Identities=23% Similarity=0.256 Sum_probs=120.2
Q ss_pred cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCcccccccccc
Q 005415 500 ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCL 579 (697)
Q Consensus 500 gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~~~ 579 (697)
|+|.+++..... .+++..++.++.||+.||.|||+++ ||+|||++. ++.+++ ||++.......
T Consensus 1 GsL~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~--~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVRGR-----PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW--DGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC--ccceee--ccceEeecccc--
Confidence 466677654322 2899999999999999999999998 999999985 778888 99987655433
Q ss_pred ccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHhhCCCCHHHHhhcccccccccCCc
Q 005415 580 YVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAV-VMILARIIGMLGPIDLEMLMQGQEIYKYFTKEY 658 (697)
Q Consensus 580 ~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~-~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~ 658 (697)
..|++.|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+.....+....... ....+....
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 139 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRS----NLESVSAAR 139 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccc----cHHHHHhhh
Confidence 2678999999999999999999999999999999999999976543 23344443332222111000 001111112
Q ss_pred hhhhhHHHHHHHHHHHhhhhccCHHHHH--Hhhc
Q 005415 659 DLYYINEVCFANIFISLVVIRLTLEYAA--LWLF 690 (697)
Q Consensus 659 ~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~ 690 (697)
.+..++..||... |..|.+..++. +|+.
T Consensus 140 ~~~~~i~~cl~~~----p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 140 SFADFMRVCASRL----PQRREAANHYLAHCRAL 169 (176)
T ss_pred hHHHHHHHHHhcc----cccccCHHHHHHHHHHH
Confidence 5778888888765 78899998887 5543
No 412
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=1.1e-19 Score=185.39 Aligned_cols=177 Identities=15% Similarity=0.197 Sum_probs=130.3
Q ss_pred cceeeCceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchh----hhHh------HHHHHHHHHHhcccCCC
Q 005415 404 LPIILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD----FFDQ------SLDEIKLLKLVNKNDPA 473 (697)
Q Consensus 404 ~pv~~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~----~~~~------~~~Ei~iL~~L~~~~~~ 473 (697)
+.-...+++.++|+++++||.|+||.||++.+ ++..+|||+++.... .... +.+|+..+..+.
T Consensus 21 ~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~----- 93 (232)
T PRK10359 21 YKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR----- 93 (232)
T ss_pred HHHHHHHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-----
Confidence 44556788899999999999999999999765 467899999974322 1112 467888888885
Q ss_pred CCCceeEEEEEEEec--------CeEEEEEEccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccc
Q 005415 474 DEHHILRLYDYFYHL--------EHLFIVCELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIH 544 (697)
Q Consensus 474 ~hpnIv~l~~~f~~~--------~~l~LVmEyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvH 544 (697)
|++|..+.+++... ...+|||||++|. |.+... ++. ....+++.+|..||+.|++|
T Consensus 94 -~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~gi~H 158 (232)
T PRK10359 94 -SEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQHGMVS 158 (232)
T ss_pred -HCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHcCCcc
Confidence 56788887776643 3589999999974 444311 222 24569999999999999999
Q ss_pred cCCCCccccccccCcceEEEeeCCCccccccccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHH
Q 005415 545 CDLKPENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELW 614 (697)
Q Consensus 545 rDLKP~NILl~~~~~~~vKL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELl 614 (697)
||+||+||++++ ++ ++|+|||........... ..+.....|..++|+||||+++.-+.
T Consensus 159 ~Dikp~Nili~~--~g-i~liDfg~~~~~~e~~a~---------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 159 GDPHKGNFIVSK--NG-LRIIDLSGKRCTAQRKAK---------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCChHHEEEeC--CC-EEEEECCCcccccchhhH---------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999999985 55 999999987544322111 11334445667899999999987654
No 413
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.79 E-value=3.3e-20 Score=173.51 Aligned_cols=107 Identities=12% Similarity=0.031 Sum_probs=93.3
Q ss_pred cccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCC-CcceecccccCcccccccccccccccc
Q 005415 263 INNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGS-SIDWIEGFKGSSDLHFKGAEKDLMPAE 340 (697)
Q Consensus 263 ~s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tl-nP~fnE~f~f~~~v~~~~~~~~L~~~V 340 (697)
.++++|+|+|++| ||++|+..+..|||||+.|++++++.+|+||+++|+|+ ||+|||+|.|+ ++.+..+.+|.++|
T Consensus 11 p~~~rLtV~VikarnL~~~~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fd--v~~~~~~v~l~v~v 88 (135)
T cd08692 11 AVNSRIQLQILEAQNLPSSSTPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFP--VTQQEHGIQFLIKL 88 (135)
T ss_pred CcCCeEEEEEEEccCCCcccCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEe--CCchhheeEEEEEE
Confidence 4678999999999 99999878888999999999999999999999999996 59999999999 78766666699999
Q ss_pred ccCCCCCCCCcccccccCcccccccCCCCcc
Q 005415 341 IDNSDTRDGEVNGALHEGKADAEEHGVATPD 371 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~~d~e~~~~~~ 371 (697)
||+|++++|++||.+.++..+...++...|.
T Consensus 89 ~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~ 119 (135)
T cd08692 89 YSRSSVRRKHFLGQVWISSDSSSSEAVEQWK 119 (135)
T ss_pred EeCCCCcCCceEEEEEECCccCCchhhhhHH
Confidence 9999999999999999987655444444443
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=4.9e-20 Score=212.62 Aligned_cols=260 Identities=22% Similarity=0.227 Sum_probs=185.2
Q ss_pred Cce-EEEEEeccCCCCceEEEEECCCCcEEEEEEEe----cchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEec
Q 005415 414 GRY-YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIK----NDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHL 488 (697)
Q Consensus 414 ~rY-~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~----~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~ 488 (697)
..| .-.+.+|.|++|.|+.+......+..+.|..+ ..... ... ...+..++-......|||++..+..+.+.
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~--~~~-~~~i~sE~~i~~~l~h~~~~e~l~~~~~~ 393 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESE--RKY-NYNITSEFCIGSSLSHPNIIETLDIVQEI 393 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccH--HHH-hhhhhhheeecccccCCchhhhHHHHhhc
Confidence 344 35678999999999998877666666666544 11111 111 11155555555567799998887777766
Q ss_pred CeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCC
Q 005415 489 EHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLG 568 (697)
Q Consensus 489 ~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFG 568 (697)
....-+|||++.+|..++..... ++..++..+++|++.||.|||+.||.||||||+|+++.. ++.+||+|||
T Consensus 394 ~~~~~~mE~~~~Dlf~~~~~~~~------~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~--~g~lki~Dfg 465 (601)
T KOG0590|consen 394 DGILQSMEYCPYDLFSLVMSNGK------LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTE--NGILKIIDFG 465 (601)
T ss_pred ccchhhhhcccHHHHHHHhcccc------cchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEec--CCceEEeecC
Confidence 65556699999877777765422 788889999999999999999999999999999999996 7899999999
Q ss_pred Ccccccc-------ccccccccCCCCCchhhcCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCCcHHHHHH-HHHHhhCCC
Q 005415 569 SSCFQTD-------NLCLYVQSRSYRAPEVIIGLPYDQ-KIDLWSLGCILAELWTGEVLFPNDAVVMILA-RIIGMLGPI 639 (697)
Q Consensus 569 la~~~~~-------~~~~~~gt~~Y~APE~l~~~~~s~-ksDIWSLGviL~ELltG~~PF~~~~~~e~l~-~I~~~lg~~ 639 (697)
.+..... .....+|+..|+|||++.+..|.+ ..||||.|++++.|.+|+.||.-....+... .+..
T Consensus 466 ~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~----- 540 (601)
T KOG0590|consen 466 AASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY----- 540 (601)
T ss_pred cceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc-----
Confidence 8754322 123468899999999999999886 4999999999999999999996543332211 1000
Q ss_pred CHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH--HhhcccC
Q 005415 640 DLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA--LWLFGID 693 (697)
Q Consensus 640 p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~--~wl~~~~ 693 (697)
.........++.-...|..-.+...-.++..-|..|.|+++++ .|+..++
T Consensus 541 ----~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 541 ----SDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred ----ccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 0000111111122224445556667777778899999999999 9998664
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=6.4e-19 Score=175.78 Aligned_cols=139 Identities=17% Similarity=0.225 Sum_probs=103.3
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEEecchhh---------------------------hHhHHHHHHHHHHhcccC
Q 005415 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF---------------------------FDQSLDEIKLLKLVNKND 471 (697)
Q Consensus 419 ~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~---------------------------~~~~~~Ei~iL~~L~~~~ 471 (697)
.+.||+|++|.||+|.+. +|+.||||+++..... ......|++++..+....
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999986 8999999999754210 012234889999987532
Q ss_pred CCCCCceeEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHH-HhcCccccCCCCc
Q 005415 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYL-HSLGIIHCDLKPE 550 (697)
Q Consensus 472 ~~~hpnIv~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yL-Hs~gIvHrDLKP~ 550 (697)
..+|+++. . ...+|||||++++.+....... ..++...+..++.|++.+|.+| |+.||+||||||+
T Consensus 81 -v~~p~~~~------~-~~~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~ 147 (190)
T cd05147 81 -IPCPEPIL------L-KSHVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQDCRLVHADLSEY 147 (190)
T ss_pred -CCCCcEEE------e-cCCEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence 23344431 1 1238999999976433221111 1278899999999999999999 7999999999999
Q ss_pred cccccccCcceEEEeeCCCccccc
Q 005415 551 NILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 551 NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
|||++ ++.++|+|||+|....
T Consensus 148 NIli~---~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 148 NLLYH---DGKLYIIDVSQSVEHD 168 (190)
T ss_pred HEEEE---CCcEEEEEccccccCC
Confidence 99998 4679999999986543
No 416
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.78 E-value=1.1e-19 Score=168.88 Aligned_cols=100 Identities=14% Similarity=0.053 Sum_probs=90.5
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCc-cccceeecccCCCcceecccccCcccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTE-KSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~-~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V 340 (697)
..+.|+|+|++| ||+++|.+|.+|||||++|+|++++. .++||+++++|+||+|||+|.|. ++.+++ +++|.++|
T Consensus 12 ~~~~L~V~V~~arnL~~~~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~--v~~~~L~~~~L~~~V 89 (124)
T cd08680 12 GDSSLVISVEQLRNLSALSIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVP--ISSTKLYQKTLQVDV 89 (124)
T ss_pred CCCEEEEEEeEecCCcccccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEE--CCHHHhhcCEEEEEE
Confidence 567899999999 99999999999999999999999763 68999999999999999999999 888888 56799999
Q ss_pred ccCCCCCCCCcccccccCccccccc
Q 005415 341 IDNSDTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~~d~e 365 (697)
||++++++++++|+++++-.+.+..
T Consensus 90 ~~~~~~~~~~~lG~~~i~L~~~~~~ 114 (124)
T cd08680 90 CSVGPDQQEECLGGAQISLADFESS 114 (124)
T ss_pred EeCCCCCceeEEEEEEEEhhhccCC
Confidence 9999999999999999877666443
No 417
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.77 E-value=2e-19 Score=170.02 Aligned_cols=95 Identities=14% Similarity=0.008 Sum_probs=87.3
Q ss_pred ccceeEEEEecc-CcccccCC--CCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHN--VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPA 339 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~--g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~ 339 (697)
++++|+|+|++| ||.++|.+ +.+|||||++|+|+.++.+|+||+++++|+||+|||+|.|+ ++.+.+ +.+|.++
T Consensus 13 ~~~~L~V~V~karnL~~~d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~--v~~~~L~~~~L~~~ 90 (138)
T cd08407 13 AANRLLVVVIKAKNLHSDQLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFE--LPSELLAASSVELE 90 (138)
T ss_pred CCCeEEEEEEEecCCCccccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEE--CCHHHhCccEEEEE
Confidence 668899999999 99999954 55899999999999988899999999999999999999999 998888 5559999
Q ss_pred cccCCCCCCCCcccccccCcc
Q 005415 340 EIDNSDTRDGEVNGALHEGKA 360 (697)
Q Consensus 340 V~D~d~~~~~d~~G~v~~~~~ 360 (697)
|||+|++++++++|++.++..
T Consensus 91 V~d~d~~~~~d~iG~v~lg~~ 111 (138)
T cd08407 91 VLNQDSPGQSLPLGRCSLGLH 111 (138)
T ss_pred EEeCCCCcCcceeceEEecCc
Confidence 999999999999999999874
No 418
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.76 E-value=3.4e-19 Score=168.25 Aligned_cols=95 Identities=12% Similarity=-0.003 Sum_probs=88.2
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
..++|+|.|++| ||.++|.+|.+|||||++|+|++++.+|+||+++|+|+||+|||+|.|. ++.+.+ +.+|.++||
T Consensus 13 ~~~~L~V~Vi~A~nL~~~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~--v~~~~l~~~~l~~~V~ 90 (136)
T cd08406 13 TAERLTVVVVKARNLVWDNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFS--VPAIVLQDLSLRVTVA 90 (136)
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEE--CCHHHhCCcEEEEEEE
Confidence 567899999999 9999999999999999999999988889999999999999999999999 888777 555999999
Q ss_pred cCCCCCCCCcccccccCcc
Q 005415 342 DNSDTRDGEVNGALHEGKA 360 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~ 360 (697)
|+|++++++++|.+.++..
T Consensus 91 ~~d~~~~~~~iG~v~lg~~ 109 (136)
T cd08406 91 ESTEDGKTPNVGHVIIGPA 109 (136)
T ss_pred eCCCCCCCCeeEEEEECCC
Confidence 9999999999999988764
No 419
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=3.9e-18 Score=201.28 Aligned_cols=201 Identities=19% Similarity=0.283 Sum_probs=157.3
Q ss_pred eeeCceecCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 406 IILNTVIAGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 406 v~~~~~i~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
.....+-+..|.|.+.||.|+||+||+|.+.. |+.||||+-+....+. +---.+++.+|+- .--+-|..+...+
T Consensus 690 ~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE--fYI~~q~~~RLk~---~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 690 NTEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE--FYICLQVMERLKP---QMLPSIMHISSAH 763 (974)
T ss_pred cceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee--eeehHHHHHhhch---hhhcchHHHHHHH
Confidence 33344456789999999999999999999765 9999999988765432 1112223333330 0123567777777
Q ss_pred EecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccc-----cCc
Q 005415 486 YHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKS-----YQR 559 (697)
Q Consensus 486 ~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~-----~~~ 559 (697)
...+.-+||+||.+ |+|++++.. ...+++..++.++.||+..+.+||..+||||||||+|+||.. .+.
T Consensus 764 ~~~~~S~lv~ey~~~Gtlld~~N~------~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~ 837 (974)
T KOG1166|consen 764 VFQNASVLVSEYSPYGTLLDLINT------NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDS 837 (974)
T ss_pred ccCCcceeeeeccccccHHHhhcc------CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcc
Confidence 77788899999998 788888872 233889999999999999999999999999999999999963 234
Q ss_pred ceEEEeeCCCccccc---c--ccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCC
Q 005415 560 CEIKIIDLGSSCFQT---D--NLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEV 618 (697)
Q Consensus 560 ~~vKL~DFGla~~~~---~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~ 618 (697)
..++|+|||.+..+. + ......+|-.+-.+|+..|.+|++.+|.|.|+.+++-||.|+.
T Consensus 838 ~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 838 KGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 568999999885432 1 2344677888999999999999999999999999999999963
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.75 E-value=8.9e-18 Score=167.22 Aligned_cols=140 Identities=18% Similarity=0.211 Sum_probs=102.3
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEEecchhh---------------------------hHhHHHHHHHHHHhcccC
Q 005415 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF---------------------------FDQSLDEIKLLKLVNKND 471 (697)
Q Consensus 419 ~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~---------------------------~~~~~~Ei~iL~~L~~~~ 471 (697)
.+.||+|++|.||+|.+. +|+.||||+++..... ......|...+..+.+.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~- 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA- 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 468999999999999976 8999999999864210 11224677778777643
Q ss_pred CCCCCceeEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCc
Q 005415 472 PADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPE 550 (697)
Q Consensus 472 ~~~hpnIv~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~ 550 (697)
++.....+... ..++||||+++.......... ..++...+..++.|++.+|.+||+ .||+||||||+
T Consensus 80 -----~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~ 147 (190)
T cd05145 80 -----GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEY 147 (190)
T ss_pred -----CCCCceEEEec--CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChh
Confidence 33222222222 248999999876222111111 126778899999999999999999 99999999999
Q ss_pred cccccccCcceEEEeeCCCcccccc
Q 005415 551 NILIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 551 NILl~~~~~~~vKL~DFGla~~~~~ 575 (697)
|||++ ++.++|+|||++.....
T Consensus 148 NIll~---~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 148 NILYH---DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hEEEE---CCCEEEEEcccceecCC
Confidence 99998 57899999999876543
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.75 E-value=1.3e-17 Score=175.02 Aligned_cols=206 Identities=22% Similarity=0.333 Sum_probs=131.5
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch----hhhHhHHHHHHHHHHhccc-CC---CCCCceeEEEEEEE-
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK----DFFDQSLDEIKLLKLVNKN-DP---ADEHHILRLYDYFY- 486 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~----~~~~~~~~Ei~iL~~L~~~-~~---~~hpnIv~l~~~f~- 486 (697)
+...+.||.|+++.||.+.|..+++.+|||++.... ...+++.+|.-....+... ++ ..|-.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 556788999999999999999999999999986432 1223333333222221110 00 00112222222222
Q ss_pred --------ec---C-----eEEEEEEccccchHHHHHhhhccCC-CcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCC
Q 005415 487 --------HL---E-----HLFIVCELLRANLYEFQKFNQESGG-EAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKP 549 (697)
Q Consensus 487 --------~~---~-----~l~LVmEyl~gsL~~~l~~~~~~~~-~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP 549 (697)
.. . ..+++|+-+.++|..++........ ...+.......+..|+++.+++||..||||+||+|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~ 173 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKP 173 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SG
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccce
Confidence 11 1 2478899999998888664332221 11233344456779999999999999999999999
Q ss_pred ccccccccCcceEEEeeCCCccccccccccccccCCCCCchhhcCC--------CCCchhhHHHHHHHHHHHHhCCCCCC
Q 005415 550 ENILIKSYQRCEIKIIDLGSSCFQTDNLCLYVQSRSYRAPEVIIGL--------PYDQKIDLWSLGCILAELWTGEVLFP 621 (697)
Q Consensus 550 ~NILl~~~~~~~vKL~DFGla~~~~~~~~~~~gt~~Y~APE~l~~~--------~~s~ksDIWSLGviL~ELltG~~PF~ 621 (697)
+|++++. +|.++|+||+.....+........+..|.+||..... .++.+.|.|+||++||.|++|..||.
T Consensus 174 ~nfll~~--~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 174 ENFLLDQ--DGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp GGEEE-T--TS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred eeEEEcC--CCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 9999996 8999999999877666554444556789999987432 47889999999999999999999997
Q ss_pred CC
Q 005415 622 ND 623 (697)
Q Consensus 622 ~~ 623 (697)
..
T Consensus 252 ~~ 253 (288)
T PF14531_consen 252 LS 253 (288)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 422
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.74 E-value=1.1e-18 Score=166.37 Aligned_cols=97 Identities=9% Similarity=-0.043 Sum_probs=86.3
Q ss_pred ccceeEEEEecc-Cccccc-CCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d-~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~ 341 (697)
..+.|+|.|++| ||.++| .+|.+|||||++|+|++++..|+||+++|+|+||+|||+|.|. +. ..+++|.++||
T Consensus 27 ~~~~L~V~Vi~ArnL~~~~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~--v~--l~~~~L~v~V~ 102 (146)
T cd04028 27 KKGQLEVEVIRARGLVQKPGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFD--VS--PTGKTLQVIVW 102 (146)
T ss_pred CCCEEEEEEEEeeCCCcccCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEE--Ec--CCCCEEEEEEE
Confidence 357899999999 999985 6889999999999999998889999999999999999999999 66 34667999999
Q ss_pred -cCCCCCCCCcccccccCcccccc
Q 005415 342 -DNSDTRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 342 -D~d~~~~~d~~G~v~~~~~~~d~ 364 (697)
|++++++++++|++.+.-...+-
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~ 126 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDL 126 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccC
Confidence 79999999999999887766643
No 423
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.74 E-value=1.4e-18 Score=162.44 Aligned_cols=100 Identities=11% Similarity=-0.011 Sum_probs=90.8
Q ss_pred ccceeEEEEecc-CcccccCC-CCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~-g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V 340 (697)
..+.|+|.|++| ||.++|.+ |.+|||||++|+|++++..|+||+++++|+||+|||+|.|. ++.+.+ +++|.++|
T Consensus 13 ~~~~L~V~V~~a~nL~~~d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~--v~~~~l~~~~L~v~V 90 (128)
T cd08392 13 RTSCLEITIKACRNLAYGDEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYV--VEADLLSSRQLQVSV 90 (128)
T ss_pred CCCEEEEEEEecCCCCccCCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEE--cCHHHhCCcEEEEEE
Confidence 467999999999 99999986 99999999999999988889999999999999999999999 888777 56799999
Q ss_pred ccCCCCCCCCcccccccCccccccc
Q 005415 341 IDNSDTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~~d~e 365 (697)
||++.+++++++|+++++..+.+-.
T Consensus 91 ~~~~~~~~~~~lG~~~i~L~~~~~~ 115 (128)
T cd08392 91 WHSRTLKRRVFLGEVLIPLADWDFE 115 (128)
T ss_pred EeCCCCcCcceEEEEEEEcCCcccC
Confidence 9999999999999999987666544
No 424
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=3.7e-17 Score=164.06 Aligned_cols=183 Identities=17% Similarity=0.122 Sum_probs=137.6
Q ss_pred EEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhH-----hHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 417 YVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFD-----QSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 417 ~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~-----~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
.+...|++|+||+|+++.. .+.+++.+.+.....+.. .+.+|+++|+.|.+ +++|++++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~-----~~~vP~ll~~----~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDG-----LPRTPRLLHW----DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCC-----CCCCCEEEEE----cCE
Confidence 3567899999999998864 788888888876654333 56789999999964 4678888775 456
Q ss_pred EEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCC-CCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDL-KPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDL-KP~NILl~~~~~~~vKL~DFGla 570 (697)
+++|||+.|..+.... ... ...++.|++.+|.++|++||+|||| ||.|||++. ++.++|+|||++
T Consensus 74 ~lvmeyI~G~~L~~~~-----------~~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~--~g~i~LIDFG~A 139 (218)
T PRK12274 74 HLDRSYLAGAAMYQRP-----------PRG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE--DGSPAVIDFQLA 139 (218)
T ss_pred EEEEeeecCccHHhhh-----------hhh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC--CCCEEEEECCCc
Confidence 9999999876442111 011 1347789999999999999999999 799999985 778999999999
Q ss_pred cccccccc----------------cccccCCCCCchhhcCC-CCC-chhhHHHHHHHHHHHHhCCCCCCCCc
Q 005415 571 CFQTDNLC----------------LYVQSRSYRAPEVIIGL-PYD-QKIDLWSLGCILAELWTGEVLFPNDA 624 (697)
Q Consensus 571 ~~~~~~~~----------------~~~gt~~Y~APE~l~~~-~~s-~ksDIWSLGviL~ELltG~~PF~~~~ 624 (697)
........ ....++.|++|+...-. ..+ ...+.++.|+-+|.++|+..|+.++.
T Consensus 140 ~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 140 VRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred eecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 75443221 02347788888765432 233 56788999999999999999986553
No 425
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.73 E-value=1.7e-18 Score=192.76 Aligned_cols=204 Identities=26% Similarity=0.345 Sum_probs=161.9
Q ss_pred eccCCCCceEEEEE---CCCCcEEEEEEEecchh---hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEE
Q 005415 422 LGSAAFSKVFQAQD---LHTGVDVCLKIIKNDKD---FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVC 495 (697)
Q Consensus 422 LG~G~fG~Vy~a~d---~~~g~~VAVKii~~~~~---~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVm 495 (697)
+|.|+||.|+++.- ...+..+|+|+.++... .......|..++..++ .||.++++.-.|+....+++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~-----~~~f~v~lhyafqt~~kl~l~l 76 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH-----NTPFLVKLHYAFQTDGKLYLIL 76 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc-----CCCceeeeeeeeccccchhHhh
Confidence 79999999998853 23567789998875321 1114445666777665 3789999999999999999999
Q ss_pred Eccccc-hHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccccc
Q 005415 496 ELLRAN-LYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCFQT 574 (697)
Q Consensus 496 Eyl~gs-L~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~~~ 574 (697)
++..++ +...+... ..+.+.....+...++-|++++|+.+|+|||+|++||+++. +|++++.|||+++..-
T Consensus 77 d~~rgg~lft~l~~~------~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~--~Ghi~~tdfglske~v 148 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKE------VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLL--EGHIKLTDFGLSKEAV 148 (612)
T ss_pred hhcccchhhhccccC------CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecc--cCccccCCchhhhHhH
Confidence 999864 33332222 22777788888999999999999999999999999999996 9999999999997765
Q ss_pred cccccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhhCCCCHHHHh
Q 005415 575 DNLCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIGMLGPIDLEMLM 645 (697)
Q Consensus 575 ~~~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~~lg~~p~e~~~ 645 (697)
..... +|+..|||||++. +....+|.||||++++||+||..||.+ +...+|.+..-..|.+++.
T Consensus 149 ~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~ 212 (612)
T KOG0603|consen 149 KEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSA 212 (612)
T ss_pred hhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhH
Confidence 44433 8999999999998 567889999999999999999999987 6777777655566665544
No 426
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.72 E-value=3.3e-18 Score=158.57 Aligned_cols=98 Identities=12% Similarity=0.053 Sum_probs=87.9
Q ss_pred cceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccc-ccccc-ccccccccc
Q 005415 265 NDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDL-HFKGA-EKDLMPAEI 341 (697)
Q Consensus 265 ~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v-~~~~~-~~~L~~~V~ 341 (697)
.+.|+|.|++| ||+++| +|.+|||||++|+|+.++..++||+++++++||+|||+|.|. + +.+.+ +.+|.++||
T Consensus 12 ~~~L~V~Vi~A~~L~~~~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~--~~~~~~l~~~~L~~~V~ 88 (122)
T cd08381 12 NGTLFVMVMHAKNLPLLD-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYD--GLPVEDLQQRVLQVSVW 88 (122)
T ss_pred CCEEEEEEEEeeCCCCCC-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEe--cCChHHhCCCEEEEEEE
Confidence 57899999999 999999 999999999999999888889999999999999999999998 5 55555 566999999
Q ss_pred cCCCCCCCCcccccccCccccccc
Q 005415 342 DNSDTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d~e 365 (697)
|+|++++++++|++.++..++...
T Consensus 89 d~d~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 89 SHDSLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred eCCCCcCCcEEEEEEEeccccccC
Confidence 999999999999999887666543
No 427
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.71 E-value=3.6e-18 Score=157.68 Aligned_cols=98 Identities=16% Similarity=0.113 Sum_probs=88.4
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccccccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 342 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D 342 (697)
..++|+|.|++| ||.++| +|.+|||||++|+|++++..++||+++++|+||+|||+|.|. ++.+..++.|.++|||
T Consensus 10 ~~~~L~V~Vi~ar~L~~~~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~--v~~~~~~~~l~v~V~~ 86 (119)
T cd08685 10 QNRKLTLHVLEAKGLRSTN-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFD--VNERDYQKRLLVTVWN 86 (119)
T ss_pred cCCEEEEEEEEEECCCCCC-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEE--cChHHhCCEEEEEEEC
Confidence 457899999999 999999 899999999999999988889999999999999999999998 7777776678999999
Q ss_pred CCCCC-CCCcccccccCcccccc
Q 005415 343 NSDTR-DGEVNGALHEGKADAEE 364 (697)
Q Consensus 343 ~d~~~-~~d~~G~v~~~~~~~d~ 364 (697)
.+... +++++|+++++..+...
T Consensus 87 ~~~~~~~~~~lG~~~i~l~~~~~ 109 (119)
T cd08685 87 KLSKSRDSGLLGCMSFGVKSIVN 109 (119)
T ss_pred CCCCcCCCEEEEEEEecHHHhcc
Confidence 99987 47999999998877753
No 428
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.71 E-value=5.4e-18 Score=157.80 Aligned_cols=100 Identities=10% Similarity=-0.006 Sum_probs=89.8
Q ss_pred ccceeEEEEecc-CcccccCC-CCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~-g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V 340 (697)
..+.|+|.|++| ||+++|.+ |.+|||||++|+|++++..++||+++++|+||+|||+|.|. ++.+.+ +++|.++|
T Consensus 13 ~~~~L~V~vi~a~~L~~~d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~--v~~~~l~~~~L~~~V 90 (125)
T cd08393 13 KLRELHVHVIQCQDLAAADPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYK--VEREELPTRVLNLSV 90 (125)
T ss_pred CCCEEEEEEEEeCCCCCcCCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEE--CCHHHhCCCEEEEEE
Confidence 457899999999 99999986 89999999999999988788999999999999999999999 887766 46699999
Q ss_pred ccCCCCCCCCcccccccCccccccc
Q 005415 341 IDNSDTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~~d~e 365 (697)
||+|++++++++|++.++..+.+..
T Consensus 91 ~d~~~~~~~~~iG~~~i~L~~~~~~ 115 (125)
T cd08393 91 WHRDSLGRNSFLGEVEVDLGSWDWS 115 (125)
T ss_pred EeCCCCCCCcEeEEEEEecCccccC
Confidence 9999999999999999887666543
No 429
>PRK10345 hypothetical protein; Provisional
Probab=99.70 E-value=1.9e-16 Score=160.37 Aligned_cols=139 Identities=21% Similarity=0.232 Sum_probs=106.8
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEEecc-hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC---e-EEE
Q 005415 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND-KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE---H-LFI 493 (697)
Q Consensus 419 ~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~-~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~---~-l~L 493 (697)
.+.||+|+||.||. ++.++.. +||++... ....+...+|+++++.+.+ ...+||||+++++++.+.. . ..+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~-~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSR-RLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhc-cCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 46799999999996 6777666 69988753 2344678999999999976 3467999999999999863 3 347
Q ss_pred EEEccc---cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHH-HHHHhcCccccCCCCcccccccc--CcceEEEeeC
Q 005415 494 VCELLR---ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEAL-EYLHSLGIIHCDLKPENILIKSY--QRCEIKIIDL 567 (697)
Q Consensus 494 VmEyl~---gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL-~yLHs~gIvHrDLKP~NILl~~~--~~~~vKL~DF 567 (697)
||||.+ ++|.+++.... +++. ..++.|++.++ .|||+++|+||||||+|||++.. ....++|+||
T Consensus 83 I~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 899954 58888875321 4444 35678888777 89999999999999999999742 2347999995
Q ss_pred CCc
Q 005415 568 GSS 570 (697)
Q Consensus 568 Gla 570 (697)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 433
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.69 E-value=7.4e-17 Score=187.33 Aligned_cols=180 Identities=27% Similarity=0.375 Sum_probs=134.2
Q ss_pred cCceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEE
Q 005415 413 AGRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLF 492 (697)
Q Consensus 413 ~~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~ 492 (697)
...|..+++|-.|++|.||+++++.+.+.+|+|+-+..- |++. +....+.|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l-----------ilRn--ilt~a~npfvv------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL-----------ILRN--ILTFAGNPFVV------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch-----------hhhc--cccccCCccee-------------
Confidence 467999999999999999999999999999996543221 1111 00011122222
Q ss_pred EEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 493 IVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 493 LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
|+-..+++.... ++. +++.+++|||+.||+|||+||+|.+|+. -|++|++|||++..
T Consensus 136 -------gDc~tllk~~g~------lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~--mGhiKlTDfgLsk~ 192 (1205)
T KOG0606|consen 136 -------GDCATLLKNIGP------LPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITS--MGHIKLTDFGLSKK 192 (1205)
T ss_pred -------chhhhhcccCCC------Ccc--------hhhHHhHhhccCCeecCCCCCCcceeee--cccccccchhhhhh
Confidence 222222221111 222 2277999999999999999999999996 89999999998754
Q ss_pred cccc------------------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Q 005415 573 QTDN------------------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWTGEVLFPNDAVVMILARIIG 634 (697)
Q Consensus 573 ~~~~------------------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~~ 634 (697)
.... ....+||+.|+|||++..++|+..+|.|++|+|+||.+.|..||-++.+++++..++.
T Consensus 193 GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vis 272 (1205)
T KOG0606|consen 193 GLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS 272 (1205)
T ss_pred hhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhh
Confidence 2111 1225889999999999999999999999999999999999999999999999999887
Q ss_pred hhCCCCH
Q 005415 635 MLGPIDL 641 (697)
Q Consensus 635 ~lg~~p~ 641 (697)
.....|.
T Consensus 273 d~i~wpE 279 (1205)
T KOG0606|consen 273 DDIEWPE 279 (1205)
T ss_pred hhccccc
Confidence 6554443
No 431
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.68 E-value=2.8e-17 Score=190.71 Aligned_cols=190 Identities=32% Similarity=0.467 Sum_probs=146.2
Q ss_pred ceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecch-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecC
Q 005415 415 RYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLE 489 (697)
Q Consensus 415 rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~-----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~ 489 (697)
.|...+.||++.|=+|.+|++ ..|. |+||++-+.. ....+.+.|++ .. ...+||++.+.-+.....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~-~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik---~~----l~~~pn~lPfqk~~~t~k 94 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKD-REGL-VVVKVFVKQDPTISLRPFKQRLEEIK---FA----LMKAPNCLPFQKVLVTDK 94 (1431)
T ss_pred ceeeecccCchhhhhhhhccC-CCce-EEEEEEeccCCCCCchHHHHHHHHHH---HH----hhcCCcccchHHHHHhhH
Confidence 678899999999999999986 3455 8999986532 12233334444 11 124789999888877778
Q ss_pred eEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 490 HLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 490 ~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
..|||-+|+..+|++.+..++. +...+.+.|+-||+.||.-+|..||+|||||.+||||++ .+-+.|+||..
T Consensus 95 AAylvRqyvkhnLyDRlSTRPF------L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS--WNW~~LtDFAs 166 (1431)
T KOG1240|consen 95 AAYLVRQYVKHNLYDRLSTRPF------LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS--WNWLYLTDFAS 166 (1431)
T ss_pred HHHHHHHHHhhhhhhhhccchH------HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee--echhhhhcccc
Confidence 8899999999999998875544 778889999999999999999999999999999999997 66789999986
Q ss_pred ccc---ccccc---cccccc----CCCCCchhhcCC----------C-CCchhhHHHHHHHHHHHHh-CCCCCC
Q 005415 570 SCF---QTDNL---CLYVQS----RSYRAPEVIIGL----------P-YDQKIDLWSLGCILAELWT-GEVLFP 621 (697)
Q Consensus 570 a~~---~~~~~---~~~~gt----~~Y~APE~l~~~----------~-~s~ksDIWSLGviL~ELlt-G~~PF~ 621 (697)
-+. ..++. ..+..| ..|.|||.+... . .+++.||||+||+++||++ |++||.
T Consensus 167 FKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~ 240 (1431)
T KOG1240|consen 167 FKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT 240 (1431)
T ss_pred cCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence 422 11221 112222 349999988531 2 5778999999999999999 899994
No 432
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.68 E-value=9e-18 Score=159.02 Aligned_cols=95 Identities=16% Similarity=0.098 Sum_probs=85.9
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCC-CccccceeecccCCCcceecccccCcccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPG-TEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~-~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V 340 (697)
..++|.|+|++| ||.++|.+|..|||||++|+|+.+ +..|+||+++++++||+|||+|.|. ++.+.+ +++|.++|
T Consensus 13 ~~~~L~V~VikarnL~~~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~--i~~~~l~~~~L~~~V 90 (138)
T cd08408 13 LTGRLSVEVIKGSNFKNLAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQ--VALFQLSEVTLMFSV 90 (138)
T ss_pred CCCeEEEEEEEecCCCccccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEE--CCHHHhCccEEEEEE
Confidence 568999999999 999999999999999999999654 4568899999999999999999999 888877 56699999
Q ss_pred ccCCCCCCCCcccccccCcc
Q 005415 341 IDNSDTRDGEVNGALHEGKA 360 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~ 360 (697)
||++++++++++|++.++..
T Consensus 91 ~~~~~~~~~~~iG~v~l~~~ 110 (138)
T cd08408 91 YNKRKMKRKEMIGWFSLGLN 110 (138)
T ss_pred EECCCCCCCcEEEEEEECCc
Confidence 99999999999999988654
No 433
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.68 E-value=2.9e-17 Score=152.94 Aligned_cols=101 Identities=11% Similarity=0.019 Sum_probs=89.7
Q ss_pred ccceeEEEEecc-CcccccC-CCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQH-NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~-~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V 340 (697)
..+.|+|.|++| ||.++|. +|.+|||||++++|++.+..++||+++++|+||+|||+|.|. ++.+.+ ++.|.++|
T Consensus 13 ~~~~L~V~Vi~a~~L~~~~~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~--i~~~~l~~~~L~~~V 90 (125)
T cd04029 13 KTQSLNVHVKECRNLAYGDEAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYS--ISHSQLETRTLQLSV 90 (125)
T ss_pred CCCeEEEEEEEecCCCccCCCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEE--CCHHHhCCCEEEEEE
Confidence 567899999999 9999986 589999999999999987788999999999999999999999 887766 55699999
Q ss_pred ccCCCCCCCCcccccccCcccccccC
Q 005415 341 IDNSDTRDGEVNGALHEGKADAEEHG 366 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~~d~e~ 366 (697)
||+|.+++++++|++.++....+-..
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~~~~ 116 (125)
T cd04029 91 WHYDRFGRNTFLGEVEIPLDSWNFDS 116 (125)
T ss_pred EECCCCCCCcEEEEEEEeCCcccccC
Confidence 99999999999999998876665543
No 434
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=2.2e-16 Score=162.97 Aligned_cols=144 Identities=16% Similarity=0.158 Sum_probs=107.9
Q ss_pred eEEEEEeccCCCCceEEEE-ECCCCcEEEEEEEecchh-------------------------hhHhHHHHHHHHHHhcc
Q 005415 416 YYVTEYLGSAAFSKVFQAQ-DLHTGVDVCLKIIKNDKD-------------------------FFDQSLDEIKLLKLVNK 469 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~-d~~~g~~VAVKii~~~~~-------------------------~~~~~~~Ei~iL~~L~~ 469 (697)
|.+.+.||.|++|.||+|. +..+|+.||||+++.... .......|+.+++.+..
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 7889999999999999998 678999999999875321 01224579999999864
Q ss_pred cCCCCCCceeEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcC-ccccCCC
Q 005415 470 NDPADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG-IIHCDLK 548 (697)
Q Consensus 470 ~~~~~hpnIv~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~g-IvHrDLK 548 (697)
. ...+.+++.. ...++||||+++..+....... ..+....+..++.||+.+|.+||+.| |+|||||
T Consensus 110 ~----~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dik 176 (237)
T smart00090 110 A----GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLS 176 (237)
T ss_pred c----CCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCC
Confidence 2 2234444443 2348999999985433221111 12556667889999999999999999 9999999
Q ss_pred CccccccccCcceEEEeeCCCcccccc
Q 005415 549 PENILIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 549 P~NILl~~~~~~~vKL~DFGla~~~~~ 575 (697)
|+||+++ ++.++|+|||.+.....
T Consensus 177 p~NIli~---~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 177 EYNILVH---DGKVVIIDVSQSVELDH 200 (237)
T ss_pred hhhEEEE---CCCEEEEEChhhhccCC
Confidence 9999998 57899999998865443
No 435
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.64 E-value=1.2e-16 Score=147.45 Aligned_cols=97 Identities=16% Similarity=0.045 Sum_probs=80.7
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccC--CCCCccccceeecccCCCcceecccccCcccccc-cc-ccccccccc
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAP--HPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFK-GA-EKDLMPAEI 341 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~p--d~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~-~~-~~~L~~~V~ 341 (697)
+|+|+|.+| +|+++| .|.+|||||++|.- ...+++|++|+++++|+||+|||+|.|. ++.+ .. ..+|.+.||
T Consensus 1 kL~V~Vi~A~~L~~~d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~--v~~~~~~~~~~L~~~V~ 77 (120)
T cd08395 1 KVTVKVVAANDLKWQT-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFI--LGNEDDPESYELHICVK 77 (120)
T ss_pred CEEEEEEECcCCCccc-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEE--eeCcCCCceeEEEEEEE
Confidence 589999999 999998 49999999999962 2334447899999999999999999999 7654 34 455999999
Q ss_pred cCCCCCCCCcccccccCcccccccC
Q 005415 342 DNSDTRDGEVNGALHEGKADAEEHG 366 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d~e~ 366 (697)
|+|.+++++++|.+.++.......+
T Consensus 78 D~d~~~~dd~IG~~~l~l~~~~~~~ 102 (120)
T cd08395 78 DYCFARDDRLVGVTVLQLRDIAQAG 102 (120)
T ss_pred EecccCCCCEEEEEEEEHHHCcCCC
Confidence 9998888999999988876666544
No 436
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.62 E-value=1.1e-15 Score=161.73 Aligned_cols=144 Identities=26% Similarity=0.374 Sum_probs=113.7
Q ss_pred CCCCceeEEEEEEEe---------------------------cCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHH
Q 005415 473 ADEHHILRLYDYFYH---------------------------LEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQV 525 (697)
Q Consensus 473 ~~hpnIv~l~~~f~~---------------------------~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~ 525 (697)
..|||||+++.+|.+ ...+|+||.....+|.+++-.+. .+......
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~-------~s~r~~~~ 345 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH-------RSYRTGRV 345 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC-------CchHHHHH
Confidence 579999999988853 23589999999999999987554 45567778
Q ss_pred HHHHHHHHHHHHHhcCccccCCCCccccccccCc--ceEEEeeCCCcccccc---------ccccccccCCCCCchhhcC
Q 005415 526 ITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR--CEIKIIDLGSSCFQTD---------NLCLYVQSRSYRAPEVIIG 594 (697)
Q Consensus 526 i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~--~~vKL~DFGla~~~~~---------~~~~~~gt~~Y~APE~l~~ 594 (697)
++.|+++|+.|||++||.|||+|.+|||+.-+++ ..++|+|||++--... ......|.-..||||+...
T Consensus 346 ~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999999999999999999999964333 4678999998743221 1122345666899999864
Q ss_pred CC------CCchhhHHHHHHHHHHHHhCCCCCCCC
Q 005415 595 LP------YDQKIDLWSLGCILAELWTGEVLFPND 623 (697)
Q Consensus 595 ~~------~s~ksDIWSLGviL~ELltG~~PF~~~ 623 (697)
.+ --.|+|.|+.|.+.||+++..-||.+.
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~r 460 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKR 460 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCccccc
Confidence 32 124799999999999999999999763
No 437
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.62 E-value=2.3e-16 Score=174.93 Aligned_cols=97 Identities=11% Similarity=0.047 Sum_probs=87.2
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
....|+|.|++| +|+++|..|.+|||||++|+||++. |.||+++|+|+||+|||+|.|. |+.+++ .++|.++||
T Consensus 165 ~~~~L~V~V~qa~~Lp~~d~~g~sdpyVK~~llPdk~~--k~kT~v~r~tlnP~fnEtf~f~--v~~~~l~~~~L~l~V~ 240 (421)
T KOG1028|consen 165 ELNLLTVRVIQAHDLPAKDRGGTSDPYVKVYLLPDKKG--KFKTRVHRKTLNPVFNETFRFE--VPYEELSNRVLHLSVY 240 (421)
T ss_pred cCCEEEEEEEEecCCCcccCCCCCCCeeEEEEcCCCCC--cceeeeeecCcCCccccceEee--cCHHHhccCEEEEEEE
Confidence 557899999999 9999998889999999999999944 9999999999999999999999 777766 778999999
Q ss_pred cCCCCCCCCcccccccCcccccc
Q 005415 342 DNSDTRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d~ 364 (697)
|+|+|++++++|++.++-...+.
T Consensus 241 ~~drfsr~~~iGev~~~l~~~~~ 263 (421)
T KOG1028|consen 241 DFDRFSRHDFIGEVILPLGEVDL 263 (421)
T ss_pred ecCCcccccEEEEEEecCccccc
Confidence 99999999999999887434433
No 438
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.60 E-value=7.5e-16 Score=149.83 Aligned_cols=119 Identities=18% Similarity=0.201 Sum_probs=99.2
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
+.+.|+|.|.+| ||+++|..|.+|||||++++++..+..++||+++++|+||.|||+|.|.. ++.+.+ +..|.++||
T Consensus 25 ~~g~L~V~Vi~A~nL~~~d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~-~~~~~l~~~~L~i~V~ 103 (162)
T cd04020 25 STGELHVWVKEAKNLPALKSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDG-VSPEDLSQACLELTVW 103 (162)
T ss_pred CCceEEEEEEeeeCCCCCCCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEec-CCHHHhCCCEEEEEEE
Confidence 668899999999 99999999999999999999998777899999999999999999999983 333444 556999999
Q ss_pred cCCCCCCCCcccccccCcccccccCCCCcccccchhhHhHhhhhh
Q 005415 342 DNSDTRDGEVNGALHEGKADAEEHGVATPDLLMFDNLEEECEIFH 386 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d~e~~~~~~~l~~~~l~ee~e~~~ 386 (697)
|+|.+++++++|++.++..+....+.. ..|++...+|..+++
T Consensus 104 d~d~~~~d~~lG~v~i~l~~~~~~~~~---~~w~~~~~~~~~~w~ 145 (162)
T cd04020 104 DHDKLSSNDFLGGVRLGLGTGKSYGQA---VDWMDSTGEEILLWQ 145 (162)
T ss_pred eCCCCCCCceEEEEEEeCCccccCCCc---cccccCChHHHHHHH
Confidence 999999999999999988777665532 336666666666653
No 439
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.60 E-value=3.5e-16 Score=148.02 Aligned_cols=93 Identities=14% Similarity=0.107 Sum_probs=85.1
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAE-KDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~-~~L~~~V~ 341 (697)
..++|+|.|.+| ||.++| .|.+|||||+.|.|+.++..++||+++++++||+|||+|.|. ++.+.++ .+|.++||
T Consensus 13 ~~~~L~V~V~~a~nL~~~~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~--i~~~~l~~~~L~~~V~ 89 (137)
T cd08409 13 TLNRLTVVVLRARGLRQLD-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFK--VTSRQLDTASLSLSVM 89 (137)
T ss_pred CCCeEEEEEEEecCCCccc-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEE--CCHHHhCccEEEEEEE
Confidence 468899999999 999999 888999999999999777778899999999999999999999 8888784 56999999
Q ss_pred cCCCCCCCCcccccccCc
Q 005415 342 DNSDTRDGEVNGALHEGK 359 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~ 359 (697)
|.+.+++++++|++.++.
T Consensus 90 ~~~~~~~~~~lG~v~ig~ 107 (137)
T cd08409 90 QSGGVRKSKLLGRVVLGP 107 (137)
T ss_pred eCCCCCCcceEEEEEECC
Confidence 999999999999998874
No 440
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.60 E-value=3.4e-16 Score=147.66 Aligned_cols=94 Identities=13% Similarity=0.037 Sum_probs=84.7
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAE-KDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~-~~L~~~V~ 341 (697)
+.+.|+|.|++| +|.++|.+|.+|||||+.+.++.+...++||+++++|+||+|||+|.|. ++.+.++ ..|.++||
T Consensus 12 ~~~~L~V~vi~a~~L~~~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~--i~~~~l~~~~l~~~V~ 89 (135)
T cd08410 12 SAGRLNVDIIRAKQLLQTDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFK--VPQEELENVSLVFTVY 89 (135)
T ss_pred CCCeEEEEEEEecCCCcccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEe--CCHHHhCCCEEEEEEE
Confidence 567899999999 9999999999999999999888776678899999999999999999999 8777774 45999999
Q ss_pred cCCCCCCCCcccccccCc
Q 005415 342 DNSDTRDGEVNGALHEGK 359 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~ 359 (697)
|+|..++++++|++.++.
T Consensus 90 d~d~~~~~~~iG~~~l~~ 107 (135)
T cd08410 90 GHNVKSSNDFIGRIVIGQ 107 (135)
T ss_pred eCCCCCCCcEEEEEEEcC
Confidence 999999999999997654
No 441
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.59 E-value=3.9e-16 Score=147.25 Aligned_cols=96 Identities=14% Similarity=0.041 Sum_probs=86.5
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
..+.|+|.|++| +|+++|..|.+|||||+++.+++++..++||+++++|+||+|||+|.|. ++.... ..+|.++||
T Consensus 13 ~~~~L~V~vi~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~--v~~~~~~~~~l~~~v~ 90 (136)
T cd08404 13 TTNRLTVVVLKARHLPKMDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFD--IPSEELEDISVEFLVL 90 (136)
T ss_pred CCCeEEEEEEEeeCCCccccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEE--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999998777778999999999999999999999 776666 455999999
Q ss_pred cCCCCCCCCcccccccCccc
Q 005415 342 DNSDTRDGEVNGALHEGKAD 361 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~ 361 (697)
|+|.+++++++|++.++...
T Consensus 91 d~d~~~~~~~iG~~~~~~~~ 110 (136)
T cd08404 91 DSDRVTKNEVIGRLVLGPKA 110 (136)
T ss_pred ECCCCCCCccEEEEEECCcC
Confidence 99999999999999987755
No 442
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.59 E-value=1.2e-14 Score=145.90 Aligned_cols=132 Identities=21% Similarity=0.301 Sum_probs=102.4
Q ss_pred EEeccCCCCceEEEEECCCCcEEEEEEEecchh---------hhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 420 EYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKD---------FFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 420 e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~---------~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+.||+|++|.||+|.+ .+..|++|+...... ......+|+.++..+.+ ++|+....++.....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~~~~~~~~ 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK------AGVNVPAVYFVDPEN 73 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH------CCCCCCeEEEEeCCC
Confidence 5799999999999986 678899998653211 12346678888888863 455555555666677
Q ss_pred EEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCC
Q 005415 491 LFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGS 569 (697)
Q Consensus 491 l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGl 569 (697)
.++||||++| +|.+.+.. ... ....++.+++.+|.+||+.+++|+|++|.|||++ .+.++|+|||.
T Consensus 74 ~~lv~e~~~G~~L~~~~~~---------~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~---~~~~~liDf~~ 140 (211)
T PRK14879 74 FIIVMEYIEGEPLKDLINS---------NGM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS---GGKIYLIDFGL 140 (211)
T ss_pred CEEEEEEeCCcCHHHHHHh---------ccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE---CCCEEEEECCc
Confidence 8999999976 55555431 111 6788999999999999999999999999999998 57799999998
Q ss_pred ccc
Q 005415 570 SCF 572 (697)
Q Consensus 570 a~~ 572 (697)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 865
No 443
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.58 E-value=1.1e-15 Score=141.98 Aligned_cols=98 Identities=10% Similarity=-0.031 Sum_probs=85.8
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
....|+|+|++| ||.++|.+|.+|||||+.++|+++. ++||+++++ +||+|||+|.|.. ++.+.+ +++|.+.||
T Consensus 14 ~~~~L~V~Vi~a~nL~~~~~~~~~d~yVk~~llp~~~~--~~kTkv~~~-~nP~fnE~F~f~~-i~~~~l~~~~L~~~V~ 89 (124)
T cd08389 14 SARKLTVTVIRAQDIPTKDRGGASSWQVHLVLLPSKKQ--RAKTKVQRG-PNPVFNETFTFSR-VEPEELNNMALRFRLY 89 (124)
T ss_pred CCCEEEEEEEEecCCCchhcCCCCCcEEEEEEccCCcc--eeecccccC-CCCcccCEEEECC-CCHHHhccCEEEEEEE
Confidence 557899999999 9999999999999999999999764 788999888 9999999999973 555555 677999999
Q ss_pred cCCCCCCCCcccccccCccccccc
Q 005415 342 DNSDTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d~e 365 (697)
|++++++++++|++.++-......
T Consensus 90 ~~~~~~~~~~lG~~~i~L~~l~~~ 113 (124)
T cd08389 90 GVERMRKERLIGEKVVPLSQLNLE 113 (124)
T ss_pred ECCCcccCceEEEEEEeccccCCC
Confidence 999999999999999887766443
No 444
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.57 E-value=1.4e-15 Score=142.78 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=86.4
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
..+.|+|.|.+| ||+++|..|.+|||||+.+.++..+..++||+++++|+||+|||+|.|. ++...+ ++.|.++||
T Consensus 11 ~~~~L~V~Vi~a~~L~~~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~--~~~~~l~~~~l~~~V~ 88 (133)
T cd08384 11 QRRGLIVGIIRCVNLAAMDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYD--IKHSDLAKKTLEITVW 88 (133)
T ss_pred CCCEEEEEEEEEcCCCCcCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEE--CCHHHhCCCEEEEEEE
Confidence 467899999999 9999999999999999999998877788999999999999999999999 776666 466999999
Q ss_pred cCCCCCCCCcccccccCcc
Q 005415 342 DNSDTRDGEVNGALHEGKA 360 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~ 360 (697)
|+|.+++++++|++.++..
T Consensus 89 d~d~~~~~~~lG~~~i~l~ 107 (133)
T cd08384 89 DKDIGKSNDYIGGLQLGIN 107 (133)
T ss_pred eCCCCCCccEEEEEEEecC
Confidence 9999999999999988764
No 445
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.57 E-value=1.5e-15 Score=142.00 Aligned_cols=98 Identities=14% Similarity=0.094 Sum_probs=83.5
Q ss_pred ccceeEEEEecc-CcccccCC-CCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~-g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V 340 (697)
....|+|.|.+| ||+++|.. |.+||||++.|+|++++ ++||+++++|+||+|||+|.|.. ++.+.+ +..|.+.|
T Consensus 14 ~~~~L~V~Vi~a~~L~~~~~~~~~~DpyV~v~l~~~~~~--~~kT~v~~~t~nP~wnE~F~f~~-~~~~~~~~~~L~~~V 90 (128)
T cd08388 14 EKKALLVNIIECRDLPAMDEQSGTSDPYVKLQLLPEKEH--KVKTRVLRKTRNPVYDETFTFYG-IPYNQLQDLSLHFAV 90 (128)
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCcCCEEEEEEeCCcCc--eeeccEEcCCCCCceeeEEEEcc-cCHHHhCCCEEEEEE
Confidence 457899999999 99999987 99999999999987654 77899999999999999999931 565555 45699999
Q ss_pred ccCCCCCCCCcccccccCcccccc
Q 005415 341 IDNSDTRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~~d~ 364 (697)
||+|++++++++|++.++..+++-
T Consensus 91 ~d~d~~~~d~~lG~~~i~L~~l~~ 114 (128)
T cd08388 91 LSFDRYSRDDVIGEVVCPLAGADL 114 (128)
T ss_pred EEcCCCCCCceeEEEEEeccccCC
Confidence 999999999999999887655543
No 446
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.57 E-value=1.5e-15 Score=140.78 Aligned_cols=99 Identities=13% Similarity=0.065 Sum_probs=87.4
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
..+.|+|.|.+| +|+++|.+|.+||||++++.|++.. ++||+++++|+||+|||+|.|. ++...+ +.+|.++||
T Consensus 14 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~--~~kT~v~~~t~~P~wne~f~f~--v~~~~l~~~~l~i~V~ 89 (124)
T cd08387 14 DMGILNVKLIQARNLQPRDFSGTADPYCKVRLLPDRSN--TKQSKIHKKTLNPEFDESFVFE--VPPQELPKRTLEVLLY 89 (124)
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCeEEEEEecCCCC--cEeCceEcCCCCCCcccEEEEe--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999987654 6789999999999999999998 887766 456999999
Q ss_pred cCCCCCCCCcccccccCcccccccC
Q 005415 342 DNSDTRDGEVNGALHEGKADAEEHG 366 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d~e~ 366 (697)
|++.+++++++|+++++..+....+
T Consensus 90 d~~~~~~~~~iG~~~i~l~~~~~~~ 114 (124)
T cd08387 90 DFDQFSRDECIGVVELPLAEVDLSE 114 (124)
T ss_pred ECCCCCCCceeEEEEEecccccCCC
Confidence 9999999999999999887776443
No 447
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.56 E-value=2.2e-15 Score=139.07 Aligned_cols=98 Identities=11% Similarity=0.033 Sum_probs=87.7
Q ss_pred ccceeEEEEecc-Cccccc-CCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAE 340 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d-~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V 340 (697)
..+.|+|.|.+| ||+++| ..|.+|||||++++|+.....++||+++++++||+|||+|.|. ++...+ .+.|.+.|
T Consensus 12 ~~~~L~V~v~~a~~L~~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~--i~~~~l~~~~l~i~v 89 (123)
T cd08521 12 KTGSLEVHIKECRNLAYADEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYH--ISKSQLETRTLQLSV 89 (123)
T ss_pred CCCEEEEEEEEecCCCCcCCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEe--CCHHHhCCCEEEEEE
Confidence 567899999999 999999 8899999999999998876678999999999999999999999 877666 45699999
Q ss_pred ccCCCCCCCCcccccccCccccc
Q 005415 341 IDNSDTRDGEVNGALHEGKADAE 363 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~~d 363 (697)
||++.+++++++|++.++..+..
T Consensus 90 ~d~~~~~~~~~iG~~~i~l~~l~ 112 (123)
T cd08521 90 WHHDRFGRNTFLGEVEIPLDSWD 112 (123)
T ss_pred EeCCCCcCCceeeEEEEeccccc
Confidence 99999999999999988776664
No 448
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.56 E-value=2.6e-15 Score=143.78 Aligned_cols=97 Identities=13% Similarity=0.009 Sum_probs=82.9
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcc-----------cccccc-c
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSD-----------LHFKGA-E 333 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~-----------v~~~~~-~ 333 (697)
+|+|.|.+| ||.+ .+|.+||||++++.+++++..+++|+++++|+||+|||+|.|+.. ++.+.. .
T Consensus 1 kL~V~Vi~ArnL~~--~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~~~~~~~ 78 (148)
T cd04010 1 KLSVRVIECSDLAL--KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMPEEDAEK 78 (148)
T ss_pred CEEEEEEeCcCCCC--CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCCcccccE
Confidence 589999999 9998 789999999999999887777899999999999999999999932 134444 3
Q ss_pred cccccccccCCCCCCCCcccccccCccccccc
Q 005415 334 KDLMPAEIDNSDTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 334 ~~L~~~V~D~d~~~~~d~~G~v~~~~~~~d~e 365 (697)
..|.+.|||.+.+++++++|++.+....+...
T Consensus 79 ~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~ 110 (148)
T cd04010 79 LELRVDLWHASMGGGDVFLGEVRIPLRGLDLQ 110 (148)
T ss_pred EEEEEEEEcCCCCCCCceeEEEEEeccccccc
Confidence 45999999999999999999999887666654
No 449
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.55 E-value=2.1e-14 Score=143.59 Aligned_cols=138 Identities=22% Similarity=0.216 Sum_probs=102.4
Q ss_pred eEEEEEeccCCCCceEEEEECCCCcEEEEEEEecchhh-----------------------hHhHHHHHHHHHHhcccCC
Q 005415 416 YYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDF-----------------------FDQSLDEIKLLKLVNKNDP 472 (697)
Q Consensus 416 Y~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~-----------------------~~~~~~Ei~iL~~L~~~~~ 472 (697)
|.+.+.||.|+||.||++.+ .+|+.||||+++.+... ......|+.++..+.+..
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~- 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG- 94 (198)
T ss_pred hhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC-
Confidence 77889999999999999986 47999999997653210 112456788888775431
Q ss_pred CCCCceeEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccc
Q 005415 473 ADEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENI 552 (697)
Q Consensus 473 ~~hpnIv~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NI 552 (697)
..++..++. ...++||||+++..+..+.. ......++.+++.++.++|+.||+||||+|+||
T Consensus 95 ---i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~-----------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Ni 156 (198)
T cd05144 95 ---FPVPKPIDW----NRHAVVMEYIDGVELYRVRV-----------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNI 156 (198)
T ss_pred ---CCCCceeec----CCceEEEEEeCCcchhhccc-----------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccE
Confidence 134444432 34589999998754332211 123567889999999999999999999999999
Q ss_pred cccccCcceEEEeeCCCcccccc
Q 005415 553 LIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 553 Ll~~~~~~~vKL~DFGla~~~~~ 575 (697)
+++. ++.++|+|||.+.....
T Consensus 157 ll~~--~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 157 LVDD--DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred EEcC--CCcEEEEECCccccCCC
Confidence 9985 78999999999865443
No 450
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.55 E-value=3.9e-15 Score=137.82 Aligned_cols=97 Identities=15% Similarity=0.167 Sum_probs=84.5
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
..+.|+|.|.+| ||.++|.+|.+||||++++.++.....++||+++++|+||+|||+|.|.. ++.+.+ +..|.++||
T Consensus 14 ~~~~L~V~vi~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~-~~~~~l~~~~l~~~V~ 92 (125)
T cd04031 14 VTSQLIVTVLQARDLPPRDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSN-VRRETLKERTLEVTVW 92 (125)
T ss_pred CCCEEEEEEEEecCCCCcCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcc-cCHHHhCCCEEEEEEE
Confidence 457899999999 99999999999999999999987766788999999999999999999982 233444 556999999
Q ss_pred cCCCCCCCCcccccccCccc
Q 005415 342 DNSDTRDGEVNGALHEGKAD 361 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~ 361 (697)
|++.+++++++|.+.++..+
T Consensus 93 d~~~~~~~~~iG~~~i~l~~ 112 (125)
T cd04031 93 DYDRDGENDFLGEVVIDLAD 112 (125)
T ss_pred eCCCCCCCcEeeEEEEeccc
Confidence 99999999999999887665
No 451
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.55 E-value=1.9e-15 Score=142.16 Aligned_cols=95 Identities=16% Similarity=0.099 Sum_probs=85.4
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccccc-ccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEK-DLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~-~L~~~V~ 341 (697)
..+.|+|.|.+| +|.++|..|.+|||||++|.+++++..++||+++++++||.|||+|.|. ++.+.++. .|.++||
T Consensus 12 ~~~~L~V~v~~A~~L~~~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~--i~~~~~~~~~l~~~v~ 89 (134)
T cd08403 12 TAGRLTLTIIKARNLKAMDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFD--VPPENVDNVSLIIAVV 89 (134)
T ss_pred CCCEEEEEEEEeeCCCccccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEE--CCHHHhCCCEEEEEEE
Confidence 467899999999 9999999999999999999988777778899999999999999999998 77766644 4999999
Q ss_pred cCCCCCCCCcccccccCcc
Q 005415 342 DNSDTRDGEVNGALHEGKA 360 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~ 360 (697)
|++++++++++|++.++..
T Consensus 90 d~~~~~~~~~IG~~~l~~~ 108 (134)
T cd08403 90 DYDRVGHNELIGVCRVGPN 108 (134)
T ss_pred ECCCCCCCceeEEEEECCC
Confidence 9999999999999988754
No 452
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.54 E-value=4.3e-15 Score=137.61 Aligned_cols=97 Identities=12% Similarity=0.078 Sum_probs=85.8
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
..+.|+|.|.+| ||.++|.+|.+||||++++.|++++ +++|+++++++||+|||+|.|. ++...+ ...|.+.||
T Consensus 14 ~~~~L~V~v~~a~~L~~~d~~~~~dpyv~v~l~~~~~~--~~kT~v~~~t~nP~wne~f~f~--i~~~~l~~~~l~~~V~ 89 (124)
T cd08385 14 QSNQLTVGIIQAADLPAMDMGGTSDPYVKVYLLPDKKK--KFETKVHRKTLNPVFNETFTFK--VPYSELGNKTLVFSVY 89 (124)
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCCEEEEEEEcCCCC--ceecccCcCCCCCceeeeEEEe--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999987754 7899999999999999999999 776555 456999999
Q ss_pred cCCCCCCCCcccccccCcccccc
Q 005415 342 DNSDTRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d~ 364 (697)
|+|.+++++++|++.++..+...
T Consensus 90 d~d~~~~~~~lG~~~i~l~~~~~ 112 (124)
T cd08385 90 DFDRFSKHDLIGEVRVPLLTVDL 112 (124)
T ss_pred eCCCCCCCceeEEEEEecCcccC
Confidence 99999999999999988766544
No 453
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.54 E-value=4e-15 Score=138.21 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=87.9
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
..+.|+|.|++| ||+++|.+|.+|||||++++++++...++||+++++++||+|||+|.|. ++...+ ...|.+.||
T Consensus 14 ~~~~L~V~vi~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~--i~~~~l~~~~l~i~v~ 91 (127)
T cd04030 14 QRQKLIVTVHKCRNLPPCDSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFP--VSLEELKRRTLDVAVK 91 (127)
T ss_pred CCCEEEEEEEEEECCCCccCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEe--cCHHHhcCCEEEEEEE
Confidence 457899999999 9999999999999999999998877789999999999999999999999 877666 456999999
Q ss_pred cCCCC--CCCCcccccccCcccccc
Q 005415 342 DNSDT--RDGEVNGALHEGKADAEE 364 (697)
Q Consensus 342 D~d~~--~~~d~~G~v~~~~~~~d~ 364 (697)
|.+.+ ++++++|++..+..++..
T Consensus 92 ~~~~~~~~~~~~iG~~~i~l~~l~~ 116 (127)
T cd04030 92 NSKSFLSREKKLLGQVLIDLSDLDL 116 (127)
T ss_pred ECCcccCCCCceEEEEEEecccccc
Confidence 99986 679999999888766644
No 454
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.54 E-value=4.1e-15 Score=140.26 Aligned_cols=95 Identities=16% Similarity=0.116 Sum_probs=85.5
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccc-cccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAE-KDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~-~~L~~~V~ 341 (697)
+.+.|+|.|.+| +|+++|.+|.+||||++++.+++++..+++|+++++|+||+|||+|.|. ++.+.++ ..|.++||
T Consensus 13 ~~~~l~V~Vi~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~--i~~~~l~~~~l~~~v~ 90 (136)
T cd08402 13 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFE--VPFEQIQKVHLIVTVL 90 (136)
T ss_pred CCCeEEEEEEEeeCCCcccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEE--CCHHHhCCCEEEEEEE
Confidence 667899999999 9999999999999999999987777678899999999999999999999 7766664 45999999
Q ss_pred cCCCCCCCCcccccccCcc
Q 005415 342 DNSDTRDGEVNGALHEGKA 360 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~ 360 (697)
|++.+++++++|++.++..
T Consensus 91 d~~~~~~~~~iG~~~i~~~ 109 (136)
T cd08402 91 DYDRIGKNDPIGKVVLGCN 109 (136)
T ss_pred eCCCCCCCceeEEEEECCc
Confidence 9999999999999988764
No 455
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.52 E-value=7.2e-14 Score=139.16 Aligned_cols=129 Identities=19% Similarity=0.257 Sum_probs=95.6
Q ss_pred EeccCCCCceEEEEECCCCcEEEEEEEecch---------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeE
Q 005415 421 YLGSAAFSKVFQAQDLHTGVDVCLKIIKNDK---------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHL 491 (697)
Q Consensus 421 ~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~---------~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l 491 (697)
.||+|++|.||++.+ ++..|++|...... ....+..+|+++++.+.+. ++.....++......
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~p~~~~~~~~~~ 72 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA------GVNTPVVYDVDPDNK 72 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC------CCCCCEEEEEECCCC
Confidence 389999999999984 67889999865321 1124566799999988753 232222233455667
Q ss_pred EEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeCCCc
Q 005415 492 FIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDLGSS 570 (697)
Q Consensus 492 ~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DFGla 570 (697)
++||||++| +|.+.+.... ..++.|++.+|.+||+.|++|+|++|.||+++ ++.++|+|||++
T Consensus 73 ~lv~e~~~g~~l~~~~~~~~-------------~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~---~~~~~liDfg~a 136 (199)
T TIGR03724 73 TIVMEYIEGKPLKDVIEEGN-------------DELLREIGRLVGKLHKAGIVHGDLTTSNIIVR---DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEEECCccHHHHHhhcH-------------HHHHHHHHHHHHHHHHCCeecCCCCcceEEEE---CCcEEEEECCCC
Confidence 899999976 4444432110 07899999999999999999999999999998 678999999988
Q ss_pred ccc
Q 005415 571 CFQ 573 (697)
Q Consensus 571 ~~~ 573 (697)
...
T Consensus 137 ~~~ 139 (199)
T TIGR03724 137 KYS 139 (199)
T ss_pred cCC
Confidence 653
No 456
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.52 E-value=5.1e-15 Score=164.29 Aligned_cols=97 Identities=12% Similarity=0.009 Sum_probs=90.8
Q ss_pred cccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccc-ccccc
Q 005415 263 INNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKD-LMPAE 340 (697)
Q Consensus 263 ~s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~-L~~~V 340 (697)
..+++|+|.|++| ||.+||.+|.+|||||++|+++.++.+|+||.++|+++||+|||+|.|. ++.+.++++ |.++|
T Consensus 295 p~~g~ltv~v~kar~L~~~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~--vp~~~l~~~~l~l~V 372 (421)
T KOG1028|consen 295 PTAGRLTVVVIKARNLKSMDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFD--VPPEQLAEVSLELTV 372 (421)
T ss_pred cCCCeEEEEEEEecCCCcccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEe--CCHHHhheeEEEEEE
Confidence 3679999999999 9999999999999999999999999999999999999999999999998 999999665 99999
Q ss_pred ccCCCCCCCCcccccccCccc
Q 005415 341 IDNSDTRDGEVNGALHEGKAD 361 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~ 361 (697)
||+|++++++++|.+.++...
T Consensus 373 ~d~d~~~~~~~iG~~~lG~~~ 393 (421)
T KOG1028|consen 373 WDHDTLGSNDLIGRCILGSDS 393 (421)
T ss_pred EEcccccccceeeEEEecCCC
Confidence 999999999999999887644
No 457
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.52 E-value=5.7e-14 Score=138.38 Aligned_cols=139 Identities=22% Similarity=0.291 Sum_probs=95.7
Q ss_pred EEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHh-------------------------HHHHHHHHHHhcccCCC
Q 005415 419 TEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQ-------------------------SLDEIKLLKLVNKNDPA 473 (697)
Q Consensus 419 ~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~-------------------------~~~Ei~iL~~L~~~~~~ 473 (697)
.+.||+|+||+||+|.+. +++.||||+++........ ...|...+..+...
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--- 77 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA--- 77 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc---
Confidence 467999999999999976 8999999998754221111 12455555555432
Q ss_pred CCCceeEEEEEEEecCeEEEEEEccccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHh-cCccccCCCCccc
Q 005415 474 DEHHILRLYDYFYHLEHLFIVCELLRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHS-LGIIHCDLKPENI 552 (697)
Q Consensus 474 ~hpnIv~l~~~f~~~~~l~LVmEyl~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs-~gIvHrDLKP~NI 552 (697)
+..+.++++. ...++||||++++........... . ...+..++.+++.++.++|. .+|+|+||||+||
T Consensus 78 -~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Ni 146 (187)
T cd05119 78 -GVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNI 146 (187)
T ss_pred -CCCCCceEec----CCCEEEEEEeCCCCccChhhhhhh-----h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhE
Confidence 1124444433 246899999987321100000000 1 15678899999999999999 9999999999999
Q ss_pred cccccCcceEEEeeCCCcccccc
Q 005415 553 LIKSYQRCEIKIIDLGSSCFQTD 575 (697)
Q Consensus 553 Ll~~~~~~~vKL~DFGla~~~~~ 575 (697)
+++ ++.++|+|||.+.....
T Consensus 147 li~---~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 147 LVD---DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred EEE---CCcEEEEECcccccccC
Confidence 998 67899999999865443
No 458
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.51 E-value=1.1e-14 Score=132.67 Aligned_cols=94 Identities=12% Similarity=0.005 Sum_probs=80.4
Q ss_pred ceeEEEEecc-CcccccCC-CCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc--ccccccccc
Q 005415 266 DYGYLSSKEA-DLIDLQHN-VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA--EKDLMPAEI 341 (697)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~~-g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~--~~~L~~~V~ 341 (697)
+.|+|.|.+| +|+++|.. |.+||||++++.++++ .+++|+++++|+||+|||+|.|. +...+. +..|.++||
T Consensus 1 G~L~V~v~~a~~L~~~d~~~~~~Dpyv~v~~~~~~~--~~~kT~v~~~t~nP~Wne~f~f~--~~~~~~~~~~~l~~~V~ 76 (111)
T cd04041 1 GVLVVTIHRATDLPKADFGTGSSDPYVTASFAKFGK--PLYSTRIIRKDLNPVWEETWFVL--VTPDEVKAGERLSCRLW 76 (111)
T ss_pred CEEEEEEEEeeCCCcccCCCCCCCccEEEEEccCCC--ccEeeeeECCCCCCccceeEEEE--eCchhccCCCEEEEEEE
Confidence 4689999999 99999998 9999999999987654 36789999999999999999997 544433 455999999
Q ss_pred cCCCCCCCCcccccccCccccc
Q 005415 342 DNSDTRDGEVNGALHEGKADAE 363 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d 363 (697)
|+|+++.++++|++.++..++.
T Consensus 77 d~d~~~~dd~lG~~~i~l~~l~ 98 (111)
T cd04041 77 DSDRFTADDRLGRVEIDLKELI 98 (111)
T ss_pred eCCCCCCCCcceEEEEEHHHHh
Confidence 9999999999999988765555
No 459
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.51 E-value=1.1e-14 Score=137.43 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=85.5
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
..+.|+|.|.+| ||.++|..|.+|||||+.+.+..++..++||++.++++||+|||+|.|. ++.+.+ +..|.++||
T Consensus 13 ~~~~L~v~vi~a~~L~~~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~--i~~~~~~~~~l~~~v~ 90 (136)
T cd08405 13 TANRITVNIIKARNLKAMDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFN--IPLERLRETTLIITVM 90 (136)
T ss_pred CCCeEEEEEEEeeCCCccccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEe--CCHHHhCCCEEEEEEE
Confidence 457899999999 9999999999999999999987766668899999999999999999999 777666 456999999
Q ss_pred cCCCCCCCCcccccccCccc
Q 005415 342 DNSDTRDGEVNGALHEGKAD 361 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~ 361 (697)
|++.+++++++|++.++..+
T Consensus 91 d~~~~~~~~~lG~~~i~~~~ 110 (136)
T cd08405 91 DKDRLSRNDLIGKIYLGWKS 110 (136)
T ss_pred ECCCCCCCcEeEEEEECCcc
Confidence 99999999999999887644
No 460
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.49 E-value=1.1e-14 Score=147.50 Aligned_cols=204 Identities=19% Similarity=0.254 Sum_probs=151.4
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc---hhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCe
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND---KDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEH 490 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~---~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~ 490 (697)
+...++.+|...-.|..|+|++. |..++.|++.-. ......+..|.-.|+.. .||||+.+++.+.+..+
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrif------shpnilpvlgacnsppn 261 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIF------SHPNILPVLGACNSPPN 261 (448)
T ss_pred hhhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeee------cCCchhhhhhhccCCCC
Confidence 34556778899999999999985 456677877532 22223455555555444 58999999999999999
Q ss_pred EEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcC--ccccCCCCccccccccCcceEEEeeC
Q 005415 491 LFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLG--IIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 491 l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~g--IvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
+.++..||+ ++|+..+.... .......++.+++.+++.|++|||+.. |.---|....++|+.+-..++-.+|-
T Consensus 262 lv~isq~mp~gslynvlhe~t----~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 262 LVIISQYMPFGSLYNVLHEQT----SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred ceEeeeeccchHHHHHHhcCc----cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccc
Confidence 999999998 78888876432 233677788999999999999999975 44456888899998633334444453
Q ss_pred CCccccccccccccccCCCCCchhhcCCCCC---chhhHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHH
Q 005415 568 GSSCFQTDNLCLYVQSRSYRAPEVIIGLPYD---QKIDLWSLGCILAELWTGEVLFPNDAVVMILARII 633 (697)
Q Consensus 568 Gla~~~~~~~~~~~gt~~Y~APE~l~~~~~s---~ksDIWSLGviL~ELltG~~PF~~~~~~e~l~~I~ 633 (697)
-++.... ...-.|.|++||.+..++-+ .++|+|||+++||||.|.+.||..-++.+.-.+|.
T Consensus 338 kfsfqe~----gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia 402 (448)
T KOG0195|consen 338 KFSFQEV----GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA 402 (448)
T ss_pred eeeeecc----ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh
Confidence 3332211 12347889999999877643 46999999999999999999999999888777764
No 461
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.49 E-value=1.4e-13 Score=158.37 Aligned_cols=135 Identities=21% Similarity=0.244 Sum_probs=102.2
Q ss_pred CceEEEEEeccCCCCceEEEEECCCCcEEEEEEEecc----h-----hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEE
Q 005415 414 GRYYVTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKND----K-----DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDY 484 (697)
Q Consensus 414 ~rY~i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~----~-----~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~ 484 (697)
..|...+.||+|+||+||++.+.. ..+++|+.... . .....+.+|+++++.++ |++++....+
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~p~~~ 404 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR------RAGVPTPVIY 404 (535)
T ss_pred cccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc------ccCCCeeEEE
Confidence 445667899999999999998643 34444443211 1 12345678899998886 4577777767
Q ss_pred EEecCeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEE
Q 005415 485 FYHLEHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIK 563 (697)
Q Consensus 485 f~~~~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vK 563 (697)
+......++||||+++ +|.+++. ....++.|++.+|.+||+.||+||||||+|||++ ++.++
T Consensus 405 ~~~~~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~---~~~~~ 467 (535)
T PRK09605 405 DVDPEEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR---DDRLY 467 (535)
T ss_pred EEeCCCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE---CCcEE
Confidence 7777778999999976 4544432 2467899999999999999999999999999994 67899
Q ss_pred EeeCCCcccc
Q 005415 564 IIDLGSSCFQ 573 (697)
Q Consensus 564 L~DFGla~~~ 573 (697)
|+|||+++..
T Consensus 468 liDFGla~~~ 477 (535)
T PRK09605 468 LIDFGLGKYS 477 (535)
T ss_pred EEeCcccccC
Confidence 9999998653
No 462
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.48 E-value=6.8e-14 Score=155.88 Aligned_cols=197 Identities=19% Similarity=0.210 Sum_probs=145.7
Q ss_pred CCCCceeEEEEEEEecCeEEEEEEccc-cchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCc-cccCCCCc
Q 005415 473 ADEHHILRLYDYFYHLEHLFIVCELLR-ANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGI-IHCDLKPE 550 (697)
Q Consensus 473 ~~hpnIv~l~~~f~~~~~l~LVmEyl~-gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gI-vHrDLKP~ 550 (697)
..|.|+.++++.+..+...++|.+|+. |+|.+.+.... ..++..-...++++|+.||.|||.-.| .|+.++..
T Consensus 4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS 78 (484)
T ss_pred cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence 458899999999999999999999997 67777776422 227777788899999999999998765 99999999
Q ss_pred cccccccCcceEEEeeCCCcccccc-----ccccccccCCCCCchhhcCCC-------CCchhhHHHHHHHHHHHHhCCC
Q 005415 551 NILIKSYQRCEIKIIDLGSSCFQTD-----NLCLYVQSRSYRAPEVIIGLP-------YDQKIDLWSLGCILAELWTGEV 618 (697)
Q Consensus 551 NILl~~~~~~~vKL~DFGla~~~~~-----~~~~~~gt~~Y~APE~l~~~~-------~s~ksDIWSLGviL~ELltG~~ 618 (697)
|++++. ...+||+|||+...... .........-|.|||.+.+.. .+.+.||||+|++++|+++...
T Consensus 79 nClvd~--~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 79 NCLVDS--RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cceeee--eEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 999995 89999999999876642 111112234599999997641 4667999999999999999999
Q ss_pred CCCCC----cHHHHHHHHHHhhCCCCHHHHhhcccccccccCCchhhhhHHHHHHHHHHHhhhhccCHHHHH
Q 005415 619 LFPND----AVVMILARIIGMLGPIDLEMLMQGQEIYKYFTKEYDLYYINEVCFANIFISLVVIRLTLEYAA 686 (697)
Q Consensus 619 PF~~~----~~~e~l~~I~~~lg~~p~e~~~~~~~~~~~~~~~~~l~~i~~~cw~~l~~~~~~~r~t~e~~~ 686 (697)
||... ++.+++.++.+...++......... ...+.+..++++||... |..|.+++++.
T Consensus 157 ~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~------e~~~~l~~l~~~cw~e~----P~~rPs~~~i~ 218 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLN------ELPPELLLLVARCWEEI----PEKRPSIEQIR 218 (484)
T ss_pred ccccccccCChHHHHHHHHhcCCCCcCcchhhhh------hcchHHHHHHHHhcccC----hhhCccHHHHH
Confidence 99763 2334555544412222222211111 23347889999999987 66777776665
No 463
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.48 E-value=3.4e-14 Score=131.68 Aligned_cols=98 Identities=12% Similarity=0.097 Sum_probs=84.5
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
....|+|.|.+| ||+++|.+|.+||||+++++++... +.+|+++++|+||+|||+|.|.. ++.+.+ ++.|.++||
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~--~~kT~v~~~t~~P~Wne~f~f~~-~~~~~l~~~~l~~~v~ 90 (125)
T cd08386 14 QESTLTLKILKAVELPAKDFSGTSDPFVKIYLLPDKKH--KLETKVKRKNLNPHWNETFLFEG-FPYEKLQQRVLYLQVL 90 (125)
T ss_pred CCCEEEEEEEEecCCCCccCCCCCCceEEEEECCCCCc--ceeeeeecCCCCCccceeEEEcc-cCHHHhCCCEEEEEEE
Confidence 346899999999 9999999999999999999987654 68999999999999999999973 344444 556999999
Q ss_pred cCCCCCCCCcccccccCcccccc
Q 005415 342 DNSDTRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d~ 364 (697)
|+|++++++++|+++++..+.+.
T Consensus 91 d~d~~~~~~~iG~~~i~l~~l~~ 113 (125)
T cd08386 91 DYDRFSRNDPIGEVSLPLNKVDL 113 (125)
T ss_pred eCCCCcCCcEeeEEEEecccccC
Confidence 99999999999999998776664
No 464
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.47 E-value=3e-14 Score=133.99 Aligned_cols=99 Identities=14% Similarity=0.045 Sum_probs=84.5
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCC--CccccceeecccCCCcceecccccCccccccc---cccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPG--TEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKG---AEKDLM 337 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~--~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~---~~~~L~ 337 (697)
....|+|.|.+| +|+++|..|.+||||++++.++.+ ...++||+++++|+||+|||+|.|. +.... .+..|.
T Consensus 14 ~~~~L~V~Vi~A~~L~~~~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~--i~~~~~~~~~~~l~ 91 (133)
T cd04009 14 SEQSLRVEILNARNLLPLDSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFN--VPPEQCSVEGALLL 91 (133)
T ss_pred CCCEEEEEEEEeeCCCCcCCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEE--echhhcccCCCEEE
Confidence 346899999999 999999999999999999998764 3568999999999999999999999 65432 245699
Q ss_pred cccccCCCCCCCCcccccccCcccccc
Q 005415 338 PAEIDNSDTRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 338 ~~V~D~d~~~~~d~~G~v~~~~~~~d~ 364 (697)
++|||++++++++++|+++++..++.+
T Consensus 92 ~~V~d~d~~~~d~~iG~~~i~l~~l~~ 118 (133)
T cd04009 92 FTVKDYDLLGSNDFEGEAFLPLNDIPG 118 (133)
T ss_pred EEEEecCCCCCCcEeEEEEEeHHHCCc
Confidence 999999999999999999887655554
No 465
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.47 E-value=4.4e-13 Score=124.86 Aligned_cols=134 Identities=20% Similarity=0.233 Sum_probs=108.1
Q ss_pred EEEEeccCCCCceEEEEECCCCcEEEEEEEecchhhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEEEecCeEEEEEEc
Q 005415 418 VTEYLGSAAFSKVFQAQDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHLEHLFIVCEL 497 (697)
Q Consensus 418 i~e~LG~G~fG~Vy~a~d~~~g~~VAVKii~~~~~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f~~~~~l~LVmEy 497 (697)
+++.||.|.++.||++.+. +..+++|....... ...+..|+.+++.+++. ..++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~----~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-GADREREVAILQLLARK----GLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc-hhHHHHHHHHHHHHHHc----CCCCCeEEEEcCCCCccEEEEEe
Confidence 4678999999999999864 37899999876543 45788899999999764 24678888888777889999999
Q ss_pred cccchHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhc---CccccCCCCccccccccCcceEEEeeCCCccc
Q 005415 498 LRANLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSL---GIIHCDLKPENILIKSYQRCEIKIIDLGSSCF 572 (697)
Q Consensus 498 l~gsL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~---gIvHrDLKP~NILl~~~~~~~vKL~DFGla~~ 572 (697)
+.+..... ++......++.+++.+|.+||.. +++|+|++|.||+++. .+.++++||+.+..
T Consensus 75 ~~g~~~~~------------~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~--~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDE------------VSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD--GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeeccc------------CCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC--CcEEEEEecccccC
Confidence 97653221 13455677889999999999985 6999999999999985 68899999998754
No 466
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.46 E-value=3.3e-14 Score=132.25 Aligned_cols=89 Identities=15% Similarity=0.047 Sum_probs=76.5
Q ss_pred eEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccc---ccc-cccccccccc
Q 005415 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHF---KGA-EKDLMPAEID 342 (697)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~---~~~-~~~L~~~V~D 342 (697)
++|.|.+| ||.++|.+|.+||||++.+. ..++||+++++|+||+|||+|.|. ++. +.. ...|.++|||
T Consensus 1 ~~V~V~~A~~L~~~d~~g~~dpYv~v~l~-----~~~~kT~v~~~t~nP~Wne~f~F~--v~~~~~~~~~~~~l~~~v~d 73 (126)
T cd08682 1 VQVTVLQARGLLCKGKSGTNDAYVIIQLG-----KEKYSTSVKEKTTSPVWKEECSFE--LPGLLSGNGNRATLQLTVMH 73 (126)
T ss_pred CEEEEEECcCCcCCCCCcCCCceEEEEEC-----CeeeeeeeecCCCCCEeCceEEEE--ecCcccCCCcCCEEEEEEEE
Confidence 47899999 99999999999999999985 246789999999999999999998 665 223 4559999999
Q ss_pred CCCCCCCCcccccccCccccc
Q 005415 343 NSDTRDGEVNGALHEGKADAE 363 (697)
Q Consensus 343 ~d~~~~~d~~G~v~~~~~~~d 363 (697)
++.+++++++|.+.+...++.
T Consensus 74 ~~~~~~d~~iG~~~i~l~~l~ 94 (126)
T cd08682 74 RNLLGLDKFLGQVSIPLNDLD 94 (126)
T ss_pred ccccCCCceeEEEEEEHHHhh
Confidence 999999999999988766554
No 467
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.45 E-value=4.6e-14 Score=128.09 Aligned_cols=92 Identities=10% Similarity=-0.044 Sum_probs=76.0
Q ss_pred ceeEEEEecc-CcccccCC----CCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccccccccccc
Q 005415 266 DYGYLSSKEA-DLIDLQHN----VVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAE 340 (697)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~~----g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V 340 (697)
+.|.|.|++| +|+++|.. +.+||||++.+- .+++||+++++|+||+|||.|.|. +........|.+.|
T Consensus 1 g~l~v~v~~A~~L~~~~~~~~~~~~~DPYv~v~~~-----~~~~kT~v~~~t~nPvWne~f~f~--v~~~~~~~~L~~~V 73 (108)
T cd04039 1 GVVFMEIKSITDLPPLKNMTRTGFDMDPFVIISFG-----RRVFRTSWRRHTLNPVFNERLAFE--VYPHEKNFDIQFKV 73 (108)
T ss_pred CEEEEEEEeeeCCCCccccCCCCCccCceEEEEEC-----CEeEeeeeecCCCCCcccceEEEE--EeCccCCCEEEEEE
Confidence 4688999999 99999842 347999999982 246789999999999999999998 65544455699999
Q ss_pred ccCCCCCCCCcccccccCcccccc
Q 005415 341 IDNSDTRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~~d~ 364 (697)
||+|++++++++|.+++...++..
T Consensus 74 ~D~d~~~~dd~IG~~~l~L~~l~~ 97 (108)
T cd04039 74 LDKDKFSFNDYVATGSLSVQELLN 97 (108)
T ss_pred EECCCCCCCcceEEEEEEHHHHHh
Confidence 999999999999999887655444
No 468
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.44 E-value=6.1e-14 Score=127.46 Aligned_cols=91 Identities=12% Similarity=0.081 Sum_probs=79.6
Q ss_pred eEEEEecc-CcccccC-CCCCCcceEeeccCCCCCccccceeecccCCCcce-ecccccCcccccccc-ccccccccccC
Q 005415 268 GYLSSKEA-DLIDLQH-NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDW-IEGFKGSSDLHFKGA-EKDLMPAEIDN 343 (697)
Q Consensus 268 l~v~l~e~-~L~~~d~-~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~f-nE~f~f~~~v~~~~~-~~~L~~~V~D~ 343 (697)
|+|.|.+| +|++||. +|.+||||++++.. .++||+++++++||.| ||+|.|. ++...+ +..|.++|||+
T Consensus 1 l~V~v~~a~~L~~~d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~--i~~~~l~~~~l~i~V~d~ 73 (110)
T cd08688 1 LKVRVVAARDLPVMDRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFE--VDDEELQDEPLQIRVMDH 73 (110)
T ss_pred CEEEEEEEECCCccccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEE--cChHHcCCCeEEEEEEeC
Confidence 67999999 9999994 78999999999953 5788999999999999 9999999 776665 45699999999
Q ss_pred CCCCCCCcccccccCccccccc
Q 005415 344 SDTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 344 d~~~~~d~~G~v~~~~~~~d~e 365 (697)
+.+++++++|++.+...++...
T Consensus 74 d~~~~~~~iG~~~~~l~~l~~~ 95 (110)
T cd08688 74 DTYSANDAIGKVYIDLNPLLLK 95 (110)
T ss_pred CCCCCCCceEEEEEeHHHhccc
Confidence 9999999999999887766653
No 469
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.43 E-value=7.9e-14 Score=128.80 Aligned_cols=98 Identities=15% Similarity=0.058 Sum_probs=84.9
Q ss_pred ccceeEEEEecc-Cccccc-CCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccc-ccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAE-KDLMPAE 340 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d-~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~-~~L~~~V 340 (697)
.++.|+|.|.+| ||+++| ..|.+||||+++++|+.++ +++|+++++++||+|||+|.|. ++...++ +.|.+.|
T Consensus 12 ~~~~L~V~v~~a~~L~~~~~~~~~~dpyV~v~l~~~~~~--~~~T~v~~~~~~P~wne~f~f~--i~~~~l~~~~l~i~v 87 (123)
T cd08390 12 EEEQLTVSLIKARNLPPRTKDVAHCDPFVKVCLLPDERR--SLQSKVKRKTQNPNFDETFVFQ--VSFKELQRRTLRLSV 87 (123)
T ss_pred CCCEEEEEEEEecCCCCccCCCCCCCcEEEEEEeeCCCC--ceEeeeEcCCCCCccceEEEEE--cCHHHhcccEEEEEE
Confidence 457899999999 999999 6889999999999988754 6789999999999999999999 8777664 5699999
Q ss_pred ccCCCCCCCCcccccccCccccccc
Q 005415 341 IDNSDTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 341 ~D~d~~~~~d~~G~v~~~~~~~d~e 365 (697)
||++..++++++|++.++..+....
T Consensus 88 ~d~~~~~~~~~iG~~~i~L~~l~~~ 112 (123)
T cd08390 88 YDVDRFSRHCIIGHVLFPLKDLDLV 112 (123)
T ss_pred EECCcCCCCcEEEEEEEeccceecC
Confidence 9999999999999998876555443
No 470
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.43 E-value=7.9e-14 Score=129.12 Aligned_cols=89 Identities=18% Similarity=0.065 Sum_probs=74.5
Q ss_pred eEEEEecc-Cccccc-CCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCC
Q 005415 268 GYLSSKEA-DLIDLQ-HNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 345 (697)
Q Consensus 268 l~v~l~e~-~L~~~d-~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~ 345 (697)
|+|.|.+| ||++++ .+|.+||||++++. + +.+.||+++++|+||+|||+|.|. ++.. .++|.+.|||+|+
T Consensus 2 l~v~v~~a~~L~~~~~~~g~sDpYv~v~l~--~--~~~~kT~v~~kt~~P~WnE~F~f~--v~~~--~~~l~~~v~d~~~ 73 (121)
T cd08401 2 LKIKIGEAKNLPPRSGPNKMRDCYCTVNLD--Q--EEVFRTKTVEKSLCPFFGEDFYFE--IPRT--FRHLSFYIYDRDV 73 (121)
T ss_pred eEEEEEEccCCCCCCCCCCCcCcEEEEEEC--C--ccEEEeeEEECCCCCccCCeEEEE--cCCC--CCEEEEEEEECCC
Confidence 67899999 999985 57899999999993 2 236789999999999999999999 7643 3569999999999
Q ss_pred CCCCCcccccccCcccccc
Q 005415 346 TRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 346 ~~~~d~~G~v~~~~~~~d~ 364 (697)
+++++++|.+.+...++..
T Consensus 74 ~~~~~~iG~~~i~l~~l~~ 92 (121)
T cd08401 74 LRRDSVIGKVAIKKEDLHK 92 (121)
T ss_pred CCCCceEEEEEEEHHHccC
Confidence 9999999999876555443
No 471
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.42 E-value=2.1e-13 Score=127.23 Aligned_cols=90 Identities=10% Similarity=-0.060 Sum_probs=74.5
Q ss_pred cccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccc
Q 005415 263 INNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEI 341 (697)
Q Consensus 263 ~s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~ 341 (697)
...+.|+|.|.+| +|+ +|..|.+|||||+++. ..++||++.++++||+|||+|.|. .........|.++||
T Consensus 25 ~~~~~L~V~V~~A~~L~-~d~~g~~DPYVkV~~~-----~~~~kT~vi~~t~nPvWNE~F~f~--~~~~~~~~~L~v~V~ 96 (127)
T cd04032 25 RGLATLTVTVLRATGLW-GDYFTSTDGYVKVFFG-----GQEKRTEVIWNNNNPRWNATFDFG--SVELSPGGKLRFEVW 96 (127)
T ss_pred CCcEEEEEEEEECCCCC-cCcCCCCCeEEEEEEC-----CccccCceecCCCCCcCCCEEEEe--cccCCCCCEEEEEEE
Confidence 3557899999999 997 5888899999999983 228899999999999999999997 222123445999999
Q ss_pred cCCCCCCCCcccccccCcc
Q 005415 342 DNSDTRDGEVNGALHEGKA 360 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~ 360 (697)
|+|.+++++++|.+.++..
T Consensus 97 D~d~~s~dd~IG~~~i~l~ 115 (127)
T cd04032 97 DRDNGWDDDLLGTCSVVPE 115 (127)
T ss_pred eCCCCCCCCeeEEEEEEec
Confidence 9999999999999987654
No 472
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.39 E-value=4.3e-12 Score=131.29 Aligned_cols=133 Identities=17% Similarity=0.189 Sum_probs=95.9
Q ss_pred Eec-cCCCCceEEEEECCCCcEEEEEEEecch--------------hhhHhHHHHHHHHHHhcccCCCCCCceeEEEEEE
Q 005415 421 YLG-SAAFSKVFQAQDLHTGVDVCLKIIKNDK--------------DFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYF 485 (697)
Q Consensus 421 ~LG-~G~fG~Vy~a~d~~~g~~VAVKii~~~~--------------~~~~~~~~Ei~iL~~L~~~~~~~hpnIv~l~~~f 485 (697)
.|| .|+.|+||.+.. .+..++||.+.... .......+|+.++..+.+.. ..+++.+++.
T Consensus 38 ~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g----i~vP~pl~~~ 111 (239)
T PRK01723 38 VVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG----LPVPRPIAAR 111 (239)
T ss_pred eeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC----CCCceeEeee
Confidence 466 788889999875 47889999885311 12245678999999997542 2346666654
Q ss_pred Eec-C---eEEEEEEcccc--chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCc
Q 005415 486 YHL-E---HLFIVCELLRA--NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQR 559 (697)
Q Consensus 486 ~~~-~---~l~LVmEyl~g--sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~ 559 (697)
... . ..++|||++++ +|.+++... .++.. .+.||+.+|.+||++||+|+||||.|||++. +
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~--~ 178 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQEA-------PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDP--D 178 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhcC-------CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcC--C
Confidence 432 2 23599999985 555554321 13433 3578999999999999999999999999985 5
Q ss_pred ceEEEeeCCCccc
Q 005415 560 CEIKIIDLGSSCF 572 (697)
Q Consensus 560 ~~vKL~DFGla~~ 572 (697)
+.++|+|||.+..
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 6899999998764
No 473
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.38 E-value=3.4e-13 Score=129.75 Aligned_cols=92 Identities=14% Similarity=0.014 Sum_probs=73.8
Q ss_pred EEEEecc---CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccc------cc-cccccc
Q 005415 269 YLSSKEA---DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFK------GA-EKDLMP 338 (697)
Q Consensus 269 ~v~l~e~---~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~------~~-~~~L~~ 338 (697)
.|+|+.| +|++.+.+|.+|||||++|+....+..+.||+++|+|+||+|||+|.|. ++.. .+ ++.|.+
T Consensus 5 el~i~~~~~~~l~~~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~--I~~~~~~~~R~l~~~~L~~ 82 (155)
T cd08690 5 ELTIVRCIGIPLPSGWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLN--INRKHRSFQRVFKRHGLKF 82 (155)
T ss_pred EEEEEEeeccccCCCcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEE--eccccchhhhhccCCcEEE
Confidence 3445555 5889999999999999998544556779999999999999999999999 6655 23 445999
Q ss_pred ccccCCCCC-CCCcccccccCcccc
Q 005415 339 AEIDNSDTR-DGEVNGALHEGKADA 362 (697)
Q Consensus 339 ~V~D~d~~~-~~d~~G~v~~~~~~~ 362 (697)
+|||.+.+. +++++|.+.+.....
T Consensus 83 ~V~d~~~f~~~D~~iG~~~i~L~~l 107 (155)
T cd08690 83 EVYHKGGFLRSDKLLGTAQVKLEPL 107 (155)
T ss_pred EEEeCCCcccCCCeeEEEEEEcccc
Confidence 999999974 699999997754443
No 474
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.38 E-value=3.1e-13 Score=124.43 Aligned_cols=89 Identities=11% Similarity=0.033 Sum_probs=75.7
Q ss_pred eEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCCC
Q 005415 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 346 (697)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~~ 346 (697)
|+|.|.+| +|++.|..|.+||||++.+...+. .+++|++.++|+||+|||+|.|. +... ....|.++|||+|.+
T Consensus 2 L~V~vi~a~~L~~~~~~~~~Dpyv~v~~~~~~~--~~~kT~vv~~t~nP~Wne~f~f~--i~~~-~~~~l~v~v~d~d~~ 76 (119)
T cd04036 2 LTVRVLRATNITKGDLLSTPDCYVELWLPTASD--EKKRTKTIKNSINPVWNETFEFR--IQSQ-VKNVLELTVMDEDYV 76 (119)
T ss_pred eEEEEEEeeCCCccCCCCCCCcEEEEEEcCCCC--ccCccceecCCCCCccceEEEEE--eCcc-cCCEEEEEEEECCCC
Confidence 78999999 999999999999999999965543 47889999999999999999998 6554 334599999999999
Q ss_pred CCCCcccccccCcccc
Q 005415 347 RDGEVNGALHEGKADA 362 (697)
Q Consensus 347 ~~~d~~G~v~~~~~~~ 362 (697)
+++++|++.+....+
T Consensus 77 -~~~~iG~~~~~l~~l 91 (119)
T cd04036 77 -MDDHLGTVLFDVSKL 91 (119)
T ss_pred -CCcccEEEEEEHHHC
Confidence 899999997765443
No 475
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.37 E-value=3.6e-13 Score=123.21 Aligned_cols=88 Identities=15% Similarity=0.132 Sum_probs=75.1
Q ss_pred eEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCCC
Q 005415 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 346 (697)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~~ 346 (697)
++|.|.+| ||+++|.+|.+||||++++. ..+.||++.++|+||.|||+|.|. +... .+..|.++|||++.+
T Consensus 2 ~~V~v~~a~~L~~~~~~~~~dPyv~v~~~-----~~~~kT~v~~~t~nP~Wne~f~f~--~~~~-~~~~l~v~v~d~~~~ 73 (116)
T cd08376 2 VTIVLVEGKNLPPMDDNGLSDPYVKFRLG-----NEKYKSKVCSKTLNPQWLEQFDLH--LFDD-QSQILEIEVWDKDTG 73 (116)
T ss_pred EEEEEEEEECCCCCCCCCCCCcEEEEEEC-----CEeEecccccCCCCCceeEEEEEE--ecCC-CCCEEEEEEEECCCC
Confidence 68999999 99999999999999999983 246889999999999999999998 5533 245699999999999
Q ss_pred CCCCcccccccCccccc
Q 005415 347 RDGEVNGALHEGKADAE 363 (697)
Q Consensus 347 ~~~d~~G~v~~~~~~~d 363 (697)
++++++|.+..+..+..
T Consensus 74 ~~~~~iG~~~~~l~~l~ 90 (116)
T cd08376 74 KKDEFIGRCEIDLSALP 90 (116)
T ss_pred CCCCeEEEEEEeHHHCC
Confidence 99999999987654433
No 476
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.37 E-value=3.7e-13 Score=125.36 Aligned_cols=90 Identities=9% Similarity=0.011 Sum_probs=76.9
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccc-ccc-ccccccccccC
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHF-KGA-EKDLMPAEIDN 343 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~-~~~-~~~L~~~V~D~ 343 (697)
+|+|.|.+| +|.++|.+|.+||||++++.. .+++|+++++++||+|||+|.|. +.. ... +..|.++|||.
T Consensus 1 ~L~V~vi~A~~L~~~d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~--~~~~~~~~~~~l~~~V~d~ 73 (127)
T cd04022 1 KLVVEVVDAQDLMPKDGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFN--VSDPSRLSNLVLEVYVYND 73 (127)
T ss_pred CeEEEEEEeeCCCCCCCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEE--ccCHHHccCCeEEEEEeeC
Confidence 589999999 999999999999999999874 36789999999999999999999 553 222 45599999999
Q ss_pred CCCC-CCCcccccccCccccc
Q 005415 344 SDTR-DGEVNGALHEGKADAE 363 (697)
Q Consensus 344 d~~~-~~d~~G~v~~~~~~~d 363 (697)
+.+. +++++|++.++..++.
T Consensus 74 ~~~~~~d~~lG~v~i~l~~l~ 94 (127)
T cd04022 74 RRSGRRRSFLGRVRISGTSFV 94 (127)
T ss_pred CCCcCCCCeeeEEEEcHHHcC
Confidence 9997 7999999988765554
No 477
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.36 E-value=2.9e-13 Score=129.94 Aligned_cols=94 Identities=15% Similarity=0.106 Sum_probs=77.6
Q ss_pred eeEEEEecc-CcccccCCC--------------CCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccc
Q 005415 267 YGYLSSKEA-DLIDLQHNV--------------VGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKG 331 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g--------------~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~ 331 (697)
.|+|.|.+| +|++||..+ .+||||++.+.. ++.||+++++++||+|||+|.|. +....
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~--v~~p~ 73 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFP--EMFPP 73 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEE--eeCCC
Confidence 478999999 999999665 689999999853 25689999999999999999998 54444
Q ss_pred cccccccccccCCCCCCCCcccccccCcccccccCC
Q 005415 332 AEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGV 367 (697)
Q Consensus 332 ~~~~L~~~V~D~d~~~~~d~~G~v~~~~~~~d~e~~ 367 (697)
.+..|.++|||+|.+++++++|.+.+....+...+.
T Consensus 74 ~~~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~ 109 (151)
T cd04018 74 LCERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGD 109 (151)
T ss_pred cCCEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCc
Confidence 555699999999999999999999887655555443
No 478
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.36 E-value=5.1e-13 Score=123.62 Aligned_cols=90 Identities=17% Similarity=0.043 Sum_probs=76.9
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCC
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 345 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~ 345 (697)
+|+|.|.+| +|.++|.+|.+||||++++. ..+.+|++.++|+||.|||+|.|. +.... ...|.++|||++.
T Consensus 1 ~L~v~vi~a~~L~~~d~~~~~DPyv~v~~~-----~~~~kT~v~~~t~nP~Wne~f~f~--~~~~~-~~~l~~~v~d~~~ 72 (123)
T cd04025 1 RLRCHVLEARDLAPKDRNGTSDPFVRVFYN-----GQTLETSVVKKSCYPRWNEVFEFE--LMEGA-DSPLSVEVWDWDL 72 (123)
T ss_pred CEEEEEEEeeCCCCCCCCCCcCceEEEEEC-----CEEEeceeecCCCCCccCcEEEEE--cCCCC-CCEEEEEEEECCC
Confidence 589999999 99999999999999999983 235789999999999999999998 65433 4459999999999
Q ss_pred CCCCCcccccccCcccccc
Q 005415 346 TRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 346 ~~~~d~~G~v~~~~~~~d~ 364 (697)
+++++++|.+.++..++..
T Consensus 73 ~~~~~~iG~~~~~l~~l~~ 91 (123)
T cd04025 73 VSKNDFLGKVVFSIQTLQQ 91 (123)
T ss_pred CCCCcEeEEEEEEHHHccc
Confidence 9999999999887665543
No 479
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.35 E-value=6.2e-13 Score=123.07 Aligned_cols=98 Identities=12% Similarity=0.074 Sum_probs=82.8
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
.+.+|+|.|.+| +|.++|..|.+|||||+++.++.....+++|+++++++||+|||+|.|.. ++.... ...|.++||
T Consensus 13 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~-~~~~~~~~~~l~~~v~ 91 (123)
T cd04035 13 ANSALHCTIIRAKGLKAMDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYG-ITEEDIQRKTLRLLVL 91 (123)
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcC-CCHHHhCCCEEEEEEE
Confidence 457899999999 99999999999999999999887666789999999999999999999963 333333 456999999
Q ss_pred cCCCCCCCCcccccccCccccc
Q 005415 342 DNSDTRDGEVNGALHEGKADAE 363 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d 363 (697)
|++.+ +++++|.++++..++.
T Consensus 92 d~~~~-~~~~iG~~~i~l~~l~ 112 (123)
T cd04035 92 DEDRF-GNDFLGETRIPLKKLK 112 (123)
T ss_pred EcCCc-CCeeEEEEEEEcccCC
Confidence 99998 8899999988665544
No 480
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.35 E-value=2.8e-13 Score=126.68 Aligned_cols=96 Identities=17% Similarity=0.088 Sum_probs=86.0
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEI 341 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~ 341 (697)
+.+.|+|.|.+| ||+++|..|..||||++.+.++..+..+++|++.+++.||.|||+|.|. ++...+ +..|.++||
T Consensus 12 ~~~~L~V~v~~a~~L~~~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~--i~~~~l~~~~l~~~v~ 89 (134)
T cd00276 12 TAERLTVVVLKARNLPPSDGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFD--VPAEQLEEVSLVITVV 89 (134)
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEE--CCHHHhCCcEEEEEEE
Confidence 457899999999 9999999999999999999998776678899999999999999999999 777665 455999999
Q ss_pred cCCCCCCCCcccccccCccc
Q 005415 342 DNSDTRDGEVNGALHEGKAD 361 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~ 361 (697)
|.+.+++++++|.+.++..+
T Consensus 90 d~~~~~~~~~lG~~~i~l~~ 109 (134)
T cd00276 90 DKDSVGRNEVIGQVVLGPDS 109 (134)
T ss_pred ecCCCCCCceeEEEEECCCC
Confidence 99999999999999888766
No 481
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.35 E-value=5.1e-13 Score=125.10 Aligned_cols=89 Identities=13% Similarity=0.020 Sum_probs=75.7
Q ss_pred eEEEEecc-Ccc--cccCCCC--CCcceEeeccCCCCCccccceeecccCCC--cceecccccCccccc-----------
Q 005415 268 GYLSSKEA-DLI--DLQHNVV--GDSSTDCDLAPHPGTEKSSSYSSSKRGSS--IDWIEGFKGSSDLHF----------- 329 (697)
Q Consensus 268 l~v~l~e~-~L~--~~d~~g~--sDpyVk~~l~pd~~~~~k~kt~v~k~tln--P~fnE~f~f~~~v~~----------- 329 (697)
|||+|-+| ++. .++.+|. +|||||++|.+. +..|+||.||.+++| |.||+.|.|+ ++.
T Consensus 2 LRViIw~~~~v~~~~~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~--~~~~~~~~~~~~~~ 77 (133)
T cd08374 2 LRVIVWNTRDVLNDDTNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFP--FDYLPAEKKIVVIK 77 (133)
T ss_pred EEEEEEECcCCcccccccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEe--eecCCccceeEEEe
Confidence 78999999 844 4455784 999999999998 445999999999999 9999999998 555
Q ss_pred ----------ccc-ccccccccccCCCCCCCCcccccccCcc
Q 005415 330 ----------KGA-EKDLMPAEIDNSDTRDGEVNGALHEGKA 360 (697)
Q Consensus 330 ----------~~~-~~~L~~~V~D~d~~~~~d~~G~v~~~~~ 360 (697)
+.+ ..+|.++|||.|++++++++|+++++..
T Consensus 78 ~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~ 119 (133)
T cd08374 78 KEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLS 119 (133)
T ss_pred eccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhh
Confidence 555 4559999999999999999999987654
No 482
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.35 E-value=5.4e-13 Score=121.98 Aligned_cols=79 Identities=10% Similarity=0.070 Sum_probs=67.1
Q ss_pred eEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccC---
Q 005415 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN--- 343 (697)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~--- 343 (697)
|+|+|++| ||+ |.+||||++.+.+.++...+.||++.++|+||+|||+|.|. ++ ..++|.+.|||+
T Consensus 1 L~V~V~~A~~L~-----~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~--l~---~s~~L~~~v~d~~~~ 70 (118)
T cd08686 1 LNVIVHSAQGFK-----QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIE--LE---GSQTLRILCYEKCYS 70 (118)
T ss_pred CEEEEEeCCCCC-----CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEE--eC---CCCEEEEEEEEcccc
Confidence 67999999 995 67999999999998766679999999999999999999998 64 244699999998
Q ss_pred ----CCCCCCCcccccc
Q 005415 344 ----SDTRDGEVNGALH 356 (697)
Q Consensus 344 ----d~~~~~d~~G~v~ 356 (697)
|.++.++.+|...
T Consensus 71 ~~~~d~~~~d~~~G~g~ 87 (118)
T cd08686 71 KVKLDGEGTDAIMGKGQ 87 (118)
T ss_pred cccccccCcccEEEEEE
Confidence 5677788886543
No 483
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.35 E-value=4.8e-13 Score=147.02 Aligned_cols=119 Identities=35% Similarity=0.510 Sum_probs=98.2
Q ss_pred CeEEEEEEcccc-chHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHHHHHhcCccccCCCCccccccccCcceEEEeeC
Q 005415 489 EHLFIVCELLRA-NLYEFQKFNQESGGEAYFTLGRLQVITRQCLEALEYLHSLGIIHCDLKPENILIKSYQRCEIKIIDL 567 (697)
Q Consensus 489 ~~l~LVmEyl~g-sL~~~l~~~~~~~~~~~ls~~~i~~i~~qIa~aL~yLHs~gIvHrDLKP~NILl~~~~~~~vKL~DF 567 (697)
.++||.|++|.. +|.+.+.... .... .++.....++.|++.|+.| ++.+|+|+||.||++.. +..+||.||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~-~~e~--~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~--d~q~kIgDF 400 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRR-TGEE--RSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSD--DDQLKIGDF 400 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCC-cccc--cchhHHHHHHHhhccchhh---ccchhhhcccccccccc--chhhhhhhh
Confidence 468999999984 5555554332 2222 6677889999999999999 99999999999999984 668999999
Q ss_pred CCccccccc---------cccccccCCCCCchhhcCCCCCchhhHHHHHHHHHHHHh
Q 005415 568 GSSCFQTDN---------LCLYVQSRSYRAPEVIIGLPYDQKIDLWSLGCILAELWT 615 (697)
Q Consensus 568 Gla~~~~~~---------~~~~~gt~~Y~APE~l~~~~~s~ksDIWSLGviL~ELlt 615 (697)
|+....... .+..+||..||+||.+.+..|+.++||||||+||+|++.
T Consensus 401 gl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 401 GLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 987554332 344688999999999999999999999999999999997
No 484
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.35 E-value=7.5e-13 Score=126.28 Aligned_cols=84 Identities=12% Similarity=0.067 Sum_probs=74.4
Q ss_pred cceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccC
Q 005415 265 NDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (697)
Q Consensus 265 ~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (697)
.+-|+|.|+.+ ||...|+.|.|||||-+.+- ..|.||++.++++||+|||.|+|. + .+....|.++|||+
T Consensus 5 vGLL~v~v~~g~~L~~rD~~~sSDPyVVl~lg-----~q~lkT~~v~~n~NPeWNe~ltf~--v--~d~~~~lkv~VyD~ 75 (168)
T KOG1030|consen 5 VGLLRVRVKRGKNLAIRDFLGSSDPYVVLELG-----NQKLKTRVVYKNLNPEWNEELTFT--V--KDPNTPLKVTVYDK 75 (168)
T ss_pred ceEEEEEEEeecCeeeeccccCCCCeEEEEEC-----CeeeeeeeecCCCCCcccceEEEE--e--cCCCceEEEEEEeC
Confidence 36789999999 99999999999999999996 568889999999999999999987 3 34445589999999
Q ss_pred CCCCCCCccccccc
Q 005415 344 SDTRDGEVNGALHE 357 (697)
Q Consensus 344 d~~~~~d~~G~v~~ 357 (697)
|.+++.|++|+..+
T Consensus 76 D~fs~dD~mG~A~I 89 (168)
T KOG1030|consen 76 DTFSSDDFMGEATI 89 (168)
T ss_pred CCCCcccccceeee
Confidence 99999999999855
No 485
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.33 E-value=8.1e-13 Score=122.00 Aligned_cols=89 Identities=12% Similarity=0.063 Sum_probs=75.5
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCC
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 345 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~ 345 (697)
.|+|.|++| +|+++|.+|.+||||++.+.. +..++|++.++|+||+|||+|.|. +.. ....|.++|||+|.
T Consensus 1 ~L~v~v~~a~~L~~~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~--v~~--~~~~l~~~v~D~d~ 72 (121)
T cd04042 1 QLDIHLKEGRNLAARDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLP--IED--VTQPLYIKVFDYDR 72 (121)
T ss_pred CeEEEEEEeeCCCCcCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEE--ecC--CCCeEEEEEEeCCC
Confidence 378999999 999999999999999999842 246788888999999999999998 542 34559999999999
Q ss_pred CCCCCcccccccCccccc
Q 005415 346 TRDGEVNGALHEGKADAE 363 (697)
Q Consensus 346 ~~~~d~~G~v~~~~~~~d 363 (697)
+++++++|.++++..+..
T Consensus 73 ~~~~~~iG~~~~~l~~l~ 90 (121)
T cd04042 73 GLTDDFMGSAFVDLSTLE 90 (121)
T ss_pred CCCCcceEEEEEEHHHcC
Confidence 999999999988654444
No 486
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.33 E-value=6.9e-13 Score=123.57 Aligned_cols=87 Identities=15% Similarity=0.039 Sum_probs=72.7
Q ss_pred eEEEEecc-C---cccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccC
Q 005415 268 GYLSSKEA-D---LIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (697)
Q Consensus 268 l~v~l~e~-~---L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (697)
|+|.|.+| | |.++|..|.+||||++.+- ..+.+|++.++++||+|||+|.|. +.. ....|.++|||.
T Consensus 2 L~v~v~~A~~~~~l~~~d~~g~sDPYv~i~~g-----~~~~rTk~~~~~~nP~WnE~f~f~--v~~--~~~~l~v~V~d~ 72 (126)
T cd08379 2 LEVGILGAQGLDVLRAKDGRGSTDAYCVAKYG-----PKWVRTRTVEDSSNPRWNEQYTWP--VYD--PCTVLTVGVFDN 72 (126)
T ss_pred eEEEEEEeECCccccccccCCCCCeeEEEEEC-----CEEeEcCcccCCCCCcceeEEEEE--ecC--CCCEEEEEEEEC
Confidence 78999999 9 9999999999999999973 236689999999999999999998 532 223699999999
Q ss_pred CCCC------CCCcccccccCccccc
Q 005415 344 SDTR------DGEVNGALHEGKADAE 363 (697)
Q Consensus 344 d~~~------~~d~~G~v~~~~~~~d 363 (697)
+.++ .++++|++.+...++.
T Consensus 73 d~~~~~~~~~~dd~lG~~~i~l~~l~ 98 (126)
T cd08379 73 SQSHWKEAVQPDVLIGKVRIRLSTLE 98 (126)
T ss_pred CCccccccCCCCceEEEEEEEHHHcc
Confidence 9884 7999999987644443
No 487
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.32 E-value=1.2e-12 Score=122.69 Aligned_cols=95 Identities=15% Similarity=0.097 Sum_probs=79.1
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccCC--CCCccccceeecccCCCcceecccccCccccccccccccccccccC
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPH--PGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd--~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (697)
.|+|.|.+| +|.++|..|.+||||++.+... .+...+.+|++.++|+||.|||+|.|. +... ...|.++|||+
T Consensus 1 ~L~v~Vi~a~~L~~~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~--~~~~--~~~l~~~v~d~ 76 (133)
T cd04033 1 ILRVKVLAGIDLAKKDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFR--VNPR--EHRLLFEVFDE 76 (133)
T ss_pred CEEEEEEEeECCCcccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEE--EcCC--CCEEEEEEEEC
Confidence 378999999 9999999999999999999865 223346789999999999999999998 5543 34589999999
Q ss_pred CCCCCCCcccccccCccccccc
Q 005415 344 SDTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 344 d~~~~~d~~G~v~~~~~~~d~e 365 (697)
+.+++++++|.+.+...+....
T Consensus 77 ~~~~~~~~iG~~~i~l~~l~~~ 98 (133)
T cd04033 77 NRLTRDDFLGQVEVPLNNLPTE 98 (133)
T ss_pred CCCCCCCeeEEEEEEHHHCCCc
Confidence 9999999999998876555543
No 488
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.32 E-value=9.5e-13 Score=126.49 Aligned_cols=90 Identities=20% Similarity=0.146 Sum_probs=75.6
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeeccc-CCCcceecccccCccccccccccccccccccCC
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKR-GSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNS 344 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~-tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d 344 (697)
+|+|.|.+| +|+++|.+|.+||||++.+.. .+.+|++.++ |+||+|||+|.|. ++.. ....|.+.|||++
T Consensus 1 ~L~V~Vi~A~~L~~~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~--v~~~-~~~~l~v~V~d~~ 72 (150)
T cd04019 1 YLRVTVIEAQDLVPSDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFV--AAEP-FEDHLILSVEDRV 72 (150)
T ss_pred CEEEEEEEeECCCCCCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEE--ecCc-cCCeEEEEEEEec
Confidence 689999999 999999999999999999963 4667777655 7999999999998 6432 2345899999999
Q ss_pred CCCCCCcccccccCcccccc
Q 005415 345 DTRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 345 ~~~~~d~~G~v~~~~~~~d~ 364 (697)
..++++++|.+.++..++..
T Consensus 73 ~~~~dd~lG~v~i~L~~l~~ 92 (150)
T cd04019 73 GPNKDEPLGRAVIPLNDIER 92 (150)
T ss_pred CCCCCCeEEEEEEEHHHCcc
Confidence 99999999999888766543
No 489
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.32 E-value=1.4e-12 Score=120.68 Aligned_cols=85 Identities=8% Similarity=-0.044 Sum_probs=71.3
Q ss_pred ceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeeccc-CCCcceecccccCccccccccccccccccccC
Q 005415 266 DYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKR-GSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (697)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~-tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (697)
+.|+|.|.+| +|+.++ -|.+||||++.+- .++.+|++.++ ++||+|||+|.|. +... ...|.++|||.
T Consensus 2 g~L~v~v~~Ak~l~~~~-~g~sDPYv~i~lg-----~~~~kT~v~~~~~~nP~WNe~F~f~--v~~~--~~~l~~~V~d~ 71 (121)
T cd04016 2 GRLSITVVQAKLVKNYG-LTRMDPYCRIRVG-----HAVYETPTAYNGAKNPRWNKTIQCT--LPEG--VDSIYIEIFDE 71 (121)
T ss_pred cEEEEEEEEccCCCcCC-CCCCCceEEEEEC-----CEEEEeEEccCCCCCCccCeEEEEE--ecCC--CcEEEEEEEeC
Confidence 5789999999 888777 6899999999993 24678988655 8999999999998 6543 23499999999
Q ss_pred CCCCCCCcccccccCcc
Q 005415 344 SDTRDGEVNGALHEGKA 360 (697)
Q Consensus 344 d~~~~~d~~G~v~~~~~ 360 (697)
|.+++++++|++.....
T Consensus 72 d~~~~dd~iG~~~i~l~ 88 (121)
T cd04016 72 RAFTMDERIAWTHITIP 88 (121)
T ss_pred CCCcCCceEEEEEEECc
Confidence 99999999999877653
No 490
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.31 E-value=1.2e-12 Score=126.03 Aligned_cols=99 Identities=14% Similarity=0.087 Sum_probs=79.7
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCc------------------------cccceeecccCCCccee
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTE------------------------KSSSYSSSKRGSSIDWI 318 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~------------------------~k~kt~v~k~tlnP~fn 318 (697)
+...|+|.|.+| +|.++|.+|.+||||++.+.+..++. ..++|.++++|+||.||
T Consensus 26 ~~~~L~V~vi~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~Wn 105 (153)
T cd08676 26 PIFVLKVTVIEAKGLLAKDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQTLNPVWN 105 (153)
T ss_pred CeEEEEEEEEeccCCcccCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCCCCCccc
Confidence 557899999999 99999999999999999998754321 23678899999999999
Q ss_pred cccccCccccccccccccccccccCCCCCCCCcccccccCcccccccCCCC
Q 005415 319 EGFKGSSDLHFKGAEKDLMPAEIDNSDTRDGEVNGALHEGKADAEEHGVAT 369 (697)
Q Consensus 319 E~f~f~~~v~~~~~~~~L~~~V~D~d~~~~~d~~G~v~~~~~~~d~e~~~~ 369 (697)
|+|.|. +... ....|.++|||++ ++++|++.++..++...+...
T Consensus 106 E~F~f~--v~~~-~~~~L~i~V~D~d----d~~IG~v~i~l~~l~~~~~d~ 149 (153)
T cd08676 106 ETFRFE--VEDV-SNDQLHLDIWDHD----DDFLGCVNIPLKDLPSCGLDS 149 (153)
T ss_pred cEEEEE--eccC-CCCEEEEEEEecC----CCeEEEEEEEHHHhCCCCCCC
Confidence 999998 5432 2445999999998 889999988776666444433
No 491
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.31 E-value=1.9e-12 Score=120.21 Aligned_cols=90 Identities=11% Similarity=-0.039 Sum_probs=76.0
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCC
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSD 345 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~ 345 (697)
.++|.|.+| +|+++|.+|.+||||++++...+ ..+.||++.++++||.|||+|.|. ++.. ....|.++|||++.
T Consensus 2 ~~~V~v~~a~~L~~~~~~~~~Dpyv~v~~~~~~--~~~~kT~~~~~t~~P~Wne~f~f~--i~~~-~~~~L~i~v~d~d~ 76 (126)
T cd04043 2 LFTIRIVRAENLKADSSNGLSDPYVTLVDTNGK--RRIAKTRTIYDTLNPRWDEEFELE--VPAG-EPLWISATVWDRSF 76 (126)
T ss_pred EEEEEEEEeECCCCCCCCCCCCceEEEEECCCC--eeeecccEecCCCCCcccceEEEE--cCCC-CCCEEEEEEEECCC
Confidence 578999999 99999999999999999875443 236789999999999999999998 6654 34459999999999
Q ss_pred CCCCCcccccccCccc
Q 005415 346 TRDGEVNGALHEGKAD 361 (697)
Q Consensus 346 ~~~~d~~G~v~~~~~~ 361 (697)
+++++++|++.+....
T Consensus 77 ~~~~~~iG~~~i~l~~ 92 (126)
T cd04043 77 VGKHDLCGRASLKLDP 92 (126)
T ss_pred CCCCceEEEEEEecCH
Confidence 9999999999876543
No 492
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.30 E-value=1.6e-12 Score=122.91 Aligned_cols=94 Identities=12% Similarity=0.010 Sum_probs=78.7
Q ss_pred cccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccc
Q 005415 263 INNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEI 341 (697)
Q Consensus 263 ~s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~ 341 (697)
...+.|+|.|.+| +|.++|..|.+||||++.+. ..+++|+++++|+||.|||+|.|. +... ....|.++||
T Consensus 12 ~~~G~L~V~Vi~A~~L~~~d~~g~~DPYv~v~~~-----~~~~kT~vi~~t~nP~Wne~f~f~--v~~~-~~~~l~i~V~ 83 (136)
T cd08375 12 SGIGRLMVVIVEGRDLKPCNSNGKSDPYCEVSMG-----SQEHKTKVVSDTLNPKWNSSMQFF--VKDL-EQDVLCITVF 83 (136)
T ss_pred CCcEEEEEEEEEeeCCCCCCCCCCcCcEEEEEEC-----CEeeeccccCCCCCCccCceEEEE--ecCc-cCCEEEEEEE
Confidence 3557899999999 99999999999999999983 346889999999999999999998 5432 2345999999
Q ss_pred cCCCCCCCCcccccccCcccccc
Q 005415 342 DNSDTRDGEVNGALHEGKADAEE 364 (697)
Q Consensus 342 D~d~~~~~d~~G~v~~~~~~~d~ 364 (697)
|.|.+++++++|.+.....+...
T Consensus 84 D~d~~~~d~~lG~~~i~l~~l~~ 106 (136)
T cd08375 84 DRDFFSPDDFLGRTEIRVADILK 106 (136)
T ss_pred ECCCCCCCCeeEEEEEEHHHhcc
Confidence 99999999999999776544443
No 493
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.30 E-value=2.2e-12 Score=120.75 Aligned_cols=104 Identities=21% Similarity=0.249 Sum_probs=88.1
Q ss_pred ccceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccccccccccccc
Q 005415 264 NNDYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 342 (697)
Q Consensus 264 s~~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D 342 (697)
..+.++|.|.+| +|++.|..|..||||++.+.+...+..+++|++.++++||.|||+|.|. +........|.++|||
T Consensus 11 ~~~~l~v~i~~a~nL~~~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~--~~~~~~~~~l~v~v~d 88 (131)
T cd04026 11 KDNKLTVEVREAKNLIPMDPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFD--LKPADKDRRLSIEVWD 88 (131)
T ss_pred CCCEEEEEEEEeeCCCCcCCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEe--CCchhcCCEEEEEEEE
Confidence 337899999999 9999999999999999999987766678899999999999999999998 6654455669999999
Q ss_pred CCCCCCCCcccccccCcccccccCCCC
Q 005415 343 NSDTRDGEVNGALHEGKADAEEHGVAT 369 (697)
Q Consensus 343 ~d~~~~~d~~G~v~~~~~~~d~e~~~~ 369 (697)
++.+++++++|.++.+..+........
T Consensus 89 ~~~~~~~~~iG~~~~~l~~l~~~~~~~ 115 (131)
T cd04026 89 WDRTTRNDFMGSLSFGVSELIKMPVDG 115 (131)
T ss_pred CCCCCCcceeEEEEEeHHHhCcCccCc
Confidence 999999999999988766665443333
No 494
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.29 E-value=2.4e-12 Score=119.60 Aligned_cols=87 Identities=11% Similarity=-0.031 Sum_probs=72.1
Q ss_pred eEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCCC
Q 005415 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 346 (697)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~~ 346 (697)
++|.|.+| +|.++|..|.+||||++.+...+ .+.||.+.++|+||+|||+|.|. +.... ...|.++|||+|.+
T Consensus 2 lrV~Vi~a~~L~~~d~~g~~DPYv~v~~~~~~---~~~kT~~v~~t~nP~Wne~f~f~--~~~~~-~~~L~~~V~d~d~~ 75 (124)
T cd04037 2 VRVYVVRARNLQPKDPNGKSDPYLKIKLGKKK---INDRDNYIPNTLNPVFGKMFELE--ATLPG-NSILKISVMDYDLL 75 (124)
T ss_pred EEEEEEECcCCCCCCCCCCCCcEEEEEECCee---ccceeeEEECCCCCccceEEEEE--ecCCC-CCEEEEEEEECCCC
Confidence 78999999 99999999999999999995432 34667777889999999999997 43221 34599999999999
Q ss_pred CCCCcccccccCcc
Q 005415 347 RDGEVNGALHEGKA 360 (697)
Q Consensus 347 ~~~d~~G~v~~~~~ 360 (697)
++++++|++.....
T Consensus 76 ~~dd~iG~~~i~l~ 89 (124)
T cd04037 76 GSDDLIGETVIDLE 89 (124)
T ss_pred CCCceeEEEEEeec
Confidence 99999999977553
No 495
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.27 E-value=3.1e-12 Score=118.30 Aligned_cols=87 Identities=13% Similarity=0.024 Sum_probs=73.5
Q ss_pred eEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCCC
Q 005415 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 346 (697)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~~ 346 (697)
|+|.|.+| +|.++|.+|.+||||++.+. + ....||+++++|+||+|||.|.|. ++.. .+.|.+.|||.+.+
T Consensus 2 l~v~vi~a~~L~~~d~~g~~DPYv~v~~~--~--~~~~kT~v~~~t~nP~Wne~f~~~--~~~~--~~~l~v~v~d~~~~ 73 (121)
T cd04054 2 LYIRIVEGKNLPAKDITGSSDPYCIVKVD--N--EVIIRTATVWKTLNPFWGEEYTVH--LPPG--FHTVSFYVLDEDTL 73 (121)
T ss_pred EEEEEEEeeCCcCCCCCCCCCceEEEEEC--C--EeeeeeeeEcCCCCCcccceEEEe--eCCC--CCEEEEEEEECCCC
Confidence 78999999 99999999999999999983 2 224689999999999999999998 5432 34599999999999
Q ss_pred CCCCcccccccCcccc
Q 005415 347 RDGEVNGALHEGKADA 362 (697)
Q Consensus 347 ~~~d~~G~v~~~~~~~ 362 (697)
++++++|.+.++....
T Consensus 74 ~~d~~iG~~~~~~~~~ 89 (121)
T cd04054 74 SRDDVIGKVSLTREVI 89 (121)
T ss_pred CCCCEEEEEEEcHHHh
Confidence 9999999998875433
No 496
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.27 E-value=2.8e-12 Score=117.60 Aligned_cols=88 Identities=13% Similarity=0.097 Sum_probs=72.6
Q ss_pred ceeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeec-ccCCCcceecccccCccccccccccccccccccC
Q 005415 266 DYGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSS-KRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDN 343 (697)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~-k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~ 343 (697)
+.|+|.|.+| +|+++|..|.+||||++.+.. .+++|++. +.++||+|||+|.|. ++.. ....|.++|||+
T Consensus 1 g~L~V~v~~A~~L~~~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~--v~~~-~~~~l~i~v~d~ 72 (118)
T cd08681 1 GTLVVVVLKARNLPNKRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFE--ITED-KKPILKVAVFDD 72 (118)
T ss_pred CEEEEEEEEccCCCCCCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEE--ecCC-CCCEEEEEEEeC
Confidence 4689999999 999999999999999999864 35567664 568999999999998 6654 234599999999
Q ss_pred CCCCCCCcccccccCcccc
Q 005415 344 SDTRDGEVNGALHEGKADA 362 (697)
Q Consensus 344 d~~~~~d~~G~v~~~~~~~ 362 (697)
+..+ ++++|++.++..++
T Consensus 73 ~~~~-~~~iG~~~~~l~~~ 90 (118)
T cd08681 73 DKRK-PDLIGDTEVDLSPA 90 (118)
T ss_pred CCCC-CcceEEEEEecHHH
Confidence 9877 89999998865544
No 497
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.27 E-value=3.3e-12 Score=116.12 Aligned_cols=90 Identities=13% Similarity=0.017 Sum_probs=74.5
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccc-ccccccccccCC
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGA-EKDLMPAEIDNS 344 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~-~~~L~~~V~D~d 344 (697)
.++|.|.+| +|. +|..||||++.+.. .++||+++++|+||.|||+|.|....+...+ +..|.++|||.+
T Consensus 5 ~l~V~v~~a~~L~----~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~i~V~d~~ 75 (111)
T cd04011 5 QVRVRVIEARQLV----GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIKISVYDSR 75 (111)
T ss_pred EEEEEEEEcccCC----CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEEEEEEcCc
Confidence 578999999 998 78899999999972 3568999999999999999999843444444 455999999999
Q ss_pred CCCCCCcccccccCccccccc
Q 005415 345 DTRDGEVNGALHEGKADAEEH 365 (697)
Q Consensus 345 ~~~~~d~~G~v~~~~~~~d~e 365 (697)
.+++++++|++.+...+....
T Consensus 76 ~~~~~~~iG~~~i~l~~v~~~ 96 (111)
T cd04011 76 SLRSDTLIGSFKLDVGTVYDQ 96 (111)
T ss_pred ccccCCccEEEEECCccccCC
Confidence 999999999999887665443
No 498
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.27 E-value=4.5e-12 Score=119.54 Aligned_cols=86 Identities=14% Similarity=0.038 Sum_probs=71.4
Q ss_pred eeEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcc-cc--cccc---ccccccc
Q 005415 267 YGYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSD-LH--FKGA---EKDLMPA 339 (697)
Q Consensus 267 ~l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~-v~--~~~~---~~~L~~~ 339 (697)
+|+|.|.+| +|.++|.+|.+|||||+.+. ..++||+++++|+||+|||+|.|... +. .+.. ...|.++
T Consensus 2 ~l~v~V~~a~~L~~~d~~g~~dpyv~v~~~-----~~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~~~l~v~ 76 (135)
T cd04017 2 QLRAYIYQARDLLAADKSGLSDPFARVSFL-----NQSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNPPLVVVE 76 (135)
T ss_pred EEEEEEEEeecCcCCCCCCCCCCEEEEEEC-----CeeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCCCEEEEE
Confidence 578999999 99999999999999999985 24778999999999999999999721 11 1111 2348899
Q ss_pred cccCCCCCCCCccccccc
Q 005415 340 EIDNSDTRDGEVNGALHE 357 (697)
Q Consensus 340 V~D~d~~~~~d~~G~v~~ 357 (697)
|||+|.+++++++|++..
T Consensus 77 V~d~d~~~~d~~iG~~~i 94 (135)
T cd04017 77 LFDQDSVGKDEFLGRSVA 94 (135)
T ss_pred EEeCcCCCCCccceEEEe
Confidence 999999999999999975
No 499
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.26 E-value=3.8e-12 Score=118.18 Aligned_cols=90 Identities=10% Similarity=-0.027 Sum_probs=76.6
Q ss_pred ceeEEEEecc-CcccccC--CCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCcccccccccccccccccc
Q 005415 266 DYGYLSSKEA-DLIDLQH--NVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEID 342 (697)
Q Consensus 266 ~~l~v~l~e~-~L~~~d~--~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D 342 (697)
+.|+|.|.+| +|.++|. .|.+||||++++- ..+.+|++.++|+||.|||+|.|. +.. .....|.++|||
T Consensus 1 g~l~v~v~~a~~L~~~~~~~~~~~dPyv~v~~~-----~~~~kT~~~~~t~~P~Wne~f~~~--~~~-~~~~~l~i~v~d 72 (128)
T cd04024 1 GVLRVHVVEAKDLAAKDRSGKGKSDPYAILSVG-----AQRFKTQTIPNTLNPKWNYWCEFP--IFS-AQNQLLKLILWD 72 (128)
T ss_pred CEEEEEEEEeeCCCcccCCCCCCcCCeEEEEEC-----CEEEecceecCCcCCccCCcEEEE--ecC-CCCCEEEEEEEE
Confidence 4688999999 9999999 8999999999983 246789999999999999999998 554 234569999999
Q ss_pred CCCCCCCCcccccccCccccc
Q 005415 343 NSDTRDGEVNGALHEGKADAE 363 (697)
Q Consensus 343 ~d~~~~~d~~G~v~~~~~~~d 363 (697)
++.+++++++|.+.+...+..
T Consensus 73 ~~~~~~~~~lG~~~i~l~~~~ 93 (128)
T cd04024 73 KDRFAGKDYLGEFDIALEEVF 93 (128)
T ss_pred CCCCCCCCcceEEEEEHHHhh
Confidence 999999999999988765554
No 500
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein. The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a
Probab=99.25 E-value=4.3e-12 Score=118.09 Aligned_cols=87 Identities=17% Similarity=0.114 Sum_probs=72.5
Q ss_pred eEEEEecc-CcccccCCCCCCcceEeeccCCCCCccccceeecccCCCcceecccccCccccccccccccccccccCCCC
Q 005415 268 GYLSSKEA-DLIDLQHNVVGDSSTDCDLAPHPGTEKSSSYSSSKRGSSIDWIEGFKGSSDLHFKGAEKDLMPAEIDNSDT 346 (697)
Q Consensus 268 l~v~l~e~-~L~~~d~~g~sDpyVk~~l~pd~~~~~k~kt~v~k~tlnP~fnE~f~f~~~v~~~~~~~~L~~~V~D~d~~ 346 (697)
|.|.|.+| ||++ .+|.+||||++++. ....+++|+++++|+||+|||+|.|. +... ...|.+.|||++..
T Consensus 1 l~v~v~~A~~L~~--~~g~~dpyv~v~~~---~~~~~~kT~v~~~t~nP~Wne~f~f~--~~~~--~~~l~~~v~d~~~~ 71 (126)
T cd08678 1 LLVKNIKANGLSE--AAGSSNPYCVLEMD---EPPQKYQSSTQKNTSNPFWDEHFLFE--LSPN--SKELLFEVYDNGKK 71 (126)
T ss_pred CEEEEEEecCCCC--CCCCcCCEEEEEEC---CCCcEEEeEEEecCCCCccCceEEEE--eCCC--CCEEEEEEEECCCC
Confidence 57889999 9998 78999999999984 12346899999999999999999998 6432 34599999999999
Q ss_pred CCCCcccccccCccccc
Q 005415 347 RDGEVNGALHEGKADAE 363 (697)
Q Consensus 347 ~~~d~~G~v~~~~~~~d 363 (697)
++++++|.+.....++.
T Consensus 72 ~~~~~lG~~~i~l~~l~ 88 (126)
T cd08678 72 SDSKFLGLAIVPFDELR 88 (126)
T ss_pred CCCceEEEEEEeHHHhc
Confidence 99999999988655444
Done!